BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002772
         (882 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score = 1342 bits (3473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/878 (73%), Positives = 741/878 (84%), Gaps = 11/878 (1%)

Query: 13  SPPLSSLQTHQPPAT--------TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS 64
           SPP  SLQT  PP+         T+ + P P S +R   SW+++LRS  RSN FREAI +
Sbjct: 22  SPP--SLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIST 79

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           YIEMT S  +PDNFAFPAVLKAV+G+QDL  G+QIHA  VK+GYG SSVTVANTLVNMYG
Sbjct: 80  YIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYG 139

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           KCG  + DV KVFDRIT++DQVSWNS IA LCRF KW+ ALEAFR M   N+E SSFTLV
Sbjct: 140 KCGG-IGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLV 198

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           SVALACSNL    GLRLG+Q+HG SLRVG+  TF  NALMAMYAKLGRVDD+K LF+SF 
Sbjct: 199 SVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFV 258

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           DRD+VSWNT++SS SQ+D+F EA+ F R M L G++ DGV+IASVLPACSHLE LD GKE
Sbjct: 259 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 318

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHAY LRN+ LI+NSFVGSALVDMYCNCR+VE GRRVFD I  ++I LWNAMI+GY +N 
Sbjct: 319 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 378

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            DE+AL+LFI+M +VAGL PN TTM+SV+PACV  EAF +KE IHG+A+KLG   DRYVQ
Sbjct: 379 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQ 438

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NALMDMYSRMG+++IS+TIFD MEVRD VSWNTMITGY + G++ +AL+LL EMQ ME  
Sbjct: 439 NALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENT 498

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
           K+     + DE     KPN+ITLMTVLPGC AL+A+AKGKEIHAYAIRNMLA+D+ VGSA
Sbjct: 499 KDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSA 558

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LVDMYAKCGCLN +RRVF+ MP +NVITWNV+IMA GMHG+G+E LEL KNMVAE  RGG
Sbjct: 559 LVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGG 618

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
           E KPNEVTFI +FAACSHSG++SEG++LFY+MK D+G+EP+ DHYACVVDLLGRAG++E+
Sbjct: 619 EAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEE 678

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           AY+L+N MP EFDK GAWSSLLGACRIHQNVE+GE+AA+NL  LEP+VASHYVLLSNIYS
Sbjct: 679 AYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 738

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           SA LW+KAM+VRK M++MGV+KEPGCSWIEF DE+HKF+AGD SH QSEQLHGFLE LSE
Sbjct: 739 SAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSE 798

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           +MRKEGYVPDTSCVLHNV+E+EKE LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND
Sbjct: 799 KMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 858

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH ATKFISKI  REII+RDVRRFHHFK GTCSCGDYW
Sbjct: 859 CHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score = 1294 bits (3348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/816 (74%), Positives = 705/816 (86%), Gaps = 3/816 (0%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG-LSSVTVANTLVNMYGKC 126
           M  S   PDNFAFPAVLKAVAGIQ+L LGKQIHAHV K+GYG  SSVT+ NTLVNMYGKC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G  + D YKVFDRITE+DQVSWNS+I+ LCRF +W++A++AFR+ML    EPSSFTLVS+
Sbjct: 61  GG-LGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM 119

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           ALACSNL +RDGL LG+Q+HG   R G W TF  NALMAMYAKLGR+DDAK+L   FEDR
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           DLV+WN+++SS SQN++F+EA+MFLR M L G+KPDGV+ ASVLPACSHL++L TGKEIH
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           AYALR D +I+NSFVGSALVDMYCNC +VE GR VFD + D+KI LWNAMI GY Q+E+D
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           E+ALMLFI+ME  AGL+ NATTMSS+VPA VR E    KEGIHG+ IK GL  +RY+QNA
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMYSRMG I+ SK IFD ME RD VSWNT+IT Y ICG+  DAL+LL EMQ +EE+  
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
            +  Y+ DE  +  KPNSITLMTVLPGC +LSALAKGKEIHAYAIRN+LA+ V VGSALV
Sbjct: 420 YDGDYN-DEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALV 478

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMYAKCGCLN ARRVFD MP+RNVITWNVIIMAYGMHG+G+E LEL ++MVAEG++GGEV
Sbjct: 479 DMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEV 538

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           KP EVTFIALFA+CSHSGMV EG+ LF+KMK+++GIEP+PDHYAC+VDL+GRAGKVE+AY
Sbjct: 539 KPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAY 598

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
            L+N MP  FDK GAWSSLLGACRI+ N+EIGEIAA+NL  L+PDVASHYVLLSNIYSSA
Sbjct: 599 GLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSA 658

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
            LWDKAM++R++MK MGV+KEPGCSWIE+GDE+HKFLAGD SH QSE+LH FLE LSER+
Sbjct: 659 GLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERL 718

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           +KEGYVPDT+CVLH+++EEEKET+LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH
Sbjct: 719 KKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 778

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            A+KFISKIE REIILRD RRFHHFK+GTCSCGDYW
Sbjct: 779 TASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 231/469 (49%), Gaps = 53/469 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S +++ +F EA++    M    ++PD   F +VL A + +  L  GK+IHA+ 
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++    + +  V + LV+MY  CG  +     VFD + ++    WN+MIA   +    + 
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQ-VESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEK 301

Query: 164 ALEAFRMM-----LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           AL  F  M     LYSN    S ++V   + C  +SR++G      +HG  ++ G E N 
Sbjct: 302 ALMLFIEMEAAAGLYSNATTMS-SIVPAYVRCEGISRKEG------IHGYVIKRGLETNR 354

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--- 274
           ++ NAL+ MY+++G +  +K +F S EDRD+VSWNTI++S     +  +A++ L +M   
Sbjct: 355 YLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRI 414

Query: 275 ----ALRG---------IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                  G          KP+ +++ +VLP C+ L  L  GKEIHAYA+RN +L     V
Sbjct: 415 EEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN-LLASQVTV 473

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEV 379
           GSALVDMY  C  +   RRVFD +  + +  WN +I  YG +   +E+L LF  M  E  
Sbjct: 474 GSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGA 533

Query: 380 AG--LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSR 433
            G  + P   T  ++  +C  S    +   +  H +K   G     D Y    ++D+  R
Sbjct: 534 KGGEVKPTEVTFIALFASCSHSGMVDEGLSLF-HKMKNEHGIEPAPDHYA--CIVDLVGR 590

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            G++E +  +            NTM +G+   G     L   R   N+E
Sbjct: 591 AGKVEEAYGLV-----------NTMPSGFDKVGAWSSLLGACRIYHNIE 628


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/886 (67%), Positives = 712/886 (80%), Gaps = 26/886 (2%)

Query: 11  LPSPPLSSLQTHQPPATTATSLPLPG--------------SQTRCKESWIESLRSEARSN 56
            PS PL   +   P    AT   +                SQ+   E WI+ LRS+ RSN
Sbjct: 13  FPSQPLPFSRQKHPYLLRATPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSN 72

Query: 57  QFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
             REA+L+YI+M    I+PDNFAFPA+LKAVA +QD+ LGKQIHAHV K+GYG+ SVTVA
Sbjct: 73  LLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVA 132

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NTLVN+Y KCG D   VYKVFDRI+E++QVSWNS+I++LC F KW++ALEAFR ML  +V
Sbjct: 133 NTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDV 191

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
           EPSSFTLVSVALACSN    +GL +G+QVH   LR GE N+FI+N L+AMY K+G++  +
Sbjct: 192 EPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASS 251

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           K L  SFE RDLV+WNT++SSL QN++FLEA+ +LR+M L G++PDG +I+SVLPACSHL
Sbjct: 252 KVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHL 311

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           EML TGKE+HAYAL+N  L +NSFVGSALVDMYCNC++V  G RVFD + D+KI LWNAM
Sbjct: 312 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAM 371

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           ITGY QNEYDEEAL+LFI+MEE AGL  N+TTM+ VVPACVRS AF  KE IHG  +K G
Sbjct: 372 ITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRG 431

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           L RDR+VQNALMDMYSR+G+I+I+K IF  ME RD V+WNT+ITGY    +H DAL++L 
Sbjct: 432 LDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLH 491

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           +MQ +E + +         + +  KPNSITLMT+LP C ALSALAKGKEIHAYAI+N LA
Sbjct: 492 KMQILERKASER------ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 545

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           TDV VGSALVDMYAKCGCL  +R+VFD +P+RNVITWNVI+MAYGMHG  Q+ +++L+ M
Sbjct: 546 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMM 605

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           + +G     VKPNEVTFI++FAACSHSGMV+EG+ +FY MK DYG+EPS DHYACVVDLL
Sbjct: 606 MVQG-----VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLL 660

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG+V++AYQLIN++P  FDKAGAWSSLLGACRIH N+EIGEIAAQNL  LEP+VASHY
Sbjct: 661 GRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHY 720

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLL+NIYSSA LW KA +VR+ MK  GVRKEPGCSWIE GDE+HKF+AGD SH QSE+L 
Sbjct: 721 VLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLR 780

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
           G+LE L ERMRKEGY+PDTSCVLHNV E+EKE LLCGHSEKLAIAFGILNT PGT IRVA
Sbjct: 781 GYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 840

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVCNDCH ATKFISK+  REIILRDVRRFHHFKNGTCSCGDYW
Sbjct: 841 KNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score = 1249 bits (3231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/873 (68%), Positives = 710/873 (81%), Gaps = 14/873 (1%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           LL + P S+ +      + A S+ +  SQ+R  E WI+ LRS+ RSN  REA+L+Y++M 
Sbjct: 32  LLRATPTSATEDVASAVSGAPSIFI--SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI 89

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
              I+PDN+AFPA+LKAVA +QD+ LGKQIHAHV K+GYG+ SVTVANTLVN+Y KCG D
Sbjct: 90  VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-D 148

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
              VYKVFDRI+E++QVSWNS+I++LC F KW++ALEAFR ML  NVEPSSFTLVSV  A
Sbjct: 149 FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA 208

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           CSNL   +GL +G+QVH   LR GE N+FI+N L+AMY KLG++  +K L  SF  RDLV
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +WNT++SSL QN++ LEA+ +LR+M L G++PD  +I+SVLPACSHLEML TGKE+HAYA
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L+N  L +NSFVGSALVDMYCNC++V  GRRVFD + D+KI LWNAMI GY QNE+D+EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L+LFI MEE AGL  N+TTM+ VVPACVRS AF  KE IHG  +K GL RDR+VQN LMD
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MYSR+G+I+I+  IF  ME RD V+WNTMITGY     H DAL+LL +MQN+E + ++  
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG- 507

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                 + +  KPNSITLMT+LP C ALSALAKGKEIHAYAI+N LATDV VGSALVDMY
Sbjct: 508 -----ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCGCL  +R+VFD +P +NVITWNVIIMAYGMHG GQE ++LL+ M+ +G     VKPN
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-----VKPN 617

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           EVTFI++FAACSHSGMV EG+ +FY MK DYG+EPS DHYACVVDLLGRAG++++AYQL+
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           NMMP +F+KAGAWSSLLGA RIH N+EIGEIAAQNL  LEP+VASHYVLL+NIYSSA LW
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           DKA +VR+ MKE GVRKEPGCSWIE GDE+HKF+AGD SH QSE+L G+LE L ERMRKE
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVPDTSCVLHNV E+EKE LLCGHSEKLAIAFGILNT PGT IRVAKNLRVCNDCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KFISKI  REIILRDVRRFH FKNGTCSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score = 1248 bits (3230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/873 (68%), Positives = 710/873 (81%), Gaps = 14/873 (1%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           LL + P S+ +      + A S+ +  SQ+R  E WI+ LRS+ RSN  REA+L+Y++M 
Sbjct: 32  LLRATPTSATEDVASAVSGAPSIFI--SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI 89

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
              I+PDN+AFPA+LKAVA +QD+ LGKQIHAHV K+GYG+ SVTVANTLVN+Y KCG D
Sbjct: 90  VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-D 148

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
              VYKVFDRI+E++QVSWNS+I++LC F KW++ALEAFR ML  NVEPSSFTLVSV  A
Sbjct: 149 FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA 208

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           CSNL   +GL +G+QVH   LR GE N+FI+N L+AMY KLG++  +K L  SF  RDLV
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +WNT++SSL QN++ LEA+ +LR+M L G++PD  +I+SVLPACSHLEML TGKE+HAYA
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L+N  L +NSFVGSALVDMYCNC++V  GRRVFD + D+KI LWNAMI GY QNE+D+EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L+LFI MEE AGL  N+TTM+ VVPACVRS AF  KE IHG  +K GL RDR+VQN LMD
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MYSR+G+I+I+  IF  ME RD V+WNTMITGY     H DAL+LL +MQN+E + ++  
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG- 507

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                 + +  KPNSITLMT+LP C ALSALAKGKEIHAYAI+N LATDV VGSALVDMY
Sbjct: 508 -----ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCGCL  +R+VFD +P +NVITWNVIIMAYGMHG GQE ++LL+ M+ +G     VKPN
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-----VKPN 617

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           EVTFI++FAACSHSGMV EG+ +FY MK DYG+EPS DHYACVVDLLGRAG++++AYQL+
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           NMMP +F+KAGAWSSLLGA RIH N+EIGEIAAQNL  LEP+VASHYVLL+NIYSSA LW
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           DKA +VR+ MKE GVRKEPGCSWIE GDE+HKF+AGD SH QSE+L G+LE L ERMRKE
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVPDTSCVLHNV E+EKE LLCGHSEKLAIAFGILNT PGT IRVAKNLRVCNDCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KFISKI  REIILRDVRRFH FKNGTCSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score = 1210 bits (3131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/810 (71%), Positives = 673/810 (83%), Gaps = 12/810 (1%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           I+PDN+AFPA+LKAVA +QD+ LGKQIHAHV K+GYG+ SVTVANTLVN+Y KCG D   
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGA 64

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           VYKVFDRI+E++QVSWNS+I++LC F KW++ALEAFR ML  NVEPSSFTLVSV  ACSN
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           L   +GL +G+QVH   LR GE N+FI+N L+AMY KLG++  +K L  SF  RDLV+WN
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++SSL QN++ LEA+ +LR+M L G++PD  +I+SVLPACSHLEML TGKE+HAYAL+N
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L +NSFVGSALVDMYCNC++V  GRRVFD + D+KI LWNAMI GY QNE+D+EAL+L
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 304

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           FI MEE AGL  N+TTM+ VVPACVRS AF  KE IHG  +K GL RDR+VQN LMDMYS
Sbjct: 305 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 364

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R+G+I+I+  IF  ME RD V+WNTMITGY     H DAL+LL +MQN+E + ++     
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG---- 420

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
              + +  KPNSITLMT+LP C ALSALAKGKEIHAYAI+N LATDV VGSALVDMYAKC
Sbjct: 421 --ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 478

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           GCL  +R+VFD +P +NVITWNVIIMAYGMHG GQE ++LL+ M+ +G     VKPNEVT
Sbjct: 479 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-----VKPNEVT 533

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           FI++FAACSHSGMV EG+ +FY MK DYG+EPS DHYACVVDLLGRAG++++AYQL+NMM
Sbjct: 534 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 593

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P +F+KAGAWSSLLGA RIH N+EIGEIAAQNL  LEP+VASHYVLL+NIYSSA LWDKA
Sbjct: 594 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 653

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
            +VR+ MKE GVRKEPGCSWIE GDE+HKF+AGD SH QSE+L G+LE L ERMRKEGYV
Sbjct: 654 TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYV 713

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           PDTSCVLHNV E+EKE LLCGHSEKLAIAFGILNT PGT IRVAKNLRVCNDCH ATKFI
Sbjct: 714 PDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFI 773

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SKI  REIILRDVRRFH FKNGTCSCGDYW
Sbjct: 774 SKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/629 (27%), Positives = 319/629 (50%), Gaps = 56/629 (8%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI---QDLSLG 96
           R + SW   + S     ++  A+ ++  M   +++P +F   +V+ A + +   + L +G
Sbjct: 75  RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 134

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HA+ ++ G  L+S  + NTLV MYGK G  +     +      +D V+WN+++++LC
Sbjct: 135 KQVHAYGLRKGE-LNSFII-NTLVAMYGKLGK-LASSKVLLGSFGGRDLVTWNTVLSSLC 191

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--E 214
           +  +   ALE  R M+   VEP  FT+ SV  ACS+L   + LR G+++H  +L+ G  +
Sbjct: 192 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL---EMLRTGKELHAYALKNGSLD 248

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQ 273
            N+F+ +AL+ MY    +V   + +F    DR +  WN +++  SQN+   EA ++F+  
Sbjct: 249 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 308

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
               G+  +  ++A V+PAC         + IH + ++  +  D  FV + L+DMY    
Sbjct: 309 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-FVQNTLMDMYSRLG 367

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV----------AGLW 383
           +++   R+F  + D+ +  WN MITGY  +E+ E+AL+L  KM+ +            L 
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           PN+ T+ +++P+C    A    + IH +AIK  L  D  V +AL+DMY++ G +++S+ +
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           FD +  ++ ++WN +I  Y + G   +A+ LLR M                  V   KPN
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM-----------------VQGVKPN 530

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRV 561
            +T ++V   C     + +G  I  Y ++     +      + +VD+  + G +  A ++
Sbjct: 531 EVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 589

Query: 562 FDLMP--VRNVITWNVIIMAYGMHGEGQEVLEL-LKNMVAEGSRGGEVKPNEVTFIALFA 618
            ++MP        W+ ++ A  +H    E+ E+  +N++       +++PN  +   L A
Sbjct: 590 MNMMPRDFNKAGAWSSLLGASRIH-NNLEIGEIAAQNLI-------QLEPNVASHYVLLA 641

Query: 619 AC-SHSGMVSEGMDLFYKMKDDYGIEPSP 646
              S +G+  +  ++   MK+  G+   P
Sbjct: 642 NIYSSAGLWDKATEVRRNMKEQ-GVRKEP 669



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 200/406 (49%), Gaps = 34/406 (8%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M + GIKPD  +  ++L A + L+ ++ GK+IHA+  +    +D+  V + LV++Y  C 
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           +     +VFD IS++    WN++I+     E  E AL  F  M +   + P++ T+ SVV
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVV 119

Query: 394 PACVRSEAFPDKEG------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            AC      P  EG      +H + ++ G   + ++ N L+ MY ++G++  SK +    
Sbjct: 120 TAC---SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSF 175

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD V+WNT+++      Q  +AL  LREM              + E V   +P+  T+
Sbjct: 176 GGRDLVTWNTVLSSLCQNEQLLEALEYLREM--------------VLEGV---EPDEFTI 218

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
            +VLP C  L  L  GKE+HAYA++N  L  +  VGSALVDMY  C  +   RRVFD M 
Sbjct: 219 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 278

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R +  WN +I  Y  +   +E L L   M  E S G  +  N  T   +  AC  SG  
Sbjct: 279 DRKIGLWNAMIAGYSQNEHDKEALLLFIGM--EESAG--LLANSTTMAGVVPACVRSGAF 334

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           S   +  +      G++        ++D+  R GK++ A ++   M
Sbjct: 335 SRK-EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score = 1196 bits (3093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/885 (65%), Positives = 703/885 (79%), Gaps = 7/885 (0%)

Query: 1    MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFRE 60
            +A+    LT  P P  SSLQTH    T  T  P    + R    WI+ LRS+  S+ FR+
Sbjct: 255  LAAKEWLLTQPPLPYPSSLQTHPLTLTLPTPPPT-TVERRSPSQWIDLLRSQTHSSSFRD 313

Query: 61   AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL-SSVTVANTL 119
            AI +Y  M  +   PDNFAFPAVLKA A + DL LGKQIHAHV K+G+   SSV VAN+L
Sbjct: 314  AISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSL 373

Query: 120  VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            VNMYGKCG D+    +VFD I ++D VSWNSMIATLCRF +W+L+L  FR+ML  NV+P+
Sbjct: 374  VNMYGKCG-DLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPT 432

Query: 180  SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
            SFTLVSVA ACS++  R G+RLG+QVH  +LR G+  T+  NAL+ MYA+LGRV+DAK L
Sbjct: 433  SFTLVSVAHACSHV--RGGVRLGKQVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKAL 490

Query: 240  FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            F  F+ +DLVSWNT++SSLSQND+F EA+M++  M + G++PDGV++ASVLPACS LE L
Sbjct: 491  FGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERL 550

Query: 300  DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              G+EIH YALRN  LI+NSFVG+ALVDMYCNC++ + GR VFD +  + +A+WNA++ G
Sbjct: 551  RIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAG 610

Query: 360  YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
            Y +NE+D++AL LF++M   +   PNATT +SV+PACVR + F DKEGIHG+ +K G G+
Sbjct: 611  YARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK 670

Query: 420  DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
            D+YVQNALMDMYSRMGR+EISKTIF  M  RD VSWNTMITG  +CG++ DAL LL EMQ
Sbjct: 671  DKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQ 730

Query: 480  NMEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
              + E   +   D ++    P KPNS+TLMTVLPGC AL+AL KGKEIHAYA++  LA D
Sbjct: 731  RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMD 790

Query: 539  VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
            V VGSALVDMYAKCGCLN A RVFD MP+RNVITWNV+IMAYGMHG+G+E LEL + M A
Sbjct: 791  VAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTA 850

Query: 599  EGSRGGEV-KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G    EV +PNEVT+IA+FAACSHSGMV EG+ LF+ MK  +G+EP  DHYAC+VDLLG
Sbjct: 851  GGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLG 910

Query: 658  RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
            R+G+V++AY+LIN MP   +K  AWSSLLGACRIHQ+VE GEIAA++LF+LEP+VASHYV
Sbjct: 911  RSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYV 970

Query: 718  LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
            L+SNIYSSA LWD+A+ VRKKMKEMGVRKEPGCSWIE GDE+HKFL+GD SH QS++LH 
Sbjct: 971  LMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHE 1030

Query: 778  FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            +LE LS+RMRKEGYVPD SCVLHNV++EEKET+LCGHSE+LAIAFG+LNTPPGTTIRVAK
Sbjct: 1031 YLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAK 1090

Query: 838  NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            NLRVCNDCH ATK ISKI  REIILRDVRRFHHF NGTCSCGDYW
Sbjct: 1091 NLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/894 (62%), Positives = 685/894 (76%), Gaps = 32/894 (3%)

Query: 1   MASSAQCLTLLPSPPLSSLQT---HQPPATTATSLPLP-------GSQTRCKESWIESLR 50
           M+S  Q L LLP P  SS+ T   H  P T+++++           ++ R    W+  LR
Sbjct: 1   MSSFTQPL-LLPYP--SSIHTPNKHHSPPTSSSAITTTTTTTTTVAAEPRLPSEWVSHLR 57

Query: 51  SEARSNQ-FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           S+ +S+  F +AI +Y  M  + + PDNFAFPAVLKA AGIQDL+LGKQ+HAHV K+G  
Sbjct: 58  SQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQA 117

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           L +  V N+LVNMYGKCG D+    +VFD IT +D VSWNSMI   CRF +W+LA+  FR
Sbjct: 118 LPT-AVPNSLVNMYGKCG-DIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFR 175

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
           +ML  NV P+SFTLVSVA ACSNL   +GL LG+QVH   LR G+W TF  NAL+ MYAK
Sbjct: 176 LMLLENVGPTSFTLVSVAHACSNLI--NGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAK 233

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
           LGRV +AKTLF  F+D+DLVSWNTI+SSLSQND+F EA+++L  M   G++P+GV++ASV
Sbjct: 234 LGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASV 293

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           LPACSHLEML  GKEIHA+ L N+ LI+NSFVG ALVDMYCNC++ E GR VFD +  + 
Sbjct: 294 LPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRT 353

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           IA+WNAMI GY +NE+D EA+ LF++M    GL PN+ T+SSV+PACVR E+F DKEGIH
Sbjct: 354 IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIH 413

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
              +K G  +D+YVQNALMDMYSRMGRIEI+++IF  M  +D VSWNTMITGY +CG+H 
Sbjct: 414 SCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHD 473

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHA 528
           DAL LL +MQ  + E   N   D ++    P KPNS+TLMTVLPGC AL+AL KGKEIHA
Sbjct: 474 DALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHA 533

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           YA++ ML+ DV VGSALVDMYAKCGCLN +R VF+ M VRNVITWNV+IMAYGMHG+G+E
Sbjct: 534 YAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEE 593

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            L+L + MV EG    E++PNEVT+IA+FA+ SHSGMV EG++LFY MK  +GIEP+ DH
Sbjct: 594 ALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDH 653

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YAC+VDLLGR+G++E+AY LI  MP    K  AWSSLLGAC+IHQN+EIGEIAA+NLF+L
Sbjct: 654 YACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVL 713

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           +P+V          Y + Q       + +KMKE GVRKEPGCSWIE GDE+HKFLAGD S
Sbjct: 714 DPNVLD--------YGTKQSM-----LGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVS 760

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H QS+++H +LE LS RM+KEGYVPDTSCVLHNV EEEKET+LCGHSE+LAIAFG+LNT 
Sbjct: 761 HPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTS 820

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PGTTIRVAKNLRVCNDCH ATKFISKI  REIILRDVRRFHHF+NGTCSCGDYW
Sbjct: 821 PGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/673 (67%), Positives = 539/673 (80%), Gaps = 9/673 (1%)

Query: 10  LLPSPPL--SSLQTHQPPATT--ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSY 65
           L P  P+  SS QTH+ P     + S P P SQ+R + SWIESLR   RSN FREAI +Y
Sbjct: 6   LQPFSPILSSSAQTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTY 65

Query: 66  IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK 125
           ++M  S + PD++AFP VLKAV G+QDL+LGKQIHAHVVKYGY  SSV +AN+LVN YGK
Sbjct: 66  VDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGK 125

Query: 126 CGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
           C S++ DVYKVFDRI E+D VSWNS+I+  CR  +W+LALEAFR ML  ++EPSSFTLVS
Sbjct: 126 C-SELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVS 184

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             +ACSNL + +GLRLG+Q+HG   R G W+TF  NALM MYA LGR+DDAK LFK FED
Sbjct: 185 PVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFED 244

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+L+SWNT++SS SQN++F+EA+M LR M L G+KPDGV++ASVLPACS+LEML TGKEI
Sbjct: 245 RNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEI 304

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           HAYALR+  LI+NSFVGSALVDMYCNC +V  GRRVFD I ++K  LWNAMI GY QNE+
Sbjct: 305 HAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEH 364

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           DE+ALMLFI+M  VAGL PN TTM+S+VPA  R E+F  KE IHG+ IK  L RDRYVQN
Sbjct: 365 DEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQN 424

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           ALMDMYSRM ++EISKTIFD MEVRD VSWNTMITGY I G + DAL++L EMQ+  E  
Sbjct: 425 ALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGI 484

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           N+   +D D+     KPNSITLMTVLPGC +L+ALAKGKEIHAYA+RN LA++V VGSAL
Sbjct: 485 NK---HDGDKQACF-KPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSAL 540

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           VDMYAKCGCLN +RRVFD MP++NVITWNVI+MAYGMHG G+E LEL K+MVA+G   GE
Sbjct: 541 VDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGE 600

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           VKP EVT IA+ AACSHSGMV EG+ LF++MKDD+GIEP PDHYACV DLLGRAGKVE A
Sbjct: 601 VKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQA 660

Query: 666 YQLINMMPPEFDK 678
           Y  IN MP +FDK
Sbjct: 661 YDFINTMPSDFDK 673


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/824 (52%), Positives = 573/824 (69%), Gaps = 29/824 (3%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVK----YGYGLSSVTVANTLVNMYGKCGSDMW 131
           D+FA P   K+ A ++ L   + IH   ++    +G+   +  VAN L+  Y +CG D+ 
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGF---TPAVANALLTAYARCG-DLT 113

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
               +F+ +  +D V++NS+IA LC F +W  AL+A R ML      SSFTLVSV LACS
Sbjct: 114 AALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACS 173

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAMYAKLGRVDDAKTLFKSFEDRD- 247
           +L+  + LRLGR+ H  +L+ G  +    F  NAL++MYA+LG VDDA+ LF S +  D 
Sbjct: 174 HLA--EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDS 231

Query: 248 ----LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
               +V+WNT+VS L Q+ +  EA+  +  M  RG++PDG++ AS LPACS LEML  G+
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYG 361
           E+HAY L++  L  NSFV SALVDMY +   V   RRVFD +    +++ LWNAM+ GY 
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           Q   DEEAL LF +ME  AG+ P+ TT++ V+PAC RSE F  KE +HG+ +K G+  + 
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN- 480
           +VQNALMD+Y+R+G +E ++ IF  +E RD VSWNT+ITG  + G   DA  L+REMQ  
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 481 --MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
               +    + +   DE  +   PN++TLMT+LPGC  L+A AKGKEIH YA+R+ L +D
Sbjct: 472 GRFTDATTEDGIAGTDEEPV--VPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSD 529

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + VGSALVDMYAKCGCL  +R VFD +P RNVITWNV+IMAYGMHG G E + L   MV 
Sbjct: 530 IAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVM 589

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
                 E KPNEVTFIA  AACSHSGMV  GM+LF+ MK ++G++P+PD +AC VD+LGR
Sbjct: 590 SN----EAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGR 645

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG++++AY +I  M P   +  AWSS LGACR+H+NV +GEIAA+ LF LEPD ASHYVL
Sbjct: 646 AGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVL 705

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           L NIYS+A LW+K+ +VR +M++ GV KEPGCSWIE    IH+F+AG+ +H +S  +H  
Sbjct: 706 LCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAH 765

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           ++ L ERMR +GY PDTS VLH++ E EK  +L  HSEKLAIAFG+L TPPG TIRVAKN
Sbjct: 766 MDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKN 825

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVCNDCH+A KFIS++  REI+LRDVRRFHHF +G CSCGDYW
Sbjct: 826 LRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/821 (53%), Positives = 579/821 (70%), Gaps = 20/821 (2%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVNMYGKCGSDMWDVY 134
           D+FA P  +K+ A ++D    + IH   ++       +  V+N L+  Y +CG     + 
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 135 KVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                  + +D VS+NS+I+ LC F +W  AL+A R ML ++ E SSFTLVSV LACS+L
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHL 165

Query: 194 SRRDGLRLGRQVHGNSLRVGEWNT----FIMNALMAMYAKLGRVDDAKTLFKSFEDR--D 247
           + + G RLGR+ H  +L+ G  +     F  NAL++MYA+LG VDDA+ LF S      D
Sbjct: 166 ADQ-GHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGD 224

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           LV+WNT++S L Q  +  EAV  L  M   G++PDGV+ AS LPACS LE+L  G+E+HA
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALWNAMITGYGQNE- 364
           + L++D L  NSFV SALVDMY +  +V   RRVFD + +  +++ +WNAMI GY Q+  
Sbjct: 285 FVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGG 344

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            DEEA+ LF +ME  AG  P+ TTM+ V+PAC RSE F  KE +HG+ +K  +  +R+VQ
Sbjct: 345 MDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQ 404

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NALMDMY+R+GR++ + TIF  +++RD VSWNT+ITG  + G   +A  L+REMQ     
Sbjct: 405 NALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSA 464

Query: 485 KNRNNVYDLDETVL---RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
            +   + + D+T +   R  PN+ITLMT+LPGC  L+A A+GKEIH YA+R+ L +D+ V
Sbjct: 465 ASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAV 524

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           GSALVDMYAKCGCL  AR VFD +P RNVITWNV+IMAYGMHG G E L L   MVA G 
Sbjct: 525 GSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANG- 583

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
              E  PNEVTFIA  AACSHSG+V  G++LF  MK DYG EP+P  +ACVVD+LGRAG+
Sbjct: 584 ---EATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGR 640

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +++AY +I+ M P   +  AWS++LGACR+H+NV++G IAA+ LF LEPD ASHYVLL N
Sbjct: 641 LDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCN 700

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IYS+A LW+ + +VR  M++ GV KEPGCSWIE    IH+F+AG+ +H +S Q+H  ++ 
Sbjct: 701 IYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDA 760

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L ERMR+EGYVPDTSCVLH+V+E EK  +L  HSEKLAIAFG+L  PPG TIRVAKNLRV
Sbjct: 761 LWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRV 820

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CNDCH+A KFIS++  REI+LRDVRRFHHF++GTCSCGDYW
Sbjct: 821 CNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 210/430 (48%), Gaps = 37/430 (8%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+    +M    ++PD   F + L A + ++ L +G+++HA V+K     ++  VA+ L
Sbjct: 243 EAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASAL 302

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQV--SWNSMIATLCRFGKWD-LALEAF-RMMLYSN 175
           V+MY      +    +VFD + E  +    WN+MI    + G  D  A+E F RM   + 
Sbjct: 303 VDMYAS-NEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAG 361

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQ-VHGNSL-RVGEWNTFIMNALMAMYAKLGRV 233
             PS  T+  V  AC+    R  +  G++ VHG  + R    N F+ NALM MYA+LGR+
Sbjct: 362 CAPSETTMAGVLPACA----RSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRM 417

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL----------------- 276
           D+A T+F   + RD+VSWNT+++         EA   +R+M L                 
Sbjct: 418 DEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTS 477

Query: 277 ---RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
              +   P+ +++ ++LP C+ L     GKEIH YA+R+ +  D + VGSALVDMY  C 
Sbjct: 478 VDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLA-VGSALVDMYAKCG 536

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   R VFD +  + +  WN +I  YG +   +EAL LF +M       PN  T  + +
Sbjct: 537 CLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAAL 596

Query: 394 PACVRSEAFPDK--EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-- 449
            AC  S    D+  E   G     G     Y+   ++D+  R GR++ +  I   M    
Sbjct: 597 AACSHS-GLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGE 655

Query: 450 RDTVSWNTMI 459
               +W+TM+
Sbjct: 656 HQVSAWSTML 665


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/824 (53%), Positives = 576/824 (69%), Gaps = 20/824 (2%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVNMYGKCGSDMWD 132
           Q D+FA P  +K+ A ++D    + +HA  ++       S  V N L+  Y +CG     
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 133 VYKVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV-EPSSFTLVSVALAC 190
           +       TE +D VS+NS+I+ LC F +W+ AL+A R ML     + SSFTLVSV LAC
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLAC 179

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEWNT----FIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           S+L   DG RLGR+ H  +L+ G  +     F  NAL++MYA+LG VDDA++LF++    
Sbjct: 180 SHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAA 239

Query: 247 ------DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
                 D+V+WNT++S L Q  +  EAV  L  M   G++PDGV+ AS LPACS LEML 
Sbjct: 240 FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLA 299

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALWNAMIT 358
            G+E+HA  L++  L  NSFV SALVDMY    +V   RRVFD + +  +++ +WNAMI 
Sbjct: 300 LGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMIC 359

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY Q   DEEAL LF +ME  AG  P+ TTMS V+PAC RSE F  KE +HG+ +K G+ 
Sbjct: 360 GYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMA 419

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            +R+VQNALMDMY+R+G +++++ IF  ++ RD VSWNT+ITG  + G   +A  L+ EM
Sbjct: 420 GNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEM 479

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q      + ++  +  E   R  PN+ITLMT+LPGC AL+A A+GKEIH YA+R+ L +D
Sbjct: 480 QLPSPSPSSSSTTEEGEA-HRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESD 538

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + VGSALVDMYAKCGCL  +R VFD +P RNVITWNV+IMAYGMHG G E + L   M A
Sbjct: 539 IAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAA 598

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
               GGE  PNEVTFIA  AACSHSG+V  G++LF+ M+ D+G++P+PD +ACVVD+LGR
Sbjct: 599 ----GGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGR 654

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG++++AY +I  M P   +  AWSSLLGACR+H+NVE+GE+AA+ LF LEP  ASHYVL
Sbjct: 655 AGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVL 714

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           L NIYS+A +WDK++ VR +M+  GV KEPGCSWIE    IH+F+AG+ SH  S ++H  
Sbjct: 715 LCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAH 774

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           ++ L ERMR+EGY PDTSCVLH+V+E+EK  +L  HSEKLAIAFG+L  PPG  IRVAKN
Sbjct: 775 MDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKN 834

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVCNDCH+A KF+SK+  R+I+LRDVRRFHHF++G+CSCGDYW
Sbjct: 835 LRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/831 (52%), Positives = 562/831 (67%), Gaps = 30/831 (3%)

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVN 121
           LS I M     Q D+ A P  +K+ A ++D    + IHA  ++ G     S  VAN L+ 
Sbjct: 43  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLT 102

Query: 122 MYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            Y +CG  +    +VF  I++   D VS+NS+I+ LC F +WD AL A R ML      +
Sbjct: 103 AYARCGR-LAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLT 161

Query: 180 SFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAMYAKLGRVDD 235
           SFTLVSV  A S+L +    +RLGR+ H  +L+ G  +    F  NAL++MYA+LG V D
Sbjct: 162 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 221

Query: 236 AKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           A+ LF        D+V+WNT+VS L Q+  F EAV  L  M   G++PDGV+ AS LPAC
Sbjct: 222 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 281

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIA 351
           S LE+LD G+E+HAY +++D L  NSFV SALVDMY    +V   R+VFD + D  K++ 
Sbjct: 282 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 341

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           +WNAMI GY Q   DEEAL LF +ME  AG  P  TTM+SV+PAC RSEAF  KE +HG+
Sbjct: 342 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 401

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            +K G+  +R+VQNALMDMY+R+G+ ++++ IF  +++ D VSWNT+ITG  + G   DA
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             L REMQ +EE                  PN+ITLMT+LPGC  L+A A+GKEIH YA+
Sbjct: 462 FQLAREMQQLEEGG--------------VVPNAITLMTLLPGCAILAAPARGKEIHGYAV 507

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+ L TDV VGSALVDMYAKCGCL  +R VFD +P RN ITWNV+IMAYGMHG G E   
Sbjct: 508 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATV 567

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           L   M A G    E +PNEVTF+A  AACSHSGMV  G+ LF+ M+ D+G+EP+PD  AC
Sbjct: 568 LFDRMTASG----EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILAC 623

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           VVD+LGRAG++++AY ++  M     +  AWS++LGACR+H+NV +GEIA + L  LEP+
Sbjct: 624 VVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE 683

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
            ASHYVLL NIYS+A  W +A +VR +M+  GV KEPGCSWIE    IH+F+AG+ +H  
Sbjct: 684 EASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPA 743

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           SE++H  +E L   M   GY PDTSCVLH++++ +K  +L  HSEKLAIAFG+L   PG 
Sbjct: 744 SEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA 803

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TIRVAKNLRVCNDCH+A KF+SK+  REI+LRDVRRFHHF+NG CSCGDYW
Sbjct: 804 TIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/831 (52%), Positives = 562/831 (67%), Gaps = 30/831 (3%)

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVN 121
           LS I M     Q D+ A P  +K+ A ++D    + IHA  ++ G     S  VAN L+ 
Sbjct: 45  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLT 104

Query: 122 MYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            Y +CG  +    +VF  I++   D VS+NS+I+ LC F +WD AL A R ML      +
Sbjct: 105 AYARCGR-LAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLT 163

Query: 180 SFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAMYAKLGRVDD 235
           SFTLVSV  A S+L +    +RLGR+ H  +L+ G  +    F  NAL++MYA+LG V D
Sbjct: 164 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 223

Query: 236 AKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           A+ LF        D+V+WNT+VS L Q+  F EAV  L  M   G++PDGV+ AS LPAC
Sbjct: 224 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 283

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIA 351
           S LE+LD G+E+HAY +++D L  NSFV SALVDMY    +V   R+VFD + D  K++ 
Sbjct: 284 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 343

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           +WNAMI GY Q   DEEAL LF +ME  AG  P  TTM+SV+PAC RSEAF  KE +HG+
Sbjct: 344 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 403

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            +K G+  +R+VQNALMDMY+R+G+ ++++ IF  +++ D VSWNT+ITG  + G   DA
Sbjct: 404 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 463

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             L REMQ +EE                  PN+ITLMT+LPGC  L+A A+GKEIH YA+
Sbjct: 464 FQLAREMQQLEEGG--------------VVPNAITLMTLLPGCAILAAPARGKEIHGYAV 509

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+ L TDV VGSALVDMYAKCGCL  +R VFD +P RN ITWNV+IMAYGMHG G E   
Sbjct: 510 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATV 569

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           L   M A G    E +PNEVTF+A  AACSHSGMV  G+ LF+ M+ D+G+EP+PD  AC
Sbjct: 570 LFDRMTASG----EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILAC 625

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           VVD+LGRAG++++AY ++  M     +  AWS++LGACR+H+NV +GEIA + L  LEP+
Sbjct: 626 VVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE 685

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
            ASHYVLL NIYS+A  W +A +VR +M+  GV KEPGCSWIE    IH+F+AG+ +H  
Sbjct: 686 EASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPA 745

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           SE++H  +E L   M   GY PDTSCVLH++++ +K  +L  HSEKLAIAFG+L   PG 
Sbjct: 746 SEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA 805

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TIRVAKNLRVCNDCH+A KF+SK+  REI+LRDVRRFHHF+NG CSCGDYW
Sbjct: 806 TIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/831 (52%), Positives = 562/831 (67%), Gaps = 30/831 (3%)

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVN 121
           LS I M     Q D+ A P  +K+ A ++D    + IHA  ++ G     S  VAN L+ 
Sbjct: 43  LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLT 102

Query: 122 MYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            Y +CG  +    +VF  I++   D VS+NS+I+ LC F +WD AL A R ML      +
Sbjct: 103 AYARCGR-LAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLT 161

Query: 180 SFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAMYAKLGRVDD 235
           SFTLVSV  A S+L +    +RLGR+ H  +L+ G  +    F  NAL++MYA+LG V D
Sbjct: 162 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 221

Query: 236 AKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           A+ LF        D+V+WNT+VS L Q+  F EAV  L  M   G++PDGV+ AS LPAC
Sbjct: 222 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 281

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIA 351
           S LE+LD G+E+HAY +++D L  NSFV SALVDMY    +V   R+VFD + D  K++ 
Sbjct: 282 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 341

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           +WNAMI GY Q   DEEAL LF +ME  AG  P  TTM+SV+PAC RSEAF  KE +HG+
Sbjct: 342 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 401

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            +K G+  +R+VQNALMDMY+R+G+ ++++ IF  +++ D VSWNT+ITG  + G   DA
Sbjct: 402 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             L REMQ +EE                  PN+ITLMT+LPGC  L+A A+GKEIH YA+
Sbjct: 462 FQLAREMQQLEEGG--------------VVPNAITLMTLLPGCAILAAPARGKEIHGYAV 507

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+ L TDV VGSALVDMYAKCGCL  +R VFD +P RN ITWNV+IMAYGMHG G E   
Sbjct: 508 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATV 567

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           L   M A G    E +PNEVTF+A  AACSHSGMV  G+ LF+ M+ D+G+EP+PD  AC
Sbjct: 568 LFDRMTASG----EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILAC 623

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           VVD+LGRAG++++AY ++  M     +  AWS++LGACR+H+NV +GEIA + L  LEP+
Sbjct: 624 VVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE 683

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
            ASHYVLL NIYS+A  W +A +VR +M+  GV KEPGCSWIE    IH+F+AG+ +H  
Sbjct: 684 EASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPA 743

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           SE++H  +E L   M   GY PDTSCVLH++++ +K  +L  HSEKLAIAFG+L   PG 
Sbjct: 744 SEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA 803

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TIRVAKNLRVCNDCH+A KF+SK+  REI+LRDVRRFHHF+NG CSCGDYW
Sbjct: 804 TIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/720 (54%), Positives = 503/720 (69%), Gaps = 26/720 (3%)

Query: 171 MLYSNVEPSSFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAM 226
           ML      +SFTLVSV  A S+L +    +RLGR+ H  +L+ G  +    F  NAL++M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 227 YAKLGRVDDAKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
           YA+LG V DA+ LF        D+V+WNT+VS L Q+  F EAV  L  M   G++PDGV
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           + AS LPACS LE+LD G+E+HAY +++D L  NSFV SALVDMY    +V   R+VFD 
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180

Query: 345 ISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + D  K++ +WNAMI GY Q   DEEAL LF +ME  AG  P  TTM+SV+PAC RSEAF
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 240

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
             KE +HG+ +K G+  +R+VQNALMDMY+R+G+ ++++ IF  +++ D VSWNT+ITG 
Sbjct: 241 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGC 300

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            + G   DA  L REMQ +EE                  PN+ITLMT+LPGC  L+A A+
Sbjct: 301 VVQGHVADAFQLAREMQQLEEGG--------------VVPNAITLMTLLPGCAILAAPAR 346

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKEIH YA+R+ L TDV VGSALVDMYAKCGCL  +R VFD +P RN ITWNV+IMAYGM
Sbjct: 347 GKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 406

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E   L   M A G    E +PNEVTF+A  AACSHSGMV  G+ LF+ M+ D+G+
Sbjct: 407 HGLGGEATVLFDRMTASG----EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 462

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           EP+PD  ACVVD+LGRAG++++AY ++  M     +  AWS++LGACR+H+NV +GEIA 
Sbjct: 463 EPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAG 522

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + L  LEP+ ASHYVLL NIYS+A  W +A +VR +M+  GV KEPGCSWIE    IH+F
Sbjct: 523 ERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRF 582

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           +AG+ +H  SE++H  +E L   M   GY PDTSCVLH++++ +K  +L  HSEKLAIAF
Sbjct: 583 MAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAF 642

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+L   PG TIRVAKNLRVCNDCH+A KF+SK+  REI+LRDVRRFHHF+NG CSCGDYW
Sbjct: 643 GLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 257/524 (49%), Gaps = 38/524 (7%)

Query: 77  NFAFPAVLKAV----AGIQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMW 131
           +F   +VL+AV    A    + LG++ HA  +K G        A N L++MY + G  + 
Sbjct: 10  SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL-VA 68

Query: 132 DVYKVFDRIT--EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           D  ++F   T    D V+WN+M++ L + G +D A++    M+   V P   T  S   A
Sbjct: 69  DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 128

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFED-- 245
           CS L   D   +GR++H   ++  E   N+F+ +AL+ MYA   +V  A+ +F    D  
Sbjct: 129 CSRLELLD---VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSG 185

Query: 246 RDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           + L  WN ++   +Q     EA+ +F R  A  G  P   ++ASVLPAC+  E     + 
Sbjct: 186 KQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEA 245

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +H Y ++   +  N FV +AL+DMY    + +  RR+F  +    +  WN +ITG     
Sbjct: 246 VHGYVVKRG-MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304

Query: 365 YDEEALMLFIKMEEV--AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           +  +A  L  +M+++   G+ PNA T+ +++P C    A    + IHG+A++  L  D  
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA 364

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+DMY++ G + +S+ +FD +  R+T++WN +I  Y + G  G+A +L   M    
Sbjct: 365 VGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASG 424

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVV 541
           E                 +PN +T M  L  C     + +G ++ HA    + +     +
Sbjct: 425 E----------------ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDI 468

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMH 583
            + +VD+  + G L+ A  +   M    + V  W+ ++ A  +H
Sbjct: 469 LACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 512



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 214/431 (49%), Gaps = 25/431 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +S  F EA+ +  +M    ++PD   F + L A + ++ L +G+++HA+V
Sbjct: 86  TWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYV 145

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE--KDQVSWNSMIATLCRFGKW 161
           +K     ++  VA+ LV+MY      +    +VFD + +  K    WN+MI    + G  
Sbjct: 146 IKDDELAANSFVASALVDMYAT-HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 204

Query: 162 DLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           + AL  F RM   +   P   T+ SV  AC   +R +       VHG  ++ G   N F+
Sbjct: 205 EEALRLFARMEAEAGFVPCETTMASVLPAC---ARSEAFAGKEAVHGYVVKRGMAGNRFV 261

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL--- 276
            NALM MYA+LG+ D A+ +F   +  D+VSWNT+++         +A    R+M     
Sbjct: 262 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 321

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+ P+ +++ ++LP C+ L     GKEIH YA+R+ +  D + VGSALVDMY  C  + 
Sbjct: 322 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA-VGSALVDMYAKCGCLA 380

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R VFD +  +    WN +I  YG +    EA +LF +M       PN  T  + + AC
Sbjct: 381 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 440

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEV- 449
             S    D+     HA++    RD  V+        ++D+  R GR++ +  +   ME  
Sbjct: 441 SHS-GMVDRGLQLFHAME----RDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAG 495

Query: 450 -RDTVSWNTMI 459
            +   +W+TM+
Sbjct: 496 EQQVSAWSTML 506


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/659 (57%), Positives = 478/659 (72%), Gaps = 39/659 (5%)

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R   SW   + S ++++ F EA+    +M + G +PD  +  +VL A S L+ L TG++I
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 306 HAYALR----------NDILI----------DNSFVGSALVDMYCNCREVECGRRVFDFI 345
           HA A++           + L+          D +F  +AL+ MY     V+  + +F+  
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            D+ +  WN MI+ + Q++   EAL  F ++  + G+  +  T++SV+PAC   E     
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFF-RLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 406 EGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           + IH + ++   L  + +V +AL+DMY    ++E  + +FD +  R    WN MI+GY  
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC-GALSALAKG 523
            G    AL+L  EM                  V    PN+ T+ +V+P C  +L+A+AKG
Sbjct: 294 NGLDEKALILFIEMIK----------------VAGLLPNTTTMASVMPACVHSLAAIAKG 337

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           KEIHAYAIRNMLA+D+ VGSALVDMYAKCGCLN +RRVF+ MP +NVITWNV+IMA GMH
Sbjct: 338 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 397

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G+G+E LEL KNMVAE  RGGE KPNEVTFI +FAACSHSG++SEG++LFY+MK D+G+E
Sbjct: 398 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 457

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P+ DHYACVVDLLGRAG++E+AY+L+N MP EFDK GAWSSLLGACRIHQNVE+GE+AA+
Sbjct: 458 PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAK 517

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
           NL  LEP+VASHYVLLSNIYSSA LW+KAM+VRK M++MGV+KEPGCSWIEF DE+HKF+
Sbjct: 518 NLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFM 577

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           AGD SH QSEQLHGFLE LSE+MRKEGYVPDTSCVLHNV+E+EKE LLCGHSEKLAIAFG
Sbjct: 578 AGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFG 637

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ILNTPPGTTIRVAKNLRVCNDCH ATKFISKI  REII+RDVRRFHHFK GTCSCGDYW
Sbjct: 638 ILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/533 (39%), Positives = 306/533 (57%), Gaps = 54/533 (10%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +   SW   + +  R   +  A+  +  M  S   P +F   +V  A S L     L+ G
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGL---QDLKTG 111

Query: 203 RQVHGNSLRVGEWN----------------------TFIMNALMAMYAKLGRVDDAKTLF 240
            Q+H  +++ G  +                      TF  NALMAMYAKLGRVDD+K LF
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +SF DRD+VSWNT++SS SQ+D+F EA+ F R M L G++ DGV+IASVLPACSHLE LD
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            GKEIHAY LRN+ LI+NSFVGSALVDMYCNCR+VE GRRVFD I  ++I LWNAMI+GY
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-EAFPDKEGIHGHAIKLGLGR 419
            +N  DE+AL+LFI+M +VAGL PN TTM+SV+PACV S  A    + IH +AI+  L  
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D  V +AL+DMY++ G + +S+ +F++M  ++ ++WN +I     CG HG     L   +
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA---CGMHGKGEEALELFK 408

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
           NM  E  R             KPN +T +TV   C     +++G  +  Y +++    + 
Sbjct: 409 NMVAEAGRGG---------EAKPNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEP 458

Query: 540 VVG--SALVDMYAKCGCLNFARRVFDLMPVR--NVITWNVIIMAYGMHGEGQEVLEL-LK 594
                + +VD+  + G L  A  + + MP     V  W+ ++ A  +H +  E+ E+  K
Sbjct: 459 TSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH-QNVELGEVAAK 517

Query: 595 NMVAEGSRGGEVKPNEVT-FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           N++        ++PN  + ++ L    S +G+ ++ M++   M+   G++  P
Sbjct: 518 NLL-------HLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR-QMGVKKEP 562



 Score =  308 bits (789), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 276/491 (56%), Gaps = 56/491 (11%)

Query: 13  SPPLSSLQTHQPPAT--------TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS 64
           SPP  SLQT  PP+         T+ + P P S +R   SW+++LRS  RSN FREAI +
Sbjct: 22  SPP--SLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIST 79

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           YIEMT S  +PDNFAFPAVLKAV+G+QDL  G+QIHA  VK+GYG SSVTVANTLVNMYG
Sbjct: 80  YIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYG 139

Query: 125 KCGS------------DMW-------DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
           KCG              M+       D   +F+   ++D VSWN+MI++  +  ++  AL
Sbjct: 140 KCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL 199

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNAL 223
             FR+M+   VE    T+ SV  ACS+L R D   +G+++H   LR  +   N+F+ +AL
Sbjct: 200 AFFRLMVLEGVELDGVTIASVLPACSHLERLD---VGKEIHAYVLRNNDLIENSFVGSAL 256

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQMALRGIKPD 282
           + MY    +V+  + +F     R +  WN ++S  ++N    +A ++F+  + + G+ P+
Sbjct: 257 VDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 316

Query: 283 GVSIASVLPACSH-LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             ++ASV+PAC H L  +  GKEIHAYA+RN +L  +  VGSALVDMY  C  +   RRV
Sbjct: 317 TTTMASVMPACVHSLAAIAKGKEIHAYAIRN-MLASDITVGSALVDMYAKCGCLNLSRRV 375

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG----LWPNATTMSSVVPACV 397
           F+ + +K +  WN +I   G +   EEAL LF  M   AG      PN  T  +V  AC 
Sbjct: 376 FNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACS 435

Query: 398 RSEAFPDKEGI-------HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM--E 448
            S      EG+       H H ++     D Y    ++D+  R G++E +  + + M  E
Sbjct: 436 HSGLI--SEGLNLFYRMKHDHGVE--PTSDHYA--CVVDLLGRAGQLEEAYELVNTMPAE 489

Query: 449 VRDTVSWNTMI 459
                +W++++
Sbjct: 490 FDKVGAWSSLL 500


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/737 (50%), Positives = 502/737 (68%), Gaps = 23/737 (3%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY-GLSSVTVANTLVNMYGKCGSDMWDVY 134
           D FA P   K+ A ++ L+  + IH   +++      +  V+N L+  Y +CG D+    
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCG-DLTAAL 114

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            +FD +  +D V++NS+IA LC F +W  AL+A R ML      +SFTLVSV LACS+L+
Sbjct: 115 ALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLA 174

Query: 195 RRDGLRLGRQVHGNSLRVGEWN---TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL--- 248
             + LRLGR+ H  +L+ G  +    F  NAL++MYA+LG VDDA+TLF S    D+   
Sbjct: 175 --EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGG 232

Query: 249 --VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
             V+WNT+VS L Q+ +  EA+  L  M  RG++PDGV+ AS LPACS LEML  G+E+H
Sbjct: 233 GVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMH 292

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNE 364
           AY L++  L  NSFV SALVDMY +   V   R VFD +   ++++ LWNAMI GY Q  
Sbjct: 293 AYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAG 352

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            DE+AL LF +ME  AG+ P+ TT++ V+P+C RSE F  KE +HG+ +K G+  + +VQ
Sbjct: 353 LDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQ 412

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN---M 481
           NALMD+Y+R+G ++ ++ IF  +E RD VSWNT+ITG  + G   DA  L+REMQ     
Sbjct: 413 NALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRF 472

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
            +    + +   DE  +   PN+ITLMT+LPGC  L+A A+GKEIH YA+R+ L +DV V
Sbjct: 473 TDAATEDGIAGADEEPV--VPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAV 530

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           GSALVDMYAKCGCL  +R VFD +P RNVITWNV+IMAYGMHG G E + L   MVA   
Sbjct: 531 GSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASD- 589

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
              E KPNEVTFIA  AACSHSGMV  G+++F  MK ++G+EP+PD +AC VD+LGRAG+
Sbjct: 590 ---EAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGR 646

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +++AY++I+ M P   +  AWSS LGACR+H+NV +GEIAA+ LF LEPD ASHYVLL N
Sbjct: 647 LDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCN 706

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IYS+A LW+K+ +VR +M++ GV KEPGCSWIE    IH+F+AG+ +H +S  +H  ++ 
Sbjct: 707 IYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDA 766

Query: 782 LSERMRKEGYVPDTSCV 798
           L ERMR +GY PDT+ +
Sbjct: 767 LWERMRDQGYTPDTTLI 783


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/791 (42%), Positives = 483/791 (61%), Gaps = 35/791 (4%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKD----QVSWNSMI 152
           I  HV  Y YG S +  +  +  +         +V    ++   T+ D     V W   I
Sbjct: 33  ISYHVCFYFYGPSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETI 92

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
               + G W+ AL  +  M  + + P     +SV  AC + S    L+ GR+VH + +  
Sbjct: 93  IGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQS---DLQAGRKVHEDIIAR 149

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E +  +  AL +MY K G +++A+ +F     RD+VSWN I++  SQN +  EA+   
Sbjct: 150 GFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALF 209

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M + GIKP+  ++ SV+P C+HL  L+ GK+IH YA+R+ I  D   V + LV+MY  
Sbjct: 210 SEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD-VLVVNGLVNMYAK 268

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  V    ++F+ +  + +A WNA+I GY  N    EAL  F +M+ V G+ PN+ TM S
Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ-VRGIKPNSITMVS 327

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+PAC    A    + IHG+AI+ G   +  V NAL++MY++ G +  +  +F+ M  ++
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKN 387

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+WN +I+GY+  G   +AL L  EMQ                     KP+S  +++VL
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQG-----------------IKPDSFAIVSVL 430

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           P C    AL +GK+IH Y IR+   ++VVVG+ LVD+YAKCG +N A+++F+ MP ++V+
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVV 490

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +I+AYG+HG G++ L L   M   G+     K + + F A+  ACSH+G+V +G+ 
Sbjct: 491 SWTTMILAYGIHGHGEDALALFSKMQETGT-----KLDHIAFTAILTACSHAGLVDQGLQ 545

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  MK DYG+ P  +HYAC+VDLLGRAG +++A  +I  M  E D A  W +LLGACRI
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPD-ANVWGALLGACRI 604

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H N+E+GE AA++LF L+PD A +YVLLSNIY+ AQ W+    +RK MKE GV+K+PGCS
Sbjct: 605 HCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCS 664

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            +    ++  FL GD +H QSEQ++  LE L E+MRK GYVP+T+  L +V EE KE +L
Sbjct: 665 VVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENIL 724

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLAI+FGI+NT PG  IR+ KNLRVC+DCH ATKFISKI  REII+RD  RFHH 
Sbjct: 725 SSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHV 784

Query: 872 KNGTCSCGDYW 882
           KNG CSCGDYW
Sbjct: 785 KNGFCSCGDYW 795



 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 213/693 (30%), Positives = 348/693 (50%), Gaps = 57/693 (8%)

Query: 12  PSP-PLSSL--QTHQPPATTATSLPLPGSQTRCKES--------WIESLRSEARSNQFRE 60
           PSP P S++  Q  +    T   +    +QT+  ++        W E++    ++  + +
Sbjct: 44  PSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNK 103

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  Y +M R+ I PD   F +V+KA     DL  G+++H  ++  G+  S V V   L 
Sbjct: 104 ALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFE-SDVIVGTALA 162

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           +MY KCGS + +  +VFDR+ ++D VSWN++IA   + G+   AL  F  M  + ++P+S
Sbjct: 163 SMYTKCGS-LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNS 221

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            TLVSV   C++L     L  G+Q+H  ++R G E +  ++N L+ MYAK G V+ A  L
Sbjct: 222 STLVSVMPVCAHLL---ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKL 278

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+    RD+ SWN I+   S N +  EA+ F  +M +RGIKP+ +++ SVLPAC+HL  L
Sbjct: 279 FERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFAL 338

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G++IH YA+R+     N  VG+ALV+MY  C  V    ++F+ +  K +  WNA+I+G
Sbjct: 339 EQGQQIHGYAIRSG-FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISG 397

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q+ +  EAL LFI+M +  G+ P++  + SV+PAC    A    + IHG+ I+ G   
Sbjct: 398 YSQHGHPHEALALFIEM-QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           +  V   L+D+Y++ G +  ++ +F+ M  +D VSW TMI  Y I G   DAL L  +MQ
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATD 538
                          ET    K + I    +L  C     + +G +       +  LA  
Sbjct: 517 ---------------ET--GTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559

Query: 539 VVVGSALVDMYAKCGCLNFARRVF---DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           +   + LVD+  + G L+ A  +     L P  NV  W  ++ A  +H   +   +  K+
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV--WGALLGACRIHCNIELGEQAAKH 617

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD------HY 649
           +        E+ P+   +  L +         E +    KM  + G++  P       H 
Sbjct: 618 LF-------ELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHR 670

Query: 650 ACVVDLLG--RAGKVEDAYQLINMMPPEFDKAG 680
                L+G     + E  Y ++ ++  +  KAG
Sbjct: 671 DVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAG 703


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/840 (39%), Positives = 521/840 (62%), Gaps = 31/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++     A++++ EM    ++ + F F +VLKA + ++DL +GKQ+H  V
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+    V VANTLV MY KC  +  D  ++FD I E++ VSWN++ +   +      
Sbjct: 184 VVSGFE-GDVFVANTLVVMYAKC-DEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M+ S ++P+ F+L S+  AC+ L  RD  R G+ +HG  +++G +W+ F  NA
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGL--RDSSR-GKIIHGYLIKLGYDWDPFSANA 298

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK+G + DA ++F+  +  D+VSWN +++    ++   +A+  L QM   GI P+
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN 358

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +++S L AC+ + + + G+++H+  ++ D+  D  FV   LVDMY  C  +E  R  F
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMDMESD-LFVSVGLVDMYSKCDLLEDARMAF 417

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +K +  WNA+I+GY Q   D EAL LF++M +  G+  N TT+S+++ +    +  
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-EGIGFNQTTLSTILKSTAGLQVV 476

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +HG ++K G   D YV N+L+D Y +   +E ++ IF++  + D VS+ +MIT Y
Sbjct: 477 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 536

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              GQ  +AL L  EMQ+ME                  KP+     ++L  C  LSA  +
Sbjct: 537 AQYGQGEEALKLFLEMQDME-----------------LKPDRFVCSSLLNACANLSAFEQ 579

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK++H + ++     D+  G++LV+MYAKCG ++ A R F  +  R +++W+ +I     
Sbjct: 580 GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQ 639

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G++ L+L   M+ EG     V PN +T +++  AC+H+G+V+E    F  M++ +G 
Sbjct: 640 HGHGRQALQLFNQMLKEG-----VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 694

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYAC++DLLGRAGK+ +A +L+N MP E + A  W +LLGA RIH++VE+G  AA
Sbjct: 695 KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN-ASVWGALLGAARIHKDVELGRRAA 753

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + LF+LEP+ +  +VLL+NIY+SA  W+   +VR+ M++  V+KEPG SWIE  D+++ F
Sbjct: 754 EMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTF 813

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD SH +S++++  L+ LS+ M K GYVP     LH+V + EKE LL  HSEKLA+AF
Sbjct: 814 LVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 873

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G++ TP G  IRV KNLRVC DCH A K+I KI SREII+RD+ RFHHFK+G+CSCGDYW
Sbjct: 874 GLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 204/695 (29%), Positives = 343/695 (49%), Gaps = 52/695 (7%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           AIL+ I+  + +  P + ++  +L      + L  G QIHAH+ K G      ++ N L+
Sbjct: 42  AILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLS-DDPSIRNHLI 98

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           N+Y KC  +     K+ D  +E D VSW+++I+   + G    AL AF  M    V+ + 
Sbjct: 99  NLYSKC-RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNE 157

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           FT  SV  ACS +     LR+G+QVHG  +  G E + F+ N L+ MYAK     D+K L
Sbjct: 158 FTFSSVLKACSIVK---DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F    +R++VSWN + S   Q D   EAV    +M L GIKP+  S++S++ AC+ L   
Sbjct: 215 FDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDS 274

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             GK IH Y ++     D  F  +ALVDMY    ++     VF+ I    I  WNA+I G
Sbjct: 275 SRGKIIHGYLIKLGYDWD-PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
              +E+ E+AL L  +M+  +G+ PN  T+SS + AC           +H   +K+ +  
Sbjct: 334 CVLHEHHEQALELLGQMKR-SGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D +V   L+DMYS+   +E ++  F+ +  +D ++WN +I+GY+   +  +AL L  EM 
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                          E +     N  TL T+L     L  +   +++H  ++++   +D+
Sbjct: 453 K--------------EGI---GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 495

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            V ++L+D Y KC  +  A R+F+   + +++++  +I AY  +G+G+E L+L   M   
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM--- 552

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
             +  E+KP+     +L  AC++     +G  L   +   YG          +V++  + 
Sbjct: 553 --QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGNSLVNMYAKC 609

Query: 660 GKVEDAYQLINMMPPEFDKAG--AWSSLLGACRIHQNVEIGEIAAQ--NLFLLEPDVASH 715
           G ++DA +  +    E  + G  +WS+++G    H +   G  A Q  N  L E    +H
Sbjct: 610 GSIDDAGRAFS----ELTERGIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNH 662

Query: 716 YVLLS--------NIYSSAQLWDKAMDVRKKMKEM 742
             L+S         + + A+L+ ++M+     K M
Sbjct: 663 ITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 697



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 260/526 (49%), Gaps = 41/526 (7%)

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +I T+ +F +         ++   N  P+S   VS +   S       LR G Q+H +  
Sbjct: 27  LIQTVPQFSQDPQTTAILNLIDKGNFTPTS---VSYSKLLSQCCTTKSLRPGLQIHAHIT 83

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G   +  I N L+ +Y+K      A+ L     + DLVSW+ ++S  +QN     A+M
Sbjct: 84  KSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALM 143

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              +M L G+K +  + +SVL ACS ++ L  GK++H   + +    D  FV + LV MY
Sbjct: 144 AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD-VFVANTLVVMY 202

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C E    +R+FD I ++ +  WNA+ + Y Q ++  EA+ LF +M  ++G+ PN  ++
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEM-VLSGIKPNEFSL 261

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           SS+V AC         + IHG+ IKLG   D +  NAL+DMY+++G +  + ++F+ ++ 
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            D VSWN +I G  +   H  AL LL +M+       R+ +           PN  TL +
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMK-------RSGIC----------PNIFTLSS 364

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
            L  C  +     G+++H+  ++  + +D+ V   LVDMY+KC  L  AR  F+L+P ++
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +I WN II  Y  + E  E L L   M  EG     +  N+ T   +  +       + G
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMHKEG-----IGFNQTTLSTILKS-------TAG 472

Query: 630 MDLFYKMKDDYGIEPSPDHYA------CVVDLLGRAGKVEDAYQLI 669
           + + +  +  +G+      ++       ++D  G+   VEDA ++ 
Sbjct: 473 LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 329/811 (40%), Positives = 501/811 (61%), Gaps = 31/811 (3%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           I+ + FAFP+VLKA    +DL LGKQ+H  VV  G+  S   VAN+LV +Y KCG    D
Sbjct: 6   IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFD-SDEFVANSLVILYAKCGG-FGD 63

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FD I ++  VSWN++ +          A+  F  M+ S + P+ F+L S+   C+ 
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L   D ++ GR++HG  +++G + + F  NAL+ MYAK+G ++DA ++F      D+VSW
Sbjct: 124 L--EDSVQ-GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N I++    ++    A+  LR+M   G+ P+  +++S L AC+ + + + G+++H+  ++
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            D+  D SF+G  L+DMY  C  ++  R VF  + ++ +  WNA+I+G+ QNE DEEA  
Sbjct: 241 MDMGSD-SFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF  M    G+  N TT+S+V+ +    +A      IH  ++K G   D YV N+L+D Y
Sbjct: 300 LFPLMH-TEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G +E +  +F++  + D V + +++T Y   GQ  +AL L  EMQ            
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQ------------ 406

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
             D  +   KP+S    ++L  C +LSA  +GK++H + ++    +D+  G++LV+MYAK
Sbjct: 407 --DRGI---KPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAK 461

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG +  A   F  +PVR +++W+ +I     HG G+E L+L K M+  G     V PN +
Sbjct: 462 CGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVG-----VPPNHI 516

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           T +++  AC+H+G+V+E    F  MK  +GIEP  +HYAC++DLLGRAGK+E A +L+N 
Sbjct: 517 TLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNK 576

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP + + A  W +LLGA RIH+N+++GE AA+ L  LEP+ +  +VLL+NIY+S  +WDK
Sbjct: 577 MPFQAN-ALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDK 635

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              VR+ MK+  V+KEPG SW+E  D+++ F+ GD SH +S +++  L+ LS+ ++K GY
Sbjct: 636 VARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGY 695

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           VP     LH+V   EKE LL  HSEKLA+AFG++ TPPG  IRV KNLR+C DCH   KF
Sbjct: 696 VPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKF 755

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISKI SREII+RD  RFHHF+ G+CSCG+YW
Sbjct: 756 ISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 296/569 (52%), Gaps = 32/569 (5%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW         S+   EA+  + +M  S I+P+ F+  +++    G++D   G++I
Sbjct: 74  RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKI 133

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H +++K GY  S    AN LV+MY K G  + D   VFD I + D VSWN++IA      
Sbjct: 134 HGYLIKLGYD-SDAFSANALVDMYAKVGI-LEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTF 218
               ALE  R M  S + P+ FTL S   AC+ ++ R+   LGRQ+H + +++    ++F
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRE---LGRQLHSSLIKMDMGSDSF 248

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +   L+ MY+K   +DDA+ +FK   +RD+++WN ++S  SQN++  EA      M   G
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I  +  ++++VL + + L+     ++IHA +L++    DN +V ++L+D Y  C  VE  
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDN-YVVNSLIDTYGKCGHVEDA 367

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            RVF+      + L+ +++T Y Q+   EEAL L+++M++  G+ P++   SS++ AC  
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD-RGIKPDSFVCSSLLNACAS 426

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A+   + +H H +K G   D +  N+L++MY++ G IE +   F  + VR  VSW+ M
Sbjct: 427 LSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAM 486

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G    G   +AL L ++M                   +   PN ITL++VL  C    
Sbjct: 487 IGGLAQHGYGKEALQLFKQMLK-----------------VGVPPNHITLVSVLCACNHAG 529

Query: 519 ALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
            +A+ K  +  +++ +   + +    + ++D+  + G L  A  + + MP + N + W  
Sbjct: 530 LVAEAKH-YFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGA 588

Query: 576 IIMAYGMHGE---GQEVLELLKNMVAEGS 601
           ++ A  +H     G++  E+L  +  E S
Sbjct: 589 LLGAARIHKNIDLGEQAAEMLLALEPEKS 617



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 203/402 (50%), Gaps = 29/402 (7%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L GIK +  +  SVL AC+  + L  GK++H   +      D  FV ++LV +Y  C 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDE-FVANSLVILYAKCG 59

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
                R +FD I D+ +  WNA+ + Y  ++   EA+ LF  M  ++G+ PN  ++SS++
Sbjct: 60  GFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDM-VLSGIRPNEFSLSSMI 118

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
             C   E       IHG+ IKLG   D +  NAL+DMY+++G +E + ++FD++   D V
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN +I G  +   H  AL LLREM       N++ +           PN  TL + L  
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREM-------NKSGMC----------PNMFTLSSALKA 221

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  ++    G+++H+  I+  + +D  +G  L+DMY+KC  ++ AR VF LMP R++I W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  +  + E +E   L   M  EG   G  +    T +   AA   + M  +   L 
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGI--GFNQTTLSTVLKSIAALQANYMCRQIHALS 339

Query: 634 YKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMMP 673
            K   ++      D+Y    ++D  G+ G VEDA ++    P
Sbjct: 340 LKSGFEF------DNYVVNSLIDTYGKCGHVEDATRVFEESP 375



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 144/309 (46%), Gaps = 31/309 (10%)

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+  N     SV+ AC  ++     + +HG  +  G   D +V N+L+ +Y++ G    +
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           +++FD +  R  VSWN + + Y     HG+A+ L  +M                  +   
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDM-----------------VLSGI 107

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +PN  +L +++  C  L    +G++IH Y I+    +D    +ALVDMYAK G L  A  
Sbjct: 108 RPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS 167

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VFD +   ++++WN II    +H      LELL+ M   G     + PN  T  +   AC
Sbjct: 168 VFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG-----MCPNMFTLSSALKAC 222

Query: 621 SHSGMVSEGMDLFYKM-KDDYGIEPSPDHYACV--VDLLGRAGKVEDAYQLINMMPPEFD 677
           +   +   G  L   + K D G     D +  V  +D+  +   ++DA  +  +M PE D
Sbjct: 223 AGMALRELGRQLHSSLIKMDMG----SDSFLGVGLIDMYSKCNSMDDARLVFKLM-PERD 277

Query: 678 KAGAWSSLL 686
              AW++++
Sbjct: 278 MI-AWNAVI 285


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 337/840 (40%), Positives = 509/840 (60%), Gaps = 36/840 (4%)

Query: 49  LRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           L   +R+  FR+AI  ++E+ + +D+ PDNF  P V KA AG+ D+ LG+ +HA  +K G
Sbjct: 166 LSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAG 225

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
            G S   V N L+ MYGKCG  +    KVF+ +  ++ VSWNS++      G +      
Sbjct: 226 -GFSDAFVGNALIAMYGKCGF-VESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGV 283

Query: 168 FRMMLYSNVE---PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           F+ +L S  E   P   T+V+V  AC+ +     +R+G  VHG + ++G      + N+L
Sbjct: 284 FKRLLISEEEGLVPDVATMVTVIPACAAVGE---VRMGMVVHGLAFKLGITEEVTVNNSL 340

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPD 282
           + MY+K G + +A+ LF     +++VSWNTI+   S+   F      L++M     ++ +
Sbjct: 341 VDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVN 400

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++ +VLPACS    L + KEIH YA R+  L D   V +A V  Y  C  ++C  RVF
Sbjct: 401 EVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD-ELVANAFVAAYAKCSSLDCAERVF 459

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  K ++ WNA+I  + QN +  ++L LF+ M + +G+ P+  T+ S++ AC R +  
Sbjct: 460 CGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMD-SGMDPDRFTIGSLLLACARLKFL 518

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IHG  ++ GL  D ++  +LM +Y +   + + K IFD ME +  V WN MITG+
Sbjct: 519 RCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGF 578

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           +      +AL   R+M              L   +   KP  I +  VL  C  +SAL  
Sbjct: 579 SQNELPCEALDTFRQM--------------LSGGI---KPQEIAVTGVLGACSQVSALRL 621

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKE+H++A++  L+ D  V  AL+DMYAKCGC+  ++ +FD +  ++   WNVII  YG+
Sbjct: 622 GKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGI 681

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G + +EL + M  +G R     P+  TF+ +  AC+H+G+V+EG+    +M++ YG+
Sbjct: 682 HGHGLKAIELFELMQNKGGR-----PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGV 736

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYACVVD+LGRAG++ +A +L+N MP E D +G WSSLL +CR + ++EIGE  +
Sbjct: 737 KPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPD-SGIWSSLLSSCRNYGDLEIGEEVS 795

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + L  LEP+ A +YVLLSN+Y+    WD+   VR++MKE G+ K+ GCSWIE G  +++F
Sbjct: 796 KKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRF 855

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L  DGS  +S+++      L +++ K GY PDTSCVLH + EE K  +L  HSEKLAI+F
Sbjct: 856 LVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISF 915

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+LNT  GTT+RV KNLR+C DCH A K +SK+  R+II+RD +RFHHFKNG C+CGD+W
Sbjct: 916 GLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 313/633 (49%), Gaps = 43/633 (6%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           ++ SDI  +  A   +L+A    +++ +G+++HA V       + V ++  ++ MY  CG
Sbjct: 85  VSSSDISKE--AIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACG 142

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSV 186
           S   D   VFD   EKD   +N++++   R   +  A+  F  +L  +++ P +FTL  V
Sbjct: 143 SPS-DSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCV 201

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           A AC+ ++    + LG  VH  +L+ G + + F+ NAL+AMY K G V+ A  +F++  +
Sbjct: 202 AKACAGVAD---VELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRN 258

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL---RGIKPDGVSIASVLPACSHLEMLDTG 302
           R+LVSWN+++ + S+N  F E     +++ +    G+ PD  ++ +V+PAC+ +  +  G
Sbjct: 259 RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG 318

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
             +H  A +  I  +   V ++LVDMY  C  +   R +FD    K +  WN +I GY +
Sbjct: 319 MVVHGLAFKLGI-TEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSK 377

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
                    L  +M+    +  N  T+ +V+PAC         + IHG+A + G  +D  
Sbjct: 378 EGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDEL 437

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V NA +  Y++   ++ ++ +F  ME +   SWN +I  +   G  G +L L   M +  
Sbjct: 438 VANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSG 497

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            +                 P+  T+ ++L  C  L  L  GKEIH + +RN L  D  +G
Sbjct: 498 MD-----------------PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIG 540

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            +L+ +Y +C  +   + +FD M  ++++ WNV+I  +  +    E L+  + M++    
Sbjct: 541 ISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLS---- 596

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRA 659
            G +KP E+    +  ACS    +  G ++  + +K       S D +    ++D+  + 
Sbjct: 597 -GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHL----SEDAFVTCALIDMYAKC 651

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           G +E +  + + +  E D+A  W+ ++    IH
Sbjct: 652 GCMEQSQNIFDRV-NEKDEA-VWNVIIAGYGIH 682



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 263/533 (49%), Gaps = 61/533 (11%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSN-----VEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           +  LC  G  + AL     +L+S+     V  S  +  ++ +          + +GR+VH
Sbjct: 60  LHNLCDSGNLNDALN----LLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVH 115

Query: 207 G-----NSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
                 + LR    N  +++  ++AMY+  G   D++ +F + +++DL  +N ++S  S+
Sbjct: 116 ALVSASHKLR----NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSR 171

Query: 261 NDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           N  F +A+ +FL  ++   + PD  ++  V  AC+ +  ++ G+ +HA AL+     D +
Sbjct: 172 NALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSD-A 230

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--E 377
           FVG+AL+ MY  C  VE   +VF+ + ++ +  WN+++    +N    E   +F ++   
Sbjct: 231 FVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLIS 290

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E  GL P+  TM +V+PAC           +HG A KLG+  +  V N+L+DMYS+ G +
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++ +FD    ++ VSWNT+I GY+  G       LL+EMQ   EEK R          
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ--REEKVR---------- 398

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
                N +T++ VLP C     L   KEIH YA R+    D +V +A V  YAKC  L+ 
Sbjct: 399 ----VNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A RVF  M  + V +WN +I A+  +G   + L+L   M+  G     + P+  T  +L 
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSG-----MDPDRFTIGSLL 509

Query: 618 AACS-----------HSGMVSEGMDLFYKMKDDY-GIEPSPDHYACVVDLLGR 658
            AC+           H  M+  G++L     D++ GI     +  C   LLG+
Sbjct: 510 LACARLKFLRCGKEIHGFMLRNGLEL-----DEFIGISLMSLYIQCSSMLLGK 557



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + +   SW   + + A++    +++  ++ M  S + PD F   ++L A A ++ L  
Sbjct: 461 GMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRC 520

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK+IH  +++ G  L    +  +L+++Y +C S M     +FD++  K  V WN MI   
Sbjct: 521 GKEIHGFMLRNGLELDEF-IGISLMSLYIQC-SSMLLGKLIFDKMENKSLVCWNVMITGF 578

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +      AL+ FR ML   ++P    +  V  ACS +S    LRLG++VH  +L+    
Sbjct: 579 SQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVS---ALRLGKEVHSFALKAHLS 635

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+  AL+ MYAK G ++ ++ +F    ++D   WN I++    +   L+A+     M
Sbjct: 636 EDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELM 695

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +G +PD  +   VL AC+H  ++  G
Sbjct: 696 QNKGGRPDSFTFLGVLIACNHAGLVTEG 723


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 330/843 (39%), Positives = 519/843 (61%), Gaps = 35/843 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   L    R++ FR+A+  ++EM + ++  PDNF  P V+KA  G+ D+ LG+ +H   
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFA 222

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K    LS V V N L+ MYGK G  +    KVFD++ +++ VSWNS++      G ++ 
Sbjct: 223 LKTKV-LSDVFVGNALIAMYGKFGF-VESAVKVFDKMPQRNLVSWNSVMYACLENGVFEE 280

Query: 164 ALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
           +   F+ +L  +  + P   T+V+V   C+   R+  +RLG   HG +L++G      +N
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCA---RQGEVRLGMVFHGLALKLGLCGELKVN 337

Query: 222 A-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-I 279
           + L+ MY+K G + +A+ LF + E ++++SWN+++   S++  F  A   LR+M +   +
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           K + V++ +VLP C         KEIH YALR+  +  +  V +A V  Y  C  +    
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF  +  K ++ WNA+I G+ QN +  +AL L++ M   +GL P+  T++S++ AC R 
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG-SGLEPDLFTIASLLSACARL 515

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           ++    + IHG  ++ G   D ++  +L+ +Y + G+I ++K  FD+ME ++ V WNTMI
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            G++      DAL +  +M +                  +  P+ I+++  L  C  +SA
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSS-----------------KIWPDEISIIGALGACSQVSA 618

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GKE+H +A+++ L     V  +L+DMYAKCGC+  ++ +FD + ++  +TWNV+I  
Sbjct: 619 LRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITG 678

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           YG+HG G++ +EL K+M   G R     P+ VTFIAL  AC+H+G+V+EG++   +M+  
Sbjct: 679 YGIHGHGRKAIELFKSMQNAGFR-----PDSVTFIALLTACNHAGLVAEGLEYLGQMQSL 733

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           +GI+P  +HYACVVD+LGRAG++ +A +L+N +P + D +  WSSLL +CR +++++IGE
Sbjct: 734 FGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPD-SRIWSSLLSSCRNYRDLDIGE 792

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
             A  L  L PD A +YVL+SN Y+    WD+   +R++MKE+G++K+ GCSWIE G ++
Sbjct: 793 KVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKV 852

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
            +FL GD S  QS ++      L +++ K GY PDTSCVLH + E+EK  +L  HSEKLA
Sbjct: 853 SRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLA 912

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           I+FG+LNT  GTT+RV KNLR+C DCH A K +SKI+ REII+RD +RFHHFKNG CSCG
Sbjct: 913 ISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCG 972

Query: 880 DYW 882
           DYW
Sbjct: 973 DYW 975



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 181/715 (25%), Positives = 324/715 (45%), Gaps = 63/715 (8%)

Query: 7   CLTLLPSPPLS-SLQTHQ-----------------PPATTATSLPLPGSQTRCKESWIES 48
           C   L  PPLS S   H                  PP ++    P+  S  + +++  + 
Sbjct: 2   CSVTLTPPPLSFSFHHHHNLTLQNINNKIPFHSFTPPKSSHLFSPIISSHKK-QQNASKH 60

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPA-----VLKAVAGIQDLSLGKQIHAHV 103
             +   +    +A  ++++   +D+   + + P      +L+     +++ +G++IH  +
Sbjct: 61  FHNLCNTGNLNQA-FNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFI 119

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
               +  + V +   LV MY  C S  +D   VF+    K+   WN++++   R   +  
Sbjct: 120 STSPHFQNDVVLITRLVTMYSICDSP-YDSCLVFNASRRKNLFLWNALLSGYLRNSLFRD 178

Query: 164 ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
           A+  F  M+  +   P +FTL  V  AC  +     +RLG  VHG +L+     + F+ N
Sbjct: 179 AVFVFVEMISLTEFVPDNFTLPCVIKACVGVY---DVRLGEAVHGFALKTKVLSDVFVGN 235

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGI 279
           AL+AMY K G V+ A  +F     R+LVSWN+++ +  +N  F E+    + +     G+
Sbjct: 236 ALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGL 295

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD  ++ +V+P C+    +  G   H  AL+   L     V S+L+DMY  C  +   R
Sbjct: 296 MPDVATMVTVIPLCARQGEVRLGMVFHGLALKLG-LCGELKVNSSLLDMYSKCGYLCEAR 354

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +FD  ++K +  WN+MI GY ++     A  L  KM+    +  N  T+ +V+P C   
Sbjct: 355 VLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413

Query: 400 EAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             F   + IHG+A++ G +  D  V NA +  Y++ G +  ++ +F  ME +   SWN +
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+   G    AL L   M+    E                 P+  T+ ++L  C  L 
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLE-----------------PDLFTIASLLSACARLK 516

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L+ GKEIH   +RN    D  +  +LV +Y +CG +  A+  FD M  +N++ WN +I 
Sbjct: 517 SLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMIN 576

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            +  +    + L++   M++      ++ P+E++ I    ACS    +  G +L      
Sbjct: 577 GFSQNEFPFDALDMFHQMLSS-----KIWPDEISIIGALGACSQVSALRLGKELHCFAVK 631

Query: 639 DYGIEPSPDHYAC-VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +  E S     C ++D+  + G +E +  + + +         W+ L+    IH
Sbjct: 632 SHLTEHS--FVTCSLIDMYAKCGCMEQSQNIFDRV--HLKGEVTWNVLITGYGIH 682



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 143/270 (52%), Gaps = 6/270 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G +++   SW   +    ++   R+A+  Y+ M  S ++PD F   ++L A A ++ LS 
Sbjct: 461 GMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC 520

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK+IH  +++ G+ L    +  +LV++Y +CG  +      FD + EK+ V WN+MI   
Sbjct: 521 GKEIHGSMLRNGFELDEF-ICISLVSLYVQCGKILL-AKLFFDNMEEKNLVCWNTMINGF 578

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +      AL+ F  ML S + P   +++    ACS +S    LRLG+++H  +++    
Sbjct: 579 SQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVS---ALRLGKELHCFAVKSHLT 635

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            ++F+  +L+ MYAK G ++ ++ +F     +  V+WN +++    +    +A+   + M
Sbjct: 636 EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSM 695

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
              G +PD V+  ++L AC+H  ++  G E
Sbjct: 696 QNAGFRPDSVTFIALLTACNHAGLVAEGLE 725


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  620 bits (1599), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 329/844 (38%), Positives = 506/844 (59%), Gaps = 36/844 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   + +  R+  F +A+  + E+ + ++ +PDNF  P V+KA AG+ DL LG+ IH   
Sbjct: 68  WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 127

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    +S V V N L+ MYGKCG  + +  KVF+ + E++ VSWNS+I      G    
Sbjct: 128 TKMDL-VSDVFVGNALIAMYGKCGL-VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQE 185

Query: 164 ALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
           +  AFR ML    +  P   TLV+V   C+     + +  G  VHG ++++G      + 
Sbjct: 186 SFNAFREMLVGEESFVPDVATLVTVLPVCAG---EEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           N+L+ MY+K   + +A+ LF   + +++VSWN+++   ++ +        L++M      
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +K D  +I +VLP C     L + KE+H Y+ R+  L  N  V +A +  Y  C  +   
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHG-LQSNELVANAFIAAYTRCGALCSS 361

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            RVFD +  K ++ WNA++ GY QN    +AL L+++M + +GL P+  T+ S++ AC R
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTD-SGLDPDWFTIGSLLLACSR 420

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            ++    E IHG A++ GL  D ++  +L+ +Y   G+   ++ +FD ME R  VSWN M
Sbjct: 421 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 480

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I GY+  G   +A+ L R+M              L + +   +P  I +M V   C  LS
Sbjct: 481 IAGYSQNGLPDEAINLFRQM--------------LSDGI---QPYEIAIMCVCGACSQLS 523

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  GKE+H +A++  L  D+ V S+++DMYAK GC+  ++R+FD +  ++V +WNVII 
Sbjct: 524 ALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIA 583

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            YG+HG G+E LEL + M+  G     +KP++ TF  +  ACSH+G+V +G++ F +M +
Sbjct: 584 GYGIHGRGKEALELFEKMLRLG-----LKPDDFTFTGILMACSHAGLVEDGLEYFNQMLN 638

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            + IEP  +HY CVVD+LGRAG+++DA +LI  MP + D +  WSSLL +CRIH N+ +G
Sbjct: 639 LHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD-SRIWSSLLSSCRIHGNLGLG 697

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E  A  L  LEP+   +YVL+SN+++ +  WD    VR +MK++G++K+ GCSWIE G +
Sbjct: 698 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 757

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H FL GD    + E++      L  ++   GY PDT  VLH++ EE+K  +L GHSEKL
Sbjct: 758 VHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKL 817

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AI+FG+LNT  G  +RV KNLR+C DCH A KFISK+ +R+I++RD +RFHHF++G CSC
Sbjct: 818 AISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSC 877

Query: 879 GDYW 882
           GDYW
Sbjct: 878 GDYW 881



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/646 (27%), Positives = 324/646 (50%), Gaps = 55/646 (8%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
            +L+A    +D+ +G+++H  V       +   +   ++ MY  CGS   D   VFD++ 
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPS-DSRMVFDKLR 61

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLR 200
            K+   WN++++   R   ++ A+  F  ++  +  +P +FTL  V  AC+ L     L 
Sbjct: 62  RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLL---DLG 118

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           LG+ +HG + ++    + F+ NAL+AMY K G V++A  +F+   +R+LVSWN+I+   S
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFS 178

Query: 260 QNDKFLEAVMFLRQMAL--RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA----LRND 313
           +N    E+    R+M +      PD  ++ +VLP C+  E ++ G  +H  A    L  +
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           ++++NS     L+DMY  CR +   + +FD    K I  WN+MI GY + E       L 
Sbjct: 239 LMVNNS-----LIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLL 293

Query: 374 IKME-EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
            KM+ E A +  +  T+ +V+P C+        + +HG++ + GL  +  V NA +  Y+
Sbjct: 294 QKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYT 353

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R G +  S+ +FD M+ +   SWN ++ GY                QN +  K  +    
Sbjct: 354 RCGALCSSERVFDLMDTKTVSSWNALLCGYA---------------QNSDPRKALDLYLQ 398

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
           + ++ L   P+  T+ ++L  C  + +L  G+EIH +A+RN LA D  +G +L+ +Y  C
Sbjct: 399 MTDSGL--DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICC 456

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G    A+ +FD M  R++++WNV+I  Y  +G   E + L + M+++G     ++P E+ 
Sbjct: 457 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG-----IQPYEIA 511

Query: 613 FIALFAACSHSGMVSEGMDLF-----YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            + +  ACS    +  G +L        + +D  +  S      ++D+  + G +  + +
Sbjct: 512 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSS------IIDMYAKGGCIGLSQR 565

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH-QNVEIGEIAAQNLFL-LEPD 711
           + + +  +     +W+ ++    IH +  E  E+  + L L L+PD
Sbjct: 566 IFDRLREK--DVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 609



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 144/267 (53%), Gaps = 6/267 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T+   SW   L   A+++  R+A+  Y++MT S + PD F   ++L A + ++ L  G++
Sbjct: 370 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 429

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IH   ++ G  +    +  +L+++Y  CG   +    +FD +  +  VSWN MIA   + 
Sbjct: 430 IHGFALRNGLAVDPF-IGISLLSLYICCGKP-FAAQVLFDGMEHRSLVSWNVMIAGYSQN 487

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G  D A+  FR ML   ++P    ++ V  ACS LS    LRLG+++H  +L+     + 
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS---ALRLGKELHCFALKAHLTEDI 544

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ ++++ MYAK G +  ++ +F    ++D+ SWN I++    + +  EA+    +M   
Sbjct: 545 FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 604

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKE 304
           G+KPD  +   +L ACSH  +++ G E
Sbjct: 605 GLKPDDFTFTGILMACSHAGLVEDGLE 631



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 12/234 (5%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           A  +   G + R   SW   +   +++    EAI  + +M    IQP   A   V  A +
Sbjct: 461 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS 520

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
            +  L LGK++H   +K  +    + V++++++MY K G  +    ++FDR+ EKD  SW
Sbjct: 521 QLSALRLGKELHCFALK-AHLTEDIFVSSSIIDMYAKGGC-IGLSQRIFDRLREKDVASW 578

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQ--- 204
           N +IA     G+   ALE F  ML   ++P  FT   + +ACS+     DGL    Q   
Sbjct: 579 NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLN 638

Query: 205 VHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           +H    ++  +   +      M  + GR+DDA  L +    D D   W++++SS
Sbjct: 639 LHNIEPKLEHYTCVV-----DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 687


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 337/822 (40%), Positives = 483/822 (58%), Gaps = 33/822 (4%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +L Y+   R   Q D++ +  +L++    +DL++GKQ+H H+++ G    +V + NTL+ 
Sbjct: 15  VLQYLH--RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK-PNVYITNTLLK 71

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           +Y  CGS + +  ++FD+ + K  VSWN MI+     G    A   F +M    +EP  F
Sbjct: 72  LYAHCGS-VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKF 130

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLF 240
           T VS+  ACS+ +    L  GR++H   +  G  N T + NAL++MYAK G V DA+ +F
Sbjct: 131 TFVSILSACSSPAV---LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
            +   RD VSW T+  + +++    E++     M    ++P  ++  +VL AC  L  L+
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            GK+IHA+ + ++   D   V +AL  MY  C   +  R VF+ +S + +  WN MI G+
Sbjct: 248 KGKQIHAHIVESEYHSDVR-VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGF 306

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
             +   EEA   F +M E  G+ P+  T ++V+ AC R       + IH  A K GL  D
Sbjct: 307 VDSGQLEEAHGTFHRMLE-EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSD 365

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
               NAL++MYS+ G ++ ++ +FD M  RD VSW T++  Y  C Q  ++    ++M  
Sbjct: 366 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQM-- 423

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                       L + V   K N IT M VL  C    AL  GKEIHA  ++  L  D+ 
Sbjct: 424 ------------LQQGV---KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLA 468

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           V +AL+ MY KCG +  A RVF+ M +R+V+TWN +I   G +G G E L+  + M +EG
Sbjct: 469 VTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEG 528

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
            R     PN  TF+ + +AC    +V EG   F  M  DYGI P+  HYAC+VD+L RAG
Sbjct: 529 MR-----PNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAG 583

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            + +A  +I  +P +   A  W +LL ACRIH NVEIGE AA++   LEP  A  YV LS
Sbjct: 584 HLREAEDVILTIPLK-PSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLS 642

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            IY++A +W     +RK MKE GV+KEPG SWIE   E+H F+A D SH ++++++  LE
Sbjct: 643 AIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELE 702

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L ++M+  GYVPDT  V+H++++E KE  +C HSEKLAIA+G+++TPPGT IR++KNLR
Sbjct: 703 TLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLR 762

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH ATKFISKI  REII RD  RFHHFKNG CSCGDYW
Sbjct: 763 VCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 176/613 (28%), Positives = 300/613 (48%), Gaps = 48/613 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A     +EA   +  M +  ++PD F F ++L A +    L+ G++IH  V
Sbjct: 96  SWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRV 155

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   +  TV N L++MY KCGS + D  +VFD +  +D+VSW ++       G  + 
Sbjct: 156 MEAGLA-NDTTVGNALISMYAKCGS-VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMN 221
           +L+ +  ML   V PS  T ++V  AC +L+    L  G+Q+H + +   E+++   +  
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLA---ALEKGKQIHAHIVE-SEYHSDVRVST 269

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL  MY K G   DA+ +F+    RD+++WNT++     + +  EA     +M   G+ P
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  +  +VL AC+    L  GKEIHA A ++ ++ D  F G+AL++MY     ++  R+V
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF-GNALINMYSKAGSMKDARQV 388

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  + +  W  ++  Y   +   E+   F +M +  G+  N  T   V+ AC    A
Sbjct: 389 FDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ-QGVKANKITYMCVLKACSNPVA 447

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH   +K GL  D  V NALM MY + G +E +  +F+ M +RD V+WNT+I G
Sbjct: 448 LKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGG 507

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               GQ+G  L  L+  + M+ E  R              PN+ T + VL  C   + + 
Sbjct: 508 L---GQNGRGLEALQRYEVMKSEGMR--------------PNAATFVNVLSACRVCNLVE 550

Query: 522 KGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
           +G+   A+  ++  ++ T+    + +VD+ A+ G L  A  V   +P++ +   W  ++ 
Sbjct: 551 EGRRQFAFMSKDYGIVPTEKHY-ACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLA 609

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGE----VKP-NEVTFIALFAACSHSGMVSEGMDLF 633
           A  +H             V  G R  E    ++P N   +++L A  + +GM  +   L 
Sbjct: 610 ACRIHCN-----------VEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLR 658

Query: 634 YKMKDDYGIEPSP 646
             MK+  G++  P
Sbjct: 659 KFMKER-GVKKEP 670



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 191/359 (53%), Gaps = 8/359 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           +R + SW     + A S    E++ +Y  M +  ++P    +  VL A   +  L  GKQ
Sbjct: 192 SRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQ 251

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IHAH+V+  Y  S V V+  L  MY KCG+   D  +VF+ ++ +D ++WN+MI      
Sbjct: 252 IHAHIVESEYH-SDVRVSTALTKMYMKCGA-FKDAREVFECLSYRDVIAWNTMIRGFVDS 309

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G+ + A   F  ML   V P   T  +V  AC   +R  GL  G+++H  + + G   + 
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSAC---ARPGGLARGKEIHARAAKDGLVSDV 366

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
              NAL+ MY+K G + DA+ +F     RD+VSW T++   +  D+ +E+    +QM  +
Sbjct: 367 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQ 426

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+K + ++   VL ACS+   L  GKEIHA  ++  +L D + V +AL+ MY  C  VE 
Sbjct: 427 GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLA-VTNALMSMYFKCGSVED 485

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             RVF+ +S + +  WN +I G GQN    EAL  +  M+   G+ PNA T  +V+ AC
Sbjct: 486 AIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKS-EGMRPNAATFVNVLSAC 543


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 343/840 (40%), Positives = 484/840 (57%), Gaps = 30/840 (3%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   A   + +EA   +++M R    P+++ + ++L A A    L   K++H+H 
Sbjct: 287  SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            V  G  L  + V N LV+MY K GS + D   VFD +TE+D  SW  MI  L + G+   
Sbjct: 347  VNAGLALD-LRVGNALVHMYAKSGS-IDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQE 404

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
            A   F  M  +   P+  T +S+ L  S ++    L   + VH ++   G  +   I NA
Sbjct: 405  AFSLFLQMQRNGCLPNLTTYLSI-LNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNA 463

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYAK G +DDA+ +F    DRD++SWN ++  L+QN    EA     QM   G+ PD
Sbjct: 464  LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPD 523

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
              +  S+L      + L+   E+H +A+    LI +  VGSA + MY  C  ++  R +F
Sbjct: 524  STTYLSLLNTHGSTDALEWVNEVHKHAVETG-LISDFRVGSAFIHMYIRCGSIDDARLLF 582

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            D +S + +  WNAMI G  Q     EAL LF++M+   G  P+ATT  +++ A V  EA 
Sbjct: 583  DKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQR-EGFIPDATTFINILSANVDEEAL 641

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
               + +H HA   GL  D  V NAL+  YS+ G ++ +K +FDDM  R+  +W  MI G 
Sbjct: 642  EWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGL 700

Query: 463  TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               G   DA     +M              L E ++   P++ T +++L  C +  AL  
Sbjct: 701  AQHGCGHDAFSHFLQM--------------LREGIV---PDATTYVSILSACASTGALEW 743

Query: 523  GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
             KE+H +A+   L +D+ VG+ALV MYAKCG ++ AR VFD M  R+V +W V+I     
Sbjct: 744  VKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQ 803

Query: 583  HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            HG G E L+    M +EG      KPN  +++A+  ACSH+G+V EG   F  M  DYGI
Sbjct: 804  HGRGLEALDFFVKMKSEG-----FKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI 858

Query: 643  EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            EP+ +HY C+VDLLGRAG +E+A   I  MP E D A  W +LLGAC  + N+E+ E AA
Sbjct: 859  EPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDA-PWGALLGACVTYGNLEMAEFAA 917

Query: 703  QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            +    L+P  AS YVLLSNIY++   W++ + VR  M+  G+RKEPG SWIE  + IH F
Sbjct: 918  KERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSF 977

Query: 763  LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
            + GD SH +S++++  L +L ER++ +GYVPDT  VL N ++E KE  LC HSEKLAI +
Sbjct: 978  VVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVY 1037

Query: 823  GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G+++T     IRV KNLRVC+DCH ATKFISKI  REI+ RD +RFHHFK+G CSCGDYW
Sbjct: 1038 GLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 196/653 (30%), Positives = 328/653 (50%), Gaps = 40/653 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A      +A+  Y +M +   QP+   + ++LKA     +L  GK+IHAH++
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+  S V V   LVNMY KCGS + D   +FD++ E++ +SW  MI  L  +G+   A
Sbjct: 247 QSGFQ-SDVRVETALVNMYVKCGS-IEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEA 304

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              F  M      P+S+T VS+  A ++      L   ++VH +++  G   +  + NAL
Sbjct: 305 FHLFLQMQREGFIPNSYTYVSILNANASAG---ALEWVKEVHSHAVNAGLALDLRVGNAL 361

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +DDA+ +F    +RD+ SW  ++  L+Q+ +  EA     QM   G  P+ 
Sbjct: 362 VHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNL 421

Query: 284 VSIASVL--PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            +  S+L   A +    L+  K +H +A     + D   +G+AL+ MY  C  ++  R V
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR-IGNALIHMYAKCGSIDDARLV 480

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + D+ +  WNAM+ G  QN    EA  +F++M++  GL P++TT  S++     ++A
Sbjct: 481 FDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ-EGLVPDSTTYLSLLNTHGSTDA 539

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +H HA++ GL  D  V +A + MY R G I+ ++ +FD + VR   +WN MI G
Sbjct: 540 LEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGG 599

Query: 462 YTI--CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
                CG+  +AL L  +MQ               E  +   P++ T + +L       A
Sbjct: 600 AAQQRCGR--EALSLFLQMQR--------------EGFI---PDATTFINILSANVDEEA 640

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L   KE+H++A    L  D+ VG+ALV  Y+KCG + +A++VFD M  RNV TW ++I  
Sbjct: 641 LEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG 699

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
              HG G +       M+ EG     + P+  T++++ +AC+ +G + E +   +     
Sbjct: 700 LAQHGCGHDAFSHFLQMLREG-----IVPDATTYVSILSACASTGAL-EWVKEVHNHAVS 753

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            G+         +V +  + G ++DA  + + M        +W+ ++G    H
Sbjct: 754 AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVER--DVFSWTVMIGGLAQH 804



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/550 (30%), Positives = 283/550 (51%), Gaps = 32/550 (5%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           I  D+F++  +L+     +D+ L KQ+H  ++K G    ++ VAN L+ +Y +CG  +  
Sbjct: 114 IAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGME-QNLYVANKLLRVYIRCGR-LQC 171

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             +VFD++ +K+   W +MI     +G  + A+  +  M     +P+  T +S+  AC  
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                 L+ G+++H + ++ G + +  +  AL+ MY K G ++DA+ +F    +R+++SW
Sbjct: 232 PVN---LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW 288

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             ++  L+   +  EA     QM   G  P+  +  S+L A +    L+  KE+H++A+ 
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             + +D   VG+ALV MY     ++  R VFD ++++ I  W  MI G  Q+   +EA  
Sbjct: 349 AGLALDLR-VGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFS 407

Query: 372 LFIKMEEVAGLWPNATTMSSVV--PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           LF++M+   G  PN TT  S++   A   + A    + +H HA + G   D  + NAL+ 
Sbjct: 408 LFLQMQR-NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIH 466

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY++ G I+ ++ +FD M  RD +SWN M+ G    G   +A  +  +MQ          
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ--------- 517

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                E ++   P+S T +++L   G+  AL    E+H +A+   L +D  VGSA + MY
Sbjct: 518 -----EGLV---PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMY 569

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            +CG ++ AR +FD + VR+V TWN +I        G+E L L   M  EG       P+
Sbjct: 570 IRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREG-----FIPD 624

Query: 610 EVTFIALFAA 619
             TFI + +A
Sbjct: 625 ATTFINILSA 634



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 32/344 (9%)

Query: 354 NAMITGYGQNEYD-----EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
           NA + G  +  ++     +   ML I++++  G+  ++ +  +++  C++ E     + +
Sbjct: 83  NASVDGAAEQTHNVITAKDAVAMLKIRVQQ--GIAIDSFSYVNILQRCLKQEDILLAKQV 140

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H   IK G+ ++ YV N L+ +Y R GR++ ++ +FD +  ++   W TMI GY   G  
Sbjct: 141 HVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHA 200

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            DA+   R    M +E                +PN IT +++L  C     L  GK+IHA
Sbjct: 201 EDAM---RVYDKMRQECG--------------QPNEITYLSILKACCCPVNLKWGKKIHA 243

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           + I++   +DV V +ALV+MY KCG +  A+ +FD M  RNVI+W V+I     +G GQE
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
              L   M  EG       PN  T++++  A + +G + E +   +    + G+      
Sbjct: 304 AFHLFLQMQREG-----FIPNSYTYVSILNANASAGAL-EWVKEVHSHAVNAGLALDLRV 357

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
              +V +  ++G ++DA  + + M        +W+ ++G    H
Sbjct: 358 GNALVHMYAKSGSIDDARVVFDGMTER--DIFSWTVMIGGLAQH 399


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 328/842 (38%), Positives = 509/842 (60%), Gaps = 35/842 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++    EA+L + EM    ++ + F FP+VLKA +  +DL++G+++H   
Sbjct: 49  SWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMA 108

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+  S   VANTLV MY KCG  + D  ++F  I E++ VSWN++ +   +      
Sbjct: 109 VVTGFE-SDGFVANTLVVMYAKCGL-LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGE 166

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F+ M+ S + P+ F++  +  AC+ L   D   LGR++HG  L++G + + F  NA
Sbjct: 167 AVGLFKEMVRSGIMPNEFSISIILNACAGLQEGD---LGRKIHGLMLKMGLDLDQFSANA 223

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K G ++ A  +F+     D+VSWN I++    +D    A+M L +M   G +P+
Sbjct: 224 LVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPN 283

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +++S L AC+ +   + G+++H+  ++ D   D  F    LVDMY  C  ++  RR +
Sbjct: 284 MFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSD-LFAAVGLVDMYSKCEMMDDARRAY 342

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSE 400
           D +  K I  WNA+I+GY Q     +A+ LF KM  E++     N TT+S+V+ +    +
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDID---FNQTTLSTVLKSVASLQ 399

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + IH  +IK G+  D YV N+L+D Y +   I+ +  IF++    D V++ +MIT
Sbjct: 400 AIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMIT 459

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y+  G   +AL L  +MQ+ +                  KP+     ++L  C  LSA 
Sbjct: 460 AYSQYGDGEEALKLYLQMQDAD-----------------IKPDPFICSSLLNACANLSAY 502

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            +GK++H +AI+     D+   ++LV+MYAKCG +  A R F  +P R +++W+ +I  Y
Sbjct: 503 EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGY 562

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG G+E L L   M+ +G     V PN +T +++  AC+H+G+V+EG   F KM+  +
Sbjct: 563 AQHGHGKEALRLFNQMLRDG-----VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF 617

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GI+P+ +HYAC++DLLGR+GK+ +A +L+N +P E D    W +LLGA RIH+N+E+G+ 
Sbjct: 618 GIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEAD-GFVWGALLGAARIHKNIELGQK 676

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ LF LEP+ +  +VLL+NIY+SA +W+    VRK MK+  V+KEPG SWIE  D+++
Sbjct: 677 AAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVY 736

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F+ GD SH +S++++  L+ L + + K GY       +HNV++ EKE LL  HSEKLA+
Sbjct: 737 TFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAV 796

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG++ TPPG  IRV KNLR+C DCH   KF+ KI SREII+RD+ RFHHFK+G+CSCGD
Sbjct: 797 AFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGD 856

Query: 881 YW 882
           YW
Sbjct: 857 YW 858



 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 316/597 (52%), Gaps = 35/597 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++HAH++K+G+     ++ N LV +Y KC    +   K+ D  +E D VSW+S+++   +
Sbjct: 2   ELHAHLIKFGFSRDP-SLRNHLVTLYSKCRRFGY-ARKLVDESSELDVVSWSSLLSGYVQ 59

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G  + AL  F  M    V+ + FT  SV  ACS   +RD L +GR+VHG ++  G E +
Sbjct: 60  NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACS--MKRD-LNMGRKVHGMAVVTGFESD 116

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ N L+ MYAK G +DD++ LF    +R++VSWN + S   Q++   EAV   ++M  
Sbjct: 117 GFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVR 176

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI P+  SI+ +L AC+ L+  D G++IH   L+  + +D  F  +ALVDMY    E+E
Sbjct: 177 SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQ-FSANALVDMYSKAGEIE 235

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               VF  I+   +  WNA+I G   ++ ++ ALML  +M+  +G  PN  T+SS + AC
Sbjct: 236 GAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG-SGTRPNMFTLSSALKAC 294

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                      +H   IK+    D +    L+DMYS+   ++ ++  +D M  +D ++WN
Sbjct: 295 AAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWN 354

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            +I+GY+ CG H DA+ L  +M +           D+D        N  TL TVL    +
Sbjct: 355 ALISGYSQCGDHLDAVSLFSKMFS----------EDID-------FNQTTLSTVLKSVAS 397

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L A+   K+IH  +I++ + +D  V ++L+D Y KC  ++ A ++F+     +++ +  +
Sbjct: 398 LQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSM 457

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL-FYK 635
           I AY  +G+G+E L+L   M     +  ++KP+     +L  AC++     +G  L  + 
Sbjct: 458 ITAYSQYGDGEEALKLYLQM-----QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHA 512

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +K  +G          +V++  + G +EDA +  + +P       +WS+++G    H
Sbjct: 513 IK--FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR--GIVSWSAMIGGYAQH 565


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/840 (40%), Positives = 491/840 (58%), Gaps = 30/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A   + +EA   +++M R    P+++ + ++L A A    L   K++H+H 
Sbjct: 98  SWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 157

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G  L  + V N LV+MY K GS + D   VFD + E+D  SW  MI  L + G+   
Sbjct: 158 VNAGLALD-LRVGNALVHMYAKSGS-IDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A   F  M      P+  T +S+ L  S ++    L   ++VH ++ + G  +   + NA
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSI-LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNA 274

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +DDA+ +F    DRD++SWN ++  L+QN    EA     +M   G  PD
Sbjct: 275 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD 334

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  S+L         +  KE+H +A+    L+ +  VGSA V MY  C  ++  + +F
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVG-LVSDLRVGSAFVHMYIRCGSIDDAQLIF 393

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D ++ + +  WNAMI G  Q +   EAL LF++M    G +P+ATT  +++ A V  EA 
Sbjct: 394 DKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR-EGFFPDATTFVNILSANVGEEAL 452

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +H +AI  GL  D  V NAL+ MY++ G    +K +FDDM  R+  +W  MI+G 
Sbjct: 453 EWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGL 511

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G   +A  L  +M              L E ++   P++ T +++L  C +  AL  
Sbjct: 512 AQHGCGHEAFSLFLQM--------------LREGIV---PDATTYVSILSACASTGALEW 554

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            KE+H++A+   L +D+ VG+ALV MYAKCG ++ ARRVFD M  R+V +W V+I     
Sbjct: 555 VKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQ 614

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G + L+L   M  EG      KPN  +F+A+ +ACSH+G+V EG   F  +  DYGI
Sbjct: 615 HGRGLDALDLFVKMKLEG-----FKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGI 669

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           EP+ +HY C+VDLLGRAG++E+A   I  MP E   A  W +LLGAC  + N+E+ E AA
Sbjct: 670 EPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDA-PWGALLGACVTYGNLEMAEFAA 728

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           +    L+P  AS YVLLSNIY++   W++ + VR  M+  G+RKEPG SWIE  ++IH F
Sbjct: 729 KERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSF 788

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           + GD SH +S++++  L++L +R++ EGYVPDT  VL N ++E KE  LC HSEKLAI +
Sbjct: 789 VVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVY 848

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+++TP    IRV KNLRVC+DCH ATKFISK+  REI+ RD +RFHHFK+G CSCGDYW
Sbjct: 849 GLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/638 (32%), Positives = 333/638 (52%), Gaps = 40/638 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  Y +M R   QP+   + ++LKA      L  GK+IHAH+++ G+  S V V   L
Sbjct: 13  DAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGF-QSDVRVETAL 71

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           VNMY KCGS + D   +FD++ E++ +SW  MI  L  +G+   A   F  M      P+
Sbjct: 72  VNMYVKCGS-IDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPN 130

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           S+T VS+  A ++      L   ++VH +++  G   +  + NAL+ MYAK G +DDA+ 
Sbjct: 131 SYTYVSILNANASAG---ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 187

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL--PACSHL 296
           +F    +RD+ SW  ++  L+Q+ +  EA     QM   G  P+  +  S+L   A +  
Sbjct: 188 VFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITST 247

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L+  KE+H +A +   + D   VG+AL+ MY  C  ++  R VFD + D+ +  WNAM
Sbjct: 248 GALEWVKEVHKHAGKAGFISDLR-VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAM 306

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I G  QN    EA  +F+KM++  G  P++TT  S++   V + A+   + +H HA+++G
Sbjct: 307 IGGLAQNGCGHEAFTIFLKMQQ-EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVG 365

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT--ICGQHGDALML 474
           L  D  V +A + MY R G I+ ++ IFD + VR+  +WN MI G     CG+  +AL L
Sbjct: 366 LVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR--EALSL 423

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             +M+       R   +          P++ T + +L       AL   KE+H+YAI   
Sbjct: 424 FLQMR-------REGFF----------PDATTFVNILSANVGEEALEWVKEVHSYAIDAG 466

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           L  D+ VG+ALV MYAKCG   +A++VFD M  RNV TW V+I     HG G E   L  
Sbjct: 467 L-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFL 525

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M+ EG     + P+  T++++ +AC+ +G + E +   +    + G+         +V 
Sbjct: 526 QMLREG-----IVPDATTYVSILSACASTGAL-EWVKEVHSHAVNAGLVSDLRVGNALVH 579

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +  + G V+DA ++ + M        +W+ ++G    H
Sbjct: 580 MYAKCGSVDDARRVFDDMLER--DVYSWTVMIGGLAQH 615



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 238/472 (50%), Gaps = 30/472 (6%)

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           MI     +G  + A++ +  M     +P+  T +S+  AC +      L+ G+++H + +
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPV---SLKWGKKIHAHII 57

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G + +  +  AL+ MY K G +DDA+ +F    +R+++SW  ++  L+   +  EA  
Sbjct: 58  QSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 117

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              QM   G  P+  +  S+L A +    L+  KE+H++A+   + +D   VG+ALV MY
Sbjct: 118 RFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLR-VGNALVHMY 176

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                ++  R VFD + ++ I  W  MI G  Q+   +EA  LF++ME   G  PN TT 
Sbjct: 177 AKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMER-GGCLPNLTTY 235

Query: 390 SSVV--PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            S++   A   + A    + +H HA K G   D  V NAL+ MY++ G I+ ++ +FD M
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD +SWN MI G    G   +A  +  +MQ               E  +   P+S T 
Sbjct: 296 CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ--------------EGFV---PDSTTY 338

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L    +  A    KE+H +A+   L +D+ VGSA V MY +CG ++ A+ +FD + V
Sbjct: 339 LSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV 398

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RNV TWN +I        G+E L L   M  EG       P+  TF+ + +A
Sbjct: 399 RNVTTWNAMIGGVAQQKCGREALSLFLQMRREG-----FFPDATTFVNILSA 445



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 232/512 (45%), Gaps = 70/512 (13%)

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MI GY +  Y E+A+ ++ +M    G  PN  T  S++ AC    +    + IH H I+ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQ-PNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G   D  V+ AL++MY + G I+ ++ IFD M  R+ +SW  MI G    G+  +A    
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +MQ               E  +   PNS T +++L    +  AL   KE+H++A+   L
Sbjct: 120 LQMQR--------------EGFI---PNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 162

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           A D+ VG+ALV MYAK G ++ AR VFD M  R++ +W V+I     HG GQE   L   
Sbjct: 163 ALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 222

Query: 596 MVAEGSRGGEVKPNEVTFIALF--AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           M     RGG + PN  T++++   +A + +G + E +   +K     G          ++
Sbjct: 223 M----ERGGCL-PNLTTYLSILNASAITSTGAL-EWVKEVHKHAGKAGFISDLRVGNALI 276

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI----HQNVEIGEIAAQNLFLLE 709
            +  + G ++DA  + + M        +W++++G        H+   I     Q  F+  
Sbjct: 277 HMYAKCGSIDDARLVFDGMCDR--DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV-- 332

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG-----------VRKEPGCSWIEFGDE 758
           PD ++ Y+ L N + S   W+   +V K   E+G           V     C  I+    
Sbjct: 333 PD-STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQL 391

Query: 759 IHKFLA-----------GDGSHQQ--SEQLHGFLENLSERMRKEGYVPDTSCVLH----N 801
           I   LA           G  + Q+   E L  FL+     MR+EG+ PD +  ++    N
Sbjct: 392 IFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQ-----MRREGFFPDATTFVNILSAN 446

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           V EE  E +   HS   AI  G+++   G  +
Sbjct: 447 VGEEALEWVKEVHS--YAIDAGLVDLRVGNAL 476


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  617 bits (1591), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 327/840 (38%), Positives = 505/840 (60%), Gaps = 58/840 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++     A++++ EM    ++ + F F +VLKA + ++DL +GKQ+H  V
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+    V VANTLV MY KC  +  D  ++FD I E++ VSWN++ +   +      
Sbjct: 184 VVSGFE-GDVFVANTLVVMYAKC-DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M+ S ++P+ F+L S+  AC+ L  RD  R G+ +HG  +++G +W+ F  NA
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGL--RDSSR-GKIIHGYLIKLGYDWDPFSANA 298

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK+G + DA ++F+  +  D+VSWN +++    ++   +A+  L QM        
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------- 351

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
                               +++H+  ++ D+  D  FV   LVDMY  C  +E  R  F
Sbjct: 352 --------------------RQLHSSLMKMDMESD-LFVSVGLVDMYSKCDLLEDARMAF 390

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +K +  WNA+I+GY Q   D EAL LF++M +  G+  N TT+S+++ +    +  
Sbjct: 391 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-EGIGFNQTTLSTILKSTAGLQVV 449

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +HG ++K G   D YV N+L+D Y +   +E ++ IF++  + D VS+ +MIT Y
Sbjct: 450 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 509

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              GQ  +AL L  EMQ+ME                  KP+     ++L  C  LSA  +
Sbjct: 510 AQYGQGEEALKLFLEMQDME-----------------LKPDRFVCSSLLNACANLSAFEQ 552

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK++H + ++     D+  G++LV+MYAKCG ++ A R F  +  R +++W+ +I     
Sbjct: 553 GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQ 612

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G++ L+L   M+ EG     V PN +T +++  AC+H+G+V+E    F  M++ +G 
Sbjct: 613 HGHGRQALQLFNQMLKEG-----VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 667

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYAC++DLLGRAGK+ +A +L+N MP E + A  W +LLGA RIH++VE+G  AA
Sbjct: 668 KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN-ASVWGALLGAARIHKDVELGRRAA 726

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + LF+LEP+ +  +VLL+NIY+SA  W+   +VR+ M++  V+KEPG SWIE  D+++ F
Sbjct: 727 EMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTF 786

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD SH +S++++  L+ LS+ M K GYVP     LH+V + EKE LL  HSEKLA+AF
Sbjct: 787 LVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 846

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G++ TP G  IRV KNLRVC DCH A K+I KI SREII+RD+ RFHHFK+G+CSCGDYW
Sbjct: 847 GLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 195/674 (28%), Positives = 322/674 (47%), Gaps = 76/674 (11%)

Query: 57  QFRE-----AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           QF E     AIL+ I+  + +  P + ++  +L      + L  G QIHAH+ K G    
Sbjct: 33  QFSEDPQTTAILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLS-D 89

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
             ++ N L+N+Y KC    +   K+ D  +E D VSW+++I+   + G    AL AF  M
Sbjct: 90  DPSIRNHLINLYSKCRXFGY-ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM 148

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
               V+ + FT  SV  ACS +     LR+G+QVHG  +  G E + F+ N L+ MYAK 
Sbjct: 149 HLLGVKCNEFTFSSVLKACSIVK---DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
               D+K LF    +R++VSWN + S   Q D   EAV    +M L GIKP+  S++S++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC+ L     GK IH Y ++     D  F  +ALVDMY    ++     VF+ I    I
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWD-PFSANALVDMYAKVGDLADAISVFEKIKQPDI 324

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNA+I G   +E+ E+AL L  +M                            K  +H 
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQM----------------------------KRQLHS 356

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K+ +  D +V   L+DMYS+   +E ++  F+ +  +D ++WN +I+GY+   +  +
Sbjct: 357 SLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDME 416

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L  EM                E +     N  TL T+L     L  +   +++H  +
Sbjct: 417 ALSLFVEMHK--------------EGI---GFNQTTLSTILKSTAGLQVVHVCRQVHGLS 459

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           +++   +D+ V ++L+D Y KC  +  A R+F+   + +++++  +I AY  +G+G+E L
Sbjct: 460 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 519

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           +L   M     +  E+KP+     +L  AC++     +G  L   +   YG         
Sbjct: 520 KLFLEM-----QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGN 573

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAG--AWSSLLGACRIHQNVEIGEIAAQ--NLF 706
            +V++  + G ++DA +  +    E  + G  +WS+++G    H +   G  A Q  N  
Sbjct: 574 SLVNMYAKCGSIDDAGRAFS----ELTERGIVSWSAMIGGLAQHGH---GRQALQLFNQM 626

Query: 707 LLEPDVASHYVLLS 720
           L E    +H  L+S
Sbjct: 627 LKEGVSPNHITLVS 640


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 338/844 (40%), Positives = 492/844 (58%), Gaps = 31/844 (3%)

Query: 40   RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
            R   SW   +    +     EA+    EM +  +         +L +      L  G++I
Sbjct: 207  RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 100  HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
            H   +K    L  V VAN ++NMY KCGS + +  +VFD++  K  VSW  +I      G
Sbjct: 267  HVEAMKARL-LFDVNVANCILNMYAKCGS-IHEAREVFDKMETKSVVSWTIIIGGYADCG 324

Query: 160  KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
              ++A E F+ M    V P+  T ++V  A S  +    L+ G+ VH + L  G E +  
Sbjct: 325  HSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA---ALKWGKTVHSHILNAGHESDLA 381

Query: 219  IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +  AL+ MYAK G   D + +F+   +RDL++WNT++  L++   + EA     QM   G
Sbjct: 382  VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG 441

Query: 279  IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            + P+ ++   +L AC +   L  G+EIH+  +++  + D S V +AL+ MY  C  ++  
Sbjct: 442  MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS-VQNALISMYARCGSIKDA 500

Query: 339  RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R +F+ +  K I  W AMI G  ++    EAL +F  M++ AGL PN  T +S++ AC  
Sbjct: 501  RLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ-AGLKPNRVTYTSILNACSS 559

Query: 399  SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
              A      IH   I+ GL  D +V N L++MYS  G ++ ++ +FD M  RD V++N M
Sbjct: 560  PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAM 619

Query: 459  ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
            I GY       +AL L   +Q   EE                KP+ +T + +L  C    
Sbjct: 620  IGGYAAHNLGKEALKLFDRLQ---EEG--------------LKPDKVTYINMLNACANSG 662

Query: 519  ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            +L   KEIH+  +++   +D  +G+ALV  YAKCG  + A  VFD M  RNVI+WN II 
Sbjct: 663  SLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIG 722

Query: 579  AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
                HG GQ+VL+L + M  EG     +KP+ VTF++L +ACSH+G++ EG   F  M  
Sbjct: 723  GCAQHGRGQDVLQLFERMKMEG-----IKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSR 777

Query: 639  DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            D+GI P+ +HY C+VDLLGRAG++++   LI  MP + +    W +LLGACRIH NV + 
Sbjct: 778  DFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTR-IWGALLGACRIHGNVPVA 836

Query: 699  EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
            E AA++   L+PD A+ YV LS++Y++A +WD A  +RK M++ GV KEPG SWIE GD+
Sbjct: 837  ERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDK 896

Query: 759  IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
            +H F+A D SH +SE+++  L+ L+  M+ EGYVPDT  V+H+V+E EKE  +C HSE+L
Sbjct: 897  LHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERL 956

Query: 819  AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
            AIA+G+++T PGT IR+ KNLRVC DCH ATKFI+KI  REI+ RDV RFHHFK+G CSC
Sbjct: 957  AIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSC 1016

Query: 879  GDYW 882
            GDYW
Sbjct: 1017 GDYW 1020



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 189/648 (29%), Positives = 328/648 (50%), Gaps = 41/648 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +LK    ++DL  G+++H H++++   L   TV N L+NMY +CGS + +  +V+++
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV-NALINMYIQCGS-IEEARQVWNK 201

Query: 140 I--TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           +  TE+   SWN+M+    ++G  + AL+  R M    +     T + +  +C + S   
Sbjct: 202 LNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPS--- 258

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L  GR++H  +++    ++  + N ++ MYAK G + +A+ +F   E + +VSW  I+ 
Sbjct: 259 ALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             +       A    ++M   G+ P+ ++  +VL A S    L  GK +H++ L      
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHES 378

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D + VG+ALV MY  C   +  R+VF+ + ++ +  WN MI G  +    EEA  ++ +M
Sbjct: 379 DLA-VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM 437

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           +   G+ PN  T   ++ ACV   A      IH   +K G   D  VQNAL+ MY+R G 
Sbjct: 438 QR-EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGS 496

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           I+ ++ +F+ M  +D +SW  MI G    G   +AL + ++MQ                 
Sbjct: 497 IKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG-------------- 542

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               KPN +T  ++L  C + +AL  G+ IH   I   LATD  V + LV+MY+ CG + 
Sbjct: 543 ---LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVK 599

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            AR+VFD M  R+++ +N +I  Y  H  G+E L+L   +  EG     +KP++VT+I +
Sbjct: 600 DARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG-----LKPDKVTYINM 654

Query: 617 FAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
             AC++SG +    ++    +KD Y  + S  +   +V    + G   DA  + + M   
Sbjct: 655 LNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKMMKR 712

Query: 676 FDKAGAWSSLLGACRIH---QNVEIGEIAAQNLFLLEPDVASHYVLLS 720
                +W++++G C  H   Q+V +       +  ++PD+ +   LLS
Sbjct: 713 --NVISWNAIIGGCAQHGRGQDV-LQLFERMKMEGIKPDIVTFVSLLS 757



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/615 (28%), Positives = 295/615 (47%), Gaps = 40/615 (6%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +T+   SW   +   A       A   + +M +  + P+   +  VL A +G   L  GK
Sbjct: 306 ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGK 365

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H+H++  G+  S + V   LV MY KCGS   D  +VF+++  +D ++WN+MI  L  
Sbjct: 366 TVHSHILNAGHE-SDLAVGTALVKMYAKCGS-YKDCRQVFEKLVNRDLIAWNTMIGGLAE 423

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G W+ A E +  M    + P+  T V +  AC N +    L  GR++H   ++ G  ++
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPT---ALHWGREIHSRVVKDGFMFD 480

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + NAL++MYA+ G + DA+ LF     +D++SW  ++  L+++    EA+   + M  
Sbjct: 481 ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ 540

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+KP+ V+  S+L ACS    LD G+ IH   +   +  D + V + LV+MY  C  V+
Sbjct: 541 AGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD-AHVANTLVNMYSMCGSVK 599

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R+VFD ++ + I  +NAMI GY  +   +EAL LF +++E  GL P+  T  +++ AC
Sbjct: 600 DARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE-EGLKPDKVTYINMLNAC 658

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             S +    + IH   +K G   D  + NAL+  Y++ G    +  +FD M  R+ +SWN
Sbjct: 659 ANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWN 718

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            +I G   C QHG    +L+  + M+ E                KP+ +T +++L  C  
Sbjct: 719 AIIGG---CAQHGRGQDVLQLFERMKMEG--------------IKPDIVTFVSLLSACSH 761

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
              L +G+       R+   T  +     +VD+  + G L+    +   MP + N   W 
Sbjct: 762 AGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWG 821

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK---PNEVTFIALFAACSHSGMVSEGMD 631
            ++ A  +HG            VAE +    +K    N   ++AL    + +GM      
Sbjct: 822 ALLGACRIHGNVP---------VAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAK 872

Query: 632 LFYKMKDDYGIEPSP 646
           L  K+ +  G+   P
Sbjct: 873 L-RKLMEQRGVTKEP 886



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 264/543 (48%), Gaps = 41/543 (7%)

Query: 199 LRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE--DRDLVSWNTIV 255
           L  GR+VH + ++     + + +NAL+ MY + G +++A+ ++      +R + SWN +V
Sbjct: 157 LVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMV 216

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
               Q     EA+  LR+M   G+     +   +L +C     L+ G+EIH  A++  +L
Sbjct: 217 VGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLL 276

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D + V + +++MY  C  +   R VFD +  K +  W  +I GY    + E A  +F K
Sbjct: 277 FDVN-VANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQK 335

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M++  G+ PN  T  +V+ A     A    + +H H +  G   D  V  AL+ MY++ G
Sbjct: 336 MQQ-EGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
             +  + +F+ +  RD ++WNTMI G    G   +A  +  +MQ               E
Sbjct: 395 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR--------------E 440

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
            ++   PN IT + +L  C   +AL  G+EIH+  +++    D+ V +AL+ MYA+CG +
Sbjct: 441 GMM---PNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSI 497

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             AR +F+ M  +++I+W  +I      G G E L + ++M   G     +KPN VT+ +
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG-----LKPNRVTYTS 552

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  ACS    +  G  + ++   + G+         +V++    G V+DA Q+ + M   
Sbjct: 553 ILNACSSPAALDWGRRI-HQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLF------LLEPDVASHYVLLSNIYSSAQL- 728
                A+++++G    H    +G+  A  LF       L+PD  ++  +L+   +S  L 
Sbjct: 612 --DIVAYNAMIGGYAAHN---LGK-EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 665

Query: 729 WDK 731
           W K
Sbjct: 666 WAK 668



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 27/320 (8%)

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           M  ++  +  G   N+     ++  C+  +       +H H I+     D+Y  NAL++M
Sbjct: 126 MDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINM 185

Query: 431 YSRMGRIEISKTIFDDME--VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           Y + G IE ++ +++ +    R   SWN M+ GY   G   +AL LLREMQ       R 
Sbjct: 186 YIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR- 244

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                            T M +L  C + SAL  G+EIH  A++  L  DV V + +++M
Sbjct: 245 ----------------ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNM 288

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKCG ++ AR VFD M  ++V++W +II  Y   G  +   E+ + M  EG     V P
Sbjct: 289 YAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG-----VVP 343

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N +T+I +  A S    +  G  +   + +  G E        +V +  + G  +D  Q+
Sbjct: 344 NRITYINVLNAFSGPAALKWGKTVHSHILNA-GHESDLAVGTALVKMYAKCGSYKDCRQV 402

Query: 669 INMMPPEFDKAGAWSSLLGA 688
              +        AW++++G 
Sbjct: 403 FEKLVNR--DLIAWNTMIGG 420


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/841 (37%), Positives = 492/841 (58%), Gaps = 34/841 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   +   ++S    EA+  +  M    ++P + +   +   +  + ++ L + IH +V
Sbjct: 197  AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +  +   S  V+N L+++Y KCG D+    +VFD++ ++D VSW +M+A     G +  
Sbjct: 257  FRRDF---SSAVSNGLIDLYSKCG-DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             LE F  M   NV  +  + VS  LA +       L  G+++HG +L+   + +  +   
Sbjct: 313  VLELFDKMKLGNVRINKVSAVSAFLAAAETI---DLEKGKEIHGCALQQRIDSDILVATP 369

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            LM MYAK G  + AK LF   + RDLV+W+ I+++L Q     EA+   ++M  + +KP+
Sbjct: 370  LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             V++ S+LPAC+ L +L  GK IH + ++ D+  D S  G+ALV MY  C         F
Sbjct: 430  RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS-TGTALVSMYAKCGFFTAALTTF 488

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            + +S + I  WN++I GY Q      A+ +F K+  ++ + P+A TM  VVPAC      
Sbjct: 489  NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR-LSAINPDAGTMVGVVPACALLNDL 547

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITG 461
                 IHG  +KLG   D +V+NAL+DMY++ G +  ++ +F+  +  +D V+WN +I  
Sbjct: 548  DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            Y    Q+G A   +     M  E                 PNS+T ++VLP    L+A  
Sbjct: 608  YM---QNGHAKEAISSFHQMRLENFH--------------PNSVTFVSVLPAAAYLAAFR 650

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            +G   HA  I+    ++ +VG++L+DMYAKCG L+++ ++F+ M  ++ ++WN ++  Y 
Sbjct: 651  EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 710

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +HG G   + L   M     +  +V+ + V+F+++ +AC H+G+V EG  +F+ M D Y 
Sbjct: 711  VHGHGDRAIALFSLM-----QESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYH 765

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            I+P  +HYAC+VDLLGRAG  ++    I +MP E D AG W +LLG+CR+H NV++GE+A
Sbjct: 766  IKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD-AGVWGALLGSCRMHSNVKLGEVA 824

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
              +L  LEP   +H+V+LS+IY+ +  W  A   R KM ++G++K PGCSW+E  +++H 
Sbjct: 825  LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
            F  GD SH Q E +H     L E+M K GYVPD SCVL NV EE+KE  L  HSE+LAI 
Sbjct: 885  FRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 944

Query: 822  FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            F +LNTPPG+TI++ KNLRVC DCH  TKFISKI +R II+RD  RFHHF++G CSC DY
Sbjct: 945  FALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDY 1004

Query: 882  W 882
            W
Sbjct: 1005 W 1005



 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 197/649 (30%), Positives = 324/649 (49%), Gaps = 34/649 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+  RS Q+ EA+  Y  M    ++PD + F  VLKA  G  +L  G   H  + 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G     V +   LV+MY K G D+    +VFD++ ++D V+WN+MIA L +      A
Sbjct: 157 RRGLE-RDVFIGAGLVDMYSKMG-DLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           ++ FR M    VEPSS +L+++      LS    + L R +HG   R  ++++ + N L+
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLS---NIELCRSIHGYVFR-RDFSSAVSNGLI 270

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            +Y+K G VD A+ +F    D+D VSW T+++  + N  F+E +    +M L  ++ + V
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           S  S   A +    L+ GKEIH  AL+  I  D   V + L+ MY  C E E  +++F  
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD-ILVATPLMVMYAKCGETEKAKQLFWG 389

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  W+A+I    Q  Y EEAL LF +M+    + PN  T+ S++PAC        
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-QKMKPNRVTLMSILPACADLSLLKL 448

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + IH   +K  +  D     AL+ MY++ G    + T F+ M  RD V+WN++I GY  
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G   +A+ +                Y L  + +   P++ T++ V+P C  L+ L +G 
Sbjct: 509 IGDPYNAIDMF---------------YKLRLSAI--NPDAGTMVGVVPACALLNDLDQGT 551

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMH 583
            IH   ++    +D  V +AL+DMYAKCG L  A  +F+     ++ +TWNVII AY  +
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G  +E +     M  E        PN VTF+++  A ++     EGM  F+      G  
Sbjct: 612 GHAKEAISSFHQMRLE-----NFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFL 665

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +      ++D+  + G+++ + +L N M  +     +W+++L    +H
Sbjct: 666 SNTLVGNSLIDMYAKCGQLDYSEKLFNEM--DHKDTVSWNAMLSGYAVH 712



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 182/611 (29%), Positives = 295/611 (48%), Gaps = 40/611 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +P +L +   +  L    QIHA ++  G+    S+T    L +++ KC  D+     VFD
Sbjct: 35  YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKC--DL--ARSVFD 87

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
                 ++ WNSMI    R  +++ ALE +  M+   +EP  +T   V  AC+       
Sbjct: 88  STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL---N 144

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L+ G   HG   R G E + FI   L+ MY+K+G +  A+ +F     RD+V+WN +++ 
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG 204

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           LSQ++   EAV F R M L G++P  VS+ ++ P    L  ++  + IH Y  R D    
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--- 261

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           +S V + L+D+Y  C +V+  RRVFD + D+    W  M+ GY  N    E L LF KM 
Sbjct: 262 SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM- 320

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           ++  +  N  +  S   A   +      + IHG A++  +  D  V   LM MY++ G  
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E +K +F  ++ RD V+W+ +I      G   +AL L +EMQN                 
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ---------------- 424

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
            + KPN +TLM++LP C  LS L  GK IH + ++  + +D+  G+ALV MYAKCG    
Sbjct: 425 -KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A   F+ M  R+++TWN +I  Y   G+    +++   +     R   + P+  T + + 
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-----RLSAINPDAGTMVGVV 538

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC+    + +G    + +    G E        ++D+  + G +  A  L N      D
Sbjct: 539 PACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597

Query: 678 KAGAWSSLLGA 688
           +   W+ ++ A
Sbjct: 598 EV-TWNVIIAA 607



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 243/513 (47%), Gaps = 31/513 (6%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q R   +W   + +  ++    EA+  + EM    ++P+     ++L A A +  L L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK IH   VK     S ++    LV+MY KCG         F+R++ +D V+WNS+I   
Sbjct: 449 GKSIHCFTVKADMD-SDLSTGTALVSMYAKCGF-FTAALTTFNRMSSRDIVTWNSLINGY 506

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            + G    A++ F  +  S + P + T+V V  AC+ L+  D    G  +HG  +++G E
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ---GTCIHGLIVKLGFE 563

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            +  + NAL+ MYAK G +  A+ LF K+   +D V+WN I+++  QN    EA+    Q
Sbjct: 564 SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ 623

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L    P+ V+  SVLPA ++L     G   HA  ++   L  N+ VG++L+DMY  C 
Sbjct: 624 MRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL-SNTLVGNSLIDMYAKCG 682

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           +++   ++F+ +  K    WNAM++GY  + + + A+ LF  M+E + +  ++ +  SV+
Sbjct: 683 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-SQVQIDSVSFVSVL 741

Query: 394 PACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-D 451
            AC  +    +   I H  + K  +  D      ++D+  R G  + +      M V  D
Sbjct: 742 SACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 801

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL-------------DETVL 498
              W  ++     C  H +  +    + ++ + + RN  + +             D    
Sbjct: 802 AGVWGALLGS---CRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           R K N + L    PGC   S +    ++HA+ +
Sbjct: 859 RSKMNDLGLKKT-PGC---SWVELKNKVHAFRV 887


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 338/856 (39%), Positives = 505/856 (58%), Gaps = 36/856 (4%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM---TRSDIQPDNFAFPAVLKAVA 88
           L   G  +R   SW   + +   S    EA+  Y  M     S + PD     +VLKA  
Sbjct: 116 LLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASG 175

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVS 147
              D   G ++H   VK+G   S+  VAN L+ MY KCG  +    +VF+ + + +D  S
Sbjct: 176 VEGDGRCGCEVHGLAVKHGLDRSTF-VANALIAMYAKCGI-LDSAMRVFELMHDGRDVAS 233

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WNSMI+   + G +  AL+ FR M  + +  +S+T V V   C+ L++   L LGR++H 
Sbjct: 234 WNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQ---LNLGRELHA 290

Query: 208 NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
             L+ G       NAL+ MY K GRVD A  +F+  +++D +SWN+++S   QN  + EA
Sbjct: 291 ALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEA 350

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           + F+ +M   G +PD   I S+  A  HL  L  GKE+HAYA++  +  D   VG+ L+D
Sbjct: 351 IEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQ-VGNTLMD 409

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  CR +E    VFD +  K    W  +IT Y Q+    EAL +F + ++  G+  +  
Sbjct: 410 MYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQK-EGIKVDPM 468

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            + S++ AC   E     + +H +AI+ GL  D  V+N ++D+Y   G +  S  +F+ +
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETV 527

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           E +D V+W +MI  Y   G   +AL+L  EMQ+ +                  +P+S+ L
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTD-----------------VQPDSVAL 570

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L   G LS+LAKGKE+H + IR     +  + S+LVDMY+ CG L+ A +VF+ +  
Sbjct: 571 VSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKC 630

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++++ W  +I A GMHG G++ ++L K M+  G     V P+ V+F+AL  ACSHS +V+
Sbjct: 631 KDMVLWTAMINATGMHGHGKQAIDLFKRMLQTG-----VTPDHVSFLALLYACSHSKLVN 685

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           EG      M   Y +EP  +HYACVVDLLGR+G+ E+AY+ I  MP +  K+  W SLLG
Sbjct: 686 EGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLK-PKSVVWCSLLG 744

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           ACR+H+N E+  +AA  L  LEPD   +YVL+SN+++    W+ A +VR ++ E G+RK+
Sbjct: 745 ACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKD 804

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEE 806
           P CSWIE G+ +H F   D SH+ +E+++  L  ++ER+RKEG Y  DT  VLH+V+EEE
Sbjct: 805 PACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEE 864

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           K  +L  HSE+LAI+FG++NT PG  +R+AKNLRVC DCH+ TK +SK+  R+I++RD  
Sbjct: 865 KVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDAN 924

Query: 867 RFHHFKNGTCSCGDYW 882
           RFHHF  G+CSCGD+W
Sbjct: 925 RFHHFSGGSCSCGDFW 940



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 191/652 (29%), Positives = 321/652 (49%), Gaps = 42/652 (6%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           SL+   +    R+A+      T     P    +  VL  VA  + ++ G Q+HAH V  G
Sbjct: 30  SLKQLCKEGNLRQALRLLTSQTPGRSPPQEH-YGWVLDLVAAKKAVAQGVQVHAHAVATG 88

Query: 108 -YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
                   +A  L+ MYGKCG  + D   +FD ++ +   SWN++I      G    AL 
Sbjct: 89  SLEGDDGFLATKLLFMYGKCGR-VADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147

Query: 167 AFRMMLY---SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +R M     S V P   TL SV  A       DG R G +VHG +++ G + +TF+ NA
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASG--VEGDG-RCGCEVHGLAVKHGLDRSTFVANA 204

Query: 223 LMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           L+AMYAK G +D A  +F+   D RD+ SWN+++S   QN  FL+A+   R M    +  
Sbjct: 205 LIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSM 264

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +   VL  C+ L  L+ G+E+HA  L++   ++     +AL+ MY  C  V+   RV
Sbjct: 265 NSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN--IQCNALLVMYTKCGRVDSALRV 322

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  I +K    WN+M++ Y QN    EA+    +M    G  P+   + S+  A      
Sbjct: 323 FREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR-GGFQPDHACIVSLSSAVGHLGW 381

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             + + +H +AIK  L  D  V N LMDMY +   IE S  +FD M ++D +SW T+IT 
Sbjct: 382 LLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITC 441

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y    +H +AL + RE Q               E +   K + + + ++L  C  L  + 
Sbjct: 442 YAQSSRHIEALEIFREAQK--------------EGI---KVDPMMIGSILEACSGLETIL 484

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
             K++H YAIRN L  D+VV + ++D+Y +CG +  + ++F+ +  ++++TW  +I  Y 
Sbjct: 485 LAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYA 543

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDY 640
             G   E L L   M     +  +V+P+ V  +++  A      +++G ++  + ++ ++
Sbjct: 544 NSGLLNEALVLFAEM-----QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNF 598

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +E +    + +VD+    G +  A ++ N +  +      W++++ A  +H
Sbjct: 599 HMEEAI--VSSLVDMYSGCGSLSGALKVFNAV--KCKDMVLWTAMINATGMH 646


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 321/772 (41%), Positives = 472/772 (61%), Gaps = 45/772 (5%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+++ K GS + +  +VF+ I +K    +++M+    +    + AL     M Y +V+P
Sbjct: 87  LVSLFSKYGS-INEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVD 234
             +    +   C +      L+ G+++HG    NS      N F M  ++ MYAK  ++D
Sbjct: 146 VVYNFTYLLKVCGD---NADLKRGKEIHGQLITNSFAA---NVFAMTGVVNMYAKCRQID 199

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           DA  +F    +RDLVSWNTI++  SQN    +A+  + +M   G +PD +++ +VLPA +
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259

Query: 295 HLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            + +L  GK IH YA+R     L++   + +AL DMY  C  VE  R +FD +  K +  
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFAKLVN---ISTALADMYSKCGSVETARLIFDGMDQKTVVS 316

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN+M+ GY QN   E+A+ +F KM E  G+ P   T+   + AC         + +H   
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLGDLERGKFVHKFV 375

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            +L LG D  V N+L+ MYS+  R++I+  IF+++  R  VSWN MI GY   G+  +AL
Sbjct: 376 DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
               EM++                 L  KP+S T+++V+P    LS     K IH   IR
Sbjct: 436 NCFSEMKS-----------------LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           + L  ++ V +ALVDMY+KCG ++ AR++FD++  R+VITWN +I  YG HG G+  L+L
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M     + G V+PN++T++++ +ACSHSG+V EG+  F  MK DYG+EPS DHY  +
Sbjct: 539 FDKM-----KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593

Query: 653 VDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           VDLLGRAG++++A+  I  MP  P     GA   +LGAC+IH+N+E+GE AA+ LF L P
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGA---MLGACKIHKNIEVGEKAAKKLFELNP 650

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           D   ++VLL+NIY+S   W K  +VRK M++ G++K PGCS +E  +E+H F +G  +H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           QS++++ FLE L   ++  GYVPDT+ +L +V ++ +E LL  HSEKLAIAFG+LNT PG
Sbjct: 711 QSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPG 769

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TTI V KNLRVC DCH ATK+IS +  REII+RD++RFHHFKNG CSCGDYW
Sbjct: 770 TTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 265/531 (49%), Gaps = 36/531 (6%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+++    A+     M   D++P  + F  +LK      DL  GK+IH  ++   +
Sbjct: 119 LKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF 178

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             ++V     +VNMY KC   + D YK+FDR+ E+D VSWN++IA   + G    ALE  
Sbjct: 179 A-ANVFAMTGVVNMYAKC-RQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV 236

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMY 227
             M      P S TLV+V  A +++     L +G+ +HG ++R G      I  AL  MY
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGL---LMVGKSIHGYAIRAGFAKLVNISTALADMY 293

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           +K G V+ A+ +F   + + +VSWN+++    QN +  +A+    +M   GI P GV+I 
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 288 SVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
             L AC+ L  L+ GK +H +     L +DI + NS     L+ MY  C+ V+    +F+
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS-----LISMYSKCKRVDIASDIFN 408

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            ++ +    WNAMI GY QN    EAL  F +M+ + G+ P++ TM SV+PA        
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTR 467

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHG  I+  L ++ +V  AL+DMYS+ G I +++ +FD +  R  ++WN MI GY 
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G    AL L  +M+    E                 PN IT ++V+  C     + +G
Sbjct: 528 THGLGRAALDLFDKMKKGAVE-----------------PNDITYLSVISACSHSGLVDEG 570

Query: 524 KEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              H  +++     +  +    A+VD+  + G +  A    + MP+   IT
Sbjct: 571 LR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 221/415 (53%), Gaps = 13/415 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++   ++A+   + M     +PD+     VL A A +  L +GK IH + 
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+    V ++  L +MY KCGS +     +FD + +K  VSWNSM+    + G+ + 
Sbjct: 275 IRAGFA-KLVNISTALADMYSKCGS-VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMN 221
           A+  F  ML   ++P+  T++    AC++L     L  G+ VH   + L +G  +  +MN
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLG---DLERGKFVHKFVDQLNLGS-DISVMN 388

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L++MY+K  RVD A  +F +   R  VSWN ++   +QN +  EA+    +M   G+KP
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++ SV+PA + L +    K IH   +R+  L  N FV +ALVDMY  C  +   R++
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKL 507

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD ISD+ +  WNAMI GYG +     AL LF KM++ A + PN  T  SV+ AC  S  
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA-VEPNDITYLSVISACSHS-G 565

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             D+   H  ++K   G +  + +  A++D+  R GRI+ +    ++M +   ++
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 24/337 (7%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           L   G   +   SW   +    ++ +  +AI  + +M    I P        L A A + 
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC-----GSDMWDVYKVFDRITEKDQV 146
           DL  GK +H  V +   G S ++V N+L++MY KC      SD      +F+ +  +  V
Sbjct: 364 DLERGKFVHKFVDQLNLG-SDISVMNSLISMYSKCKRVDIASD------IFNNLNGRTHV 416

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SWN+MI    + G+   AL  F  M    ++P SFT+VSV  A + LS     R  + +H
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVT---RHAKWIH 473

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           G  +R   + N F+  AL+ MY+K G +  A+ LF    DR +++WN ++     +    
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SA 324
            A+    +M    ++P+ ++  SV+ ACSH  ++D G   H  +++ D  ++ S     A
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGA 592

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           +VD+      +   +  +DFI +  I+     IT YG
Sbjct: 593 MVDLLGRAGRI---KEAWDFIENMPIS---PGITVYG 623



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 27/275 (9%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK GL  +   Q  L+ ++S+ G I  +  +F+ ++ +    ++TM+ GY        AL
Sbjct: 73  IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
             L  M+           YD        KP       +L  CG  + L +GKEIH   I 
Sbjct: 133 AFLCRMR-----------YD------DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           N  A +V   + +V+MYAKC  ++ A ++FD MP R++++WN II  +  +G  ++ LEL
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC 651
           +  M  EG R     P+ +T + +  A +  G++  G  +  Y ++   G     +    
Sbjct: 236 VLRMQDEGQR-----PDSITLVTVLPAAADVGLLMVGKSIHGYAIRA--GFAKLVNISTA 288

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           + D+  + G VE A  + + M  +     +W+S++
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQK--TVVSWNSMM 321



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 8/220 (3%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +   A++ +  EA+  + EM    ++PD+F   +V+ A+A +      K I
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  +++      ++ V   LV+MY KCG+ +    K+FD I+++  ++WN+MI      G
Sbjct: 473 HGLIIRSCLD-KNIFVTTALVDMYSKCGA-IHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTF 218
               AL+ F  M    VEP+  T +SV  ACS+    D GLR     H  S++       
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-----HFKSMKQDYGLEP 585

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            M+   AM   LGR    K  +   E+  +    T+  ++
Sbjct: 586 SMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAM 625


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 326/852 (38%), Positives = 503/852 (59%), Gaps = 39/852 (4%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++ + +EAI     + +  +  ++  +  +++  A ++    GK +H  + + G  +  +
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID-I 113

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            + N+L+N Y K G D+  V +VF R+T +D V+W+SMIA          A + F  M  
Sbjct: 114 YLGNSLINFYSKFG-DVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR 232
           +N+EP+  T +S+  AC+N S    L   R++H      G E +  +  AL+ MY+K G 
Sbjct: 173 ANIEPNRITFLSILKACNNYSM---LEKAREIHTVVKASGMETDVAVATALITMYSKCGE 229

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +  A  +F+  ++R++VSW  I+ + +Q+ K  EA     +M   GI P+ V+  S+L +
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289

Query: 293 CSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           C+  E L+ G+ IH++     L  D+++ N     AL+ MYC C  ++  R  FD +S +
Sbjct: 290 CNTPEALNRGRRIHSHISERGLETDVVVAN-----ALITMYCKCNCIQDARETFDRMSKR 344

Query: 349 KIALWNAMITGYGQNEY-DEEAL-MLFIKMEEV--AGLWPNATTMSSVVPACVRSEAFPD 404
            +  W+AMI GY Q+ Y D+E+L  +F  +E +   G++PN  T  S++ AC    A   
Sbjct: 345 DVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ 404

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              IH    K+G   DR +Q A+ +MY++ G I  ++ +F  ME ++ V+W +++T Y  
Sbjct: 405 GRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK 464

Query: 465 CGQHGDALMLLREMQNME------------EEKNRNNVYDLDET--VLRPKPNSITLMTV 510
           CG    A  +  EM                +  +   V++L  +  V   +P+ +T++++
Sbjct: 465 CGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISI 524

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  CGALSAL +GK +HA A++  L +D VV ++L+ MY+KCG +  AR VFD +  R+ 
Sbjct: 525 LEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDT 584

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN ++  YG HG G E ++L K M+ E      V PNE+TF A+ +AC  +G+V EG 
Sbjct: 585 VAWNAMLAGYGQHGIGPEAVDLFKRMLKE-----RVPPNEITFTAVISACGRAGLVQEGR 639

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
           ++F  M++D+ ++P   HY C+VDLLGRAG++++A + I  MP E D    W +LLGAC+
Sbjct: 640 EIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPD-ISVWHALLGACK 698

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
            H NV++ E AA ++  LEP  AS YV LSNIY+ A  WD +  VRK M + G++K+ G 
Sbjct: 699 SHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGE 758

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S IE    IH F+A D +H + + +H  LE L++ M++ GY PD   VLH+V+E +KE  
Sbjct: 759 SSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERA 818

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           LC HSEKLAIA+G+L TPPGT IR+ KNLRVC DCH ATKFISKI  REI+ RD  RFH+
Sbjct: 819 LCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHY 878

Query: 871 FKNGTCSCGDYW 882
           FKNGTCSCGD+W
Sbjct: 879 FKNGTCSCGDFW 890



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/585 (27%), Positives = 274/585 (46%), Gaps = 67/585 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + A +N   +A  ++  M  ++I+P+   F ++LKA      L   ++IH  V
Sbjct: 146 TWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT-V 204

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK     + V VA  L+ MY KCG ++    ++F ++ E++ VSW ++I    +  K + 
Sbjct: 205 VKASGMETDVAVATALITMYSKCG-EISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNA 222
           A E +  ML + + P++ T VS+  +C+     + L  GR++H + S R  E +  + NA
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNT---PEALNRGRRIHSHISERGLETDVVVANA 320

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN-----DKFLEAVMFLRQMALR 277
           L+ MY K   + DA+  F     RD++SW+ +++  +Q+     +   E    L +M   
Sbjct: 321 LITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRRE 380

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHA----------YALRNDILIDNSFVGS---- 323
           G+ P+ V+  S+L ACS    L+ G++IHA           +L+  I    +  GS    
Sbjct: 381 GVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEA 440

Query: 324 ----------------ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
                           +L+ MY  C ++    +VF  +S + +  WN MI GY Q+    
Sbjct: 441 EQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIA 500

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           +   L   M +V G  P+  T+ S++ AC    A    + +H  A+KLGL  D  V  +L
Sbjct: 501 KVFELLSSM-KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSL 559

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG---DALMLLREMQNMEEE 484
           + MYS+ G +  ++T+FD +  RDTV+WN M+ GY   GQHG   +A+ L + M      
Sbjct: 560 IGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGY---GQHGIGPEAVDLFKRM------ 610

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGS 543
                   L E   R  PN IT   V+  CG    + +G+EI      +  +        
Sbjct: 611 --------LKE---RVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYG 659

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
            +VD+  + G L  A      MP   ++  W+ ++ A   H   Q
Sbjct: 660 CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQ 704



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 209/436 (47%), Gaps = 36/436 (8%)

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L +  +  EA+  L  +  RG+  +  +   ++  C+ L   + GK +H       + ID
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             ++G++L++ Y    +V    +VF  ++ + +  W++MI  Y  N +  +A   F +M+
Sbjct: 113 -IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           + A + PN  T  S++ AC           IH      G+  D  V  AL+ MYS+ G I
Sbjct: 172 D-ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEI 230

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            ++  IF  M+ R+ VSW  +I                   Q   + +  N  ++L E +
Sbjct: 231 SLACEIFQKMKERNVVSWTAII-------------------QANAQHRKLNEAFELYEKM 271

Query: 498 LRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           L+    PN++T +++L  C    AL +G+ IH++     L TDVVV +AL+ MY KC C+
Sbjct: 272 LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCI 331

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEG-----QEVLELLKNMVAEGSRGGEVKPNE 610
             AR  FD M  R+VI+W+ +I  Y   G        EV +LL+ M  EG     V PN+
Sbjct: 332 QDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREG-----VFPNK 386

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTF+++  ACS  G + +G  +  ++    G E        + ++  + G + +A Q+ +
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEI-SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFS 445

Query: 671 MMPPEFDKAGAWSSLL 686
            M  E     AW+SLL
Sbjct: 446 KM--ENKNVVAWASLL 459



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 16/231 (6%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   SW   +   A+S    +       M     QPD     ++L+A   +  L  GK 
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKL 539

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HA  VK G   S   VA +L+ MY KCG ++ +   VFD+I+ +D V+WN+M+A   + 
Sbjct: 540 VHAEAVKLGLE-SDTVVATSLIGMYSKCG-EVTEARTVFDKISNRDTVAWNAMLAGYGQH 597

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL-RLGRQV-----HGNSLRV 212
           G    A++ F+ ML   V P+  T  +V  AC     R GL + GR++         ++ 
Sbjct: 598 GIGPEAVDLFKRMLKERVPPNEITFTAVISACG----RAGLVQEGREIFRIMQEDFRMKP 653

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQND 262
           G+ +   M  L+    + GR+ +A+   +    + D+  W+ ++ +   +D
Sbjct: 654 GKQHYGCMVDLL---GRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHD 701


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/841 (37%), Positives = 490/841 (58%), Gaps = 34/841 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   +   ++S    EA+  +  M    ++P + +   +   +  + ++ L + IH +V
Sbjct: 197  AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +  +   S  V+N L+++Y KCG D+    +VFD++ ++D VSW +M+A     G +  
Sbjct: 257  FRRDF---SSAVSNGLIDLYSKCG-DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             LE F  M   NV  +  + VS  LA +       L  G+++HG +L+   + +  +   
Sbjct: 313  VLELFDKMKLGNVRINKVSAVSAFLAAAETI---DLEKGKEIHGCALQQRIDSDILVATP 369

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            LM MYAK G  + AK LF   + RDLV+W+ I+++L Q     EA+   ++M  + +KP+
Sbjct: 370  LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             V++ S+LPAC+ L +L  GK IH + ++ D+  D S  G+ALV MY  C         F
Sbjct: 430  RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS-TGTALVSMYAKCGFFTAALTTF 488

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            + +S + I  WN++I GY Q      A+ +F K+  ++ + P+A TM  VVPAC      
Sbjct: 489  NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR-LSAINPDAGTMVGVVPACALLNDL 547

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITG 461
                 IHG  +KLG   D +V+NAL+DMY++ G +  ++ +F+  +  +D V+WN +I  
Sbjct: 548  DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            Y    Q+G A   +     M  E                 PNS+T ++VLP    L+A  
Sbjct: 608  YM---QNGHAKEAISSFHQMRLENFH--------------PNSVTFVSVLPAAAYLAAFR 650

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            +G   HA  I+    ++ +VG++L+DMYAKCG L ++ ++F+ M  ++ ++WN ++  Y 
Sbjct: 651  EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYA 710

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +HG G   + L   M     +  +V+ + V+F+++ +AC H G+V EG  +F+ M D Y 
Sbjct: 711  VHGHGDRAIALFSLM-----QESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYH 765

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            I+P  +HYAC+VDLLGRAG  ++    I +MP E D AG W +LLG+CR+H NV++GE+A
Sbjct: 766  IKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD-AGVWGALLGSCRMHSNVKLGEVA 824

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
              +L  LEP   +H+V+LS+IY+ +  W  A   R KM ++G++K PGCSW+E  +++H 
Sbjct: 825  LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
            F  GD SH Q E +H     L E+M K GYVPD SCVL NV EE+KE  L  HSE+LAI 
Sbjct: 885  FRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 944

Query: 822  FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            F +LNTPPG+TI++ KNLRVC DCH  TKFISKI +R II+RD  RFHHF++G CSC DY
Sbjct: 945  FALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDY 1004

Query: 882  W 882
            W
Sbjct: 1005 W 1005



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 197/649 (30%), Positives = 323/649 (49%), Gaps = 34/649 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+  RS Q+ EA+  Y  M    ++PD + F  VLKA  G  +L  G   H  + 
Sbjct: 97  WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEID 156

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G     V +   LV+MY K G D+    +VFD++ ++D V+WN+MIA L +      A
Sbjct: 157 RRGLE-RDVFIGAGLVDMYSKMG-DLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           ++ FR M    VEPSS +L+++      LS    + L R +HG   R  ++++ + N L+
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLS---NIELCRSIHGYVFR-RDFSSAVSNGLI 270

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            +Y+K G VD A+ +F    D+D VSW T+++  + N  F+E +    +M L  ++ + V
Sbjct: 271 DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           S  S   A +    L+ GKEIH  AL+  I  D   V + L+ MY  C E E  +++F  
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD-ILVATPLMVMYAKCGETEKAKQLFWG 389

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  W+A+I    Q  Y EEAL LF +M+    + PN  T+ S++PAC        
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN-QKMKPNRVTLMSILPACADLSLLKL 448

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + IH   +K  +  D     AL+ MY++ G    + T F+ M  RD V+WN++I GY  
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G   +A+ +                Y L  + +   P++ T++ V+P C  L+ L +G 
Sbjct: 509 IGDPYNAIDMF---------------YKLRLSAI--NPDAGTMVGVVPACALLNDLDQGT 551

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMH 583
            IH   ++    +D  V +AL+DMYAKCG L  A  +F+     ++ +TWNVII AY  +
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G  +E +     M  E        PN VTF+++  A ++     EGM  F+      G  
Sbjct: 612 GHAKEAISSFHQMRLE-----NFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFL 665

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +      ++D+  + G++  + +L N M  +     +W+++L    +H
Sbjct: 666 SNTLVGNSLIDMYAKCGQLXYSEKLFNEM--DHKDTVSWNAMLSGYAVH 712



 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 182/611 (29%), Positives = 295/611 (48%), Gaps = 40/611 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +P +L +   +  L    QIHA ++  G+    S+T    L +++ KC  D+     VFD
Sbjct: 35  YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKC--DL--ARSVFD 87

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
                 ++ WNSMI    R  +++ ALE +  M+   +EP  +T   V  AC+       
Sbjct: 88  STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGAL---N 144

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L+ G   HG   R G E + FI   L+ MY+K+G +  A+ +F     RD+V+WN +++ 
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG 204

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           LSQ++   EAV F R M L G++P  VS+ ++ P    L  ++  + IH Y  R D    
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--- 261

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           +S V + L+D+Y  C +V+  RRVFD + D+    W  M+ GY  N    E L LF KM 
Sbjct: 262 SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM- 320

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           ++  +  N  +  S   A   +      + IHG A++  +  D  V   LM MY++ G  
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E +K +F  ++ RD V+W+ +I      G   +AL L +EMQN                 
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ---------------- 424

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
            + KPN +TLM++LP C  LS L  GK IH + ++  + +D+  G+ALV MYAKCG    
Sbjct: 425 -KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A   F+ M  R+++TWN +I  Y   G+    +++   +     R   + P+  T + + 
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-----RLSAINPDAGTMVGVV 538

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC+    + +G    + +    G E        ++D+  + G +  A  L N      D
Sbjct: 539 PACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597

Query: 678 KAGAWSSLLGA 688
           +   W+ ++ A
Sbjct: 598 EV-TWNVIIAA 607



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 241/513 (46%), Gaps = 31/513 (6%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q R   +W   + +  ++    EA+  + EM    ++P+     ++L A A +  L L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK IH   VK     S ++    LV+MY KCG         F+R++ +D V+WNS+I   
Sbjct: 449 GKSIHCFTVKADMD-SDLSTGTALVSMYAKCGF-FTAALTTFNRMSSRDIVTWNSLINGY 506

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            + G    A++ F  +  S + P + T+V V  AC+ L+  D    G  +HG  +++G E
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ---GTCIHGLIVKLGFE 563

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            +  + NAL+ MYAK G +  A+ LF K+   +D V+WN I+++  QN    EA+    Q
Sbjct: 564 SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ 623

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L    P+ V+  SVLPA ++L     G   HA  ++   L  N+ VG++L+DMY  C 
Sbjct: 624 MRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL-SNTLVGNSLIDMYAKCG 682

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           ++    ++F+ +  K    WNAM++GY  + + + A+ LF  M+E + +  ++ +  SV+
Sbjct: 683 QLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-SQVQIDSVSFVSVL 741

Query: 394 PACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-D 451
            AC       +   I H  + K  +  D      ++D+  R G  + +      M V  D
Sbjct: 742 SACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 801

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL-------------DETVL 498
              W  ++     C  H +  +    + ++ + + RN  + +             D    
Sbjct: 802 AGVWGALLGS---CRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           R K N + L    PGC   S +    ++HA+ +
Sbjct: 859 RSKMNDLGLKKT-PGC---SWVELKNKVHAFRV 887


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 334/824 (40%), Positives = 481/824 (58%), Gaps = 37/824 (4%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +L Y+    S  Q D++ +  +L++    +DL++GKQ+H H++++G    +V + NTL+ 
Sbjct: 31  VLQYLHQKGS--QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMK-PNVYIINTLLK 87

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           +Y  CGS + +  ++FD+ + K  VSWN MI+     G    A   F +M    +EP  F
Sbjct: 88  LYVHCGS-VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKF 146

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T VS+  ACS+ +    L  GR+VH   +  G   N  + NAL++MYAK G V DA+ +F
Sbjct: 147 TFVSILSACSSPA---ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
            +   RD VSW T+  + +++    E++     M   G++P  ++  +VL AC  L  L+
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            GK+IHA  + ++   D   V +AL  MY  C  V+  R VF+ + ++ +  WN MI G 
Sbjct: 264 KGKQIHAQIVESEHHSDVR-VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGL 322

Query: 361 GQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
             +   EEA  +F +M  E VA   P+  T  +++ AC R       + IH  A+K GL 
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVA---PDRVTYLAILSACARPGGLACGKEIHARAVKDGLV 379

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D    NAL++MYS+ G ++ ++ +FD M  RD VSW  ++ GY  CGQ  ++    ++M
Sbjct: 380 SDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKM 439

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                E N+                 IT M VL  C    AL  GKEIHA  ++  +  D
Sbjct: 440 LQQGVEANK-----------------ITYMCVLKACSNPVALKWGKEIHAEVVKAGIFAD 482

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + V +AL+ MY KCG +  A RV + M  R+V+TWN +I     +G G E L+  + M +
Sbjct: 483 LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKS 542

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E     E++PN  TF+ + +AC    +V EG   F  M+ DYGI P+  HYAC+VD+L R
Sbjct: 543 E-----EMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILAR 597

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG + +A  +I  MP +   A  W +LL ACR H NVEIGE AA+    LEP  A  YV 
Sbjct: 598 AGHLGEAEDVILTMPFK-PSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVS 656

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LS IY++A +W     +RK MKE GV+KEPG SWIE   E+H F+AGD SH ++E+++  
Sbjct: 657 LSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSE 716

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           LE L+++++  GYVPDT  V+H++++E KE  +C HSEKLAIA+G+++TPP T IRV+KN
Sbjct: 717 LEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKN 776

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH ATKFISKI  REII RD  RFHHFKNG CSCGDYW
Sbjct: 777 LRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 173/610 (28%), Positives = 297/610 (48%), Gaps = 42/610 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A     +EA   +  M +  ++PD F F ++L A +    L+ G+++H  V
Sbjct: 112 SWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   ++ TV N L++MY KCGS + D  +VFD +  +D+VSW ++       G    
Sbjct: 172 MEAGLA-NNATVGNALISMYAKCGS-VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           +L+ +  ML   V PS  T ++V  AC +L+    L  G+Q+H   +     +   +  A
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLA---ALEKGKQIHAQIVESEHHSDVRVSTA 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MY K G V DA+ +F+   +RD+++WNT++  L  + +  EA     +M    + PD
Sbjct: 287 LTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPD 346

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  ++L AC+    L  GKEIHA A+++ ++ D  F G+AL++MY     ++  R+VF
Sbjct: 347 RVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF-GNALINMYSKAGSMKDARQVF 405

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  + +  W A++ GY       E+   F KM +  G+  N  T   V+ AC    A 
Sbjct: 406 DRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ-QGVEANKITYMCVLKACSNPVAL 464

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IH   +K G+  D  V NALM MY + G +E +  + + M  RD V+WNT+I G 
Sbjct: 465 KWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGL 524

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               Q+G  L  L++ + M+ E+ R              PN+ T + V+  C   + + +
Sbjct: 525 ---AQNGRGLEALQKFEVMKSEEMR--------------PNATTFVNVMSACRVRNLVEE 567

Query: 523 GKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           G+   A   ++  ++ T+    + +VD+ A+ G L  A  V   MP + +   W  ++ A
Sbjct: 568 GRRQFASMRKDYGIVPTEKHY-ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626

Query: 580 YGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
              HG    G++  E    +  +         N  T+++L    + +GM  +   L   M
Sbjct: 627 CRAHGNVEIGEQAAEQCLKLEPQ---------NAGTYVSLSFIYAAAGMWRDVAKLRKLM 677

Query: 637 KDDYGIEPSP 646
           K+  G++  P
Sbjct: 678 KER-GVKKEP 686



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 219/437 (50%), Gaps = 17/437 (3%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           +R + SW     + A S   +E++ +Y  M +  ++P    +  VL A   +  L  GKQ
Sbjct: 208 SRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQ 267

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IHA +V+  +  S V V+  L  MY KCG+ + D  +VF+ +  +D ++WN+MI  L   
Sbjct: 268 IHAQIVESEHH-SDVRVSTALTKMYIKCGA-VKDAREVFECLPNRDVIAWNTMIGGLVDS 325

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G+ + A   F  ML   V P   T +++  AC   +R  GL  G+++H  +++ G   + 
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSAC---ARPGGLACGKEIHARAVKDGLVSDV 382

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
              NAL+ MY+K G + DA+ +F     RD+VSW  +V   +   + +E+    ++M  +
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G++ + ++   VL ACS+   L  GKEIHA  ++  I  D + V +AL+ MY  C  VE 
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLA-VANALMSMYFKCGSVED 501

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF--IKMEEVAGLWPNATTMSSVVPA 395
             RV + +S + +  WN +I G  QN    EAL  F  +K EE   + PNATT  +V+ A
Sbjct: 502 AIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEE---MRPNATTFVNVMSA 558

Query: 396 C-VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           C VR+     +          G+         ++D+ +R G +  ++ +   M  + + +
Sbjct: 559 CRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAA 618

Query: 455 -WNTMITGYTICGQHGD 470
            W  ++     C  HG+
Sbjct: 619 MWGALLAA---CRAHGN 632


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 332/882 (37%), Positives = 510/882 (57%), Gaps = 41/882 (4%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQT------RCKESWIESLRSEARSNQFREAI 62
           +LL S  L+S + H     +    P    +        C  SW   + + + +   R AI
Sbjct: 29  SLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAI 88

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
            ++  M    +  + FA P VLK V    D  LG Q+HA  +  G+G S V VAN LV M
Sbjct: 89  QAFHGMRAEGVCCNEFALPVVLKCV---PDARLGAQVHAMAMATGFG-SDVFVANALVAM 144

Query: 123 YGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           YG  G  M D  +VF+   +E++ VSWN +++   +  +   A++ F  M++S ++P+ F
Sbjct: 145 YGGFGF-MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
               V  AC+  SR   +  GRQVH   +R+G + + F  NAL+ MY K+GRVD A  +F
Sbjct: 204 GFSCVVNACTG-SRN--IEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +   D D+VSWN ++S    N     A+  L QM   G+ P+  +++S+L ACS     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G++IH + ++ +   D+ ++G  LVDMY     ++  R+VFD++  + + L NA+I+G 
Sbjct: 321 LGRQIHGFMIKANADSDD-YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
                 +EAL LF ++ +  GL  N TT+++V+ +    EA      +H  A+K+G   D
Sbjct: 380 SHGGRHDEALSLFYELRK-EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFD 438

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V N L+D Y +   +  +  +F++    D ++  +MIT  + C     A+ L  EM  
Sbjct: 439 AHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLR 498

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
              E                 P+   L ++L  C +LSA  +GK++HA+ I+    +D  
Sbjct: 499 KGLE-----------------PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            G+ALV  YAKCG +  A   F  +P R V++W+ +I     HG G+  LEL   MV EG
Sbjct: 542 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG 601

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                + PN +T  ++  AC+H+G+V E    F  MK+ +GI+ + +HY+C++DLLGRAG
Sbjct: 602 -----INPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAG 656

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           K++DA +L+N MP + + A  W +LLGA R+H++ E+G++AA+ LF+LEP+ +  +VLL+
Sbjct: 657 KLDDAMELVNSMPFQAN-ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N Y+SA +W++   VRK MK+  ++KEP  SWIE  D++H F+ GD SH  +++++  L 
Sbjct: 716 NTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLV 775

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L + M K G+VP+    LH+++  EKE LL  HSE+LA+AF +L+TPPG  IRV KNLR
Sbjct: 776 ELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLR 835

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C DCH A KFISKI SREII+RD+ RFHHF++GTCSCGDYW
Sbjct: 836 ICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  246 bits (627), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 190/669 (28%), Positives = 322/669 (48%), Gaps = 54/669 (8%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L   A  Q L  G  +HA ++K G   S  +  N L++ Y KC        +VFD I + 
Sbjct: 11  LTRYAAAQALLPGAHLHASLLKSG---SLASFRNHLISFYSKCRRPCC-ARRVFDEIPDP 66

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             VSW+S++      G    A++AF  M    V  + F L  V L C         RLG 
Sbjct: 67  CHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCV-----PDARLGA 120

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQN 261
           QVH  ++  G   + F+ NAL+AMY   G +DDA+ +F   + +R+ VSWN ++S+  +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D+  +A+    +M   GI+P     + V+ AC+    ++ G+++HA  +R     D  F 
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD-VFT 239

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +ALVDMY     V+    +F+ + D  +  WNA+I+G   N +D  A+ L ++M + +G
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KYSG 298

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L PN  T+SS++ AC  + AF     IHG  IK     D Y+   L+DMY++   ++ ++
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  RD +  N +I+G +  G+H +AL L  E++      NR              
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT------------- 405

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               TL  VL    +L A +  +++HA A++     D  V + L+D Y KC CL+ A RV
Sbjct: 406 ----TLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+     ++I    +I A      G+  ++L   M+ +G     ++P+     +L  AC+
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG-----LEPDPFVLSSLLNACA 516

Query: 622 HSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDK 678
                 +G  +  + +K  +      D +A   +V    + G +EDA    + +P     
Sbjct: 517 SLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSIEDAELAFSSLPER--G 570

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQLWDKAM 733
             +WS+++G    H + +     A  LF  +++  +  +++ ++++  +   A L D+A 
Sbjct: 571 VVSWSAMIGGLAQHGHGK----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 734 DVRKKMKEM 742
                MKEM
Sbjct: 627 RYFNSMKEM 635



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 180/399 (45%), Gaps = 51/399 (12%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +I+  L   +  + L  G  +HA  L++  L   SF  + L+  Y  CR   C RRVFD 
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLA--SFR-NHLISFYSKCRRPCCARRVFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I D     W++++T Y  N     A+  F  M    G+  N   +  VV  CV     PD
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGM-RAEGVCCNEFAL-PVVLKCV-----PD 115

Query: 405 KE---GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMIT 460
                 +H  A+  G G D +V NAL+ MY   G ++ ++ +F++ +  R+ VSWN +++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y    Q GDA+ +  EM           V+         +P       V+  C     +
Sbjct: 176 AYVKNDQCGDAIQVFGEM-----------VWS------GIQPTEFGFSCVVNACTGSRNI 218

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+++HA  +R     DV   +ALVDMY K G ++ A  +F+ MP  +V++WN +I   
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM---- 636
            ++G     +ELL  M   G     + PN  T  ++  ACS +G    G  +   M    
Sbjct: 279 VLNGHDHRAIELLLQMKYSG-----LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333

Query: 637 --KDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
              DDY G+         +VD+  +   ++DA ++ + M
Sbjct: 334 ADSDDYIGVG--------LVDMYAKNHFLDDARKVFDWM 364


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 318/831 (38%), Positives = 486/831 (58%), Gaps = 31/831 (3%)

Query: 53   ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
            A+   + EA   Y +M    +  +   + +VL A +  + L  G+ IH+H+ + G+  S 
Sbjct: 361  AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHS-SD 419

Query: 113  VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
            V + N+L++MY +CG D+    ++F+ + ++D +SWN++IA   R      A++ ++ M 
Sbjct: 420  VQIGNSLISMYARCG-DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQ 478

Query: 173  YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
               V+P   T + +  AC+N S       G+ +H + LR G + N  + NALM MY + G
Sbjct: 479  SEGVKPGRVTFLHLLSACTNSSAYSD---GKMIHEDILRSGIKSNGHLANALMNMYRRCG 535

Query: 232  RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
             + +A+ +F+    RD++SWN++++  +Q+  +  A     +M   G++PD ++ ASVL 
Sbjct: 536  SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595

Query: 292  ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
             C + E L+ G++IH   + + + +D + +G+AL++MY  C  ++    VF  +  + + 
Sbjct: 596  GCKNPEALELGRQIHMLIIESGLQLDVN-LGNALINMYIRCGSLQDAYEVFHSLRHRNVM 654

Query: 352  LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
             W AMI G+     D +A  LF +M+   G  P  +T SS++ AC+ S    + + +  H
Sbjct: 655  SWTAMIGGFADQGEDRKAFELFWQMQN-DGFKPVKSTFSSILKACMSSACLDEGKKVIAH 713

Query: 412  AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
             +  G   D  V NAL+  YS+ G +  ++ +FD M  RD +SWN MI GY   G  G A
Sbjct: 714  ILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTA 773

Query: 472  LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
            L    +MQ                 VL    N  + +++L  C + SAL +GK +HA  +
Sbjct: 774  LQFAYQMQE-------------QGVVL----NKFSFVSILNACSSFSALEEGKRVHAEIV 816

Query: 532  RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
            +  +  DV VG+AL+ MYAKCG L  A+ VFD    +NV+TWN +I AY  HG   + L+
Sbjct: 817  KRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALD 876

Query: 592  LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
                M  EG     +KP+  TF ++ +AC+HSG+V EG  +F  ++  +G+ P+ +HY C
Sbjct: 877  FFNCMDKEG-----IKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931

Query: 652  VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
            +V LLGRAG+ ++A  LIN MP   D A  W +LLGACRIH NV + E AA N   L   
Sbjct: 932  LVGLLGRAGRFQEAETLINQMPFPPD-AAVWETLLGACRIHGNVALAEHAANNALKLNAR 990

Query: 712  VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
              + YVLLSN+Y++A  WD    +R+ M+  G+RKEPG SWIE  + IH+F+A D SH +
Sbjct: 991  NPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 1050

Query: 772  SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
            + +++  L+ LS  M + GY PDT  VLHN+++E +ET LC HSE+LAIA+G+L TPPGT
Sbjct: 1051 TAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGT 1110

Query: 832  TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IR+ KNLR+C DCH A+KFISK+  REII RD  RFH FKNG CSC D+W
Sbjct: 1111 PIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  281 bits (720), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 173/599 (28%), Positives = 316/599 (52%), Gaps = 33/599 (5%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           + L+  K+IHA +V+ G G   + ++N L+NMY KC S + D ++VF ++  +D +SWNS
Sbjct: 96  RSLAEAKRIHAQMVEAGVG-PDIFLSNLLINMYVKCRS-VSDAHQVFLKMPRRDVISWNS 153

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +I+   + G    A + F  M  +   PS  T +S+  AC + +    L  G+++H   +
Sbjct: 154 LISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE---LEYGKKIHSKII 210

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
             G + +  + N+L+ MY K   +  A+ +F     RD+VS+NT++   +Q     E + 
Sbjct: 211 EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIG 270

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              QM+  GI PD V+  ++L A +   MLD GK IH  A+ N+ L  +  VG+AL  M+
Sbjct: 271 LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV-NEGLNSDIRVGTALATMF 329

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C +V   ++  +  +D+ + ++NA+I    Q+ + EEA   + +M    G+  N TT 
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS-DGVVMNRTTY 388

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
            SV+ AC  S+A    E IH H  ++G   D  + N+L+ MY+R G +  ++ +F+ M  
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD +SWN +I GY      G+A+ L ++MQ+              E V   KP  +T + 
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQS--------------EGV---KPGRVTFLH 491

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +L  C   SA + GK IH   +R+ + ++  + +AL++MY +CG +  A+ VF+    R+
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +I+WN +I  +  HG  +   +L   M  EG     ++P+++TF ++   C +   +  G
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEG-----LEPDKITFASVLVGCKNPEALELG 606

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
             + + +  + G++   +    ++++  R G ++DAY++ + +        +W++++G 
Sbjct: 607 RQI-HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL--RHRNVMSWTAMIGG 662



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 184/635 (28%), Positives = 312/635 (49%), Gaps = 39/635 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+    ++A   + EM  +   P    + ++L A     +L  GK+IH+ +
Sbjct: 150 SWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKI 209

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GY      V N+L+NMYGKC  D+    +VF  I  +D VS+N+M+    +    + 
Sbjct: 210 IEAGYQRDP-RVQNSLLNMYGKC-EDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +  F  M    + P   T +++  A +  S  D    G+++H  ++  G   +  +  A
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE---GKRIHKLAVNEGLNSDIRVGTA 324

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  M+ + G V  AK   ++F DRD+V +N ++++L+Q+  + EA     QM   G+  +
Sbjct: 325 LATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMN 384

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCREVECG 338
             +  SVL ACS  + L  G+ IH++       +D+ I NS     L+ MY  C ++   
Sbjct: 385 RTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNS-----LISMYARCGDLPRA 439

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +F+ +  + +  WNA+I GY + E   EA+ L+ +M+   G+ P   T   ++ AC  
Sbjct: 440 RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS-EGVKPGRVTFLHLLSACTN 498

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S A+ D + IH   ++ G+  + ++ NALM+MY R G I  ++ +F+    RD +SWN+M
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+   G +  A  L  EM+    E                 P+ IT  +VL GC    
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEGLE-----------------PDKITFASVLVGCKNPE 601

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  G++IH   I + L  DV +G+AL++MY +CG L  A  VF  +  RNV++W  +I 
Sbjct: 602 ALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIG 661

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            +   GE ++  EL   M  +G      KP + TF ++  AC  S  + EG  +   + +
Sbjct: 662 GFADQGEDRKAFELFWQMQNDG-----FKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             G E        ++    ++G + DA ++ + MP
Sbjct: 717 S-GYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 254/530 (47%), Gaps = 44/530 (8%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           N +R+  L   +++H   +  G   + F+ N L+ MY K   V DA  +F     RD++S
Sbjct: 91  NCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVIS 150

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+++S  +Q     +A     +M   G  P  ++  S+L AC     L+ GK+IH+  +
Sbjct: 151 WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKII 210

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
                 D   V ++L++MY  C ++   R+VF  I  + +  +N M+  Y Q  Y EE +
Sbjct: 211 EAGYQRDPR-VQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECI 269

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF +M    G+ P+  T  +++ A        + + IH  A+  GL  D  V  AL  M
Sbjct: 270 GLFGQMSS-EGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATM 328

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           + R G +  +K   +    RD V +N +I      G + +A     +M++          
Sbjct: 329 FVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS---------- 378

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
              D  V+    N  T ++VL  C    AL  G+ IH++      ++DV +G++L+ MYA
Sbjct: 379 ---DGVVM----NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           +CG L  AR +F+ MP R++I+WN II  Y    +  E ++L K M +EG     VKP  
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG-----VKPGR 486

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTF+ L +AC++S   S+G  + ++     GI+ +      ++++  R G + +A  +  
Sbjct: 487 VTFLHLLSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVF- 544

Query: 671 MMPPEFDKAG---AWSSLLGACRIHQNVEIGEIAAQNLFL------LEPD 711
               E  +A    +W+S++     H + E    AA  LFL      LEPD
Sbjct: 545 ----EGTRARDIISWNSMIAGHAQHGSYE----AAYKLFLEMKKEGLEPD 586



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 229/462 (49%), Gaps = 25/462 (5%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G++ R   SW   +   A+   +  A   ++EM +  ++PD   F +VL      + L L
Sbjct: 546 GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+QIH  +++ G  L  V + N L+NMY +CGS + D Y+VF  +  ++ +SW +MI   
Sbjct: 606 GRQIHMLIIESGLQL-DVNLGNALINMYIRCGS-LQDAYEVFHSLRHRNVMSWTAMIGGF 663

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G+   A E F  M     +P   T  S+  AC + +  D    G++V  + L  G E
Sbjct: 664 ADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE---GKKVIAHILNSGYE 720

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +T + NAL++ Y+K G + DA+ +F    +RD++SWN +++  +QN     A+ F  QM
Sbjct: 721 LDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQM 780

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             +G+  +  S  S+L ACS    L+ GK +HA  ++  +  D   VG+AL+ MY  C  
Sbjct: 781 QEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVR-VGAALISMYAKCGS 839

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E  + VFD  ++K +  WNAMI  Y Q+    +AL  F  M++  G+ P+ +T +S++ 
Sbjct: 840 LEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDK-EGIKPDGSTFTSILS 898

Query: 395 ACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           AC  S         F   E  HG +  +    + Y    L+ +  R GR + ++T+ + M
Sbjct: 899 ACNHSGLVMEGNRIFSSLESQHGLSPTI----EHY--GCLVGLLGRAGRFQEAETLINQM 952

Query: 448 EV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
               D   W T++     C  HG+  +      N  +   RN
Sbjct: 953 PFPPDAAVWETLLGA---CRIHGNVALAEHAANNALKLNARN 991



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 23/285 (8%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N      +V  C R  +  + + IH   ++ G+G D ++ N L++MY +   +  +  +F
Sbjct: 81  NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             M  RD +SWN++I+ Y   G    A  L  EMQ                      P+ 
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAG-----------------FIPSK 183

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           IT +++L  C + + L  GK+IH+  I      D  V ++L++MY KC  L  AR+VF  
Sbjct: 184 ITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSG 243

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  R+V+++N ++  Y      +E + L   M +EG     + P++VT+I L  A +   
Sbjct: 244 IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEG-----IPPDKVTYINLLDAFTTPS 298

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           M+ EG  + +K+  + G+         +  +  R G V  A Q +
Sbjct: 299 MLDEGKRI-HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL 342



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 130/277 (46%), Gaps = 14/277 (5%)

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP---NSITLMTVLPGCGALSALAK 522
           G  G A   L  ++ M +E++R +  +      +P+P   N    + ++  C    +LA+
Sbjct: 41  GAAGGASSNLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAE 100

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            K IHA  +   +  D+ + + L++MY KC  ++ A +VF  MP R+VI+WN +I  Y  
Sbjct: 101 AKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQ 160

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            G  ++  +L + M   G       P+++T+I++  AC     +  G  +  K+ +  G 
Sbjct: 161 QGFKKKAFQLFEEMQTAG-----FIPSKITYISILTACCSPAELEYGKKIHSKIIEA-GY 214

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE--IGEI 700
           +  P     ++++ G+   +  A Q+ + +        +++++LG       VE  IG  
Sbjct: 215 QRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR--DVVSYNTMLGLYAQKAYVEECIGLF 272

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
              +   + PD  + Y+ L + +++  + D+   + K
Sbjct: 273 GQMSSEGIPPDKVT-YINLLDAFTTPSMLDEGKRIHK 308


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 332/882 (37%), Positives = 510/882 (57%), Gaps = 41/882 (4%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQ------TRCKESWIESLRSEARSNQFREAI 62
           +LL S  L+S + H     +    P    +        C  SW   + + + +   R AI
Sbjct: 29  SLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAI 88

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
            ++  M    +  + FA P VLK V    D  LG Q+HA  +  G+G S V VAN LV M
Sbjct: 89  QAFHGMRAEGVCCNEFALPVVLKCV---PDARLGAQVHAMAMATGFG-SDVFVANALVAM 144

Query: 123 YGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           YG  G  M D  +VF+   +E++ VSWN +++   +  +   A++ F  M++S ++P+ F
Sbjct: 145 YGGFGF-MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
               V  AC+  SR   +  GRQVH   +R+G + + F  NAL+ MY K+GRVD A  +F
Sbjct: 204 GFSCVVNACTG-SRN--IEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +   D D+VSWN ++S    N     A+  L QM   G+ P+  +++S+L ACS     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G++IH + ++ +   D+ ++G  LVDMY     ++  R+VFD++  + + L NA+I+G 
Sbjct: 321 LGRQIHGFMIKANADSDD-YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
                 +EAL LF ++ +  GL  N TT+++V+ +    EA      +H  A+K+G   D
Sbjct: 380 SHGGRHDEALSLFYELRK-EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFD 438

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V N L+D Y +   +  +  +F++    D ++  +MIT  + C     A+ L  EM  
Sbjct: 439 AHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLR 498

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
              E                 P+   L ++L  C +LSA  +GK++HA+ I+    +D  
Sbjct: 499 KGLE-----------------PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            G+ALV  YAKCG +  A   F  +P R V++W+ +I     HG G+  LEL   MV EG
Sbjct: 542 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG 601

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                + PN +T  ++  AC+H+G+V E    F  MK+ +GI+ + +HY+C++DLLGRAG
Sbjct: 602 -----INPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAG 656

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           K++DA +L+N MP + + A  W +LLGA R+H++ E+G++AA+ LF+LEP+ +  +VLL+
Sbjct: 657 KLDDAMELVNSMPFQAN-ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N Y+SA +W++   VRK MK+  ++KEP  SWIE  D++H F+ GD SH  +++++  L 
Sbjct: 716 NTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLV 775

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L + M K G+VP+    LH+++  EKE LL  HSE+LA+AF +L+TPPG  IRV KNLR
Sbjct: 776 ELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLR 835

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C DCH A KFISKI SREII+RD+ RFHHF++GTCSCGDYW
Sbjct: 836 ICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 189/669 (28%), Positives = 321/669 (47%), Gaps = 54/669 (8%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L   A  Q L  G  +HA ++K G   S  +  N L++ Y KC        + FD I + 
Sbjct: 11  LTRYAAAQALLPGAHLHASLLKSG---SLASFRNHLISFYSKCRRPCC-ARRFFDEIPDP 66

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             VSW+S++      G    A++AF  M    V  + F L  V L C         RLG 
Sbjct: 67  CHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCV-----PDARLGA 120

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQN 261
           QVH  ++  G   + F+ NAL+AMY   G +DDA+ +F   + +R+ VSWN ++S+  +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D+  +A+    +M   GI+P     + V+ AC+    ++ G+++HA  +R     D  F 
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD-VFT 239

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +ALVDMY     V+    +F+ + D  +  WNA+I+G   N +D  A+ L ++M + +G
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KYSG 298

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L PN  T+SS++ AC  + AF     IHG  IK     D Y+   L+DMY++   ++ ++
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  RD +  N +I+G +  G+H +AL L  E++      NR              
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT------------- 405

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               TL  VL    +L A +  +++HA A++     D  V + L+D Y KC CL+ A RV
Sbjct: 406 ----TLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+     ++I    +I A      G+  ++L   M+ +G     ++P+     +L  AC+
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG-----LEPDPFVLSSLLNACA 516

Query: 622 HSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDK 678
                 +G  +  + +K  +      D +A   +V    + G +EDA    + +P     
Sbjct: 517 SLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSIEDAELAFSSLPER--G 570

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQLWDKAM 733
             +WS+++G    H + +     A  LF  +++  +  +++ ++++  +   A L D+A 
Sbjct: 571 VVSWSAMIGGLAQHGHGK----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 734 DVRKKMKEM 742
                MKEM
Sbjct: 627 RYFNSMKEM 635



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 179/399 (44%), Gaps = 51/399 (12%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +I+  L   +  + L  G  +HA  L++  L   SF  + L+  Y  CR   C RR FD 
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLA--SFR-NHLISFYSKCRRPCCARRFFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I D     W++++T Y  N     A+  F  M    G+  N   +  VV  CV     PD
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGM-RAEGVCCNEFAL-PVVLKCV-----PD 115

Query: 405 KE---GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMIT 460
                 +H  A+  G G D +V NAL+ MY   G ++ ++ +F++ +  R+ VSWN +++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y    Q GDA+ +  EM           V+         +P       V+  C     +
Sbjct: 176 AYVKNDQCGDAIQVFGEM-----------VWS------GIQPTEFGFSCVVNACTGSRNI 218

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+++HA  +R     DV   +ALVDMY K G ++ A  +F+ MP  +V++WN +I   
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM---- 636
            ++G     +ELL  M   G     + PN  T  ++  ACS +G    G  +   M    
Sbjct: 279 VLNGHDHRAIELLLQMKYSG-----LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN 333

Query: 637 --KDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
              DDY G+         +VD+  +   ++DA ++ + M
Sbjct: 334 ADSDDYIGVG--------LVDMYAKNHFLDDARKVFDWM 364


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 330/861 (38%), Positives = 510/861 (59%), Gaps = 42/861 (4%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVA 88
           + L     +T+    W   +    R+  + + +  ++++ + +D QPDNF FP+V+KA  
Sbjct: 98  SRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG 157

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
           GI D+ LG+ IH  V+K G  L  V V N LV MYGKCG+ + +  KVFD + E + VSW
Sbjct: 158 GILDVRLGEVIHGMVIKMGLVLD-VFVGNALVGMYGKCGA-VDEAMKVFDFMPETNLVSW 215

Query: 149 NSMIATLCRFGKWDLALEAFRMMLY----SNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           NSMI   C F +   + ++F +++       + P   T+V++   C+     D   +G  
Sbjct: 216 NSMI---CAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVD---IGMG 269

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG ++++G      + NA++ MY+K G +++A+  F    ++++VSWNT++S+ S    
Sbjct: 270 IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGD 329

Query: 264 FLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
             EA   L++M ++G  +K + V+I +VLPAC     L + KE+H Y+ R+     +  +
Sbjct: 330 VNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH--CFQHVEL 387

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +A +  Y  C  +    +VF  I DK ++ WNA+I G+ QN    +AL L  +M   +G
Sbjct: 388 SNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT-YSG 446

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
             P+  T+SS++ AC   ++    + IHG+ ++ GL  D +V  +L+  Y   G+   ++
Sbjct: 447 QQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSAR 506

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M+ ++ VSWN MI+GY+  G   ++L L R+               L E +   +
Sbjct: 507 VLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRK--------------SLSEGI---Q 549

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            + I +++V   C  LSAL  GKE H Y ++ +   D  VG +++DMYAK GC+  +R+V
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKV 609

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +NV +WN II+A+G+HG G+E +EL + M   G       P+  T+I +  AC 
Sbjct: 610 FDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM-----PDRFTYIGILMACG 664

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G+V EG+  F +M++   IEP  +HYAC++D+L RAG+++DA +L+N MP E D    
Sbjct: 665 HAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNR-I 723

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           WSSLL +CR    +EIGE  A+ L  LEPD A +YVLLSN+Y+    WD    VR+ MKE
Sbjct: 724 WSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKE 783

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
           +G++K+ GCSWIE G  ++ F+ GD    +S ++      L ER+ + GY P+TS VLH 
Sbjct: 784 IGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHE 843

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           V EEEK  +L GHSEKLAI+FG+L T  GTT+R+ KNLR+C DCH A K ISK   REI+
Sbjct: 844 VGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIV 903

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD +RFHHF++G CSC DYW
Sbjct: 904 VRDNKRFHHFRDGLCSCCDYW 924



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 312/620 (50%), Gaps = 39/620 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +L+A    +D+  G+++H  V    +  +   +   L+ MY  CGS + D   VFD
Sbjct: 45  AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPL-DSRLVFD 103

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRD 197
            +  K+ + WN++++   R G +   ++ F  ++  ++ +P +FT  SV  AC  +    
Sbjct: 104 NMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL--- 160

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            +RLG  +HG  +++G   + F+ NAL+ MY K G VD+A  +F    + +LVSWN+++ 
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220

Query: 257 SLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           + S+N    ++   L +M    G+ PD V++ ++LP C+    +D G  IH  A++   L
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLG-L 279

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            +   V +A+V MY  C  +   +  F   ++K +  WN MI+ +       EA  L  +
Sbjct: 280 SEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQE 339

Query: 376 ME-EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           M+ +   +  N  T+ +V+PAC+        + +HG++ +    +   + NA +  Y++ 
Sbjct: 340 MQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKC 398

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  ++ +F  +  +   SWN +I G+   G    AL LL +M                
Sbjct: 399 GALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQM---------------- 442

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            T    +P+  T+ ++L  C  L +L  GKEIH Y +RN L TD  VG++L+  Y  CG 
Sbjct: 443 -TYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGK 501

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
            + AR +FD M  +N+++WN +I  Y  +G   E L L +  ++EG     ++ +E+  +
Sbjct: 502 ASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEG-----IQSHEIAIV 556

Query: 615 ALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC-VVDLLGRAGKVEDAYQLINMM 672
           ++F ACS    +  G +   Y +K    ++       C ++D+  ++G ++++ ++ + +
Sbjct: 557 SVFGACSQLSALRLGKEAHGYVLK---ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGL 613

Query: 673 PPEFDKAGAWSSLLGACRIH 692
             +     +W++++ A  IH
Sbjct: 614 KDK--NVASWNAIIVAHGIH 631



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 254/498 (51%), Gaps = 33/498 (6%)

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV----SVALACSNLSRRD 197
           + ++ S+   IA LC       AL    +++ S+ + ++F  +    ++ L       + 
Sbjct: 2   QTNRPSFLQEIAALCETDNLTTAL----ILIQSHSQNAAFISLQAKEAIGLLLQACGNQK 57

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
            +  GR++H        + N +++N  L+ MYA  G   D++ +F + E ++L+ WN +V
Sbjct: 58  DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117

Query: 256 SSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           S  ++N  + + V +F+  ++    +PD  +  SV+ AC  +  +  G+ IH   ++  +
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGL 177

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           ++D  FVG+ALV MY  C  V+   +VFDF+ +  +  WN+MI  + +N +  ++  L +
Sbjct: 178 VLD-VFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLM 236

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M    GL P+  T+ +++P C          GIHG A+KLGL  +  V NA++ MYS+ 
Sbjct: 237 EMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKC 296

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  ++  F     ++ VSWNTMI+ +++ G   +A  LL+EMQ   EE          
Sbjct: 297 GYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM--------- 347

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                 K N +T++ VLP C     L   KE+H Y+ R+     V + +A +  YAKCG 
Sbjct: 348 ------KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGA 400

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           LN A +VF  +  + V +WN +I  +  +G+ ++ L LL  M   G      +P+  T  
Sbjct: 401 LNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQ-----QPDWFTIS 455

Query: 615 ALFAACSHSGMVSEGMDL 632
           +L  AC+H   +  G ++
Sbjct: 456 SLLLACAHLKSLQYGKEI 473


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/825 (40%), Positives = 489/825 (59%), Gaps = 34/825 (4%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  Y EM    +  D++ FP +LKA   ++DL  G +IH   +KYG   S V V N+LV
Sbjct: 42  ALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCD-SFVFVVNSLV 100

Query: 121 NMYGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            +Y KC +D+    K+FDR+    D VSWNS+I+     G    AL  F  ML + V  +
Sbjct: 101 ALYAKC-NDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTN 159

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKT 238
           ++T  +   AC + S    ++LG Q+H   L+ G   + ++ NAL+AMY + G++ +A  
Sbjct: 160 TYTFAAALQACEDSSF---IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAV 216

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F + E +D+V+WN++++   QN  + EA+ F   +    +KPD VSI S++ A   L  
Sbjct: 217 IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGY 276

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GKEIHAYA++N     N  VG+ L+DMY  C  +  G R FD ++ K +  W     
Sbjct: 277 LLNGKEIHAYAIKNG-FDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAA 335

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY QN+   +AL L  +++ + G+  +AT + S++ AC         + IHG+ I+ GL 
Sbjct: 336 GYAQNKCYLQALELLRQLQ-MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL- 393

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  +QN ++D+Y   G I+ +  IF+ +E +D VSW +MI+ Y   G    AL +   M
Sbjct: 394 SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM 453

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           +               ET L  +P+ +TL+++L    +LS L KGKEIH + IR     +
Sbjct: 454 K---------------ETGL--EPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILE 496

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             + + LVDMYA+CG +  A ++F     RN+I W  +I AYGMHG G+  +EL   M  
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKD 556

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E     ++ P+ +TF+AL  ACSHSG+V+EG      MK +Y +EP P+HY C+VDLLGR
Sbjct: 557 E-----KIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGR 611

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
              +E+AYQ++  M  E      W +LLGACRIH N EIGE+AA+ L  L+ D   +YVL
Sbjct: 612 RNCLEEAYQIVKSMQNE-PTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVL 670

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           +SN++++   W    +VR +MK  G+ K PGCSWIE G++IH FL+ D  H + ++++  
Sbjct: 671 VSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQK 730

Query: 779 LENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
           L  ++E++++EG YV  T  VLHNV EEEK  +L GHSE+LAIA+G+L T  GT IRV K
Sbjct: 731 LAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTK 790

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLRVC DCH     +S+   RE+I+RD  RFHHFK+G CSCGD+W
Sbjct: 791 NLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 180/612 (29%), Positives = 317/612 (51%), Gaps = 43/612 (7%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKCGS + D   +FD+++E+   +WN+M+      G+   ALE +R M +  V   S+
Sbjct: 1   MYGKCGSVL-DAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T   +  AC  +   + L  G ++HG +++ G +   F++N+L+A+YAK   ++ A+ LF
Sbjct: 60  TFPVLLKACGIV---EDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLF 116

Query: 241 -KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            + +   D+VSWN+I+S+ S N    EA+    +M   G+  +  + A+ L AC     +
Sbjct: 117 DRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFI 176

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G +IHA  L++  ++D  +V +ALV MY    ++     +F  +  K I  WN+M+TG
Sbjct: 177 KLGMQIHAAILKSGRVLD-VYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN    EAL  F  ++  A L P+  ++ S++ A  R     + + IH +AIK G   
Sbjct: 236 FIQNGLYSEALEFFYDLQN-ADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           +  V N L+DMY++   +      FD M  +D +SW T   GY     +  AL LLR++Q
Sbjct: 295 NILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQ 354

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
            ME         D+D T++          ++L  C  L+ L K KEIH Y IR  L +D 
Sbjct: 355 -MEG-------MDVDATMIG---------SILLACRGLNCLGKIKEIHGYTIRGGL-SDP 396

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           V+ + ++D+Y +CG +++A R+F+ +  ++V++W  +I  Y  +G   + LE+  +M   
Sbjct: 397 VLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKET 456

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGR 658
           G     ++P+ VT +++ +A      + +G ++  + ++  + +E S  +   +VD+  R
Sbjct: 457 G-----LEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYAR 509

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD---VASH 715
            G VEDAY++             W++++ A  +H   E    AA  LF+   D   +  H
Sbjct: 510 CGSVEDAYKIFTCTKNR--NLILWTAMISAYGMHGYGE----AAVELFMRMKDEKIIPDH 563

Query: 716 YVLLSNIYSSAQ 727
              L+ +Y+ + 
Sbjct: 564 ITFLALLYACSH 575



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 259/514 (50%), Gaps = 47/514 (9%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY K G V DA+ +F    +R + +WN ++     N + L A+   R+M   G+  D  +
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFD 343
              +L AC  +E L  G EIH  A++   D  +   FV ++LV +Y  C ++   R++FD
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFV---FVVNSLVALYAKCNDINGARKLFD 117

Query: 344 FISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            +  +  +  WN++I+ Y  N    EAL LF +M + AG+  N  T ++ + AC  S   
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLK-AGVVTNTYTFAAALQACEDSSFI 176

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH   +K G   D YV NAL+ MY R G++  +  IF ++E +D V+WN+M+TG+
Sbjct: 177 KLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGF 236

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G + +AL    ++QN +                  KP+ +++++++   G L  L  
Sbjct: 237 IQNGLYSEALEFFYDLQNAD-----------------LKPDQVSIISIIVASGRLGYLLN 279

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKEIHAYAI+N   ++++VG+ L+DMYAKC C+++  R FDLM  +++I+W      Y  
Sbjct: 280 GKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQ 339

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +    + LELL+ +  EG    +V    +  I L  AC        G++   K+K+ +G 
Sbjct: 340 NKCYLQALELLRQLQMEGM---DVDATMIGSILL--AC-------RGLNCLGKIKEIHGY 387

Query: 643 E-----PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ---N 694
                   P     ++D+ G  G ++ A ++   +  E     +W+S++ +C +H    N
Sbjct: 388 TIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESI--ECKDVVSWTSMI-SCYVHNGLAN 444

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
             +   ++     LEPD  +   +LS + S + L
Sbjct: 445 KALEVFSSMKETGLEPDYVTLVSILSAVCSLSTL 478


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 337/844 (39%), Positives = 488/844 (57%), Gaps = 31/844 (3%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +    +     +A+    +M +  + PD     + L +      L  G++I
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   ++ G  L  V VAN ++NMY KCGS + +  +VFD++ +K  VSW   I      G
Sbjct: 149 HFQAMQAGL-LFDVKVANCILNMYAKCGS-IEEAREVFDKMEKKSVVSWTITIGGYADCG 206

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           + + A E F+ M    V P+  T +SV  A S+ +    L+ G+ VH   L  G E +T 
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA---ALKWGKAVHSRILNAGHESDTA 263

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +  AL+ MYAK G   D + +F+   +RDL++WNT++  L++   + EA     QM   G
Sbjct: 264 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + P+ ++   +L AC +   L  GKEIH+   +     D   V +AL+ MY  C  ++  
Sbjct: 324 VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG-VQNALISMYSRCGSIKDA 382

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R VFD +  K +  W AMI G  ++ +  EAL ++ +M++ AG+ PN  T +S++ AC  
Sbjct: 383 RLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ-AGVEPNRVTYTSILNACSS 441

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A      IH   ++ GL  D +V N L++MYS  G ++ ++ +FD M  RD V++N M
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I GY       +AL L   +Q   EE                KP+ +T + +L  C    
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQ---EEG--------------LKPDKVTYINMLNACANSG 544

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L   +EIH    +    +D  VG+ALV  YAKCG  + A  VF+ M  RNVI+WN II 
Sbjct: 545 SLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIG 604

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
               HG GQ+ L+L + M  EG     VKP+ VTF++L +ACSH+G++ EG   F  M  
Sbjct: 605 GSAQHGRGQDALQLFERMKMEG-----VKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQ 659

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           D+ I P+ +HY C+VDLLGRAG++++A  LI  MP + +    W +LLGACRIH NV + 
Sbjct: 660 DFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTR-IWGALLGACRIHGNVPVA 718

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E AA++   L+ D A  YV LS++Y++A +WD A  +RK M++ GV KEPG SWI+ GD+
Sbjct: 719 ERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDK 778

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+A D SH QSE+++  L+ L+  M+ +GYVPDT  V+H+V+E EKE  +C HSE+L
Sbjct: 779 LHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERL 838

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIA+G+++TPPGT I + KNLRVC DCH ATKFISKI  REII RDV RFHHFK+G CSC
Sbjct: 839 AIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSC 898

Query: 879 GDYW 882
           GDYW
Sbjct: 899 GDYW 902



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 193/667 (28%), Positives = 333/667 (49%), Gaps = 45/667 (6%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           ++ Y++   + +   ++    +LK    ++DL  G+Q+H H++++       TV N L+N
Sbjct: 10  VVQYLQQQGAQVNSSDYM--KMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV-NALIN 66

Query: 122 MYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           MY +CGS + +  +V+ +++  E+   SWN+M+    ++G  + AL+  R M    + P 
Sbjct: 67  MYIQCGS-IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPD 125

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
             T++S   +C +      L  GR++H  +++ G  ++  + N ++ MYAK G +++A+ 
Sbjct: 126 RTTIMSFLSSCKSPG---ALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F   E + +VSW   +   +   +   A    ++M   G+ P+ ++  SVL A S    
Sbjct: 183 VFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK +H+  L      D + VG+ALV MY  C   +  R+VF+ + ++ +  WN MI 
Sbjct: 243 LKWGKAVHSRILNAGHESDTA-VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           G  +  Y EEA  ++ +M+   G+ PN  T   ++ ACV S A    + IH    K G  
Sbjct: 302 GLAEGGYWEEASEVYNQMQR-EGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  VQNAL+ MYSR G I+ ++ +FD M  +D +SW  MI G    G   +AL + +EM
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q    E                 PN +T  ++L  C + +AL  G+ IH   +   LATD
Sbjct: 421 QQAGVE-----------------PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             VG+ LV+MY+ CG +  AR+VFD M  R+++ +N +I  Y  H  G+E L+L   +  
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           EG     +KP++VT+I +  AC++SG +    ++   ++   G          +V    +
Sbjct: 524 EG-----LKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFFSDTSVGNALVSTYAK 577

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ-----NLFLLEPDVA 713
            G   DA  +   M        +W++++G    H     G+ A Q      +  ++PD+ 
Sbjct: 578 CGSFSDASIVFEKMTKR--NVISWNAIIGGSAQHGR---GQDALQLFERMKMEGVKPDIV 632

Query: 714 SHYVLLS 720
           +   LLS
Sbjct: 633 TFVSLLS 639



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 17/241 (7%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           NS   M +L  C  +  L  G+++H + I++    D    +AL++MY +CG +  AR+V+
Sbjct: 22  NSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVW 81

Query: 563 DLMPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
             +    R V +WN +++ Y  +G  ++ L+LL+ M   G     + P+  T ++  ++C
Sbjct: 82  KKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG-----LAPDRTTIMSFLSSC 136

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
              G +  G ++ ++     G+        C++++  + G +E+A ++ + M  E     
Sbjct: 137 KSPGALEWGREIHFQAMQA-GLLFDVKVANCILNMYAKCGSIEEAREVFDKM--EKKSVV 193

Query: 681 AWSSLLGA---C-RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL-WDKAMDV 735
           +W+  +G    C R     EI +   Q   +  P+  ++  +L+   S A L W KA+  
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKMEQEGVV--PNRITYISVLNAFSSPAALKWGKAVHS 251

Query: 736 R 736
           R
Sbjct: 252 R 252


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 325/841 (38%), Positives = 491/841 (58%), Gaps = 34/841 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    +   + EA   + +M +  ++PD   F ++L A A  +++  G++++  +
Sbjct: 178 SWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  + + V   L+NM+ KCG D+ D  KVFD +  +D V+W SMI  L R G++  
Sbjct: 238 LKAGWD-TDLFVGTALINMHIKCG-DIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMN 221
           A   F+ M    V+P     VS+  AC++    + L  G++VH     VG W+T  ++  
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNH---PEALEQGKKVHARMKEVG-WDTEIYVGT 351

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A+++MY K G ++DA  +F   + R++VSW  +++  +Q+ +  EA +F  +M   GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+  S+L ACS    L  G++I  + +      D+  V +AL+ MY  C  ++   RV
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR-VRTALLSMYAKCGSLKDAHRV 470

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ IS + +  WNAMIT Y Q+E  + AL  F  + +  G+ PN++T +S++  C  S++
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFTSILNVCKSSDS 529

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H   +K GL  D +V NAL+ M+   G +  +K +F+DM  RD VSWNT+I G
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +    QHG   +     + M+E                 KP+ IT   +L  C +  AL 
Sbjct: 590 FV---QHGKNQVAFDYFKMMQESG--------------IKPDKITFTGLLNACASPEALT 632

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+ +HA         DV+VG+ L+ MY KCG +  A +VF  +P +NV +W  +I  Y 
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYA 692

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G+E LEL   M  EG     VKP+ +TF+   +AC+H+G++ EG+  F  MK+ + 
Sbjct: 693 QHGRGKEALELFYQMQQEG-----VKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FN 746

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           IEP  +HY C+VDL GRAG + +A + I  M  E D +  W +LLGAC++H NVE+ E A
Sbjct: 747 IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD-SRVWGALLGACQVHLNVELAEKA 805

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           AQ    L+P+    +V+LSNIY++A +W +   +RK M + GV K+PG SWIE   ++H 
Sbjct: 806 AQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHT 865

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F + D +H Q+E++H  LE L   MR+ GYVPDT  VLH+V + EKE  L  HSE+LAI 
Sbjct: 866 FYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAIT 925

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           +G+L TPP T I ++KNLRVC DCH ATKFISKI  R+II RD  RFHHFK+G CSCGD+
Sbjct: 926 YGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDF 985

Query: 882 W 882
           W
Sbjct: 986 W 986



 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 192/637 (30%), Positives = 341/637 (53%), Gaps = 37/637 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +++ QF EA+     +  S IQ     + A+L+     ++L  G++I+ H+ K G     
Sbjct: 86  SKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQ-PD 144

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           + + NTL+NMY KCG+ +    ++FD + EKD  SWN ++    + G ++ A +    M+
Sbjct: 145 IFMWNTLINMYAKCGNTI-SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKL 230
             +V+P   T VS+  AC++    D    GR+++   L+ G W+T  F+  AL+ M+ K 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDK---GRELYNLILKAG-WDTDLFVGTALINMHIKC 259

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G + DA  +F +   RDLV+W ++++ L+++ +F +A    ++M   G++PD V+  S+L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKK 349
            AC+H E L+ GK++HA     ++  D   +VG+A++ MY  C  +E    VFD +  + 
Sbjct: 320 RACNHPEALEQGKKVHARM--KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI G+ Q+   +EA + F KM E +G+ PN  T  S++ AC    A    + I 
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQ 436

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
            H I+ G G D  V+ AL+ MY++ G ++ +  +F+ +  ++ V+WN MIT Y    Q+ 
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL   + +              L E +   KPNS T  ++L  C +  +L  GK +H  
Sbjct: 497 NALATFQAL--------------LKEGI---KPNSSTFTSILNVCKSSDSLELGKWVHFL 539

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            ++  L +D+ V +ALV M+  CG L  A+ +F+ MP R++++WN II  +  HG+ Q  
Sbjct: 540 IMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVA 599

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
            +  K M   G     +KP+++TF  L  AC+    ++EG  L + +  +   +      
Sbjct: 600 FDYFKMMQESG-----IKPDKITFTGLLNACASPEALTEGRRL-HALITEAAFDCDVLVG 653

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             ++ +  + G +EDA+Q+ + +P +     +W+S++
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMI 688



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 307/634 (48%), Gaps = 46/634 (7%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   +W   +   AR  +F++A   +  M    +QPD  AF ++L+A    + L  GK+
Sbjct: 274 TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKK 333

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HA + + G+  + + V   +++MY KCGS M D  +VFD +  ++ VSW +MIA   + 
Sbjct: 334 VHARMKEVGWD-TEIYVGTAILSMYTKCGS-MEDALEVFDLVKGRNVVSWTAMIAGFAQH 391

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NT 217
           G+ D A   F  M+ S +EP+  T +S+  ACS+ S    L+ G+Q+  + +  G   + 
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS---ALKRGQQIQDHIIEAGYGSDD 448

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            +  AL++MYAK G + DA  +F+    +++V+WN ++++  Q++++  A+   + +   
Sbjct: 449 RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GIKP+  +  S+L  C   + L+ GK +H   ++  +  D   V +ALV M+ NC ++  
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD-LHVSNALVSMFVNCGDLMS 567

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            + +F+ +  + +  WN +I G+ Q+  ++ A   F  M+E +G+ P+  T + ++ AC 
Sbjct: 568 AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE-SGIKPDKITFTGLLNACA 626

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             EA  +   +H    +     D  V   L+ MY++ G IE +  +F  +  ++  SW +
Sbjct: 627 SPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTS 686

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MITGY   G+  +AL L  +MQ               E V   KP+ IT +  L  C   
Sbjct: 687 MITGYAQHGRGKEALELFYQMQQ--------------EGV---KPDWITFVGALSACAHA 729

Query: 518 SALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
             + +G   H  +++   +   +     +VD++ + G LN A      M V  +   W  
Sbjct: 730 GLIEEGLH-HFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788

Query: 576 IIMAYGMHGEGQEVLELLKNMVAE--GSRGGEVKPNEV-TFIALFAACSHSGMVSEGMDL 632
           ++ A  +H         L   +AE    +  E+ PN+   F+ L    + +GM  E   +
Sbjct: 789 LLGACQVH---------LNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKM 839

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
             K+  D G+   P      VD     GKV   Y
Sbjct: 840 -RKVMLDRGVVKKPGQSWIEVD-----GKVHTFY 867



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 264/535 (49%), Gaps = 35/535 (6%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT---LVSVALACSNLSRRDGL 199
           KD    N+++  L + G+++ A++    +  S+++    T   L+ + +   NL   DG 
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG--DGE 130

Query: 200 RLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           R+   +  + ++    + F+ N L+ MYAK G    AK +F    ++D+ SWN ++    
Sbjct: 131 RIYNHIKKSGVQP---DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           Q+  + EA     QM    +KPD  +  S+L AC+    +D G+E++   L+     D  
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD-L 246

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           FVG+AL++M+  C ++    +VFD +  + +  W +MITG  ++   ++A  LF +MEE 
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE- 305

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ P+     S++ AC   EA    + +H    ++G   + YV  A++ MY++ G +E 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +FD ++ R+ VSW  MI G+   G+  +A +   +M     E               
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE--------------- 410

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
             PN +T M++L  C + SAL +G++I  + I     +D  V +AL+ MYAKCG L  A 
Sbjct: 411 --PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RVF+ +  +NV+ WN +I AY  H +    L   + ++ EG     +KPN  TF ++   
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG-----IKPNSSTFTSILNV 523

Query: 620 CSHSGMVSEGMDL-FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           C  S  +  G  + F  MK   G+E        +V +    G +  A  L N MP
Sbjct: 524 CKSSDSLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 162/309 (52%), Gaps = 25/309 (8%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T S+++  C++ +   D E I+ H  K G+  D ++ N L++MY++ G    +K IFDDM
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +D  SWN ++ GY    QHG    L  E   + E+  +++V          KP+  T 
Sbjct: 172 REKDVYSWNLLLGGYV---QHG----LYEEAFKLHEQMVQDSV----------KPDKRTF 214

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L  C     + KG+E++   ++    TD+ VG+AL++M+ KCG +  A +VFD +P 
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+++TW  +I     HG  ++   L + M  EG     V+P++V F++L  AC+H   + 
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEG-----VQPDKVAFVSLLRACNHPEALE 329

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G  +  +MK + G +        ++ +  + G +EDA ++ +++        +W++++ 
Sbjct: 330 QGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR--NVVSWTAMIA 386

Query: 688 ACRIHQNVE 696
               H  ++
Sbjct: 387 GFAQHGRID 395



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 140/302 (46%), Gaps = 36/302 (11%)

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           +++DT   N ++   +  GQ  +A+ +L  + +   +  R                  T 
Sbjct: 71  DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQ-----------------TY 113

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
             +L  C     L  G+ I+ +  ++ +  D+ + + L++MYAKCG    A+++FD M  
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE 173

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++V +WN+++  Y  HG  +E  +L + MV +      VKP++ TF+++  AC+ +  V 
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-----VKPDKRTFVSMLNACADARNVD 228

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G +L Y +    G +        ++++  + G + DA ++ + +P        W+S++ 
Sbjct: 229 KGREL-YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR--DLVTWTSMIT 285

Query: 688 ACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
               H   +     A NLF       ++PD  + +V L    +  +  ++   V  +MKE
Sbjct: 286 GLARHGRFK----QACNLFQRMEEEGVQPDKVA-FVSLLRACNHPEALEQGKKVHARMKE 340

Query: 742 MG 743
           +G
Sbjct: 341 VG 342


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 320/772 (41%), Positives = 470/772 (60%), Gaps = 45/772 (5%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+++ K GS + +  +VF+ I +K    +++M+    +    + AL     M Y +V+P
Sbjct: 87  LVSLFSKYGS-INEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVD 234
             +    +   C +      L+ G+++HG    NS      N F M  ++ MYAK  ++D
Sbjct: 146 VVYNFTYLLKVCGD---NADLKRGKEIHGQLITNSFAA---NVFAMTGVVNMYAKCRQID 199

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           DA  +F    +RDLVSWNTI++  SQN    +A+  + +M   G +PD +++ +VLPA +
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259

Query: 295 HLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            + +L  GK IH YA+R     L++   + +AL DMY  C  VE  R +FD +  K +  
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFAKLVN---ISTALADMYSKCGSVETARLIFDGMDQKTVVS 316

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN+M+ GY QN   E+A+ +F KM E  G+ P   T+   + AC         + +H   
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLGDLERGKFVHKFV 375

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            +L LG D  V N+L+ MYS+  R++I+  IF+++  R  VSWN MI GY   G+  +AL
Sbjct: 376 DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
               EM++                 L  KP+S T+++V+P    LS     K IH   IR
Sbjct: 436 NCFSEMKS-----------------LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           + L  ++ V +ALVDMY+KCG ++ AR++FD++  R+VITWN +I  YG HG G+  L+L
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M     + G V+PN++T++++ +ACSHSG+V EG+  F  MK DYG+EPS DHY  +
Sbjct: 539 FDKM-----KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593

Query: 653 VDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           VDLLGRAG++++A+  I  MP  P     GA     GAC+IH+N+E+GE AA+ LF L P
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXX---GACKIHKNIEVGEKAAKKLFELNP 650

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           D   ++VLL+NIY+S   W K  +VRK M++ G++K PGCS +E  +E+H F +G  +H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           QS++++ FLE L   ++  GYVPDT+ +L +V ++ +E LL  HSEKLAIAFG+LNT PG
Sbjct: 711 QSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPG 769

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TTI V KNLRVC DCH ATK+IS +  REII+RD++RFHHFKNG CSCGDYW
Sbjct: 770 TTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 265/531 (49%), Gaps = 36/531 (6%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+++    A+     M   D++P  + F  +LK      DL  GK+IH  ++   +
Sbjct: 119 LKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSF 178

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             ++V     +VNMY KC   + D YK+FDR+ E+D VSWN++IA   + G    ALE  
Sbjct: 179 A-ANVFAMTGVVNMYAKC-RQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV 236

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMY 227
             M      P S TLV+V  A +++     L +G+ +HG ++R G      I  AL  MY
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGL---LMVGKSIHGYAIRAGFAKLVNISTALADMY 293

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           +K G V+ A+ +F   + + +VSWN+++    QN +  +A+    +M   GI P GV+I 
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 288 SVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
             L AC+ L  L+ GK +H +     L +DI + NS     L+ MY  C+ V+    +F+
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS-----LISMYSKCKRVDIASDIFN 408

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            ++ +    WNAMI GY QN    EAL  F +M+ + G+ P++ TM SV+PA        
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTR 467

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHG  I+  L ++ +V  AL+DMYS+ G I +++ +FD +  R  ++WN MI GY 
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G    AL L  +M+    E                 PN IT ++V+  C     + +G
Sbjct: 528 THGLGRAALDLFDKMKKGAVE-----------------PNDITYLSVISACSHSGLVDEG 570

Query: 524 KEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              H  +++     +  +    A+VD+  + G +  A    + MP+   IT
Sbjct: 571 LR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 221/415 (53%), Gaps = 13/415 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++   ++A+   + M     +PD+     VL A A +  L +GK IH + 
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+    V ++  L +MY KCGS +     +FD + +K  VSWNSM+    + G+ + 
Sbjct: 275 IRAGFA-KLVNISTALADMYSKCGS-VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMN 221
           A+  F  ML   ++P+  T++    AC++L     L  G+ VH   + L +G  +  +MN
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLG---DLERGKFVHKFVDQLNLGS-DISVMN 388

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L++MY+K  RVD A  +F +   R  VSWN ++   +QN +  EA+    +M   G+KP
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++ SV+PA + L +    K IH   +R+  L  N FV +ALVDMY  C  +   R++
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKL 507

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD ISD+ +  WNAMI GYG +     AL LF KM++ A + PN  T  SV+ AC  S  
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA-VEPNDITYLSVISACSHS-G 565

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             D+   H  ++K   G +  + +  A++D+  R GRI+ +    ++M +   ++
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 24/337 (7%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           L   G   +   SW   +    ++ +  +AI  + +M    I P        L A A + 
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC-----GSDMWDVYKVFDRITEKDQV 146
           DL  GK +H  V +   G S ++V N+L++MY KC      SD      +F+ +  +  V
Sbjct: 364 DLERGKFVHKFVDQLNLG-SDISVMNSLISMYSKCKRVDIASD------IFNNLNGRTHV 416

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SWN+MI    + G+   AL  F  M    ++P SFT+VSV  A + LS     R  + +H
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVT---RHAKWIH 473

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           G  +R   + N F+  AL+ MY+K G +  A+ LF    DR +++WN ++     +    
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SA 324
            A+    +M    ++P+ ++  SV+ ACSH  ++D G   H  +++ D  ++ S     A
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGA 592

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           +VD+      +   +  +DFI +  I+     IT YG
Sbjct: 593 MVDLLGRAGRI---KEAWDFIENMPIS---PGITVYG 623



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 27/275 (9%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK GL  +   Q  L+ ++S+ G I  +  +F+ ++ +    ++TM+ GY        AL
Sbjct: 73  IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
             L  M+           YD        KP       +L  CG  + L +GKEIH   I 
Sbjct: 133 AFLCRMR-----------YD------DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           N  A +V   + +V+MYAKC  ++ A ++FD MP R++++WN II  +  +G  ++ LEL
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC 651
           +  M  EG R     P+ +T + +  A +  G++  G  +  Y ++   G     +    
Sbjct: 236 VLRMQDEGQR-----PDSITLVTVLPAAADVGLLMVGKSIHGYAIRA--GFAKLVNISTA 288

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           + D+  + G VE A  + + M  +     +W+S++
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQK--TVVSWNSMM 321


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 325/841 (38%), Positives = 491/841 (58%), Gaps = 34/841 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    +   + EA   + +M +  ++PD   F ++L A A  +++  G++++  +
Sbjct: 178 SWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  + + V   L+NM+ KCG D+ D  KVFD +  +D V+W SMI  L R G++  
Sbjct: 238 LKAGWD-TDLFVGTALINMHIKCG-DIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMN 221
           A   F+ M    V+P     VS+  AC++    + L  G++VH     VG W+T  ++  
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNH---PEALEQGKKVHARMKEVG-WDTEIYVGT 351

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A+++MY K G ++DA  +F   + R++VSW  +++  +Q+ +  EA +F  +M   GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+  S+L ACS    L  G++I  + +      D+  V +AL+ MY  C  ++   RV
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR-VRTALLSMYAKCGSLKDAHRV 470

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ IS + +  WNAMIT Y Q+E  + AL  F  + +  G+ PN++T +S++  C  S++
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFTSILNVCKSSDS 529

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H   +K GL  D +V NAL+ M+   G +  +K +F+DM  RD VSWNT+I G
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +    QHG   +     + M+E                 KP+ IT   +L  C +  AL 
Sbjct: 590 FV---QHGKNQVAFDYFKMMQESG--------------IKPDKITFTGLLNACASPEALT 632

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+ +HA         DV+VG+ L+ MY KCG +  A +VF  +P +NV +W  +I  Y 
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYA 692

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G+E LEL   M  EG     VKP+ +TF+   +AC+H+G++ EG+  F  MK+ + 
Sbjct: 693 QHGRGKEALELFYQMQQEG-----VKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FN 746

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           IEP  +HY C+VDL GRAG + +A + I  M  E D +  W +LLGAC++H NVE+ E A
Sbjct: 747 IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD-SRVWGALLGACQVHLNVELAEKA 805

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           AQ    L+P+    +V+LSNIY++A +W +   +RK M + GV K+PG SWIE   ++H 
Sbjct: 806 AQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHT 865

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F + D +H Q+E++H  LE L   MR+ GYVPDT  VLH+V + EKE  L  HSE+LAI 
Sbjct: 866 FYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAIT 925

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           +G+L TPP T I ++KNLRVC DCH ATKFISKI  R+II RD  RFHHFK+G CSCGD+
Sbjct: 926 YGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDF 985

Query: 882 W 882
           W
Sbjct: 986 W 986



 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/643 (30%), Positives = 342/643 (53%), Gaps = 37/643 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +++ QF EA+     +  S IQ     + A+L+     ++L  G++I+ H+ K G     
Sbjct: 86  SKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQ-PD 144

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           + + NTL+NMY KCG+ +    ++FD + EKD  SWN ++    + G ++ A +    M+
Sbjct: 145 IFMRNTLINMYAKCGNTI-SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKL 230
             +V+P   T VS+  AC++    D    GR+++   L+ G W+T  F+  AL+ M+ K 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDK---GRELYNLILKAG-WDTDLFVGTALINMHIKC 259

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G + DA  +F +   RDLV+W ++++ L+++ +F +A    ++M   G++PD V+  S+L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKK 349
            AC+H E L+ GK++HA     ++  D   +VG+A++ MY  C  +E    VFD +  + 
Sbjct: 320 RACNHPEALEQGKKVHARM--KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI G+ Q+   +EA + F KM E +G+ PN  T  S++ AC    A    + I 
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQ 436

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
            H I+ G G D  V+ AL+ MY++ G ++ +  +F+ +  ++ V+WN MIT Y    Q+ 
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYD 496

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL   + +              L E +   KPNS T  ++L  C +  +L  GK +H  
Sbjct: 497 NALATFQAL--------------LKEGI---KPNSSTFTSILNVCKSSDSLELGKWVHFL 539

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            ++  L +D+ V +ALV M+  CG L  A+ +F+ MP R++++WN II  +  HG+ Q  
Sbjct: 540 IMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVA 599

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
            +  K M   G     +KP+++TF  L  AC+    ++EG  L + +  +   +      
Sbjct: 600 FDYFKMMQESG-----IKPDKITFTGLLNACASPEALTEGRRL-HALITEAAFDCDVLVG 653

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             ++ +  + G +EDA+Q+ + +P +     +W+S++     H
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMIAGYAQH 694



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 264/535 (49%), Gaps = 35/535 (6%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT---LVSVALACSNLSRRDGL 199
           KD    N+++  L + G+++ A++    +  S+++    T   L+ + +   NL   DG 
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG--DGE 130

Query: 200 RLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           R+   +  + ++    + F+ N L+ MYAK G    AK +F    ++D+ SWN ++    
Sbjct: 131 RIYNHIKKSGVQP---DIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           Q+  + EA     QM    +KPD  +  S+L AC+    +D G+E++   L+     D  
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD-L 246

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           FVG+AL++M+  C ++    +VFD +  + +  W +MITG  ++   ++A  LF +MEE 
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE- 305

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ P+     S++ AC   EA    + +H    ++G   + YV  A++ MY++ G +E 
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +FD ++ R+ VSW  MI G+   G+  +A +   +M     E               
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE--------------- 410

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
             PN +T M++L  C + SAL +G++I  + I     +D  V +AL+ MYAKCG L  A 
Sbjct: 411 --PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RVF+ +  +NV+ WN +I AY  H +    L   + ++ EG     +KPN  TF ++   
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG-----IKPNSSTFTSILNV 523

Query: 620 CSHSGMVSEGMDL-FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           C  S  +  G  + F  MK   G+E        +V +    G +  A  L N MP
Sbjct: 524 CKSSDSLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 172/634 (27%), Positives = 306/634 (48%), Gaps = 46/634 (7%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   +W   +   AR  +F++A   +  M    +QPD  AF ++L+A    + L  GK+
Sbjct: 274 TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKK 333

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HA + + G+  + + V   +++MY KCGS M D  +VFD +  ++ VSW +MIA   + 
Sbjct: 334 VHARMKEVGWD-TEIYVGTAILSMYTKCGS-MEDALEVFDLVKGRNVVSWTAMIAGFAQH 391

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NT 217
           G+ D A   F  M+ S +EP+  T +S+  ACS+ S    L+ G+Q+  + +  G   + 
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS---ALKRGQQIQDHIIEAGYGSDD 448

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            +  AL++MYAK G + DA  +F+    +++V+WN ++++  Q++++  A+   + +   
Sbjct: 449 RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GIKP+  +  S+L  C   + L+ GK +H   ++  +  D   V +ALV M+ NC ++  
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD-LHVSNALVSMFVNCGDLMS 567

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            + +F+ +  + +  WN +I G+ Q+  ++ A   F  M+E +G+ P+  T + ++ AC 
Sbjct: 568 AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE-SGIKPDKITFTGLLNACA 626

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             EA  +   +H    +     D  V   L+ MY++ G IE +  +F  +  ++  SW +
Sbjct: 627 SPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTS 686

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI GY   G+  +AL L  +MQ               E V   KP+ IT +  L  C   
Sbjct: 687 MIAGYAQHGRGKEALELFYQMQQ--------------EGV---KPDWITFVGALSACAHA 729

Query: 518 SALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
             + +G   H  +++   +   +     +VD++ + G LN A      M V  +   W  
Sbjct: 730 GLIEEGLH-HFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788

Query: 576 IIMAYGMHGEGQEVLELLKNMVAE--GSRGGEVKPNEV-TFIALFAACSHSGMVSEGMDL 632
           ++ A  +H         L   +AE    +  E+ PN+   F+ L    + +GM  E   +
Sbjct: 789 LLGACQVH---------LNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKM 839

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
             K+  D G+   P      VD     GKV   Y
Sbjct: 840 -RKVMLDRGVVKKPGQSWIEVD-----GKVHTFY 867



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 163/309 (52%), Gaps = 25/309 (8%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T S+++  C++ +   D E I+ H  K G+  D +++N L++MY++ G    +K IFDDM
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +D  SWN ++ GY    QHG    L  E   + E+  +++V          KP+  T 
Sbjct: 172 REKDVYSWNLLLGGYV---QHG----LYEEAFKLHEQMVQDSV----------KPDKRTF 214

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L  C     + KG+E++   ++    TD+ VG+AL++M+ KCG +  A +VFD +P 
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+++TW  +I     HG  ++   L + M  EG     V+P++V F++L  AC+H   + 
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEG-----VQPDKVAFVSLLRACNHPEALE 329

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G  +  +MK + G +        ++ +  + G +EDA ++ +++        +W++++ 
Sbjct: 330 QGKKVHARMK-EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR--NVVSWTAMIA 386

Query: 688 ACRIHQNVE 696
               H  ++
Sbjct: 387 GFAQHGRID 395



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 140/302 (46%), Gaps = 36/302 (11%)

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           +++DT   N ++   +  GQ  +A+ +L  + +   +  R                  T 
Sbjct: 71  DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQ-----------------TY 113

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
             +L  C     L  G+ I+ +  ++ +  D+ + + L++MYAKCG    A+++FD M  
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE 173

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++V +WN+++  Y  HG  +E  +L + MV +      VKP++ TF+++  AC+ +  V 
Sbjct: 174 KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-----VKPDKRTFVSMLNACADARNVD 228

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G +L Y +    G +        ++++  + G + DA ++ + +P        W+S++ 
Sbjct: 229 KGREL-YNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR--DLVTWTSMIT 285

Query: 688 ACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
               H   +     A NLF       ++PD  + +V L    +  +  ++   V  +MKE
Sbjct: 286 GLARHGRFK----QACNLFQRMEEEGVQPDKVA-FVSLLRACNHPEALEQGKKVHARMKE 340

Query: 742 MG 743
           +G
Sbjct: 341 VG 342


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 329/882 (37%), Positives = 505/882 (57%), Gaps = 41/882 (4%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQT------RCKESWIESLRSEARSNQFREAI 62
            LL S  L+SL+ H     +    P    +        C  SW   + + + +   R AI
Sbjct: 29  NLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAI 88

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
            ++  M    +  + FA P VLK V    D  LG Q+HA  +  G+G S V VAN LV M
Sbjct: 89  QAFHGMRAEGVCCNEFALPVVLKCV---PDAQLGAQVHAMAMATGFG-SDVFVANALVAM 144

Query: 123 YGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           YG  G  M D  +VFD   +E++ VSWN +++   +  +   A++ F  M++S ++P+ F
Sbjct: 145 YGGFGF-MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
               V  AC+     D    GRQVH   +R+G E + F  NAL+ MY K+GRVD A  +F
Sbjct: 204 GFSCVVNACTGSRNIDA---GRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 260

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +   D D+VSWN ++S    N     A+  L QM   G+ P+   ++S+L AC+     D
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 320

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G++IH + ++ +   D+ ++G  LVDMY     ++   +VFD++S + + LWNA+I+G 
Sbjct: 321 LGRQIHGFMIKANADSDD-YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 379

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
                 +EA  +F  + +  GL  N TT+++V+ +    EA      +H  A K+G   D
Sbjct: 380 SHGGRHDEAFSIFYGLRK-EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFD 438

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V N L+D Y +   +  +  +F++    D ++  +MIT  + C     A+ L  EM  
Sbjct: 439 AHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR 498

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
              E                 P+   L ++L  C +LSA  +GK++HA+ I+    +D  
Sbjct: 499 KGLE-----------------PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            G+ALV  YAKCG +  A   F  +P R V++W+ +I     HG G+  LEL   MV EG
Sbjct: 542 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG 601

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                + PN +T  ++  AC+H+G+V E    F  MK+ +GI+ + +HY+C++DLLGRAG
Sbjct: 602 -----INPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAG 656

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           K++DA +L+N MP + + A  W +LLGA R+H++ E+G++AA+ LF+LEP+ +  +VLL+
Sbjct: 657 KLDDAMELVNSMPFQAN-ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N Y+S+ +W++   VRK MK+  ++KEP  SW+E  D++H F+ GD SH  +++++  L+
Sbjct: 716 NTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLD 775

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L + M K GY+P+    LH+++  EKE LL  HSE+LA+AF +L+TPPG  IRV KNLR
Sbjct: 776 ELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLR 835

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C DCH A KFIS I SREII+RD+ RFHHF++GTCSCGDYW
Sbjct: 836 ICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 188/669 (28%), Positives = 323/669 (48%), Gaps = 54/669 (8%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L   A  Q L  G  +HA+++K G+ L+S+   N L++ Y KC        +VFD I + 
Sbjct: 11  LTRYAAAQALLPGAHLHANLLKSGF-LASLR--NHLISFYSKCRRPCC-ARRVFDEIPDP 66

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             VSW+S++      G    A++AF  M    V  + F L  V L C         +LG 
Sbjct: 67  CHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCV-----PDAQLGA 120

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSSLSQN 261
           QVH  ++  G   + F+ NAL+AMY   G +DDA+ +F ++  +R+ VSWN ++S+  +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D+  +A+    +M   GI+P     + V+ AC+    +D G+++HA  +R     D  F 
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD-VFT 239

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +ALVDMY     V+    +F+ + D  +  WNA+I+G   N +D  A+ L ++M+  +G
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS-SG 298

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L PN   +SS++ AC  + AF     IHG  IK     D Y+   L+DMY++   ++ + 
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 358

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  RD + WN +I+G +  G+H +A  +   ++      NR              
Sbjct: 359 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT------------- 405

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               TL  VL    +L A +  +++HA A +     D  V + L+D Y KC CL+ A RV
Sbjct: 406 ----TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 461

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+     ++I    +I A      G+  ++L   M+ +G     ++P+     +L  AC+
Sbjct: 462 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG-----LEPDPFVLSSLLNACA 516

Query: 622 HSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDK 678
                 +G  +  + +K  +      D +A   +V    + G +EDA    + +P     
Sbjct: 517 SLSAYEQGKQVHAHLIKRQF----MSDAFAGNALVYTYAKCGSIEDAELAFSSLPER--G 570

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQLWDKAM 733
             +WS+++G    H + +     A  LF  +++  +  +++ ++++  +   A L D+A 
Sbjct: 571 VVSWSAMIGGLAQHGHGK----RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 734 DVRKKMKEM 742
                MKEM
Sbjct: 627 RYFNSMKEM 635



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 186/416 (44%), Gaps = 53/416 (12%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +I+  L   +  + L  G  +HA  L++  L   + + + L+  Y  CR   C RRVFD 
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGFL---ASLRNHLISFYSKCRRPCCARRVFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I D     W++++T Y  N     A+  F  M    G+  N   +  VV  CV     PD
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGM-RAEGVCCNEFAL-PVVLKCV-----PD 115

Query: 405 KE---GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMIT 460
            +    +H  A+  G G D +V NAL+ MY   G ++ ++ +FD+    R+ VSWN +++
Sbjct: 116 AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y    Q GDA+ +  EM           V+         +P       V+  C     +
Sbjct: 176 AYVKNDQCGDAIQVFGEM-----------VWS------GIQPTEFGFSCVVNACTGSRNI 218

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+++HA  +R     DV   +ALVDMY K G ++ A  +F+ MP  +V++WN +I   
Sbjct: 219 DAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGC 278

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM---- 636
            ++G     +ELL  M + G     + PN     ++  AC+ +G    G  +   M    
Sbjct: 279 VLNGHDHRAIELLLQMKSSG-----LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 333

Query: 637 --KDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              DDY G+         +VD+  +   ++DA ++ + M         W++L+  C
Sbjct: 334 ADSDDYIGVG--------LVDMYAKNHFLDDAMKVFDWMSHR--DLILWNALISGC 379


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/824 (40%), Positives = 498/824 (60%), Gaps = 40/824 (4%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y EM  S I  D   FP +LKA   ++D   G ++H   +K GY +S V VAN++V MY 
Sbjct: 168 YREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGY-VSIVFVANSIVGMYT 226

Query: 125 KCGSDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           KC +D+    ++FDR+ EK D VSWNSMI+     G+   AL  F  M  +++ P+++T 
Sbjct: 227 KC-NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 285

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKS 242
           V+   AC + S    ++ G  +H   L+   + N F+ NAL+AMYA+ G++ +A  +F +
Sbjct: 286 VAALQACEDSSF---IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 342

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            +D D +SWN+++S   QN  + EA+ F  +M   G KPD V++ S++ A +       G
Sbjct: 343 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMY---CNCREVECGRRVFDFISDKKIALWNAMITG 359
            +IHAYA++N +  D   VG++LVDMY   C+ + ++C   +FD + DK +  W  +I G
Sbjct: 403 MQIHAYAMKNGLDSDLQ-VGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAG 458

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN     AL LF +++ + G+  +   +SS++ AC   +     + IH + I+ GL  
Sbjct: 459 HAQNGSHSRALELFREVQ-LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS- 516

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D  +QN ++D+Y   G ++ +  +F+ +E +D VSW +MI+ Y   G   +AL L   M+
Sbjct: 517 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 576

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
               E                 P+SI+L+++L    +LSAL KGKEIH + IR     + 
Sbjct: 577 ETGVE-----------------PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEG 619

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + S LVDMYA+CG L  +R VF+ +  ++++ W  +I AYGMHG G+  ++L + M  E
Sbjct: 620 SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 679

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
                 + P+ + F+A+  ACSHSG+++EG      MK +Y +EP P+HYAC+VDLLGRA
Sbjct: 680 S-----IAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRA 734

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
             +E+AYQ +  M  E   A  W +LLGAC+IH N E+GEIAAQ L  ++P+   +YVL+
Sbjct: 735 NHLEEAYQFVKGMEVE-PTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLV 793

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SN+YS+ + W     VR +MK  G++K PGCSWIE G+++H F+A D SH QS +++  L
Sbjct: 794 SNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKL 853

Query: 780 ENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
             ++E++ KEG YV  T  VLHN  EEEK  +L GHSE+LAIA+G+L TP G ++R+ KN
Sbjct: 854 SQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKN 913

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH   K ISK   RE+++RD  RFHHFK G CSCGD W
Sbjct: 914 LRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 201/680 (29%), Positives = 345/680 (50%), Gaps = 48/680 (7%)

Query: 20  QTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNF- 78
           + HQ P    +  PL   +T        SLR   +     EA  S  ++  ++  P  F 
Sbjct: 25  KIHQNPPLKISKFPLKPVET-------PSLREICKRGSVNEAFQSLTDLF-ANQSPSQFS 76

Query: 79  ---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
              A+ +VL+     + LS G+Q+HAH++      +SV ++  LV MYGKCG  + D  K
Sbjct: 77  LDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGC-LVDAEK 135

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD +  K   +WN+MI      G+   +LE +R M  S +   + T   +  AC  L  
Sbjct: 136 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 195

Query: 196 RDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNT 253
           R   R G +VHG +++ G  +  F+ N+++ MY K   ++ A+ LF    E  D+VSWN+
Sbjct: 196 R---RYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNS 252

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S+ S N + +EA+    +M    + P+  +  + L AC     +  G  IHA  L++ 
Sbjct: 253 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 312

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
             I N FV +AL+ MY    ++     +F  + D     WN+M++G+ QN    EAL  +
Sbjct: 313 YYI-NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M + AG  P+   + S++ A  RS        IH +A+K GL  D  V N+L+DMY++
Sbjct: 372 HEMRD-AGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 430

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              ++    IFD M  +D VSW T+I G+   G H  AL L RE+Q +E         DL
Sbjct: 431 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ-LEG-------IDL 482

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           D          + + ++L  C  L  ++  KEIH+Y IR  L +D+V+ + +VD+Y +CG
Sbjct: 483 D---------VMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECG 532

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +++A R+F+L+  ++V++W  +I  Y  +G   E LEL   M   G     V+P+ ++ 
Sbjct: 533 NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG-----VEPDSISL 587

Query: 614 IALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +++ +A +    + +G ++  + ++  + +E S    + +VD+  R G +E +  + N +
Sbjct: 588 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFI 645

Query: 673 PPEFDKAGAWSSLLGACRIH 692
             +      W+S++ A  +H
Sbjct: 646 RNK--DLVLWTSMINAYGMH 663



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 277/555 (49%), Gaps = 54/555 (9%)

Query: 155 LCRFGKWDLALEAFRMM--LYSNVEPSSFTL----VSVALACSNLSRRDGLRLGRQVHGN 208
           +C+ G  +   EAF+ +  L++N  PS F+L     SV   C +   +  L  G+QVH +
Sbjct: 50  ICKRGSVN---EAFQSLTDLFANQSPSQFSLDEAYSSVLELCGS---KKALSEGQQVHAH 103

Query: 209 SLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            +       + F+   L+ MY K G + DA+ LF     + + +WN ++ +   N + L 
Sbjct: 104 MITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 163

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           ++   R+M + GI  D  +   +L AC  L+    G E+H  A++    +   FV +++V
Sbjct: 164 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEG-YVSIVFVANSIV 222

Query: 327 DMYCNCREVECGRRVFDFISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            MY  C ++   R++FD + +K+ +  WN+MI+ Y  N    EAL LF +M++ A L PN
Sbjct: 223 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-ASLAPN 281

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T  + + AC  S        IH   +K     + +V NAL+ MY+R G++  +  IF 
Sbjct: 282 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 341

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           +M+  DT+SWN+M++G+   G + +AL    EM++  +                 KP+ +
Sbjct: 342 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ-----------------KPDLV 384

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
            +++++           G +IHAYA++N L +D+ VG++LVDMYAK   + +   +FD M
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 444

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P ++V++W  II  +  +G     LEL + +  EG     +  + +   ++  ACS    
Sbjct: 445 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG-----IDLDVMMISSILLACS---- 495

Query: 626 VSEGMDLFYKMKD--DYGIEPSPDHYAC---VVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
              G+ L   +K+   Y I            +VD+ G  G V+ A ++  ++  EF    
Sbjct: 496 ---GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI--EFKDVV 550

Query: 681 AWSSLLGACRIHQNV 695
           +W+S++ +C +H  +
Sbjct: 551 SWTSMI-SCYVHNGL 564


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 331/824 (40%), Positives = 498/824 (60%), Gaps = 40/824 (4%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y EM  S I  D   FP +LKA   ++D   G ++H   +K GY +S V VAN++V MY 
Sbjct: 204 YREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGY-VSIVFVANSIVGMYT 262

Query: 125 KCGSDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           KC +D+    ++FDR+ EK D VSWNSMI+     G+   AL  F  M  +++ P+++T 
Sbjct: 263 KC-NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 321

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKS 242
           V+   AC + S    ++ G  +H   L+   + N F+ NAL+AMYA+ G++ +A  +F +
Sbjct: 322 VAALQACEDSSF---IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYN 378

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            +D D +SWN+++S   QN  + EA+ F  +M   G KPD V++ S++ A +       G
Sbjct: 379 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMY---CNCREVECGRRVFDFISDKKIALWNAMITG 359
            +IHAYA++N +  D   VG++LVDMY   C+ + ++C   +FD + DK +  W  +I G
Sbjct: 439 MQIHAYAMKNGLDSDLQ-VGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAG 494

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN     AL LF +++ + G+  +   +SS++ AC   +     + IH + I+ GL  
Sbjct: 495 HAQNGSHSRALELFREVQ-LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS- 552

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D  +QN ++D+Y   G ++ +  +F+ +E +D VSW +MI+ Y   G   +AL L   M+
Sbjct: 553 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 612

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
               E                 P+SI+L+++L    +LSAL KGKEIH + IR     + 
Sbjct: 613 ETGVE-----------------PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEG 655

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + S LVDMYA+CG L  +R VF+ +  ++++ W  +I AYGMHG G+  ++L + M  E
Sbjct: 656 SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 715

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
                 + P+ + F+A+  ACSHSG+++EG      MK +Y +EP P+HY C+VDLLGRA
Sbjct: 716 S-----IAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRA 770

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
             +E+AYQ +  M  E   A  W +LLGAC+IH N E+GEIAAQ L  ++P+   +YVL+
Sbjct: 771 NHLEEAYQFVKGMEVE-PTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLV 829

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SN+Y++ + W    +VR +MK  G++K PGCSWIE G+++H F+A D SH QS +++  L
Sbjct: 830 SNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKL 889

Query: 780 ENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
             ++E++ KEG YV  T  VLHN  EEEK  +L GHSE+LAIA+G+L TP G ++R+ KN
Sbjct: 890 SQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKN 949

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH   K ISK   RE+++RD  RFHHFK G CSCGD W
Sbjct: 950 LRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 201/680 (29%), Positives = 346/680 (50%), Gaps = 48/680 (7%)

Query: 20  QTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNF- 78
           + HQ P    +  PL   +T        SLR   +     EA  S  ++  ++  P  F 
Sbjct: 61  KIHQNPPLKISKFPLKPVET-------PSLREICKRGSVNEAFQSLTDLF-ANQSPSQFS 112

Query: 79  ---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
              A+ +VL+     + LS G+Q+HAH++      +SV ++  LV MYGKCG  + D  K
Sbjct: 113 LDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGC-LVDAEK 171

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD +  K   +WN+MI      G+   +LE +R M  S +   + T   +  AC  L  
Sbjct: 172 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 231

Query: 196 RDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNT 253
           R   R G +VHG +++ G  +  F+ N+++ MY K   ++ A+ LF    E  D+VSWN+
Sbjct: 232 R---RCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNS 288

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S+ S N + +EA+    +M    + P+  +  + L AC     +  G  IHA  L++ 
Sbjct: 289 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 348

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
             I N FV +AL+ MY    ++     +F  + D     WN+M++G+ QN    EAL  +
Sbjct: 349 YYI-NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M + AG  P+   + S++ A  RS    +   IH +A+K GL  D  V N+L+DMY++
Sbjct: 408 HEMRD-AGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 466

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              ++    IFD M  +D VSW T+I G+   G H  AL L RE+Q +E         DL
Sbjct: 467 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ-LEG-------IDL 518

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           D          + + ++L  C  L  ++  KEIH+Y IR  L +D+V+ + +VD+Y +CG
Sbjct: 519 D---------VMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECG 568

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +++A R+F+L+  ++V++W  +I  Y  +G   E LEL   M   G     V+P+ ++ 
Sbjct: 569 NVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG-----VEPDSISL 623

Query: 614 IALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +++ +A +    + +G ++  + ++  + +E S    + +VD+  R G +E +  + N +
Sbjct: 624 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFI 681

Query: 673 PPEFDKAGAWSSLLGACRIH 692
             +      W+S++ A  +H
Sbjct: 682 RNK--DLVLWTSMINAYGMH 699



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 277/555 (49%), Gaps = 54/555 (9%)

Query: 155 LCRFGKWDLALEAFRMM--LYSNVEPSSFTL----VSVALACSNLSRRDGLRLGRQVHGN 208
           +C+ G  +   EAF+ +  L++N  PS F+L     SV   C +   +  L  G+QVH +
Sbjct: 86  ICKRGSVN---EAFQSLTDLFANQSPSQFSLDEAYSSVLELCGS---KKALSEGQQVHAH 139

Query: 209 SLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            +       + F+   L+ MY K G + DA+ LF     + + +WN ++ +   N + L 
Sbjct: 140 MITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 199

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           ++   R+M + GI  D  +   +L AC  L+    G E+H  A++    +   FV +++V
Sbjct: 200 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEG-YVSIVFVANSIV 258

Query: 327 DMYCNCREVECGRRVFDFISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            MY  C ++   R++FD + +K+ +  WN+MI+ Y  N    EAL LF +M++ A L PN
Sbjct: 259 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-ASLAPN 317

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T  + + AC  S        IH   +K     + +V NAL+ MY+R G++  +  IF 
Sbjct: 318 TYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFY 377

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           +M+  DT+SWN+M++G+   G + +AL    EM++  +                 KP+ +
Sbjct: 378 NMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ-----------------KPDLV 420

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
            +++++           G +IHAYA++N L +D+ VG++LVDMYAK   + +   +FD M
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 480

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P ++V++W  II  +  +G     LEL + +  EG     +  + +   ++  ACS    
Sbjct: 481 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG-----IDLDVMMISSILLACS---- 531

Query: 626 VSEGMDLFYKMKD--DYGIEPSPDHYAC---VVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
              G+ L   +K+   Y I            +VD+ G  G V+ A ++  ++  EF    
Sbjct: 532 ---GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI--EFKDVV 586

Query: 681 AWSSLLGACRIHQNV 695
           +W+S++ +C +H  +
Sbjct: 587 SWTSMI-SCYVHNGL 600


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/865 (38%), Positives = 497/865 (57%), Gaps = 41/865 (4%)

Query: 24  PPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAV 83
           P A  A    +P     C  SW   + + + +   R+A+L++  M    +  + FA P V
Sbjct: 53  PSAARAVFDEIPDP---CHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVV 109

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT-- 141
           LK      D+  G Q+HA  V     +  V VAN LV +YG  G  + +  ++FD     
Sbjct: 110 LKCA---PDVRFGAQVHALAVATRL-VHDVFVANALVAVYGGFGM-VDEARRMFDEYVGV 164

Query: 142 --EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
             E++ VSWN+MI+   +  +   A+  FR M++S   P+ F    V  AC+    RD L
Sbjct: 165 GGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTG--SRD-L 221

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             GRQVHG  +R G E + F  NAL+ MY+KLG ++ A T+F+     D+VSWN  +S  
Sbjct: 222 EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGC 281

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
             +     A+  L QM   G+ P+  +++SVL AC+     + G++IH + ++     D 
Sbjct: 282 VTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDE 341

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-E 377
            FV   LVDMY     ++  R+VFDF+  + + LWNA+I+G   +    E L LF +M +
Sbjct: 342 -FVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRK 400

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E   L  N TT++SV+ +   SEA      +H  A K+GL  D +V N L+D Y + G++
Sbjct: 401 EGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQL 460

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + +  +F +    D +S  TM+T  + C    DA+ L  +M     E             
Sbjct: 461 DYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLE------------- 507

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P+S  L ++L  C +LSA  +GK++HA+ I+    +DV  G+ALV  YAKCG +  
Sbjct: 508 ----PDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIED 563

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A   F  +P R +++W+ +I     HG G+  L+L   M+ EG     V PN +T  ++ 
Sbjct: 564 ADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEG-----VAPNHITLTSVL 618

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +AC+H+G+V +    F  MK+ +GI+ + +HYAC++D+LGRAGK+EDA +L+N MP + +
Sbjct: 619 SACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQAN 678

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
            A  W +LLGA R+H++ E+G +AA+ LF LEP+ +  +VLL+N Y+SA +WD+   VRK
Sbjct: 679 -AAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRK 737

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK+  V+KEP  SW+E  D++H F+ GD SH  +  ++G L  L + M K GYVP+   
Sbjct: 738 LMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEV 797

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
            LH+V+  EKE LL  HSE+LA+AF +++TP G  IRV KNLR+C DCH A K+ISKI S
Sbjct: 798 DLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVS 857

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REII+RD+ RFHHF NGTCSCGDYW
Sbjct: 858 REIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 194/666 (29%), Positives = 329/666 (49%), Gaps = 59/666 (8%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           + L  G  +H+H++K G        +N L+ +Y +C         VFD I +   VSW+S
Sbjct: 18  RSLFAGAHLHSHLLKSGL---LAGFSNHLLTLYSRCRLPS-AARAVFDEIPDPCHVSWSS 73

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           ++      G    AL AFR M    V  + F L  V L C+       +R G QVH  +L
Sbjct: 74  LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFAL-PVVLKCA-----PDVRFGAQVH--AL 125

Query: 211 RVGE---WNTFIMNALMAMYAKLGRVDDAKTLFKSF----EDRDLVSWNTIVSSLSQNDK 263
            V      + F+ NAL+A+Y   G VD+A+ +F  +     +R+ VSWNT++S+  +ND+
Sbjct: 126 AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQ 185

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             +A+   R+M   G +P+    + V+ AC+    L+ G+++H   +R     D  F  +
Sbjct: 186 SGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD-VFTAN 244

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           ALVDMY    ++E    VF+ +    +  WNA I+G   + +D  AL L ++M+  +GL 
Sbjct: 245 ALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKS-SGLV 303

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           PN  T+SSV+ AC  + AF     IHG  +K     D +V   L+DMY++ G ++ ++ +
Sbjct: 304 PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKV 363

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           FD M  RD + WN +I+G +  G+HG+ L L   M        R    DLD        N
Sbjct: 364 FDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM--------RKEGLDLD-------VN 408

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
             TL +VL    +  A+   +++HA A +  L +D  V + L+D Y KCG L++A +VF 
Sbjct: 409 RTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFK 468

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
                ++I+   ++ A      G++ ++L   M+ +G     ++P+     +L  AC+  
Sbjct: 469 ESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG-----LEPDSFVLSSLLNACTSL 523

Query: 624 GMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
               +G  +  + +K  +    + D +A   +V    + G +EDA    + +P       
Sbjct: 524 SAYEQGKQVHAHLIKRQF----TSDVFAGNALVYAYAKCGSIEDADMAFSGLPER--GIV 577

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQLWDKAMDV 735
           +WS+++G    H + +     A +LF  +L+  VA +++ L+++ S+   A L D A   
Sbjct: 578 SWSAMIGGLAQHGHGK----RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY 633

Query: 736 RKKMKE 741
            + MKE
Sbjct: 634 FESMKE 639



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/421 (32%), Positives = 207/421 (49%), Gaps = 29/421 (6%)

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
           +  ALA    SR   L  G  +H + L+ G    F  N L+ +Y++      A+ +F   
Sbjct: 7   IGSALARFGTSR--SLFAGAHLHSHLLKSGLLAGF-SNHLLTLYSRCRLPSAARAVFDEI 63

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            D   VSW+++V++ S N    +A++  R M  RG+  +  ++  VL     +     G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GA 120

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD----FISDKKIALWNAMITG 359
           ++HA A+    L+ + FV +ALV +Y     V+  RR+FD       ++    WN MI+ 
Sbjct: 121 QVHALAVATR-LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y +N+   +A+ +F +M   +G  PN    S VV AC  S        +HG  ++ G  +
Sbjct: 180 YVKNDQSGDAIGVFREMVW-SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D +  NAL+DMYS++G IE++ T+F+ M   D VSWN  I+G    G    AL LL +M 
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM- 297

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                K+   V           PN  TL +VL  C    A   G++IH + ++ +   D 
Sbjct: 298 -----KSSGLV-----------PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDE 341

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            V   LVDMYAK G L+ AR+VFD MP R++I WN +I      G   EVL L   M  E
Sbjct: 342 FVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKE 401

Query: 600 G 600
           G
Sbjct: 402 G 402



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 185/414 (44%), Gaps = 46/414 (11%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +I S L        L  G  +H++ L++ +L   S   + L+ +Y  CR     R VFD 
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFS---NHLLTLYSRCRLPSAARAVFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I D     W++++T Y  N    +AL+ F  M    G+  N   +  VV  C     F  
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRG-RGVPCNEFAL-PVVLKCAPDVRFGA 120

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM----EVRDTVSWNTMIT 460
           +  +H  A+   L  D +V NAL+ +Y   G ++ ++ +FD+       R+ VSWNTMI+
Sbjct: 121 Q--VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y    Q GDA+ + REM    E                 +PN      V+  C     L
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGE-----------------RPNEFGFSCVVNACTGSRDL 221

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+++H   +R     DV   +ALVDMY+K G +  A  VF+ MP  +V++WN  I   
Sbjct: 222 EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGC 281

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYKMK 637
             HG     LELL  M + G     + PN  T  ++  AC+ +G  + G  +     K  
Sbjct: 282 VTHGHDHRALELLLQMKSSG-----LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV 336

Query: 638 DDYGIEPSPDHYACV--VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
            D+      D +  V  VD+  + G ++DA ++ + MP        W++L+  C
Sbjct: 337 ADF------DEFVAVGLVDMYAKHGFLDDARKVFDFMPRR--DLILWNALISGC 382


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 326/791 (41%), Positives = 479/791 (60%), Gaps = 42/791 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QI   ++K G+  +       L++++ K  S + +  +VF+ +  K  V +++M+    +
Sbjct: 62  QILPLIIKNGF-YNEHLFQTKLISLFCKFNS-ITEAARVFEPVEHKLDVLYHTMLKGYAK 119

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSV-ALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                 A+  +  M    V P  +    +  L+  NL     LR GR++HG  +  G + 
Sbjct: 120 NSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLD----LRRGREIHGMVITNGFQS 175

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F M A++ +YAK  +++DA  +F+    RDLVSWNT+V+  +QN     AV  + QM 
Sbjct: 176 NLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQ 235

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCR 333
             G KPD +++ SVLPA + L+ L  G+ IH YA R   + +++   V +A++D Y  C 
Sbjct: 236 EAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVN---VATAMLDTYFKCG 292

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            V   R VF  +S + +  WN MI GY QN   EEA   F+KM +  G+ P   +M   +
Sbjct: 293 SVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLD-EGVEPTNVSMMGAL 351

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC           +H    +  +G D  V N+L+ MYS+  R++I+ ++F +++ +  V
Sbjct: 352 HACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV 411

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WN MI GY   G   +AL L  EMQ+          +D+       KP+S TL++V+  
Sbjct: 412 TWNAMILGYAQNGCVNEALNLFCEMQS----------HDI-------KPDSFTLVSVITA 454

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              LS   + K IH  AIR ++  +V V +AL+D +AKCG +  AR++FDLM  R+VITW
Sbjct: 455 LADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITW 514

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  YG +G G+E L+L   M     + G VKPNE+TF+++ AACSHSG+V EGM  F
Sbjct: 515 NAMIDGYGTNGHGREALDLFNEM-----QNGSVKPNEITFLSVIAACSHSGLVEEGMYYF 569

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRI 691
             MK++YG+EP+ DHY  +VDLLGRAG+++DA++ I  MP  P     GA   +LGACRI
Sbjct: 570 ESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGA---MLGACRI 626

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+NVE+GE  A  LF L+PD   ++VLL+N+Y+SA +WDK   VR  M++ G++K PGCS
Sbjct: 627 HKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCS 686

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            +E  +E+H F +G  +H QS++++ +LE L + M+  GYVPDT+ + H+V E+ KE LL
Sbjct: 687 LVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLL 745

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LAIAFG+LNT  GT I + KNLRVC DCH+ATK+IS +  REII+RD+RRFHHF
Sbjct: 746 SSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHF 805

Query: 872 KNGTCSCGDYW 882
           KNG CSCGDYW
Sbjct: 806 KNGICSCGDYW 816



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/526 (31%), Positives = 268/526 (50%), Gaps = 26/526 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+++  R+A+  Y  M   ++ P  + F  +L+      DL  G++IH  V+  G+
Sbjct: 114 LKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGF 173

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S++     +VN+Y KC   + D YK+F+R+ ++D VSWN+++A   + G    A++  
Sbjct: 174 Q-SNLFAMTAVVNLYAKC-RQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVV 231

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
             M  +  +P S TLVSV  A ++L     LR+GR +HG + R G E+   +  A++  Y
Sbjct: 232 LQMQEAGQKPDSITLVSVLPAVADLK---ALRIGRSIHGYAFRAGFEYMVNVATAMLDTY 288

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
            K G V  A+ +FK    R++VSWNT++   +QN +  EA     +M   G++P  VS+ 
Sbjct: 289 FKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMM 348

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
             L AC++L  L+ G+ +H       I  D S + S L+ MY  C+ V+    VF  +  
Sbjct: 349 GALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNS-LISMYSKCKRVDIAASVFGNLKH 407

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  WNAMI GY QN    EAL LF +M+    + P++ T+ SV+ A          + 
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQS-HDIKPDSFTLVSVITALADLSVTRQAKW 466

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IHG AI+  + ++ +V  AL+D +++ G I+ ++ +FD M+ R  ++WN MI GY   G 
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL L  EMQN                    KPN IT ++V+  C     + +G    
Sbjct: 527 GREALDLFNEMQNGS-----------------VKPNEITFLSVIAACSHSGLVEEGMYYF 569

Query: 528 AYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                N  L   +    A+VD+  + G L+ A +    MPV+  IT
Sbjct: 570 ESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 243/457 (53%), Gaps = 28/457 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++   R A+   ++M  +  +PD+    +VL AVA ++ L +G+ IH + 
Sbjct: 210 SWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYA 269

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G+    V VA  +++ Y KCGS +     VF  ++ ++ VSWN+MI    + G+ + 
Sbjct: 270 FRAGFEY-MVNVATAMLDTYFKCGS-VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMN 221
           A   F  ML   VEP++ +++    AC+NL     L  GR VH   +  ++G ++  +MN
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLG---DLERGRYVHRLLDEKKIG-FDVSVMN 383

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L++MY+K  RVD A ++F + + + +V+WN ++   +QN    EA+    +M    IKP
Sbjct: 384 SLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKP 443

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++ SV+ A + L +    K IH  A+R  ++  N FV +AL+D +  C  ++  R++
Sbjct: 444 DSFTLVSVITALADLSVTRQAKWIHGLAIRT-LMDKNVFVCTALIDTHAKCGAIQTARKL 502

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + ++ +  WNAMI GYG N +  EAL LF +M+    + PN  T  SV+ AC  S  
Sbjct: 503 FDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQN-GSVKPNEITFLSVIAACSHSGL 561

Query: 402 FPDKEGI-HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
              +EG+ +  ++K   G +  + +  A++D+  R GR++ +     DM V+        
Sbjct: 562 V--EEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVK-------- 611

Query: 459 ITGYTICGQHGDALMLLREMQNME-EEKNRNNVYDLD 494
             G T+ G     L   R  +N+E  EK  + ++DLD
Sbjct: 612 -PGITVLGA---MLGACRIHKNVELGEKTADELFDLD 644



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 8/276 (2%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           +  L   G  +R   SW   +   A++ +  EA  ++++M    ++P N +    L A A
Sbjct: 296 SARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACA 355

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVS 147
            + DL  G+ +H  + +   G   V+V N+L++MY KC   D+     VF  +  K  V+
Sbjct: 356 NLGDLERGRYVHRLLDEKKIGF-DVSVMNSLISMYSKCKRVDI--AASVFGNLKHKTVVT 412

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN+MI    + G  + AL  F  M   +++P SFTLVSV  A ++LS     R  + +HG
Sbjct: 413 WNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVT---RQAKWIHG 469

Query: 208 NSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            ++R + + N F+  AL+  +AK G +  A+ LF   ++R +++WN ++     N    E
Sbjct: 470 LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGRE 529

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           A+    +M    +KP+ ++  SV+ ACSH  +++ G
Sbjct: 530 ALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG 565


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 318/849 (37%), Positives = 489/849 (57%), Gaps = 33/849 (3%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++ + REAI     + +  +  ++  +  V++  A  +    GK +H  + + G  +  +
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID-I 91

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            + N+L+N Y K   D+    +VF R+T +D V+W+SMIA          A + F  M  
Sbjct: 92  YLGNSLINFYSKF-EDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR 232
           +N+EP+  T +S+  AC+N S    L  GR++H     +G E +  +  AL+ MY+K G 
Sbjct: 151 ANIEPNRITFLSILKACNNYSI---LEKGRKIHTIVKAMGMETDVAVATALITMYSKCGE 207

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +  A  +F    +R++VSW  I+ + +Q+ K  EA     QM   GI P+ V+  S+L +
Sbjct: 208 ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS 267

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+  E L+ G+ IH++     +  D   V +AL+ MYC C  V+  R +FD +S + +  
Sbjct: 268 CNTPEALNRGRRIHSHISERGLETD-MIVANALITMYCKCNSVQEAREIFDRMSKRDVIS 326

Query: 353 WNAMITGYGQNEYDE-----EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           W+AMI GY Q+ Y +     E   L  +M    G++PN  T  S++ AC    A      
Sbjct: 327 WSAMIAGYAQSGYKDKESIDEVFQLLERMRR-EGVFPNKVTFMSILRACTAHGALEQGRQ 385

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH    K+G   DR +Q A+ +MY++ G I  ++ +F  M  ++ V+W + ++ Y  CG 
Sbjct: 386 IHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGD 445

Query: 468 HGDALMLLREMQNME------------EEKNRNNVYDLDETVLRP--KPNSITLMTVLPG 513
              A  +  EM                +  +   V++L  ++     +P+ +T++T+L  
Sbjct: 446 LSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEA 505

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           CGAL+ L +GK +HA A++  L +D VV ++L+ MY+KCG +  AR VFD M  R+ + W
Sbjct: 506 CGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAW 565

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++  YG HG+G E ++L K M+ E      V PNE+T  A+ +ACS +G+V EG ++F
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKE-----RVSPNEITLTAVISACSRAGLVQEGREIF 620

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             M++D+ + P   HY C+VDLLGRAG++++A + I  MP E D    W +LLGAC+ H 
Sbjct: 621 RMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPD-ISVWHALLGACKSHN 679

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NV++ E AA ++  LEP  AS Y+ LSNIY+ A  WD +  VR+ M + G++K+ G S I
Sbjct: 680 NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E    IH F+A D +H + + +H  LE L++ M++ GY PD   VLH+V++ +KE  LC 
Sbjct: 740 EIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCH 799

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAIA+G+L TP GT IR+ KNLRVC DCH ATKFISKI  REI+ RD  RFH+F N
Sbjct: 800 HSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNN 859

Query: 874 GTCSCGDYW 882
           GTCSCGD+W
Sbjct: 860 GTCSCGDFW 868



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 277/588 (47%), Gaps = 73/588 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + A +N   +A  ++  MT ++I+P+   F ++LKA      L  G++IH  V
Sbjct: 124 TWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIV 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G   + V VA  L+ MY KCG ++    +VF ++TE++ VSW ++I    +  K + 
Sbjct: 184 KAMGME-TDVAVATALITMYSKCG-EISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNA 222
           A E +  ML + + P++ T VS+  +C+     + L  GR++H + S R  E +  + NA
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNT---PEALNRGRRIHSHISERGLETDMIVANA 298

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN-----DKFLEAVMFLRQMALR 277
           L+ MY K   V +A+ +F     RD++SW+ +++  +Q+     +   E    L +M   
Sbjct: 299 LITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRRE 358

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--- 334
           G+ P+ V+  S+L AC+    L+ G++IHA   +    +D S + +A+ +MY  C     
Sbjct: 359 GVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRS-LQTAIFNMYAKCGSIYE 417

Query: 335 -----------------------VECG-----RRVFDFISDKKIALWNAMITGYGQNEYD 366
                                  ++CG      +VF  +  + +  WN MI GY QN   
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDI 477

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
            +   L   M +  G  P+  T+ +++ AC         + +H  A+KLGL  D  V  +
Sbjct: 478 VKVFELLSSM-KAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATS 536

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+ MYS+ G++  ++T+FD M  RDTV+WN M+ GY   GQHGD L  +   + M +E  
Sbjct: 537 LIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY---GQHGDGLEAVDLFKRMLKE-- 591

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG---- 542
                       R  PN ITL  V+  C     + +G+EI       M+  D  +     
Sbjct: 592 ------------RVSPNEITLTAVISACSRAGLVQEGREIF-----RMMQEDFKMTPRKQ 634

Query: 543 --SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
               +VD+  + G L  A      MP   ++  W+ ++ A   H   Q
Sbjct: 635 HYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQ 682



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 206/436 (47%), Gaps = 36/436 (8%)

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L +  +  EA+  L  +  RG+  +  +   V+  C+     + GK +H       + ID
Sbjct: 31  LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             ++G++L++ Y    +V    +VF  ++ + +  W++MI  Y  N +  +A   F +M 
Sbjct: 91  -IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           + A + PN  T  S++ AC           IH     +G+  D  V  AL+ MYS+ G I
Sbjct: 150 D-ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEI 208

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            ++  +F  M  R+ VSW  +I                   Q   + +  N  ++L E +
Sbjct: 209 SVACEVFHKMTERNVVSWTAII-------------------QANAQHRKLNEAFELYEQM 249

Query: 498 LRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           L+    PN++T +++L  C    AL +G+ IH++     L TD++V +AL+ MY KC  +
Sbjct: 250 LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSV 309

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEG-----QEVLELLKNMVAEGSRGGEVKPNE 610
             AR +FD M  R+VI+W+ +I  Y   G        EV +LL+ M  EG     V PN+
Sbjct: 310 QEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREG-----VFPNK 364

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTF+++  AC+  G + +G  +  ++    G E        + ++  + G + +A Q+ +
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFS 423

Query: 671 MMPPEFDKAGAWSSLL 686
            M  +     AW+S L
Sbjct: 424 KMANK--NVVAWTSFL 437


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 328/879 (37%), Positives = 491/879 (55%), Gaps = 103/879 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +        + E I  +  M    ++PD+F FP V KA + +++  +GK ++ ++
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G+  +S  V  ++++M+ KCG  M    + F+ I  KD   WN M++     G++  
Sbjct: 217 LSIGFEGNSC-VKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL+    M  S V+P   T                                WN     A+
Sbjct: 275 ALKCISDMKLSGVKPDQVT--------------------------------WN-----AI 297

Query: 224 MAMYAKLGRVDDAKTLF------KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           ++ YA+ G+ ++A   F      K F+  ++VSW  +++   QN    EA+   R+M L 
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKP-NVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+KP+ ++IAS + AC++L +L  G+EIH Y ++ + L  +  VG++LVD Y  CR VE 
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-------------------- 377
            RR F  I    +  WNAM+ GY      EEA+ L  +M+                    
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476

Query: 378 --------------EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
                            G+ PN TT+S  + AC +       + IHG+ ++  +     V
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL+ MYS    +E++ ++F ++  RD V WN++I+     G+  +AL LLREM     
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM----- 591

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
             N +NV          + N++T+++ LP C  L+AL +GKEIH + IR  L T   + +
Sbjct: 592 --NLSNV----------EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           +L+DMY +CG +  +RR+FDLMP R++++WNV+I  YGMHG G + + L +     G   
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG--- 696

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             +KPN +TF  L +ACSHSG++ EG   F  MK +Y ++P+ + YAC+VDLL RAG+  
Sbjct: 697 --LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN 754

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +  + I  MP E   A  W SLLGACRIH N ++ E AA+ LF LEP  + +YVL++NIY
Sbjct: 755 ETLEFIEKMPFE-PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIY 813

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           S+A  W+ A  +R  MKE GV K PGCSWIE   ++H F+ GD SH   EQ+   +E+L 
Sbjct: 814 SAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLY 873

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
             +++ GYVPDT+ VL +V+E+EKE  LCGHSEK+A+AFG+++T  GT +R+ KNLRVC 
Sbjct: 874 FDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCG 933

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH ATKFISK+E R+II+RD  RFHHF +G CSCGDYW
Sbjct: 934 DCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 179/632 (28%), Positives = 303/632 (47%), Gaps = 65/632 (10%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +LS +++T  D   + +A  ++L+    + +L LG Q+HA +V  G  +    + + L+ 
Sbjct: 76  LLSSMDLTNPDECIEIYA--SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF-LGSRLLE 132

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           +Y + G  + D  ++FD+++E++  SW +++   C  G ++  ++ F +M+   V P  F
Sbjct: 133 VYCQTGC-VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHF 191

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
               V  ACS L      R+G+ V+   L +G E N+ +  +++ M+ K GR+D A+  F
Sbjct: 192 VFPKVFKACSELKN---YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +  E +D+  WN +VS  +   +F +A+  +  M L G+KPD V+  +++   +     +
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
              E   Y L    L D                                +  W A+I G 
Sbjct: 309 ---EASKYFLEMGGLKD----------------------------FKPNVVSWTALIAGS 337

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGR 419
            QN YD EAL +F KM  + G+ PN+ T++S V AC           IHG+ IK+  L  
Sbjct: 338 EQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM- 478
           D  V N+L+D Y++   +E+++  F  ++  D VSWN M+ GY + G H +A+ LL EM 
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456

Query: 479 -QNMEEEKNRNN-------VYDLDETVLR---------PKPNSITLMTVLPGCGALSALA 521
            Q +E +    N        Y   +  L            PN+ T+   L  CG +  L 
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GKEIH Y +RN +     VGSAL+ MY+ C  L  A  VF  +  R+V+ WN II A  
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G     L+LL+ M         V+ N VT ++   ACS    + +G ++ ++     G
Sbjct: 577 QSGRSVNALDLLREM-----NLSNVEVNTVTMVSALPACSKLAALRQGKEI-HQFIIRCG 630

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           ++        ++D+ GR G ++ + ++ ++MP
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 268/586 (45%), Gaps = 101/586 (17%)

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDG-VSI-ASVLPACSHLEMLDTGKEIHAYALRNDI 314
           S+ +N     A M L  M L    PD  + I AS+L  C  L  L  G ++HA  + N +
Sbjct: 63  SVHRNGVLNNAAMLLSSMDL--TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV 120

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY-GQNEYDEEALMLF 373
            +   F+GS L+++YC    VE  RR+FD +S++ +  W A++  Y G  +Y+E   + +
Sbjct: 121 DV-CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFY 179

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           + + E  G+ P+      V  AC   + +   + ++ + + +G   +  V+ +++DM+ +
Sbjct: 180 LMVNE--GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIK 237

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ-------------- 479
            GR++I++  F+++E +D   WN M++GYT  G+   AL  + +M+              
Sbjct: 238 CGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAI 297

Query: 480 --------NMEEEK-------------------------NRNNVYDLDE-TVLRP----- 500
                     EE                           +  N YD +  +V R      
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 501 -KPNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFA 558
            KPNSIT+ + +  C  LS L  G+EIH Y I+   L +D++VG++LVD YAKC  +  A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           RR F ++   ++++WN ++  Y + G  +E +ELL  M  +G     ++P+ +T+  L  
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-----IEPDIITWNGLVT 472

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA-----GKVEDAYQLINMMP 673
             +  G     ++ F +M    G++P+    +  +   G+      GK    Y L N + 
Sbjct: 473 GFTQYGDGKAALEFFQRMH-SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIE 531

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQLWDK 731
                  A  S+   C    ++E+    A ++F  L   DV    V+ ++I S+     +
Sbjct: 532 LSTGVGSALISMYSGC---DSLEV----ACSVFSELSTRDV----VVWNSIISACAQSGR 580

Query: 732 AMDVRKKMKEMG-----------VRKEPGCS---WIEFGDEIHKFL 763
           +++    ++EM            V   P CS    +  G EIH+F+
Sbjct: 581 SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/837 (36%), Positives = 495/837 (59%), Gaps = 32/837 (3%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           + +M  + ++ +     ++L   + +QDL  GK+IH  VV++G  +  V V++  VN Y 
Sbjct: 129 FRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGM-VEDVFVSSAFVNFYA 187

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           KC   + +   VFD +  +D V+WNS+ +     G     L  FR M+   V+P   T+ 
Sbjct: 188 KCLC-VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVS 246

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            +  ACS+L     L+ G+ +HG +L+ G   N F+ NAL+ +Y     V +A+ +F   
Sbjct: 247 CILSACSDLQ---DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLM 303

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             R++++WN++ S         + +   R+M L G+KPD ++++S+LPACS L+ L +GK
Sbjct: 304 PHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGK 363

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
            IH +A+++  ++++ FV +ALV++Y NC  V   + VFD +  + +  WN++ + Y   
Sbjct: 364 TIHGFAVKHG-MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNC 422

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            + ++ L +F +M  + G+ P+  TM S++ AC   +     + IHG A++ G+  D +V
Sbjct: 423 GFPQKGLNVFREMV-LNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFV 481

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NAL+ +Y++   +  ++ +FD +  R+  SWN ++T Y    ++   L +  +M   E 
Sbjct: 482 CNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEV 541

Query: 484 EKN------------RNNVYDLDETVLRP------KPNSITLMTVLPGCGALSALAKGKE 525
           + +            +N+  +    + R       KP+  T+ ++L  C     L  GKE
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE 601

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH Y  R+    D+   +ALVDMYAKCG L+ +R VFD+MP+++V +WN +I A GMHG 
Sbjct: 602 IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGN 661

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G+E L L + M+        VKP+  TF  + +ACSHS +V EG+ +F  M  D+ +EP 
Sbjct: 662 GKEALSLFEKMLLS-----MVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPE 716

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY CVVD+  RAG +E+AY  I  MP E   A AW + L  CR+++NVE+ +I+A+ L
Sbjct: 717 AEHYTCVVDIYSRAGCLEEAYGFIQRMPME-PTAIAWKAFLAGCRVYKNVELAKISAKKL 775

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F ++P+ +++YV L NI  +A+LW +A  +RK MKE G+ K PGCSW   G+ +H F+AG
Sbjct: 776 FEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAG 835

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D S+ +S++++ FL+ L  +++  GY PDT  VLH++++EEK   LC HSEKLA+AFGIL
Sbjct: 836 DKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGIL 895

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           N    +TIRV KNLR+C DCH A K++S +    I++RD  RFHHFKNG CSC D+W
Sbjct: 896 NLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 213/718 (29%), Positives = 364/718 (50%), Gaps = 77/718 (10%)

Query: 48  SLRSEARSNQF-------REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           S++++ +S  F        EAI  Y       I+PD   F AV KA A  +D    KQ H
Sbjct: 4   SIKNKKKSPSFGIPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFH 63

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
               + G  +S V++ N  ++ YGKC   +    +VFD +  +D V+WNS+ A     G 
Sbjct: 64  DDATRCGV-MSDVSIGNAFIHAYGKCKC-VEGARRVFDDLVARDVVTWNSLSACYVNCGF 121

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFI 219
               L  FR M  + V+ +  T+ S+   CS+L     L+ G+++HG  +R G   + F+
Sbjct: 122 PQQGLNVFRKMGLNKVKANPLTVSSILPGCSDL---QDLKSGKEIHGFVVRHGMVEDVFV 178

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            +A +  YAK   V +A+T+F     RD+V+WN++ S         + +   R+M L G+
Sbjct: 179 SSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV 238

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KPD V+++ +L ACS L+ L +GK IH +AL++  +++N FV +ALV++Y +C  V   +
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHG-MVENVFVSNALVNLYESCLCVREAQ 297

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD +  + +  WN++ + Y    + ++ L +F +M  + G+ P+   MSS++PAC + 
Sbjct: 298 AVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREM-GLNGVKPDPMAMSSILPACSQL 356

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           +     + IHG A+K G+  D +V  AL+++Y+    +  ++T+FD M  R+ V+WN++ 
Sbjct: 357 KDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLS 416

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           + Y  CG     L + REM         N V          KP+ +T++++L  C  L  
Sbjct: 417 SCYVNCGFPQKGLNVFREMV-------LNGV----------KPDLVTMLSILHACSDLQD 459

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GK IH +A+R+ +  DV V +AL+ +YAKC C+  A+ VFDL+P R V +WN I+ A
Sbjct: 460 LKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTA 519

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           Y  + E ++ L +   M  +     EVK +E+T+  +   C  +  + E M++F KM+  
Sbjct: 520 YFTNKEYEKGLYMFSQMNRD-----EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ-T 573

Query: 640 YGIEPSPDHY-----AC------------------------------VVDLLGRAGKVED 664
            G +P          AC                              +VD+  + G +  
Sbjct: 574 MGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSL 633

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVE--IGEIAAQNLFLLEPDVASHYVLLS 720
           +  + +MMP       +W++++ A  +H N +  +       L +++PD A+   +LS
Sbjct: 634 SRNVFDMMP--IKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLS 689



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 173/609 (28%), Positives = 314/609 (51%), Gaps = 59/609 (9%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVD 234
           ++P     ++VA AC+  + RD L++ +Q H ++ R G   +  I NA +  Y K   V+
Sbjct: 36  IKPDKPVFMAVAKACA--ASRDALKV-KQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVE 92

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+ +F     RD+V+WN++ +         + +   R+M L  +K + ++++S+LP CS
Sbjct: 93  GARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCS 152

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            L+ L +GKEIH + +R+  ++++ FV SA V+ Y  C  V   + VFD +  + +  WN
Sbjct: 153 DLQDLKSGKEIHGFVVRHG-MVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWN 211

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           ++ + Y    + ++ L +F +M  + G+ P+  T+S ++ AC   +     + IHG A+K
Sbjct: 212 SLSSCYVNCGFPQKGLNVFREM-VLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            G+  + +V NAL+++Y     +  ++ +FD M  R+ ++WN++ + Y  CG     L +
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
            REM         N V          KP+ + + ++LP C  L  L  GK IH +A+++ 
Sbjct: 331 FREM-------GLNGV----------KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           +  DV V +ALV++YA C C+  A+ VFDLMP RNV+TWN +   Y   G  Q+ L + +
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
            MV  G     VKP+ VT +++  ACS      SG V  G  + + M +D         +
Sbjct: 434 EMVLNG-----VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV--------F 480

Query: 650 AC--VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG--EIAAQNL 705
            C  ++ L  +   V +A  + +++P    +  +W+ +L A   ++  E G    +  N 
Sbjct: 481 VCNALLSLYAKCVCVREAQVVFDLIPHR--EVASWNGILTAYFTNKEYEKGLYMFSQMNR 538

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP--------GCSWIE--- 754
             ++ D  +  V++     ++++ ++AM++ +KM+ MG + +          CS  E   
Sbjct: 539 DEVKADEITWSVVIGGCVKNSRI-EEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLR 597

Query: 755 FGDEIHKFL 763
            G EIH ++
Sbjct: 598 MGKEIHCYV 606



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++++  EA+  + +M     +PD     ++L+A +  + L +GK+IH +V
Sbjct: 547 TWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYV 606

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            ++ +    +   N LV+MY KCG  +     VFD +  KD  SWN+MI      G    
Sbjct: 607 FRH-WKDWDLARTNALVDMYAKCGG-LSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKE 664

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL  F  ML S V+P S T   V  ACS+
Sbjct: 665 ALSLFEKMLLSMVKPDSATFTCVLSACSH 693


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 328/810 (40%), Positives = 488/810 (60%), Gaps = 34/810 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D+F FP VLKA   ++D+  G +IH  ++K GY  S V VAN+LV+MY KC +D+    K
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYD-SIVFVANSLVSMYAKC-NDILGARK 66

Query: 136 VFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +FDR+ E+ D VSWNS+I+     G+   AL  FR M  + V  +++TLV+   AC + S
Sbjct: 67  LFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSS 126

Query: 195 RRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            +   +LG ++H   L+  +  + ++ NAL+AM+ + G++  A  +F   +++D ++WN+
Sbjct: 127 FK---KLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++  +QN  + EA+ F   +    +KPD VS+ S+L A   L  L  GKEIHAYA++N 
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN- 242

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            L  N  +G+ L+DMY  C  V     VFD + +K +  W  +I  Y QN    EAL L 
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            K++   G+  +   + S + AC         + +HG+ +K GL  D  +QN ++D+Y+ 
Sbjct: 303 RKVQ-TKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYAD 360

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G I  +  +F+ ++ +D VSW +MI+ Y   G   +AL +   M+    E         
Sbjct: 361 CGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE--------- 411

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                   P+SITL+++L    +LSAL KGKEIH +  R     +    ++LVDMYA CG
Sbjct: 412 --------PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCG 463

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            L  A +VF     ++++ W  +I AYGMHG G+  +EL   M  +     ++ P+ +TF
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ-----KLIPDHITF 518

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +AL  ACSHSG+++EG  L   MK  Y +EP P+HYAC+VDLLGRA  +E+AY  +  M 
Sbjct: 519 LALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQ 578

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            E   A  W + LGACRIH N ++GEIAAQ L  L+PD    YVL+SN+++++  W    
Sbjct: 579 IE-PTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVE 637

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YV 792
           +VR +MK  G++K PGCSWIE G+++H FL  D SH +S +++  L  ++E++ KEG YV
Sbjct: 638 EVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYV 697

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           P T  VLHNV +EEK  +L GHSE+LAIA+G+++T  GT IR+ KNLRVC DCH   K +
Sbjct: 698 PQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLV 757

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SK   RE+I+RD  RFHHF++G CSCGD+W
Sbjct: 758 SKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 246/490 (50%), Gaps = 38/490 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + + Q  EA+  + EM ++ +  + +   A L+A        LG +IHA +
Sbjct: 79  SWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAI 138

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K    L  V VAN LV M+ + G  M    ++FD + EKD ++WNSMIA   + G ++ 
Sbjct: 139 LKSNQVL-DVYVANALVAMHVRFGK-MSYAARIFDELDEKDNITWNSMIAGFTQNGLYNE 196

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL-GRQVHGNSLRVGEW---NTFI 219
           AL+ F  +  +N++P   +L+S+  A    S R G  L G+++H  +++   W   N  I
Sbjct: 197 ALQFFCGLQDANLKPDEVSLISILAA----SGRLGYLLNGKEIHAYAMK--NWLDSNLRI 250

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N L+ MY+K   V  A  +F    ++DL+SW T++++ +QN+   EA+  LR++  +G+
Sbjct: 251 GNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGM 310

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALR---NDILIDNSFVGSALVDMYCNCREVE 336
             D + I S L ACS L  L   KE+H Y L+   +D+++ N      ++D+Y +C  + 
Sbjct: 311 DVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQN-----MIIDVYADCGNIN 365

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              R+F+ I  K +  W +MI+ Y  N    EAL +F  M+E + + P++ T+ S++ A 
Sbjct: 366 YATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETS-VEPDSITLVSILSAA 424

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    + IHG   + G   +    N+L+DMY+  G +E +  +F     +  V W 
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWT 484

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           TMI  Y   G HG     +     ME++K                P+ IT + +L  C  
Sbjct: 485 TMINAY---GMHGRGKAAVELFSIMEDQK--------------LIPDHITFLALLYACSH 527

Query: 517 LSALAKGKEI 526
              + +GK +
Sbjct: 528 SGLINEGKRL 537



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 182/330 (55%), Gaps = 24/330 (7%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCN 331
           M + G+  D  +   VL AC  +E +  G EIH   ++   D ++   FV ++LV MY  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIV---FVANSLVSMYAK 57

Query: 332 CREVECGRRVFDFISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
           C ++   R++FD ++++  +  WN++I+ Y  N    EAL LF +M++ AG+  N  T+ 
Sbjct: 58  CNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQK-AGVGANTYTLV 116

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           + + AC  S        IH   +K     D YV NAL+ M+ R G++  +  IFD+++ +
Sbjct: 117 AALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEK 176

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D ++WN+MI G+T  G + +AL     +Q+                    KP+ ++L+++
Sbjct: 177 DNITWNSMIAGFTQNGLYNEALQFFCGLQDAN-----------------LKPDEVSLISI 219

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L   G L  L  GKEIHAYA++N L +++ +G+ L+DMY+KC C+ +A  VFD M  +++
Sbjct: 220 LAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDL 279

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           I+W  +I AY  +    E L+LL+ +  +G
Sbjct: 280 ISWTTVIAAYAQNNCHTEALKLLRKVQTKG 309



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 24/262 (9%)

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           V G+  ++ T   V+ AC   E       IHG  IK G     +V N+L+ MY++   I 
Sbjct: 3   VLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDIL 62

Query: 439 ISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            ++ +FD M  R D VSWN++I+ Y++ GQ  +AL L REMQ                  
Sbjct: 63  GARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAG--------------- 107

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
                N+ TL+  L  C   S    G EIHA  +++    DV V +ALV M+ + G +++
Sbjct: 108 --VGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSY 165

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A R+FD +  ++ ITWN +I  +  +G   E L+        G +   +KP+EV+ I++ 
Sbjct: 166 AARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFC-----GLQDANLKPDEVSLISIL 220

Query: 618 AACSHSGMVSEGMDLF-YKMKD 638
           AA    G +  G ++  Y MK+
Sbjct: 221 AASGRLGYLLNGKEIHAYAMKN 242



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 4/155 (2%)

Query: 40  RCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +CK+  SW   +     +    EA+  +  M  + ++PD+    ++L A A +  L+ GK
Sbjct: 375 KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGK 434

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IH  + + G+ L   TV N+LV+MY  CGS + + YKVF     K  V W +MI     
Sbjct: 435 EIHGFIFRKGFMLEGSTV-NSLVDMYACCGS-LENAYKVFICTRSKSLVLWTTMINAYGM 492

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            G+   A+E F +M    + P   T +++  ACS+
Sbjct: 493 HGRGKAAVELFSIMEDQKLIPDHITFLALLYACSH 527


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/809 (38%), Positives = 479/809 (59%), Gaps = 35/809 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           + FA P VLK V    D  LG Q+HA  +  G+G S V VAN LV MYG  G  M D  +
Sbjct: 9   NEFALPVVLKCV---PDAQLGAQVHAMAMATGFG-SDVFVANALVAMYGGFGF-MDDARR 63

Query: 136 VFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           VFD   +E++ VSWN +++   +  +   A++ F  M++S ++P+ F    V  AC+   
Sbjct: 64  VFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 123

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
             D    GRQVH   +R+G E + F  NAL+ MY K+GRVD A  +F+   D D+VSWN 
Sbjct: 124 NIDA---GRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNA 180

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S    N     A+  L QM   G+ P+   ++S+L AC+     D G++IH + ++ +
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 240

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D+ ++G  LVDMY     ++   +VFD++S + + LWNA+I+G       +EA  +F
Sbjct: 241 ADSDD-YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIF 299

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             + +  GL  N TT+++V+ +    EA      +H  A K+G   D +V N L+D Y +
Sbjct: 300 YGLRK-EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWK 358

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              +  +  +F++    D ++  +MIT  + C     A+ L  EM     E         
Sbjct: 359 CSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE--------- 409

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                   P+   L ++L  C +LSA  +GK++HA+ I+    +D   G+ALV  YAKCG
Sbjct: 410 --------PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 461

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  A   F  +P R V++W+ +I     HG G+  LEL   MV EG     + PN +T 
Sbjct: 462 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG-----INPNHITM 516

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            ++  AC+H+G+V E    F  MK+ +GI+ + +HY+C++DLLGRAGK++DA +L+N MP
Sbjct: 517 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            + + A  W +LLGA R+H++ E+G++AA+ LF+LEP+ +  +VLL+N Y+S+ +W++  
Sbjct: 577 FQAN-ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVA 635

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VRK MK+  ++KEP  SW+E  D++H F+ GD SH  +++++  L+ L + M K GY+P
Sbjct: 636 KVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIP 695

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           +    LH+++  EKE LL  HSE+LA+AF +L+TPPG  IRV KNLR+C DCH A KFIS
Sbjct: 696 NVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFIS 755

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
            I SREII+RD+ RFHHF++GTCSCGDYW
Sbjct: 756 NIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 265/545 (48%), Gaps = 31/545 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +++Q  +AI  + EM  S IQP  F F  V+ A  G +++  G+Q+HA V
Sbjct: 76  SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 135

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+ GY    V  AN LV+MY K G  D+  V  +F+++ + D VSWN++I+     G   
Sbjct: 136 VRMGYE-KDVFTANALVDMYVKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDH 192

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV-GEWNTFIMN 221
            A+E    M  S + P+ F L S+  AC+     D   LGRQ+HG  ++   + + +I  
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD---LGRQIHGFMIKANADSDDYIGV 249

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+ MYAK   +DDA  +F     RDL+ WN ++S  S   +  EA      +   G+  
Sbjct: 250 GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV 309

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  ++A+VL + + LE     +++HA A +   + D   V + L+D Y  C  +    RV
Sbjct: 310 NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV-NGLIDSYWKCSCLSDAIRV 368

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+  S   I    +MIT   Q ++ E A+ LF++M    GL P+   +SS++ AC    A
Sbjct: 369 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSA 427

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           +   + +H H IK     D +  NAL+  Y++ G IE ++  F  +  R  VSW+ MI G
Sbjct: 428 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 487

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G    AL L   M              +DE +    PN IT+ +VL  C     + 
Sbjct: 488 LAQHGHGKRALELFGRM--------------VDEGI---NPNHITMTSVLCACNHAGLVD 530

Query: 522 KGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
           + K  +  +++ M   D      S ++D+  + G L+ A  + + MP + N   W  ++ 
Sbjct: 531 EAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589

Query: 579 AYGMH 583
           A  +H
Sbjct: 590 ASRVH 594


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/767 (41%), Positives = 467/767 (60%), Gaps = 35/767 (4%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+++ + GS + +  +VF+ I  K  V +++M+    +    D AL+ F  M Y +VEP
Sbjct: 75  LVSLFCRYGS-VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             +    +   C + +    LR+G+++HG  ++ G   + F M  L  MYAK  +V++A+
Sbjct: 134 VVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F    +RDLVSWNTIV+  SQN     A+  ++ M    +KP  ++I SVLPA S L 
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 298 MLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           ++  GKEIH YA+R+  D L++   + +ALVDMY  C  +E  R++FD + ++ +  WN+
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVN---ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MI  Y QNE  +EA+++F KM +  G+ P   ++   + AC           IH  +++L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL R+  V N+L+ MY +   ++ + ++F  ++ R  VSWN MI G+   G+  DAL   
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +M++               TV   KP++ T ++V+     LS     K IH   +R+ L
Sbjct: 427 SQMRS--------------RTV---KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V V +ALVDMYAKCG +  AR +FD+M  R+V TWN +I  YG HG G+  LEL + 
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M     + G +KPN VTF+++ +ACSHSG+V  G+  FY MK++Y IE S DHY  +VDL
Sbjct: 530 M-----QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG++ +A+  I  MP +      + ++LGAC+IH+NV   E AA+ LF L PD   +
Sbjct: 585 LGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           +VLL+NIY +A +W+K   VR  M   G+RK PGCS +E  +E+H F +G  +H  S+++
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           + FLE L   +++ GYVPDT+ VL  V  + KE LL  HSEKLAI+FG+LNT  GTTI V
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 762

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC DCH ATK+IS +  REI++RD++RFHHFKNG CSCGDYW
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 274/526 (52%), Gaps = 28/526 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+ +   +A+  ++ M   D++P  + F  +LK      +L +GK+IH  +VK G+
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L    +   L NMY KC   + +  KVFDR+ E+D VSWN+++A   + G   +ALE  
Sbjct: 167 SLDLFAMTG-LENMYAKC-RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
           + M   N++PS  T+VSV  A S L     + +G+++HG ++R G +    I  AL+ MY
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRL---ISVGKEIHGYAMRSGFDSLVNISTALVDMY 281

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK G ++ A+ LF    +R++VSWN+++ +  QN+   EA++  ++M   G+KP  VS+ 
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
             L AC+ L  L+ G+ IH  ++   +  + S V S L+ MYC C+EV+    +F  +  
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS-LISMYCKCKEVDTAASMFGKLQS 400

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  WNAMI G+ QN    +AL  F +M     + P+  T  SV+ A          + 
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKW 459

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IHG  ++  L ++ +V  AL+DMY++ G I I++ IFD M  R   +WN MI GY   G 
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              AL L  EMQ                T+   KPN +T ++V+  C   S L +     
Sbjct: 520 GKAALELFEEMQK--------------GTI---KPNGVTFLSVISACSH-SGLVEAGLKC 561

Query: 528 AYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVI 571
            Y ++   + ++ +    A+VD+  + G LN A      MPV+  +
Sbjct: 562 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 222/415 (53%), Gaps = 13/415 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++   R A+     M   +++P      +VL AV+ ++ +S+GK+IH + 
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  S V ++  LV+MY KCGS +    ++FD + E++ VSWNSMI    +      
Sbjct: 263 MRSGFD-SLVNISTALVDMYAKCGS-LETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F+ ML   V+P+  +++    AC++L     L  GR +H  S+ +G + N  ++N+
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLG---DLERGRFIHKLSVELGLDRNVSVVNS 377

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY K   VD A ++F   + R LVSWN ++   +QN + ++A+ +  QM  R +KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SV+ A + L +    K IH   +R+  L  N FV +ALVDMY  C  +   R +F
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS--- 399
           D +S++ +  WNAMI GYG + + + AL LF +M++   + PN  T  SV+ AC  S   
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHSGLV 555

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           EA      +      + L  D Y   A++D+  R GR+  +      M V+  V+
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 212/430 (49%), Gaps = 25/430 (5%)

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L R   L+  RQ+     + G +   F    L++++ + G VD+A  +F+  + +  V +
Sbjct: 44  LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           +T++   ++     +A+ F  +M    ++P   +   +L  C     L  GKEIH   ++
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +   +D  F  + L +MY  CR+V   R+VFD + ++ +  WN ++ GY QN     AL 
Sbjct: 164 SGFSLD-LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +   M E   L P+  T+ SV+PA          + IHG+A++ G      +  AL+DMY
Sbjct: 223 MVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G +E ++ +FD M  R+ VSWN+MI  Y       +A+++ ++M             
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM------------- 328

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            LDE V   KP  +++M  L  C  L  L +G+ IH  ++   L  +V V ++L+ MY K
Sbjct: 329 -LDEGV---KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           C  ++ A  +F  +  R +++WN +I+ +  +G   + L     M     R   VKP+  
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-----RSRTVKPDTF 439

Query: 612 TFIALFAACS 621
           T++++  A +
Sbjct: 440 TYVSVITAIA 449



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 195/379 (51%), Gaps = 28/379 (7%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           A +L  CS L+ L   ++I     +N  L    F  + LV ++C    V+   RVF+ I 
Sbjct: 41  ALLLERCSSLKEL---RQILPLVFKNG-LYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K   L++ M+ G+ +    ++AL  F++M     + P     + ++  C         +
Sbjct: 97  SKLNVLYHTMLKGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGK 155

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IHG  +K G   D +    L +MY++  ++  ++ +FD M  RD VSWNT++ GY+   
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS--- 212

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q+G A M L  +++M EE                KP+ IT+++VLP   AL  ++ GKEI
Sbjct: 213 QNGMARMALEMVKSMCEEN--------------LKPSFITIVSVLPAVSALRLISVGKEI 258

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H YA+R+   + V + +ALVDMYAKCG L  AR++FD M  RNV++WN +I AY  +   
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +E + + + M+ EG     VKP +V+ +    AC+  G +  G    +K+  + G++ + 
Sbjct: 319 KEAMLIFQKMLDEG-----VKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNV 372

Query: 647 DHYACVVDLLGRAGKVEDA 665
                ++ +  +  +V+ A
Sbjct: 373 SVVNSLISMYCKCKEVDTA 391



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 2/155 (1%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q+R   SW   +   A++ +  +A+  + +M    ++PD F + +V+ A+A +      K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IH  V++      +V V   LV+MY KCG+ M     +FD ++E+   +WN+MI     
Sbjct: 459 WIHGVVMRSCLD-KNVFVTTALVDMYAKCGAIMI-ARLIFDMMSERHVTTWNAMIDGYGT 516

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            G    ALE F  M    ++P+  T +SV  ACS+
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 333/853 (39%), Positives = 487/853 (57%), Gaps = 37/853 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSD----IQPDNFAFPAVLKAVAGIQ 91
           G   R   SW   + +   S    EA+  Y  M  S+      PD     +VLKA     
Sbjct: 118 GMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEG 177

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNS 150
           D   G ++H   VK G   S++ VAN LV MY KCG  +    +VF+ + + +D  SWNS
Sbjct: 178 DGRCGSEVHGLAVKSGLDRSTL-VANALVGMYAKCGL-LDSALRVFEWMRDGRDVASWNS 235

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
            I+   + G +  AL+ FR M       +S+T V V   C+ L++   L  GR++H   L
Sbjct: 236 AISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQ---LNHGRELHAALL 292

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           + G       NAL+ MYA+ G VD A  +F+   D+D +SWN+++S   QN  + EA+ F
Sbjct: 293 KCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDF 352

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M   G  PD   I S+L A  HL  L  G+E+HAYA++  +  D   + + L+DMY 
Sbjct: 353 FGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQ-IANTLMDMYI 411

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  VEC  RVFD +  K    W  +I  Y Q+    EA+  F +  +  G+  +   M 
Sbjct: 412 KCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKF-RTAQKEGIKVDPMMMG 470

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++ AC   ++    + +H +AI+ GL  D  ++N ++D+Y   G +  +  IF+ ++ +
Sbjct: 471 SILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKK 529

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V+W +M+  +   G   +A+ L  +M N                    +P+S+ L+ +
Sbjct: 530 DIVTWTSMVNCFAENGLLHEAVALFGKMLNAG-----------------IQPDSVALVGI 572

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L     LS+L KGKEIH + IR     +  V S+LVDMY+ CG +N+A +VFD    ++V
Sbjct: 573 LGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDV 632

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + W  +I A GMHG G++ + + K M+  G     V P+ V+F+AL  ACSHS +V EG 
Sbjct: 633 VLWTAMINATGMHGHGKQAIYIFKRMLETG-----VSPDHVSFLALLYACSHSKLVDEGK 687

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
                M   Y ++P  +HYACVVDLLGR+G+ E+AY+ I  MP E  K+  W +LLGACR
Sbjct: 688 FYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLE-PKSVVWCALLGACR 746

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH+N E+  IA   L  LEPD   +YVL+SN+++    W+   ++R KM E G+RK+P C
Sbjct: 747 IHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPAC 806

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKET 809
           SWIE G+ +H F A D SH+ S+ +H  L  ++E++R+EG YV DTS VLH+V+EEEK  
Sbjct: 807 SWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKID 866

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           LL  HSE+LAI+FG+++T  GT +R+AKNLRVC DCH+ TK +SK+  REI++RD  RFH
Sbjct: 867 LLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFH 926

Query: 870 HFKNGTCSCGDYW 882
           HF  GTCSCGD+W
Sbjct: 927 HFSGGTCSCGDFW 939



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 220/799 (27%), Positives = 383/799 (47%), Gaps = 87/799 (10%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFRE 60
           MA++A  L   P+P     +   PPA+   SL     +  CK+     LR   R    R 
Sbjct: 1   MATTAA-LPFHPTP-----RRKLPPASAGASL-----RQLCKDG---DLREALRQLAARS 46

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY--GLSSVTVANT 118
           A        R    P    +  VL  VA  + +S G+Q+HAH V  G      +  +A  
Sbjct: 47  A--------RGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATK 98

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS---- 174
           L+ MYGKCG  + D +++FD +  +   SWN++I      G    A+  +R M  S    
Sbjct: 99  LLFMYGKCGR-LPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVA 157

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
              P   TL SV  AC   +  DG R G +VHG +++ G + +T + NAL+ MYAK G +
Sbjct: 158 GAAPDGCTLASVLKACG--AEGDG-RCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLL 214

Query: 234 DDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           D A  +F+   D RD+ SWN+ +S   QN  FLEA+   R+M   G   +  +   VL  
Sbjct: 215 DSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQV 274

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L  L+ G+E+HA  L+     + +   +AL+ MY  C  V+   RVF  I DK    
Sbjct: 275 CAELAQLNHGRELHAALLKCG--TEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYIS 332

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN+M++ Y QN    EA+  F +M +  G  P+   + S++ A        +   +H +A
Sbjct: 333 WNSMLSCYVQNRLYAEAIDFFGEMVQ-NGFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           +K  L  D  + N LMDMY +   +E S  +FD M ++D VSW T+I  Y    ++ +A+
Sbjct: 392 VKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAI 451

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
              R  Q               E +   K + + + ++L  C  L +++  K++H+YAIR
Sbjct: 452 GKFRTAQK--------------EGI---KVDPMMMGSILEACSGLKSISLLKQVHSYAIR 494

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           N L  D+++ + ++D+Y +CG + +A  +F+++  ++++TW  ++  +  +G   E + L
Sbjct: 495 NGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVAL 553

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC 651
              M+  G     ++P+ V  + +  A +    +++G ++  + ++  + +E +    + 
Sbjct: 554 FGKMLNAG-----IQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSS 606

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGA-----WSSLLGACRIHQNVEIGEIAAQNLF 706
           +VD+    G +  A ++       FD+A       W++++ A  +H + +     A  +F
Sbjct: 607 LVDMYSGCGSMNYALKV-------FDEAKCKDVVLWTAMINATGMHGHGK----QAIYIF 655

Query: 707 --LLEPDVA-SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
             +LE  V+  H   L+ +Y+ +    K +D  K   +M V K     W E    +   L
Sbjct: 656 KRMLETGVSPDHVSFLALLYACSH--SKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLL 713

Query: 764 AGDGSHQQSEQLHGFLENL 782
              G   Q+E+ + F++++
Sbjct: 714 GRSG---QTEEAYKFIKSM 729


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 312/814 (38%), Positives = 487/814 (59%), Gaps = 36/814 (4%)

Query: 74  QPDNF---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
           Q  NF   A+ ++L+  A  + +  G+++ + +   G  +  + +   LV MY KCG D+
Sbjct: 144 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGI-LGVKLVFMYVKCG-DL 201

Query: 131 WDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC 190
            +   VFD+++E     WN MI+     G +  ++  F+ ML   ++P+S+T  S+    
Sbjct: 202 KEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCF 261

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           + ++R   +  GRQVHG   ++G   +NT ++N+L++ Y    +V  A+ LF    DRD+
Sbjct: 262 AAVAR---VEEGRQVHGLICKLGFNSYNT-VVNSLISFYFVGRKVRCAQKLFDELTDRDV 317

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +SWN+++S   +N      +    +M + G+  D  ++ +V  AC+++  L  GK +H+Y
Sbjct: 318 ISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSY 377

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           +++   L       + L+DMY  C ++    RVF+ + +K +  W +MITGY +    + 
Sbjct: 378 SIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDG 437

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A+ LF +M+   G+ P+   ++S++ AC  +      + +H +  +  L  + +V NAL 
Sbjct: 438 AIKLFDEMKS-RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALT 496

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY++ G ++ +  +F  M+ +D +SWNTMI GYT      +AL L  EMQ         
Sbjct: 497 DMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-------- 548

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                       KP+  T+  +LP C +L+AL KG+EIH YA+RN  + D  V +A+VDM
Sbjct: 549 ----------ESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDM 598

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y KCG L  AR +FD++P +++++W V+I  YGMHG G E +     M   G     ++P
Sbjct: 599 YVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTG-----IEP 653

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           +EV+FI++  ACSHSG++ EG  +F  MK +  IEP+ +HYAC+VDLL R G +  A++ 
Sbjct: 654 DEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKF 713

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP + D A  W +LL  CRIH +V++ E  A+ +F LEP+   +YVLL+NIY+ A+ 
Sbjct: 714 IKAMPIKPD-ATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEK 772

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W++   +RKK+ + G++K PGCSWIE   +I+ F+AGD S  Q++++   L+ L  +M++
Sbjct: 773 WEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKE 832

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
           EGY P T+  L N +E EKE  LCGHSEKLA+AFG+LN PPG TIRV KNLRVC DCH+ 
Sbjct: 833 EGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEM 892

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KF+SK  SREIILRD  RFHHFK+G+CSC  YW
Sbjct: 893 AKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 294/573 (51%), Gaps = 46/573 (8%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           S  + E+I  + +M    I+P+++ F ++LK  A +  +  G+Q+H  + K G+  S  T
Sbjct: 229 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFN-SYNT 287

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V N+L++ Y   G  +    K+FD +T++D +SWNSMI+   + G  D  +E F  ML  
Sbjct: 288 VVNSLISFYF-VGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVF 346

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGR 232
            V+    T+V+V +AC+N+     L LG+ +H  S++    +  +   N L+ MY+K G 
Sbjct: 347 GVDIDLATMVNVFVACANIGT---LLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGD 403

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           ++ A  +F+  +++ +VSW ++++   +      A+    +M  RG+ PD  ++ S+L A
Sbjct: 404 LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNA 463

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+    L +GK +H Y +R + L  NSFV +AL DMY  C  ++    VF  +  K +  
Sbjct: 464 CAINGNLKSGKIVHDY-IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS 522

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN MI GY +N    EAL LF +M+  +   P+ TT++ ++PAC    A      IHG+A
Sbjct: 523 WNTMIGGYTKNSLPNEALTLFAEMQRESK--PDGTTVACILPACASLAALDKGREIHGYA 580

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           ++ G   D+YV NA++DMY + G + +++++FD +  +D VSW  MI GY + G   +A+
Sbjct: 581 LRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAI 640

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
               +M+    E                 P+ ++ +++L  C     L +G     + I 
Sbjct: 641 NTFNQMRMTGIE-----------------PDEVSFISILYACSHSGLLDEG-----WKIF 678

Query: 533 NMLATDVVVG------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           N++  +  +       + +VD+ A+ G L  A +    MP++ +   W  ++    +H +
Sbjct: 679 NIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHD 738

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            +     L   VAE  R  E++P    +  L A
Sbjct: 739 VK-----LAEKVAE--RIFELEPENTGYYVLLA 764



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 233/490 (47%), Gaps = 29/490 (5%)

Query: 19  LQTHQPPATTATSLPLPGSQTRCKE------------SWIESLRSEARSNQFREAILSYI 66
             ++     +  S    G + RC +            SW   +    ++      I  +I
Sbjct: 282 FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFI 341

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           +M    +  D      V  A A I  L LGK +H++ +K       V   NTL++MY KC
Sbjct: 342 KMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKC 401

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G D+    +VF+R+ EK  VSW SMI    R G  D A++ F  M    V P  + + S+
Sbjct: 402 G-DLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSI 460

Query: 187 ALACS-NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ N + + G  +   +  N+L   E N+F+ NAL  MYAK G + DA  +F   + 
Sbjct: 461 LNACAINGNLKSGKIVHDYIRENNL---ETNSFVSNALTDMYAKCGSMKDAHDVFSHMKK 517

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +D++SWNT++   ++N    EA+    +M  R  KPDG ++A +LPAC+ L  LD G+EI
Sbjct: 518 KDVISWNTMIGGYTKNSLPNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGREI 576

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H YALRN    ++ +V +A+VDMY  C  +   R +FD I +K +  W  MI GYG + Y
Sbjct: 577 HGYALRNG-YSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG---HAIKLGLGRDRY 422
             EA+  F +M  + G+ P+  +  S++ AC  S    +   I        ++    + Y
Sbjct: 636 GSEAINTFNQM-RMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHY 694

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNM 481
               ++D+ +R G +  +      M ++ D   W  ++ G   C  H D  +  +  + +
Sbjct: 695 A--CMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG---CRIHHDVKLAEKVAERI 749

Query: 482 EEEKNRNNVY 491
            E +  N  Y
Sbjct: 750 FELEPENTGY 759


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 328/837 (39%), Positives = 502/837 (59%), Gaps = 41/837 (4%)

Query: 54  RSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           R+  + +AI  ++++ T ++   DNF FP V+KA  G  D  LG+ IH  V+K G  L  
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL-LLD 65

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V V N L+ MYGK G     V KVF  +  ++ VSWNS+I+     G    + + F M++
Sbjct: 66  VFVGNALIAMYGKFGFVDAAV-KVFHYMPVRNLVSWNSIISGFSENG---FSKDCFDMLV 121

Query: 173 Y-----SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
                   + P   TLV+V   C+   R   +++G ++HG ++++G   +  + N+L+ M
Sbjct: 122 EMMAGEEGLLPDIATLVTVLPVCA---REVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDM 178

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVS 285
           Y+K G + +A+ LF     ++ VSWNT++  L       EA    R+M ++  I+ + V+
Sbjct: 179 YSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVT 238

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + ++LPAC  +  L + KE+H Y++R+    D   V +  V  Y  C  + C  RVF  +
Sbjct: 239 VLNILPACLEISQLRSLKELHGYSIRHGFQYD-ELVANGFVAAYAKCGMLICAERVFYSM 297

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             K +  WNA+I G  QN    +AL L+I+M   +GL P+  T+ S++ A    ++    
Sbjct: 298 ETKTVNSWNALIGGCAQNGDPRKALNLYIQMT-YSGLVPDWFTIGSLLLASAHLKSLRYG 356

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +HG  ++ GL  D ++  +L+ +Y   G    ++ +FD ME + +VSWN MI+GY+  
Sbjct: 357 KEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN 416

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   DAL+L R++           V D        +P+ I +++VL  C   SAL  GKE
Sbjct: 417 GLPEDALILFRKL-----------VSD------GFQPSDIAVVSVLGACSQQSALRLGKE 459

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            H YA++ +L  DV V  + +DMYAK GC+  +R VFD +  +++ +WN II AYG+HG+
Sbjct: 460 THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGD 519

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G+E +EL + M   G       P+  TFI +   CSH+G+V EG+  F +M++ +GIEP 
Sbjct: 520 GEESIELFERMRKVGQM-----PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPK 574

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HYACV+D+LGRAG+++DA +L++ MP + D +  WSSLL  CR    +EIG+I A+ L
Sbjct: 575 LEHYACVMDMLGRAGRLDDALRLVHEMPEQPD-SRVWSSLLSFCRNFGELEIGQIVAEKL 633

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             LEP    +YV LSN+Y+ +  WD    VR+ +K++G++K+ GCSWIE G ++H F+AG
Sbjct: 634 LELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAG 693

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D    QS+++      L ++M K GY P+TS VLH+V+EE+K   L GHSEKLAI FG+L
Sbjct: 694 DNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLL 753

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NT  GTT+R+ KNLR+C DCH A+KF+S++  REII+RD +RFHHFK+G CSCGDYW
Sbjct: 754 NTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 147/266 (55%), Gaps = 6/266 (2%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +T+   SW   +   A++   R+A+  YI+MT S + PD F   ++L A A ++ L  GK
Sbjct: 298 ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++H  V+++G  + S  +  +L+++Y  CG        +FD + EK  VSWN+MI+   +
Sbjct: 358 EVHGFVLRHGLEIDSF-IGISLLSLYIHCGESS-SARLLFDGMEEKSSVSWNAMISGYSQ 415

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWN 216
            G  + AL  FR ++    +PS   +VSV  AC   S++  LRLG++ H  +L+ +   +
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGAC---SQQSALRLGKETHCYALKALLMED 472

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+  + + MYAK G + +++++F   +++DL SWN I+++   +    E++    +M  
Sbjct: 473 VFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRK 532

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
            G  PDG +   +L  CSH  +++ G
Sbjct: 533 VGQMPDGFTFIGILTVCSHAGLVEEG 558



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 13/246 (5%)

Query: 16  LSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQP 75
           L SL  H   +++A  L   G + +   SW   +   +++    +A++ + ++     QP
Sbjct: 378 LLSLYIHCGESSSA-RLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
            + A  +VL A +    L LGK+ H + +K    +  V VA + ++MY K G  + +   
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALK-ALLMEDVFVACSTIDMYAKSGC-IKESRS 494

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VFD +  KD  SWN++IA     G  + ++E F  M      P  FT + +   CS+   
Sbjct: 495 VFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGL 554

Query: 196 -RDGLRLGRQV---HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVS 250
             +GL+   ++   HG   ++  +       +M M  + GR+DDA  L     E  D   
Sbjct: 555 VEEGLKYFNEMQNFHGIEPKLEHY-----ACVMDMLGRAGRLDDALRLVHEMPEQPDSRV 609

Query: 251 WNTIVS 256
           W++++S
Sbjct: 610 WSSLLS 615


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 316/840 (37%), Positives = 484/840 (57%), Gaps = 32/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    +  ++ EA   + +M +  ++PD + F  +L A A  +++  G ++ + +
Sbjct: 172 SWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLI 231

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G+  + + V   L+NM+ KCG  + D  KVF+ +  +D ++W SMI  L R  ++  
Sbjct: 232 LNAGWD-TDLFVGTALINMHIKCGG-VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A   F++M    V+P     VS+  AC++    + L  G++VH     VG +   ++  A
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNH---PEALEQGKRVHARMKEVGLDTEIYVGTA 346

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY K G ++DA  +F   + R++VSW  +++  +Q+ +  EA +F  +M   GI+P+
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  S+L ACS    L  G++IH   ++   + D+  V +AL+ MY  C  +   R VF
Sbjct: 407 RVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR-VRTALLSMYAKCGSLMDARNVF 465

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + IS + +  WNAMIT Y Q+E  + A+  F  + +  G+ P+++T +S++  C   +A 
Sbjct: 466 ERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK-EGIKPDSSTFTSILNVCKSPDAL 524

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +    I+ G   D +++NAL+ M+   G +  +  +F+DM  RD VSWNT+I G+
Sbjct: 525 ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGF 584

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               QHG+        + M+E                 KP+ IT   +L  C +  AL +
Sbjct: 585 V---QHGENQFAFDYFKMMQESG--------------VKPDQITFTGLLNACASPEALTE 627

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ +HA      L  DVVVG+ L+ MY KCG ++ A  VF  +P +NV +W  +I  Y  
Sbjct: 628 GRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQ 687

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E LEL   M  EG     VKP+ +TF+   +AC+H+G++ EG+  F  MKD + I
Sbjct: 688 HGRGKEALELFCQMQQEG-----VKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNI 741

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           EP  +HY C+VDL GRAG + +A + IN M  + D +  W +LLGAC++H +VE+ E  A
Sbjct: 742 EPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPD-SRLWGALLGACQVHLDVELAEKVA 800

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           Q    L+P+    YV+LSNIY++A +W +   +RK M + GV K+PG SWIE    +H F
Sbjct: 801 QKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIF 860

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
            + D +H Q E++H  L  L   M+K GYVPDT  VLH+V + EKE  LC HSE+LAIA+
Sbjct: 861 CSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAY 920

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+L TPP T I ++KNLRVC DCH ATK ISKI  R+II RD  RFHHFK+G CSCGD+W
Sbjct: 921 GLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 330/636 (51%), Gaps = 35/636 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +++ Q  EA+L  + +    IQ     + ++L+     ++L  G++IH H+ K+      
Sbjct: 80  SKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHI-KFSKIQPD 138

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           + + N L++MY KCG+      ++FD + +KD  SWN ++    +  +++ A      M+
Sbjct: 139 IFMWNMLISMYAKCGNTN-SAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKL 230
              V+P  +T V +  AC++    D    G ++    L  G W+T  F+  AL+ M+ K 
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDK---GGELFSLILNAG-WDTDLFVGTALINMHIKC 253

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G VDDA  +F +   RDL++W ++++ L+++ +F +A    + M   G++PD V+  S+L
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC+H E L+ GK +HA  ++   L    +VG+AL+ MY  C  +E    VF+ +  + +
Sbjct: 314 KACNHPEALEQGKRVHA-RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W AMI G+ Q+   EEA + F KM E +G+ PN  T  S++ AC R  A      IH 
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIE-SGIEPNRVTFMSILGACSRPSALKQGRQIHD 431

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             IK G   D  V+ AL+ MY++ G +  ++ +F+ +  ++ V+WN MIT Y    ++ +
Sbjct: 432 RIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDN 491

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A+   + +              L E +   KP+S T  ++L  C +  AL  GK + +  
Sbjct: 492 AVATFQAL--------------LKEGI---KPDSSTFTSILNVCKSPDALELGKWVQSLI 534

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           IR    +D+ + +ALV M+  CG L  A  +F+ MP R++++WN II  +  HGE Q   
Sbjct: 535 IRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAF 594

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           +  K M   G     VKP+++TF  L  AC+    ++EG  L + +  +  ++       
Sbjct: 595 DYFKMMQESG-----VKPDQITFTGLLNACASPEALTEGRRL-HALITEAALDCDVVVGT 648

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            ++ +  + G ++DA+ + + +P +     +W+S++
Sbjct: 649 GLISMYTKCGSIDDAHLVFHNLPKK--NVYSWTSMI 682



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 174/354 (49%), Gaps = 26/354 (7%)

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +F+  K     NA +    +     EA+++ + ++    +  +  T SS++  C++ +  
Sbjct: 62  EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDS-PHIQIHRQTYSSLLQLCIKHKNL 120

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            D E IH H     +  D ++ N L+ MY++ G    +K IFD+M  +D  SWN ++ GY
Sbjct: 121 GDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGY 180

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               ++ +A  L  +M              + + V   KP+  T + +L  C     + K
Sbjct: 181 VQHRRYEEAFRLHEQM--------------VQDGV---KPDKYTFVYMLNACADAKNVDK 223

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G E+ +  +     TD+ VG+AL++M+ KCG ++ A +VF+ +P R++ITW  +I     
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           H + ++   L + M  EG     V+P++V F++L  AC+H   + +G  +  +MK + G+
Sbjct: 284 HRQFKQACNLFQVMEEEG-----VQPDKVAFVSLLKACNHPEALEQGKRVHARMK-EVGL 337

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           +        ++ +  + G +EDA ++ N++        +W++++     H  +E
Sbjct: 338 DTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR--NVVSWTAMIAGFAQHGRME 389



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 146/307 (47%), Gaps = 36/307 (11%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           +++++T   N  +   +  GQ  +A+++L  + +   + +R                  T
Sbjct: 64  VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQ-----------------T 106

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             ++L  C     L  G+ IH +   + +  D+ + + L+ MYAKCG  N A+++FD MP
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP 166

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            ++V +WN+++  Y  H   +E   L + MV +G     VKP++ TF+ +  AC+ +  V
Sbjct: 167 DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG-----VKPDKYTFVYMLNACADAKNV 221

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            +G +LF  +  + G +        ++++  + G V+DA ++ N +P        W+S++
Sbjct: 222 DKGGELF-SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRR--DLITWTSMI 278

Query: 687 GACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
                H+  +     A NLF       ++PD  + +V L    +  +  ++   V  +MK
Sbjct: 279 TGLARHRQFK----QACNLFQVMEEEGVQPDKVA-FVSLLKACNHPEALEQGKRVHARMK 333

Query: 741 EMGVRKE 747
           E+G+  E
Sbjct: 334 EVGLDTE 340


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/767 (41%), Positives = 458/767 (59%), Gaps = 35/767 (4%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+++ K GS + +  +VF  I +K    +++M+    R    D A+  F  M Y  V P
Sbjct: 115 LVSLFCKFGS-LHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRP 173

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             +    +   C +      LR G+++H   +  G   N F M  ++ MYAK   V++A 
Sbjct: 174 VVYNFTYLLKVCGD---NADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAY 230

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F    +RDLV WNTI+S  +QN     A+  + +M   G +PD ++I S+LPA + + 
Sbjct: 231 KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290

Query: 298 MLDTGKEIHAYALRNDILIDNSFV--GSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
            L  G+ IH Y++R       SFV   +ALVDMY  C  V   R +FD ++ K +  WN+
Sbjct: 291 SLRIGRSIHGYSMRAGF---ESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNS 347

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MI GY QN     A+ +F KM +      N T M ++  AC           +H    +L
Sbjct: 348 MIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGAL-HACADLGDVEQGRFVHKLLDQL 406

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
            LG D  V N+L+ MYS+  R++I+  IF++++ +  VSWN MI GY   G+  +A+   
Sbjct: 407 ELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYF 466

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +MQ         N+          KP+S T+++V+P    LS L + K IH   IR  L
Sbjct: 467 CKMQ-------LQNI----------KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V V +ALVDMYAKCG ++ AR++FD+M  R+V TWN +I  YG HG G+  LEL + 
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M  E      +KPNEVTF+ + +ACSHSG+V EG   F  MK DYG+EP+ DHY  +VDL
Sbjct: 570 MKKE-----VIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDL 624

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRA ++ +A+  I  MP E      + ++LGACRIH+NVE+GE AA  +F L+PD   +
Sbjct: 625 LGRANRLNEAWDFIQKMPIE-PAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGY 683

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           +VLL+NIY++A +WDK   VR  M++ G++K PG S +E  +E+H F +G  SH Q++++
Sbjct: 684 HVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKI 743

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           + FLE L  R++  GY+PDT+ V H+V +  KE LL  HSEKLAIAF +LNT PGTTI +
Sbjct: 744 YAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC DCH ATK+IS +  REII+RD+RRFHHFK+GTCSCGDYW
Sbjct: 803 RKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 265/537 (49%), Gaps = 26/537 (4%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + +  E +   L+  AR++   +A+  +  M    ++P  + F  +LK      DL  GK
Sbjct: 136 EDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGK 195

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IH  ++  G+  S+V     +VNMY KC   + + YK+FDR+ E+D V WN++I+   +
Sbjct: 196 EIHCQLIVNGFA-SNVFAMTGVVNMYAKC-RLVEEAYKMFDRMPERDLVCWNTIISGYAQ 253

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    ALE    M      P S T+VS+  A +++     LR+GR +HG S+R G E  
Sbjct: 254 NGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG---SLRIGRSIHGYSMRAGFESF 310

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             +  AL+ MY+K G V  A+ +F     + +VSWN+++    QN     A+   ++M  
Sbjct: 311 VNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD 370

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             ++   V++   L AC+ L  ++ G+ +H    + ++  D S + S L+ MY  C+ V+
Sbjct: 371 EQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNS-LISMYSKCKRVD 429

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+ +  K +  WNAMI GY QN    EA+  F KM ++  + P++ TM SV+PA 
Sbjct: 430 IAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM-QLQNIKPDSFTMVSVIPAL 488

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                 P  + IHG  I+  L ++ +V  AL+DMY++ G +  ++ +FD M+ R   +WN
Sbjct: 489 AELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWN 548

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI GY   G HG     L   + M++E                KPN +T + VL  C  
Sbjct: 549 AMIDGY---GTHGLGKAALELFEKMKKEV--------------IKPNEVTFLCVLSACSH 591

Query: 517 LSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              + +G +      ++  L   +    A+VD+  +   LN A      MP+   I+
Sbjct: 592 SGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAIS 648



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 27/275 (9%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK GL  +   Q  L+ ++ + G +  +  +F  +E +    ++TM+ GY       DA+
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
                M+           YD     +RP   + T +  L  CG  + L KGKEIH   I 
Sbjct: 161 SFFCRMR-----------YD----GVRPVVYNFTYL--LKVCGDNADLRKGKEIHCQLIV 203

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           N  A++V   + +V+MYAKC  +  A ++FD MP R+++ WN II  Y  +G G+  LEL
Sbjct: 204 NGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALEL 263

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC 651
           +  M  EG R     P+ +T +++  A +  G +  G  +  Y M+   G E   +    
Sbjct: 264 VLRMQEEGKR-----PDSITIVSILPAVADVGSLRIGRSIHGYSMRA--GFESFVNVSTA 316

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           +VD+  + G V  A  + + M  +     +W+S++
Sbjct: 317 LVDMYSKCGSVGTARLIFDRMTGK--TVVSWNSMI 349


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/824 (37%), Positives = 477/824 (57%), Gaps = 31/824 (3%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
            EA   Y  M    +  +   + ++L A +  + L  GK IH+H+ + G+  S V + N L
Sbjct: 313  EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS-SDVQIGNAL 371

Query: 120  VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            ++MY +CG D+    ++F  + ++D +SWN++IA   R      A+  ++ M    V+P 
Sbjct: 372  ISMYARCG-DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430

Query: 180  SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
              T + +  AC+N S       G+ +H + LR G + N  + NALM MY + G + +A+ 
Sbjct: 431  RVTFLHLLSACANSS---AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487

Query: 239  LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            +F+  + RD++SWN++++  +Q+  +  A    ++M    ++PD ++ ASVL  C + E 
Sbjct: 488  VFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA 547

Query: 299  LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
            L+ GK+IH     + + +D + +G+AL++MY  C  ++  R VF  +  + +  W AMI 
Sbjct: 548  LELGKQIHGRITESGLQLDVN-LGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606

Query: 359  GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            G      D +A+ LF +M+   G  P  +T SS++  C  S    + + +  + +  G  
Sbjct: 607  GCADQGEDMKAIELFWQMQN-EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYE 665

Query: 419  RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
             D  V NAL+  YS+ G +  ++ +FD M  RD VSWN +I GY   G    A+    +M
Sbjct: 666  LDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM 725

Query: 479  QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
            Q              ++ V+   PN  + +++L  C + SAL +GK +HA  ++  L  D
Sbjct: 726  Q--------------EQDVV---PNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGD 768

Query: 539  VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
            V VG+AL+ MYAKCG    A+ VFD +  +NV+TWN +I AY  HG   + L     M  
Sbjct: 769  VRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEK 828

Query: 599  EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            EG     +KP+  TF ++ +AC+H+G+V EG  +F  M+ +YG+ P+ +HY C+V LLGR
Sbjct: 829  EG-----IKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGR 883

Query: 659  AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
            A + ++A  LIN MP   D A  W +LLGACRIH N+ + E AA N   L     + Y+L
Sbjct: 884  ARRFQEAETLINQMPFPPD-AAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 942

Query: 719  LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
            LSN+Y++A  WD    +R+ M+  G+RKEPG SWIE  + IH+F+A D SH ++ +++  
Sbjct: 943  LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 1002

Query: 779  LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
            L+ LS  M + GY PDT  VLH++ +  +ET LC HSE+LAIA+G++ TPPGT IR+ KN
Sbjct: 1003 LKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKN 1062

Query: 839  LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            LR+C DCH A+KFISK+  REII RD  RFH FKNG CSC DYW
Sbjct: 1063 LRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 188/632 (29%), Positives = 321/632 (50%), Gaps = 33/632 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+    ++A   + EM  +   P+   + ++L A     +L  GK+IH+ +
Sbjct: 95  SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GY      V N+L++MYGKCG D+    +VF  I+ +D VS+N+M+    +      
Sbjct: 155 IKAGYQRDP-RVQNSLLSMYGKCG-DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L  F  M    + P   T +++  A +  S  D    G+++H  ++  G   +  +  A
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE---GKRIHKLTVEEGLNSDIRVGTA 269

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ M  + G VD AK  FK   DRD+V +N ++++L+Q+   +EA     +M   G+  +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  S+L ACS  + L+ GK IH++ +  D    +  +G+AL+ MY  C ++   R +F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSH-ISEDGHSSDVQIGNALISMYARCGDLPKARELF 388

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  WNA+I GY + E   EA+ L+ +M+   G+ P   T   ++ AC  S A+
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS-EGVKPGRVTFLHLLSACANSSAY 447

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            D + IH   ++ G+  + ++ NALM+MY R G +  ++ +F+  + RD +SWN+MI G+
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G +  A  L +EMQN E E                 P++IT  +VL GC    AL  
Sbjct: 508 AQHGSYETAYKLFQEMQNEELE-----------------PDNITFASVLSGCKNPEALEL 550

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IH     + L  DV +G+AL++MY +CG L  AR VF  +  R+V++W  +I     
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYG 641
            GE  + +EL   M  EG R     P + TF ++   C+ S  + EG  +  Y +   Y 
Sbjct: 611 QGEDMKAIELFWQMQNEGFR-----PVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYE 665

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           ++    +   ++    ++G + DA ++ + MP
Sbjct: 666 LDTGVGN--ALISAYSKSGSMTDAREVFDKMP 695



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 318/611 (52%), Gaps = 33/611 (5%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A+L+     + L   K+IHA +V+   G   + ++N L+NMY KC S + D ++VF  
Sbjct: 30  YVALLQNCTRKRLLPEAKRIHAQMVEAWVG-PDIFLSNLLINMYVKCRS-VLDAHQVFKE 87

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +D +SWNS+I+   + G    A + F  M  +   P+  T +S+  AC + +    L
Sbjct: 88  MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE---L 144

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+++H   ++ G + +  + N+L++MY K G +  A+ +F     RD+VS+NT++   
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q     E +    QM+  GI PD V+  ++L A +   MLD GK IH   +   +  D 
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             VG+ALV M   C +V+  ++ F   +D+ + ++NA+I    Q+ ++ EA   + +M  
Sbjct: 265 R-VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+  N TT  S++ AC  S+A    + IH H  + G   D  + NAL+ MY+R G + 
Sbjct: 324 -DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++ +F  M  RD +SWN +I GY      G+A+ L ++MQ+              E V 
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS--------------EGV- 427

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             KP  +T + +L  C   SA A GK IH   +R+ + ++  + +AL++MY +CG L  A
Sbjct: 428 --KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           + VF+    R+VI+WN +I  +  HG  +   +L + M  E     E++P+ +TF ++ +
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE-----ELEPDNITFASVLS 540

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            C +   +  G  +  ++ +  G++   +    ++++  R G ++DA  + + +  +   
Sbjct: 541 GCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL--QHRD 597

Query: 679 AGAWSSLLGAC 689
             +W++++G C
Sbjct: 598 VMSWTAMIGGC 608



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 221/462 (47%), Gaps = 25/462 (5%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G+Q R   SW   +   A+   +  A   + EM   +++PDN  F +VL      + L L
Sbjct: 491 GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GKQIH  + + G  L  V + N L+NMY +CGS + D   VF  +  +D +SW +MI   
Sbjct: 551 GKQIHGRITESGLQL-DVNLGNALINMYIRCGS-LQDARNVFHSLQHRDVMSWTAMIGGC 608

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G+   A+E F  M      P   T  S+   C++ +  D    G++V    L  G E
Sbjct: 609 ADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDE---GKKVIAYILNSGYE 665

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +T + NAL++ Y+K G + DA+ +F     RD+VSWN I++  +QN     AV F  QM
Sbjct: 666 LDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM 725

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + + P+  S  S+L ACS    L+ GK +HA  ++  +  D   VG+AL+ MY  C  
Sbjct: 726 QEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVR-VGAALISMYAKCGS 784

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               + VFD I +K +  WNAMI  Y Q+    +AL  F  ME+  G+ P+ +T +S++ 
Sbjct: 785 QGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEK-EGIKPDGSTFTSILS 843

Query: 395 ACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           AC  +       + F   E  +G    +    + Y    L+ +  R  R + ++T+ + M
Sbjct: 844 ACNHAGLVLEGYQIFSSMESEYGVLPTI----EHY--GCLVGLLGRARRFQEAETLINQM 897

Query: 448 EV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
               D   W T++     C  HG+  +      N  +   RN
Sbjct: 898 PFPPDAAVWETLLGA---CRIHGNIALAEHAANNALKLNARN 936



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 23/281 (8%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            T  +++  C R    P+ + IH   ++  +G D ++ N L++MY +   +  +  +F +
Sbjct: 28  ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  RD +SWN++I+ Y   G    A  L  EMQN                     PN IT
Sbjct: 88  MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG-----------------FIPNKIT 130

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
            +++L  C + + L  GK+IH+  I+     D  V ++L+ MY KCG L  AR+VF  + 
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+V+++N ++  Y      +E L L   M +EG     + P++VT+I L  A +   M+
Sbjct: 191 PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEG-----ISPDKVTYINLLDAFTTPSML 245

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            EG  + +K+  + G+         +V +  R G V+ A Q
Sbjct: 246 DEGKRI-HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQ 285


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 333/845 (39%), Positives = 496/845 (58%), Gaps = 39/845 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +   S ++ EAI  Y +M    +  D   FP+VLKA   + +  LG +IH   
Sbjct: 112 SWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVA 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKW 161
           VK GYG   V V N L+ MYGKCG D+     +FD I   ++D VSWNS+I+     G  
Sbjct: 172 VKCGYG-EFVFVCNALIAMYGKCG-DLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIM 220
             AL  FR M    V  +++T V+   A   +     ++LG  +HG  L+   + + ++ 
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVA---ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVA 286

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NAL+AMYAK GR++DA  +F+S   RD VSWNT++S L QN+ + +A+ + R M   G K
Sbjct: 287 NALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD VS+ +++ A      L  GKE+HAYA+RN  L  N  +G+ LVDMY  C  V+    
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG-LDSNMQIGNTLVDMYAKCCCVKYMGH 405

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--VR 398
            F+ + +K +  W  +I GY QNE+  EA+ LF K++ V G+  +   + SV+ AC  ++
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQ-VKGMDVDPMMIGSVLRACSGLK 464

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S  F  +  IHG+  K  L  D  +QNA++++Y  +G I+ ++  F+ +  +D VSW +M
Sbjct: 465 SRNFIRE--IHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSM 521

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           IT     G   +AL L                Y L +T +  +P+SI +++ L     LS
Sbjct: 522 ITCCVHNGLPVEALELF---------------YSLKQTNI--QPDSIAIISALSATANLS 564

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L KGKEIH + IR     +  + S+LVDMYA CG +  +R++F  +  R++I W  +I 
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMIN 624

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A GMHG G + + L K M  +      V P+ +TF+AL  ACSHSG++ EG   F  MK 
Sbjct: 625 ANGMHGCGNKAIALFKKMTDQ-----NVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY 679

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            Y +EP P+HYAC+VDLL R+  +E+AY  +  MP +   +  W +LLGAC IH N E+G
Sbjct: 680 GYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIK-PSSEIWCALLGACHIHSNKELG 738

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E+AA+ L   + + +  Y L+SNI+++   W+   +VR +MK  G++K PGCSWIE  ++
Sbjct: 739 ELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNK 798

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEK 817
           IH F+A D SH Q++ ++  L   ++ + K+G Y+  T  V HNV+EEEK  +L GHSE+
Sbjct: 799 IHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSER 858

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+ +G+L TP GT IR+ KNLR+C+DCH   K  S++  R +++RD  RFHHF+ G CS
Sbjct: 859 LALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCS 918

Query: 878 CGDYW 882
           CGD+W
Sbjct: 919 CGDFW 923



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 169/618 (27%), Positives = 309/618 (50%), Gaps = 40/618 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +L      + L  G+Q+HA ++K      S  +A  LV MYGKCGS + D  KVFD
Sbjct: 48  AHSLLLDLCVAAKALPQGQQLHALLLKSHL---SAFLATKLVLMYGKCGS-LRDAVKVFD 103

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            ++E+   SWN+++      GK+  A+E ++ M    V   + T  SV  AC  L     
Sbjct: 104 EMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGES-- 161

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSF--EDRDLVSWNTIV 255
            RLG ++HG +++ G     F+ NAL+AMY K G +  A+ LF     E  D VSWN+I+
Sbjct: 162 -RLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S+       LEA+   R+M   G+  +  +  + L        +  G  IH   L+++  
Sbjct: 221 SAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHF 280

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D  +V +AL+ MY  C  +E   RVF+ +  +    WN +++G  QNE   +AL  F  
Sbjct: 281 AD-VYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRD 339

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M+  +G  P+  ++ +++ A  RS      + +H +AI+ GL  +  + N L+DMY++  
Sbjct: 340 MQN-SGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCC 398

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++     F+ M  +D +SW T+I GY     H +A+ L R++Q          V  +D 
Sbjct: 399 CVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQ----------VKGMD- 447

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                  + + + +VL  C  L +    +EIH Y  +  LA D+++ +A+V++Y + G +
Sbjct: 448 ------VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHI 500

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           ++ARR F+ +  +++++W  +I     +G   E LEL  ++     +   ++P+ +  I+
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL-----KQTNIQPDSIAIIS 555

Query: 616 LFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
             +A ++   + +G ++  + ++  + +E      + +VD+    G VE++ ++ + +  
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVKQ 613

Query: 675 EFDKAGAWSSLLGACRIH 692
                  W+S++ A  +H
Sbjct: 614 R--DLILWTSMINANGMH 629


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 321/853 (37%), Positives = 490/853 (57%), Gaps = 37/853 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDI---QPDNFAFPAVLKAVAGIQD 92
           G   R   SW   + +   S    EA+  Y  M  S      PD     +VLKA     D
Sbjct: 120 GMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGD 179

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE--KDQVSWNS 150
              G ++H   VK G   S++ VAN L+ MY KCG  +    +VF+ + +  +D  SWNS
Sbjct: 180 GRCGGEVHGLAVKVGLDKSTL-VANALIGMYAKCGL-LDSALRVFEWLQQDARDVASWNS 237

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +++   + G+   AL  FR M  +    +S+T V+V   C+ L     L LGR++H   L
Sbjct: 238 VVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL---LSLGRELHAALL 294

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           + G       NAL+ MYAK GRVD A  +F    ++D +SWN+++S   QN  + EA+ F
Sbjct: 295 KCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDF 354

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M   G +PD   + S+  A  HL  L+ G+E HAYA++  +  D   VG+ L+DMY 
Sbjct: 355 FGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQ-VGNTLMDMYI 413

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +EC  +VF+ +  +    W  ++  + Q+    EAL + +++++  G+  ++  + 
Sbjct: 414 KCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK-EGIMVDSMMIG 472

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++  C   ++    + +H +AI+ GL  D  ++N L+D+Y   G  + S  +F  +E +
Sbjct: 473 SILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKK 531

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSW +MI   T  G+   A+ L  EMQ       + N+          +P+S+ L+++
Sbjct: 532 DIVSWTSMINCCTNNGRLNGAVFLFTEMQ-------KANI----------QPDSVALVSI 574

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L     LS+L KGK++H + IR     +  V S+LVDMY+ CG +N+A RVF+    ++V
Sbjct: 575 LVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDV 634

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + W  +I A GMHG G++ ++L K M+  G     + P+ V+F+AL  ACSHS +V EG 
Sbjct: 635 VLWTAMINATGMHGHGKQAIDLFKRMLQTG-----LTPDHVSFLALLYACSHSKLVEEGK 689

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
                M   Y ++P  +HYACVVD+LGR+G+ E+AY+ I  MP +  K+  W +LLGACR
Sbjct: 690 HYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMD-PKSAVWCALLGACR 748

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H+N  +  +AA  L  LEPD   +Y+L+SN+++    W+ A + R +M E G+RK P C
Sbjct: 749 VHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPAC 808

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKET 809
           SWIE G+ IH F +GD  H+ SE +H  L  ++E +R+EG YV DT  VLH+ +EEEK  
Sbjct: 809 SWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKID 868

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSE++AIAFG+++T PG  IR+AKNLRVC DCH+ TK +SK+  R+I++RD  RFH
Sbjct: 869 MLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFH 928

Query: 870 HFKNGTCSCGDYW 882
           HF  G+CSC D+W
Sbjct: 929 HFSGGSCSCEDFW 941



 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 211/794 (26%), Positives = 378/794 (47%), Gaps = 90/794 (11%)

Query: 11  LPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTR 70
           LPSPPL     H+     A S+  P S +        SL+   +    R+A+      TR
Sbjct: 6   LPSPPLP----HRTIPPVAPSVSPPNSAS-------ASLKRLCKEGDLRQALRQLT--TR 52

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY------GLSSVTVANTLVNMYG 124
           +    +++ +  VL  VA  +  + G+Q+HAH V  G       G     +A  LV MYG
Sbjct: 53  APPAREHYGW--VLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGF----LATKLVFMYG 106

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV---EPSSF 181
           +CG  + D  ++F+ +  +   SWN+++      G    A+  +  M  S      P   
Sbjct: 107 RCGR-VDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGC 165

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           TL SV  AC   +  DG R G +VHG +++VG + +T + NAL+ MYAK G +D A  +F
Sbjct: 166 TLASVLKACG--AEGDG-RCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVF 222

Query: 241 KSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +  +   RD+ SWN++VS   QN + LEA+   R M   G   +  +  +VL  C+ L +
Sbjct: 223 EWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL 282

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  G+E+HA  L+    ++     +AL+ MY     V+   RVF  I++K    WN+M++
Sbjct: 283 LSLGRELHAALLKCGSELN--IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLS 340

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y QN +  EA+  F +M +  G  P+   + S+  A        +    H +AIK  L 
Sbjct: 341 CYVQNSFYAEAIDFFGEMLQ-HGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  V N LMDMY + G IE S  +F+ M +RD +SW T++  +    +H +AL ++ E+
Sbjct: 400 TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILEL 459

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q               E ++    +S+ + ++L  C  L +++  K++H YAIRN L  D
Sbjct: 460 QK--------------EGIM---VDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LD 501

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           +++ + L+D+Y +CG  + +  +F  +  +++++W  +I     +G     + L   M  
Sbjct: 502 LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEM-- 559

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLG 657
              +   ++P+ V  +++  A +    +++G  +  + ++ ++ IE      + +VD+  
Sbjct: 560 ---QKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSLVDMYS 614

Query: 658 RAGKVEDAYQLINMMPPEFDKAGA-----WSSLLGACRIH----QNVEIGEIAAQNLFLL 708
             G +  A ++       F++A       W++++ A  +H    Q +++ +   Q    L
Sbjct: 615 GCGSMNYAIRV-------FERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQT--GL 665

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
            PD   H   L+ +Y+ +    K ++  K   ++ V K     W E    +   L   G 
Sbjct: 666 TPD---HVSFLALLYACSH--SKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSG- 719

Query: 769 HQQSEQLHGFLENL 782
             Q+E+ + F++ +
Sbjct: 720 --QTEEAYEFIKTM 731


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 316/808 (39%), Positives = 469/808 (58%), Gaps = 31/808 (3%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D+  +  + +    ++D  LGKQ+  H+++ G  L+ +   NTL+ ++  CG +M +  +
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLN-IYELNTLIKLHSICG-NMLEARQ 117

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
            FD +  K  V+WN++IA   + G    A   FR M+   +EPS  T + V  ACS+ + 
Sbjct: 118 TFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPA- 176

Query: 196 RDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
             GL+LG++ H   ++VG  + F I  AL++MY K G +D A+ +F     RD+ ++N +
Sbjct: 177 --GLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVM 234

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   +++    +A     +M   G KP+ +S  S+L  CS  E L  GK +HA  + N  
Sbjct: 235 IGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCM-NTG 293

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L+D+  V +AL+ MY  C  +E  RRVFD +  + +  W  MI GY +N   E+A  LF 
Sbjct: 294 LVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFA 353

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            M+E  G+ P+  T   ++ AC  S        IH   ++ G G D  V  AL+ MY++ 
Sbjct: 354 TMQE-EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKC 412

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G I+ ++ +FD M  RD VSW+ MI  Y   G   +A      M+       RNNV    
Sbjct: 413 GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMK-------RNNV---- 461

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                 +P+ +T + +L  CG L AL  G EI+  AI+  L + + VG+AL++M  K G 
Sbjct: 462 ------EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGS 515

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  AR +F+ M  R+V+TWNV+I  Y +HG  +E L+L   M+ E       +PN VTF+
Sbjct: 516 IERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE-----RFRPNSVTFV 570

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +ACS +G V EG   F  + D  GI P+ + Y C+VDLLGRAG++++A  LIN MP 
Sbjct: 571 GVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPL 630

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           +   +  WS+LL ACRI+ N+++ E AA+   + EP   + YV LS++Y++A +W+    
Sbjct: 631 K-PNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAK 689

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK M+  GVRKE GC+WIE   ++H F+  D SH Q+ +++  L  L   +++EGY+P 
Sbjct: 690 VRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPV 749

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  VLHNV E+EKE  +  HSEKLAIA+G+L+ P G  IR+ KNLRVC DCH A+KFISK
Sbjct: 750 TQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISK 809

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  REII RD  RFHHFKNG CSCGDYW
Sbjct: 810 VTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 268/549 (48%), Gaps = 37/549 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+    +EA   + +M    ++P    F  VL A +    L LGK+ HA V
Sbjct: 129 TWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQV 188

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+ +S   +   LV+MY K GS M    +VFD + ++D  ++N MI    + G  + 
Sbjct: 189 IKVGF-VSDFRIGTALVSMYVKGGS-MDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEK 246

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A + F  M     +P+  + +S+   CS     + L  G+ VH   +  G  +   +  A
Sbjct: 247 AFQLFYRMQQEGFKPNRISFLSILDGCST---PEALAWGKAVHAQCMNTGLVDDVRVATA 303

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY   G ++ A+ +F   + RD+VSW  ++   ++N    +A      M   GI+PD
Sbjct: 304 LIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPD 363

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYCNCREVECG 338
            ++   ++ AC+    L   +EIH+  +R     D+L+D     +ALV MY  C  ++  
Sbjct: 364 RITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD-----TALVHMYAKCGAIKDA 418

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R+VFD +S + +  W+AMI  Y +N   EEA   F  M+    + P+  T  +++ AC  
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKR-NNVEPDVVTYINLLNACGH 477

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A      I+  AIK  L     V NAL++M  + G IE ++ IF++M  RD V+WN M
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I GY++ G   +AL L   M              L E   R +PNS+T + VL  C    
Sbjct: 538 IGGYSLHGNAREALDLFDRM--------------LKE---RFRPNSVTFVGVLSACSRAG 580

Query: 519 ALAKGKEIHAYAI--RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
            + +G+   +Y +  R ++ T  + G  +VD+  + G L+ A  + + MP++ N   W+ 
Sbjct: 581 FVEEGRRFFSYLLDGRGIVPTMELYG-CMVDLLGRAGELDEAELLINRMPLKPNSSIWST 639

Query: 576 IIMAYGMHG 584
           ++ A  ++G
Sbjct: 640 LLAACRIYG 648



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 181/377 (48%), Gaps = 25/377 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +R  A ++   +A   +  M    IQPD   +  ++ A A   DLSL ++IH+ V
Sbjct: 331 SWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQV 390

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+G + + V   LV+MY KCG+ + D  +VFD ++ +D VSW++MI      G  + 
Sbjct: 391 VRAGFG-TDLLVDTALVHMYAKCGA-IKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEE 448

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A E F +M  +NVEP   T +++  AC +L     L LG +++  +++    +   + NA
Sbjct: 449 AFETFHLMKRNNVEPDVVTYINLLNACGHLG---ALDLGMEIYTQAIKADLVSHIPVGNA 505

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ M  K G ++ A+ +F++   RD+V+WN ++   S +    EA+    +M     +P+
Sbjct: 506 LINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPN 565

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+   VL ACS    ++ G+   +Y L    ++    +   +VD+     E++    + 
Sbjct: 566 SVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLI 625

Query: 343 DFISDK-KIALWNAMITG---YGQ--------------NEYDEEALMLFIKMEEVAGLWP 384
           + +  K   ++W+ ++     YG                 YD    +    M   AG+W 
Sbjct: 626 NRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWE 685

Query: 385 NATTMSSVVPA-CVRSE 400
           N   +  V+ +  VR E
Sbjct: 686 NVAKVRKVMESRGVRKE 702


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 324/791 (40%), Positives = 469/791 (59%), Gaps = 43/791 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QI   ++K G+  +       +++++ K GS+  +  +VF+ +  K  V ++ M+    +
Sbjct: 65  QILPFIIKNGF-YNEHLFQTKVISLFCKFGSNS-EAARVFEHVELKLDVLYHIMLKGYAK 122

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS-NLSRRDGLRLGRQVHGNSLRVG-EW 215
                 AL  F  M+   V         +   C  NL     L+ GR++HG  +  G E 
Sbjct: 123 NSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLD----LKKGREIHGLIITNGFES 178

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+M A+M++YAK  ++D+A  +F+  + +DLVSW T+V+  +QN     A+  + QM 
Sbjct: 179 NLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQ 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYCNCR 333
             G KPD V++ S+LPA + ++ L  G+ IH YA R+    L++   V +AL+DMY  C 
Sbjct: 239 EAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN---VTNALLDMYFKCG 295

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
                R VF  +  K +  WN MI G  QN   EEA   F+KM +  G  P   TM  V+
Sbjct: 296 SARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLD-EGEVPTRVTMMGVL 354

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC           +H    KL L  +  V N+L+ MYS+  R++I+ +IF+++E +  V
Sbjct: 355 LACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNV 413

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WN MI GY   G   +AL L   MQ+                    K +  TL+ V+  
Sbjct: 414 TWNAMILGYAQNGCVKEALNLFCMMQSQG-----------------IKLDCFTLVGVITA 456

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
               S   + K IH  A+R  +  +V V +ALVDMYAKCG +  AR++FD+M  R+VITW
Sbjct: 457 LADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITW 516

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  YG HG G+E L+L   M     + G VKPN++TF+++ +ACSHSG V EG+ LF
Sbjct: 517 NAMIDGYGTHGVGKETLDLFNEM-----QKGAVKPNDITFLSVISACSHSGFVEEGLLLF 571

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRI 691
             M++DY +EP+ DHY+ +VDLLGRAG+++DA+  I  MP  P     GA   +LGAC+I
Sbjct: 572 KSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGA---MLGACKI 628

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+NVE+GE AAQ LF L+PD   ++VLL+NIY+S  +WDK   VR  M++ G+ K PGCS
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W+E  +EIH F +G  +H +S++++ FLE L + ++  GYVPD   + H+V E+ K+ LL
Sbjct: 689 WVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLL 747

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LAIAFG+LNT PGTT+ + KNLRVC DCH  TK+IS +  REII+RD+RRFHHF
Sbjct: 748 SSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHF 807

Query: 872 KNGTCSCGDYW 882
           KNG+CSCGDYW
Sbjct: 808 KNGSCSCGDYW 818



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 222/419 (52%), Gaps = 22/419 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++   + A+   ++M  +  +PD+    ++L AVA ++ L +G+ IH + 
Sbjct: 213 SWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYA 272

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G+  S V V N L++MY KCGS       VF  +  K  VSWN+MI    + G+ + 
Sbjct: 273 FRSGFE-SLVNVTNALLDMYFKCGSARI-ARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMN 221
           A   F  ML     P+  T++ V LAC+NL     L  G  VH   + L++ + N  +MN
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLG---DLERGWFVHKLLDKLKL-DSNVSVMN 386

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L++MY+K  RVD A ++F + E  + V+WN ++   +QN    EA+     M  +GIK 
Sbjct: 387 SLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL 445

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++  V+ A +   +    K IH  A+R   + +N FV +ALVDMY  C  ++  R++
Sbjct: 446 DCFTLVGVITALADFSVNRQAKWIHGLAVR-ACMDNNVFVSTALVDMYAKCGAIKTARKL 504

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + ++ +  WNAMI GYG +   +E L LF +M++ A + PN  T  SV+ AC  S  
Sbjct: 505 FDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGA-VKPNDITFLSVISACSHS-G 562

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           F ++    G  +   +  D Y++      +A++D+  R G+++ +     +M ++  +S
Sbjct: 563 FVEE----GLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGIS 617


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/875 (36%), Positives = 497/875 (56%), Gaps = 33/875 (3%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM 68
           +++ S  L +   H    T++ S+    S +     W   +R+   +  F EA+  Y E 
Sbjct: 47  SVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSET 106

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            R  +QPD + FP+V+ A AG+ D  + K IH  V+  G+G S + + N L++MY +  +
Sbjct: 107 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG-SDLYIGNALIDMYCRF-N 164

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    KVF+ +  +D VSWNS+I+     G W+ ALE +       V P S+T+ SV  
Sbjct: 165 DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLR 224

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC  L     +  G  +HG   ++G + +  + N L++MY K   + D + +F     RD
Sbjct: 225 ACGGLG---SVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 281

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSWNT++   SQ   + E++    +M +   KPD ++I S+L AC HL  L+ GK +H 
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHD 340

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           Y + +    D +   + L++MY  C  +   + VF  +  K    WN+MI  Y QN   +
Sbjct: 341 YMITSGYECDTT-ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 399

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EA+ LF  M+    + P++ T   ++    +       + +H    K+G   +  V N L
Sbjct: 400 EAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTL 457

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY++ G +  S  +F++M+ RD ++WNT+I     C    D  + LR +  M  E   
Sbjct: 458 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS---CVHSEDCNLGLRMISRMRTEG-- 512

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                         P+  T++++LP C  L+A  +GKEIH    +  L +DV VG+ L++
Sbjct: 513 ------------VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 560

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+KCG L  + +VF LM  ++V+TW  +I A GM+GEG++ +     M A G     + 
Sbjct: 561 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG-----IV 615

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ V F+A+  ACSHSG+V EG++ F++MK DY IEP  +HYACVVDLL R+  ++ A  
Sbjct: 616 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 675

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP + D +  W +LL ACR+  + EI E  ++ +  L PD   +YVL+SNIY++  
Sbjct: 676 FILSMPLKPDSS-IWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 734

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            WD+   +RK +K  G++K+PGCSW+E  ++++ F  G    +Q E+++  L  L+  M 
Sbjct: 735 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMA 794

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           KEGY+ +   VLH+++E+EK  +LCGHSE+LAIAFG+LNT PGT ++V KNLRVC DCH 
Sbjct: 795 KEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHT 854

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TK+ISKI  RE+++RD  RFH FK+G CSCGDYW
Sbjct: 855 VTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 332/845 (39%), Positives = 495/845 (58%), Gaps = 39/845 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +   S ++ EAI  Y EM    +  D   FP+VLKA   + +  LG +IH   
Sbjct: 112 TWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVA 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKW 161
           VK G+G   V V N L+ MYGKCG D+     +FD I   ++D VSWNS+I+     GK 
Sbjct: 172 VKCGFG-EFVFVCNALIAMYGKCG-DLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIM 220
             AL  FR M    V  +++T V+   A   +     ++LG  +HG +L+   + + ++ 
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVA---ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVA 286

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NAL+AMYAK GR++DA+ +F S   RD VSWNT++S L QN+ + +A+ + R M     K
Sbjct: 287 NALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD VS+ +++ A      L  GKE+HAYA+RN  L  N  +G+ L+DMY  C  V+    
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNG-LDSNMQIGNTLIDMYAKCCCVKHMGY 405

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--VR 398
            F+ + +K +  W  +I GY QNE   EA+ LF K++ V G+  +   + SV+ AC  ++
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQ-VKGMDVDPMMIGSVLRACSGLK 464

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S  F  +  IHG+  K  L  D  +QNA++++Y  +G  + ++  F+ +  +D VSW +M
Sbjct: 465 SRNFIRE--IHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSM 521

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           IT     G   +AL L                Y L +T +  +P+SI +++ L     LS
Sbjct: 522 ITCCVHNGLPVEALELF---------------YSLKQTNI--QPDSIAIISALSATANLS 564

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L KGKEIH + IR     +  + S+LVDMYA CG +  +R++F  +  R++I W  +I 
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMIN 624

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A GMHG G E + L K M  E      V P+ +TF+AL  ACSHSG++ EG   F  MK 
Sbjct: 625 ANGMHGCGNEAIALFKKMTDE-----NVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY 679

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            Y +EP P+HYAC+VDLL R+  +E+AYQ +  MP +   +  W +LLGAC IH N E+G
Sbjct: 680 GYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIK-PSSEVWCALLGACHIHSNKELG 738

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E+AA+ L   +   +  Y L+SNI+++   W+   +VR +MK  G++K PGCSWIE  ++
Sbjct: 739 ELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNK 798

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERM-RKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           IH F+A D SH Q++ ++  L   ++ + +K GY+  T  V HNV+EEEK  +L  HSE+
Sbjct: 799 IHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSER 858

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+ +G+L TP GT+IR+ KNLR+C+DCH   K  S++  R +++RD  RFHHF+ G CS
Sbjct: 859 LALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCS 918

Query: 878 CGDYW 882
           CGD+W
Sbjct: 919 CGDFW 923



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 310/618 (50%), Gaps = 40/618 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +L     ++ L  G+Q+HA ++K      S  +A  L++MY KCGS + D  KVFD
Sbjct: 48  AHSLLLDLCVAVKALPQGQQLHARLLKSHL---SAFLATKLLHMYEKCGS-LKDAVKVFD 103

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            +TE+   +WN+M+      GK+  A+E ++ M    V   + T  SV  AC  L     
Sbjct: 104 EMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGES-- 161

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSF--EDRDLVSWNTIV 255
            RLG ++HG +++ G     F+ NAL+AMY K G +  A+ LF     E  D VSWN+I+
Sbjct: 162 -RLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S+     K LEA+   R+M   G+  +  +  + L        +  G  IH  AL+++  
Sbjct: 221 SAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF 280

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D  +V +AL+ MY  C  +E   RVF  +  +    WN +++G  QNE   +AL  F  
Sbjct: 281 AD-VYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRD 339

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M+  A   P+  ++ +++ A  RS    + + +H +AI+ GL  +  + N L+DMY++  
Sbjct: 340 MQNSAQK-PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC 398

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++     F+ M  +D +SW T+I GY     H +A+ L R++Q          V  +D 
Sbjct: 399 CVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQ----------VKGMD- 447

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                  + + + +VL  C  L +    +EIH Y  +  LA D+++ +A+V++Y + G  
Sbjct: 448 ------VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHR 500

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           ++ARR F+ +  +++++W  +I     +G   E LEL  ++     +   ++P+ +  I+
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL-----KQTNIQPDSIAIIS 555

Query: 616 LFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
             +A ++   + +G ++  + ++  + +E      + +VD+    G VE++ ++ + +  
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVKQ 613

Query: 675 EFDKAGAWSSLLGACRIH 692
                  W+S++ A  +H
Sbjct: 614 R--DLILWTSMINANGMH 629


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/875 (36%), Positives = 497/875 (56%), Gaps = 33/875 (3%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM 68
           +++ S  L +   H    T++ S+    S +     W   +R+   +  F EA+  Y E 
Sbjct: 106 SVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSET 165

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            R  +QPD + FP+V+ A AG+ D  + K IH  V+  G+G S + + N L++MY +  +
Sbjct: 166 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFG-SDLYIGNALIDMYCRF-N 223

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    KVF+ +  +D VSWNS+I+     G W+ ALE +       V P S+T+ SV  
Sbjct: 224 DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLR 283

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC  L     +  G  +HG   ++G + +  + N L++MY K   + D + +F     RD
Sbjct: 284 ACGGLG---SVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 340

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSWNT++   SQ   + E++    +M +   KPD ++I S+L AC HL  L+ GK +H 
Sbjct: 341 AVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHD 399

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           Y + +    D +   + L++MY  C  +   + VF  +  K    WN+MI  Y QN   +
Sbjct: 400 YMITSGYECDTT-ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 458

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EA+ LF  M+    + P++ T   ++    +       + +H    K+G   +  V N L
Sbjct: 459 EAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTL 516

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY++ G +  S  +F++M+ RD ++WNT+I     C    D  + LR +  M  E   
Sbjct: 517 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS---CVHSEDCNLGLRMISRMRTEG-- 571

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                         P+  T++++LP C  L+A  +GKEIH    +  L +DV VG+ L++
Sbjct: 572 ------------VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 619

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+KCG L  + +VF LM  ++V+TW  +I A GM+GEG++ +     M A G     + 
Sbjct: 620 MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG-----IV 674

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ V F+A+  ACSHSG+V EG++ F++MK DY IEP  +HYACVVDLL R+  ++ A  
Sbjct: 675 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 734

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP + D +  W +LL ACR+  + EI +  ++ +  L PD   +YVL+SN+Y++  
Sbjct: 735 FILSMPLKPD-SSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALG 793

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            WD+   +RK +K  G++K+PGCSW+E  ++++ F  G    +Q E+++  L  L+  M 
Sbjct: 794 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMA 853

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           KEGY+ +   VLH+++E+EK  +LCGHSE+LAIAFG+LNT PGT ++V KNLRVC DCH 
Sbjct: 854 KEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHT 913

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TK+ISKI  RE+++RD  RFH FK+G CSCGDYW
Sbjct: 914 VTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 317/846 (37%), Positives = 489/846 (57%), Gaps = 36/846 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   + S +R+  +   +  +++M T S + PDNF FP V+KA AG+ ++ +G  +H  V
Sbjct: 151 WNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLV 210

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK    +  V V+N LV+ YG  GS + D  +VF  + E++ VSWNSMI      G  + 
Sbjct: 211 VKTRL-VEDVFVSNALVSFYGTNGS-VSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 164 ALEAFRMMLYSNVE----PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
                  M+  + E    P   TL +V   C+   R   + +G+ VHG ++++  +    
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCA---RDREIGVGKGVHGLAMKLSLDKEVV 325

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MY+K G ++DA+ +FK   ++++VSWNT+V   S      +    LRQM   G
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385

Query: 279 --IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             ++ D V+I + +P C    +L   KE+H Y+L+ + + +N  V +A V  Y  C  + 
Sbjct: 386 GDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLS 445

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              RVF  I  K +  WNA+I GY Q+     +L  + +M+  +GL P+  T+ S++ AC
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS-SGLLPDLFTVCSLLSAC 504

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            + ++    + +HG  I+  L RD +V  +L+ +Y   G +  +  +FD ME +  VSWN
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           TM+ GY   G    AL L R+M                  +   +P  I++M+V   C  
Sbjct: 565 TMVNGYLQNGFPERALSLFRQM-----------------VLYGVQPCEISMMSVFGACSL 607

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L +L  G+E H YA++ +L  +  +  +++DMYAK G +  + +VF+ +  R+V +WN +
Sbjct: 608 LPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAM 667

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           +M YG+HG  +E ++L + M     R G   P+E+TF+ +  AC+HSG+V EG+    +M
Sbjct: 668 VMGYGIHGRAKEAIKLFEEM----QRTGHC-PDELTFLGVLTACNHSGLVHEGLTYLDQM 722

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           K  +G+ P+  HYACV+D+L RAGK+++A ++      E    G W+ LL +CRIH+N+E
Sbjct: 723 KTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLE 782

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +GE  A  LF+ EP+   +YVLLSN+Y+ +  WD+   VR++MKEM +RK+ GCSWIE  
Sbjct: 783 MGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELN 842

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
            ++  F+AG+ S    E++      L   + K GY PDTS V H+++EEEK   L GHSE
Sbjct: 843 GKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSE 902

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLAI +G++ T  GTT+RV KNLR+C DCH A K ISK+  REI++RD +RFHHFKNG C
Sbjct: 903 KLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFC 962

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 963 SCGDYW 968



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 295/616 (47%), Gaps = 50/616 (8%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           +D+ LG++IH  V +     +   +   ++ MY  CGS   D   VFD + +K+   WN+
Sbjct: 95  KDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPD-DSRSVFDALRKKNLFQWNA 153

Query: 151 MIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           +I++  R   +   LE F +M+  S + P +FT   V  AC+ +S    +++G  VHG  
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSE---VQVGLAVHGLV 210

Query: 210 L--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           +  R+ E + F+ NAL++ Y   G V DA  +FK   +R+LVSWN+++   S N    E 
Sbjct: 211 VKTRLVE-DVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEEC 269

Query: 268 VMFLRQMALR----GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
            + L QM  +       PD  ++A+VLP C+    +  GK +H  A++   L     V +
Sbjct: 270 FLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLS-LDKEVVVNN 328

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG-L 382
           AL+DMY  C  +   + +F   ++K +  WN M+ G+       +   L  +M    G L
Sbjct: 329 ALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDL 388

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISK 441
             +  T+ + VP C      P+ + +H +++K   +  +  V NA +  Y++ G +  + 
Sbjct: 389 RADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAH 448

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F  +  +   SWN +I GY+   Q  D  + L     M+                   
Sbjct: 449 RVFCSIRSKTVNSWNALIGGYS---QSSDPRLSLDAYFQMKSSG--------------LL 491

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+  T+ ++L  C  + +L  GKE+H   IRN L  D  V  +L+ +Y  CG L+ A  +
Sbjct: 492 PDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVL 551

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD M  + +++WN ++  Y  +G  +  L L + MV  G     V+P E++ +++F ACS
Sbjct: 552 FDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG-----VQPCEISMMSVFGACS 606

Query: 622 -----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
                  G  + G  L   ++D+  I  S      V+D+  + G V +++++ N +    
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACS------VIDMYAKNGSVMESFKVFNGLKER- 659

Query: 677 DKAGAWSSLLGACRIH 692
               +W++++    IH
Sbjct: 660 -SVASWNAMVMGYGIH 674



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 245/487 (50%), Gaps = 33/487 (6%)

Query: 195 RRDGLRLGRQVH---GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           RR  ++LGR++H     S R+   +  +   ++ MY+  G  DD++++F +   ++L  W
Sbjct: 93  RRKDIQLGRKIHQLVSESARLSN-DDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151

Query: 252 NTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           N ++SS S+N+ +   + MF++ +   G+ PD  +   V+ AC+ +  +  G  +H   +
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +   L+++ FV +ALV  Y     V    RVF  + ++ +  WN+MI  +  N   EE  
Sbjct: 212 KTR-LVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECF 270

Query: 371 MLFIKM----EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           +L  +M    +E+A   P+  T+++V+P C R       +G+HG A+KL L ++  V NA
Sbjct: 271 LLLGQMMEKDDEIA-FTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNA 329

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           LMDMYS+ G I  ++ IF     ++ VSWNTM+ G++  G       LLR+M        
Sbjct: 330 LMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQML------- 382

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSAL 545
                DL       + + +T++  +P C   S L   KE+H Y+++   +  + +V +A 
Sbjct: 383 -AGGGDL-------RADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAF 434

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           V  YAKCG L++A RVF  +  + V +WN +I  Y    + +  L+    M + G     
Sbjct: 435 VASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSG----- 489

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + P+  T  +L +ACS    +  G ++ + +     +E     Y  ++ L    G++  A
Sbjct: 490 LLPDLFTVCSLLSACSQIKSLKLGKEV-HGLIIRNRLERDSFVYISLLSLYIHCGELSTA 548

Query: 666 YQLINMM 672
           + L + M
Sbjct: 549 HVLFDAM 555



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 145/266 (54%), Gaps = 6/266 (2%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +++   SW   +   ++S+  R ++ +Y +M  S + PD F   ++L A + I+ L LGK
Sbjct: 455 RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGK 514

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++H  +++      S  V  +L+++Y  CG ++   + +FD + +K  VSWN+M+    +
Sbjct: 515 EVHGLIIRNRLERDSF-VYISLLSLYIHCG-ELSTAHVLFDAMEDKTLVSWNTMVNGYLQ 572

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWN 216
            G  + AL  FR M+   V+P   +++SV  ACS L     LRLGR+ HG +L+ + E N
Sbjct: 573 NGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLP---SLRLGREAHGYALKCLLEDN 629

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            FI  +++ MYAK G V ++  +F   ++R + SWN +V     + +  EA+    +M  
Sbjct: 630 AFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQR 689

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
            G  PD ++   VL AC+H  ++  G
Sbjct: 690 TGHCPDELTFLGVLTACNHSGLVHEG 715


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 310/737 (42%), Positives = 443/737 (60%), Gaps = 38/737 (5%)

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           M+    +    D AL  F  M + +V P  +    +   C + S    L+ G+++HG+ +
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNS---DLKRGKEIHGSVI 57

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
             G  WN F M  ++ MYAK  +++DA  +F    +RDLV WNT++S  +QN     A+M
Sbjct: 58  TSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALM 117

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVD 327
            + +M+  G +PD ++I S+LPA +   +L  G  +H Y LR     L++   V +ALVD
Sbjct: 118 LVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVN---VSTALVD 174

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  V   R +FD +  + +  WN+MI GY Q+   E A+++F KM +  G+ P   
Sbjct: 175 MYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD-EGVQPTNV 233

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T+   + AC         + +H    +L L  D  V N+L+ MYS+  R++I+  IF ++
Sbjct: 234 TVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNL 293

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +  VSWN MI GY   G   +AL    EMQ+      RN            KP+S T+
Sbjct: 294 RNKTLVSWNAMILGYAQNGCVNEALNAFCEMQS------RN-----------IKPDSFTM 336

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           ++V+P    LS   + K IH   IR  L  +V V +ALVDMYAKCG ++ AR++FD+M  
Sbjct: 337 VSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNA 396

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+VITWN +I  YG HG G+  +EL K M     + G +KPN++TF+   +ACSHSG+V 
Sbjct: 397 RHVITWNAMIDGYGTHGLGKTSVELFKEM-----KKGTIKPNDITFLCALSACSHSGLVE 451

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSL 685
           EG+  F  MK DYGIEP+ DHY  +VDLLGRAG++  A+  I  MP  P     GA   +
Sbjct: 452 EGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA---M 508

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGAC+IH+NV++GE AA  +F L PD   ++VLL+NIY++A +W K   VR  M++ G++
Sbjct: 509 LGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQ 568

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           K PGCS +E G+E+H F +G  SH QS++++ +LE L + +R  GYVPDT+ + H+V ++
Sbjct: 569 KTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDD 627

Query: 806 EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
            K  LL  HSEKLAIAFG+LNT  GT I + KNLRVC DCH ATK+IS +  REII+RD+
Sbjct: 628 VKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDM 687

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFH FK+G CSCGDYW
Sbjct: 688 HRFHLFKDGVCSCGDYW 704



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 262/528 (49%), Gaps = 30/528 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+S+    A+  +  M    ++P  + F  +LK      DL  GK+IH  V+  G+
Sbjct: 2   LKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGF 61

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             +   +   +VNMY KC   + D Y +FDR+ E+D V WN+MI+   + G   +AL   
Sbjct: 62  SWNLFAMTG-VVNMYAKC-RQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
             M      P S T+VS+  A ++      LR+G  VHG  LR G E    +  AL+ MY
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRL---LRIGMAVHGYVLRAGFESLVNVSTALVDMY 176

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           +K G V  A+ +F   + R +VSWN+++    Q+     A++  ++M   G++P  V++ 
Sbjct: 177 SKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVM 236

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFIS 346
             L AC+ L  L+ GK +H   L + + +D+   V ++L+ MY  C+ V+    +F  + 
Sbjct: 237 GALHACADLGDLERGKFVH--KLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR 294

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K +  WNAMI GY QN    EAL  F +M+    + P++ TM SV+PA          +
Sbjct: 295 NKTLVSWNAMILGYAQNGCVNEALNAFCEMQS-RNIKPDSFTMVSVIPALAELSIPRQAK 353

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IHG  I+  L ++ +V  AL+DMY++ G I  ++ +FD M  R  ++WN MI GY   G
Sbjct: 354 WIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHG 413

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
               ++ L +EM+                T+   KPN IT +  L  C + S L +    
Sbjct: 414 LGKTSVELFKEMKK--------------GTI---KPNDITFLCALSAC-SHSGLVEEGLC 455

Query: 527 HAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              +++     +  +    A+VD+  + G LN A      MP++  IT
Sbjct: 456 FFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 222/417 (53%), Gaps = 19/417 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A++   + A++  + M+    +PD+    ++L AVA  + L +G  +H +V+
Sbjct: 99  WNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVL 158

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+  S V V+  LV+MY KCGS +     +FD +  +  VSWNSMI    + G  + A
Sbjct: 159 RAGFE-SLVNVSTALVDMYSKCGS-VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGA 216

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNA 222
           +  F+ ML   V+P++ T++    AC++L     L  G+ VH   + L++ + +  +MN+
Sbjct: 217 MLIFQKMLDEGVQPTNVTVMGALHACADLG---DLERGKFVHKLVDQLKL-DSDVSVMNS 272

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY+K  RVD A  +FK+  ++ LVSWN ++   +QN    EA+    +M  R IKPD
Sbjct: 273 LISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPD 332

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++ SV+PA + L +    K IH   +R   L  N FV +ALVDMY  C  +   R++F
Sbjct: 333 SFTMVSVIPALAELSIPRQAKWIHGLVIRR-FLDKNVFVMTALVDMYAKCGAIHTARKLF 391

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D ++ + +  WNAMI GYG +   + ++ LF +M++   + PN  T    + AC  S   
Sbjct: 392 DMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKK-GTIKPNDITFLCALSACSHSGLV 450

Query: 403 PDKEGI-HGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             +EG+    ++K   G     D Y   A++D+  R GR+  +      M ++  ++
Sbjct: 451 --EEGLCFFESMKKDYGIEPTMDHY--GAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 8/269 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +    +S     A+L + +M    +QP N      L A A + DL  
Sbjct: 191 GMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLER 250

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIAT 154
           GK +H  V +     S V+V N+L++MY KC   D+     +F  +  K  VSWN+MI  
Sbjct: 251 GKFVHKLVDQLKLD-SDVSVMNSLISMYSKCKRVDI--AADIFKNLRNKTLVSWNAMILG 307

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVG 213
             + G  + AL AF  M   N++P SFT+VSV  A + LS     R  + +HG  + R  
Sbjct: 308 YAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIP---RQAKWIHGLVIRRFL 364

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           + N F+M AL+ MYAK G +  A+ LF     R +++WN ++     +     +V   ++
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTG 302
           M    IKP+ ++    L ACSH  +++ G
Sbjct: 425 MKKGTIKPNDITFLCALSACSHSGLVEEG 453


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 318/859 (37%), Positives = 487/859 (56%), Gaps = 43/859 (5%)

Query: 34  LPGSQTR--------CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLK 85
           LPGS  R        C  SW   + + + +   R+A+ ++  M    ++ + F  P VLK
Sbjct: 52  LPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK 111

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-TEKD 144
                 D   G Q+HA  +  G G   + VAN LV MYG  G  + +   VFD    E++
Sbjct: 112 CA---PDAGFGTQLHALAMATGLG-GDIFVANALVAMYGGFGF-VDEARMVFDEAGCERN 166

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
            VSWN +++   +  +   A++ F  M++  V+P+ F    V  AC+    RD L  GR+
Sbjct: 167 TVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTG--SRD-LEAGRK 223

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           VH   +R G + + F  NAL+ MY+KLG +  A  +F    + D+VSWN  +S    +  
Sbjct: 224 VHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGH 283

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
              A+  L QM   G+ P+  +++S+L AC+     + G++IH + ++ +   DN ++  
Sbjct: 284 DQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDN-YIAF 342

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
            LVDMY     ++  ++VFD+I  + + LWNA+I+G        EAL LF +M +  G  
Sbjct: 343 GLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRK-EGFD 401

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
            N TT+++V+ +    EA  D   +H  A KLG   D +V N L+D Y +   +  +  +
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+     D +++ +MIT  + C    DA+ L  EM              LD       P+
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRK----------GLD-------PD 504

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
              L ++L  C +LSA  +GK++HA+ I+    +DV  G+ALV  YAKCG +  A   F 
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFS 564

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            +P + V++W+ +I     HG G+  L++   MV E      + PN +T  ++  AC+H+
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDE-----HISPNHITMTSVLCACNHA 619

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G+V E    F  MK+ +GIE + +HYAC++DLLGRAGK++DA +L+N MP + + A  W 
Sbjct: 620 GLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTN-AAVWG 678

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           +LL A R+H++ E+G +AA+ LF+LEP+ +  +VLL+N Y+SA +WD    VRK MK+  
Sbjct: 679 ALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSK 738

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           V+KEP  SW+E  D++H F+ GD SH ++  ++  L+ L + M K GYVP+    LH+V+
Sbjct: 739 VKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVD 798

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           + EKE LL  HSE+LA+AF +++TP G  IRV KNLR+C DCH A KFIS I SREII+R
Sbjct: 799 KNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIR 858

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D+ RFHHF++G CSC DYW
Sbjct: 859 DINRFHHFRDGACSCRDYW 877



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 195/673 (28%), Positives = 332/673 (49%), Gaps = 60/673 (8%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC---GSDMWDVYKVFDR 139
           +L   A  Q L  G  IHAH++K G         N L++ Y KC   GS      +VFD 
Sbjct: 10  LLTRYAATQSLLQGAHIHAHLLKSGL---FAVFRNHLLSFYSKCRLPGS----ARRVFDE 62

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I +   VSW+S++           AL AFR M   +V  + F L  V L C+        
Sbjct: 63  IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVL-PVVLKCA-----PDA 116

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSS 257
             G Q+H  ++  G   + F+ NAL+AMY   G VD+A+ +F ++  +R+ VSWN ++S+
Sbjct: 117 GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +ND+   AV    +M   G++P+    + V+ AC+    L+ G+++HA  +R     D
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             F  +ALVDMY    ++     VF  + +  +  WNA I+G   + +D+ AL L ++M+
Sbjct: 237 -VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMK 295

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             +GL PN  T+SS++ AC  S AF     IHG  +K     D Y+   L+DMY++ G +
Sbjct: 296 S-SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + +K +FD +  RD V WN +I+G +   QH +AL L   M        R   +D++ T 
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRM--------RKEGFDVNRT- 405

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
                   TL  VL    +L A++  +++HA A +    +D  V + L+D Y KC CLN+
Sbjct: 406 --------TLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNY 457

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A RVF+     ++I +  +I A      G++ ++L   M+ +G     + P+     +L 
Sbjct: 458 AYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-----LDPDPFVLSSLL 512

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPP 674
            AC+      +G  +  + +K  +      D +A   +V    + G +EDA    + +P 
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQF----MSDVFAGNALVYTYAKCGSIEDADLAFSGLPE 568

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQLW 729
           +     +WS+++G    H + +     A ++F  +++  ++ +++ ++++  +   A L 
Sbjct: 569 K--GVVSWSAMIGGLAQHGHGK----RALDVFHRMVDEHISPNHITMTSVLCACNHAGLV 622

Query: 730 DKAMDVRKKMKEM 742
           D+A      MKEM
Sbjct: 623 DEAKRYFNSMKEM 635



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 186/408 (45%), Gaps = 37/408 (9%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +I  +L   +  + L  G  IHA+ L++ +    +   + L+  Y  CR     RRVFD 
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF---AVFRNHLLSFYSKCRLPGSARRVFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I D     W++++T Y  N    +AL  F  M   + +  N   +  VV  C     F  
Sbjct: 63  IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCS-VRCNEFVL-PVVLKCAPDAGFGT 120

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYT 463
           +  +H  A+  GLG D +V NAL+ MY   G ++ ++ +FD+    R+TVSWN +++ Y 
Sbjct: 121 Q--LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              +   A+ +  EM           V+         +PN      V+  C     L  G
Sbjct: 179 KNDRCSHAVKVFGEM-----------VWG------GVQPNEFGFSCVVNACTGSRDLEAG 221

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           +++HA  IR     DV   +ALVDMY+K G +  A  VF  +P  +V++WN  I    +H
Sbjct: 222 RKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLH 281

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G  Q  LELL  M + G     + PN  T  ++  AC+ SG  + G  +   M       
Sbjct: 282 GHDQHALELLLQMKSSG-----LVPNVFTLSSILKACAGSGAFNLGRQIHGFM---VKAN 333

Query: 644 PSPDHYAC--VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              D+Y    +VD+  + G ++DA ++ + +P        W++L+  C
Sbjct: 334 ADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR--DLVLWNALISGC 379


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/767 (40%), Positives = 461/767 (60%), Gaps = 35/767 (4%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+++ + GS + +  +VF+ I +K  V + +M+    +    D AL+ F  M    VEP
Sbjct: 75  LVSLFCRYGS-VDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEP 133

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             +    +   C + +    LR+G+++HG  ++ G   + F M  L  MYAK  +V +A+
Sbjct: 134 VVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEAR 190

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F    +RDLVSWNTIV+  SQN     A+  +  M    +KP  ++I SVLPA S L 
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALR 250

Query: 298 MLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           ++  GKEIH YA+R   D L++   + +ALVDMY  C  ++  R +FD + ++ +  WN+
Sbjct: 251 LIRIGKEIHGYAMRAGFDSLVN---IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNS 307

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MI  Y QNE  +EA+++F KM +  G+ P   ++   + AC           IH  +++L
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
            L R+  V N+L+ MY +   ++ + ++F  ++ R  VSWN MI G+   G+  +AL   
Sbjct: 367 ELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYF 426

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +MQ                TV   KP++ T ++V+     LS     K IH   +RN L
Sbjct: 427 SQMQA--------------RTV---KPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCL 469

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V V +ALVDMYAKCG +  AR +FD+M  R+V TWN +I  YG HG G+  LEL + 
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEE 529

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M     + G ++PN VTF+++ +ACSHSG+V  G+  F+ MK++Y IEPS DHY  +VDL
Sbjct: 530 M-----QKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDL 584

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG++ +A+  I  MP +      + ++LGAC+IH+NV   E  A+ LF L P+   +
Sbjct: 585 LGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGY 643

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           +VLL+NIY +A +W+K   VR  M   G+RK PGCS +E  +E+H F +G  +H  S+++
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKI 703

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           + FLE L  ++++ GYVPDT+ +L  + ++ KE LL  HSEKLAI+FG+LNT  GTTI V
Sbjct: 704 YAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHV 762

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC DCH ATK+IS +  REII+RD++RFHHFKNG CSCGDYW
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 170/525 (32%), Positives = 272/525 (51%), Gaps = 26/525 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L+  A+ +   +A+  ++ M   +++P  + F  +LK      +L +GK+IH  +VK G+
Sbjct: 107 LKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L    +   L NMY KC   + +  KVFDR+ E+D VSWN+++A   + G   +ALE  
Sbjct: 167 SLDLFAMTG-LENMYAKC-RQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
            +M   N++PS  T+VSV  A S L     +R+G+++HG ++R G +    I  AL+ MY
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRL---IRIGKEIHGYAMRAGFDSLVNIATALVDMY 281

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK G +  A+ LF    +R++VSWN+++ +  QN+   EA++  ++M   G+KP  VS+ 
Sbjct: 282 AKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
             L AC+ L  L+ G+ IH  ++  ++  + S V S L+ MYC C+EV+    +F  +  
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELELDRNVSVVNS-LISMYCKCKEVDTAASMFGKLQS 400

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + I  WNAMI G+ QN    EAL  F +M +   + P+  T  SV+ A          + 
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQM-QARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IHG  ++  L ++ +V  AL+DMY++ G I I++ IFD M  R   +WN MI GY   G 
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGI 519

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEI 526
              AL L  EMQ                T+   +PN +T ++V+  C     +  G K  
Sbjct: 520 GKAALELFEEMQK--------------GTI---RPNGVTFLSVISACSHSGLVEAGLKCF 562

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           H       +   +    A+VD+  + G LN A      MPV+  +
Sbjct: 563 HMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 217/415 (52%), Gaps = 13/415 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++   R A+     M   +++P      +VL AV+ ++ + +GK+IH + 
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYA 262

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  S V +A  LV+MY KCGS +     +FD + E++ VSWNSMI    +      
Sbjct: 263 MRAGFD-SLVNIATALVDMYAKCGS-LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F+ ML   V+P+  +++    AC++L     L  GR +H  S+ +  + N  ++N+
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLG---DLERGRFIHKLSVELELDRNVSVVNS 377

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY K   VD A ++F   + R +VSWN ++   +QN + +EA+ +  QM  R +KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPD 437

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SV+ A + L +    K IH   +RN  L  N FV +ALVDMY  C  +   R +F
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRN-CLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS--- 399
           D +S++ +  WNAMI GYG +   + AL LF +M++   + PN  T  SV+ AC  S   
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK-GTIRPNGVTFLSVISACSHSGLV 555

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           EA      +      +    D Y   A++D+  R GR+  +      M V+  V+
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHY--GAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 138/295 (46%), Gaps = 27/295 (9%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            K GL ++   Q  L+ ++ R G ++ +  +F+ ++ +  V + TM+ G+        AL
Sbjct: 61  FKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKAL 120

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
                M++ E E                 P       +L  CG  + L  GKEIH   ++
Sbjct: 121 KFFVRMRDDEVE-----------------PVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           +  + D+   + L +MYAKC  ++ AR+VFD MP R++++WN I+  Y  +G  +  LE+
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC 651
           +  M  E      +KP+ +T +++  A S   ++  G ++  Y M+   G +   +    
Sbjct: 224 VNLMCEEN-----LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRA--GFDSLVNIATA 276

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +VD+  + G ++ A  L + M        +W+S++ A   ++N +   +  Q + 
Sbjct: 277 LVDMYAKCGSLKTARLLFDGMLER--NVVSWNSMIDAYVQNENPKEAMVIFQKML 329



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 2/155 (1%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q+R   SW   +   A++ +  EA+  + +M    ++PD F + +V+ A+A +      K
Sbjct: 399 QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK 458

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IH  V++      +V V   LV+MY KCG+ M     +FD ++E+   +WN+MI     
Sbjct: 459 WIHGVVMRNCLD-KNVFVTTALVDMYAKCGAIMI-ARLIFDMMSERHVTTWNAMIDGYGT 516

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            G    ALE F  M    + P+  T +SV  ACS+
Sbjct: 517 HGIGKAALELFEEMQKGTIRPNGVTFLSVISACSH 551


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/823 (38%), Positives = 480/823 (58%), Gaps = 31/823 (3%)

Query: 61   AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
            A+  + EM R  ++ + F +   LKA +   DL  GKQ+HA  +K G   S + V + LV
Sbjct: 213  AVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVG-DFSDLFVGSALV 271

Query: 121  NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            ++Y KCG +M    +VF  + +++ VSWN+++    + G  +  L  F  M  S +  S 
Sbjct: 272  DLYAKCG-EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSK 330

Query: 181  FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            FTL +V   C+N      LR G+ VH  ++R+G E + FI   L+ MY+K G   DA  +
Sbjct: 331  FTLSTVLKGCAN---SGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKV 387

Query: 240  FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            F   ED D+VSW+ I++ L Q  +  EA    ++M   G+ P+  ++AS++ A + L  L
Sbjct: 388  FVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDL 447

Query: 300  DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              G+ IHA   +     DN+ V +ALV MY     V+ G RVF+  +++ +  WNA+++G
Sbjct: 448  YYGESIHACVCKYGFEYDNT-VCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSG 506

Query: 360  YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
            +  NE  +  L +F +M    G  PN  T  S++ +C         + +H   +K  L  
Sbjct: 507  FHDNETCDTGLRIFNQML-AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 565

Query: 420  DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
            + +V  AL+DMY++   +E ++TIF+ +  RD  +W  ++ GY   GQ   A+    +MQ
Sbjct: 566  NDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 625

Query: 480  NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                   R  V          KPN  TL + L GC  ++ L  G+++H+ AI+   + D+
Sbjct: 626  -------REGV----------KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDM 668

Query: 540  VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
             V SALVDMYAKCGC+  A  VFD +  R+ ++WN II  Y  HG+G + L+  + M+ E
Sbjct: 669  FVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDE 728

Query: 600  GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
            G+      P+EVTFI + +ACSH G++ EG   F  +   YGI P+ +HYAC+VD+LGRA
Sbjct: 729  GT-----VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRA 783

Query: 660  GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
            GK  +    I  M         W ++LGAC++H N+E GE AA  LF LEP++ S+Y+LL
Sbjct: 784  GKFHEVESFIEEMKLT-SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842

Query: 720  SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
            SN++++  +WD   +VR  M   GV+KEPGCSW+E   ++H FL+ DGSH +  ++H  L
Sbjct: 843  SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKL 902

Query: 780  ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
            ++L +++   GY P+T  VLHNV++ EK+ LL  HSE+LA+AF +L+T    TIR+ KNL
Sbjct: 903  QDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNL 962

Query: 840  RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            R+C DCH   K IS+I ++E+++RD+  FHHFKNG+CSC ++W
Sbjct: 963  RICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 180/587 (30%), Positives = 286/587 (48%), Gaps = 31/587 (5%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +L+  A   DL+ GK IH  V+K G    S  + N+LVN+Y KCGS  +   KVF  
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDS-HLWNSLVNVYAKCGSANY-ACKVFGE 188

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I E+D VSW ++I      G    A+  F  M    VE + FT  +   ACS       L
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCL---DL 245

Query: 200 RLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+QVH  +++VG++ + F+ +AL+ +YAK G +  A+ +F     ++ VSWN +++  
Sbjct: 246 EFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGF 305

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q     + +    +M    I     ++++VL  C++   L  G+ +H+ A+R    +D 
Sbjct: 306 AQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELD- 364

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F+   LVDMY  C       +VF  I D  +  W+A+IT   Q     EA  +F +M  
Sbjct: 365 EFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            +G+ PN  T++S+V A          E IH    K G   D  V NAL+ MY ++G ++
Sbjct: 425 -SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
               +F+    RD +SWN +++G+         L +  +M  + E  N            
Sbjct: 484 DGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM--LAEGFN------------ 529

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              PN  T +++L  C +LS +  GK++HA  ++N L  +  VG+ALVDMYAK   L  A
Sbjct: 530 ---PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 586

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             +F+ +  R++  W VI+  Y   G+G++ ++    M  EG     VKPNE T  +  +
Sbjct: 587 ETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-----VKPNEFTLASSLS 641

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
            CS    +  G  L + M    G        + +VD+  + G VEDA
Sbjct: 642 GCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687



 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 26/475 (5%)

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L  G+ +HG  ++ G   ++ + N+L+ +YAK G  + A  +F    +RD+VSW  +++ 
Sbjct: 144 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 203

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
                    AV    +M   G++ +  + A+ L ACS    L+ GK++HA A++     D
Sbjct: 204 FVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSD 263

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             FVGSALVD+Y  C E+    RVF  +  +    WNA++ G+ Q    E+ L LF +M 
Sbjct: 264 -LFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT 322

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             + +  +  T+S+V+  C  S      + +H  AI++G   D ++   L+DMYS+ G  
Sbjct: 323 G-SEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLA 381

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             +  +F  +E  D VSW+ +IT     GQ  +A  + + M++                V
Sbjct: 382 GDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH--------------SGV 427

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           +   PN  TL +++     L  L  G+ IHA   +     D  V +ALV MY K G +  
Sbjct: 428 I---PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQD 484

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
             RVF+    R++I+WN ++  +  +      L +   M+AEG       PN  TFI++ 
Sbjct: 485 GCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEG-----FNPNMYTFISIL 539

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            +CS    V  G  +  ++  +  ++ +      +VD+  +   +EDA  + N +
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 27/298 (9%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           S ++  C       + + IHG  IK G+  D ++ N+L+++Y++ G    +  +F ++  
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD VSW  +ITG+   G    A+ L  EM+       R  V          + N  T  T
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMR-------REGV----------EANEFTYAT 234

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
            L  C     L  GK++HA AI+    +D+ VGSALVD+YAKCG +  A RVF  MP +N
Sbjct: 235 ALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQN 294

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            ++WN ++  +   G+ ++VL L   M      G E+  ++ T   +   C++SG +  G
Sbjct: 295 AVSWNALLNGFAQMGDAEKVLNLFCRMT-----GSEINFSKFTLSTVLKGCANSGNLRAG 349

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL-INMMPPEFDKAGAWSSLL 686
             + + +    G E       C+VD+  + G   DA ++ + +  P+     +WS+++
Sbjct: 350 -QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD---VVSWSAII 403


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 326/845 (38%), Positives = 501/845 (59%), Gaps = 39/845 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +   + ++ EAI  Y EM    +  D F FP VLKA    ++  LG +IH   
Sbjct: 115 TWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVA 174

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR-ITEKDQ-VSWNSMIATLCRFGKW 161
           VK GYG   V V N L+ MY KCG D+     +FD  + EKD  VSWNS+I+     G+ 
Sbjct: 175 VKCGYG-GFVFVCNALIAMYAKCG-DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIM 220
             AL  FR M    VE +++T VS   AC   +    +++GR +H   L+   + + ++ 
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTF---IKIGRGIHAVILKSNHFTDVYVS 289

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NAL+AMYA  G+++DA+ +FKS   +D VSWNT++S + QND + +A+   + M   G K
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD VS+ +++ A      L  G E+HAYA+++ I   N  +G++L+DMY  C  V+    
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGI-DSNMHIGNSLIDMYGKCCCVKYMGS 408

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--VR 398
            F+++ +K +  W  +I GY QNE   +AL L  K++ +  +  +   + S++ AC  ++
Sbjct: 409 AFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ-LEKMDVDPMMIGSILLACSGLK 467

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           SE    +  IHG+ +K GL  D  +QNA++++Y  +  ++ ++ +F+ +  +D VSW +M
Sbjct: 468 SEKLIKE--IHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSM 524

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           IT    C  +G A+  L    ++ E     N+          +P+ ITL++VL    ALS
Sbjct: 525 IT---CCVHNGLAIEALELFNSLIE----TNI----------EPDLITLVSVLYAAAALS 567

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L KGKEIH + IR     + ++ ++LVDMYA+CG +  AR +F+ +  R++I W  +I 
Sbjct: 568 SLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMIN 627

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A GMHG G++ ++L   M  E      V P+ +TF+AL  ACSHSG+V EG   F  MK+
Sbjct: 628 ANGMHGCGKDAIDLFSKMTDEN-----VLPDHITFLALLYACSHSGLVVEGKQHFEIMKN 682

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           +Y +EP P+HYAC+VDLL R+  +E+AY  +  MP E   A  W +LLGACRIH N ++G
Sbjct: 683 EYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIE-PSAEVWCALLGACRIHSNNDLG 741

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E+AA+ L  L  + + +YVL+SN +++   W+   +VR  MK   ++K+PGCSWIE  ++
Sbjct: 742 EVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENK 801

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMR-KEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           IH F+A D SH Q   ++  L   ++ ++ K GY   T  V H+V EEEK  +L GHSE+
Sbjct: 802 IHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSER 861

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+ +G+L T  GT +R+ KNLR+C+DCH   K  S+I  R +++RD  RFHHF+ G CS
Sbjct: 862 LALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCS 921

Query: 878 CGDYW 882
           CGD+W
Sbjct: 922 CGDFW 926



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 327/622 (52%), Gaps = 37/622 (5%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P   A+   L+  A  + L  G+Q+HAH +K    L SV +    V+MYGKCGS  +D  
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGS-FYDAV 102

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVFD+++E+   +WN+MI      G++  A+E ++ M    V   +FT   V  AC    
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162

Query: 195 RRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSW 251
            R   RLG ++HG +++ G     F+ NAL+AMYAK G +  A+ LF S   E  D VSW
Sbjct: 163 ER---RLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSW 219

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+I+S+     + LEA+   R+M   G++ +  +  S L AC     +  G+ IHA  L+
Sbjct: 220 NSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILK 279

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           ++   D  +V +AL+ MY NC ++E   RVF  +  K    WN +++G  QN+   +A+ 
Sbjct: 280 SNHFTD-VYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
            F  M++ +G  P+  ++ +++ A  RS        +H +AIK G+  + ++ N+L+DMY
Sbjct: 339 HFQDMQD-SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMY 397

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            +   ++   + F+ M  +D +SW T+I GY     H DAL LLR++Q            
Sbjct: 398 GKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ------------ 445

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            L++  + P    + + ++L  C  L +    KEIH Y ++  LA D+++ +A+V++Y +
Sbjct: 446 -LEKMDVDP----MMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGE 499

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
              +++AR VF+ +  +++++W  +I     +G   E LEL  +++        ++P+ +
Sbjct: 500 LALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETN-----IEPDLI 554

Query: 612 TFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           T +++  A +    + +G ++  + ++  + +E    +   +VD+  R G +E+A  + N
Sbjct: 555 TLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFN 612

Query: 671 MMPPEFDKAGAWSSLLGACRIH 692
            +         W+S++ A  +H
Sbjct: 613 YVKQR--DLILWTSMINANGMH 632



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 164/632 (25%), Positives = 294/632 (46%), Gaps = 77/632 (12%)

Query: 154 TLCRFGKWDLAL-EAFRMMLYSNVEP----SSFTLV-SVALACSNLSRRDGLRLGRQVHG 207
           TL  F    ++L EAF+ + +   +P    + F L  + + A    +    L  G+Q+H 
Sbjct: 11  TLPTFSHRPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHA 70

Query: 208 NSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           + L+   +  + F+    + MY K G   DA  +F    +R + +WN ++ +     +++
Sbjct: 71  HFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYV 130

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+   ++M + G+  D  +   VL AC   +    G EIH  A++        FV +AL
Sbjct: 131 EAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCG-YGGFVFVCNAL 189

Query: 326 VDMYCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           + MY  C ++   R +FD   +       WN++I+ +       EAL LF +M+EV G+ 
Sbjct: 190 IAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEV-GVE 248

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
            N  T  S + AC          GIH   +K     D YV NAL+ MY+  G++E ++ +
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F  M  +D VSWNT+++G      + DA+   ++MQ+  +                 KP+
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ-----------------KPD 351

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
            ++++ ++   G  + L  G E+HAYAI++ + +++ +G++L+DMY KC C+ +    F+
Sbjct: 352 QVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFE 411

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            MP +++I+W  II  Y  +    + L LL+ +  E     +V P  +  I L  AC  S
Sbjct: 412 YMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKM---DVDPMMIGSILL--AC--S 464

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDH-----YACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           G+ SE +     +K+ +G               +V++ G    V+ A  +   +  +   
Sbjct: 465 GLKSEKL-----IKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSK--D 517

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFL---LEPDVASHYVLLSNIYSSAQLWDKAMDV 735
             +W+S++  C +H  + I  +   N  +   +EPD+ +   L+S +Y++A L       
Sbjct: 518 IVSWTSMITCC-VHNGLAIEALELFNSLIETNIEPDLIT---LVSVLYAAAAL------- 566

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
                          S ++ G EIH FL   G
Sbjct: 567 ---------------SSLKKGKEIHGFLIRKG 583


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 321/883 (36%), Positives = 486/883 (55%), Gaps = 37/883 (4%)

Query: 3   SSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAI 62
           +S   L+++ S  L S         ++ S+    S T     W   +R+   +  F +A+
Sbjct: 47  TSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQAL 106

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
             Y EM    +QPD F FP+V+ + A I DL LG  +H H ++ G+  S + + N L++M
Sbjct: 107 GYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE-SDLYIGNALIDM 165

Query: 123 YGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           Y +   D+ +   VF+ ++ +D VSWNS+I+  C  G W+ AL+ +     + + P  FT
Sbjct: 166 YSRF-VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFT 224

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           + SV LAC +L     ++ G  VHG   ++G   +  I N L++MY K  R+ +A+ +F 
Sbjct: 225 MSSVLLACGSLM---AVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               +D V+WNT++   +Q  +   +V     M + G  PD +SI S + AC     L  
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQV 340

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK +H Y + +    D +   + L+DMY  C ++   + VFD    K    WN++I GY 
Sbjct: 341 GKFVHKYLIGSGFECD-TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399

Query: 362 QNEYDEEALMLF--IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Q+ Y +E L  F  +KME      P++ T   ++    +        GIH   IK G   
Sbjct: 400 QSGYYKEGLESFKMMKMERK----PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEA 455

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           +  + N+L+D+Y++ G ++    +F  M   D +SWNT+I              ++ EM+
Sbjct: 456 ELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMR 515

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                          E ++   P+  T++ +LP C  L+   +GKEIH Y  ++   ++V
Sbjct: 516 T--------------EGLM---PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNV 558

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            +G+AL++MY+KCG L    +VF  M  ++V+TW  +I A+GM+GEG++ L+  ++M   
Sbjct: 559 PIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELS 618

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     V P+ V FIA   ACSHSGMV EG+  F +MK DY +EP  +HYACVVDLL R+
Sbjct: 619 G-----VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARS 673

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G +  A + I  MP + D A  W +LL ACR   N  I +  ++ +  L  D   +YVL+
Sbjct: 674 GLLAQAEEFILSMPMKPD-ASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLV 732

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY++   WD+   VR  MK  G++KEPG SWIE    ++ F  GD S +Q +++   L
Sbjct: 733 SNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLL 792

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           E L   M KEGYV D    LH+V E++K  +LCGHSE+LAIAFG+LNT PG+ + V KNL
Sbjct: 793 EYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNL 852

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH  TK+I+KI  REI++RD  RFH FK+G CSCGD+W
Sbjct: 853 RVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 315/846 (37%), Positives = 491/846 (58%), Gaps = 37/846 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   + S +R+  + E + ++IEM + +D+ PD+F +P V+KA AG+ D+ +G  +H  V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  +  V V N LV+ YG  G  + D  ++FD + E++ VSWNSMI      G  + 
Sbjct: 214 VKTGL-VEDVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271

Query: 164 ALEAFRMMLYSNVE----PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
           +      M+  N +    P   TLV+V   C+   R   + LG+ VHG ++++      +
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCA---REREIGLGKGVHGWAVKLRLDKELV 328

Query: 220 MN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +N ALM MY+K G + +A+ +FK   ++++VSWNT+V   S           LRQM   G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388

Query: 279 --IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +K D V+I + +P C H   L + KE+H Y+L+ +  + N  V +A V  Y  C  + 
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLS 447

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +RVF  I  K +  WNA+I G+ Q+     +L   ++M+ ++GL P++ T+ S++ AC
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLSAC 506

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            + ++    + +HG  I+  L RD +V  +++ +Y   G +   + +FD ME +  VSWN
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 566

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           T+ITGY   G    AL + R+M                  +   +   I++M V   C  
Sbjct: 567 TVITGYLQNGFPDRALGVFRQM-----------------VLYGIQLCGISMMPVFGACSL 609

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L +L  G+E HAYA++++L  D  +  +L+DMYAK G +  + +VF+ +  ++  +WN +
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           IM YG+HG  +E ++L + M   G       P+++TF+ +  AC+HSG++ EG+    +M
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGH-----NPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           K  +G++P+  HYACV+D+LGRAG+++ A +++     E    G W SLL +CRIHQN+E
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +GE  A  LF LEP+   +YVLLSN+Y+    W+    VR++M EM +RK+ GCSWIE  
Sbjct: 785 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
            ++  F+ G+      E++      L  ++ K GY PDT  V H+++EEEK   L GHSE
Sbjct: 845 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+ +G++ T  GTTIRV KNLR+C DCH A K ISK+  REI++RD +RFHHFKNG C
Sbjct: 905 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 965 SCGDYW 970



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 294/628 (46%), Gaps = 51/628 (8%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +L+A    +D+ +G++IH  V       +   +   ++ MY  CGS   D   VFD
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD-DSRFVFD 144

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            +  K+   WN++I++  R   +D  LE F  M+  +++ P  FT   V  AC+ +S   
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS--- 201

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            + +G  VHG  ++ G   + F+ NAL++ Y   G V DA  LF    +R+LVSWN+++ 
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261

Query: 257 SLSQNDKFLEAVMFLRQMALR----GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
             S N    E+ + L +M          PD  ++ +VLP C+    +  GK +H +A++ 
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK- 320

Query: 313 DILIDNSFV-GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            + +D   V  +AL+DMY  C  +   + +F   ++K +  WN M+ G+   E D     
Sbjct: 321 -LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA-EGDTHGTF 378

Query: 372 LFIKMEEVAG--LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
             ++     G  +  +  T+ + VP C      P  + +H +++K     +  V NA + 
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
            Y++ G +  ++ +F  +  +   SWN +I G+    Q  D  + L     M+       
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH---AQSNDPRLSLDAHLQMK------- 488

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                  +    P+S T+ ++L  C  L +L  GKE+H + IRN L  D+ V  +++ +Y
Sbjct: 489 -------ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
             CG L   + +FD M  +++++WN +I  Y  +G     L + + MV  G     ++  
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-----IQLC 596

Query: 610 EVTFIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
            ++ + +F ACS       G  +    L + ++DD  I  S      ++D+  + G +  
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS------LIDMYAKNGSITQ 650

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIH 692
           + ++ N +  +     +W++++    IH
Sbjct: 651 SSKVFNGLKEK--STASWNAMIMGYGIH 676



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 239/480 (49%), Gaps = 32/480 (6%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPS-SFTLV--SVALACSNLSRRDGLRLGRQVH-- 206
           I+  C  G  D +    +  +  +   S +F LV  ++ L      +R  + +GR++H  
Sbjct: 50  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109

Query: 207 -GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              S R+   +  +   ++ MYA  G  DD++ +F +   ++L  WN ++SS S+N+ + 
Sbjct: 110 VSGSTRLRN-DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168

Query: 266 EAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
           E +  F+  ++   + PD  +   V+ AC+ +  +  G  +H   ++   L+++ FVG+A
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG-LVEDVFVGNA 227

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG--- 381
           LV  Y     V    ++FD + ++ +  WN+MI  +  N + EE+ +L  +M E  G   
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
             P+  T+ +V+P C R       +G+HG A+KL L ++  + NALMDMYS+ G I  ++
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF     ++ VSWNTM+ G++  G       +LR+M    E+                K
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED---------------VK 392

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            + +T++  +P C   S L   KE+H Y+++     + +V +A V  YAKCG L++A+RV
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  +  + V +WN +I  +    + +  L+    M   G     + P+  T  +L +ACS
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG-----LLPDSFTVCSLLSACS 507



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 143/268 (53%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G +++   SW   +   A+SN  R ++ ++++M  S + PD+F   ++L A + ++ L L
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK++H  +++  +    + V  +++++Y  CG ++  V  +FD + +K  VSWN++I   
Sbjct: 515 GKEVHGFIIR-NWLERDLFVYLSVLSLYIHCG-ELCTVQALFDAMEDKSLVSWNTVITGY 572

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
            + G  D AL  FR M+   ++    +++ V  ACS L     LRLGR+ H  +L+ + E
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP---SLRLGREAHAYALKHLLE 629

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + FI  +L+ MYAK G +  +  +F   +++   SWN ++     +    EA+    +M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
              G  PD ++   VL AC+H  ++  G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEG 717


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 331/841 (39%), Positives = 494/841 (58%), Gaps = 35/841 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ +++  F +A+  Y ++  S + PD + FP+V+KA AG+ D  +G  ++  ++
Sbjct: 74  WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+  S + V N LV+MY + G  +    +VFD +  +D VSWNS+I+     G ++ A
Sbjct: 134 EMGFE-SDLYVGNALVDMYSRMGL-LSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-AL 223
           LE +  +  S + P SFT+ SV  A +NL     ++ G+ +HG +L+ G  +  ++N  L
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLV---VKQGQGLHGFTLKSGVNSVSVVNNGL 248

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPD 282
           +AMY K  R  DA+ +F     RD V++NT++    + +   E+V MFL    L   KPD
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLEN--LDQFKPD 306

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +++ SVL AC HL  L   K I+ Y LR   +++++ V + L+D+Y  C ++   R VF
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLEST-VKNILIDVYAKCGDMITARDVF 365

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  K    WN++I+GY Q+    EA+ LF KM  +     +  T   ++    R    
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISLSTRLADL 424

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              +G+H + IK G+  D  V NAL+DMY++ G +  S  IF+ M   DTV+WNT+I+  
Sbjct: 425 KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISA- 483

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
             C + GD    L+    M + K                P+  T +  LP C +L+A   
Sbjct: 484 --CVRFGDFATGLQVTTQMRKNK--------------VVPDMATFLVTLPMCASLAAKRL 527

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKEIH   +R    +++ +G+AL++MY+KCGCL  + RVF+ M  R+V+TW  +I AYGM
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGM 587

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +GEG++ LE   +M   G     + P+ V FIAL  ACSHSG+V +G+  F KMK  Y I
Sbjct: 588 YGEGEKALESFVDMEKSG-----IVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKI 642

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYACVVDLL R+ K+  A + I  MP E D A  W+S+L ACR   ++E  E  +
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPD-ASIWASVLRACRTSGDMETAERVS 701

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + +  L PD   + +L SN Y++ + WDK   +RK +++  ++K PG SWIE G ++H F
Sbjct: 702 RRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVF 761

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIA 821
            +GD S  QSE +H  LE L   M KEGY+PD+  V  N+ EEE K  L+CGHSE+LAIA
Sbjct: 762 CSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIA 821

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+LNT PGT ++V KNLRVC+DCH+ TK ISKI  REI++RD  RFH FK+G CSC D 
Sbjct: 822 FGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDR 881

Query: 882 W 882
           W
Sbjct: 882 W 882



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 177/662 (26%), Positives = 329/662 (49%), Gaps = 42/662 (6%)

Query: 85  KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
           +A++   +L+  ++IHA V+  G   S    +  L++ Y    +    +  VF R++   
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDGSDF-FSGKLIDKYSHFRAPASSL-SVFRRVSPAK 69

Query: 145 QVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
            V  WNS+I    + G +  ALE +  +  S V P  +T  SV  AC+ L   +   +G 
Sbjct: 70  NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE---MGD 126

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
            V+   L +G E + ++ NAL+ MY+++G +  A+ +F     RDLVSWN+++S  S + 
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            + EA+    ++    I PD  +++SVLPA ++L ++  G+ +H + L++ +    S V 
Sbjct: 187 YYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGV-NSVSVVN 245

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           + L+ MY         RRVFD +  +    +N MI GY + E  EE++ +F  +E +   
Sbjct: 246 NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF--LENLDQF 303

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            P+  T++SV+ AC         + I+ + ++ G   +  V+N L+D+Y++ G +  ++ 
Sbjct: 304 KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARD 363

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F+ ME +DTVSWN++I+GY   G   +A+ L + M  MEE+ +                
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH--------------- 408

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
             IT + ++     L+ L  GK +H+  I++ +  D+ V +AL+DMYAKCG +  + ++F
Sbjct: 409 --ITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIF 466

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           + M   + +TWN +I A    G+    L++   M     R  +V P+  TF+     C+ 
Sbjct: 467 NSMGTLDTVTWNTVISACVRFGDFATGLQVTTQM-----RKNKVVPDMATFLVTLPMCAS 521

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
                 G ++   +   +G E        ++++  + G +E ++++   M         W
Sbjct: 522 LAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRR--DVVTW 578

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPD--VASHYVLLSNIY--SSAQLWDKAMDVRKK 738
           + ++ A  ++     GE A ++   +E    V    V ++ IY  S + L +K +   +K
Sbjct: 579 TGMIYAYGMYGE---GEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEK 635

Query: 739 MK 740
           MK
Sbjct: 636 MK 637



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 168/588 (28%), Positives = 285/588 (48%), Gaps = 60/588 (10%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T VS A     LS    L   R++H   + +G + + F    L+  Y+       + ++F
Sbjct: 3   TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62

Query: 241 KSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL--- 296
           +     +++  WN+I+ + S+N  F +A+ F  ++    + PD  +  SV+ AC+ L   
Sbjct: 63  RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122

Query: 297 EMLD-TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           EM D   K+I      +D+     +VG+ALVDMY     +   R+VFD +  + +  WN+
Sbjct: 123 EMGDLVYKQILEMGFESDL-----YVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNS 177

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLW--PNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           +I+GY  + Y EEAL ++    E+   W  P++ T+SSV+PA          +G+HG  +
Sbjct: 178 LISGYSSHGYYEEALEIY---HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTL 234

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           K G+     V N L+ MY +  R   ++ +FD+M VRD+V++NTMI GY         L 
Sbjct: 235 KSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGY---------LK 285

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L      M EE  +  + +LD+     KP+ +T+ +VL  CG L  L+  K I+ Y +R 
Sbjct: 286 L-----EMVEESVKMFLENLDQF----KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRA 336

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
               +  V + L+D+YAKCG +  AR VF+ M  ++ ++WN II  Y   G+  E ++L 
Sbjct: 337 GFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACV 652
           K M+       E + + +T++ L +  +    +  G  L    +K    I+ S  +   +
Sbjct: 397 KMMMIM-----EEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSN--AL 449

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG-EIAAQ-NLFLLEP 710
           +D+  + G+V D+ ++ N M    D    W++++ AC    +   G ++  Q     + P
Sbjct: 450 IDMYAKCGEVGDSLKIFNSMGT-LDTV-TWNTVISACVRFGDFATGLQVTTQMRKNKVVP 507

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           D+A+  V L    S A             K +G  KE  C  + FG E
Sbjct: 508 DMATFLVTLPMCASLAA------------KRLG--KEIHCCLLRFGYE 541



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 259/551 (47%), Gaps = 40/551 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +    + EA+  Y E+  S I PD+F   +VL A A +  +  G+ +H   
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFT 233

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G    SV V N L+ MY K  S   D  +VFD +  +D V++N+MI   C + K ++
Sbjct: 234 LKSGVNSVSV-VNNGLLAMYLKF-SRPTDARRVFDEMVVRDSVTYNTMI---CGYLKLEM 288

Query: 164 ALEAFRMML--YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             E+ +M L      +P   T+ SV  AC +L  RD L L + ++   LR G    + + 
Sbjct: 289 VEESVKMFLENLDQFKPDILTVTSVLCACGHL--RD-LSLAKYIYNYMLRAGFVLESTVK 345

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ +YAK G +  A+ +F S E +D VSWN+I+S   Q+   +EA+   + M +   +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D ++   ++   + L  L  GK +H+  +++ I ID S V +AL+DMY  C EV    +
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLS-VSNALIDMYAKCGEVGDSLK 464

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F+ +       WN +I+   +       L +  +M +   + P+  T    +P C    
Sbjct: 465 IFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRK-NKVVPDMATFLVTLPMCASLA 523

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + IH   ++ G   +  + NAL++MYS+ G +E S  +F+ M  RD V+W  MI 
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIY 583

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y   G +G            E EK   +  D++++ +   P+S+  + ++  C     +
Sbjct: 584 AY---GMYG------------EGEKALESFVDMEKSGI--VPDSVVFIALIYACSHSGLV 626

Query: 521 AKG-----KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
            KG     K    Y I  M+     V    VD+ ++   ++ A      MP+  +   W 
Sbjct: 627 EKGLACFEKMKTHYKIDPMIEHYACV----VDLLSRSQKISKAEEFIQAMPIEPDASIWA 682

Query: 575 VIIMAYGMHGE 585
            ++ A    G+
Sbjct: 683 SVLRACRTSGD 693


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 328/885 (37%), Positives = 499/885 (56%), Gaps = 47/885 (5%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTR--------CKESWIESLRSEARSNQFREA 61
           LL S  L + + H    +  +   LPGS  R        C  SW   + + + +   REA
Sbjct: 30  LLKSGLLHAFRNHL--LSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREA 87

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           + ++  M    ++ + FA P VLK      D  LG Q+HA  V  G     + VAN LV 
Sbjct: 88  LAAFRAMRARGVRCNEFALPIVLKCA---PDAGLGVQVHAVAVSTGLS-GDIFVANALVA 143

Query: 122 MYGKCGSDMWDVYKVFDRIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           MYG  G  + +  +VFD    +++ VSWN M++   +  +   A+E F  M++S V P+ 
Sbjct: 144 MYGGFGF-VDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNE 202

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           F    V  AC+    RD L  GR+VH   +R G + + F  NAL+ MY+KLG +  A  +
Sbjct: 203 FGFSCVVNACTG--SRD-LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F      D+VSWN  +S    +     A+  L QM   G+ P+  +++S+L AC+     
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAG 319

Query: 300 DTG--KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
                ++IH + ++     D+ ++G ALVDMY     ++  R+VF++I  K + LWNA+I
Sbjct: 320 AFALGRQIHGFMIKACADSDD-YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALI 378

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           +G        E+L LF +M +  G   N TT+++V+ +    EA  D   +H  A K+G 
Sbjct: 379 SGCSHGGCHGESLSLFCRMRK-EGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF 437

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D +V N L+D Y +   +  +  +F++    + +++ +MIT  + C    DA+ L  E
Sbjct: 438 LSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFME 497

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M     E                 P+   L ++L  C +LSA  +GK++HA+ I+    T
Sbjct: 498 MLRKGLE-----------------PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT 540

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           DV  G+ALV  YAKCG +  A   F  +P + V++W+ +I     HG G+  L++ + MV
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMV 600

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            E      + PN +T  ++  AC+H+G+V E    F  MK+ +GI+ + +HY+C++DLLG
Sbjct: 601 DE-----RIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLG 655

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAGK++DA +L+N MP E + A  W +LL A R+H++ E+G++AA+ LF+LEP+ +  +V
Sbjct: 656 RAGKLDDAMELVNSMPFEAN-AAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHV 714

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LL+N Y+SA +WD+   VRK MK+  V+KEP  SW+E  D +H F+ GD SH ++  ++ 
Sbjct: 715 LLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYA 774

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            LE L + M K GYVP+    LH+V++ EKE LL  HSE+LA+AF +++TP G  IRV K
Sbjct: 775 KLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKK 834

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLR+C DCH A KFISKI SREII+RD+ RFHHF +G CSCGDYW
Sbjct: 835 NLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 193/675 (28%), Positives = 331/675 (49%), Gaps = 62/675 (9%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC---GSDMWDVYKVFDR 139
           +L   A  Q L LG  IHAH++K G   +     N L++ Y KC   GS      +VFD 
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLLHA---FRNHLLSFYSKCRLPGS----ARRVFDE 62

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
             +   VSW+S++           AL AFR M    V  + F L  + L C+        
Sbjct: 63  TPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFAL-PIVLKCA-----PDA 116

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSS 257
            LG QVH  ++  G   + F+ NAL+AMY   G VD+A+ +F ++  DR+ VSWN ++S+
Sbjct: 117 GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +ND+  +AV    +M   G++P+    + V+ AC+    L+ G+++HA  +R     D
Sbjct: 177 FVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD 236

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             F  +ALVDMY    ++     VF  +    +  WNA I+G   + +D+ AL L ++M+
Sbjct: 237 -VFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMK 295

Query: 378 EVAGLWPNATTMSSVVP--ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
             +GL PN  T+SS++   A   + AF     IHG  IK     D Y+  AL+DMY++ G
Sbjct: 296 S-SGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++ ++ +F+ +  +D + WN +I+G +  G HG++L L   M+    + NR        
Sbjct: 355 LLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRT------- 407

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                     TL  VL    +L A++   ++HA A +    +D  V + L+D Y KC CL
Sbjct: 408 ----------TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCL 457

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
            +A +VF+     N+I +  +I A      G++ ++L   M+ +G     ++P+     +
Sbjct: 458 RYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-----LEPDPFVLSS 512

Query: 616 LFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMM 672
           L  AC+      +G  +  + +K  +      D +A   +V    + G +EDA    + +
Sbjct: 513 LLNACASLSAYEQGKQVHAHLIKRKF----MTDVFAGNALVYTYAKCGSIEDADLAFSGL 568

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSS---AQ 727
           P +     +WS+++G    H + +     A ++F  +++  +A +++ L+++  +   A 
Sbjct: 569 PDK--GVVSWSAMIGGLAQHGHGK----RALDVFRRMVDERIAPNHITLTSVLCACNHAG 622

Query: 728 LWDKAMDVRKKMKEM 742
           L D+A      MKEM
Sbjct: 623 LVDEAKGYFSSMKEM 637



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 59/420 (14%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           SI+ +L   +  + L  G  IHA+ L++ +L  ++F  + L+  Y  CR     RRVFD 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAF-RNHLLSFYSKCRLPGSARRVFDE 62

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
             D     W++++T Y  N    EAL  F  M    G+  N   +  +V  C        
Sbjct: 63  TPDPCHVSWSSLVTAYSNNALPREALAAFRAM-RARGVRCNEFAL-PIVLKCAPDAGLGV 120

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD-MEVRDTVSWNTMITGYT 463
           +  +H  A+  GL  D +V NAL+ MY   G ++ ++ +FD+    R+ VSWN M++ + 
Sbjct: 121 Q--VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              +  DA+ L  EM           V+         +PN      V+  C     L  G
Sbjct: 179 KNDRCSDAVELFGEM-----------VWS------GVRPNEFGFSCVVNACTGSRDLEAG 221

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           +++HA  +R     DV   +ALVDMY+K G ++ A  VF  +P  +V++WN  I    +H
Sbjct: 222 RKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLH 281

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-------------HSGMVSEGM 630
           G  Q  LELL  M + G     + PN  T  ++  AC+             H  M+    
Sbjct: 282 GHDQHALELLLQMKSSG-----LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA 336

Query: 631 DLFYKMKDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
           D      DDY G+         +VD+  + G ++DA ++   +P +      W++L+  C
Sbjct: 337 D-----SDDYIGV--------ALVDMYAKYGLLDDARKVFEWIPRK--DLLLWNALISGC 381



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P SI+   +L    A  +L  G  IHA+ +++ L       + L+  Y+KC     ARRV
Sbjct: 4   PESIS--PLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRV 59

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           FD  P    ++W+ ++ AY  +   +E L   + M A G R  E
Sbjct: 60  FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNE 103


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 317/849 (37%), Positives = 477/849 (56%), Gaps = 38/849 (4%)

Query: 42  KESWIESLRSEARSNQFREAILSYI-------EMTRSDIQPDNFAFPAVLKAVAGIQDLS 94
           +  W  SL+    S +FR      +        +       D+  +  + +    ++D +
Sbjct: 15  RRRWFGSLQLPVPSARFRSTFTRRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAA 74

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           LGKQ+  H+++ G  L+ +   NTL+ +Y  CG ++ +  ++FD +  K  V+WN++IA 
Sbjct: 75  LGKQVRDHIIQGGRQLN-IYELNTLIKLYSICG-NVTEARQIFDSVENKTVVTWNALIAG 132

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
             + G    A   FR M+   +EPS  T +SV  ACS+ +   GL  G++VH   +  G 
Sbjct: 133 YAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPA---GLNWGKEVHAQVVTAGF 189

Query: 215 WNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            + F I  AL++MY K G +DDA+ +F     RD+ ++N +V   +++  + +A     +
Sbjct: 190 VSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYR 249

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G+KP+ +S  S+L  C   E L  GK +HA  + N  L+D+  V ++L+ MY  C 
Sbjct: 250 MQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM-NAGLVDDIRVATSLIRMYTTCG 308

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E  RRVFD +  + +  W  MI GY +N   E+A  LF  M+E  G+ P+  T   ++
Sbjct: 309 SIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE-EGIQPDRITYMHIM 367

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC  S        IH      G G D  V  AL+ MY++ G I+ ++ +FD M  RD V
Sbjct: 368 NACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVV 427

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SW+ MI  Y   G   +A      M+       R+N+          +P+ +T + +L  
Sbjct: 428 SWSAMIGAYVENGYGTEAFETFHLMK-------RSNI----------EPDGVTYINLLNA 470

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           CG L AL  G EI+  AI+  L + V +G+AL+ M AK G +  AR +FD M  R+VITW
Sbjct: 471 CGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITW 530

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  Y +HG  +E L L   M+ E       +PN VTF+ + +ACS +G V EG   F
Sbjct: 531 NAMIGGYSLHGNAREALYLFDRMLKE-----RFRPNSVTFVGVLSACSRAGFVDEGRRFF 585

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             + +  GI P+   Y C+VDLLGRAG++++A  LI  MP +   +  WSSLL ACRIH 
Sbjct: 586 TYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVK-PTSSIWSSLLVACRIHG 644

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N+++ E AA+   +++P   + YV LS++Y++A +W+    VRK M+  G+RKE GC+WI
Sbjct: 645 NLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWI 704

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E   ++H F+  D SH    +++  L  L   +++EGY+P T  VLH+V E++KE  +  
Sbjct: 705 EVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISY 764

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAIA+G+L+ P GT IR+ KNLRVC+DCH A+KFISK+  REII RD  RFHHFK+
Sbjct: 765 HSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKD 824

Query: 874 GTCSCGDYW 882
           G CSCGDYW
Sbjct: 825 GVCSCGDYW 833


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 313/840 (37%), Positives = 479/840 (57%), Gaps = 30/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+    ++A   + EM  +   P+   + ++L A     +L  GK+IH+ +
Sbjct: 95  SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GY      V N+L++MYGKCG D+    +VF  I+ +D VS+N+M+    +      
Sbjct: 155 IKAGYQRDP-RVQNSLLSMYGKCG-DLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L  F  M    + P   T +++  A +  S  D    G+++H  ++  G   +  +  A
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE---GKRIHKLTVEEGLNSDIRVGTA 269

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ M  + G VD AK  FK   DRD+V +N ++++L+Q+   +EA     +M   G+  +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  S+L ACS  + L+ GK IH++ +  D    +  +G+AL+ MY  C ++   R +F
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSH-ISEDGHSSDVQIGNALISMYARCGDLPKARELF 388

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  WNA+I GY + E   EA+ L+ +M+   G+ P   T   ++ AC  S A+
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS-EGVKPGRVTFLHLLSACANSSAY 447

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            D + IH   ++ G+  + ++ NALM+MY R G +  ++ +F+  + RD +SWN+MI G+
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G +  A  L +EMQN E E                 P++IT  +VL GC    AL  
Sbjct: 508 AQHGSYETAYKLFQEMQNEELE-----------------PDNITFASVLSGCKNPEALEL 550

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IH     + L  DV +G+AL++MY +CG L  AR VF  +  R+V++W  +I     
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            GE  + +EL   M  EG R     P+  TF ++ +AC+H+G+V EG  +F  M+ +YG+
Sbjct: 611 QGEDMKAIELFWQMQNEGFR----PPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGV 666

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P+ +HY C+V LLGRA + ++A  LIN MP   D A  W +LLGACRIH N+ + E AA
Sbjct: 667 LPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPD-AAVWETLLGACRIHGNIALAEHAA 725

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            N   L     + Y+LLSN+Y++A  WD    +R+ M+  G+RKEPG SWIE  + IH+F
Sbjct: 726 NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 785

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           +A D SH ++ +++  L+ LS  M + GY PDT  VLH++ +  +ET LC HSE+LAIA+
Sbjct: 786 IAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAY 845

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G++ TPPGT IR+ KNLR+C DCH A+KFISK+  REII RD  RFH FKNG CSC DYW
Sbjct: 846 GLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 178/617 (28%), Positives = 322/617 (52%), Gaps = 33/617 (5%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           + D   + A+L+     + L   K+IHA +V+ G G   + ++N L+NMY KC S + D 
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVG-PDIFLSNLLINMYVKCRS-VLDA 81

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           ++VF  +  +D +SWNS+I+   + G    A + F  M  +   P+  T +S+  AC + 
Sbjct: 82  HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +    L  G+++H   ++ G + +  + N+L++MY K G +  A+ +F     RD+VS+N
Sbjct: 142 AE---LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +Q     E +    QM+  GI PD V+  ++L A +   MLD GK IH   +  
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            +  D   VG+ALV M   C +V+  ++ F  I+D+ + ++NA+I    Q+ ++ EA   
Sbjct: 259 GLNSDIR-VGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           + +M    G+  N TT  S++ AC  S+A    + IH H  + G   D  + NAL+ MY+
Sbjct: 318 YYRMRS-DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R G +  ++ +F  M  RD +SWN +I GY      G+A+ L ++MQ+            
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS------------ 424

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
             E V   KP  +T + +L  C   SA A GK IH   +R+ + ++  + +AL++MY +C
Sbjct: 425 --EGV---KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G L  A+ VF+    R+VI+WN +I  +  HG  +   +L + M  E     E++P+ +T
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE-----ELEPDNIT 534

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F ++ + C +   +  G  +  ++ +  G++   +    ++++  R G ++DA  + + +
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593

Query: 673 PPEFDKAGAWSSLLGAC 689
             +     +W++++G C
Sbjct: 594 --QHRDVMSWTAMIGGC 608



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 255/536 (47%), Gaps = 38/536 (7%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           N +R+  L   +++H   +  G   + F+ N L+ MY K   V DA  +FK    RD++S
Sbjct: 36  NCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVIS 95

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+++S  +Q     +A     +M   G  P+ ++  S+L AC     L+ GK+IH+  +
Sbjct: 96  WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +     D   V ++L+ MY  C ++   R+VF  IS + +  +N M+  Y Q  Y +E L
Sbjct: 156 KAGYQRDPR-VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECL 214

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF +M    G+ P+  T  +++ A        + + IH   ++ GL  D  V  AL+ M
Sbjct: 215 GLFGQMSS-EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
             R G ++ +K  F  +  RD V +N +I       QHG  +    +   M         
Sbjct: 274 CVRCGDVDSAKQAFKGIADRDVVVYNALIAAL---AQHGHNVEAFEQYYRMRS------- 323

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
              D   L    N  T +++L  C    AL  GK IH++   +  ++DV +G+AL+ MYA
Sbjct: 324 ---DGVAL----NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           +CG L  AR +F  MP R++I+WN II  Y    +  E + L K M +EG     VKP  
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG-----VKPGR 431

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTF+ L +AC++S   ++G  + ++     GI+ +      ++++  R G + +A  +  
Sbjct: 432 VTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE 490

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLLS 720
               +     +W+S++     H + E     A  LF       LEPD  +   +LS
Sbjct: 491 --GTQARDVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEPDNITFASVLS 540



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G+Q R   SW   +   A+   +  A   + EM   +++PDN  F +VL      + L L
Sbjct: 491 GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GKQIH  + + G  L  V + N L+NMY +CGS + D   VF  +  +D +SW +MI   
Sbjct: 551 GKQIHGRITESGLQL-DVNLGNALINMYIRCGS-LQDARNVFHSLQHRDVMSWTAMIGGC 608

Query: 156 CRFGKWDLALEAFRMMLYSNVE-PSSFTLVSVALACSN 192
              G+   A+E F  M       P   T  S+  AC++
Sbjct: 609 ADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNH 646


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/842 (37%), Positives = 487/842 (57%), Gaps = 46/842 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   + S +R+  + E +  +I+M +++ + PDNF FP V+KA AGI D+ +G  +H  V
Sbjct: 154 WNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLV 213

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  +  + V N LV+ YG  G  + D  K+FD + E++ VSWNSMI      G  D 
Sbjct: 214 VKTGL-VEDLFVGNALVSFYGTHGF-VSDALKLFDIMPERNLVSWNSMIRVFSDNGD-DG 270

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A             P   T+V+V   C+   R   + +G+ VHG ++++  +    + NA
Sbjct: 271 AFM-----------PDVATVVTVLPVCA---REREIGVGKGVHGWAVKLSLDKELVVNNA 316

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIK 280
           LM MY+K G + D++ +FK   ++++VSWNT+V   S           LRQM      +K
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D V+I + +P C    +L + KE+H Y+L+ + + D   + +A V  Y  C  +   +R
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYD-ELLANAFVASYAKCGSLSYAQR 435

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF  I  K +  WNA+I GY Q+     +L   ++M+  +GL P+  T+ S++ AC + +
Sbjct: 436 VFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN-SGLLPDNFTVCSLLSACSKLK 494

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +    + +HG  I+  L RD +V  +++ +Y   G +   + +FD ME    VSWNT+IT
Sbjct: 495 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G+   G    AL L R+M                  +   +P  I++MTV   C  L +L
Sbjct: 555 GHLQNGFPERALGLFRQM-----------------VLYGIQPCGISMMTVFGACSLLPSL 597

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+E HAYA++++L  +  +  +++DMYAK G +  + +VF+ +  ++  +WN +IM Y
Sbjct: 598 RLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGY 657

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
           GMHG  +E ++L + M   G       P+++TF+ +  AC+HSG++ EG+    +MK  +
Sbjct: 658 GMHGRAKEAIKLFEEMQRTGR-----NPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSF 712

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G++P+  HYACV+D+LGRAG++++A ++   M  E D  G W+SLL  CRIHQN+E+GE 
Sbjct: 713 GLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPD-VGIWNSLLSWCRIHQNLEMGEK 771

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            A  LF+LEP+   +YVLLSN+Y+    WD    VR++MKEM +RK+ GCSWIE   ++ 
Sbjct: 772 VAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVF 831

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F+ G+      E++      L  ++ K GY PDTS V H+++EEEK   L GHSEKLAI
Sbjct: 832 SFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAI 891

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            +G++ T  GTT+RV KNLR+C DCH A K ISK+  REI++RD +RFHHF  G CSCGD
Sbjct: 892 TYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGD 951

Query: 881 YW 882
           YW
Sbjct: 952 YW 953



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/626 (25%), Positives = 298/626 (47%), Gaps = 63/626 (10%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVF 137
           A   +L+A    +D+ +G++IH H+V     L S  V  T ++ MY  CGS   D    F
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPD-DSRSAF 143

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRR 196
           D +  K+   WN++I++  R   +   LE F +M+  +++ P +FT   V  AC+ +S  
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGIS-- 201

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             + +G  VHG  ++ G   + F+ NAL++ Y   G V DA  LF    +R+LVSWN+++
Sbjct: 202 -DVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI 260

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
              S N    +   F+         PD  ++ +VLP C+    +  GK +H +A++  + 
Sbjct: 261 RVFSDNG---DDGAFM---------PDVATVVTVLPVCAREREIGVGKGVHGWAVK--LS 306

Query: 316 IDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           +D    V +AL+DMY     +   + +F   ++K +  WN M+ G+           L  
Sbjct: 307 LDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLR 366

Query: 375 KMEEVAG---LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +M  +AG   +  +  T+ + VP C      P  + +H +++K     D  + NA +  Y
Sbjct: 367 QM--LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASY 424

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G +  ++ +F  +  +   SWN +I GY    Q  D  + L     M   KN   + 
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGY---AQSSDPRLSLDAHLQM---KNSGLL- 477

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                     P++ T+ ++L  C  L +L  GKE+H + IRN L  D+ V  +++ +Y  
Sbjct: 478 ----------PDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 527

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L   + +FD M   ++++WN +I  +  +G  +  L L + MV  G     ++P  +
Sbjct: 528 CGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG-----IQPCGI 582

Query: 612 TFIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           + + +F ACS       G  +    L + ++D+  I  S      ++D+  + G +  + 
Sbjct: 583 SMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACS------IIDMYAKNGAITQSS 636

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIH 692
           ++ N +  +   A +W++++    +H
Sbjct: 637 KVFNGLKEK--SAASWNAMIMGYGMH 660



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 239/480 (49%), Gaps = 48/480 (10%)

Query: 152 IATLCRFGKWDLALEAFRMM--LYSNVEPSS--FTLV--SVALACSNLSRRDGLRLGRQV 205
           I+  C  G  D   ++FR++     + E SS  F LV  ++ L      +R  + +GR++
Sbjct: 50  ISNFCETGDLD---KSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKI 106

Query: 206 H---GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           H     S R+   +  +   ++ MYA  G  DD+++ F +   ++L  WN ++SS S+N+
Sbjct: 107 HHLVSGSTRLRS-DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNE 165

Query: 263 KFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            + E + MF++ ++   + PD  +   V+ AC+ +  +  G  +H   ++   L+++ FV
Sbjct: 166 LYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTG-LVEDLFV 224

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
           G+ALV  Y     V    ++FD + ++ +  WN+MI  +  N  D+ A M          
Sbjct: 225 GNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG-DDGAFM---------- 273

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
             P+  T+ +V+P C R       +G+HG A+KL L ++  V NALMDMYS+ G I  S+
Sbjct: 274 --PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQ 331

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF     ++ VSWNTM+ G++  G       LLR+M    E+                K
Sbjct: 332 MIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSED---------------VK 376

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            + +T++  +P C   S L   KE+H Y+++     D ++ +A V  YAKCG L++A+RV
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  +  + + +WN +I  Y    + +  L+    M   G     + P+  T  +L +ACS
Sbjct: 437 FHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSG-----LLPDNFTVCSLLSACS 491



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 170/325 (52%), Gaps = 7/325 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G +++   SW   +   A+S+  R ++ ++++M  S + PDNF   ++L A + ++ L L
Sbjct: 439 GIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRL 498

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK++H  +++  +    + V  +++++Y  CG ++  V  +FD + +   VSWN++I   
Sbjct: 499 GKEVHGFIIR-NWLERDLFVYLSVLSLYIHCG-ELCTVQVLFDAMEDNSLVSWNTVITGH 556

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
            + G  + AL  FR M+   ++P   ++++V  ACS L     LRLGR+ H  +L+ + E
Sbjct: 557 LQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLP---SLRLGREAHAYALKHLLE 613

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N FI  +++ MYAK G +  +  +F   +++   SWN ++     + +  EA+    +M
Sbjct: 614 DNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEM 673

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G  PD ++   VL AC+H  +L  G         +  L  N    + ++DM     +
Sbjct: 674 QRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 733

Query: 335 VECGRRVFDFISDK-KIALWNAMIT 358
           ++   RV   +S++  + +WN++++
Sbjct: 734 LDNALRVAAEMSEEPDVGIWNSLLS 758


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 310/848 (36%), Positives = 507/848 (59%), Gaps = 44/848 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +    R+  + EAI +++E+ + ++ QPDNF FP ++KA  G  D+ LGK +H   
Sbjct: 177 WNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMA 236

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  +  + V N ++ +YGKCG  + +  ++FD++ E++ +SWNS+I      G W  
Sbjct: 237 VKMGL-IMDLFVGNAMIALYGKCGF-LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 164 ALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
           A  AFR +L S   + P   T+V++   CS     D   +G  +HG ++++G  +  ++ 
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD---VGMVIHGMAVKLGLVHELMVC 351

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           NAL+ MY+K G + +A  LF+  E++ +VSWN+++ + S+     E    LR+M +    
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI----LIDNSFVGSALVDMYCNCRE 334
           ++ + V+I ++LPAC     L + + +H Y+LR+      LI+N+F+ +     Y  C  
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAA-----YAKCGS 466

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     VF  ++ K ++ WNA+I G+ QN    +AL  + +M  + G+ P+  ++ S++ 
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLL 525

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC R       + IHG  ++ GL  + +V  +L+ +Y    +    +T F+ M  +++V 
Sbjct: 526 ACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVC 585

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN M++GY+      +AL L R+M              L + +   +P+ I + ++L  C
Sbjct: 586 WNAMLSGYSQNELPNEALSLFRQM--------------LSDGL---EPDEIAIASILGAC 628

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             LSAL  GKE+H +A++N L  D  V  +L+DMYAK G L  ++R+F+ +  + V +WN
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
           V+I  +G+HG+G + +EL ++M     +  + +P+  TF+ +  AC H+G+VSEG++   
Sbjct: 689 VMITGFGVHGQGNKAVELFEDM-----KRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
           +M+  Y +EP  +HYACV+D+LGRAG++ +A   IN MP E D A  WSSLL +   + +
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPD-AKIWSSLLSSSITYVD 802

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E+GE  A+ L  LE + A  Y+LLSN+Y++A  WD    VR+KMK++ ++K+ GCSWIE
Sbjct: 803 LEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIE 862

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
              +++ F+AG+ S+  S+++      L +++ + GY PD SCVLH + E EK  +L GH
Sbjct: 863 LRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGH 922

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEK+AI FG LNT  GTT+R++KNLR+C DCH A K+ISK   REI++RD +RFHHFK G
Sbjct: 923 SEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKG 982

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 983 ICSCGDYW 990



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 307/630 (48%), Gaps = 43/630 (6%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D+     A   +L+     +++ +G+++   +           +   L+ MY  CG  + 
Sbjct: 102 DLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPL- 160

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALAC 190
           +   VFDR+  K+   WN++++   R   +D A+  F  ++  +  +P +FT   +  AC
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC 220

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           +    +  + LG+ VHG ++++G   + F+ NA++A+Y K G +D+A  LF    +++L+
Sbjct: 221 TG---KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLI 277

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           SWN+++   S+N  +LEA    R +  +  G+ PD  ++ ++LP CS    +D G  IH 
Sbjct: 278 SWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
            A++   L+    V +AL+DMY  C  +     +F  I +K +  WN+MI  Y +  +  
Sbjct: 338 MAVKLG-LVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVF 396

Query: 368 EALMLFIKM---EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           E   L  KM   EE+  +  N  T+ +++PAC+          +HG++++        + 
Sbjct: 397 ETFDLLRKMWMEEELMEV--NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NA +  Y++ G +  ++ +F  M  +   SWN +I G+    Q+GD +  L         
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA---QNGDPIKALD-------- 503

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                 +  + T L   P+  +++++L  CG L  L  GKEIH + +RN L  +  V  +
Sbjct: 504 ------FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 557

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ +Y  C    + R  F+ M  +N + WN ++  Y  +    E L L + M+++G    
Sbjct: 558 LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG---- 613

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC-VVDLLGRAGKV 662
            ++P+E+   ++  ACS    +  G ++  + +K+        +  AC ++D+  ++G +
Sbjct: 614 -LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL---MEDNFVACSLMDMYAKSGFL 669

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             + ++ N +  +  +  +W+ ++    +H
Sbjct: 670 GHSQRIFNRLNGK--EVASWNVMITGFGVH 697



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G  T+   SW   +   A++    +A+  Y EMTR  I PD+F+  ++L A   +  L  
Sbjct: 476 GMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQY 535

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK+IH  V++ G  ++S  VA +L+++Y  C    +     F+ + +K+ V WN+M++  
Sbjct: 536 GKEIHGFVLRNGLEMNSF-VAVSLLSLYFHCSKPFYG-RTYFETMGDKNSVCWNAMLSGY 593

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            +    + AL  FR ML   +EP    + S+  ACS LS    L LG++VH  +L+    
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS---ALGLGKEVHCFALKNSLM 650

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+  +LM MYAK G +  ++ +F     +++ SWN +++    + +  +AV     M
Sbjct: 651 EDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDM 710

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
                +PD  +   VL AC H  ++  G
Sbjct: 711 KRSDKQPDRFTFLGVLQACCHAGLVSEG 738


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 310/848 (36%), Positives = 507/848 (59%), Gaps = 44/848 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +    R+  + EAI +++E+ + ++ QPDNF FP ++KA  G  D+ LGK +H   
Sbjct: 177 WNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMA 236

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  +  + V N ++ +YGKCG  + +  ++FD++ E++ +SWNS+I      G W  
Sbjct: 237 VKMGL-IMDLFVGNAMIALYGKCGF-LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294

Query: 164 ALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
           A  AFR +L S   + P   T+V++   CS     D   +G  +HG ++++G  +  ++ 
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD---VGMVIHGMAVKLGLVHELMVC 351

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           NAL+ MY+K G + +A  LF+  E++ +VSWN+++ + S+     E    LR+M +    
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI----LIDNSFVGSALVDMYCNCRE 334
           ++ + V+I ++LPAC     L + + +H Y+LR+      LI+N+F+ +     Y  C  
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAA-----YAKCGS 466

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     VF  ++ K ++ WNA+I G+ QN    +AL  + +M  + G+ P+  ++ S++ 
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLL 525

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC R       + IHG  ++ GL  + +V  +L+ +Y    +    +T F+ M  +++V 
Sbjct: 526 ACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVC 585

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN M++GY+      +AL L R+M              L + +   +P+ I + ++L  C
Sbjct: 586 WNAMLSGYSQNELPNEALSLFRQM--------------LSDGL---EPDEIAIASILGAC 628

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             LSAL  GKE+H +A++N L  D  V  +L+DMYAK G L  ++R+F+ +  + V +WN
Sbjct: 629 SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
           V+I  +G+HG+G + +EL ++M     +  + +P+  TF+ +  AC H+G+VSEG++   
Sbjct: 689 VMITGFGVHGQGNKAVELFEDM-----KRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
           +M+  Y +EP  +HYACV+D+LGRAG++ +A   IN MP E D A  WSSLL +   + +
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPD-AKIWSSLLSSSITYVD 802

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E+GE  A+ L  LE + A  Y+LLSN+Y++A  WD    VR+KMK++ ++K+ GCSWIE
Sbjct: 803 LEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIE 862

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
              +++ F+AG+ S+  S+++      L +++ + GY PD SCVLH + E EK  +L GH
Sbjct: 863 LRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGH 922

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEK+AI FG LNT  GTT+R++KNLR+C DCH A K+ISK   REI++RD +RFHHFK G
Sbjct: 923 SEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKG 982

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 983 ICSCGDYW 990



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 307/630 (48%), Gaps = 43/630 (6%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D+     A   +L+     +++ +G+++   +           +   L+ MY  CG  + 
Sbjct: 102 DLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPL- 160

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALAC 190
           +   VFDR+  K+   WN++++   R   +D A+  F  ++  +  +P +FT   +  AC
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC 220

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           +    +  + LG+ VHG ++++G   + F+ NA++A+Y K G +D+A  LF    +++L+
Sbjct: 221 TG---KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLI 277

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           SWN+++   S+N  +LEA    R +  +  G+ PD  ++ ++LP CS    +D G  IH 
Sbjct: 278 SWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
            A++   L+    V +AL+DMY  C  +     +F  I +K +  WN+MI  Y +  +  
Sbjct: 338 MAVKLG-LVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVF 396

Query: 368 EALMLFIKM---EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           E   L  KM   EE+  +  N  T+ +++PAC+          +HG++++        + 
Sbjct: 397 ETFDLLRKMWMEEELMEV--NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NA +  Y++ G +  ++ +F  M  +   SWN +I G+    Q+GD +  L         
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA---QNGDPIKALD-------- 503

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                 +  + T L   P+  +++++L  CG L  L  GKEIH + +RN L  +  V  +
Sbjct: 504 ------FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 557

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ +Y  C    + R  F+ M  +N + WN ++  Y  +    E L L + M+++G    
Sbjct: 558 LLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG---- 613

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYAC-VVDLLGRAGKV 662
            ++P+E+   ++  ACS    +  G ++  + +K+        +  AC ++D+  ++G +
Sbjct: 614 -LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL---MEDNFVACSLMDMYAKSGFL 669

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             + ++ N +  +  +  +W+ ++    +H
Sbjct: 670 GHSQRIFNRLNGK--EVASWNVMITGFGVH 697



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G  T+   SW   +   A++    +A+  Y EMTR  I PD+F+  ++L A   +  L  
Sbjct: 476 GMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQY 535

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK+IH  V++ G  ++S  VA +L+++Y  C    +     F+R+ +K+ V WN+M++  
Sbjct: 536 GKEIHGFVLRNGLEMNSF-VAVSLLSLYFHCSKPFYG-RTYFERMGDKNSVCWNAMLSGY 593

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            +    + AL  FR ML   +EP    + S+  ACS LS    L LG++VH  +L+    
Sbjct: 594 SQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS---ALGLGKEVHCFALKNSLM 650

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+  +LM MYAK G +  ++ +F     +++ SWN +++    + +  +AV     M
Sbjct: 651 EDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDM 710

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
                +PD  +   VL AC H  ++  G
Sbjct: 711 KRSDKQPDRFTFLGVLQACCHAGLVSEG 738


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 309/836 (36%), Positives = 484/836 (57%), Gaps = 34/836 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR    S   + A+       + DI P      +VL+  A  + L  GK++   +   G+
Sbjct: 68  LRRFCESGNLKNAVKLLHVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGF 125

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L S  + + L  MY  CG D+ +  +VFD++  +  + WN ++  L + G +  ++  F
Sbjct: 126 VLDS-NLGSKLALMYTNCG-DLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNALMAM 226
           + M+ S VE  S+T   V+ + S+L   +G   G Q+HG  L+   GE N+ + N+L+A 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVNG---GEQLHGYILKSGFGERNS-VGNSLVAF 239

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K  RVD A+ +F    +RD++SWN+I++    N    + +    QM   GI+ D  +I
Sbjct: 240 YLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATI 299

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            SV   C+   ++  G+ +H + ++     ++ F  + L+DMY  C +++  + VF  +S
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT-LLDMYSKCGDLDSAKVVFREMS 358

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + +  + +MI GY +     EA+ LF +MEE  G+ P+  T+++V+  C R+    + +
Sbjct: 359 GRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARNRLLDEGK 417

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H    +  +G D +V NALMDMY++ G +  ++ +F +M V+D +SWNT+I GY+   
Sbjct: 418 RVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +AL L                ++L     R  P+  T+  VLP C +LSA  KG+EI
Sbjct: 478 YANEALSL----------------FNLLLVEKRFSPDERTVACVLPACASLSAFDKGREI 521

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H Y +RN   +D  V ++LVDMYAKCG L  AR +FD +  +++++W V+I  YGMHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFG 581

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +E + L   M   G     ++P+E++F++L  ACSHSG+V EG   F  M+ +  IEP+ 
Sbjct: 582 KEAIALFNQMRQAG-----IEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HYAC+VD+L R G +  AY+ I  MP   D A  W +LL  CRIH +V++ E  A+ +F
Sbjct: 637 EHYACIVDMLARTGNLSKAYRFIENMPIPPD-ATIWGALLCGCRIHHDVKLAERVAEKVF 695

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEP+   +YVL++NIY+ A+ W++   +RK++ + G+RK PGCSWIE    ++ F+AGD
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            S+ ++E++  FL  +  RM +EGY P T   L +  E EKE  LCGHSEKLA+A GI++
Sbjct: 756 SSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIIS 815

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  G  IRV KNLRVC DCH+  KF+SK+  REI+LRD  RFH FK+G CSC  +W
Sbjct: 816 SGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 159/323 (49%), Gaps = 16/323 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S+   +   AR     EA+  + EM    I PD +   AVL   A  + L  GK++H  +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +   G   + V+N L++MY KCGS M +   VF  +  KD +SWN++I    +    + 
Sbjct: 424 KENDMGF-DIFVSNALMDMYAKCGS-MREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481

Query: 164 ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
           AL  F ++L      P   T+  V  AC++LS  D    GR++HG  +R G + +  + N
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDK---GREIHGYIMRNGYFSDRHVAN 538

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK G +  A+ LF     +DLVSW  +++    +    EA+    QM   GI+P
Sbjct: 539 SLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEP 598

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRR 340
           D +S  S+L ACSH  ++D G       +R++  I+ +    A +VDM      +    +
Sbjct: 599 DEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGNLS---K 654

Query: 341 VFDFISDKKI----ALWNAMITG 359
            + FI +  I     +W A++ G
Sbjct: 655 AYRFIENMPIPPDATIWGALLCG 677


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 313/791 (39%), Positives = 470/791 (59%), Gaps = 36/791 (4%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           L K++HA +V  G  + S  ++  LVN+Y   G D+      FD+I  KD  +WNSMI+ 
Sbjct: 91  LAKRLHALLVVSG-KIQSNFISIRLVNLYASLG-DVSLSRGTFDQIQRKDVYTWNSMISA 148

Query: 155 LCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
             R G +  A++ F +++L +  +   +T   V  AC  L        GR++H    ++G
Sbjct: 149 YVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD------GRKIHCWVFKLG 202

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            +W+ F+  +L+ MY++ G V  A++LF     RD+ SWN ++S L QN    +A+  L 
Sbjct: 203 FQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 262

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L GI  D V++AS+LP C+ L  + T   IH Y +++ +  +  FV +AL++MY   
Sbjct: 263 EMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE-LFVSNALINMYAKF 321

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +   ++VF  +  + +  WN++I  Y QN+    A   F KM+ + GL P+  T+ S+
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ-LNGLEPDLLTLVSL 380

Query: 393 VPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
                +S  + +   +HG  ++ G L     + NA+MDMY+++G I+ +  +F+ + V+D
Sbjct: 381 ASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKD 440

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSWNT+I+GYT  G   +A+ + R M+   E                 K N  T +++L
Sbjct: 441 VVSWNTLISGYTQNGLASEAIEVYRMMEECRE----------------IKLNQGTWVSIL 484

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
                + AL +G  IH + I+  L  DV VG+ L+D+Y KCG L  A  +F  +P  + +
Sbjct: 485 AAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSV 544

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            WN II  +G+HG G++ L+L + M  EG     VKP+ VTFI+L +ACSHSG+V EG  
Sbjct: 545 PWNAIISCHGIHGHGEKALKLFREMQDEG-----VKPDHVTFISLLSACSHSGLVDEGKW 599

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F+ M++ YGI+PS  HY C+VDLLGRAG +E AY  I  MP   D A  W +LLGACRI
Sbjct: 600 FFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD-ASIWGALLGACRI 657

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H N+E+G+ A+  LF ++ +   +YVLLSNIY++   W+    VR   +E G++K PG S
Sbjct: 658 HGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 717

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            IE    +  F  G+ SH + ++++  L  L+ +M+  GY+PD S VL +V E+EKE +L
Sbjct: 718 SIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 777

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LAIAFGI++TPP + IR+ KNLRVC DCH ATKFIS+I  REI++RD +RFHHF
Sbjct: 778 TSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHF 837

Query: 872 KNGTCSCGDYW 882
           KNG CSCGDYW
Sbjct: 838 KNGICSCGDYW 848



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 171/606 (28%), Positives = 287/606 (47%), Gaps = 35/606 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   + +  R+  FREAI  + ++   +  Q D + FP VLKA   + D   G++IH  
Sbjct: 141 TWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCW 197

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V K G+    V VA +L++MY + G  +     +FD +  +D  SWN+MI+ L + G   
Sbjct: 198 VFKLGFQW-DVFVAASLIHMYSRFGF-VGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 255

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+    M    +   S T+ S+   C+ L     +     +H   ++ G E+  F+ N
Sbjct: 256 QALDVLDEMRLEGINMDSVTVASILPVCAQLG---DISTATLIHLYVIKHGLEFELFVSN 312

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK G + DA+ +F+    RD+VSWN+I+++  QND  + A  F  +M L G++P
Sbjct: 313 ALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++ S+    +        + +H + +R   L++   +G+A++DMY     ++   +V
Sbjct: 373 DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKV 432

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ I  K +  WN +I+GY QN    EA+ ++  MEE   +  N  T  S++ A     A
Sbjct: 433 FNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGA 492

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IHGH IK  L  D +V   L+D+Y + GR+  +  +F  +    +V WN +I+ 
Sbjct: 493 LQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISC 552

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           + I G    AL L REMQ              DE V   KP+ +T +++L  C     + 
Sbjct: 553 HGIHGHGEKALKLFREMQ--------------DEGV---KPDHVTFISLLSACSHSGLVD 595

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           +GK          +   +     +VD+  + G L  A      MP+  +   W  ++ A 
Sbjct: 596 EGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGAC 655

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            +HG     +EL K       R  EV    V +  L +    +    EG+D    +  + 
Sbjct: 656 RIHGN----IELGK---FASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARER 708

Query: 641 GIEPSP 646
           G++ +P
Sbjct: 709 GLKKTP 714


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/847 (36%), Positives = 507/847 (59%), Gaps = 37/847 (4%)

Query: 58   FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
            + EA   +  M +  + PDNF F + L+    ++    GKQ+H+ ++  G+      V N
Sbjct: 257  WEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK-GDTFVGN 315

Query: 118  TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
             L++MY KC  D     KVFD + E++QV+WNS+I+   +FG ++ AL  F  M  S  +
Sbjct: 316  ALIDMYAKC-DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK 374

Query: 178  PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDA 236
             + F L S+ +A + L+    +  GR++HG+ +R +   +  + +AL+ MY+K G V++A
Sbjct: 375  SNRFNLGSILMASAGLA---DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEA 431

Query: 237  KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSH 295
              +F+S  +R+ VS+N +++   Q  K  EA+     M    GI+PD  +  ++L  C++
Sbjct: 432  HQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN 491

Query: 296  LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
                + G++IHA+ +R +I   N  V + LV MY  C  +   + +F+ ++++    WN+
Sbjct: 492  QRNDNQGRQIHAHLIRANI-TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNS 550

Query: 356  MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
            MI GY QN   +EAL LF +M+ + G+ P+  ++SS++ +CV          +H   ++ 
Sbjct: 551  MIEGYQQNGETQEALRLFKQMQ-LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609

Query: 416  GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
             +  +  +Q  L+DMY++ G ++ +  ++D    +D +  N M++ +   G+  DA  L 
Sbjct: 610  TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669

Query: 476  REMQNME----------------EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
             +M+                   ++++ N+  ++ E+ +  + + +T++T++  C +L A
Sbjct: 670  DQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDI--EYDVLTMVTIVNLCSSLPA 727

Query: 520  LAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            L  G ++H+  I+   +   VV+ +ALVDMY+KCG +  AR VFD M  +N+++WN +I 
Sbjct: 728  LEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMIS 787

Query: 579  AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
             Y  HG  +E L L + M  +G     + PNEVTF+A+ +ACSH+G+V EG+ +F  M++
Sbjct: 788  GYSKHGCSKEALILYEEMPKKG-----MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842

Query: 639  DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            DY IE   +HY C+VDLLGRAG++EDA + +  MP E  +   W +LLGACR+H+++++G
Sbjct: 843  DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE-PEVSTWGALLGACRVHKDMDMG 901

Query: 699  EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             +AAQ LF L+P     YV++SNIY++A  W +  D+R+ MK  GV+K+PG SWIE   E
Sbjct: 902  RLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSE 961

Query: 759  IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE---EEKETLLCGHS 815
            I  F AG  +H ++E+++  L +L+ + +  GY+PDTS +L NV +   EE+E  L  HS
Sbjct: 962  IQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHS 1021

Query: 816  EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
            E+LA++ G+++ P  +TIRV KNLR+C DCH ATKFISKI  R II RD  RFHHF+NG 
Sbjct: 1022 ERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGK 1081

Query: 876  CSCGDYW 882
            CSCGDYW
Sbjct: 1082 CSCGDYW 1088



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 307/597 (51%), Gaps = 39/597 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + AR + + E +  Y  M  S    D F FP+V+KA   ++D+   +Q+ + V
Sbjct: 142 AWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSV 201

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G    ++ V   LV+ Y + G  M D     D I     V+WN++IA   +   W+ 
Sbjct: 202 VKAGLN-CNLFVGGALVDGYARFGW-MDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEE 259

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A   F  ML   V P +FT  S    C  L  RDG   G+QVH   +  G + +TF+ NA
Sbjct: 260 AWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG---GKQVHSKLIACGFKGDTFVGNA 316

Query: 223 LMAMYAKLGRVDDAKTLFKSFE---DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           L+ MYAK    DD ++  K F+   +R+ V+WN+I+S+ +Q   F +A++   +M   G 
Sbjct: 317 LIDMYAK---CDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           K +  ++ S+L A + L  +  G+E+H + +RN +L  +  +GSALVDMY  C  VE   
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRN-LLNSDIILGSALVDMYSKCGMVEEAH 432

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VF  + ++    +NA++ GY Q    EEAL L+  M+   G+ P+  T ++++  C   
Sbjct: 433 QVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                   IH H I+  + ++  V+  L+ MYS  GR+  +K IF+ M  R+  SWN+MI
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 552

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY   G+  +AL L ++MQ        N +          KP+  +L ++L  C +LS 
Sbjct: 553 EGYQQNGETQEALRLFKQMQ-------LNGI----------KPDCFSLSSMLSSCVSLSD 595

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
             KG+E+H + +RN +  + ++   LVDMYAKCG +++A +V+D    ++VI  NV++ A
Sbjct: 596 SQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSA 655

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           +   G   +   L   M          + N   + ++ A  ++ G+  E  + F +M
Sbjct: 656 FVNSGRANDAKNLFDQM---------EQRNTALWNSILAGYANKGLKKESFNHFLEM 703



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 171/614 (27%), Positives = 292/614 (47%), Gaps = 52/614 (8%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           LLP+P   S   H    TT   L   G  +  K + I +  +                  
Sbjct: 26  LLPNPNSKSFSAHFGHTTTTIKLKFNGPDSP-KPTSIHTKPA------------------ 66

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK--CG 127
            SD+ P    + ++++          GK IH  ++  GY   +  +   L+ +Y +  C 
Sbjct: 67  -SDVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM-LYARSGCL 122

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+    K+F+ + E++  +WN+MI    R   +   L  +  M  S      FT  SV 
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVI 182

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC  +    G+R   Q+  + ++ G   N F+  AL+  YA+ G +DDA T     E  
Sbjct: 183 KACIAMEDMGGVR---QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT 239

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
            +V+WN +++   +   + EA     +M   G+ PD  + AS L  C  L   D GK++H
Sbjct: 240 SVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 299

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           +  +      D +FVG+AL+DMY  C + E   +VFD + ++    WN++I+   Q  + 
Sbjct: 300 SKLIACGFKGD-TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
            +AL+LF++M+E +G   N   + S++ A            +HGH ++  L  D  + +A
Sbjct: 359 NDALVLFLRMQE-SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMYS+ G +E +  +F  +  R+ VS+N ++ GY   G+  +AL L  +MQ+ +    
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG--- 474

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                         +P+  T  T+L  C       +G++IHA+ IR  +  +++V + LV
Sbjct: 475 -------------IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELV 521

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
            MY++CG LN+A+ +F+ M  RN  +WN +I  Y  +GE QE L L K M   G     +
Sbjct: 522 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-----I 576

Query: 607 KPNEVTFIALFAAC 620
           KP+  +  ++ ++C
Sbjct: 577 KPDCFSLSSMLSSC 590



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/580 (28%), Positives = 286/580 (49%), Gaps = 60/580 (10%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   + +EA+   F +A++ ++ M  S  + + F   ++L A AG+ D+  G+++
Sbjct: 340 RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGREL 399

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H H+V+     S + + + LV+MY KCG  + + ++VF  + E+++VS+N+++A   + G
Sbjct: 400 HGHLVRNLLN-SDIILGSALVDMYSKCGM-VEEAHQVFRSLLERNEVSYNALLAGYVQEG 457

Query: 160 KWDLALEAFR-MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           K + ALE +  M     ++P  FT  ++   C+N  R D    GRQ+H + +R     N 
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN-QRND--NQGRQIHAHLIRANITKNI 514

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            +   L+ MY++ GR++ AK +F    +R+  SWN+++    QN +  EA+   +QM L 
Sbjct: 515 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 574

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--- 334
           GIKPD  S++S+L +C  L     G+E+H + +RN  + +   +   LVDMY  C     
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVDMYAKCGSMDY 633

Query: 335 -----------------------VECGR-----RVFDFISDKKIALWNAMITGYGQNEYD 366
                                  V  GR      +FD +  +  ALWN+++ GY      
Sbjct: 634 AWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLK 693

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV-QN 425
           +E+   F++M E + +  +  TM ++V  C    A    + +H   IK G      V + 
Sbjct: 694 KESFNHFLEMLE-SDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DMYS+ G I  ++T+FD+M  ++ VSWN MI+GY+  G   +AL+L  EM       
Sbjct: 753 ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP------ 806

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSA 544
            +  +Y          PN +T + +L  C     + +G  I      +  +       + 
Sbjct: 807 -KKGMY----------PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 855

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +VD+  + G L  A+   + MP+   V TW  ++ A  +H
Sbjct: 856 MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 895


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/793 (39%), Positives = 468/793 (59%), Gaps = 40/793 (5%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
             K +HA +V  G  + S+ ++  LVN+Y   G D+      FD+I +KD  +WNSMI+ 
Sbjct: 134 FAKCLHALLVVAG-KVQSIFISTRLVNLYANLG-DVSLSRCTFDQIPQKDVYAWNSMISA 191

Query: 155 LCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
               G +  A+  F +++L S + P  +T   V  AC  L        GR++H  + ++G
Sbjct: 192 YVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD------GRKIHCWAFKLG 245

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            +WN F+  +L+ MY++ G    A++LF     RD+ SWN ++S L QN    +A+  L 
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L GIK + V++ S+LP C  L  + T   IH Y +++ +  D  FV +AL++MY   
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD-LFVSNALINMYAKF 364

Query: 333 REVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
             +E  R+ F   FI+D  +  WN++I  Y QN+    A   F+KM+ + G  P+  T+ 
Sbjct: 365 GNLEDARKAFQQMFITD--VVSWNSIIAAYEQNDDPVTAHGFFVKMQ-LNGFQPDLLTLV 421

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           S+     +S    +   +HG  ++ G L  D  + NA++DMY+++G ++ +  +F+ + V
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV 481

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D +SWNT+ITGY   G   +A+ + + M+  +E                  PN  T ++
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKE----------------IIPNQGTWVS 525

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +LP    + AL +G +IH   I+  L  DV V + L+D+Y KCG L  A  +F  +P  +
Sbjct: 526 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            +TWN II  +G+HG  ++ L+L   M+ EG     VKP+ VTF++L +ACSHSG V EG
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEG-----VKPDHVTFVSLLSACSHSGFVEEG 640

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              F ++  +YGI+PS  HY C+VDLLGRAG +E AY  I  MP + D A  W +LLGAC
Sbjct: 641 KWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD-ASIWGALLGAC 698

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           RIH N+E+G+ A+  LF ++     +YVLLSNIY++   W+    VR   +E G++K PG
Sbjct: 699 RIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPG 758

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
            S IE   ++  F  G+ SH + ++++  L  L+ +M+  GY+PD S VL +V E+EKE 
Sbjct: 759 WSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEH 818

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSE+LAIAFGI++TPP + IR+ KNLRVC DCH ATKFIS+I  REI++RD  RFH
Sbjct: 819 ILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFH 878

Query: 870 HFKNGTCSCGDYW 882
           HFK+G CSCGDYW
Sbjct: 879 HFKDGICSCGDYW 891



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 173/610 (28%), Positives = 293/610 (48%), Gaps = 43/610 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   + +   +  F EAI  + ++   S+I+PD + FP VLKA   + D   G++IH  
Sbjct: 184 AWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCW 240

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             K G+   +V VA +L++MY + G        +FD +  +D  SWN+MI+ L + G   
Sbjct: 241 AFKLGFQW-NVFVAASLIHMYSRFGF-TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 298

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+    M    ++ +  T+VS+   C  L     +     +H   ++ G E++ F+ N
Sbjct: 299 QALDVLDEMRLEGIKMNFVTVVSILPVCPQLG---DISTAMLIHLYVIKHGLEFDLFVSN 355

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK G ++DA+  F+     D+VSWN+I+++  QND  + A  F  +M L G +P
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++ S+    +        + +H + +R   L+++  +G+A+VDMY     ++   +V
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ I  K +  WN +ITGY QN    EA+ ++  MEE   + PN  T  S++PA     A
Sbjct: 476 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IHG  IK  L  D +V   L+D+Y + GR+  + ++F  +    +V+WN +I+ 
Sbjct: 536 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           + I G     L L  EM              LDE V   KP+ +T +++L  C     + 
Sbjct: 596 HGIHGHAEKTLKLFGEM--------------LDEGV---KPDHVTFVSLLSACSHSGFVE 638

Query: 522 KGKE----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           +GK     +  Y I+  L         +VD+  + G L  A      MP++ +   W  +
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHY----GCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGAL 694

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           + A  +HG     +EL K       R  EV    V +  L +    +    EG+D    +
Sbjct: 695 LGACRIHGN----IELGK---FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747

Query: 637 KDDYGIEPSP 646
             + G++ +P
Sbjct: 748 ARERGLKKTP 757



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 27/286 (9%)

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           P  + +H   +  G  +  ++   L+++Y+ +G + +S+  FD +  +D  +WN+MI+ Y
Sbjct: 133 PFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAY 192

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G   +A+    ++  + E                 +P+  T   VL  CG    L  
Sbjct: 193 VHNGHFHEAIGCFYQLLLVSE----------------IRPDFYTFPPVLKACG---TLVD 233

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G++IH +A +     +V V ++L+ MY++ G    AR +FD MP R++ +WN +I     
Sbjct: 234 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +G   + L++L  M  EG     +K N VT +++   C   G +S  M L +     +G+
Sbjct: 294 NGNAAQALDVLDEMRLEG-----IKMNFVTVVSILPVCPQLGDISTAM-LIHLYVIKHGL 347

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           E        ++++  + G +EDA +    M        +W+S++ A
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAA 391


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/836 (37%), Positives = 481/836 (57%), Gaps = 34/836 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR    S     A+       + DI P      +VL+  A  + L  GK++   +   G+
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGF 125

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            + S  + + L  MY  CG D+ +  +VFD +  +  + WN ++  L + G +  ++  F
Sbjct: 126 VIDS-NLGSKLSLMYTNCG-DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNALMAM 226
           + M+ S VE  S+T   V+ + S+L    G   G Q+HG  L+   GE N+ + N+L+A 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHG---GEQLHGFILKSGFGERNS-VGNSLVAF 239

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K  RVD A+ +F    +RD++SWN+I++    N    + +    QM + GI+ D  +I
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            SV   C+   ++  G+ +H+  ++     ++ F  + L+DMY  C +++  + VF  +S
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMS 358

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           D+ +  + +MI GY +     EA+ LF +MEE  G+ P+  T+++V+  C R     + +
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGK 417

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H    +  LG D +V NALMDMY++ G ++ ++ +F +M V+D +SWNT+I GY+   
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +AL L   +    EEK             R  P+  T+  VLP C +LSA  KG+EI
Sbjct: 478 YANEALSLFNLLL---EEK-------------RFSPDERTVACVLPACASLSAFDKGREI 521

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H Y +RN   +D  V ++LVDMYAKCG L  A  +FD +  +++++W V+I  YGMHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +E + L   M     R   ++ +E++F++L  ACSHSG+V EG   F  M+ +  IEP+ 
Sbjct: 582 KEAIALFNQM-----RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HYAC+VD+L R G +  AY+ I  MP   D A  W +LL  CRIH +V++ E  A+ +F
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPD-ATIWGALLCGCRIHHDVKLAEKVAEKVF 695

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEP+   +YVL++NIY+ A+ W++   +RK++ + G+RK PGCSWIE    ++ F+AGD
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            S+ ++E +  FL  +  RM +EGY P T   L +  E EKE  LCGHSEKLA+A GI++
Sbjct: 756 SSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIIS 815

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  G  IRV KNLRVC DCH+  KF+SK+  REI+LRD  RFH FK+G CSC  +W
Sbjct: 816 SGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S+   +   AR     EA+  + EM    I PD +   AVL   A  + L  GK++H  +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +   G   + V+N L++MY KCGS M +   VF  +  KD +SWN++I    +    + 
Sbjct: 424 KENDLGF-DIFVSNALMDMYAKCGS-MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 164 ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
           AL  F ++L      P   T+  V  AC++LS  D    GR++HG  +R G + +  + N
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK---GREIHGYIMRNGYFSDRHVAN 538

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK G +  A  LF     +DLVSW  +++    +    EA+    QM   GI+ 
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598

Query: 282 DGVSIASVLPACSHLEMLDTG 302
           D +S  S+L ACSH  ++D G
Sbjct: 599 DEISFVSLLYACSHSGLVDEG 619


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 330/841 (39%), Positives = 488/841 (58%), Gaps = 35/841 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ +++  F EA+  Y ++  S + PD + FP+V+KA AG+ D  +G  ++  ++
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+  S + V N LV+MY + G  +    +VFD +  +D VSWNS+I+     G ++ A
Sbjct: 134 DMGFE-SDLFVGNALVDMYSRMGL-LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-L 223
           LE +  +  S + P SFT+ SV  A  NL     ++ G+ +HG +L+ G  +  ++N  L
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLV---VKQGQGLHGFALKSGVNSVVVVNNGL 248

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPD 282
           +AMY K  R  DA+ +F   + RD VS+NT++    + +   E+V MFL    L   KPD
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN--LDQFKPD 306

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++++SVL AC HL  L   K I+ Y L+   +++++ V + L+D+Y  C ++   R VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVF 365

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  K    WN++I+GY Q+    EA+ LF KM  +     +  T   ++    R    
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADL 424

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              +G+H + IK G+  D  V NAL+DMY++ G +  S  IF  M   DTV+WNT+I+  
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G     L +  +M+  E                   P+  T +  LP C +L+A   
Sbjct: 485 VRFGDFATGLQVTTQMRKSE-----------------VVPDMATFLVTLPMCASLAAKRL 527

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKEIH   +R    +++ +G+AL++MY+KCGCL  + RVF+ M  R+V+TW  +I AYGM
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +GEG++ LE   +M   G     + P+ V FIA+  ACSHSG+V EG+  F KMK  Y I
Sbjct: 588 YGEGEKALETFADMEKSG-----IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYACVVDLL R+ K+  A + I  MP + D A  W+S+L ACR   ++E  E  +
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD-ASIWASVLRACRTSGDMETAERVS 701

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + +  L PD   + +L SN Y++ + WDK   +RK +K+  + K PG SWIE G  +H F
Sbjct: 702 RRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 761

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIA 821
            +GD S  QSE ++  LE L   M KEGY+PD   V  N+ EEE K  L+CGHSE+LAIA
Sbjct: 762 SSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIA 821

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+LNT PGT ++V KNLRVC DCH+ TK ISKI  REI++RD  RFH FK+GTCSC D 
Sbjct: 822 FGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDR 881

Query: 882 W 882
           W
Sbjct: 882 W 882



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 329/666 (49%), Gaps = 42/666 (6%)

Query: 81  PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI 140
           P + +A++   +L+  ++IHA V+  G   SS   +  L++ Y         +  VF R+
Sbjct: 8   PFISRALSSSSNLNELRRIHALVISLGLD-SSDFFSGKLIDKYSHFREPASSL-SVFRRV 65

Query: 141 TEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +    V  WNS+I    + G +  ALE +  +  S V P  +T  SV  AC+ L   +  
Sbjct: 66  SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE-- 123

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            +G  V+   L +G E + F+ NAL+ MY+++G +  A+ +F     RDLVSWN+++S  
Sbjct: 124 -MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S +  + EA+    ++    I PD  +++SVLPA  +L ++  G+ +H +AL++ +    
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             V + LV MY   R     RRVFD +  +    +N MI GY + E  EE++ +F  +E 
Sbjct: 243 V-VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LEN 299

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +    P+  T+SSV+ AC         + I+ + +K G   +  V+N L+D+Y++ G + 
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++ +F+ ME +DTVSWN++I+GY   G   +A+ L + M  MEE+ +            
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH----------- 408

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
                 IT + ++     L+ L  GK +H+  I++ +  D+ V +AL+DMYAKCG +  +
Sbjct: 409 ------ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            ++F  M   + +TWN +I A    G+    L++   M     R  EV P+  TF+    
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM-----RKSEVVPDMATFLVTLP 517

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            C+       G ++   +   +G E        ++++  + G +E++ ++   M      
Sbjct: 518 MCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR--D 574

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD--VASHYVLLSNIY--SSAQLWDKAMD 734
              W+ ++ A  ++     GE A +    +E    V    V ++ IY  S + L D+ + 
Sbjct: 575 VVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631

Query: 735 VRKKMK 740
             +KMK
Sbjct: 632 CFEKMK 637



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 166/584 (28%), Positives = 280/584 (47%), Gaps = 52/584 (8%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T VS       LS    L   R++H   + +G + + F    L+  Y+       + ++F
Sbjct: 3   TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62

Query: 241 KSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           +     +++  WN+I+ + S+N  F EA+ F  ++    + PD  +  SV+ AC+ L   
Sbjct: 63  RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G  ++   L      D  FVG+ALVDMY     +   R+VFD +  + +  WN++I+G
Sbjct: 123 EMGDLVYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181

Query: 360 YGQNEYDEEALMLFIKMEEVAGLW--PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           Y  + Y EEAL ++    E+   W  P++ T+SSV+PA          +G+HG A+K G+
Sbjct: 182 YSSHGYYEEALEIY---HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
                V N L+ MY +  R   ++ +FD+M+VRD+VS+NTMI GY         L L   
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY---------LKL--- 286

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
              M EE  R  + +LD+     KP+ +T+ +VL  CG L  L+  K I+ Y ++     
Sbjct: 287 --EMVEESVRMFLENLDQF----KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +  V + L+D+YAKCG +  AR VF+ M  ++ ++WN II  Y   G+  E ++L K M+
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLL 656
                  E + + +T++ L +  +    +  G  L    +K    I+ S  +   ++D+ 
Sbjct: 401 IM-----EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMY 453

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE--PDVAS 714
            + G+V D+ ++ + M         W++++ AC    +   G      +   E  PD+A+
Sbjct: 454 AKCGEVGDSLKIFSSMGT--GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             V L    S A             K +G  KE  C  + FG E
Sbjct: 512 FLVTLPMCASLAA------------KRLG--KEIHCCLLRFGYE 541



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 253/551 (45%), Gaps = 40/551 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +    + EA+  Y E+  S I PD+F   +VL A   +  +  G+ +H   
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     S V V N LV MY K      D  +VFD +  +D VS+N+MI   C + K ++
Sbjct: 234 LK-SGVNSVVVVNNGLVAMYLKFRRPT-DARRVFDEMDVRDSVSYNTMI---CGYLKLEM 288

Query: 164 ALEAFRMML--YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             E+ RM L      +P   T+ SV  AC +L  RD L L + ++   L+ G    + + 
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVLRACGHL--RD-LSLAKYIYNYMLKAGFVLESTVR 345

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ +YAK G +  A+ +F S E +D VSWN+I+S   Q+   +EA+   + M +   +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D ++   ++   + L  L  GK +H+  +++ I ID S V +AL+DMY  C EV    +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS-VSNALIDMYAKCGEVGDSLK 464

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  +       WN +I+   +       L +  +M + + + P+  T    +P C    
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDMATFLVTLPMCASLA 523

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + IH   ++ G   +  + NAL++MYS+ G +E S  +F+ M  RD V+W  MI 
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y   G +G+    L    +ME+                  P+S+  + ++  C     +
Sbjct: 584 AY---GMYGEGEKALETFADMEKSG--------------IVPDSVVFIAIIYACSHSGLV 626

Query: 521 AKG-----KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
            +G     K    Y I  M+     V    VD+ ++   ++ A      MP++ +   W 
Sbjct: 627 DEGLACFEKMKTHYKIDPMIEHYACV----VDLLSRSQKISKAEEFIQAMPIKPDASIWA 682

Query: 575 VIIMAYGMHGE 585
            ++ A    G+
Sbjct: 683 SVLRACRTSGD 693


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/793 (39%), Positives = 467/793 (58%), Gaps = 40/793 (5%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
             K +HA +V  G  + S+ ++  LVN+Y   G D+      FD+I +KD  +WNSMI+ 
Sbjct: 134 FAKCLHALLVVAG-KVQSIFISTRLVNLYANLG-DVSLSRCTFDQIPQKDVYTWNSMISA 191

Query: 155 LCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
               G +  A+  F +++L S + P  +T   V  AC  L        GR++H  + ++G
Sbjct: 192 YVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD------GRRIHCWAFKLG 245

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            +WN F+  +L+ MY++ G    A++LF     RD+ SWN ++S L QN    +A+  L 
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L GIK + V++ S+LP C  L  + T   IH Y +++ +  D  FV +AL++MY   
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD-LFVSNALINMYAKF 364

Query: 333 REVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
             +E  R+ F   FI+D  +  WN++I  Y QN+    A   F+KM+ + G  P+  T+ 
Sbjct: 365 GNLEDARKAFQQMFITD--VVSWNSIIAAYEQNDDPVTAHGFFVKMQ-LNGFQPDLLTLV 421

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           S+     +S    +   +HG  ++ G L  D  + NA++DMY+++G ++ +  +F+ + V
Sbjct: 422 SLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILV 481

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D +SWNT+ITGY   G   +A+ + + M+  +E                  PN  T ++
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKE----------------IIPNQGTWVS 525

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +LP    + AL +G  IH   I+  L  DV V + L+D+Y KCG L  A  +F  +P  +
Sbjct: 526 ILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            +TWN II  +G+HG  ++ L+L   M+ EG     VKP+ VTF++L +ACSHSG V EG
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEG-----VKPDHVTFVSLLSACSHSGFVEEG 640

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              F ++  +YGI+PS  HY C+VDLLGRAG +E AY  I  MP + D A  W +LLGAC
Sbjct: 641 KWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPD-ASIWGALLGAC 698

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           RIH N+E+G+ A+  LF ++     +YVLLSNIY++   W+    VR   +E G++K PG
Sbjct: 699 RIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPG 758

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
            S IE   ++  F  G+ SH + ++++  L  L+ +M+  GY+PD S VL +V E+EKE 
Sbjct: 759 WSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEH 818

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSE+LAIAFGI++TPP + IR+ KNLRVC DCH ATKFIS+I  REI++RD  RFH
Sbjct: 819 ILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFH 878

Query: 870 HFKNGTCSCGDYW 882
           HFK+G CSCGDYW
Sbjct: 879 HFKDGICSCGDYW 891



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 173/610 (28%), Positives = 293/610 (48%), Gaps = 43/610 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   + +   +  F EAI  + ++   S+I+PD + FP VLKA   + D   G++IH  
Sbjct: 184 TWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCW 240

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             K G+   +V VA +L++MY + G        +FD +  +D  SWN+MI+ L + G   
Sbjct: 241 AFKLGFQW-NVFVAASLIHMYSRFGFTG-IARSLFDDMPFRDMGSWNAMISGLIQNGNAA 298

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+    M    ++ +  T+VS+   C  L     +     +H   ++ G E++ F+ N
Sbjct: 299 QALDVLDEMRLEGIKMNFVTVVSILPVCPQLG---DISTAMLIHLYVIKHGLEFDLFVSN 355

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK G ++DA+  F+     D+VSWN+I+++  QND  + A  F  +M L G +P
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++ S+    +        + +H + +R   L+++  +G+A+VDMY     ++   +V
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ I  K +  WN +ITGY QN    EA+ ++  MEE   + PN  T  S++PA     A
Sbjct: 476 FEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IHG  IK  L  D +V   L+D+Y + GR+  + ++F  +    +V+WN +I+ 
Sbjct: 536 LQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           + I G     L L  EM              LDE V   KP+ +T +++L  C     + 
Sbjct: 596 HGIHGHAEKTLKLFGEM--------------LDEGV---KPDHVTFVSLLSACSHSGFVE 638

Query: 522 KGKE----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           +GK     +  Y I+  L         +VD+  + G L  A      MP++ +   W  +
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHY----GCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGAL 694

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           + A  +HG     +EL K       R  EV    V +  L +    +    EG+D    +
Sbjct: 695 LGACRIHGN----IELGK---FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747

Query: 637 KDDYGIEPSP 646
             + G++ +P
Sbjct: 748 ARERGLKKTP 757



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 27/290 (9%)

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S   P  + +H   +  G  +  ++   L+++Y+ +G + +S+  FD +  +D  +WN+M
Sbjct: 129 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSM 188

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+ Y   G   +A+    ++  + E                 +P+  T   VL  CG   
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSE----------------IRPDFYTFPPVLKACG--- 229

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            L  G+ IH +A +     +V V ++L+ MY++ G    AR +FD MP R++ +WN +I 
Sbjct: 230 TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
               +G   + L++L  M  EG     +K N VT +++   C   G +S  M L +    
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEG-----IKMNFVTVVSILPVCPQLGDISTAM-LIHLYVI 343

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            +G+E        ++++  + G +EDA +    M        +W+S++ A
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAA 391


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 320/829 (38%), Positives = 482/829 (58%), Gaps = 37/829 (4%)

Query: 58  FREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           F EA+  Y EM   D  Q  NF FP+VLKA +G  DLS+G ++H  V+K G+  S   V 
Sbjct: 80  FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFE-SDAVVE 138

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
            +L+ MYG+  S + D  K FD +  +D V+W+S++    + G+    L+ F  M+   V
Sbjct: 139 TSLLCMYGEM-SCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
           EP S T++SV  ACS L     LRLGR VHG  +R   E N  + N+L+ MY KLG +  
Sbjct: 198 EPDSVTMLSVTEACSELG---SLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYS 254

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ LF++   R    W  ++S  +Q+  F EA+    +M    ++P+ V++  VL AC+ 
Sbjct: 255 AERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACAR 314

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L  +  G+ +H + +R  +  +  F+G AL+++Y +   +    +VF+ I +K I  WN 
Sbjct: 315 LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 374

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +I+ + +N   EEAL+LF++M+   GL P++ +++S + AC           IHG+ IK 
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQ-TQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKT 433

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G   D +VQNAL+DMY++ G +  +  +F+ ++ +  V+WN+MI G++  G   +A+ L 
Sbjct: 434 GNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 492

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +M          N   +D+         +T ++V+  C  L  L KGK +H   I   L
Sbjct: 493 DQMYM--------NCVKMDK---------LTFLSVIQACSHLGYLEKGKWVHHKLIMYGL 535

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             D  + +AL DMY+KCG L  A  VFD M  R++++W+V+I  YGMHG+    + L   
Sbjct: 536 RKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQ 595

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M+  G     +KPN++TF+ + +ACSH+G V EG  L++    ++G+EP  DH+AC+VDL
Sbjct: 596 MLGSG-----IKPNDITFMHILSACSHAGAVEEG-KLYFNSMSEFGVEPKHDHFACMVDL 649

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           L RAG +  AYQ+I  +P   + +  W +LL  CRIH+ ++I +   +NL  ++     +
Sbjct: 650 LSRAGDLNGAYQIITSLPFPANSS-IWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGY 708

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           Y LLSNIY+    WDK   VR  MK  G+RK PG S IE   +I++F  GD SH Q++ +
Sbjct: 709 YTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDI 768

Query: 776 HGFLENLSERMRKEGY--VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           + FLEN    +  + Y   PD S V    ++  KE  +  HSEKLAIAFGI+NT PGTT+
Sbjct: 769 YRFLENFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGIINTRPGTTL 826

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R++KNLRVC DCH   K  SKI  REII+RD+ RFH F+NG+CSC DYW
Sbjct: 827 RISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 278/557 (49%), Gaps = 28/557 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +  ++ Q  E +  + +M    ++PD+    +V +A + +  L LG+ +H +V
Sbjct: 168 AWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYV 227

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+     S+ ++ N+L+ MYGK G D++   ++F+ +  +    W  MI+   + G +  
Sbjct: 228 VRREIE-SNASLNNSLIVMYGKLG-DLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMN 221
           AL  F  M    +EP+  T+V V  AC+ L R   ++ GR VHG  +R  +     F+  
Sbjct: 286 ALNVFAKMQEFKMEPNQVTMVGVLCACARLGR---VKEGRSVHGFVIRRAMDPELDFLGP 342

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           ALM +YA  G + D   +F++ +++ ++SWNT++S  ++N +  EA++   QM  +G+ P
Sbjct: 343 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMP 402

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  S+AS L AC  +     G +IH Y ++      N FV +AL+DMY  C  V    ++
Sbjct: 403 DSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF--NDFVQNALIDMYAKCGFVHSANKM 460

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ I +K +  WN+MI G+ QN Y  EA+ LF +M  +  +  +  T  SV+ AC     
Sbjct: 461 FEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM-YMNCVKMDKLTFLSVIQACSHLGY 519

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H   I  GL +D Y+  AL DMYS+ G ++++  +FD M  R  VSW+ MI G
Sbjct: 520 LEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAG 579

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y + GQ    + L  +M              L   +   KPN IT M +L  C    A+ 
Sbjct: 580 YGMHGQINATISLFNQM--------------LGSGI---KPNDITFMHILSACSHAGAVE 622

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAY 580
           +GK          +       + +VD+ ++ G LN A ++   +P   N   W  ++   
Sbjct: 623 EGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 682

Query: 581 GMHGEGQEVLELLKNMV 597
            +H     +  + KN++
Sbjct: 683 RIHKRIDIIKSIEKNLL 699



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 303/602 (50%), Gaps = 38/602 (6%)

Query: 98  QIHAHVVKYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           Q+HAH+  +  GL     A+T L+  Y + G       +VFD   + D   W  +I    
Sbjct: 19  QLHAHL--FITGLHRHPPASTKLIESYAQIGI-FESSKRVFDTFPKPDSFMWGVLIKCYV 75

Query: 157 RFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
             G ++ A+  +  M+Y +  + S+F   SV  ACS       L +G +VHG  ++ G E
Sbjct: 76  WGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFG---DLSVGGKVHGRVIKCGFE 132

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  +  +L+ MY ++  +DDA   F +   RD+V+W++IV +  QN +  E +    QM
Sbjct: 133 SDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM 192

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
               ++PD V++ SV  ACS L  L  G+ +H Y +R +I   N+ + ++L+ MY    +
Sbjct: 193 ISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIE-SNASLNNSLIVMYGKLGD 251

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +    R+F+ +  +  A W  MI+ Y Q+   +EAL +F KM+E   + PN  TM  V+ 
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFK-MEPNQVTMVGVLC 310

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRD-RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           AC R     +   +HG  I+  +  +  ++  ALM++Y+  G +     +F+ ++ +  +
Sbjct: 311 ACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTIL 370

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWNT+I+ +T  GQ  +AL+L  +MQ                      P+S +L + L  
Sbjct: 371 SWNTLISIFTRNGQPEEALLLFVQMQTQG-----------------LMPDSYSLASSLSA 413

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           CG +S    G +IH Y I+     D  V +AL+DMYAKCG ++ A ++F+ +  ++++TW
Sbjct: 414 CGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTW 472

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  +  +G   E + L   M         VK +++TF+++  ACSH G + +G  + 
Sbjct: 473 NSMICGFSQNGYSVEAITLFDQMYMNC-----VKMDKLTFLSVIQACSHLGYLEKGKWVH 527

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
           +K+   YG+         + D+  + G+++ A+ + + M        +WS ++    +H 
Sbjct: 528 HKLI-MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSER--SIVSWSVMIAGYGMHG 584

Query: 694 NV 695
            +
Sbjct: 585 QI 586



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 10/182 (5%)

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           I  M +   C   + L    ++HA+     L       + L++ YA+ G    ++RVFD 
Sbjct: 2   ILYMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDT 58

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            P  +   W V+I  Y   G  +E + L   MV +     + + +   F ++  ACS  G
Sbjct: 59  FPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQ----DQTQISNFVFPSVLKACSGFG 114

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
            +S G  +  ++    G E        ++ + G    ++DA +  + MP       AWSS
Sbjct: 115 DLSVGGKVHGRVI-KCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP--IRDVVAWSS 171

Query: 685 LL 686
           ++
Sbjct: 172 IV 173


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/811 (37%), Positives = 467/811 (57%), Gaps = 43/811 (5%)

Query: 79   AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
            A+ ++L+  A  + L  GK +H+ +   G  +  V  A  LV MY  CG+ + +  ++FD
Sbjct: 453  AYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAK-LVFMYVSCGA-LREGRRIFD 510

Query: 139  RITEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
             I   ++V  WN M++   + G +  ++  F+ M    +  +S+T   +    + L R  
Sbjct: 511  HILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR-- 568

Query: 198  GLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             +   +++HG    L  G +NT ++N+L+A Y K G VD A  LF    DRD+VSWN+++
Sbjct: 569  -VGECKRIHGCVYKLGFGSYNT-VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626

Query: 256  SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR---- 311
            S    N     A+ F  QM +  +  D  ++ + + AC+++  L  G+ +H   ++    
Sbjct: 627  SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 686

Query: 312  NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             +++ +N+     L+DMY  C  +    + F+ +  K +  W ++I  Y +    ++A+ 
Sbjct: 687  REVMFNNT-----LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIR 741

Query: 372  LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
            LF +ME   G+ P+  +M+SV+ AC    +      +H +  K  +     V NALMDMY
Sbjct: 742  LFYEMES-KGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMY 800

Query: 432  SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            ++ G +E +  +F  + V+D VSWNTMI GY+      +AL L  EMQ            
Sbjct: 801  AKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK----------- 849

Query: 492  DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                     +P+ IT+  +LP CG+L+AL  G+ IH   +RN  ++++ V +AL+DMY K
Sbjct: 850  -------ESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902

Query: 552  CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            CG L  AR +FD++P +++ITW V+I   GMHG G E +   + M   G     +KP+E+
Sbjct: 903  CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAG-----IKPDEI 957

Query: 612  TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
            TF ++  ACSHSG+++EG   F  M  +  +EP  +HYAC+VDLL R G +  AY LI  
Sbjct: 958  TFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIET 1017

Query: 672  MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
            MP + D A  W +LL  CRIH +VE+ E  A+++F LEPD A +YVLL+NIY+ A+ W++
Sbjct: 1018 MPIKPD-ATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEE 1076

Query: 732  AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
               +R+++ + G++K PGCSWIE   +   F++ D +H Q++ +   L NL  +M+ EG+
Sbjct: 1077 VKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGH 1136

Query: 792  VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
             P     L N  + EKE  LCGHSEKLA+AFGILN P G TIRVAKNLRVC+DCH+  KF
Sbjct: 1137 SPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKF 1196

Query: 852  ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +SK   REIILRD  RFHHFK+G CSC D+W
Sbjct: 1197 MSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/583 (29%), Positives = 285/583 (48%), Gaps = 45/583 (7%)

Query: 45   WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
            W   +   A+   +RE+I  + +M +  I  +++ F  +LK  A +  +   K+IH  V 
Sbjct: 521  WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVY 580

Query: 105  KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            K G+G S  TV N+L+  Y K G ++   +K+FD + ++D VSWNSMI+     G    A
Sbjct: 581  KLGFG-SYNTVVNSLIATYFKSG-EVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSA 638

Query: 165  LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
            LE F  ML   V     TLV+   AC+N+     L LGR +HG  ++          N L
Sbjct: 639  LEFFVQMLILRVGVDLATLVNSVAACANVG---SLSLGRALHGQGVKACFSREVMFNNTL 695

Query: 224  MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            + MY+K G ++DA   F+    + +VSW +++++  +   + +A+    +M  +G+ PD 
Sbjct: 696  LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755

Query: 284  VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
             S+ SVL AC+    LD G+++H Y  +N++ +    V +AL+DMY  C  +E    VF 
Sbjct: 756  YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLP-VSNALMDMYAKCGSMEEAYLVFS 814

Query: 344  FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
             I  K I  WN MI GY +N    EAL LF +M++ +   P+  TM+ ++PAC    A  
Sbjct: 815  QIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACGSLAALE 872

Query: 404  DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               GIHG  ++ G   + +V NAL+DMY + G +  ++ +FD +  +D ++W  MI+G  
Sbjct: 873  IGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG-- 930

Query: 464  ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             CG HG     +   Q M               +   KP+ IT  ++L  C     L +G
Sbjct: 931  -CGMHGLGNEAIATFQKMR--------------IAGIKPDEITFTSILYACSHSGLLNEG 975

Query: 524  KEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYG 581
                   I    +   +   + +VD+ A+ G L+ A  + + MP++ +   W  ++    
Sbjct: 976  WGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCR 1035

Query: 582  MHGE-------GQEVLE----------LLKNMVAEGSRGGEVK 607
            +H +        + V E          LL N+ AE  +  EVK
Sbjct: 1036 IHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVK 1078



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 138/262 (52%), Gaps = 11/262 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  R   + +AI  + EM    + PD ++  +VL A A    L  G+ +H ++
Sbjct: 722 SWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI 781

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    L  + V+N L++MY KCGS M + Y VF +I  KD VSWN+MI     + K  L
Sbjct: 782 RKNNMAL-CLPVSNALMDMYAKCGS-MEEAYLVFSQIPVKDIVSWNTMIGG---YSKNSL 836

Query: 164 ALEAFRMM--LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IM 220
             EA ++   +     P   T+  +  AC +L+    L +GR +HG  LR G  +   + 
Sbjct: 837 PNEALKLFAEMQKESRPDGITMACLLPACGSLA---ALEIGRGIHGCILRNGYSSELHVA 893

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NAL+ MY K G +  A+ LF    ++DL++W  ++S    +    EA+   ++M + GIK
Sbjct: 894 NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 953

Query: 281 PDGVSIASVLPACSHLEMLDTG 302
           PD ++  S+L ACSH  +L+ G
Sbjct: 954 PDEITFTSILYACSHSGLLNEG 975


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 309/838 (36%), Positives = 485/838 (57%), Gaps = 37/838 (4%)

Query: 45   WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            W   + S +R+  + E + ++IEM + +D+ PD+F +P V+KA AG+ D+ +G  +H  V
Sbjct: 509  WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 568

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            VK G  +  V V N LV+ YG  G  + D  ++FD + E++ VSWNSMI      G  + 
Sbjct: 569  VKTGL-VEDVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 626

Query: 164  ALEAFRMMLYSNVE----PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
            +      M+  N +    P   TLV+V   C+   R   + LG+ VHG ++++      +
Sbjct: 627  SFLLLGEMMEENGDGAFMPDVATLVTVLPVCA---REREIGLGKGVHGWAVKLRLDKELV 683

Query: 220  MN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +N ALM MY+K G + +A+ +FK   ++++VSWNT+V   S           LRQM   G
Sbjct: 684  LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 743

Query: 279  --IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
              +K D V+I + +P C H   L + KE+H Y+L+ +  + N  V +A V  Y  C  + 
Sbjct: 744  EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLS 802

Query: 337  CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              +RVF  I  K +  WNA+I G+ Q+     +L   ++M+ ++GL P++ T+ S++ AC
Sbjct: 803  YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLSAC 861

Query: 397  VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             + ++    + +HG  I+  L RD +V  +++ +Y   G +   + +FD ME +  VSWN
Sbjct: 862  SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 921

Query: 457  TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            T+ITGY   G    AL + R+M           +Y +           I++M V   C  
Sbjct: 922  TVITGYLQNGFPDRALGVFRQMV----------LYGIQLC-------GISMMPVFGACSL 964

Query: 517  LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
            L +L  G+E HAYA++++L  D  +  +L+DMYAK G +  + +VF+ +  ++  +WN +
Sbjct: 965  LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 1024

Query: 577  IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
            IM YG+HG  +E ++L + M   G       P+++TF+ +  AC+HSG++ EG+    +M
Sbjct: 1025 IMGYGIHGLAKEAIKLFEEMQRTGH-----NPDDLTFLGVLTACNHSGLIHEGLRYLDQM 1079

Query: 637  KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
            K  +G++P+  HYACV+D+LGRAG+++ A +++     E    G W SLL +CRIHQN+E
Sbjct: 1080 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 1139

Query: 697  IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
            +GE  A  LF LEP+   +YVLLSN+Y+    W+    VR++M EM +RK+ GCSWIE  
Sbjct: 1140 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 1199

Query: 757  DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
             ++  F+ G+      E++      L  ++ K GY PDT  V H+++EEEK   L GHSE
Sbjct: 1200 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 1259

Query: 817  KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
            KLA+ +G++ T  GTTIRV KNLR+C DCH A K ISK+  REI++RD +RFHHFKNG
Sbjct: 1260 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/629 (25%), Positives = 295/629 (46%), Gaps = 53/629 (8%)

Query: 79   AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
            A   +L+A    +D+ +G++IH  V       +   +   ++ MY  CGS   D   VFD
Sbjct: 441  ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD-DSRFVFD 499

Query: 139  RITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRD 197
             +  K+   WN++I++  R   +D  LE F  M+  +++ P  FT   V  AC+ +S   
Sbjct: 500  ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS--- 556

Query: 198  GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
             + +G  VHG  ++ G   + F+ NAL++ Y   G V DA  LF    +R+LVSWN+++ 
Sbjct: 557  DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616

Query: 257  SLSQNDKFLEAVMFLRQMALR----GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
              S N    E+ + L +M          PD  ++ +VLP C+    +  GK +H +A++ 
Sbjct: 617  VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK- 675

Query: 313  DILIDNSFV-GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             + +D   V  +AL+DMY  C  +   + +F   ++K +  WN M+ G+   E D     
Sbjct: 676  -LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA-EGDTHGTF 733

Query: 372  LFIKMEEVAG--LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
              ++     G  +  +  T+ + VP C      P  + +H +++K     +  V NA + 
Sbjct: 734  DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 793

Query: 430  MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
             Y++ G +  ++ +F  +  +   SWN +I G+    Q  D  + L     M+       
Sbjct: 794  SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH---AQSNDPRLSLDAHLQMK------- 843

Query: 490  VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                   +    P+S T+ ++L  C  L +L  GKE+H + IRN L  D+ V  +++ +Y
Sbjct: 844  -------ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 896

Query: 550  AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
              CG L   + +FD M  +++++WN +I  Y  +G     L + + MV  G     ++  
Sbjct: 897  IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-----IQLC 951

Query: 610  EVTFIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYAC-VVDLLGRAGKVE 663
             ++ + +F ACS       G  +    L + ++DD  I       AC ++D+  + G + 
Sbjct: 952  GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI-------ACSLIDMYAKNGSIT 1004

Query: 664  DAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             + ++ N +  +     +W++++    IH
Sbjct: 1005 QSSKVFNGLKEK--STASWNAMIMGYGIH 1031



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 238/480 (49%), Gaps = 32/480 (6%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPS-SFTLVSVALAC--SNLSRRDGLRLGRQVH-- 206
           I+  C  G  D +    +  +  +   S +F LV  AL        +R  + +GR++H  
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464

Query: 207 -GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              S R+   +  +   ++ MYA  G  DD++ +F +   ++L  WN ++SS S+N+ + 
Sbjct: 465 VSGSTRLRN-DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 523

Query: 266 EAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
           E +  F+  ++   + PD  +   V+ AC+ +  +  G  +H   ++   L+++ FVG+A
Sbjct: 524 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG-LVEDVFVGNA 582

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG--- 381
           LV  Y     V    ++FD + ++ +  WN+MI  +  N + EE+ +L  +M E  G   
Sbjct: 583 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 642

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
             P+  T+ +V+P C R       +G+HG A+KL L ++  + NALMDMYS+ G I  ++
Sbjct: 643 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 702

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF     ++ VSWNTM+ G++  G       +LR+M    E+                K
Sbjct: 703 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV---------------K 747

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            + +T++  +P C   S L   KE+H Y+++     + +V +A V  YAKCG L++A+RV
Sbjct: 748 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 807

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  +  + V +WN +I  +    + +  L+    M   G     + P+  T  +L +ACS
Sbjct: 808 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG-----LLPDSFTVCSLLSACS 862



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 143/268 (53%), Gaps = 6/268 (2%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G +++   SW   +   A+SN  R ++ ++++M  S + PD+F   ++L A + ++ L L
Sbjct: 810  GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 869

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            GK++H  +++  +    + V  +++++Y  CG ++  V  +FD + +K  VSWN++I   
Sbjct: 870  GKEVHGFIIR-NWLERDLFVYLSVLSLYIHCG-ELCTVQALFDAMEDKSLVSWNTVITGY 927

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
             + G  D AL  FR M+   ++    +++ V  ACS L     LRLGR+ H  +L+ + E
Sbjct: 928  LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP---SLRLGREAHAYALKHLLE 984

Query: 215  WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
             + FI  +L+ MYAK G +  +  +F   +++   SWN ++     +    EA+    +M
Sbjct: 985  DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 1044

Query: 275  ALRGIKPDGVSIASVLPACSHLEMLDTG 302
               G  PD ++   VL AC+H  ++  G
Sbjct: 1045 QRTGHNPDDLTFLGVLTACNHSGLIHEG 1072


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/750 (38%), Positives = 437/750 (58%), Gaps = 30/750 (4%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VFD+I +   V WN MI T    G +  ++  +  ML   V P++FT   +  ACS+L  
Sbjct: 63  VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSL-- 120

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF--EDRDLVSWN 252
              L+LGR +H ++  +G   + ++  AL+ MYAK G +  A+TLF S   +DRD+V+WN
Sbjct: 121 -QALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++++ S +    + +  + QM   G+ P+  ++ S+LP       L  GK IHAY +RN
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
               DN  + +AL+DMY  C  +   R++F+ ++ K    W+AMI GY  ++   +AL L
Sbjct: 240 -FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           +  M  + GL P   T+++++ AC +       + +H H IK G+  D  V N+L+ MY+
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G ++ +    D+M  +DTVS++ +I+G    G    AL++ R+MQ+            
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG---------- 408

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                    P   T++ +LP C  L+AL  G   H Y +      D  + +A++DMY+KC
Sbjct: 409 -------IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +  +R +FD M  R++I+WN +I+ YG+HG   E L L + + A G     +KP++VT
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG-----LKPDDVT 516

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            IA+ +ACSHSG+V+EG   F  M  ++ I+P   HY C+VDLL RAG +++AY  I  M
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P        W +LL ACR H+N+E+GE  ++ + LL P+   ++VL+SNIYSS   WD A
Sbjct: 577 P-FVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDA 635

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             +R   +  G +K PGCSW+E    IH F+ G  SH QS  ++  L+ L  +M+K GY 
Sbjct: 636 AYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYR 695

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
            D+S VLH+V EEEKE +L  HSEK+AIAFGILNT P + I V KNLR+C DCH A KFI
Sbjct: 696 ADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFI 755

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +  REI +RD  RFHHFK+G C+C D+W
Sbjct: 756 TLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/566 (29%), Positives = 292/566 (51%), Gaps = 33/566 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ A S  F+++I  Y+ M +  + P NF FP +LKA + +Q L LG+ IH H  
Sbjct: 75  WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWD 162
             G  +  + V+  L++MY KCG  ++    +F+ I+ +D+  V+WN+MIA         
Sbjct: 135 ILGLSM-DLYVSTALLHMYAKCG-HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHA 192

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
             + +   M  + V P+S TLVS+      + + + L  G+ +H   +R   + N  +  
Sbjct: 193 QTIHSVAQMQQAGVTPNSSTLVSIL---PTIGQANALHQGKAIHAYYIRNFFFDNVVLQT 249

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIK 280
           AL+ MYAK   +  A+ +F +   ++ V W+ ++     +D   +A+     M  + G+ 
Sbjct: 250 ALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLN 309

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P   ++A++L AC+ L  L  GK++H + +++ + +D + VG++L+ MY  C  ++    
Sbjct: 310 PTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT-VGNSLISMYAKCGIMDNAVG 368

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
             D +  K    ++A+I+G  QN Y E+AL++F +M+  +G+ P   TM +++PAC    
Sbjct: 369 FLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS-SGIAPYLETMIALLPACSHLA 427

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A       HG+ +  G   D  + NA++DMYS+ G+I IS+ IFD M+ RD +SWNTMI 
Sbjct: 428 ALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMII 487

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY I G   +AL L +E+Q                  L  KP+ +TL+ VL  C     +
Sbjct: 488 GYGIHGLCVEALSLFQELQ-----------------ALGLKPDDVTLIAVLSACSHSGLV 530

Query: 521 AKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIM 578
            +GK   +   +N  +   +     +VD+ A+ G L+ A      MP V NV  W  ++ 
Sbjct: 531 TEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLA 590

Query: 579 AYGMHGE---GQEVLELLKNMVAEGS 601
           A   H     G++V + ++ +  EG+
Sbjct: 591 ACRTHKNIEMGEQVSKKIQLLGPEGT 616



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 218/444 (49%), Gaps = 36/444 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F       +V WN ++ + + +  F +++     M   G+ P   +   +L ACS 
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS--DKKIALW 353
           L+ L  G+ IH +A    + +D  +V +AL+ MY  C  +   + +F+ IS  D+ I  W
Sbjct: 120 LQALQLGRLIHTHAHILGLSMD-LYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           NAMI  +  +    + +    +M++ AG+ PN++T+ S++P   ++ A    + IH + I
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQ-AGVTPNSSTLVSILPTIGQANALHQGKAIHAYYI 237

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           +     +  +Q AL+DMY++   +  ++ IF+ +  ++ V W+ MI GY +     DAL 
Sbjct: 238 RNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALA 297

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  +M           +Y L+       P   TL T+L  C  L+ L +GK++H + I++
Sbjct: 298 LYDDML---------CIYGLN-------PTPATLATMLRACAQLTDLKRGKKLHCHMIKS 341

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            +  D  VG++L+ MYAKCG ++ A    D M  ++ ++++ II     +G  ++ L + 
Sbjct: 342 GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIF 401

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSH-----SGMVSEGMDLFYKMKDDYGIEPSPDH 648
           + M + G     + P   T IAL  ACSH      G    G  +     +D  I  +   
Sbjct: 402 RQMQSSG-----IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNA--- 453

Query: 649 YACVVDLLGRAGKVEDAYQLINMM 672
              ++D+  + GK+  + ++ + M
Sbjct: 454 ---IIDMYSKCGKITISREIFDRM 474



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 40/372 (10%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M +R +K + VSI  +     H ++       H + +      D+    + L   + +  
Sbjct: 1   MRIRCLKREVVSILLINWRQRHRQIRSFSPHPHPHRVS-----DSDAAATQLARYHISRN 55

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           E++  R VFD I    + LWN MI  Y  +   ++++ L++ M ++ G+ P   T   ++
Sbjct: 56  EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQL-GVTPTNFTFPFLL 114

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRD 451
            AC   +A      IH HA  LGL  D YV  AL+ MY++ G +  ++T+F+ +  + RD
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+WN MI  ++    H   +  + +MQ                      PNS TL+++L
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAG-----------------VTPNSSTLVSIL 217

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           P  G  +AL +GK IHAY IRN    +VV+ +AL+DMYAKC  L +AR++F+ +  +N +
Sbjct: 218 PTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV 277

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS---------- 621
            W+ +I  Y +H    + L L  +M+        + P   T   +  AC+          
Sbjct: 278 CWSAMIGGYVLHDSISDALALYDDMLCIYG----LNPTPATLATMLRACAQLTDLKRGKK 333

Query: 622 -HSGMVSEGMDL 632
            H  M+  GMDL
Sbjct: 334 LHCHMIKSGMDL 345



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 6/138 (4%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  AR VFD +P  +V+ WN++I  Y   G  Q+ + L  +M+  G     V P   TF 
Sbjct: 57  IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-----VTPTNFTFP 111

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            L  ACS    +  G  L +      G+         ++ +  + G +  A  L N +  
Sbjct: 112 FLLKACSSLQALQLG-RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170

Query: 675 EFDKAGAWSSLLGACRIH 692
           +     AW++++ A   H
Sbjct: 171 QDRDIVAWNAMIAAFSFH 188


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/841 (35%), Positives = 482/841 (57%), Gaps = 33/841 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +   +++ +  EAIL + +M +S + P  + F +VL A   I+   LG+Q+H  +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 104 VKYGYGLSSVT-VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK+G  LSS T V N LV +Y + G ++    ++F ++  +D++S+NS+I+ L + G  D
Sbjct: 240 VKWG--LSSETFVCNALVTLYSRWG-NLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-N 221
            AL+ F  M    ++P   T+ S+  AC+++    G + G+Q+H   +++G  +  I+  
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGA--GYK-GKQLHSYVIKMGMSSDLIIEG 353

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ +Y K   ++ A   F + E  ++V WN ++ +  Q     E+     QM + G+ P
Sbjct: 354 SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP 413

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +  S+L  C+ L  LD G++IH   +++     N +V S L+DMY    E++  R +
Sbjct: 414 NQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF-NVYVCSVLIDMYAKHGELDTARGI 472

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
              + ++ +  W AMI GY Q++   EAL LF +ME   G+  +    SS + AC   +A
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN-QGIRSDNIGFSSAISACAGIQA 531

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH  +   G   D  + NAL+ +Y+R GR + +   F+ ++ +D +SWN +I+G
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISG 591

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G   +AL +  +M       N+  V          + N  T  + +      + + 
Sbjct: 592 FAQSGHCEEALQVFSQM-------NQAGV----------EANLFTFGSAVSATANTANIK 634

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +GK+IHA  I+    ++    + L+ +Y+KCG +  A+R F  MP +NV++WN +I  Y 
Sbjct: 635 QGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYS 694

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G E + L + M   G     + PN VTF+ + +ACSH G+V+EG+  F  M  ++G
Sbjct: 695 QHGYGSEAVSLFEEMKQLG-----LMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHG 749

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P P+HY CVVDLLGRA  +  A + I  MP E D A  W +LL AC +H+N+EIGE A
Sbjct: 750 LVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPD-AMIWRTLLSACTVHKNIEIGEFA 808

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A++L  LEP+ ++ YVLLSN+Y+ +  WD     R+ MK+ GV+KEPG SWIE  + IH 
Sbjct: 809 ARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHA 868

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD  H  +EQ++ ++++L+ER  + GYV D   +L++V +E+K+     HSEKLA+A
Sbjct: 869 FFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVA 928

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+L+      IRV KNLRVCNDCH   KF+SKI +R I++RD  RFHHF+ G CSC DY
Sbjct: 929 FGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDY 988

Query: 882 W 882
           W
Sbjct: 989 W 989



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 278/572 (48%), Gaps = 30/572 (5%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K++HA + K G+    V + + L+++Y   G ++ +  K+FD I   +   WN +I+ L
Sbjct: 29  AKKLHARIFKSGFDGEDV-LGSRLIDIYLAHG-EVDNAIKLFDDIPSSNVSFWNKVISGL 86

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
                    L  F +M+  NV P   T  SV  ACS    +   ++  Q+H   +  G  
Sbjct: 87  LAKKLASQVLGLFSLMITENVTPDESTFASVLRACSG--GKAPFQVTEQIHAKIIHHGFG 144

Query: 216 NT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++  + N L+ +Y+K G VD AK +F+    +D VSW  ++S LSQN +  EA++   QM
Sbjct: 145 SSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM 204

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
               + P     +SVL AC+ +E+   G+++H + ++   L   +FV +ALV +Y     
Sbjct: 205 HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG-LSSETFVCNALVTLYSRWGN 263

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +    ++F  +  +    +N++I+G  Q  + + AL LF KM ++  + P+  T++S++ 
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM-QLDCMKPDCVTVASLLS 322

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC    A    + +H + IK+G+  D  ++ +L+D+Y +   IE +   F   E  + V 
Sbjct: 323 ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVL 382

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN M+  Y   G   ++  +  +MQ                 +    PN  T  ++L  C
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQ-----------------IEGLMPNQYTYPSILRTC 425

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            +L AL  G++IH   I++    +V V S L+DMYAK G L+ AR +   +   +V++W 
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWT 485

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I  Y  H    E L+L + M  +G     ++ + + F +  +AC+    +++G  + +
Sbjct: 486 AMIAGYTQHDLFAEALKLFQEMENQG-----IRSDNIGFSSAISACAGIQALNQGQQI-H 539

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
                 G          +V L  R G+ +DAY
Sbjct: 540 AQSYISGYSEDLSIGNALVSLYARCGRAQDAY 571



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 29/300 (9%)

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           MEE  G+  N  T   +   C  S +  D + +H    K G   +  + + L+D+Y   G
Sbjct: 1   MEE-RGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHG 59

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++ +  +FDD+   +   WN +I+G          L L   M              + E
Sbjct: 60  EVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLM--------------ITE 105

Query: 496 TVLRPKPNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            V    P+  T  +VL  C G  +     ++IHA  I +   +  +V + L+D+Y+K G 
Sbjct: 106 NV---TPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGH 162

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           ++ A+ VF+ + +++ ++W  +I     +G   E + L   M         V P    F 
Sbjct: 163 VDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM-----HKSAVIPTPYVFS 217

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
           ++ +AC+   +   G  L +     +G+  S + + C  +V L  R G +  A Q+ + M
Sbjct: 218 SVLSACTKIELFKLGEQL-HGFIVKWGL--SSETFVCNALVTLYSRWGNLIAAEQIFSKM 274


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 295/704 (41%), Positives = 424/704 (60%), Gaps = 29/704 (4%)

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           SF  V V   C  L ++D L   +QVH   ++   E N  +MN L+ +Y + GR+ +A+ 
Sbjct: 28  SFMYVEVLKRC--LKQKD-LMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARC 84

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F +   +   SWN +++   ++    +A+   R+M   G++P+  +   +L AC+ L  
Sbjct: 85  VFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSA 144

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GKE+HA  +R+  L  +  VG+AL+ MY  C  +   RR+FD + +  I  W  MI 
Sbjct: 145 LKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIG 203

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y Q+   +EA  L ++ME+  G  PNA T  S++ AC    A    + +H HA+  GL 
Sbjct: 204 AYAQSGNGKEAYRLMLQMEQ-EGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  V  AL+ MY++ G I+ ++ +FD M+VRD VSWN MI  +   G+  +A  L  +M
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q                     KP++I  +++L  C +  AL   K+IH +A+ + L  D
Sbjct: 323 QTEG-----------------CKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V VG+ALV MY+K G ++ AR VFD M VRNV++WN +I     HG GQ+ LE+ + M A
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     VKP+ VTF+A+ +ACSH+G+V EG   +  M   YGIEP   H  C+VDLLGR
Sbjct: 426 HG-----VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGR 480

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG++ +A   I+ M  + D+A  W +LLG+CR + NVE+GE+ A+    L+P  A+ YVL
Sbjct: 481 AGRLMEAKLFIDNMAVDPDEA-TWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVL 539

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSNIY+ A  WD    VR  M+E G+RKEPG SWIE  ++IH FL  D SH + ++++  
Sbjct: 540 LSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINES 599

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
            + + E+++ EGY+PDT  VL N N ++KE  +C HSEKLAI +G+++TPPG  IRV KN
Sbjct: 600 KDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKN 659

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH ATK ISK+E REII+RD  RFHHFK+G CSCGDYW
Sbjct: 660 LRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 264/531 (49%), Gaps = 37/531 (6%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           +N   EAI+  +   +  +  D+F +  VLK     +DL   KQ+H  ++K      +  
Sbjct: 6   ANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRME-QNAH 64

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V N L+++Y +CG  + +   VFD + +K   SWN+MIA        + A+  FR M + 
Sbjct: 65  VMNNLLHVYIECGR-LQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHE 123

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGR 232
            V+P++ T + +  AC++LS    L+ G++VH   +R G  E +  +  AL+ MY K G 
Sbjct: 124 GVQPNAGTYMIILKACASLS---ALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGS 179

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +++A+ +F +  + D++SW  ++ + +Q+    EA   + QM   G KP+ ++  S+L A
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+    L   K +H +AL   + +D   VG+ALV MY     ++  R VFD +  + +  
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVR-VGTALVQMYAKSGSIDDARVVFDRMKVRDVVS 298

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN MI  + ++    EA  LF++M +  G  P+A    S++ AC  + A    + IH HA
Sbjct: 299 WNVMIGAFAEHGRGHEAYDLFLQM-QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           +  GL  D  V  AL+ MYS+ G I+ ++ +FD M+VR+ VSWN MI+G    G   DAL
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-----IH 527
            + R M                 T    KP+ +T + VL  C     + +G+        
Sbjct: 418 EVFRRM-----------------TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQ 460

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
            Y I      DV   + +VD+  + G L  A+   D M V  +  TW  ++
Sbjct: 461 VYGIE----PDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALL 507



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 220/422 (52%), Gaps = 16/422 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +          +A+  + EM    +QP+   +  +LKA A +  L  GK++HA  
Sbjct: 96  SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA-C 154

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +++G   S V V   L+ MYGKCGS + +  ++FD +   D +SW  MI    + G    
Sbjct: 155 IRHGGLESDVRVGTALLRMYGKCGS-INEARRIFDNLMNHDIISWTVMIGAYAQSGN--- 210

Query: 164 ALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
             EA+R+ML    E   P++ T VS+  AC++      L+  ++VH ++L  G E +  +
Sbjct: 211 GKEAYRLMLQMEQEGFKPNAITYVSILNACAS---EGALKWVKRVHRHALDAGLELDVRV 267

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             AL+ MYAK G +DDA+ +F   + RD+VSWN ++ + +++ +  EA     QM   G 
Sbjct: 268 GTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGC 327

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KPD +   S+L AC+    L+  K+IH +AL + + +D   VG+ALV MY     ++  R
Sbjct: 328 KPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR-VGTALVHMYSKSGSIDDAR 386

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD +  + +  WNAMI+G  Q+   ++AL +F +M    G+ P+  T  +V+ AC  +
Sbjct: 387 VVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM-TAHGVKPDRVTFVAVLSACSHA 445

Query: 400 EAFPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNT 457
               +    +    ++ G+  D    N ++D+  R GR+  +K   D+M V  D  +W  
Sbjct: 446 GLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGA 505

Query: 458 MI 459
           ++
Sbjct: 506 LL 507



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 27/326 (8%)

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N   E  ++L  +++   GL  ++     V+  C++ +     + +H   IK  + ++ +
Sbjct: 7   NTLSEAIVVLMNRLQR--GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAH 64

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V N L+ +Y   GR++ ++ +FD +  +   SWN MI GY       DA+ L REM +  
Sbjct: 65  VMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCH-- 122

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                       E V   +PN+ T M +L  C +LSAL  GKE+HA      L +DV VG
Sbjct: 123 ------------EGV---QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVG 167

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL+ MY KCG +N ARR+FD +   ++I+W V+I AY   G G+E   L+  M  EG  
Sbjct: 168 TALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEG-- 225

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
               KPN +T++++  AC+  G + + +   ++   D G+E        +V +  ++G +
Sbjct: 226 ---FKPNAITYVSILNACASEGAL-KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSI 281

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGA 688
           +DA  + + M  +     +W+ ++GA
Sbjct: 282 DDARVVFDRM--KVRDVVSWNVMIGA 305



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A   +  EA   +++M     +PD   F ++L A A    L   K+IH H 
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G  +  V V   LV+MY K GS + D   VFDR+  ++ VSWN+MI+ L + G    
Sbjct: 358 LDSGLEVD-VRVGTALVHMYSKSGS-IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQD 415

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG----RQVHGNSLRVGEWNTFI 219
           ALE FR M    V+P   T V+V  ACS+    D  R       QV+G    V       
Sbjct: 416 ALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSH----- 470

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
            N ++ +  + GR+ +AK    +   D D  +W  ++ S
Sbjct: 471 CNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGS 509


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/805 (36%), Positives = 465/805 (57%), Gaps = 32/805 (3%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           ++ +VL+  A  + L  GK++H+ ++  G  +     A  LV MY  CG D+    K+FD
Sbjct: 96  SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAK-LVFMYVNCG-DLVQGRKIFD 153

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           +I       WN +++   + G +  ++  F+ M    V  + +T   V    + L +   
Sbjct: 154 KIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK--- 210

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           ++  ++VHG  L++G   NT ++N+L+A Y K G V+ A  LF    + D+VSWN++++ 
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
              N      +    QM + G++ D  ++ SVL AC+++  L  G+ +H + ++     +
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVK-ACFSE 329

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
                + L+DMY  C  +     VF  + D  I  W ++I  Y +     +A+ LF +M+
Sbjct: 330 EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQ 389

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G+ P+  T++S+V AC  S +      +H + IK G+G +  V NAL++MY++ G +
Sbjct: 390 S-KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 448

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E ++ +F  + V+D VSWNTMI GY+      +AL L  +MQ                  
Sbjct: 449 EEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK----------------- 491

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
            + KP+ IT+  VLP C  L+AL KG+EIH + +R    +D+ V  ALVDMYAKCG L  
Sbjct: 492 -QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVL 550

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A+ +FD++P +++I+W V+I  YGMHG G E +     M   G     ++P+E +F A+ 
Sbjct: 551 AQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-----IEPDESSFSAIL 605

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            ACSHSG+++EG   F  M+++ G+EP  +HYACVVDLL R G +  AY+ I  MP + D
Sbjct: 606 NACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPD 665

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W  LL  CRIH +V++ E  A+++F LEPD   +YV+L+N+Y+ A+ W++   +RK
Sbjct: 666 TT-IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 724

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
           +M++ G ++ PGCSWIE G + + F+AG+  H Q++++   L  L+ +M+ E Y      
Sbjct: 725 RMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRY 784

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VL N ++ EKE + CGHSEK A+AFGILN PPG T+RV+KN RVC DCH+  KF+SK   
Sbjct: 785 VLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTK 844

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
            EI+LRD  RFHHFK+G CSC D +
Sbjct: 845 MEIVLRDSNRFHHFKDGLCSCRDAF 869



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 174/584 (29%), Positives = 292/584 (50%), Gaps = 47/584 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+   FRE++  + +M +  +  + + F  VLK  A +  +   K++H +V+
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S+  V N+L+  Y K G  +   + +FD ++E D VSWNSMI      G     
Sbjct: 223 KLGFG-SNTAVVNSLIAAYFKFGG-VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNG 280

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NAL 223
           LE F  ML   VE    TLVSV +AC+N+     L LGR +HG  ++       +  N L
Sbjct: 281 LEIFIQMLILGVEVDLTTLVSVLVACANIGN---LSLGRALHGFGVKACFSEEVVFSNTL 337

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G ++ A  +F    D  +VSW +I+++  +   + +A+    +M  +G++PD 
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDI 397

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ S++ AC+    LD G+++H+Y ++N  +  N  V +AL++MY  C  VE  R VF 
Sbjct: 398 YTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFS 456

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I  K I  WN MI GY QN    EAL LF+ M++     P+  TM+ V+PAC    A  
Sbjct: 457 KIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALD 514

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHGH ++ G   D +V  AL+DMY++ G + +++ +FD +  +D +SW  MI GY 
Sbjct: 515 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 574

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G   +A+    EM+                 +   +P+  +   +L  C     L +G
Sbjct: 575 MHGFGNEAISTFNEMR-----------------IAGIEPDESSFSAILNACSHSGLLNEG 617

Query: 524 KEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
            +    ++RN    +  +   + +VD+ A+ G L+ A +  + MP++ +   W V++   
Sbjct: 618 WKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 676

Query: 581 GMHGE-------GQEVLEL----------LKNMVAEGSRGGEVK 607
            +H +        + + EL          L N+ AE  +  EVK
Sbjct: 677 RIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVK 720



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 142/260 (54%), Gaps = 7/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  R   + +AI  + EM    ++PD +   +++ A A    L  G+ +H++V
Sbjct: 364 SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 423

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G G S++ V N L+NMY KCGS + +   VF +I  KD VSWN+MI    +    + 
Sbjct: 424 IKNGMG-SNLPVTNALINMYAKCGS-VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNE 481

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           ALE F + +    +P   T+  V  AC+ L+  D    GR++HG+ LR G ++   +  A
Sbjct: 482 ALELF-LDMQKQFKPDDITMACVLPACAGLAALDK---GREIHGHILRRGYFSDLHVACA 537

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +  A+ LF     +DL+SW  +++    +    EA+    +M + GI+PD
Sbjct: 538 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPD 597

Query: 283 GVSIASVLPACSHLEMLDTG 302
             S +++L ACSH  +L+ G
Sbjct: 598 ESSFSAILNACSHSGLLNEG 617


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 289/740 (39%), Positives = 433/740 (58%), Gaps = 29/740 (3%)

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           D ++ +  ++ LC+ G+   AL     M+       S     +   C+ L     L  GR
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLR---SLEQGR 116

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           +VH   L+ G + N ++ N L++MYAK G + DA+ +F    DR++VSW  ++ +    +
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGN 176

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           + LEA      M L G KPD V+  S+L A ++ E+L  G+++H    +  + ++   VG
Sbjct: 177 QNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPR-VG 235

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           ++LV MY  C ++   + +FD + +K +  W  +I GY Q    + AL L  KM++ A +
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ-AEV 294

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T +S++  C    A    + +H + I+ G GR+ +V NAL+ MY + G ++ ++ 
Sbjct: 295 APNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARK 354

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F D+  RD V+W  M+TGY   G H +A+ L R MQ                     KP
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG-----------------IKP 397

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           + +T  + L  C + + L +GK IH   +    + DV + SALV MYAKCG ++ AR VF
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVF 457

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           + M  RNV+ W  +I     HG  +E LE  + M  +G     +KP++VTF ++ +AC+H
Sbjct: 458 NQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG-----IKPDKVTFTSVLSACTH 512

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            G+V EG   F  M  DYGI+P  +HY+C VDLLGRAG +E+A  +I  MP +      W
Sbjct: 513 VGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQ-PGPSVW 571

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            +LL ACRIH +VE GE AA+N+  L+PD    YV LSNIY++A  ++ A  VR+ M++ 
Sbjct: 572 GALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKR 631

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
            V KEPG SWIE   ++H F   D SH ++++++  L  L+E+++++GYVPDT  VLH+V
Sbjct: 632 DVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDV 691

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           +EE+K   LC HSE+LAI +G++ TPPGT IR+ KNLRVC DCH A+KFISK+  REII 
Sbjct: 692 DEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIA 751

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFHHF +G CSCGD+W
Sbjct: 752 RDAHRFHHFVDGVCSCGDFW 771



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 261/513 (50%), Gaps = 35/513 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  +L+  A ++ L  G+++HA ++K G   +   + NTL++MY KCGS + D  +VFD 
Sbjct: 99  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRY-LENTLLSMYAKCGS-LTDARRVFDG 156

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I +++ VSW +MI       +   A + +  M  +  +P   T VS+  A +N    + L
Sbjct: 157 IRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN---PELL 213

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           ++G++VH    + G E    +  +L+ MYAK G +  A+ +F    ++++V+W  +++  
Sbjct: 214 QVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGY 273

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q  +   A+  L +M    + P+ ++  S+L  C+    L+ GK++H Y +++    + 
Sbjct: 274 AQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE- 332

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            +V +AL+ MYC C  ++  R++F  +  + +  W AM+TGY Q  + +EA+ LF +M++
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ P+  T +S + +C       + + IH   +  G   D Y+Q+AL+ MY++ G ++
Sbjct: 393 -QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMD 451

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++ +F+ M  R+ V+W  MITG   C QHG     L   + M+++              
Sbjct: 452 DARLVFNQMSERNVVAWTAMITG---CAQHGRCREALEYFEQMKKQG------------- 495

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHA-----YAIRNMLATDVVVGSALVDMYAKCG 553
             KP+ +T  +VL  C  +  + +G++        Y I+ M+       S  VD+  + G
Sbjct: 496 -IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY----SCFVDLLGRAG 550

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            L  A  V   MP +     W  ++ A  +H +
Sbjct: 551 HLEEAENVILTMPFQPGPSVWGALLSACRIHSD 583



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 220/453 (48%), Gaps = 33/453 (7%)

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           F   D ++ +  VS L +  +  EA+  L  M L+G +        +L  C+ L  L+ G
Sbjct: 56  FRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQG 115

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           +E+HA  L++ I   N ++ + L+ MY  C  +   RRVFD I D+ I  W AMI  +  
Sbjct: 116 REVHAAILKSGIQ-PNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
              + EA   +  M ++AG  P+  T  S++ A    E     + +H    K GL  +  
Sbjct: 175 GNQNLEAYKCYETM-KLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPR 233

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V  +L+ MY++ G I  ++ IFD +  ++ V+W  +I GY   GQ   AL LL +MQ  E
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                              PN IT  ++L GC    AL  GK++H Y I++    ++ V 
Sbjct: 294 -----------------VAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL+ MY KCG L  AR++F  +P R+V+TW  ++  Y   G   E ++L + M  +G  
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG-- 394

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM-KDDYGIEPSPDHY--ACVVDLLGRA 659
              +KP+++TF +   +CS    + EG  +  ++    Y +    D Y  + +V +  + 
Sbjct: 395 ---IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL----DVYLQSALVSMYAKC 447

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           G ++DA  + N M        AW++++  C  H
Sbjct: 448 GSMDDARLVFNQMSER--NVVAWTAMITGCAQH 478



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 15/450 (3%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   SW   + +    NQ  EA   Y  M  +  +PD   F ++L A    + L +
Sbjct: 156 GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQV 215

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+++H  + K G  L    V  +LV MY KCG D+     +FD++ EK+ V+W  +IA  
Sbjct: 216 GQKVHMEIAKAGLELEP-RVGTSLVGMYAKCG-DISKAQVIFDKLPEKNVVTWTLLIAGY 273

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G+ D+ALE    M  + V P+  T  S+   C+       L  G++VH   ++ G  
Sbjct: 274 AQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPL---ALEHGKKVHRYIIQSGYG 330

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
              +++NAL+ MY K G + +A+ LF     RD+V+W  +V+  +Q     EA+   R+M
Sbjct: 331 REIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             +GIKPD ++  S L +CS    L  GK IH   +     +D  ++ SALV MY  C  
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD-VYLQSALVSMYAKCGS 449

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++  R VF+ +S++ +  W AMITG  Q+    EAL  F +M++  G+ P+  T +SV+ 
Sbjct: 450 MDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK-QGIKPDKVTFTSVLS 508

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDT 452
           AC       ++   H  ++ L  G    V++    +D+  R G +E ++ +   M  +  
Sbjct: 509 ACTHV-GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPG 567

Query: 453 VS-WNTMITGYTICGQHGDALMLLREMQNM 481
            S W  +++    C  H D     R  +N+
Sbjct: 568 PSVWGALLSA---CRIHSDVERGERAAENV 594


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 312/802 (38%), Positives = 462/802 (57%), Gaps = 32/802 (3%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+A    + L+  K+IH H +K      S +V + L  +Y  C   +    ++FD I  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADS-SVLHKLTRLYLSCNQVVL-ARRLFDEIPN 71

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
              + WN +I      G +D A++ +  ML+  V P+ +T   V  ACS L     +  G
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLL---AIEDG 128

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            ++H ++   G E + F+  AL+  YAK G + +A+ LF S   RD+V+WN +++  S  
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
               +AV  + QM   GI P+  +I  VLP     + L  GK +H Y +R     DN  V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF--DNGVV 246

Query: 322 -GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
            G+ L+DMY  C+ +   R++FD +  +    W+AMI GY  ++  +EAL LF +M    
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKD 306

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + P   T+ SV+ AC +         +H + IKLG   D  + N L+ MY++ G I+ +
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
              FD+M  +D+VS++ +++G   C Q+G+A + L   + M+       +  +D      
Sbjct: 367 IRFFDEMNPKDSVSFSAIVSG---CVQNGNAAVALSIFRMMQ-------LSGID------ 410

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P+  T++ VLP C  L+AL  G   H Y I    ATD ++ +AL+DMY+KCG ++FAR 
Sbjct: 411 -PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFARE 469

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ M   ++++WN +I+ YG+HG G E L L  +++A G     +KP+++TFI L ++C
Sbjct: 470 VFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-----LKPDDITFICLLSSC 524

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           SHSG+V EG   F  M  D+ I P  +H  C+VD+LGRAG +++A+  I  MP E D   
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD-VR 583

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            WS+LL ACRIH+N+E+GE  ++ +  L P+   ++VLLSNIYS+A  WD A  +R   K
Sbjct: 584 IWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 643

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           + G++K PGCSWIE    +H F+ GD SH Q  Q++  LE L   M++ GY  + S V  
Sbjct: 644 DWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQ 703

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V EEEKE +L  HSEKLAIAFGILN   G  I V KNLRVC DCH A KF++ I  REI
Sbjct: 704 DVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREI 763

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
            +RD  RFHHFKNGTC+CGD+W
Sbjct: 764 TVRDANRFHHFKNGTCNCGDFW 785



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 280/564 (49%), Gaps = 31/564 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W + +R+ A +  F  AI  Y  M    ++P+ + +P VLKA +G+  +  G +IH+H  
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            +G   S V V   LV+ Y KCG  + +  ++F  ++ +D V+WN+MIA    +G  D A
Sbjct: 137 MFGLE-SDVFVCTALVDFYAKCGI-LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NAL 223
           ++    M    + P+S T+V V      +     L  G+ +HG  +R    N  ++   L
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVL---PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPD 282
           + MYAK   +  A+ +F     R+ VSW+ ++     +D   EA+    QM L+  + P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++ SVL AC+ L  L  G+++H Y ++   ++D   +G+ L+ MY  C  ++   R F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLD-ILLGNTLLSMYAKCGVIDDAIRFF 370

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D ++ K    ++A+++G  QN     AL +F +M +++G+ P+ TTM  V+PAC    A 
Sbjct: 371 DEMNPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 HG+ I  G   D  + NAL+DMYS+ G+I  ++ +F+ M+  D VSWN MI GY
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            I G   +AL L  ++                   L  KP+ IT + +L  C     + +
Sbjct: 490 GIHGLGMEALGLFHDL-----------------LALGLKPDDITFICLLSSCSHSGLVME 532

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G+       R+  +   +     +VD+  + G ++ A      MP   +V  W+ ++ A 
Sbjct: 533 GRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 592

Query: 581 GMHGE---GQEVLELLKNMVAEGS 601
            +H     G+EV + ++++  E +
Sbjct: 593 RIHKNIELGEEVSKKIQSLGPEST 616


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/849 (35%), Positives = 478/849 (56%), Gaps = 33/849 (3%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G + +   SW+  +   +++    EAI  + +M    I P  +AF +VL A   I+ L +
Sbjct: 207  GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 266

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            G+Q+H  V+K G+  S   V N LV++Y   G ++     +F  ++++D V++N++I  L
Sbjct: 267  GEQLHGLVLKLGFS-SDTYVCNALVSLYFHLG-NLISAEHIFSNMSQRDAVTYNTLINGL 324

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG-LRLGRQVHGNSLRVG- 213
             + G  + A+E F+ M    +EP S TL S+ +ACS     DG L  G+Q+H  + ++G 
Sbjct: 325  SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS----ADGTLFRGQQLHAYTTKLGF 380

Query: 214  EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
              N  I  AL+ +YAK   ++ A   F   E  ++V WN ++ +    D    +    RQ
Sbjct: 381  ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 440

Query: 274  MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            M +  I P+  +  S+L  C  L  L+ G++IH+  ++ +  + N++V S L+DMY    
Sbjct: 441  MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLG 499

Query: 334  EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +++    +    + K +  W  MI GY Q  +D++AL  F +M +  G+  +   +++ V
Sbjct: 500  KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAV 558

Query: 394  PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
             AC   +A  + + IH  A   G   D   QNAL+ +YSR G+IE S   F+  E  D +
Sbjct: 559  SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 618

Query: 454  SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
            +WN +++G+   G + +AL +   M       NR  +            N+ T  + +  
Sbjct: 619  AWNALVSGFQQSGNNEEALRVFVRM-------NREGI----------DNNNFTFGSAVKA 661

Query: 514  CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
                + + +GK++HA   +    ++  V +AL+ MYAKCG ++ A + F  +  +N ++W
Sbjct: 662  ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 721

Query: 574  NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
            N II AY  HG G E L+    M+        V+PN VT + + +ACSH G+V +G+  F
Sbjct: 722  NAIINAYSKHGFGSEALDSFDQMIHSN-----VRPNHVTLVGVLSACSHIGLVDKGIAYF 776

Query: 634  YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
              M  +YG+ P P+HY CVVD+L RAG +  A + I  MP + D A  W +LL AC +H+
Sbjct: 777  ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD-ALVWRTLLSACVVHK 835

Query: 694  NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
            N+EIGE AA +L  LEP+ ++ YVLLSN+Y+ ++ WD     R+KMKE GV+KEPG SWI
Sbjct: 836  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895

Query: 754  EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
            E  + IH F  GD +H  ++++H + ++L++R  + GYV D   +L+ +  E+K+ ++  
Sbjct: 896  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 955

Query: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
            HSEKLAI+FG+L+ P    I V KNLRVCNDCH   KF+SK+ +REII+RD  RFHHF+ 
Sbjct: 956  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1015

Query: 874  GTCSCGDYW 882
            G CSC DYW
Sbjct: 1016 GACSCKDYW 1024



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/608 (27%), Positives = 287/608 (47%), Gaps = 38/608 (6%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  G+++H+ ++K G   S+  ++  L + Y   G D++  +KVFD + E+   +WN MI
Sbjct: 61  LDEGRKLHSQILKLGLD-SNGCLSEKLFDFYLFKG-DLYGAFKVFDEMPERTIFTWNKMI 118

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
             L            F  M+  NV P+  T   V  AC   S      +  Q+H   L  
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV--AFDVVEQIHARILYQ 176

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   +T + N L+ +Y++ G VD A+ +F     +D  SW  ++S LS+N+   EA+   
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
             M + GI P   + +SVL AC  +E L+ G+++H   L+     D ++V +ALV +Y +
Sbjct: 237 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFH 295

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              +     +F  +S +    +N +I G  Q  Y E+A+ LF +M  + GL P++ T++S
Sbjct: 296 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLAS 354

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           +V AC         + +H +  KLG   +  ++ AL+++Y++   IE +   F + EV +
Sbjct: 355 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 414

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN M+  Y +     ++  + R+MQ             ++E V    PN  T  ++L
Sbjct: 415 VVLWNVMLVAYGLLDDLRNSFRIFRQMQ-------------IEEIV----PNQYTYPSIL 457

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L  L  G++IH+  I+     +  V S L+DMYAK G L+ A  +      ++V+
Sbjct: 458 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 517

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +I  Y  +    + L   + M+  G     ++ +EV      +AC+    + EG  
Sbjct: 518 SWTTMIAGYTQYNFDDKALTTFRQMLDRG-----IRSDEVGLTNAVSACAGLQALKEGQQ 572

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG---AWSSLLGA 688
           + +      G          +V L  R GK+E++Y     +  E  +AG   AW++L+  
Sbjct: 573 I-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAWNALVSG 626

Query: 689 CRIHQNVE 696
            +   N E
Sbjct: 627 FQQSGNNE 634



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 144/353 (40%), Gaps = 86/353 (24%)

Query: 501 KPNSITLMTVLPGCGALS-ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           +PN  TL  +L GC   + +L +G+++H+  ++  L ++  +   L D Y   G L  A 
Sbjct: 41  RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +VFD MP R + TWN +I          EV  L   MV+E      V PNE TF  +  A
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-----VTPNEGTFSGVLEA 155

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN--------- 670
           C    +  + ++  +      G+  S      ++DL  R G V+ A ++ +         
Sbjct: 156 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215

Query: 671 ----------------------------MMPPEFDKAGAWSSLLGACRIHQNVEIGE--- 699
                                       +MP  +    A+SS+L AC+  +++EIGE   
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY----AFSSVLSACKKIESLEIGEQLH 271

Query: 700 ----------------------------IAAQNLF--LLEPDVASHYVLLSNIYSSAQLW 729
                                       I+A+++F  + + D  ++  L++ + S     
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL-SQCGYG 330

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +KAM++ K+M   G+  EP  + +     +    + DG+  + +QLH +   L
Sbjct: 331 EKAMELFKRMHLDGL--EPDSNTLA---SLVVACSADGTLFRGQQLHAYTTKL 378


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/849 (35%), Positives = 479/849 (56%), Gaps = 33/849 (3%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G + +   SW+  +   +++    EAI  + +M    I P  +AF +VL A   I+ L +
Sbjct: 247  GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            G+Q+H  V+K G+  S   V N LV++Y   G ++     +F  ++++D V++N++I  L
Sbjct: 307  GEQLHGLVLKLGFS-SDTYVCNALVSLYFHLG-NLISAEHIFSNMSQRDAVTYNTLINGL 364

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG-LRLGRQVHGNSLRVG- 213
             + G  + A+E F+ M    +EP S TL S+ +ACS     DG L  G+Q+H  + ++G 
Sbjct: 365  SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS----ADGTLFRGQQLHAYTTKLGF 420

Query: 214  EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
              N  I  AL+ +YAK   ++ A   F   E  ++V WN ++ +    D    +    RQ
Sbjct: 421  ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480

Query: 274  MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            M +  I P+  +  S+L  C  L  L+ G++IH+  ++ +  + N++V S L+DMY    
Sbjct: 481  MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLG 539

Query: 334  EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +++    +    + K +  W  MI GY Q  +D++AL  F +M +  G+  +   +++ V
Sbjct: 540  KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAV 598

Query: 394  PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
             AC   +A  + + IH  A   G   D   QNAL+ +YSR G+IE S   F+  E  D +
Sbjct: 599  SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658

Query: 454  SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
            +WN +++G+   G + +AL +   M       NR  + +          N+ T  + +  
Sbjct: 659  AWNALVSGFQQSGNNEEALRVFVRM-------NREGIDN----------NNFTFGSAVKA 701

Query: 514  CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
                + + +GK++HA   +    ++  V +AL+ MYAKCG ++ A + F  +  +N ++W
Sbjct: 702  ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761

Query: 574  NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
            N II AY  HG G E L+    M+        V+PN VT + + +ACSH G+V +G+  F
Sbjct: 762  NAIINAYSKHGFGSEALDSFDQMIH-----SNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816

Query: 634  YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
              M  +YG+ P P+HY CVVD+L RAG +  A + I  MP + D A  W +LL AC +H+
Sbjct: 817  ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD-ALVWRTLLSACVVHK 875

Query: 694  NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
            N+EIGE AA +L  LEP+ ++ YVLLSN+Y+ ++ WD     R+KMKE GV+KEPG SWI
Sbjct: 876  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935

Query: 754  EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
            E  + IH F  GD +H  ++++H + ++L++R  + GYV D   +L+ +  E+K+ ++  
Sbjct: 936  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995

Query: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
            HSEKLAI+FG+L+ P    I V KNLRVCNDCH   KF+SK+ +REII+RD  RFHHF+ 
Sbjct: 996  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055

Query: 874  GTCSCGDYW 882
            G CSC DYW
Sbjct: 1056 GACSCKDYW 1064



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 179/674 (26%), Positives = 310/674 (45%), Gaps = 43/674 (6%)

Query: 28  TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV 87
           T T  P      R   + I    SE  S  F+E  +  +E     I+P++     +L+  
Sbjct: 39  TRTVFPTLCGTRRASFAAISVYISEDES--FQEKRIDSVE--NRGIRPNHQTLKWLLEGC 94

Query: 88  AGIQ-DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
                 L  G+++H+ ++K G   S+  ++  L + Y   G D++  +KVFD + E+   
Sbjct: 95  LKTNGSLDEGRKLHSQILKLGLD-SNGCLSEKLFDFYLFKG-DLYGAFKVFDEMPERTIF 152

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           +WN MI  L            F  M+  NV P+  T   V  AC   S      +  Q+H
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV--AFDVVEQIH 210

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              L  G   +T + N L+ +Y++ G VD A+ +F     +D  SW  ++S LS+N+   
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+     M + GI P   + +SVL AC  +E L+ G+++H   L+     D ++V +AL
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNAL 329

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           V +Y +   +     +F  +S +    +N +I G  Q  Y E+A+ LF +M  + GL P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPD 388

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           + T++S+V AC         + +H +  KLG   +  ++ AL+++Y++   IE +   F 
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           + EV + V WN M+  Y +     ++  + R+MQ             ++E V    PN  
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-------------IEEIV----PNQY 491

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  ++L  C  L  L  G++IH+  I+     +  V S L+DMYAK G L+ A  +    
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             ++V++W  +I  Y  +    + L   + M+  G     ++ +EV      +AC+    
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-----IRSDEVGLTNAVSACAGLQA 606

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG---AW 682
           + EG  + +      G          +V L  R GK+E++Y     +  E  +AG   AW
Sbjct: 607 LKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAW 660

Query: 683 SSLLGACRIHQNVE 696
           ++L+   +   N E
Sbjct: 661 NALVSGFQQSGNNE 674


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 295/803 (36%), Positives = 462/803 (57%), Gaps = 32/803 (3%)

Query: 79   AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
            ++ +VL+  A  + L  GK++H+ ++  G  +     A  LV MY  CG D+    K+FD
Sbjct: 371  SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAK-LVFMYVNCG-DLVQGRKIFD 428

Query: 139  RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            +I       WN +++   + G +  ++  F+ M    V  + +T   V    + L +   
Sbjct: 429  KIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK--- 485

Query: 199  LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            ++  ++VHG  L++G   NT ++N+L+A Y K G V+ A  LF    + D+VSWN++++ 
Sbjct: 486  VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545

Query: 258  LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
               N      +    QM + G++ D  ++ SVL A +++  L  G+ +H + ++     +
Sbjct: 546  CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKA-CFSE 604

Query: 318  NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
                 + L+DMY  C  +     VF  + D  I  W + I  Y +     +A+ LF +M+
Sbjct: 605  EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQ 664

Query: 378  EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
               G+ P+  T++S+V AC  S +      +H + IK G+G +  V NAL++MY++ G +
Sbjct: 665  S-KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 723

Query: 438  EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            E ++ +F  + V+D VSWNTMI GY+      +AL L  +MQ                  
Sbjct: 724  EEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK----------------- 766

Query: 498  LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
             + KP+ IT+  VLP C  L+AL KG+EIH + +R    +D+ V  ALVDMYAKCG L  
Sbjct: 767  -QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVL 825

Query: 558  ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
            A+ +FD++P +++I+W V+I  YGMHG G E +     M   G     ++P+E +F  + 
Sbjct: 826  AQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-----IEPDESSFSVIL 880

Query: 618  AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
             ACSHSG+++EG   F  M+++ G+EP  +HYACVVDLL R G +  AY+ I  MP + D
Sbjct: 881  NACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPD 940

Query: 678  KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
                W  LL  CRIH +V++ E  A+++F LEPD   +YV+L+N+Y+ A+ W++   +RK
Sbjct: 941  TT-IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 999

Query: 738  KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            +M++ G ++ PGCSWIE G + + F+AG+  H Q++++   L  L+ +M+ E Y      
Sbjct: 1000 RMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRY 1059

Query: 798  VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
            VL N ++ EKE + CGHSEK A+AFGILN PPG T+RV+KN RVC DCH+  KF+SK   
Sbjct: 1060 VLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTK 1119

Query: 858  REIILRDVRRFHHFKNGTCSCGD 880
            REI+LRD  RFHHFK+G CSC D
Sbjct: 1120 REIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 172/584 (29%), Positives = 290/584 (49%), Gaps = 47/584 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+   FRE++  + +M +  +  + + F  VLK  A +  +   K++H +V+
Sbjct: 438 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S+  V N+L+  Y K G  +   + +FD ++E D VSWNSMI      G     
Sbjct: 498 KLGFG-SNTAVVNSLIAAYFKFGG-VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNG 555

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NAL 223
           LE F  ML   VE    TLVSV +A +N+     L LGR +HG  ++       +  N L
Sbjct: 556 LEIFIQMLILGVEVDLTTLVSVLVAWANIGN---LSLGRALHGFGVKACFSEEVVFSNTL 612

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G ++ A  +F    D  +VSW + +++  +   + +A+    +M  +G++PD 
Sbjct: 613 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDI 672

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ S++ AC+    LD G+++H+Y ++N  +  N  V +AL++MY  C  VE  R VF 
Sbjct: 673 YTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFS 731

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I  K I  WN MI GY QN    EAL LF+ M++     P+  TM+ V+PAC    A  
Sbjct: 732 KIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALD 789

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHGH ++ G   D +V  AL+DMY++ G + +++ +FD +  +D +SW  MI GY 
Sbjct: 790 KGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG 849

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G   +A+    EM+                 +   +P+  +   +L  C     L +G
Sbjct: 850 MHGFGNEAISTFNEMR-----------------IAGIEPDESSFSVILNACSHSGLLNEG 892

Query: 524 KEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
            +    ++RN    +  +   + +VD+ A+ G L+ A +  + MP++ +   W V++   
Sbjct: 893 WKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 951

Query: 581 GMHGE-------GQEVLEL----------LKNMVAEGSRGGEVK 607
            +H +        + + EL          L N+ AE  +  EVK
Sbjct: 952 RIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVK 995



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 167/322 (51%), Gaps = 16/322 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW  ++ +  R   + +AI  + EM    ++PD +   +++ A A    L  G+ +H++V
Sbjct: 639 SWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 698

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G G S++ V N L+NMY KCGS + +   VF +I  KD VSWN+MI    +    + 
Sbjct: 699 IKNGMG-SNLPVTNALINMYAKCGS-VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNE 756

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           ALE F + +    +P   T+  V  AC+ L+  D    GR++HG+ LR G ++   +  A
Sbjct: 757 ALELF-LDMQKQFKPDDITMACVLPACAGLAALDK---GREIHGHILRRGYFSDLHVACA 812

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +  A+ LF     +DL+SW  +++    +    EA+    +M + GI+PD
Sbjct: 813 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPD 872

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRV 341
             S + +L ACSH  +L+ G +    ++RN+  ++      A +VD+      +    + 
Sbjct: 873 ESSFSVILNACSHSGLLNEGWKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLS---KA 928

Query: 342 FDFISDKKI----ALWNAMITG 359
           + FI    I     +W  +++G
Sbjct: 929 YKFIESMPIKPDTTIWGVLLSG 950


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 315/852 (36%), Positives = 488/852 (57%), Gaps = 38/852 (4%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P   T  KE   + L S +R  Q +EA+  ++ +  S +QPD      V    AG  D 
Sbjct: 51  IPHRPTTLKEH-NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDG 109

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
            LG+Q+H   VK+G  +  V+V  +LV+MY K   ++ D  +VFD + E++ VSW S++A
Sbjct: 110 KLGRQVHCQCVKFGL-VDHVSVGTSLVDMYMKT-ENVNDGRRVFDEMGERNVVSWTSLLA 167

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
                G +    E F  M Y  V P+ +T+ +V  A  N      + +G QVH   ++ G
Sbjct: 168 GYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVN---EGVVGIGLQVHAMVVKHG 224

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            E    + N+L+++Y++LG + DA+ +F   E RD V+WN++++   +N + LE      
Sbjct: 225 FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFN 284

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L G+KP  ++ ASV+ +C+ L  L   K +   AL++    D   V +AL+     C
Sbjct: 285 KMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQ-IVITALMVALSKC 343

Query: 333 REVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           +E++    +F  + + K +  W AMI+G  QN  +++A+ LF +M    G+ PN  T S+
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRR-EGVKPNHFTYSA 402

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++   V    F  +  +H   IK    R   V  AL+D Y ++G    +  +F+ +E +D
Sbjct: 403 IL--TVHYPVFVSE--MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W+ M+ GY   G+  +A  L  ++              + E +   KPN  T  +V+
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQL--------------IKEGI---KPNEFTFSSVI 501

Query: 512 PGCGALSALA-KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
             C + +A A +GK+ HAYAI+  L   + V SALV MYAK G ++ A  VF     R++
Sbjct: 502 NACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDL 561

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++WN +I  Y  HG+ ++ LE+   M     R  +V  + VTFI +  AC+H+G+V +G 
Sbjct: 562 VSWNSMISGYSQHGQAKKALEVFDEM---QKRNMDV--DAVTFIGVITACTHAGLVEKGQ 616

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             F  M +D+ I P+  HY+C++DL  RAG +E A  +IN MP     A  W +LLGA R
Sbjct: 617 KYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFP-PGATVWRTLLGAAR 675

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H+NVE+GE+AA+ L  L+P+ ++ YVLLSN+Y++A  W +  +VRK M +  V+KEPG 
Sbjct: 676 VHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGY 735

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SWIE  ++ + FLAGD +H  S Q++  L  LS R++  GY PDT  V H++ +E+KET+
Sbjct: 736 SWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETI 795

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSE+LAIAFG++ TPP   I++ KNLRVC DCH  TK +S +E R I++RD  RFHH
Sbjct: 796 LSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHH 855

Query: 871 FKNGTCSCGDYW 882
           FK+G CSCGDYW
Sbjct: 856 FKDGLCSCGDYW 867


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 312/802 (38%), Positives = 461/802 (57%), Gaps = 32/802 (3%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+A    + L+  K+IH H +K      S +V + L  +Y  C   +    ++FD I  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADS-SVLHKLTRLYLSCNQVVL-ARRLFDEIPN 71

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
              + WN +I      G +D A++ +  ML+  V P+ +T   V  ACS L     +  G
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLL---AIEDG 128

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            ++H ++   G E + F+  AL+  YAK G + +A+ LF S   RD+V+WN +++  S  
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
               +AV  + QM   GI P+  +I  VLP     + L  GK +H Y +R     DN  V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF--DNGVV 246

Query: 322 -GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
            G+ L+DMY  C+ +   R++FD +  +    W+AMI GY  ++  +EAL LF +M    
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + P   T+ SV+ AC +         +H + IKLG   D  + N L+ MY++ G I+ +
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
              FD M  +D+VS++ +++G   C Q+G+A + L   + M+       +  +D      
Sbjct: 367 IRFFDXMNPKDSVSFSAIVSG---CVQNGNAAVALSIFRMMQ-------LSGID------ 410

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P+  T++ VLP C  L+AL  G   H Y I    ATD ++ +AL+DMY+KCG ++FAR 
Sbjct: 411 -PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFARE 469

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ M   ++++WN +I+ YG+HG G E L L  +++A G     +KP+++TFI L ++C
Sbjct: 470 VFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-----LKPDDITFICLLSSC 524

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           SHSG+V EG   F  M  D+ I P  +H  C+VD+LGRAG +++A+  I  MP E D   
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPD-VR 583

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            WS+LL ACRIH+N+E+GE  ++ +  L P+   ++VLLSNIYS+A  WD A  +R   K
Sbjct: 584 IWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 643

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           + G++K PGCSWIE    +H F+ GD SH Q  Q++  LE L   M++ GY  + S V  
Sbjct: 644 DWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQ 703

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V EEEKE +L  HSEKLAIAFGILN   G  I V KNLRVC DCH A KF++ I  REI
Sbjct: 704 DVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREI 763

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
            +RD  RFHHFKNGTC+CGD+W
Sbjct: 764 TVRDANRFHHFKNGTCNCGDFW 785



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 280/564 (49%), Gaps = 31/564 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W + +R+ A +  F  AI  Y  M    ++P+ + +P VLKA +G+  +  G +IH+H  
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            +G   S V V   LV+ Y KCG  + +  ++F  ++ +D V+WN+MIA    +G  D A
Sbjct: 137 MFGLE-SDVFVCTALVDFYAKCGI-LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NAL 223
           ++    M    + P+S T+V V      +     L  G+ +HG  +R    N  ++   L
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVL---PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPD 282
           + MYAK   +  A+ +F     R+ VSW+ ++     +D   EA+    QM L+  + P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++ SVL AC+ L  L  G+++H Y ++   ++D   +G+ L+ MY  C  ++   R F
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLD-ILLGNTLLSMYAKCGVIDDAIRFF 370

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D ++ K    ++A+++G  QN     AL +F +M +++G+ P+ TTM  V+PAC    A 
Sbjct: 371 DXMNPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 HG+ I  G   D  + NAL+DMYS+ G+I  ++ +F+ M+  D VSWN MI GY
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            I G   +AL L  ++                   L  KP+ IT + +L  C     + +
Sbjct: 490 GIHGLGMEALGLFHDL-----------------LALGLKPDDITFICLLSSCSHSGLVME 532

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G+       R+  +   +     +VD+  + G ++ A      MP   +V  W+ ++ A 
Sbjct: 533 GRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 592

Query: 581 GMHGE---GQEVLELLKNMVAEGS 601
            +H     G+EV + ++++  E +
Sbjct: 593 RIHKNIELGEEVSKKIQSLGPEST 616


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 304/848 (35%), Positives = 472/848 (55%), Gaps = 31/848 (3%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G Q R   SW+  L   ++S    EA+L + +M  S + P  + F +VL A   ++   +
Sbjct: 230  GLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKV 289

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            G+Q+H  V+K G+ L +  V N LV +Y + G +     +VF+ + ++D+VS+NS+I+ L
Sbjct: 290  GEQLHGLVLKQGFSLETY-VCNALVTLYSRLG-NFIPAEQVFNAMLQRDEVSYNSLISGL 347

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             + G  D ALE F+ M    ++P   T+ S+  ACS++     L +G+Q H  +++ G  
Sbjct: 348  SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG---ALLVGKQFHSYAIKAGMS 404

Query: 216  NTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  I+  AL+ +Y K   +  A   F S E  ++V WN ++ +    D   E+     QM
Sbjct: 405  SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM 464

Query: 275  ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + GI+P+  +  S+L  CS L  +D G++IH   L+      N +V S L+DMY    +
Sbjct: 465  QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF-NVYVSSVLIDMYAKLGK 523

Query: 335  VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            ++   ++F  + +K +  W AMI GY Q+E   EAL LF +M++  G+  +    +S + 
Sbjct: 524  LDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQD-QGIHSDNIGFASAIS 582

Query: 395  ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
            AC   +A    + IH  A   G   D  V NAL+ +Y+R G++  +   FD +  +D +S
Sbjct: 583  ACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNIS 642

Query: 455  WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            WN++I+G+   G   +AL L  +M    +E                  NS T    +   
Sbjct: 643  WNSLISGFAQSGHCEEALSLFSQMSKAGQE-----------------INSFTFGPAVSAA 685

Query: 515  GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
              ++ +  GK+IHA  I+    ++  V + L+ +YAKCG ++ A R F  MP +N I+WN
Sbjct: 686  ANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWN 745

Query: 575  VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
             ++  Y  HG G + L L ++M   G     V PN VTF+ + +ACSH G+V EG+  F 
Sbjct: 746  AMLTGYSQHGHGFKALSLFEDMKQLG-----VLPNHVTFVGVLSACSHVGLVDEGIKYFQ 800

Query: 635  KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
             M++ +G+ P P+HYACVVDLLGR+G +  A + +  MP + D A    +LL AC +H+N
Sbjct: 801  SMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPD-AMVCRTLLSACIVHKN 859

Query: 695  VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
            ++IGE AA +L  LEP  ++ YVLLSN+Y+    W      R+ MK+ GV+KEPG SWIE
Sbjct: 860  IDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIE 919

Query: 755  FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
              + +H F AGD  H   ++++ +L +L+E   + GY+P T+ +L++    +K      H
Sbjct: 920  VNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIH 979

Query: 815  SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
            SEKLAIAFG+L+    T I V KNLRVC DCH   K++SKI  R I++RD  RFHHFK G
Sbjct: 980  SEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGG 1039

Query: 875  TCSCGDYW 882
             CSC DYW
Sbjct: 1040 ICSCKDYW 1047



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 163/601 (27%), Positives = 283/601 (47%), Gaps = 44/601 (7%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
            S G ++H  ++K G+  + V +   L+++Y   G D+     VFD +  +    WN ++
Sbjct: 84  FSDGWKLHGKILKMGF-CAEVVLCERLMDLYIAFG-DLDGAVTVFDEMPVRPLSCWNKVL 141

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                       L  FR ML   V+P   T   V   C             ++H  ++  
Sbjct: 142 HRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVP--FHCVEKIHARTITH 199

Query: 213 GEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G  N+ F+ N L+ +Y K G ++ AK +F   + RD VSW  ++S LSQ+    EAV+  
Sbjct: 200 GYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLF 259

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            QM   G+ P     +SVL AC+ +E    G+++H   L+    ++ ++V +ALV +Y  
Sbjct: 260 CQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLE-TYVCNALVTLYSR 318

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
                   +VF+ +  +    +N++I+G  Q  Y ++AL LF KM  +  L P+  T++S
Sbjct: 319 LGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKM-CLDCLKPDCVTVAS 377

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++ AC    A    +  H +AIK G+  D  ++ AL+D+Y +   I+ +   F   E  +
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN M+  Y +     ++  +  +MQ ME                  +PN  T  ++L
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQ-MEG----------------IEPNQFTYPSIL 480

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C +L A+  G++IH   ++     +V V S L+DMYAK G L+ A ++F  +  ++V+
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +I  Y  H +  E L L K M  +G     +  + + F +  +AC+    +++G  
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQG-----IHSDNIGFASAISACAGIQALNQGQQ 595

Query: 632 LFYK-----MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSL 685
           +  +       DD  +  +      +V L  R GKV DAY   + +   F K   +W+SL
Sbjct: 596 IHAQACVSGYSDDLSVGNA------LVSLYARCGKVRDAYFAFDKI---FSKDNISWNSL 646

Query: 686 L 686
           +
Sbjct: 647 I 647



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 143/617 (23%), Positives = 259/617 (41%), Gaps = 108/617 (17%)

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLE-----------------AVMFLRQMALRGI 279
           KT FKS  ++ +  +  +VS      KFLE                  + FL  M  RG+
Sbjct: 6   KTYFKSIVNK-IKQFRPVVSIFFFFQKFLEHNTALSYAYSNDEGEANGINFLHLMEERGV 64

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           + +  +   +L  C        G ++H   L+     +   +   L+D+Y    +++   
Sbjct: 65  RANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAE-VVLCERLMDLYIAFGDLDGAV 123

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD +  + ++ WN ++  +   +     L LF +M +   + P+  T + V+  C   
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQ-EKVKPDERTYAGVLRGCGGG 182

Query: 400 EA-FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           +  F   E IH   I  G     +V N L+D+Y + G +  +K +FD ++ RD+VSW  M
Sbjct: 183 DVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAM 242

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ++G +  G   +A++L  +M         + VY          P      +VL  C  + 
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHT-------SGVY----------PTPYIFSSVLSACTKVE 285

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
               G+++H   ++   + +  V +ALV +Y++ G    A +VF+ M  R+ +++N +I 
Sbjct: 286 FYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLIS 345

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----------HSGMVS 627
                G   + LEL K M  +      +KP+ VT  +L +ACS           HS  + 
Sbjct: 346 GLSQQGYSDKALELFKKMCLDC-----LKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400

Query: 628 EGM-----------DLFYKMKD-----DYGIEPSPDHYAC---------VVDLLGRAGKV 662
            GM           DL+ K  D     ++ +    ++            ++D L  + K+
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKI 460

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE-IAAQNL---FLLEPDVASHYVL 718
               Q+  + P +F     + S+L  C   + V++GE I  Q L   F     V+S   +
Sbjct: 461 FTQMQMEGIEPNQF----TYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS---V 513

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ-SEQLHG 777
           L ++Y+     D A+ + +++KE  V      SW          +AG   H++ +E L  
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKEKDV-----VSWT-------AMIAGYAQHEKFAEAL-- 559

Query: 778 FLENLSERMRKEGYVPD 794
              NL + M+ +G   D
Sbjct: 560 ---NLFKEMQDQGIHSD 573


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 327/854 (38%), Positives = 479/854 (56%), Gaps = 48/854 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + SW   + +     Q + AI  +  M +  ++ D   F AVLKA A + DLS G+
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IHA +V+ G    SV +AN L+++YG CG  +     +F+R+ E+D VSWN+ IA   +
Sbjct: 149 SIHAWIVESGLEGKSV-LANLLLHIYGSCGC-VASAMLLFERM-ERDLVSWNAAIAANAQ 205

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G  D+ALE F+ M    V P+  TLV     C+ +      R  R +H      G   T
Sbjct: 206 SGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI------RQARAIHSIVRESGLEQT 259

Query: 218 FIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            +++ AL + YA+LG +D AK +F    +RD+VSWN ++ + +Q+    EA +   +M  
Sbjct: 260 LVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH 319

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI P  V++ +    CS L     G+ IHA AL   +  D   +G+AL+DMY  C   E
Sbjct: 320 EGIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRD-IVLGNALLDMYTRCGSPE 375

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F+ I    ++ WN MI G  Q    + AL LF +M+ + G+ P   T  +++ A 
Sbjct: 376 EARHLFEGIPGNAVS-WNTMIAGSSQKGQMKRALELFQRMQ-LEGMAPVRATYLNLLEAV 433

Query: 397 V----RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVR 450
                 + A  +   +H   +  G   +  +  A++ MY+  G I+ +   F    ME R
Sbjct: 434 ASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDR 493

Query: 451 -DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            D VSWN +I+  +  G    AL   R M             DL        PN IT + 
Sbjct: 494 HDVVSWNAIISSLSQHGHGKRALGFFRRM-------------DLHGVA----PNQITCVA 536

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-R 568
           VL  C   +AL +G  +H +   + + ++V V +AL  MY +CG L  AR +F+ + V R
Sbjct: 537 VLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           +V+ +N +I AY  +G   E L+L   M  EGSR     P+E +F+++ +ACSH G+  E
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSR-----PDEQSFVSVLSACSHGGLADE 651

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G ++F  M+  YGI PS DHYAC VD+LGRAG + DA +LI  M  +      W +LLGA
Sbjct: 652 GWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVK-PTVLVWKTLLGA 710

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR +++V+ G +A   +  L+P   S YV+LSNI + A  WD+A +VR +M+  G+RK+ 
Sbjct: 711 CRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQA 770

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE    +H+F+AGD SH +SE+++  LE L   +R+ GYVPDT  VL  V+E EKE
Sbjct: 771 GKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKE 830

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            LLC HSE+LAIA G++++    T+RV KNLRVC DCH ATKFISKI ++EI++RD  RF
Sbjct: 831 RLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRF 889

Query: 869 HHFKNGTCSCGDYW 882
           HHF +G+CSCGDYW
Sbjct: 890 HHFVDGSCSCGDYW 903



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 292/599 (48%), Gaps = 40/599 (6%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+A    + LS G++IHA +V  G       + N L+ +Y KC S + DV +VF R+  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKCES-LGDVEEVFSRLEV 90

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D+ SW ++I      G+   A+  F  M    V   + T ++V  AC+ L     L  G
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG---DLSQG 147

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R +H   +  G E  + + N L+ +Y   G V  A  LF+  E RDLVSWN  +++ +Q+
Sbjct: 148 RSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQS 206

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                A+   ++M L G++P  +++   L  C+ +      + IH+  +R   L     V
Sbjct: 207 GDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSI-VRESGLEQTLVV 262

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +AL   Y     ++  + VFD  +++ +  WNAM+  Y Q+ +  EA +LF +M    G
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH-EG 321

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + P+  T+ +    C    +      IH  A++ GL RD  + NAL+DMY+R G  E ++
Sbjct: 322 IPPSKVTLVNASTGC---SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F+ +   + VSWNTMI G +  GQ   AL L + MQ       R    +L E V    
Sbjct: 379 HLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNP 437

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
             +              A+A+G+++H+  +    A++  +G+A+V MYA CG ++ A   
Sbjct: 438 EEA-------------RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAAS 484

Query: 562 FD---LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           F    +    +V++WN II +   HG G+  L   + M   G     V PN++T +A+  
Sbjct: 485 FQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG-----VAPNQITCVAVLD 539

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           AC+ +  ++EG+ +   ++   G+E +      +  + GR G +E A ++   +  E D
Sbjct: 540 ACAGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVERD 597


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/840 (35%), Positives = 469/840 (55%), Gaps = 31/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   AR+    EA+  Y +M  S + P  +   +VL A         G+ +HA V
Sbjct: 110 SWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQV 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G   S   V N L+ +Y + GS +    +VF  +   D+V++N++I+   + G  + 
Sbjct: 170 YKQG-SCSETVVGNALIALYLRFGS-LSLAERVFSEMPYCDRVTFNTLISRHAQCGNGES 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
           ALE F  M  S   P   T+ S+  AC+++     L  G+Q+H   L+ G    +I+  +
Sbjct: 228 ALEIFEEMRLSGWTPDCVTIASLLAACASIG---DLNKGKQLHSYLLKAGMSPDYIIEGS 284

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G + +A  +FKS +  ++V WN ++ +  Q     ++     QM   G++P+
Sbjct: 285 LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPN 344

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C++   ++ G++IH  +++     D  +V   L+DMY     ++  RR+ 
Sbjct: 345 EFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD-MYVSGVLIDMYSKYGWLDKARRIL 403

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  K +  W +MI GY Q+E+ +EAL  F  M+ + G+WP+   ++S + AC   +A 
Sbjct: 404 EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ-LFGIWPDNIGLASAISACAGIKAM 462

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IH      G   D  + NAL+++Y+R GR + + ++F+ +E +D ++WN M++G+
Sbjct: 463 RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGF 522

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G + +AL +  +M                      K N  T ++ +     L+ + +
Sbjct: 523 AQSGLYEEALEVFIKMYQAG-----------------VKYNVFTFVSSISASANLADIKQ 565

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+    ++  V +AL+ +Y KCG +  A+  F  M  RN ++WN II +   
Sbjct: 566 GKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQ 625

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M  ++GI
Sbjct: 626 HGWGLEALDLFDQMKQEG-----LKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGI 680

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACVVD+LGRAG+++ A + +  MP   + A  W +LL ACR+H+N+EIGE+AA
Sbjct: 681 HPRPDHYACVVDILGRAGQLDRARKFVEEMPVSAN-AMVWRTLLSACRVHKNIEIGELAA 739

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + L  LEP  ++ YVLLSN Y+    W     VRK MK+ GVRKEPG SWIE  + +H F
Sbjct: 740 KYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAF 799

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  + Q++ +L +L +R+ K GY+     + H   +E+K+     HSEKLA+AF
Sbjct: 800 FVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAF 859

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+++ PP   +RV KNLRVCNDCH   KF S++  REI+LRDV RFHHF NG CSCGD+W
Sbjct: 860 GLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 300/618 (48%), Gaps = 40/618 (6%)

Query: 80  FPAVLKAVAG-IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           F   L+   G ++   L   IHA  +  G G   +   N L+++Y K G  +    +VF+
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIA-GNLLIDLYAKKGL-VQRARRVFE 101

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           +++ +D VSW +M++   R G  + A+  +  M  S V P+ + L SV  AC+  +    
Sbjct: 102 QLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAAL--- 158

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
              GR VH    + G  + T + NAL+A+Y + G +  A+ +F      D V++NT++S 
Sbjct: 159 FEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISR 218

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +Q      A+    +M L G  PD V+IAS+L AC+ +  L+ GK++H+Y L+  +  D
Sbjct: 219 HAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPD 278

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
               GS L+D+Y  C  +     +F       + LWN M+  YGQ     ++  LF +M 
Sbjct: 279 YIIEGS-LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQM- 336

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             AG+ PN  T   ++  C  +      E IH  +IK G   D YV   L+DMYS+ G +
Sbjct: 337 VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWL 396

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLD 494
           + ++ I + +E +D VSW +MI GY    QH    +AL   ++MQ               
Sbjct: 397 DKARRILEVLEAKDVVSWTSMIAGYV---QHEFCKEALETFKDMQ--------------- 438

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +    P++I L + +  C  + A+ +G++IH+    +  + DV + +ALV++YA+CG 
Sbjct: 439 --LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGR 496

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
              A  +F+ +  ++ ITWN ++  +   G  +E LE+   M   G     VK N  TF+
Sbjct: 497 SKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG-----VKYNVFTFV 551

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +  +A ++   + +G  +   +    G     +    ++ L G+ G +EDA      M  
Sbjct: 552 SSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMSE 610

Query: 675 EFDKAGAWSSLLGACRIH 692
                 +W++++ +C  H
Sbjct: 611 R--NHVSWNTIITSCSQH 626



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 29/494 (5%)

Query: 183 LVSVALACSNLSRRDGLR---LGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKT 238
           L SV  AC+    R  ++   L   +H  ++  G     I  N L+ +YAK G V  A+ 
Sbjct: 39  LGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARR 98

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F+    RD VSW  ++S  ++N    EAV    QM   G+ P    ++SVL AC+   +
Sbjct: 99  VFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAAL 158

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
            + G+ +HA   +       + VG+AL+ +Y     +    RVF  +       +N +I+
Sbjct: 159 FEQGRLVHAQVYKQGS-CSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLIS 217

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            + Q    E AL +F +M  ++G  P+  T++S++ AC         + +H + +K G+ 
Sbjct: 218 RHAQCGNGESALEIFEEM-RLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMS 276

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  ++ +L+D+Y + G I  +  IF   +  + V WN M+  Y        +  L  +M
Sbjct: 277 PDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQM 336

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                                 +PN  T   +L  C     +  G++IH  +I+    +D
Sbjct: 337 -----------------VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + V   L+DMY+K G L+ ARR+ +++  ++V++W  +I  Y  H   +E LE  K+M  
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQL 439

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     + P+ +   +  +AC+    + +G  +  ++    G       +  +V+L  R
Sbjct: 440 FG-----IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYAR 493

Query: 659 AGKVEDAYQLINMM 672
            G+ ++A+ L   +
Sbjct: 494 CGRSKEAFSLFEAI 507



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 47/338 (13%)

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFI-KMEEVAGLWPNATTMSSVVPACVRSEA-- 401
           ++ +  A  N  +TG+  +E  E+ L LF  K+ +  GL        SV  AC   E   
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGL-------GSVDFACALRECRG 53

Query: 402 ----FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
               +P    IH  AI  GLG DR   N L+D+Y++ G ++ ++ +F+ +  RD VSW  
Sbjct: 54  SVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVA 113

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           M++GY   G   +A+ L  +M                 + + P P    L +VL  C   
Sbjct: 114 MLSGYARNGLGEEAVGLYHQMHC---------------SGVVPTP--YVLSSVLSACTKA 156

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           +   +G+ +HA   +    ++ VVG+AL+ +Y + G L+ A RVF  MP  + +T+N +I
Sbjct: 157 ALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLI 216

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF---- 633
             +   G G+  LE+ + M   G       P+ VT  +L AAC+  G +++G  L     
Sbjct: 217 SRHAQCGNGESALEIFEEMRLSG-----WTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
              M  DY IE S      ++DL  + G + +A ++  
Sbjct: 272 KAGMSPDYIIEGS------LLDLYVKCGVIVEALEIFK 303



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 90/153 (58%), Gaps = 4/153 (2%)

Query: 42  KESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           K +W   +   A+S  + EA+  +I+M ++ ++ + F F + + A A + D+  GKQIHA
Sbjct: 512 KITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHA 571

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            V+K G   S   VAN L+++YGKCGS + D    F  ++E++ VSWN++I +  + G W
Sbjct: 572 TVIKTG-CTSETEVANALISLYGKCGS-IEDAKMQFFEMSERNHVSWNTIITSCSQHG-W 628

Query: 162 DL-ALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            L AL+ F  M    ++P+  T + V  ACS++
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 661


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/841 (35%), Positives = 469/841 (55%), Gaps = 33/841 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A++    EA+  Y EM RS + P  +   ++L A    +   LG+ IH  V
Sbjct: 110 SWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQV 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            K G+  S   V N L+++Y +C S  + D  +VF  +   D V++N++I+   + G  D
Sbjct: 170 YKQGF-FSETFVGNALISLYLRCRSFRLAD--RVFCDMLYCDSVTFNTLISGHAQCGHGD 226

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-N 221
            AL  F  M  S + P S T+ S+  ACS +     LR G+Q+H   L+ G    +IM  
Sbjct: 227 RALGIFDEMQLSGLSPDSVTIASLLAACSAVG---DLRKGKQLHSYLLKAGMSLDYIMEG 283

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ +Y K G +++A  +F S +  ++V WN ++ +  Q D   ++     +M   G++P
Sbjct: 284 SLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRP 343

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +   +L  C+H   +  G++IH+  ++N    D  +V   L+DMY     ++  +R+
Sbjct: 344 NKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSD-MYVSGVLIDMYSKYGWLDKAQRI 402

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
            D I +K +  W +MI GY Q+E+ +EAL  F +M+   G+WP+   ++S + AC   +A
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQ-ACGIWPDNIGLASAISACAGIKA 461

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IH      G   D  + N L+ +Y+R G  + + + F+ +E ++ ++WN +I+G
Sbjct: 462 VHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISG 521

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G + +AL +  +M                      K N  T ++ +     L+ + 
Sbjct: 522 FAQSGLYEEALKVFMKMDQAG-----------------AKYNVFTFVSSISASANLADIK 564

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +GK+IHA  I+    ++  + +AL+ +Y KCG +  A+  F  M  RN ++WN II    
Sbjct: 565 QGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCS 624

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G E L+L   M  +G     +KP++VTF+ +  ACSH G+V EG+  F  M +++G
Sbjct: 625 QHGRGLEALDLFDQMKQQG-----LKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHG 679

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I P PDHYACVVD+LGRAG+++ A + +  MP   D    W +LL AC++H+N+EIGE A
Sbjct: 680 IHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSM-VWRTLLSACKVHKNLEIGEFA 738

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A++L  LEP  ++ YVLLSN Y+    W     +RK MK+ GVRKEPG SWIE  + +H 
Sbjct: 739 AKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHA 798

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD  H  ++Q++ FL +L++R+ K GY  +   + H   +E K+     HSEKLA+A
Sbjct: 799 FFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVA 858

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+++ P    +RV KNLRVCNDCH   KF S +  REI+LRDV RFHHF NG+CSCGDY
Sbjct: 859 FGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDY 918

Query: 882 W 882
           W
Sbjct: 919 W 919



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 306/619 (49%), Gaps = 42/619 (6%)

Query: 80  FPAVLKAVAGI-QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           F   L+A  G  +   L  +IHA  +  G     + + N L+++Y K G  +    +VF+
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRI-IGNLLIDLYAKKGF-VRRARRVFE 101

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            ++ +D VSW ++++   + G  + A+  +R M  S V P+ + L S+  AC   ++ + 
Sbjct: 102 ELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSAC---TKTEL 158

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            +LGR +H    + G ++ TF+ NAL+++Y +      A  +F      D V++NT++S 
Sbjct: 159 FQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISG 218

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +Q      A+    +M L G+ PD V+IAS+L ACS +  L  GK++H+Y L+  + +D
Sbjct: 219 HAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLD 278

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
               GS L+D+Y    ++E   ++FD      + LWN M+  YGQ +   ++  +F +M 
Sbjct: 279 YIMEGS-LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRM- 336

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             AG+ PN  T   ++  C  +      E IH   IK G   D YV   L+DMYS+ G +
Sbjct: 337 LAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWL 396

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLD 494
           + ++ I D +E +D VSW +MI GY    QH    +AL   +EMQ          ++   
Sbjct: 397 DKAQRILDMIEEKDVVSWTSMIAGYV---QHEFCKEALETFKEMQAC-------GIW--- 443

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P++I L + +  C  + A+ +G +IHA    +  + DV + + LV +YA+CG 
Sbjct: 444 -------PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI 496

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
              A   F+ +  +  ITWN +I  +   G  +E L++   M   G+     K N  TF+
Sbjct: 497 SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA-----KYNVFTFV 551

Query: 615 ALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +  +A ++   + +G  +  + +K  Y  E    +   ++ L G+ G +EDA      M 
Sbjct: 552 SSISASANLADIKQGKQIHARVIKTGYTSETEISN--ALISLYGKCGSIEDAKMDFFEMT 609

Query: 674 PEFDKAGAWSSLLGACRIH 692
              +   +W++++  C  H
Sbjct: 610 KRNEV--SWNTIITCCSQH 626


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/733 (39%), Positives = 426/733 (58%), Gaps = 30/733 (4%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           ++ LC+ G+   AL     M+       S     +   C+ L     L  GR+VH   L+
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLR---SLEQGREVHAAILK 75

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G + N ++ N L++MYAK G + DA+ +F S  DR++VSW  ++ +    +K LEA   
Sbjct: 76  SGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKC 135

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M L G KPD V+  S+L A ++ E+L  G+++H   +   + ++   VG++LV MY 
Sbjct: 136 YETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR-VGTSLVGMYA 194

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C ++   R +FD + +K +  W  +I GY Q    + AL L   M++ A + PN  T +
Sbjct: 195 KCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQ-AEVAPNKITFA 253

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++  C    A    + +H + I+ G GR+ +V N+L+ MY + G +E ++ +F D+  R
Sbjct: 254 SILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR 313

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V+W  M+TGY   G H +A+ L R MQ                     KP+ +T  +V
Sbjct: 314 DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG-----------------IKPDKMTFTSV 356

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C + + L +GK IH   +      DV + SALV MYAKCG ++ A  VF+ M  RNV
Sbjct: 357 LTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416

Query: 571 ITWNVIIMAY-GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           + W  II      HG  +E LE    M  +G     +KP++VTF ++ +AC+H G+V EG
Sbjct: 417 VAWTAIITGCCAQHGRCREALEYFDQMKKQG-----IKPDKVTFTSVLSACTHVGLVEEG 471

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              F  M  DYGI+P  +HY+C VDLLGRAG +E+A  +I  MP        W +LL AC
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPF-IPGPSVWGALLSAC 530

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R+H +VE GE AA+N+  L+PD    YV LS+IY++A  ++ A  VR+ M++  V KEPG
Sbjct: 531 RVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPG 590

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
            SWIE   ++H F   D SH +SEQ++  L  L+E++++ GYVPDT  VLH+V+EE+KE 
Sbjct: 591 QSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKER 650

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSE+LAI +G++ TPPG  IR+ KNLRVC DCH ATKFISK+  REII RD +RFH
Sbjct: 651 ILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFH 710

Query: 870 HFKNGTCSCGDYW 882
           HF +G CSCGD+W
Sbjct: 711 HFADGVCSCGDFW 723



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 260/513 (50%), Gaps = 34/513 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  +L+  A ++ L  G+++HA ++K G   +   + NTL++MY KCGS + D  +VFD 
Sbjct: 50  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRY-LENTLLSMYAKCGS-LTDARRVFDS 107

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I +++ VSW +MI       K   A + +  M  +  +P   T VS+  A +N    + L
Sbjct: 108 IRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTN---PELL 164

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           +LG++VH   +  G E    +  +L+ MYAK G +  A+ +F    ++++V+W  +++  
Sbjct: 165 QLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGY 224

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q  +   A+  L  M    + P+ ++ AS+L  C+    L+ GK++H Y +++    + 
Sbjct: 225 AQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE- 283

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            +V ++L+ MYC C  +E  R++F  +  + +  W AM+TGY Q  + +EA+ LF +M++
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ P+  T +SV+ +C       + + IH   +  G   D Y+Q+AL+ MY++ G ++
Sbjct: 344 -QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMD 402

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F+ M  R+ V+W  +ITG   C QHG     L     M+++              
Sbjct: 403 DASLVFNQMSERNVVAWTAIITG--CCAQHGRCREALEYFDQMKKQG------------- 447

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHA-----YAIRNMLATDVVVGSALVDMYAKCG 553
             KP+ +T  +VL  C  +  + +G++        Y I+ M+       S  VD+  + G
Sbjct: 448 -IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY----SCFVDLLGRAG 502

Query: 554 CLNFARRVFDLMP-VRNVITWNVIIMAYGMHGE 585
            L  A  V   MP +     W  ++ A  +H +
Sbjct: 503 HLEEAENVILSMPFIPGPSVWGALLSACRVHSD 535



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 221/443 (49%), Gaps = 16/443 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +    N+  EA   Y  M  +  +PD   F ++L A    + L LG+++H  +
Sbjct: 115 SWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEI 174

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G  L    V  +LV MY KCG D+     +FDR+ EK+ V+W  +IA   + G+ D+
Sbjct: 175 VEAGLELEP-RVGTSLVGMYAKCG-DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNA 222
           ALE    M  + V P+  T  S+   C+  +    L  G++VH   ++ G     +++N+
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPA---ALEHGKKVHRYIIQSGYGRELWVVNS 289

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G +++A+ LF     RD+V+W  +V+  +Q     EA+   R+M  +GIKPD
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++  SVL +CS    L  GK IH   +     +D  ++ SALV MY  C  ++    VF
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD-VYLQSALVSMYAKCGSMDDASLVF 408

Query: 343 DFISDKKIALWNAMITG-YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           + +S++ +  W A+ITG   Q+    EAL  F +M++  G+ P+  T +SV+ AC     
Sbjct: 409 NQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK-QGIKPDKVTFTSVLSACTHV-G 466

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTM 458
             ++   H  ++ L  G    V++    +D+  R G +E ++ +   M      S W  +
Sbjct: 467 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGAL 526

Query: 459 ITGYTICGQHGDALMLLREMQNM 481
           ++    C  H D     R  +N+
Sbjct: 527 LSA---CRVHSDVERGERAAENV 546


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 291/735 (39%), Positives = 448/735 (60%), Gaps = 29/735 (3%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SL 210
           I  LC  G    AL+  +      V  S+    ++ +      +R  + +GR++H   S 
Sbjct: 74  IKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSA 133

Query: 211 RVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV- 268
                N F++N  ++ MY+  G   D++ +F     ++L  WN IVS+ ++N+ F +A+ 
Sbjct: 134 STQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMS 193

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           +F   +++   KPD  ++  V+ AC+ L  L  G+ IH  A + D L+ + FVG+AL+ M
Sbjct: 194 IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMD-LVSDVFVGNALIAM 252

Query: 329 YCNCREVE-CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           Y  C  VE   +RVFD +  K ++ WNA++ GY QN    +AL L+++M + +GL P+  
Sbjct: 253 YGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTD-SGLDPDWF 311

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T+ S++ AC R ++    E IHG A++ GL  D ++  +L+ +Y   G+   ++ +FD M
Sbjct: 312 TIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM 371

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           E R  VSWN MI GY+  G   +A+ L R+M              L + +   +P  I +
Sbjct: 372 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQM--------------LSDGI---QPYEIAI 414

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           M V   C  LSAL  GKE+H +A++  L  D+ V S+++DMYAK GC+  ++R+FD +  
Sbjct: 415 MCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE 474

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++V +WNVII  YG+HG G+E LEL + M+  G     +KP++ TF  +  ACSH+G+V 
Sbjct: 475 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLG-----LKPDDFTFTGILMACSHAGLVE 529

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G++ F +M + + IEP  +HY CVVD+LGRAG+++DA +LI  MP + D +  WSSLL 
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD-SRIWSSLLS 588

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           +CRIH N+ +GE  A  L  LEP+   +YVL+SN+++ +  WD    VR +MK++G++K+
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 648

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
            GCSWIE G ++H FL GD    + E++      L  ++   GY PDT  VLH++ EE+K
Sbjct: 649 AGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDK 708

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
             +L GHSEKLAI+FG+LNT  G  +RV KNLR+C DCH A KFISK+ +R+I++RD +R
Sbjct: 709 IGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKR 768

Query: 868 FHHFKNGTCSCGDYW 882
           FHHF++G CSCGDYW
Sbjct: 769 FHHFRDGICSCGDYW 783



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 241/456 (52%), Gaps = 22/456 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   + +  R+  F +A+  + E+ + ++ +PDNF  P V+KA AG+ DL LG+ IH   
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 234

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    +S V V N L+ MYGKCG     V +VFD +  K   SWN+++    +      
Sbjct: 235 TKMDL-VSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRK 293

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ +  M  S ++P  FT+ S+ LAC   SR   L  G ++HG +LR G   + FI  +
Sbjct: 294 ALDLYLQMTDSGLDPDWFTIGSLLLAC---SRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+++Y   G+   A+ LF   E R LVSWN +++  SQN    EA+   RQM   GI+P 
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++I  V  ACS L  L  GKE+H +AL+   L ++ FV S+++DMY     +   +R+F
Sbjct: 411 EIAIMCVCGACSQLSALRLGKELHCFALKAH-LTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS--- 399
           D + +K +A WN +I GYG +   +EAL LF KM  + GL P+  T + ++ AC  +   
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL-GLKPDDFTFTGILMACSHAGLV 528

Query: 400 ----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
               E F     +H    KL    + Y    ++DM  R GRI+ +  + ++M    D+  
Sbjct: 529 EDGLEYFNQMLNLHNIEPKL----EHY--TCVVDMLGRAGRIDDALRLIEEMPGDPDSRI 582

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           W+++++   I G  G    +  ++  +E EK  N V
Sbjct: 583 WSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/618 (27%), Positives = 299/618 (48%), Gaps = 45/618 (7%)

Query: 15  PLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ 74
           P++SL        T  SL    S T  + S +  ++    S   +EA L +++    D+ 
Sbjct: 41  PIASLSLSAQTRQT-KSLSFANSSTNRQFSSLHEIKKLCESGNLKEA-LDFLQRESDDVV 98

Query: 75  PDNF----AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
            D+     A   +L+A    +D+ +G+++H  V       +   +   ++ MY  CGS  
Sbjct: 99  LDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPS 158

Query: 131 WDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALA 189
            D   VFD++  K+   WN++++   R   ++ A+  F  ++  +  +P +FTL  V  A
Sbjct: 159 -DSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 217

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA-KTLFKSFEDRD 247
           C+ L     L LG+ +HG + ++    + F+ NAL+AMY K G V++A K +F   + + 
Sbjct: 218 CAGLL---DLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKT 274

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           + SWN ++   +QN    +A+    QM   G+ PD  +I S+L ACS ++ L  G+EIH 
Sbjct: 275 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 334

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           +ALRN + +D  F+G +L+ +Y  C +    + +FD +  + +  WN MI GY QN   +
Sbjct: 335 FALRNGLAVD-PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPD 393

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EA+ LF +M    G+ P    +  V  AC +  A    + +H  A+K  L  D +V +++
Sbjct: 394 EAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSI 452

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY++ G I +S+ IFD +  +D  SWN +I GY I G+  +AL L  +M         
Sbjct: 453 IDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR------- 505

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALV 546
                     L  KP+  T   +L  C     +  G E     +  + +   +   + +V
Sbjct: 506 ----------LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVV 555

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSR 602
           DM  + G ++ A R+ + MP   +   W+ ++ +  +HG    G++V   L  +  E   
Sbjct: 556 DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--- 612

Query: 603 GGEVKPNEVTFIA-LFAA 619
               KP     I+ LFA 
Sbjct: 613 ----KPENYVLISNLFAG 626


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 298/841 (35%), Positives = 474/841 (56%), Gaps = 33/841 (3%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW+  +   +++    EAI  + +M    I P  +AF +VL A   I+ L +G+Q+H  V
Sbjct: 238  SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 297

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K G+  S   V N LV++Y   GS +     +F  ++++D V++N++I  L + G  + 
Sbjct: 298  LKLGFS-SDTYVCNALVSLYFHLGS-LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 355

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG-LRLGRQVHGNSLRVG-EWNTFIMN 221
            A+E F+ M    +EP S TL S+ +ACS+    DG L  G+Q+H  + ++G   N  I  
Sbjct: 356  AMELFKRMQLDGLEPDSNTLASLVVACSS----DGTLFSGQQLHAYTTKLGFASNDKIEG 411

Query: 222  ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            AL+ +YAK   ++ A   F   E  ++V WN ++ +    D    +    RQM +  I P
Sbjct: 412  ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471

Query: 282  DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            +  +  S+L  C  L  L+ G++IH+  ++    + N++V S L+DMY    +++    +
Sbjct: 472  NQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL-NAYVCSVLIDMYAKLGKLDTAWDI 530

Query: 342  FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
                + K +  W  MI GY Q  +D++AL  F +M +  G+  +   +++ V AC   +A
Sbjct: 531  LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQA 589

Query: 402  FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
              + + IH  A   G   D   QNAL+ +YS+ G IE +   F+  E  D ++WN +++G
Sbjct: 590  LKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSG 649

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            +   G + +AL +   M       NR  +            N+ T  + +      + + 
Sbjct: 650  FQQSGNNEEALRVFARM-------NREGI----------DSNNFTFGSAVKAASETANMK 692

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            +GK++HA   +    ++  V +A++ MYAKCG ++ A++ F  + ++N ++WN +I AY 
Sbjct: 693  QGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYS 752

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             HG G E L+    M+        V+PN VT + + +ACSH G+V +G++ F  M  +YG
Sbjct: 753  KHGFGSEALDSFDQMIH-----SNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYG 807

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            + P P+HY CVVD+L RAG +  A   I  MP E D A  W +LL AC +H+N+EIGE A
Sbjct: 808  LAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPD-ALVWRTLLSACVVHKNMEIGEFA 866

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            A +L  LEP+ ++ YVLLSN+Y+  + WD     R+KMKE GV+KEPG SWIE  + IH 
Sbjct: 867  AHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 926

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
            F  GD +H  ++++H + ++L++R  + GYV D   +L  + +E+K+  +  HSEKLAI+
Sbjct: 927  FYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAIS 986

Query: 822  FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            FG+L+ P    I V KNLRVCNDCH   KF+SK+ +REII+RD  RFHHF+ G CSC DY
Sbjct: 987  FGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1046

Query: 882  W 882
            W
Sbjct: 1047 W 1047



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 288/608 (47%), Gaps = 38/608 (6%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  G+++H+ ++K G+  ++  ++  L++ Y   G D+    KVFD + E+   +WN MI
Sbjct: 84  LDEGRKLHSQILKLGFD-NNACLSEKLLDFYLFKG-DLDGALKVFDEMPERTIFTWNKMI 141

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
             L            F  M+  NV P+  T   V  AC   S      +  Q+H   +  
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV--AFDVVEQIHARIIYQ 199

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   +T + N L+ +Y++ G VD A+ +F     +D  SW  ++S LS+N+  +EA+   
Sbjct: 200 GLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
             M + GI P   + +SVL AC  +E L+ G+++H   L+     D ++V +ALV +Y +
Sbjct: 260 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNALVSLYFH 318

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              +     +F  +S +    +N +I G  Q  Y E+A+ LF +M ++ GL P++ T++S
Sbjct: 319 LGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-QLDGLEPDSNTLAS 377

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           +V AC         + +H +  KLG   +  ++ AL+++Y++   IE +   F + EV +
Sbjct: 378 LVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN M+  Y +     ++  + R+MQ             ++E V    PN  T  ++L
Sbjct: 438 VVLWNVMLVAYGLLDDLRNSFRIFRQMQ-------------IEEIV----PNQYTYPSIL 480

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L  L  G++IH+  I+     +  V S L+DMYAK G L+ A  +      ++V+
Sbjct: 481 KTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 540

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +I  Y  +    + L   + M+  G     ++ +EV      +AC+    + EG  
Sbjct: 541 SWTTMIAGYTQYNFDDKALTTFRQMLDRG-----IRSDEVGLTNAVSACAGLQALKEGQQ 595

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG---AWSSLLGA 688
           + +      G          +V L  + G +E+AY     +  E  +AG   AW++L+  
Sbjct: 596 I-HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAY-----LAFEQTEAGDNIAWNALVSG 649

Query: 689 CRIHQNVE 696
            +   N E
Sbjct: 650 FQQSGNNE 657



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 143/353 (40%), Gaps = 86/353 (24%)

Query: 501 KPNSITLMTVLPGCGALS-ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           +PN  TL  +L GC   + +L +G+++H+  ++     +  +   L+D Y   G L+ A 
Sbjct: 64  RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGAL 123

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +VFD MP R + TWN +I          +V  L   MV E      V PNE TF  +  A
Sbjct: 124 KVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNEN-----VTPNEGTFSGVLEA 178

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN--------- 670
           C    +  + ++  +      G+  S      ++DL  R G V+ A ++ +         
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238

Query: 671 ----------------------------MMPPEFDKAGAWSSLLGACRIHQNVEIGE--- 699
                                       +MP  +    A+SS+L AC+  +++EIGE   
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPY----AFSSVLSACKKIESLEIGEQLH 294

Query: 700 ----------------------------IAAQNLF--LLEPDVASHYVLLSNIYSSAQLW 729
                                       I+A+++F  + + D  ++  L++ + S     
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGL-SQCGYG 353

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +KAM++ K+M+  G+  EP  + +     +    + DG+    +QLH +   L
Sbjct: 354 EKAMELFKRMQLDGL--EPDSNTLA---SLVVACSSDGTLFSGQQLHAYTTKL 401


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 291/840 (34%), Positives = 470/840 (55%), Gaps = 31/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A+    +EA   Y +M  + + P  +   +VL A    +  + G+ IHA V
Sbjct: 111 SWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQV 170

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  +  S   V N L+ +Y   GS      +VF  +   D+V++N++I+   + G  + 
Sbjct: 171 YKQAF-CSETFVGNALIALYLGFGSFKL-AERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F  M  S + P   T+ S+  AC+++     L+ G+Q+H   L+ G  ++     +
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVG---DLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++ A  +F   +  ++V WN ++ +  Q     ++     QM   GI P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C+    ++ G++IH+ +++N    D  +V   L+DMY   R ++  R++ 
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD-MYVSGVLIDMYSKYRCLDKARKIL 404

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  + +  W +MI GY Q+++ EEAL  F +M++  G+WP+   ++S   AC   +A 
Sbjct: 405 EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD-CGVWPDNIGLASAASACAGIKAM 463

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH      G   D  + N L+++Y+R GR E + ++F +++ +D ++WN +I+G+
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGF 523

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                +  ALM+  +M                      K N  T ++ +     L+ + +
Sbjct: 524 GQSRLYEQALMVFMKMSQAG-----------------AKYNVFTFISAISALANLADIKQ 566

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK++H  A++    ++  V +AL+ +Y KCG +  A+ +F  M +RN ++WN II +   
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M + YG+
Sbjct: 627 HGRGLEALDLFDQMKQEG-----LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL 681

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACVVD+LGRAG+++ A + ++ MP   + A  W +LL AC++H+N+EIGE+AA
Sbjct: 682 NPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN-AMIWRTLLSACKVHKNIEIGELAA 740

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           ++L  LEP  ++ YVLLSN Y+    W     VRK MK+ G+RKEPG SWIE  + +H F
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAF 800

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  S+Q++ FL  L++R+ K GY  +   + H   +E+K+     HSEKLA+AF
Sbjct: 801 FVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAF 860

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G++  PP   +RV KNLRVC+DCH   KF S++  REI+LRDV RFHHF +G+CSCGDYW
Sbjct: 861 GLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 172/602 (28%), Positives = 297/602 (49%), Gaps = 45/602 (7%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IHA  V  G G   + + N L+++Y K G  +W   +VF  ++ +D VSW +M++   +
Sbjct: 64  EIHATSVVRGLGADRL-IGNLLIDLYAKNGL-VWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 158 FGKWDLALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
            G   L  EAFR+   M ++ V P+ + L SV  AC   ++      GR +H    +   
Sbjct: 122 RG---LGKEAFRLYSQMHWTAVIPTPYVLSSVLSAC---TKGKLFAQGRMIHAQVYKQAF 175

Query: 215 WN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            + TF+ NAL+A+Y   G    A+ +F      D V++NT++S  +Q      A+    +
Sbjct: 176 CSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDE 235

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L G++PD V++AS+L AC+ +  L  GK++H+Y L+  +  D    GS L+D+Y  C 
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCG 294

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           ++E    +F+      + LWN M+  YGQ     ++  +F +M +  G+ PN  T   ++
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM-QATGIHPNKFTYPCIL 353

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
             C  +      E IH  +IK G   D YV   L+DMYS+   ++ ++ I + +E RD V
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413

Query: 454 SWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           SW +MI GY    QH    +AL   +EMQ+         V+          P++I L + 
Sbjct: 414 SWTSMIAGYV---QHDFCEEALATFKEMQDC-------GVW----------PDNIGLASA 453

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
              C  + A+ +G +IHA    +  A D+ + + LV++YA+CG    A  +F  +  ++ 
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDE 513

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ITWN +I  +G     ++ L +   M   G+     K N  TFI+  +A ++   + +G 
Sbjct: 514 ITWNGLISGFGQSRLYEQALMVFMKMSQAGA-----KYNVFTFISAISALANLADIKQGK 568

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            +  +     G     +    ++ L G+ G +EDA  + + M        +W++++ +C 
Sbjct: 569 QVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEM--SLRNEVSWNTIITSCS 625

Query: 691 IH 692
            H
Sbjct: 626 QH 627



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 229/483 (47%), Gaps = 30/483 (6%)

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC     R  L L  ++H  S+  G   +  I N L+ +YAK G V  A+ +FK    RD
Sbjct: 51  ACRGRGNRWPLVL--EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSW  ++S  +Q     EA     QM    + P    ++SVL AC+  ++   G+ IHA
Sbjct: 109 HVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVF-DFISDKKIALWNAMITGYGQNEYD 366
              +       +FVG+AL+ +Y      +   RVF D +   ++  +N +I+G+ Q  + 
Sbjct: 169 QVYKQ-AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVT-FNTLISGHAQCGHG 226

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           E AL +F +M +++GL P+  T++S++ AC         + +H + +K G+  D   + +
Sbjct: 227 ECALQIFDEM-QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+D+Y + G IE +  IF+  +  + V WN M+  Y        +  +  +MQ       
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ------- 338

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                          PN  T   +L  C     +  G++IH+ +I+N   +D+ V   L+
Sbjct: 339 ----------ATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLI 388

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMY+K  CL+ AR++ +++  R+V++W  +I  Y  H   +E L   K M   G     V
Sbjct: 389 DMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG-----V 443

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
            P+ +   +  +AC+    + +G+ +  ++    G       +  +V+L  R G+ E+A+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAF 502

Query: 667 QLI 669
            L 
Sbjct: 503 SLF 505



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 34/289 (11%)

Query: 389 MSSVVPACV-RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           ++  + AC  R   +P    IH  ++  GLG DR + N L+D+Y++ G +  ++ +F ++
Sbjct: 45  LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSW  M++GY   G   +A  L  +M                 T + P P    L
Sbjct: 105 SSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH---------------WTAVIPTP--YVL 147

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +VL  C      A+G+ IHA   +    ++  VG+AL+ +Y   G    A RVF  M  
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            + +T+N +I  +   G G+  L++   M   G     ++P+ VT  +L AAC+  G + 
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSG-----LRPDCVTVASLLAACASVGDLQ 262

Query: 628 EGMDLF-YKMKD----DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           +G  L  Y +K     DY  E S      ++DL  + G +E A+ + N+
Sbjct: 263 KGKQLHSYLLKAGMSFDYITEGS------LLDLYVKCGDIETAHDIFNL 305


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 298/805 (37%), Positives = 462/805 (57%), Gaps = 65/805 (8%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL---------------- 155
           S+   N L+N   K G  + D  K+FD++ +KD+ SWN+MI++                 
Sbjct: 64  SIYQTNQLLNQLSKSGQ-VNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122

Query: 156 ---------------CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
                          C+FG    A + FR M     + S FTL SV   CS+L     ++
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGL---IQ 179

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSS 257
            G  +HG  ++ G E N F++  L+ MYAK   V +A+ LFK   F+ ++ V W  +V+ 
Sbjct: 180 TGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTG 239

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +QN    +AV F R M  +G++ +  +  ++L ACS +     G+++H + +++     
Sbjct: 240 YAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG-FGS 298

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N +V SALVDMY  C +++  + + + + D  +  WN+++ G+ ++  +EEAL LF  M 
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
               +  +  T  SV+  CV     P  + +HG  IK G    + V NAL+DMY++ G +
Sbjct: 359 G-RNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSNALVDMYAKTGDM 415

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + + T+F+ M  +D +SW +++TGY     H ++L +  +M+                 V
Sbjct: 416 DCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMR-----------------V 458

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P+   + ++L  C  L+ L  GK++H   I++ L     V ++LV MYAKCGCL+ 
Sbjct: 459 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 518

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  +F  M V++VITW  II+ Y  +G+G+  L+    MV+ G+R     P+ +TFI L 
Sbjct: 519 ADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTR-----PDFITFIGLL 573

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            ACSH+G+V EG   F +M   YGI+P P+HYAC++DL GR+GK+++A QL++ M  + D
Sbjct: 574 FACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPD 633

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
            A  W SLL ACR+H+N+E+ E AA NLF LEP  A  YV+LSN+YS+++ W+    +RK
Sbjct: 634 -ATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRK 692

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK  G+ KEPGCSW+E    ++ F++ D  H +  +++  ++ +  R+++ GYVPD S 
Sbjct: 693 LMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSF 752

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
            LH++++E KE  L  HSEKLA+AFG+L  PP   IR+ KNLRVC DCH A K+IS++ +
Sbjct: 753 SLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFT 812

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           R IILRD   FHHF+ G CSCGDYW
Sbjct: 813 RHIILRDSNCFHHFREGECSCGDYW 837



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 268/544 (49%), Gaps = 47/544 (8%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA   +  M     +   F   +VL+  + +  +  G+ IH  VVK G+   +V V   L
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFE-GNVFVVTGL 203

Query: 120 VNMYGKCG--SDMWDVYK--VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           V+MY KC   S+   ++K   FDR   K+ V W +M+    + G    A+E FR M    
Sbjct: 204 VDMYAKCKCVSEAEFLFKGLEFDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG 260

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           VE + +T  ++  ACS++  R     G QVHG  ++ G   N ++ +AL+ MYAK G + 
Sbjct: 261 VECNQYTFPTILTACSSVLAR---CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLK 317

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           +AK + ++ ED D+VSWN+++    ++    EA+   + M  R +K D  +  SVL  C 
Sbjct: 318 NAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV 377

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
              +    K +H   ++     +   V +ALVDMY    +++C   VF+ + +K +  W 
Sbjct: 378 VGSI--NPKSVHGLIIKTG-FENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWT 434

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           +++TGY QN   EE+L +F  M  V G+ P+   ++S++ AC         + +H   IK
Sbjct: 435 SLVTGYAQNNSHEESLKIFCDM-RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            GL   + V N+L+ MY++ G ++ +  IF  M+V+D ++W  +I GY    Q+G     
Sbjct: 494 SGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGY---AQNG----- 545

Query: 475 LREMQNMEEEKNRNNVYDLDETVLR-PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
                     K RN++   D  V    +P+ IT + +L  C     + +G++   Y  + 
Sbjct: 546 ----------KGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK---YFQQM 592

Query: 534 MLATDVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQE 588
                +  G    + ++D++ + G L+ A+++ D M V+ +   W  ++ A  +H    E
Sbjct: 593 NKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH----E 648

Query: 589 VLEL 592
            LEL
Sbjct: 649 NLEL 652



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 226/448 (50%), Gaps = 27/448 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A++    +A+  +  M    ++ + + FP +L A + +     G+Q+H  +V
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S+V V + LV+MY KCG D+ +   + + + + D VSWNS++    R G  + A
Sbjct: 293 KSGFG-SNVYVQSALVDMYAKCG-DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEA 350

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNAL 223
           L  F+ M   N++   +T  SV   C   S        + VHG  ++ G  N   + NAL
Sbjct: 351 LRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP-----KSVHGLIIKTGFENYKLVSNAL 405

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +D A T+F+   ++D++SW ++V+  +QN+   E++     M + G+ PD 
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
             +AS+L AC+ L +L+ GK++H   +++ +    S V ++LV MY  C  ++    +F 
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS-VYNSLVAMYAKCGCLDDADAIFV 524

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS---- 399
            +  K +  W A+I GY QN     +L  +  M   +G  P+  T   ++ AC  +    
Sbjct: 525 SMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVS-SGTRPDFITFIGLLFACSHAGLVD 583

Query: 400 ---EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
              + F     ++G    +  G + Y    ++D++ R G+++ +K + D M+V+ D   W
Sbjct: 584 EGRKYFQQMNKVYG----IKPGPEHYA--CMIDLFGRSGKLDEAKQLLDQMDVKPDATVW 637

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEE 483
            ++++    C  H +  +  R   N+ E
Sbjct: 638 KSLLSA---CRVHENLELAERAATNLFE 662



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 8/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++N   E++  + +M  + + PD F   ++L A A +  L  GKQ+H   
Sbjct: 432 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 491

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S  +V N+LV MY KCG  + D   +F  +  KD ++W ++I    + GK   
Sbjct: 492 IKSGLRWSQ-SVYNSLVAMYAKCGC-LDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRN 549

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHG-NSLRVGEWNTFIMN 221
           +L+ +  M+ S   P   T + +  ACS+    D G +  +Q++    ++ G  +   M 
Sbjct: 550 SLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACM- 608

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
             + ++ + G++D+AK L    + + D   W +++S+
Sbjct: 609 --IDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/733 (38%), Positives = 432/733 (58%), Gaps = 29/733 (3%)

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           M+    + G +      FR ++     P ++TL  V  AC +L     L++GR +H    
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK---NLQMGRLIHHIVY 57

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G + + F+  AL+ MY K   ++DA+ LF   ++RDLV+W  ++   ++  K  E+++
Sbjct: 58  KFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 117

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              +M   G+ PD V++ +V+ AC+ L  +   + I  Y  R    +D   +G+A++DMY
Sbjct: 118 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD-VILGTAMIDMY 176

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  VE  R +FD + +K +  W+AMI  YG +    +AL LF +M   +G+ P+  T+
Sbjct: 177 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMMLSSGMLPDKITL 235

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ AC   +       IH    K GL  D +V  AL+DMY +   IE ++ +FD M  
Sbjct: 236 ASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE 295

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD V+W  MI GY  CG   ++L+L  +M+              +E V+   P+ + ++T
Sbjct: 296 RDLVTWTVMIGGYAECGNANESLVLFDKMR--------------EEGVV---PDKVAMVT 338

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           V+  C  L A+ K + I  Y  R     DV++G+A++DM+AKCGC+  AR +FD M  +N
Sbjct: 339 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 398

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           VI+W+ +I AYG HG+G++ L+L   M+  G     + PN++T ++L  ACSH+G+V EG
Sbjct: 399 VISWSAMIAAYGYHGQGRKALDLFPMMLRSG-----ILPNKITLVSLLYACSHAGLVEEG 453

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
           +  F  M +DY +     HY CVVDLLGRAG++++A +LI  M  E D+ G W + LGAC
Sbjct: 454 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE-GLWGAFLGAC 512

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R H++V + E AA +L  L+P    HY+LLSNIY++A  W+     R  M +  ++K PG
Sbjct: 513 RTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 572

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
            +WIE  ++ H+F  GD +H +S++++  L++L  ++   GYVPDT+ VLH+V+EE K  
Sbjct: 573 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIG 632

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSEKLAIAFG++ TP  T IR+ KNLRVC DCH   K +S I  R II+RD  RFH
Sbjct: 633 ILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFH 692

Query: 870 HFKNGTCSCGDYW 882
           HFK G CSCGDYW
Sbjct: 693 HFKEGACSCGDYW 705



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 265/523 (50%), Gaps = 38/523 (7%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           A+   +     ++ E+ R   +PDN+  P V++A   +++L +G+ IH  V K+G  L  
Sbjct: 6   AKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDH 65

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
              A  LV+MY KC  ++ D   +FD++ E+D V+W  MI      GK + +L  F  M 
Sbjct: 66  FVCA-ALVDMYVKC-REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR 123

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGEWNTFIMNALMAMYAKLG 231
              V P    +V+V  AC+ L      R +   +     ++   +  +  A++ MYAK G
Sbjct: 124 EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL---DVILGTAMIDMYAKCG 180

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V+ A+ +F   E+++++SW+ ++++   + +  +A+   R M   G+ PD +++AS+L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           ACS L+ L  G+ IH    +  + +D+ FV +ALVDMY  CRE+E  R +FD + ++ + 
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDH-FVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W  MI GY +     E+L+LF KM E  G+ P+   M +VV AC +  A      I  +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
             +     D  +  A++DM+++ G +E ++ IFD ME ++ +SW+ MI  Y   GQ   A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHA- 528
           L                   DL   +LR    PN ITL+++L  C     + +G    + 
Sbjct: 419 L-------------------DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSL 459

Query: 529 ----YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
               Y++R     DV   + +VD+  + G L+ A ++ + M V
Sbjct: 460 MWEDYSVR----ADVKHYTCVVDLLGRAGRLDEALKLIESMTV 498



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 231/456 (50%), Gaps = 17/456 (3%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q R   +W   +   A   +  E+++ + +M    + PD  A   V+ A A +  +   +
Sbjct: 92  QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 151

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            I  ++ +  + L  V +   +++MY KCG  +    ++FDR+ EK+ +SW++MIA    
Sbjct: 152 IIDDYIQRKKFQLD-VILGTAMIDMYAKCGC-VESAREIFDRMEEKNVISWSAMIAAYGY 209

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G+   AL+ FRMML S + P   TL S+  ACS+L     L++GR +H    + G + +
Sbjct: 210 HGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLK---NLQMGRLIHHIVYKFGLDLD 266

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+  AL+ MY K   ++DA+ LF    +RDLV+W  ++   ++     E+++   +M  
Sbjct: 267 HFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMRE 326

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+ PD V++ +V+ AC+ L  +   + I  Y  R    +D   +G+A++DM+  C  VE
Sbjct: 327 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD-VILGTAMIDMHAKCGCVE 385

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +FD + +K +  W+AMI  YG +    +AL LF  M   +G+ PN  T+ S++ AC
Sbjct: 386 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR-SGILPNKITLVSLLYAC 444

Query: 397 VRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDT 452
             S A   +EG+   ++      +  D      ++D+  R GR++ +  + + M V +D 
Sbjct: 445 --SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
             W   +     C  H D ++  +   ++ E + +N
Sbjct: 503 GLWGAFLGA---CRTHKDVVLAEKAATSLLELQPQN 535


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 299/791 (37%), Positives = 456/791 (57%), Gaps = 35/791 (4%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           L KQ+HA +V  G    S+ ++  L+N Y   G D+      FD+I  KD  +WNSMI+ 
Sbjct: 58  LAKQLHALLVVSG-KTQSIFLSAKLINRYAFLG-DIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 155 LCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
             R G +  A++ F   L ++ ++   +T   V  AC NL        GR+VH   L++G
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD------GRKVHCLVLKLG 169

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            E + +I  + +  Y++ G V  A  LF +   RD+ +WN ++S    N K  EA+    
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M  + +  D V+I+S+LP C  L+ + +G  IH YA++  +  D  FV +AL++MY   
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD-LFVCNALINMYAKF 288

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            E+     +F+ +  + I  WN+++  + QN+    AL ++ KM  + G+ P+  T+ S+
Sbjct: 289 GELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSI-GVVPDLLTLVSL 347

Query: 393 VPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
                    F     IHG   +      D  + NA++DMY+++G I+ ++ +F+ + V+D
Sbjct: 348 ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKD 407

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            +SWN++ITGY+  G   +A+                +VY          PN  T +++L
Sbjct: 408 VISWNSLITGYSQNGLANEAI----------------DVYSSMRYYSGAVPNQGTWVSIL 451

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
                L AL +G + H   I+N L  D+ V + LVDMY KCG L  A  +F  +P ++ +
Sbjct: 452 TAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSV 511

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WN II  +G+HG G + ++L K M +EG     VKP+ +TF++L +ACSHSG+V EG  
Sbjct: 512 SWNAIISCHGLHGYGLKAVKLFKEMQSEG-----VKPDHITFVSLLSACSHSGLVDEGQW 566

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M++ YGI PS  HY C+VDL GRAG +E A+  +  MP   D    W +LLGACRI
Sbjct: 567 CFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPD-VSVWGALLGACRI 625

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+NVE+    + +L  +E +   +YVLLSNIY+    W+   +VR   ++ G++K PG S
Sbjct: 626 HENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWS 685

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            IE   +I  F  G+ +H + E+++  L NL+ +M+  GYVPD + VL +V ++EKE +L
Sbjct: 686 SIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENIL 745

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LA+AFGI++TPP TT+++ KNLRVC DCH ATKFISKI  REII+RD  RFHHF
Sbjct: 746 TSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHF 805

Query: 872 KNGTCSCGDYW 882
           K+G CSCGDYW
Sbjct: 806 KDGVCSCGDYW 816



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 197/409 (48%), Gaps = 20/409 (4%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  + EM    +  D+    ++L     + D+  G  IH + +K G     + V N L
Sbjct: 223 EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEF-DLFVCNAL 281

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +NMY K G ++     +F+++  +D VSWNS++A   +  K  +AL  +  M    V P 
Sbjct: 282 INMYAKFG-ELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPD 340

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAK 237
             TLVS+A   + L         R +HG   R   +  +  + NA++ MYAKLG +D A+
Sbjct: 341 LLTLVSLASVAAELG---NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR 397

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHL 296
            +F+    +D++SWN++++  SQN    EA+     M    G  P+  +  S+L A S L
Sbjct: 398 KVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQL 457

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  G + H   ++N +  D  FV + LVDMY  C ++     +F  +  +    WNA+
Sbjct: 458 GALKQGMKAHGQLIKNFLYFD-IFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI 516

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI-----HGH 411
           I+ +G + Y  +A+ LF +M+   G+ P+  T  S++ AC  S    + +         +
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQS-EGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETY 575

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
            I+  L         ++D++ R G +E +     +M VR  VS W  ++
Sbjct: 576 GIRPSLKH----YGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 6/262 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L +  ++ +   A+  Y +M    + PD     ++    A + +    + IH  V
Sbjct: 308 SWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFV 367

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +  + L  + + N +++MY K G  +    KVF+ +  KD +SWNS+I    + G  + 
Sbjct: 368 TRRCWFLHDIALGNAIIDMYAKLGF-IDSARKVFEGLPVKDVISWNSLITGYSQNGLANE 426

Query: 164 ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMN 221
           A++ +  M  YS   P+  T VS+  A S L     L+ G + HG  ++    ++ F+  
Sbjct: 427 AIDVYSSMRYYSGAVPNQGTWVSILTAHSQLG---ALKQGMKAHGQLIKNFLYFDIFVST 483

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+ MY K G++ DA +LF     +  VSWN I+S    +   L+AV   ++M   G+KP
Sbjct: 484 CLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKP 543

Query: 282 DGVSIASVLPACSHLEMLDTGK 303
           D ++  S+L ACSH  ++D G+
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQ 565


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 288/748 (38%), Positives = 444/748 (59%), Gaps = 30/748 (4%)

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD +  +  + WN ++  L + G +  ++  F+ M+ S VE  S+T   V+ + S+L   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 197 DGLRLGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            G   G Q+HG  L+   GE N+ + N+L+A Y K  RVD A+ +F    +RD++SWN+I
Sbjct: 61  HG---GEQLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 116

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           ++    N    + +    QM + GI+ D  +I SV   C+   ++  G+ +H+  ++   
Sbjct: 117 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             ++ F  + L+DMY  C +++  + VF  +SD+ +  + +MI GY +     EA+ LF 
Sbjct: 177 SREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 235

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +MEE  G+ P+  T+++V+  C R     + + +H    +  LG D +V NALMDMY++ 
Sbjct: 236 EMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 294

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G ++ ++ +F +M V+D +SWNT+I GY+      +AL L   +    EEK         
Sbjct: 295 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL---EEK--------- 342

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
               R  P+  T+  VLP C +LSA  KG+EIH Y +RN   +D  V ++LVDMYAKCG 
Sbjct: 343 ----RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 398

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L  A  +FD +  +++++W V+I  YGMHG G+E + L   M     R   ++ +E++F+
Sbjct: 399 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-----RQAGIEADEISFV 453

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L  ACSHSG+V EG   F  M+ +  IEP+ +HYAC+VD+L R G +  AY+ I  MP 
Sbjct: 454 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 513

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
             D A  W +LL  CRIH +V++ E  A+ +F LEP+   +YVL++NIY+ A+ W++   
Sbjct: 514 PPD-ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 572

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +RK++ + G+RK PGCSWIE    ++ F+AGD S+ ++E +  FL  +  RM +EGY P 
Sbjct: 573 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL 632

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T   L +  E EKE  LCGHSEKLA+A GI+++  G  IRV KNLRVC DCH+  KF+SK
Sbjct: 633 TKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSK 692

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  REI+LRD  RFH FK+G CSC  +W
Sbjct: 693 LTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/571 (30%), Positives = 288/571 (50%), Gaps = 37/571 (6%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           A+S  F  +I  + +M  S ++ D++ F  V K+ + ++ +  G+Q+H  ++K G+G  +
Sbjct: 20  AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 79

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
            +V N+LV  Y K    +    KVFD +TE+D +SWNS+I      G  +  L  F  ML
Sbjct: 80  -SVGNSLVAFYLK-NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 137

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV--GEWNTFIMNALMAMYAKL 230
            S +E    T+VSV   C++ SR   + LGR VH   ++      + F  N L+ MY+K 
Sbjct: 138 VSGIEIDLATIVSVFAGCAD-SRL--ISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKC 193

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +D AK +F+   DR +VS+ ++++  ++     EAV    +M   GI PD  ++ +VL
Sbjct: 194 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 253

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
             C+   +LD GK +H +   ND+  D  FV +AL+DMY  C  ++    VF  +  K I
Sbjct: 254 NCCARYRLLDEGKRVHEWIKENDLGFD-IFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WN +I GY +N Y  EAL LF  + E     P+  T++ V+PAC    AF     IHG
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           + ++ G   DR+V N+L+DMY++ G + ++  +FDD+  +D VSW  MI GY + G   +
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A+ L  +M+    E                  + I+ +++L  C     + +G       
Sbjct: 433 AIALFNQMRQAGIE-----------------ADEISFVSLLYACSHSGLVDEGWRFFN-I 474

Query: 531 IRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGEGQ 587
           +R+    +  V   + +VDM A+ G L  A R  + MP+  +   W  ++    +H + +
Sbjct: 475 MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 534

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
                L   VAE  +  E++P    +  L A
Sbjct: 535 -----LAEKVAE--KVFELEPENTGYYVLMA 558



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 158/323 (48%), Gaps = 16/323 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S+   +   AR     EA+  + EM    I PD +   AVL   A  + L  GK++H  +
Sbjct: 213 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 272

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +   G   + V+N L++MY KCGS M +   VF  +  KD +SWN++I    +    + 
Sbjct: 273 KENDLGF-DIFVSNALMDMYAKCGS-MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 330

Query: 164 ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
           AL  F ++L      P   T+  V  AC++LS  D    GR++HG  +R G + +  + N
Sbjct: 331 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK---GREIHGYIMRNGYFSDRHVAN 387

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK G +  A  LF     +DLVSW  +++    +    EA+    QM   GI+ 
Sbjct: 388 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 447

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRR 340
           D +S  S+L ACSH  ++D G       +R++  I+ +    A +VDM     ++    +
Sbjct: 448 DEISFVSLLYACSHSGLVDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDL---IK 503

Query: 341 VFDFISDKKI----ALWNAMITG 359
            + FI +  I     +W A++ G
Sbjct: 504 AYRFIENMPIPPDATIWGALLCG 526


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 303/844 (35%), Positives = 482/844 (57%), Gaps = 74/844 (8%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +P +L      +D+S G  IHA +++    L  + + N LVN+Y KC         V D 
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIR----LGLLGLRNRLVNLYSKCQCFRVARKLVIDS 108

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAF------------------------------- 168
            +E D VSW+++I+   + G+ + AL  +                               
Sbjct: 109 -SEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELG 167

Query: 169 ---------RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
                      M+ + + P+ F+L +V  AC+ L   +    G +VHG  +++G + + F
Sbjct: 168 KQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDEN---YGMKVHGYLIKLGYDSDPF 224

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
             NAL+ MYAK G  + A  +F      D+VSWN +++    ++K   A+  L +M    
Sbjct: 225 SANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR 284

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + P   +++S L AC+ + ++  G+++H+  ++ D+  D SFVG  L+DMY  C  ++  
Sbjct: 285 VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPD-SFVGVGLIDMYSKCGLLQDA 343

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R VFD +  K + +WN++I+GY    YD EA+ LF  M +  GL  N TT+S+++ +   
Sbjct: 344 RMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYK-EGLEFNQTTLSTILKSTAG 402

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S+A    E +H  +IK G   D YV N+L+D Y +   +E +  +F+     D V++ +M
Sbjct: 403 SQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSM 462

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           IT Y+  G   +AL +   MQ+ +                  KP++    ++   C  LS
Sbjct: 463 ITAYSQYGLGEEALKMYLRMQDRD-----------------IKPDAFIFSSLFNACANLS 505

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           A  +GK+IH + ++  L +DV  G++LV+MYAKCG ++ A  +F+ +  R +++W+ +I 
Sbjct: 506 AYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIG 565

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
               HG G++ L+L   M+  G     + PN +T +++ +AC+H+G+V+E    F  M+ 
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNG-----ILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            +GI P+ +HYAC+VD+LGR G++++A  L+  MP +   A  W +LLGA RIH+N+E+G
Sbjct: 621 LFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ-ASAAVWGALLGAARIHKNIELG 679

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             AA+ L  LEP+ +  ++LL+NIY+S  +WD    VR+ MK   V+KEPG SWIE  D+
Sbjct: 680 RHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDK 739

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           ++ F+ GD SH +S++++  L++L ER+   GYVP     LH+V + EKE LL  HSEKL
Sbjct: 740 VYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKL 799

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AFG++ TPPG  IRV KNLRVC DCH A KFISK+ SREII+RD+ RFHHF++G+CSC
Sbjct: 800 AVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSC 859

Query: 879 GDYW 882
           GDYW
Sbjct: 860 GDYW 863



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/541 (28%), Positives = 271/541 (50%), Gaps = 30/541 (5%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           EM  + I P+ F+   VL A AG++D + G ++H +++K GY  S    AN L++MY K 
Sbjct: 178 EMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD-SDPFSANALLDMYAKS 236

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G     +  VF  I + D VSWN++IA      K DLAL+    M    V PS FTL S 
Sbjct: 237 GCPEAAI-AVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSA 295

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ +     ++LGRQ+H   +++  E ++F+   L+ MY+K G + DA+ +F     
Sbjct: 296 LKACAAIGL---VKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPX 352

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +D++ WN+I+S  S     +EA+     M   G++ +  +++++L + +  +     +++
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQV 412

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H  ++++    D  +V ++L+D Y  C  +E   +VF+    + +  + +MIT Y Q   
Sbjct: 413 HTISIKSGYQYDG-YVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            EEAL ++++M++   + P+A   SS+  AC    A+   + IH H +K GL  D +  N
Sbjct: 472 GEEALKMYLRMQD-RDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +L++MY++ G I+ +  IF+++  R  VSW+ MI G    G    AL L  +M       
Sbjct: 531 SLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQM------- 583

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA- 544
                  L   +L   PN ITL++VL  C     + + +       +    T      A 
Sbjct: 584 -------LKNGIL---PNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYAC 633

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEG 600
           +VD+  + G L+ A  +   MP + +   W  ++ A  +H     G+   E+L  +  E 
Sbjct: 634 MVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEK 693

Query: 601 S 601
           S
Sbjct: 694 S 694



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 130/237 (54%), Gaps = 6/237 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  +  M +  ++ +      +LK+ AG Q     +Q+H   +K GY      VAN+L
Sbjct: 373 EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGY-VANSL 431

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ YGKC   + D  KVF+    +D V++ SMI    ++G  + AL+ +  M   +++P 
Sbjct: 432 LDSYGKC-CLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPD 490

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
           +F   S+  AC+NLS  +    G+Q+H + L+ G   + F  N+L+ MYAK G +DDA  
Sbjct: 491 AFIFSSLFNACANLSAYEQ---GKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           +F     R +VSW+ ++  L+Q+    +A+    QM   GI P+ +++ SVL AC+H
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNH 604


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 310/834 (37%), Positives = 475/834 (56%), Gaps = 47/834 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           AIL  +      + PD F  P  LK+  G      G+Q+HA   K G       V N+LV
Sbjct: 51  AILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHAVAAKLGLADGDPFVGNSLV 106

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY---SNVE 177
           +MYG+CG  + D  KVF+ +  ++ VSWN+++A +    +    LE FR  L        
Sbjct: 107 SMYGRCGR-VDDAEKVFEGMAGRNLVSWNALMAAVADPRR---GLELFRDCLEDLGGTAA 162

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAKLGRVDD 235
           P   TLV+V   C+ L+  +    GR VHG +++ G W+    + N L+ MYAK G + D
Sbjct: 163 PDEATLVTVLPMCAALAWPE---TGRAVHGLAVKSG-WDAAPRVSNVLVDMYAKCGEMAD 218

Query: 236 AKTLF---KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL--RGIKPDGVSIASVL 290
           A+  F        R++VSWN ++   ++N +   A   LR+M +  RG+  D +++ SVL
Sbjct: 219 AECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVL 278

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCREVECGRRVFDFISDK 348
           P CS L  L   +E+HA+ +R  + +    V +AL+  Y  C C    C  RVFD I  K
Sbjct: 279 PVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHAC--RVFDGICSK 336

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            ++ WNA+I  + QN     A+ LF +M    G  P+  ++ S++ AC   +     +  
Sbjct: 337 MVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAA 396

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG  ++ GL +D +++ +L+ +Y + GR  +++ +FD +E +D VSWNTMI GY+  G  
Sbjct: 397 HGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLP 456

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
           G++L L REMQ+ +                   P+ +   + L  C  L A+  GKE+H 
Sbjct: 457 GESLQLFREMQSKKGGH---------------WPSLLAATSALVACSELPAVRLGKEMHC 501

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           +A++  L  D  + S+++DMY+KCG ++ AR  FD +  ++ ++W V+I  Y ++G G+E
Sbjct: 502 FALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKE 561

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            + L   M  EG     ++P+  T++ L  AC H+GM+ +G+  F +M++   IE   +H
Sbjct: 562 AVGLYDKMGREG-----MEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEH 616

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YACV+ +L RAG+  DA  L+ +MP E D A   SS+L AC +H  VE+G+  A  L  L
Sbjct: 617 YACVIGMLSRAGRFADAVALMEVMPEEPD-AKILSSVLSACHMHGEVELGKKVADKLLEL 675

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP  A HYVL SN+Y+ ++ WD+   VRK +++ GV KEPGCSWI+   +++ F+AG+ S
Sbjct: 676 EPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENS 735

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
             +  ++     +L E++R  GY PDT+ +LH + EEEK   L  HSEK AIAFG+L T 
Sbjct: 736 LPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTA 795

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             T +RV KN+R+C DCH A K ISK+  REI++RD +RFHHF++G CSCGDYW
Sbjct: 796 GPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/813 (36%), Positives = 457/813 (56%), Gaps = 50/813 (6%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           + A+   ++L+  +Q+HA    +G  L ++ VAN L+  Y    + + D Y +FD +  +
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGM-LENIVVANKLIYFYSYYRA-LDDAYGLFDGMCVR 142

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           D VSW+ M+    + G +      FR ++     P ++TL  V  AC +L          
Sbjct: 143 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN-------- 194

Query: 204 QVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
                          +  AL+ MY K   ++DA+ LF   ++RDLV+W  ++   ++  K
Sbjct: 195 ---------------LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 239

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             E+++   +M   G+ PD V++ +V+ AC+ L  +   + I  Y  R    +D   +G+
Sbjct: 240 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD-VILGT 298

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           A++DMY  C  VE  R +FD + +K +  W+AMI  YG +    +AL LF +M   +G+ 
Sbjct: 299 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMMLSSGML 357

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P+  T++S++ AC+          +H  A   G+ ++  V N L+  YS    ++ +  +
Sbjct: 358 PDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGL 417

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL-------DET 496
           FD M VRD+VSW+ M+ G+   G + +     RE+        R + Y L       +  
Sbjct: 418 FDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGA---RPDNYTLPFCGNANESL 474

Query: 497 VLRPK-------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
           VL  K       P+ + ++TV+  C  L A+ K + I  Y  R     DV++G+A++DM+
Sbjct: 475 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 534

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCGC+  AR +FD M  +NVI+W+ +I AYG HG+G++ L+L   M+  G     + PN
Sbjct: 535 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG-----ILPN 589

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           ++T ++L  ACSH+G+V EG+  F  M +DY +     HY CVVDLLGRAG++++A +LI
Sbjct: 590 KITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 649

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
             M  E D+ G W + LGACR H++V + E AA +L  L+P    HY+LLSNIY++A  W
Sbjct: 650 ESMTVEKDE-GLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRW 708

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           +     R  M +  ++K PG +WIE  ++ H+F  GD +H +S++++  L++L  ++   
Sbjct: 709 EDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELV 768

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVPDT+ VLH+V+EE K  +L  HSEKLAIAFG++ TP  T IR+ KNLRVC DCH   
Sbjct: 769 GYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFC 828

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K +S I  R II+RD  RFHHFK G CSCGDYW
Sbjct: 829 KLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 253/568 (44%), Gaps = 87/568 (15%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +   A+   +     ++ E+ R   +PDN+  P V++A   +++L +
Sbjct: 138 GMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM 197

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
                                  LV+MY KC  ++ D   +FD++ E+D V+W  MI   
Sbjct: 198 A----------------------LVDMYVKC-REIEDARFLFDKMQERDLVTWTVMIGGY 234

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGE 214
              GK + +L  F  M    V P    +V+V  AC+ L      R +   +     ++  
Sbjct: 235 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL-- 292

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  +  A++ MYAK G V+ A+ +F   E+++++SW+ ++++   + +  +A+   R M
Sbjct: 293 -DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM 351

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G+ PD +++AS+L AC +   L   +++HA A  + +L  N  V + LV  Y   R 
Sbjct: 352 LSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGML-QNLIVANKLVHFYSYYRA 410

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQ---------------------NEYD------- 366
           ++    +FD +  +    W+ M+ G+ +                     + Y        
Sbjct: 411 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNA 470

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
            E+L+LF KM E  G+ P+   M +VV AC +  A      I  +  +     D  +  A
Sbjct: 471 NESLVLFDKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 529

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           ++DM+++ G +E ++ IFD ME ++ +SW+ MI  Y   GQ   AL              
Sbjct: 530 MIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL-------------- 575

Query: 487 RNNVYDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHA-----YAIRNMLATDV 539
                DL   +LR    PN ITL+++L  C     + +G    +     Y++R     DV
Sbjct: 576 -----DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVR----ADV 626

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPV 567
              + +VD+  + G L+ A ++ + M V
Sbjct: 627 KHYTCVVDLLGRAGRLDEALKLIESMTV 654


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/811 (36%), Positives = 462/811 (56%), Gaps = 34/811 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV--TVANTLVNMYGKCGSDMWDV 133
           D+ ++ AVL+  + ++ L  GK+ H  V     G   +   +   LV MY KCG D+ + 
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCG-DLENA 148

Query: 134 YKVFDRITEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            +VFD + +   V  W ++++   + G     +  FR M    V P ++T +S  L C  
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT-ISCVLKC-- 205

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           ++    +  G  VHG   ++G  +   + NALMA YAK  R  DA  +F     RD++SW
Sbjct: 206 IAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISW 265

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++S  + N  + +A+    +M L G + D  ++ SVLPAC+ L +L  G+ +H Y+++
Sbjct: 266 NSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVK 325

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
               I  + + + L+DMY NC +     ++F  +  K +  W AMIT Y +    ++   
Sbjct: 326 TG-FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAG 384

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M  + G  P+   ++S + A   +E     + +HG+AI+ G+ +   V NALM+MY
Sbjct: 385 LFQEMG-LEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMY 443

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G +E +K IFD +  +D +SWNT+I GY+      +A  L  EM             
Sbjct: 444 VKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM------------- 490

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                +L+ +PN++T+  +LP   +LS+L +G+E+HAYA+R     D  V +AL+DMY K
Sbjct: 491 -----LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L  ARR+FD +  +N+I+W +++  YGMHG G++ + L + M   G     + P+  
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSG-----IAPDAA 600

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           +F A+  ACSHSG+  EG   F  M+ ++ IEP   HY C+VDLL   G +++AY+ I+ 
Sbjct: 601 SFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDS 660

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP E D +  W SLL  CRIH+NV++ E  A+ +F LEP+   +YVLL+NIY+ A+ W+ 
Sbjct: 661 MPIEPDSS-IWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEA 719

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              ++ K+   G+R+  GCSWIE   ++H F+A + +H Q  ++  FL  +++RM++EG+
Sbjct: 720 VRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGH 779

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
            P     L   +       LCGHS KLA+AFG+LN   G  IRV KN RVC+ CH+A KF
Sbjct: 780 DPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKF 839

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISK+ SREIILRD  RFHHF+ G CSC  YW
Sbjct: 840 ISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 231/436 (52%), Gaps = 9/436 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A++   RE +L + +M    ++PD +    VLK +AG+  +  G+ +H  + 
Sbjct: 164 WTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLE 223

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S   V N L+  Y K      D   VFD +  +D +SWNSMI+     G +D A
Sbjct: 224 KLGFG-SQCAVGNALMAFYAKSNRTK-DAILVFDGMPHRDVISWNSMISGCTSNGLYDKA 281

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNAL 223
           +E F  M     E  S TL+SV  AC+ L     L LGR VHG S++ G  + T + N L
Sbjct: 282 IELFVRMWLEGEELDSATLLSVLPACAELHL---LFLGRVVHGYSVKTGFISQTSLANVL 338

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+          +F++   +++VSW  +++S ++   + +     ++M L G +PD 
Sbjct: 339 LDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDI 398

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            +I S L A +  E+L  GK +H YA+RN  +     V +AL++MY  C  +E  + +FD
Sbjct: 399 FAITSALHAFAGNELLKHGKSVHGYAIRNG-MEKVLAVTNALMEMYVKCGNMEEAKLIFD 457

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +  K +  WN +I GY +N    EA  LF +M  +  L PNA TM+ ++PA     +  
Sbjct: 458 GVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM--LLQLRPNAVTMTCILPAAASLSSLE 515

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               +H +A++ G   D +V NAL+DMY + G + +++ +FD +  ++ +SW  M+ GY 
Sbjct: 516 RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575

Query: 464 ICGQHGDALMLLREMQ 479
           + G+  DA+ L  +M+
Sbjct: 576 MHGRGRDAIALFEQMR 591



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 227/428 (53%), Gaps = 19/428 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  + +AI  ++ M     + D+    +VL A A +  L LG+ +H + 
Sbjct: 264 SWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYS 323

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+ +S  ++AN L++MY  C SD     K+F  + +K+ VSW +MI +  R G +D 
Sbjct: 324 VKTGF-ISQTSLANVLLDMYSNC-SDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDK 381

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
               F+ M      P  F + S   A    +  + L+ G+ VHG ++R G E    + NA
Sbjct: 382 VAGLFQEMGLEGTRPDIFAITS---ALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNA 438

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           LM MY K G +++AK +F     +D++SWNT++   S+N+   EA     +M L+ ++P+
Sbjct: 439 LMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPN 497

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++  +LPA + L  L+ G+E+HAYALR   L D+ FV +AL+DMY  C  +   RR+F
Sbjct: 498 AVTMTCILPAAASLSSLERGREMHAYALRRGYLEDD-FVANALIDMYVKCGALLLARRLF 556

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----VR 398
           D +S+K +  W  M+ GYG +    +A+ LF +M  V+G+ P+A + S+++ AC    +R
Sbjct: 557 DRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQM-RVSGIAPDAASFSAILYACSHSGLR 615

Query: 399 SEAFPDKEGIHG-HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWN 456
            E +   + +   H I+  L         ++D+    G ++ +    D M +  D+  W 
Sbjct: 616 DEGWRFFDAMRKEHKIEPRLKH----YTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWV 671

Query: 457 TMITGYTI 464
           +++ G  I
Sbjct: 672 SLLRGCRI 679


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 275/702 (39%), Positives = 420/702 (59%), Gaps = 47/702 (6%)

Query: 199 LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG------------------RVDDAKTLF 240
           LR GR++     +V     F+ N LM  YAK+G                  RV+ A+ LF
Sbjct: 152 LREGRRIFD---KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLF 208

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
               DRD++SWN+++S    N    + +    QM L GI  D  ++ SV+  CS+  ML 
Sbjct: 209 DELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLL 268

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G+ +H YA++     + + + + L+DMY     +    +VF+ + ++ +  W +MI GY
Sbjct: 269 LGRALHGYAIKASFGKELT-LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 327

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            +    + ++ LF +ME+  G+ P+  T+++++ AC  +    + + +H +  +  +  D
Sbjct: 328 AREGLSDMSVRLFHEMEK-EGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V NALMDMY++ G +  + ++F +M+V+D VSWNTMI GY+      +AL L  EMQ 
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ- 445

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                               KPNSIT+  +LP C +L+AL +G+EIH + +RN  + D  
Sbjct: 446 -----------------YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRH 488

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           V +ALVDMY KCG L  AR +FD++P +++++W V+I  YGMHG G E +     M    
Sbjct: 489 VANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM---- 544

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
            R   ++P+EV+FI++  ACSHSG++ EG   F  M+++  IEP  +HYAC+VDLL RAG
Sbjct: 545 -RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAG 603

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            +  AY+ I MMP E D A  W +LL  CRI+ +V++ E  A+++F LEP+   +YVLL+
Sbjct: 604 NLSKAYKFIKMMPIEPD-ATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLA 662

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           NIY+ A+ W++   +R+++   G+RK PGCSWIE   ++H F+ GD SH  + ++   L+
Sbjct: 663 NIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLK 722

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
               RM++EG+ P     L   ++ EKE  LCGHSEK+A+AFGIL+ PPG T+RV KNLR
Sbjct: 723 KTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLR 782

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH+  KF+SK+  R+IILRD  RFHHFK+G+CSC  +W
Sbjct: 783 VCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 180/670 (26%), Positives = 301/670 (44%), Gaps = 112/670 (16%)

Query: 15  PLSSLQTHQPPATTATSLPLPGSQTRCK--ESWIESLRSEARSNQFREAILSYIEMTRSD 72
           PL S   +   AT  TS+ LP     CK  +  IE  R     N  R      +E+    
Sbjct: 41  PLVSSNLYHSCATIGTSV-LPSETIDCKITDYNIEICRFCELGNLRRA-----MELINQS 94

Query: 73  IQPDN--FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-- 128
            +PD     + +VL+  A ++ +  G++IH+ +      +  V + + LV MY  CG   
Sbjct: 95  PKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV-LGSKLVFMYVTCGDLR 153

Query: 129 --------------DMWDVY--------------------------------KVFDRITE 142
                          +W++                                 K+FD + +
Sbjct: 154 EGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGD 213

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D +SWNSMI+     G  +  L+ F  ML   +     T+VSV   CSN      L LG
Sbjct: 214 RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM---LLLG 270

Query: 203 RQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R +HG +++        + N L+ MY+K G ++ A  +F++  +R +VSW ++++  ++ 
Sbjct: 271 RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE 330

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                +V    +M   GI PD  +I ++L AC+   +L+ GK++H Y   N +  D  FV
Sbjct: 331 GLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD-LFV 389

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +AL+DMY  C  +     VF  +  K I  WN MI GY +N    EAL LF++M+  + 
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK 449

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
             PN+ TM+ ++PAC    A    + IHGH ++ G   DR+V NAL+DMY + G + +++
Sbjct: 450 --PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLAR 507

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD +  +D VSW  MI GY + G   +A+    EM+N   E                 
Sbjct: 508 LLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE----------------- 550

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCL 555
           P+ ++ +++L  C     L +G     +   NM+  +  +       + +VD+ A+ G L
Sbjct: 551 PDEVSFISILYACSHSGLLDEG-----WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 605

Query: 556 NFARRVFDLMPVR-NVITWNVIIMAYGMHGE-------GQEVLE----------LLKNMV 597
           + A +   +MP+  +   W  ++    ++ +        + V E          LL N+ 
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIY 665

Query: 598 AEGSRGGEVK 607
           AE  +  EVK
Sbjct: 666 AEAEKWEEVK 675



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 51/236 (21%)

Query: 500 PKPNS--ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           PKP+    T  +VL  C  L ++  G+ IH+    N +  D V+GS LV MY  CG L  
Sbjct: 95  PKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLRE 154

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE------------ 605
            RR+FD +    V  WN+++  Y   G  +E L L K M   G R  E            
Sbjct: 155 GRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDR 214

Query: 606 --------------------------------VKPNEVTFIALFAACSHSGMVSEGMDLF 633
                                           +  +  T +++ A CS++GM+  G  L 
Sbjct: 215 DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALH 274

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            Y +K  +G E + ++  C++D+  ++G +  A Q+   M        +W+S++  
Sbjct: 275 GYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMGER--SVVSWTSMIAG 326


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 305/844 (36%), Positives = 478/844 (56%), Gaps = 42/844 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L  E  + +  +AI +   M      PD   +   LK     +   +G  +H  + +   
Sbjct: 38  LIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDL 97

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI--TEKDQVSWNSMIATLCRFGKWDLALE 166
            L SVT+ N+L+++Y KCG   W+      R+  + +D +SW++M++          AL 
Sbjct: 98  QLDSVTL-NSLISLYSKCGQ--WEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALL 154

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALM 224
            F  M+ +   P+ +   +   ACS     + + +G  + G  ++ G  + +  +   L+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACST---AEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211

Query: 225 AMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            M+ K GR D   A  +F+   +R+ V+W  +++ L Q     EA+     M   G +PD
Sbjct: 212 DMFVK-GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPD 270

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGR 339
             +++ V+ AC+++E+L  G+++H+ A+R+ + +D   VG  L++MY  C     +   R
Sbjct: 271 RFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC-VGCCLINMYAKCSVDGSMCAAR 329

Query: 340 RVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           ++FD I D  +  W AMITGY Q   YDEEAL LF  M  +  + PN  T SS + AC  
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACAN 388

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A    E +  HA+KLG      V N+L+ MY+R GRI+ ++  FD +  ++ +S+NT+
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I  Y       +AL L  E+++                      ++ T  ++L G  ++ 
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQG-----------------MGASAFTFASLLSGAASIG 491

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            + KG++IHA  I++ L  +  V +AL+ MY++CG +  A +VF+ M  RNVI+W  II 
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            +  HG   + LEL   M+ EG     V+PNEVT+IA+ +ACSH G+V+EG   F  M  
Sbjct: 552 GFAKHGFATQALELFHKMLEEG-----VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYT 606

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           ++G+ P  +HYAC+VD+LGR+G + +A Q IN MP + D A  W + LGACR+H N+E+G
Sbjct: 607 EHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKAD-ALVWRTFLGACRVHGNLELG 665

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           + AA+ +   EP   + Y+LLSN+Y+S   WD+  ++RK MKE  + KE GCSW+E  ++
Sbjct: 666 KHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENK 725

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +HKF  GD SH ++ +++  L+NLS +++K GYVP+   VLH+V EE+KE LL  HSEK+
Sbjct: 726 VHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKI 785

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AFG+++T     IRV KNLR+C DCH A K+IS    REII+RD  RFHH K+G CSC
Sbjct: 786 AVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSC 845

Query: 879 GDYW 882
            +YW
Sbjct: 846 NEYW 849



 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 284/563 (50%), Gaps = 29/563 (5%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           ATS+      +R   SW   +   A +N    A+L++++M  +   P+ + F A  +A +
Sbjct: 120 ATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
             + +S+G  I   V+K GY  S V V   L++M+ K   D+   +KVF+++ E++ V+W
Sbjct: 180 TAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTW 239

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
             MI  L +FG    A++ F  M++S  EP  FTL  V  AC+N+   + L LG+Q+H  
Sbjct: 240 TLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM---ELLLLGQQLHSQ 296

Query: 209 SLRVG-EWNTFIMNALMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           ++R G   +  +   L+ MYAK    G +  A+ +F    D ++ SW  +++   Q   +
Sbjct: 297 AIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGY 356

Query: 265 -LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EA+   R M L  + P+  + +S L AC++L  L  G+++  +A++      N  V +
Sbjct: 357 DEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC-VAN 415

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           +L+ MY     ++  R+ FD + +K +  +N +I  Y +N   EEAL LF ++E+  G+ 
Sbjct: 416 SLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIED-QGMG 474

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
            +A T +S++            E IH   IK GL  ++ V NAL+ MYSR G IE +  +
Sbjct: 475 ASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQV 534

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+DME R+ +SW ++ITG+    +HG A   L     M EE  R              PN
Sbjct: 535 FEDMEDRNVISWTSIITGF---AKHGFATQALELFHKMLEEGVR--------------PN 577

Query: 504 SITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            +T + VL  C  +  + +G K   +    + +   +   + +VD+  + G L+ A +  
Sbjct: 578 EVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFI 637

Query: 563 DLMPVR-NVITWNVIIMAYGMHG 584
           + MP + + + W   + A  +HG
Sbjct: 638 NSMPYKADALVWRTFLGACRVHG 660


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/840 (34%), Positives = 469/840 (55%), Gaps = 31/840 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A+S   +EA   Y +M  + + P  +   +VL A    +  + G+ IHA V
Sbjct: 111 SWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQV 170

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  +  S   V N L+ +Y   GS      +VF  +   D+V++N++I+   + G  + 
Sbjct: 171 YKQAF-CSETFVGNALIALYLGFGSFKL-AERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F  M  S + P   T+ S+  AC+++     L+ G+Q+H   L+ G  ++     +
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVG---DLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++ A  +F   +  ++V WN ++ +  Q     ++     QM   GI P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C+    ++ G++IH+ +++N    D  +V   L+DMY     ++  R++ 
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD-MYVSGVLIDMYSKYGCLDKARKIL 404

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  + +  W +MI GY Q+++ EEAL  F +M++  G+WP+   ++S   AC   +A 
Sbjct: 405 EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD-CGVWPDNIGLASAASACAGIKAM 463

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH      G   D  + N L+++Y+R GR E + ++F ++E +D ++WN +I+G+
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGF 523

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                +  ALM+  +M                      K N  T ++ +     L+ + +
Sbjct: 524 GQSRLYKQALMVFMKMGQAG-----------------AKYNVFTFISAISALANLADIKQ 566

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK++H  A++    ++  V +AL+ +Y KCG +  A+ +F  M +RN ++WN II +   
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M + YG+
Sbjct: 627 HGRGLEALDLFDQMKQEG-----LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGL 681

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACVVD+LGRAG+++ A + ++ MP   + A  W +LL AC++H+N+EIGE+AA
Sbjct: 682 NPIPDHYACVVDILGRAGQLDRARRFVDEMPITAN-AMIWRTLLSACKVHKNIEIGELAA 740

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           ++L  LEP  ++ YVLLSN Y+    W     VRK MK+ G+RKEPG SWIE  + +H F
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAF 800

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  S+Q++ FL  L++R+ K GY  +   + H   +E+K+     HSEKLA+AF
Sbjct: 801 FVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAF 860

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G++  PP   +RV KNLRVC+DCH   K  S++  REI+LRDV RFHHF +G+CSCGDYW
Sbjct: 861 GLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 298/602 (49%), Gaps = 45/602 (7%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IHA  V  G G   + + N L+++Y K G  +W   +VF  ++ +D VSW +M++   +
Sbjct: 64  EIHATSVVRGLGADRL-IGNLLIDLYAKNGL-VWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 158 FGKWDLALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
            G   L  EAFR+   M ++ V P+ + L SV  AC   ++      GR +H    +   
Sbjct: 122 SG---LGKEAFRLYSQMHWTAVIPTPYVLSSVLSAC---TKGKLFAQGRMIHAQVYKQAF 175

Query: 215 WN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            + TF+ NAL+A+Y   G    A+ +F      D V++NT++S  +Q      A+    +
Sbjct: 176 CSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDE 235

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L G++PD V++AS+L AC+ +  L  GK++H+Y L+  +  D    GS L+D+Y  C 
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCG 294

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           ++E    +F+      + LWN M+  YGQ     ++  +F +M +  G+ PN  T   ++
Sbjct: 295 DIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM-QATGIHPNQFTYPCIL 353

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
             C  +      E IH  +IK G   D YV   L+DMYS+ G ++ ++ I + +E RD V
Sbjct: 354 RTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413

Query: 454 SWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           SW +MI GY    QH    +AL   +EMQ+         V+          P++I L + 
Sbjct: 414 SWTSMIAGYV---QHDFCEEALATFKEMQDC-------GVW----------PDNIGLASA 453

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
              C  + A+ +G +IHA    +  A D+ + + LV++YA+CG    A  +F  +  ++ 
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDE 513

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ITWN +I  +G     ++ L +   M   G+     K N  TFI+  +A ++   + +G 
Sbjct: 514 ITWNGLISGFGQSRLYKQALMVFMKMGQAGA-----KYNVFTFISAISALANLADIKQGK 568

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            +  +     G     +    ++ L G+ G +EDA  + + M        +W++++ +C 
Sbjct: 569 QVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEM--SLRNEVSWNTIITSCS 625

Query: 691 IH 692
            H
Sbjct: 626 QH 627



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 252/529 (47%), Gaps = 41/529 (7%)

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC     R  L L  ++H  S+  G   +  I N L+ +YAK G V  A+ +FK    RD
Sbjct: 51  ACRGRGNRWPLVL--EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSW  ++S  +Q+    EA     QM    + P    ++SVL AC+  ++   G+ IHA
Sbjct: 109 HVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHA 168

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVF-DFISDKKIALWNAMITGYGQNEYD 366
              +       +FVG+AL+ +Y      +   RVF D +   ++  +N +I+G+ Q  + 
Sbjct: 169 QVYKQ-AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVT-FNTLISGHAQCGHG 226

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           E AL +F +M +++GL P+  T++S++ AC         + +H + +K G+  D   + +
Sbjct: 227 ECALQIFDEM-QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+D+Y + G IE +  IF+  +  + V WN M+  Y        +  +  +MQ       
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ------- 338

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                          PN  T   +L  C     +  G++IH+ +I+N   +D+ V   L+
Sbjct: 339 ----------ATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLI 388

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMY+K GCL+ AR++ +++  R+V++W  +I  Y  H   +E L   K M   G     V
Sbjct: 389 DMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCG-----V 443

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
            P+ +   +  +AC+    + +G+ +  ++    G       +  +V+L  R G+ E+A+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAF 502

Query: 667 QLINMMPPEFDKAGAWSSLL---GACRIHQN-----VEIGEIAAQ-NLF 706
            L   +  E      W+ L+   G  R+++      +++G+  A+ N+F
Sbjct: 503 SLFREI--EHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVF 549


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 315/810 (38%), Positives = 455/810 (56%), Gaps = 47/810 (5%)

Query: 90  IQDLSL--GKQIHAHVVKYGYGLSSVTVAN------TLVNMYGKCGSDMWDVYKVFDRIT 141
           IQ  SL  GK IH H++K  +      + N       LV++Y  C S++     VFD++ 
Sbjct: 20  IQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIAC-SELKIARHVFDKMP 78

Query: 142 E--KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
              K+ V WN +I      G ++ A++ +  ML   + P+ FT   V  ACS L      
Sbjct: 79  HRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASE- 137

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             GR++H +  R+  E N ++  AL+  YAK G +DDAK +F     RD+V+WN+++S  
Sbjct: 138 --GREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGF 195

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S ++   + V  L       + P+  +I  VLPA + +  L  GKEIH + +R    + +
Sbjct: 196 SLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG-FVGD 254

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKM- 376
             VG+ ++D+Y  C+ ++  RR+FD +   K    W+AM+  Y   ++  EAL LF ++ 
Sbjct: 255 VVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLL 314

Query: 377 ---EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
              ++V  L  +A T+++V+  C           +H +AIK G   D  V N L+ MY++
Sbjct: 315 MLKDDVIVL--SAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAK 372

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G I  +   F++M++RD VS+  +I+GY   G   + L +  EMQ              
Sbjct: 373 CGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQ-------------- 418

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
              +    P   TL +VLP C  L+ L  G   H YAI      D ++ +AL+DMYAKCG
Sbjct: 419 ---LSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCG 475

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            ++ AR+VFD M  R +++WN +I+AYG+HG G E L L  NM +EG     +KP++VTF
Sbjct: 476 KIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEG-----LKPDDVTF 530

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           I L +ACSHSG+V+EG   F  M  D+GI P  +HYAC+VDLL RAG  ++ +  I  MP
Sbjct: 531 ICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMP 590

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            E D    W +LL ACR+++NVE+GE  ++ +  L P+   ++VLLSN+YS+   WD A 
Sbjct: 591 LEPD-VRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAA 649

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYV 792
            VR   KE G  K PGCSWIE    +H FL G   SH Q  Q+   L+ L   M++ GY 
Sbjct: 650 QVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQ 709

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
            ++S V  +V EEEKE +L  HSEKLAIAFGIL+  P   I V KNLRVC DCH A KFI
Sbjct: 710 AESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFI 769

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           S +  R+I +RD  RFHHFK+G C+CGD+W
Sbjct: 770 SLVTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 283/549 (51%), Gaps = 45/549 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ A +  + EAI  Y +M    I P+ F FP VLKA + +++ S G++IH  + 
Sbjct: 87  WNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIK 146

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF-GKWDL 163
           +     S+V V+  LV+ Y KCG  + D  +VFD++ ++D V+WNSMI+      G +D 
Sbjct: 147 RLRLE-SNVYVSTALVDFYAKCGC-LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYD- 203

Query: 164 ALEAFRMM--LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             E  R++  + ++V P+S T+V V  A   +++ + LR G+++HG  +R G   +  + 
Sbjct: 204 --EVARLLVQMQNDVSPNSSTIVGVLPA---VAQVNSLRHGKEIHGFCVRRGFVGDVVVG 258

Query: 221 NALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRG 278
             ++ +Y K   +D A+ +F      ++ V+W+ +V +    D   EA+ +F + + L+ 
Sbjct: 259 TGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKD 318

Query: 279 --IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             I    V++A+V+  C++L  L TG  +H YA+++  ++D   VG+ L+ MY  C  + 
Sbjct: 319 DVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLD-LMVGNTLLSMYAKCGIIN 377

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              R F+ +  +    + A+I+GY QN   EE L +F++M +++G+ P   T++SV+PAC
Sbjct: 378 GAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM-QLSGINPEKATLASVLPAC 436

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                       H +AI  G   D  + NAL+DMY++ G+I+ ++ +FD M  R  VSWN
Sbjct: 437 AHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWN 496

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           TMI  Y   G HG  L  L    NM+ E                KP+ +T + ++  C  
Sbjct: 497 TMIIAY---GIHGIGLEALLLFDNMQSEG--------------LKPDDVTFICLISACSH 539

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-NV 570
              +A+GK    Y    M     ++      + +VD+ ++ G         + MP+  +V
Sbjct: 540 SGLVAEGK----YWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDV 595

Query: 571 ITWNVIIMA 579
             W  ++ A
Sbjct: 596 RVWGALLSA 604


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 300/811 (36%), Positives = 463/811 (57%), Gaps = 30/811 (3%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
            +PD   F A+L+  +  +++  G+++H HV   G+  +++ V   L+ MY +CGS + +
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNL-VCGHLIQMYAQCGS-VPE 58

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             +VF+ +  KD  +W  MI   C+ G +D AL  F  M   +V P+  T V++  AC++
Sbjct: 59  AQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAS 118

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               + L+ G ++HG  L+ G E + F+  AL+ MY K G V  A   FK  E RD+VSW
Sbjct: 119 T---ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSW 175

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             ++++  Q+D+F  A    R+M L G+ P+ +++ +V  A      L  GK I++    
Sbjct: 176 TAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSS 235

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             +  D   + SA+ +M+ N   +   RR+F+ + D+ +  WN +IT Y QNE   EA+ 
Sbjct: 236 RVMESDVRVMNSAM-NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVR 294

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF ++++  G+  N  T   ++       +    + IH    + G  RD  V  ALM +Y
Sbjct: 295 LFGRLQQ-DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLY 353

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            R      +  IF DM  +D ++W  M   Y   G   +AL L +EMQ +E  +      
Sbjct: 354 GRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRR------ 406

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                     P S TL+ VL  C  L+AL KG++IH++ I N    ++VV +AL++MY K
Sbjct: 407 ----------PTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGK 456

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG +  AR VF+ M  R+++ WN ++ AY  HG   E L+L   M  +G      K + V
Sbjct: 457 CGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGE-----KADAV 511

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           +F+++ +A SHSG V++G   F  M  D+ I P+P+ Y CVVDLLGRAG++++A  ++  
Sbjct: 512 SFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLK 571

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           +         W +LLGACR H   +  + AA+ +   +P  +  YV+LSN+Y++A  WD 
Sbjct: 572 LSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDG 631

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              +RK M+  GV+KEPG S IE  + +H+FL GD SH +   ++  L+ L+  MR  GY
Sbjct: 632 VNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGY 691

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           +PDT  +LH+V +E KE +L  HSE+LAIAFG+++TPPGT +RV KNLRVC+DCH ATK+
Sbjct: 692 IPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKY 751

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISK+  REI++RD  RFH+FK+G CSC DYW
Sbjct: 752 ISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 219/439 (49%), Gaps = 12/439 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +   +  A+  + +M   D+ P    + A+L A A  + L  G +IH  +
Sbjct: 73  AWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQI 132

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++ G+    V V   L+NMY KCGS    WD +K   R+  +D VSW +MIA   +  ++
Sbjct: 133 LQQGFE-GDVFVGTALINMYNKCGSVRGAWDSFK---RLEHRDVVSWTAMIAACVQHDQF 188

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRVGEWNTFIM 220
            LA   +R M    V P+  TL +V  A  +      L  G+ ++   S RV E +  +M
Sbjct: 189 ALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHY---LSEGKFIYSLVSSRVMESDVRVM 245

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N+ M M+   G + DA+ LF+   DRD+V+WN +++   QN+ F EAV    ++   GIK
Sbjct: 246 NSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIK 305

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            + ++   +L   + L  L  GK IH   ++      +  V +AL+ +Y  C       +
Sbjct: 306 ANDITFVLMLNVYTSLTSLAKGKVIHEL-VKEAGYDRDVVVATALMSLYGRCEAPGQAWK 364

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  +  K +  W  M   Y QN + +EAL LF +M ++ G  P + T+ +V+  C    
Sbjct: 365 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM-QLEGRRPTSATLVAVLDTCAHLA 423

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A      IH H I+ G   +  V+ AL++MY + G++  ++++F+ M  RD + WN+M+ 
Sbjct: 424 ALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLG 483

Query: 461 GYTICGQHGDALMLLREMQ 479
            Y   G + + L L  +MQ
Sbjct: 484 AYAQHGYYDETLQLFNQMQ 502


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 306/813 (37%), Positives = 462/813 (56%), Gaps = 43/813 (5%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+      +L LGK  HA +V  G       ++N L+ MY KCGS +    +VFD   E
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHF-LSNNLLTMYSKCGS-LSSARQVFDTTPE 140

Query: 143 KDQVSWNSMIATLCRF-----GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           +D V+WN+++           G     L  FR++  S    +  TL  V   C N     
Sbjct: 141 RDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLN---SG 197

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L     VHG ++++G EW+ F+  AL+ +Y+K GR+ DA+ LF    +RD+V WN ++ 
Sbjct: 198 CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLK 257

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC--SHLEMLDTGKEIHAYALRNDI 314
              Q     EA     +    G++PD  S+  +L  C  +  + L+ GK++H  A+++ +
Sbjct: 258 GYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGL 317

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             D S V ++LV+MY         R VF+ +    +  WN+MI+   Q+  +EE++ LFI
Sbjct: 318 DSDVS-VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFI 376

Query: 375 KMEEVAGLWPNATTMSSVV-----PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
            +    GL P+  T++S+       AC         + IH HAIK G   D +V + ++D
Sbjct: 377 DLLH-EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 435

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY + G +  +  +F+ +   D V+W +MI+G   C  +G+    LR    M +      
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISG---CVDNGNEDQALRIYHRMRQS----- 487

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                    R  P+  T  T++     ++AL +G+++HA  I+    +D  VG++LVDMY
Sbjct: 488 ---------RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 538

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCG +  A R+F  M VRN+  WN +++    HG  +E + L K+M + G     ++P+
Sbjct: 539 AKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG-----IEPD 593

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            V+FI + +ACSH+G+ SE  +  + M +DYGIEP  +HY+C+VD LGRAG V++A ++I
Sbjct: 594 RVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVI 653

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
             MP +   A    +LLGACRI  +VE G+  A  LF LEP  ++ YVLLSNIY++A  W
Sbjct: 654 ETMPFK-ASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 712

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           D   D RK MK   V+K+PG SWI+  + +H F+  D SH Q++ ++  +E + + +R++
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED 772

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVPDT  VL +V +EEKE  L  HSEKLAIA+G+++TP  TTIRV KNLRVC DCH A 
Sbjct: 773 GYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAI 832

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K+ISK+  REI+LRD  RFHHF++G CSCGDYW
Sbjct: 833 KYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 221/424 (52%), Gaps = 24/424 (5%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           +EA   + E  RS ++PD F+   +L     AG  DL LGKQ+H   VK G   S V+VA
Sbjct: 266 KEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD-SDVSVA 324

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+LVNMY K G   +   +VF+ +   D +SWNSMI++  +    + ++  F  +L+  +
Sbjct: 325 NSLVNMYSKMGCAYF-AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383

Query: 177 EPSSFTLVSVAL-----ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
           +P  FTL S+ L     AC  L   D    G+Q+H ++++ G + +  + + ++ MY K 
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQ---GKQIHAHAIKAGFDSDLHVNSGILDMYIKC 440

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G + +A  +F      D V+W +++S    N    +A+    +M    + PD  + A+++
Sbjct: 441 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            A S +  L+ G+++HA  ++ D + D  FVG++LVDMY  C  +E   R+F  ++ + I
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 559

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----VRSEAFPDKE 406
           ALWNAM+ G  Q+   EEA+ LF  M+   G+ P+  +   ++ AC    + SEA+   E
Sbjct: 560 ALWNAMLVGLAQHGNAEEAVNLFKSMKS-HGIEPDRVSFIGILSACSHAGLTSEAY---E 615

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H      G+  +    + L+D   R G ++ +  + + M  + + S N  + G   C 
Sbjct: 616 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG--ACR 673

Query: 467 QHGD 470
             GD
Sbjct: 674 IQGD 677



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 13/332 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG-----IQDLSLGKQ 98
           SW   + S A+S+   E++  +I++    ++PD+F   ++  A A      +  L  GKQ
Sbjct: 354 SWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQ 413

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IHAH +K G+  S + V + +++MY KCG DM +   VF+ I+  D V+W SMI+     
Sbjct: 414 IHAHAIKAGFD-SDLHVNSGILDMYIKCG-DMVNAGIVFNYISAPDDVAWTSMISGCVDN 471

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G  D AL  +  M  S V P  +T  ++  A S ++    L  GRQ+H N +++    + 
Sbjct: 472 GNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT---ALEQGRQLHANVIKLDCVSDP 528

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+  +L+ MYAK G ++DA  LFK    R++  WN ++  L+Q+    EAV   + M   
Sbjct: 529 FVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 588

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVE 336
           GI+PD VS   +L ACSH  +     E + +++ ND  I+      S LVD       V+
Sbjct: 589 GIEPDRVSFIGILSACSHAGLTSEAYE-YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 647

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
              +V + +  K  A  N  + G  + + D E
Sbjct: 648 EADKVIETMPFKASASINRALLGACRIQGDVE 679


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 312/835 (37%), Positives = 479/835 (57%), Gaps = 41/835 (4%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R++Q +EA+  ++ + RS    D  +   VLK    + D  +GKQ+H   +K G+ +  
Sbjct: 68  SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGF-VED 126

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+V  +LV+MY K  S + D  +VFD +  K+ VSW S++A   + G  + AL+ F  M 
Sbjct: 127 VSVGTSLVDMYMKTES-VEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLG 231
              ++P+ FT  +V      L+    +  G QVH   ++ G  +T F+ N+++ MY+K  
Sbjct: 186 LEGIKPNPFTFAAV---LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSL 242

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V DAK +F S E+R+ VSWN++++    N   LEA     +M L G+K      A+V+ 
Sbjct: 243 MVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIK 302

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD-KKI 350
            C++++ +   K++H   ++N    D + + +AL+  Y  C E++   ++F  +   + +
Sbjct: 303 LCANIKEMSFAKQLHCQVIKNGSDFDLN-IKTALMVAYSKCSEIDDAFKLFCMMHGVQNV 361

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W A+I+GY QN   + A+ LF +M    G+ PN  T S+++ A     A      IH 
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRR-EGVRPNHFTYSTILTA----NAAVSPSQIHA 416

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K        V  AL D YS++G    +  IF+ ++ +D V+W+ M++GY   G    
Sbjct: 417 LVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEG 476

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAY 529
           A+ +  ++     E                 PN  T  +VL  C A +A + +GK+ H+ 
Sbjct: 477 AVKIFLQLAKEGVE-----------------PNEFTFSSVLNACAAPTASVEQGKQFHSC 519

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           +I++  +  + V SALV MYAK G +  A  VF     R++++WN +I  Y  HG G++ 
Sbjct: 520 SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKS 579

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L++ + M     R   ++ + +TFI + +AC+H+G+V+EG   F  M  DY I P+ +HY
Sbjct: 580 LKIFEEM-----RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY 634

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGACRIHQNVEIGEIAAQNLFL 707
           +C+VDL  RAG +E A  LIN MP     AGA  W +LL ACR+H NV++GE+AA+ L  
Sbjct: 635 SCMVDLYSRAGMLEKAMDLINKMPF---PAGATIWRTLLAACRVHLNVQLGELAAEKLIS 691

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+P  ++ YVLLSNIY++A  W +   VRK M    V+KE G SWIE  ++   F+AGD 
Sbjct: 692 LQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDL 751

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH QS++++  LE LS R++  GY PDT  VLH+V EE KE +L  HSE+LAIAFG++ T
Sbjct: 752 SHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIAT 811

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPGT I++ KNLRVC DCH   K ISKIE R+I++RD  RFHHFK G+CSCGDYW
Sbjct: 812 PPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 270/547 (49%), Gaps = 37/547 (6%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  SL +  R N   E  L  + +M    I+P+ F F AVL  +A    +  G Q+H  
Sbjct: 160 SWT-SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G   S++ V N++VNMY K    + D   VFD +  ++ VSWNSMIA     G   
Sbjct: 219 VIKSGLD-STIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDL 276

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A E F  M    V+ +     +V   C+N+     +   +Q+H   ++ G +++  I  
Sbjct: 277 EAFELFYRMRLEGVKLTQTIFATVIKLCANIKE---MSFAKQLHCQVIKNGSDFDLNIKT 333

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           ALM  Y+K   +DDA  LF      +++VSW  I+S   QN +   A+    QM   G++
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVR 393

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGR 339
           P+  + +++L A + +    +  +IHA  ++ +   +NS  VG+AL D Y    +     
Sbjct: 394 PNHFTYSTILTANAAV----SPSQIHALVVKTN--YENSPSVGTALSDSYSKIGDANEAA 447

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           ++F+ I +K I  W+AM++GY Q    E A+ +F+++ +  G+ PN  T SSV+ AC   
Sbjct: 448 KIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAK-EGVEPNEFTFSSVLNACAAP 506

Query: 400 EAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            A  ++ +  H  +IK G      V +AL+ MY++ G IE +  +F     RD VSWN+M
Sbjct: 507 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSM 566

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+GY    QHG      + ++  EE +++N   +LD          IT + V+  C    
Sbjct: 567 ISGY---AQHGCG---KKSLKIFEEMRSKN--LELD---------GITFIGVISACTHAG 609

Query: 519 ALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVI 576
            + +G+      +++  +   +   S +VD+Y++ G L  A  + + MP       W  +
Sbjct: 610 LVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 669

Query: 577 IMAYGMH 583
           + A  +H
Sbjct: 670 LAACRVH 676



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 220/452 (48%), Gaps = 32/452 (7%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           ++ LF     + L   N ++   S+ND+  EA+     +   G   DG S++ VL  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L     GK++H   ++   + D S VG++LVDMY     VE G RVFD +  K +  W +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVS-VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           ++ GY QN  +E+AL LF +M ++ G+ PN  T ++V+       A      +H   IK 
Sbjct: 164 LLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL    +V N++++MYS+   +  +K +FD ME R+ VSWN+MI G+   G   +A  L 
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M+ +E  K       L +T+           TV+  C  +  ++  K++H   I+N  
Sbjct: 283 YRMR-LEGVK-------LTQTI---------FATVIKLCANIKEMSFAKQLHCQVIKNGS 325

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLK 594
             D+ + +AL+  Y+KC  ++ A ++F +M  V+NV++W  II  Y  +G     + L  
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  EG     V+PN  T+  +  A   +  VS        +K +Y  E SP     + D
Sbjct: 386 QMRREG-----VRPNHFTYSTILTA---NAAVSPSQIHALVVKTNY--ENSPSVGTALSD 435

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
              + G   +A ++  ++  +     AWS++L
Sbjct: 436 SYSKIGDANEAAKIFELIDEK--DIVAWSAML 465


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 305/844 (36%), Positives = 480/844 (56%), Gaps = 42/844 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L  E  + +  +AI +   M      PD   +   LK     +   +G  +H  + +   
Sbjct: 38  LIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDL 97

Query: 109 GLSSVTVANTLVNMYGKCGSDMWD-VYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALE 166
            L SVT+ N+L+++Y KCG   W+    +F  + + +D +SW++M++          AL 
Sbjct: 98  QLDSVTL-NSLISLYSKCGQ--WEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALL 154

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALM 224
            F  M+ +   P+ +   +   ACS     + + +G  + G  ++ G  + +  +   L+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACST---AEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211

Query: 225 AMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            M+ K GR D   A  +F+   +R+ V+W  +++ L Q     EA+    +M L G +PD
Sbjct: 212 DMFVK-GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPD 270

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGR 339
             +++ V+ AC+++E+L  G+++H+ A+R+ + +D   VG  L++MY  C     +   R
Sbjct: 271 RFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC-VGCCLINMYAKCSVDGSMCAAR 329

Query: 340 RVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           ++FD I D  +  W AMITGY Q   YDEEAL LF  M  +  + PN  T SS + AC  
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACAN 388

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A    E +  HA+KLG      V N+L+ MY+R GRI+ ++  FD +  ++ +S+NT+
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I  Y       +AL L  E+++                      ++ T  ++L G  ++ 
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQG-----------------MGASAFTFASLLSGAASIG 491

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            + KG++IHA  I++ L  +  V +AL+ MY++CG +  A +VF+ M  RNVI+W  II 
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            +  HG   + LEL   M+ EG     V+PN VT+IA+ +ACSH G+V+EG   F  M  
Sbjct: 552 GFAKHGFATQALELFHKMLEEG-----VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYT 606

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           ++G+ P  +HYAC+VD+LGR+G + +A Q IN MP + D A  W + LGACR+H N+E+G
Sbjct: 607 EHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKAD-ALVWRTFLGACRVHGNLELG 665

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           + AA+ +   EP   + Y+LLSN+Y+S   WD+  ++RK MKE  + KE GCSW+E  ++
Sbjct: 666 KHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENK 725

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +HKF  GD SH ++ +++  L+NLS +++K GYVP+   VLH+V EE+KE LL  HSEK+
Sbjct: 726 VHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKI 785

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AFG+++T     IRV KNLR+C DCH A K+IS    REII+RD  RFHH K+G CSC
Sbjct: 786 AVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSC 845

Query: 879 GDYW 882
            +YW
Sbjct: 846 NEYW 849



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 166/563 (29%), Positives = 283/563 (50%), Gaps = 29/563 (5%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           ATS+      +R   SW   +   A +N    A+L++++M  +   P+ + F A  +A +
Sbjct: 120 ATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
             + +S+G  I   VVK GY  S V V   L++M+ K   D+   +KVF+++ E++ V+W
Sbjct: 180 TAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTW 239

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
             MI  L +FG    A++ F  M+ S  EP  FTL  V  AC+N+   + L LG+Q+H  
Sbjct: 240 TLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM---ELLLLGQQLHSQ 296

Query: 209 SLRVG-EWNTFIMNALMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           ++R G   +  +   L+ MYAK    G +  A+ +F    D ++ SW  +++   Q   +
Sbjct: 297 AIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGY 356

Query: 265 -LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EA+   R M L  + P+  + +S L AC++L  L  G+++  +A++      N  V +
Sbjct: 357 DEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC-VAN 415

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           +L+ MY     ++  R+ FD + +K +  +N +I  Y +N   EEAL LF ++E+  G+ 
Sbjct: 416 SLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIED-QGMG 474

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
            +A T +S++            E IH   IK GL  ++ V NAL+ MYSR G IE +  +
Sbjct: 475 ASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQV 534

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+DME R+ +SW ++ITG+    +HG A   L     M EE  R              PN
Sbjct: 535 FEDMEDRNVISWTSIITGF---AKHGFATQALELFHKMLEEGVR--------------PN 577

Query: 504 SITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            +T + VL  C  +  + +G K   +    + +   +   + +VD+  + G L+ A +  
Sbjct: 578 LVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFI 637

Query: 563 DLMPVR-NVITWNVIIMAYGMHG 584
           + MP + + + W   + A  +HG
Sbjct: 638 NSMPYKADALVWRTFLGACRVHG 660


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/810 (36%), Positives = 465/810 (57%), Gaps = 30/810 (3%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           +PD   F A+L+  +  +++  G+++H HV   G+  +++ V   L+ MY +CGS + + 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNL-VCGHLIQMYAQCGS-VPEA 58

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            +VF+ +  KD  +W  MI   C+ G +D AL  F  M   +V P+  T V++  AC++ 
Sbjct: 59  QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 118

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
              + L+ G ++HG  L+ G E + F+  AL+ MY K G V  A   FK  E RD+VSW 
Sbjct: 119 ---ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWT 175

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++++  Q+D+F  A    R+M L G+ P+ +++ +V  A      L  GK ++   + +
Sbjct: 176 AMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGL-VSS 234

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            ++  +  V ++ V+M+ N   +   RR+F+ + D+ +  WN +IT Y QNE   EA+ L
Sbjct: 235 GVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRL 294

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F ++++  G+  N  T   ++       +    + IH    + G  RD  V  ALM +Y 
Sbjct: 295 FGRLQQ-DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYG 353

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R      +  IF DM  +D ++W  M   Y   G   +AL L +EMQ +E  +       
Sbjct: 354 RCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRR------- 405

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                    P S TL+ VL  C  L+AL KG++IH++ I N    ++VV +AL++MY KC
Sbjct: 406 ---------PTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKC 456

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +  A  VF+ M  R+++ WN ++ AY  HG   E L+L   M  +G     VK + V+
Sbjct: 457 GKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG-----VKADAVS 511

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F+++ +A SHSG V++G   F  M  D+ I P+P+ Y CVVDLLGRAG++++A  ++  +
Sbjct: 512 FVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKL 571

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
                    W +LLGACR H   +  + AA+ +   +P  +  YV+LSN+Y++A  WD  
Sbjct: 572 SGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGV 631

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             +RK M+  GV+KEPG S IE  + +H+FL GD SH +   ++  L+ L+  MR  GY+
Sbjct: 632 NRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYI 691

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           PDT  +LH+V +E KE +L  HSE+LAIAFG+++TPPGT +RV KNLRVC+DCH ATK+I
Sbjct: 692 PDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYI 751

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SK+  REI++RD  RFH+FK+G CSC DYW
Sbjct: 752 SKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 12/439 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +   +  A+  + +M   D+ P    + A+L A A  + L  G +IH  +
Sbjct: 72  AWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQI 131

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++ G+    V V   L+NMY KCGS    WD +K   R+  +D VSW +MIA   +  ++
Sbjct: 132 LQQGFE-GDVFVGTALINMYNKCGSVRGAWDSFK---RLEHRDVVSWTAMIAACVQHDQF 187

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRVGEWNTFIM 220
            LA   +R M    V P+  TL +V  A  + +    L  G+ V+G  S  V E +  +M
Sbjct: 188 ALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNY---LSEGKFVYGLVSSGVMESDVRVM 244

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N+ + M+   G + DA+ LF+   DRD+V+WN +++   QN+ F EAV    ++   G+K
Sbjct: 245 NSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVK 304

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            + ++   +L   + L  L  GK IH   ++      ++ V +AL+ +Y  C       +
Sbjct: 305 ANDITFVLMLNVYTSLTSLAKGKVIHEL-VKEAGYDRDAVVATALMSLYGRCEAPGQAWK 363

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  +  K +  W  M   Y QN + +EAL LF +M ++ G  P + T+ +V+  C    
Sbjct: 364 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM-QLEGRRPTSATLVAVLDTCAHLA 422

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A      IH H I+     +  V+ AL++MY + G++  + ++F+ M  RD + WN+M+ 
Sbjct: 423 ALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLG 482

Query: 461 GYTICGQHGDALMLLREMQ 479
            Y   G + + L L  +MQ
Sbjct: 483 AYAQHGYYDETLQLFNQMQ 501


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 303/795 (38%), Positives = 462/795 (58%), Gaps = 48/795 (6%)

Query: 98  QIHAHVVKYG--YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           QI A ++ +G  Y LSS+T    L + +   G+ +  V ++F+++++ D   +N +I   
Sbjct: 32  QIQAQLILHGIHYDLSSIT---KLTHKFFDLGA-VAHVRQLFNKVSKPDLFLFNVLIR-- 85

Query: 156 CRFGKWDLALEAFRMMLYS------NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
              G  D  L    + LY+      N+ P +FT    A A S  SR +  R+G  +H +S
Sbjct: 86  ---GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTY---AFAISAASRLEDERVGVLLHAHS 139

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +  G   N F+ +A++ +Y K  R + A+ +F    +RD V WNT++S  S+N  F +++
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M   G+  D  ++A+VL A + L+    G  I   A +  +  D  +V + L+ +
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD-VYVLTGLISL 258

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C +   GR +FD I    +  +NAMI+GY  N   E A+ LF ++   +G   N++T
Sbjct: 259 YSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL-ASGQRVNSST 317

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +  ++P  +          I   ++K+G+     V  AL  +Y R+  ++ ++ +FD+  
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +   SWN MI+GYT  G    A+ L +EM                    +  PN +T+ 
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMP------------------QLSPNPVTVT 419

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  L AL+ GK +H       L ++V V +ALVDMYAKCG +  AR++FDLM  +
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           NV+TWN +I  YG+HG G+E L+L   M+  G     + P  VTF+++  ACSHSG+VSE
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSG-----IPPTGVTFLSILYACSHSGLVSE 534

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G ++F+ M ++YG +P  +HYAC+VD+LGRAG++ +A + I  MP E   A  W +LLGA
Sbjct: 535 GNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA-VWGALLGA 593

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C IH+N E+  +A++ LF L+P+   +YVLLSNIYS+ + + KA  VR+ +K+  + K P
Sbjct: 594 CMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTP 653

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT-SCVLHNVNEEEK 807
           GC+ IE  D+ + F +GD SH Q+  +   LE L+ +MR+ GY  +T +  LH+V +EEK
Sbjct: 654 GCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEK 713

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           E ++  HSEKLAIAFG+++T PGT IR+ KNLRVC DCH ATKFISKI  R I++RD  R
Sbjct: 714 ELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANR 773

Query: 868 FHHFKNGTCSCGDYW 882
           FHHFKNG CSCGDYW
Sbjct: 774 FHHFKNGICSCGDYW 788



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 263/529 (49%), Gaps = 29/529 (5%)

Query: 59  REAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + +I  Y  +  +++++PDNF +   + A + ++D  +G  +HAH +  G   S++ V +
Sbjct: 94  KSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA-SNLFVGS 152

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            +V++Y K  +      KVFD + E+D V WN+MI+   R   ++ ++  F  ML   + 
Sbjct: 153 AIVDLYFKF-TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
             S TL +V  A + L      RLG  +   + + G   + +++  L+++Y+K G+    
Sbjct: 212 FDSTTLATVLTAVAELQE---YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF   +  DL+S+N ++S  + N +   AV   R++   G + +  ++  ++P     
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L   + I   +L+  I++  S V +AL  +YC   EV+  R++FD   +K +A WNAM
Sbjct: 329 NHLQLSRLIQNLSLKIGIILQPS-VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAM 387

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+GY QN   + A+ LF +M  +  L PN  T++S++ AC +  A    + +HG      
Sbjct: 388 ISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           L  + YV  AL+DMY++ G I  ++ +FD M  ++ V+WN MITGY + G   +AL L  
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNML 535
           EM              L   +    P  +T +++L  C     +++G EI H+ A     
Sbjct: 506 EM--------------LQSGI---PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                  + +VD+  + G L  A    + MP+      W  ++ A  +H
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW  ++ S    N   +  +S  +     + P+     ++L A A +  LS+GK +H  +
Sbjct: 383 SW-NAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHG-L 440

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     S+V V+  LV+MY KCGS + +  ++FD + +K+ V+WN+MI      G    
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGS-IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL+ F  ML S + P+  T +S+  ACS+
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSH 528


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 303/795 (38%), Positives = 462/795 (58%), Gaps = 48/795 (6%)

Query: 98  QIHAHVVKYG--YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           QI A ++ +G  Y LSS+T    L + +   G+ +  V ++F+++++ D   +N +I   
Sbjct: 32  QIQAQLILHGIHYDLSSIT---KLTHKFFDLGA-VAHVRQLFNKVSKPDLFLFNVLIR-- 85

Query: 156 CRFGKWDLALEAFRMMLYS------NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
              G  D  L    + LY+      N+ P +FT    A A S  SR +  R+G  +H +S
Sbjct: 86  ---GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTY---AFAISAASRLEDERVGVLLHAHS 139

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +  G   N F+ +A++ +Y K  R + A+ +F    +RD V WNT++S  S+N  F +++
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M   G+  D  ++A+VL A + L+    G  I   A +  +  D  +V + L+ +
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD-VYVLTGLISL 258

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C +   GR +FD I    +  +NAMI+GY  N   E A+ LF ++   +G   N++T
Sbjct: 259 YSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL-ASGQRVNSST 317

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +  ++P  +          I   ++K+G+     V  AL  +Y R+  ++ ++ +FD+  
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +   SWN MI+GYT  G    A+ L +EM                    +  PN +T+ 
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMP------------------QLSPNPVTVT 419

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  L AL+ GK +H       L ++V V +ALVDMYAKCG +  AR++FDLM  +
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           NV+TWN +I  YG+HG G+E L+L   M+  G     + P  VTF+++  ACSHSG+VSE
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSG-----IPPTGVTFLSILYACSHSGLVSE 534

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G ++F+ M ++YG +P  +HYAC+VD+LGRAG++ +A + I  MP E   A  W +LLGA
Sbjct: 535 GNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA-VWGALLGA 593

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C IH+N E+  +A++ LF L+P+   +YVLLSNIYS+ + + KA  VR+ +K+  + K P
Sbjct: 594 CMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTP 653

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT-SCVLHNVNEEEK 807
           GC+ IE  D+ + F +GD SH Q+  +   LE L+ +MR+ GY  +T +  LH+V +EEK
Sbjct: 654 GCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEK 713

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           E ++  HSEKLAIAFG+++T PGT IR+ KNLRVC DCH ATKFISKI  R I++RD  R
Sbjct: 714 ELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANR 773

Query: 868 FHHFKNGTCSCGDYW 882
           FHHFKNG CSCGDYW
Sbjct: 774 FHHFKNGICSCGDYW 788



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 263/529 (49%), Gaps = 29/529 (5%)

Query: 59  REAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + +I  Y  + + ++++PDNF +   + A + ++D  +G  +HAH +  G   S++ V +
Sbjct: 94  KSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA-SNLFVGS 152

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            +V++Y K  +      KVFD + E+D V WN+MI+   R   ++ ++  F  ML   + 
Sbjct: 153 AIVDLYFKF-TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
             S TL +V  A + L      RLG  +   + + G   + +++  L+++Y+K G+    
Sbjct: 212 FDSTTLATVLTAVAELQE---YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF   +  DL+S+N ++S  + N +   AV   R++   G + +  ++  ++P     
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L   + I   +L+  I++  S V +AL  +YC   EV+  R++FD   +K +A WNAM
Sbjct: 329 NHLQLSRLIQNLSLKIGIILQPS-VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAM 387

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+GY QN   + A+ LF +M  +  L PN  T++S++ AC +  A    + +HG      
Sbjct: 388 ISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           L  + YV  AL+DMY++ G I  ++ +FD M  ++ V+WN MITGY + G   +AL L  
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNML 535
           EM              L   +    P  +T +++L  C     +++G EI H+ A     
Sbjct: 506 EM--------------LQSGI---PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                  + +VD+  + G L  A    + MP+      W  ++ A  +H
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW  ++ S    N   +  +S  +     + P+     ++L A A +  LS+GK +H  +
Sbjct: 383 SW-NAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHG-L 440

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     S+V V+  LV+MY KCGS + +  ++FD + +K+ V+WN+MI      G    
Sbjct: 441 IKSERLESNVYVSTALVDMYAKCGS-IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL+ F  ML S + P+  T +S+  ACS+
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSH 528


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/718 (40%), Positives = 423/718 (58%), Gaps = 48/718 (6%)

Query: 199 LRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           LRLG QVH     N + V E   F+ + L+ +Y + G V+DA+ +F    +R++ SW  I
Sbjct: 26  LRLGFQVHAQLVVNGVDVCE---FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAI 82

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +        + E +     M   G++PD      V  ACS L+    GK+++ Y L    
Sbjct: 83  MEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG- 141

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              NS V  +++DM+  C  ++  RR F+ I  K + +WN M++GY      ++AL +F 
Sbjct: 142 FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFR 201

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSR 433
           KM  + G+ PN+ T++S V AC           IHG+ IK+  L  D  V N+L+D Y++
Sbjct: 202 KMV-LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 260

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTM--ITGYTICGQHGDALMLLREMQNME-------EE 484
              +E+++  F  ++  D VSWN M  +TG+T   Q+GD    L   Q M        E 
Sbjct: 261 CRSVEVARRKFGMIKQTDLVSWNAMLAVTGFT---QYGDGKAALEFFQRMHIACSVFSEL 317

Query: 485 KNRN------------------NVYDL--DETVLRPKPNSITLMTVLPGCGALSALAKGK 524
             R+                  N  DL  +  +   + N++T+++ LP C  L+AL +GK
Sbjct: 318 STRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK 377

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           EIH + IR  L T   + ++L+DMY +CG +  +RR+FDLMP R++++WNV+I  YGMHG
Sbjct: 378 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 437

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G + + L +     G     +KPN +TF  L +ACSHSG++ EG   F  MK +Y ++P
Sbjct: 438 FGMDAVNLFQQFRTMG-----LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
           + + YAC+VDLL RAG+  +  + I  MP E   A  W SLLGACRIH N ++ E AA+ 
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFE-PNAAVWGSLLGACRIHCNPDLAEYAARY 551

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           LF LEP  + +YVL++NIYS+A  W+ A  +R  MKE GV K PGCSWIE   ++H F+ 
Sbjct: 552 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 611

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
           GD SH   EQ+   +E+L   +++ GYVPDT+ VL +V+E+EKE  LCGHSEK+A+AFG+
Sbjct: 612 GDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGL 671

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++T  GT +R+ KNLRVC DCH ATKFISK+E R+II+RD  RFHHF +G CSCGDYW
Sbjct: 672 ISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 263/550 (47%), Gaps = 69/550 (12%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + ++L+    + +L LG Q+HA +V  G  +    + + L+ +Y + G  + D  ++FD+
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF-LGSRLLEVYCQTGC-VEDARRMFDK 70

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           ++E++  SW +++   C  G ++  ++ F +M+   V P  F    V  ACS L      
Sbjct: 71  MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK---NY 127

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           R+G+ V+   L +G E N+ +  +++ M+ K GR+D A+  F+  E +D+  WN +VS  
Sbjct: 128 RVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 187

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +   +F +A+   R+M L G+KP+ ++IAS + AC++L +L  G+EIH Y ++ + L  +
Sbjct: 188 TSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD 247

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM--ITGYGQNEYDEEALMLFIKM 376
             VG++LVD Y  CR VE  RR F  I    +  WNAM  +TG+ Q    + AL  F +M
Sbjct: 248 LLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307

Query: 377 EEVAGLWP----------------------------------------NATTMSSVVPAC 396
                ++                                         N  TM S +PAC
Sbjct: 308 HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 367

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            +  A    + IH   I+ GL    ++ N+L+DMY R G I+ S+ IFD M  RD VSWN
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+ Y + G   DA+ L ++ + M                   KPN IT   +L  C  
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMG-----------------LKPNHITFTNLLSACSH 470

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITW 573
              + +G + +   ++   A D  V   + +VD+ ++ G  N      + MP   N   W
Sbjct: 471 SGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529

Query: 574 NVIIMAYGMH 583
             ++ A  +H
Sbjct: 530 GSLLGACRIH 539



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 56/464 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +        + E I  +  M    ++PD+F FP V KA + +++  +GK ++ ++
Sbjct: 78  SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 137

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G+  +S  V  ++++M+ KCG  M    + F+ I  KD   WN M++     G++  
Sbjct: 138 LSIGFEGNS-CVKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 195

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMN 221
           AL  FR M+   V+P+S T+ S   AC+NLS    LR GR++HG  ++V E ++   + N
Sbjct: 196 ALNVFRKMVLEGVKPNSITIASAVSACTNLSL---LRHGREIHGYCIKVEELDSDLLVGN 252

Query: 222 ALMAMYAKLGRVDDAK-------------------------------------------T 238
           +L+  YAK   V+ A+                                           +
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F     RD+V WN+I+S+ +Q+ + + A+  LR+M L  ++ + V++ S LPACS L  
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GKEIH + +R  +   N F+ ++L+DMY  C  ++  RR+FD +  + +  WN MI+
Sbjct: 373 LRQGKEIHQFIIRCGLDTCN-FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            YG + +  +A+ LF +   + GL PN  T ++++ AC  S    ++   +   +K    
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTM-GLKPNHITFTNLLSACSHS-GLIEEGWKYFKMMKTEYA 489

Query: 419 RDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
            D  V+    ++D+ SR G+   +    + M    +   W +++
Sbjct: 490 MDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 533



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 193/355 (54%), Gaps = 25/355 (7%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+L  C  L  L  G ++HA  + N + +   F+GS L+++YC    VE  RR+FD +S
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDV-CEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 347 DKKIALWNAMITGY-GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           ++ +  W A++  Y G  +Y+E   + ++ + E  G+ P+      V  AC   + +   
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE--GVRPDHFVFPKVFKACSELKNYRVG 130

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + ++ + + +G   +  V+ +++DM+ + GR++I++  F+++E +D   WN M++GYT  
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 190

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G+   AL + R+M              + E V   KPNSIT+ + +  C  LS L  G+E
Sbjct: 191 GEFKKALNVFRKM--------------VLEGV---KPNSITIASAVSACTNLSLLRHGRE 233

Query: 526 IHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM-- 582
           IH Y I+   L +D++VG++LVD YAKC  +  ARR F ++   ++++WN ++   G   
Sbjct: 234 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQ 293

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIALFAACSHSGMVSEGMDLFYKM 636
           +G+G+  LE  + M    S   E+   + V + ++ +AC+ SG     +DL  +M
Sbjct: 294 YGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM 348



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 8/180 (4%)

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  L  L  G ++HA  + N +     +GS L+++Y + GC+  ARR+FD M  R
Sbjct: 15  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           NV +W  I+  Y   G+ +E ++L   MV EG     V+P+   F  +F ACS       
Sbjct: 75  NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG-----VRPDHFVFPKVFKACSELKNYRV 129

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G D++  M    G E +      ++D+  + G+++ A +    +  EF     W+ ++  
Sbjct: 130 GKDVYDYML-SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIMVSG 186



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 37/249 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + + A+S +   A+    EM  S+++ +     + L A + +  L  GK+IH  ++
Sbjct: 325 WNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFII 384

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G    +  + N+L++MYG+CGS +    ++FD + ++D VSWN MI+     G    A
Sbjct: 385 RCGLDTCNF-ILNSLIDMYGRCGS-IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 442

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           +  F+      ++P+  T  ++  ACS              H   +  G W  F M  + 
Sbjct: 443 VNLFQQFRTMGLKPNHITFTNLLSACS--------------HSGLIEEG-WKYFKM--MK 485

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
             YA                D  +  +  +V  LS+  +F E + F+ +M     +P+  
Sbjct: 486 TEYAM---------------DPAVEQYACMVDLLSRAGQFNETLEFIEKMPF---EPNAA 527

Query: 285 SIASVLPAC 293
              S+L AC
Sbjct: 528 VWGSLLGAC 536


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/724 (41%), Positives = 427/724 (58%), Gaps = 36/724 (4%)

Query: 164 ALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMN 221
           AL AF  M   S   P   T  S+   C+    R  L  GR VH   + R          
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAA---RADLATGRAVHAQLAARGLSPEALAAT 264

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIK 280
           AL  MYAK  R  DA+ +F     RD V+WN +V+  ++N     AV M +R     G +
Sbjct: 265 ALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGER 324

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD V++ SVLPAC+  + L   +E+HA+A+R     +   V +A++D+YC C  V+  R+
Sbjct: 325 PDAVTLVSVLPACADAQALGACREVHAFAVRGG-FDEQVNVSTAILDVYCKCGAVDSARK 383

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS--SVVPACVR 398
           VFD + D+    WNAMI GY +N    EAL LF +M    G   + T +S  + + AC  
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRM---VGEGVDVTDVSVLAALHACGE 440

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
                +   +H   +++GL  +  V NAL+ MY +  R +++  +FD++  +  VSWN M
Sbjct: 441 LGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAM 500

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G T  G   DA+ L   MQ         NV          KP+S TL++++P    +S
Sbjct: 501 ILGCTQNGSSEDAVRLFSRMQ-------LENV----------KPDSFTLVSIIPALADIS 543

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
              + + IH Y+IR  L  DV V +AL+DMYAKCG ++ AR +F+    R+VITWN +I 
Sbjct: 544 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIH 603

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            YG HG G+  +EL + M + G       PNE TF+++ +ACSH+G+V EG + F  MK+
Sbjct: 604 GYGSHGSGKVAVELFEEMKSSGK-----VPNETTFLSVLSACSHAGLVDEGQEYFSSMKE 658

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           DYG+EP  +HY  +VDLLGRAGK+ +A+  I  MP E      + ++LGAC++H+NVE+ 
Sbjct: 659 DYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPME-PGISVYGAMLGACKLHKNVELA 717

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E +AQ +F LEP+   ++VLL+NIY++A LW     VR  M++ G++K PG S ++  +E
Sbjct: 718 EESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNE 777

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           IH F +G  +HQQ++ ++  L  L E ++  GYVPDT  + H+V ++ K  LL  HSEKL
Sbjct: 778 IHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKL 836

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIA+G++ T PGTTI++ KNLRVC DCH ATK IS +  REII+RD++RFHHFK+G CSC
Sbjct: 837 AIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSC 896

Query: 879 GDYW 882
           GDYW
Sbjct: 897 GDYW 900



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 177/577 (30%), Positives = 287/577 (49%), Gaps = 40/577 (6%)

Query: 49  LRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           LR+ A  +  R A+ ++  M+  S   P    F ++LK  A   DL+ G+ +HA +   G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE- 166
               ++  A  L NMY KC     D  +VFDR+  +D+V+WN+++A   R G  + A+  
Sbjct: 256 LSPEALA-ATALANMYAKCRRP-GDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGM 313

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
             RM       P + TLVSV  AC++      L   R+VH  ++R G +    +  A++ 
Sbjct: 314 VVRMQEEDGERPDAVTLVSVLPACADA---QALGACREVHAFAVRGGFDEQVNVSTAILD 370

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           +Y K G VD A+ +F   +DR+ VSWN ++   ++N    EA+   ++M   G+    VS
Sbjct: 371 VYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVS 430

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + + L AC  L  LD G+ +H   +R   L  N  V +AL+ MYC C+  +   +VFD +
Sbjct: 431 VLAALHACGELGFLDEGRRVHELLVRIG-LESNVNVMNALITMYCKCKRTDLAAQVFDEL 489

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             K    WNAMI G  QN   E+A+ LF +M ++  + P++ T+ S++PA          
Sbjct: 490 GYKTRVSWNAMILGCTQNGSSEDAVRLFSRM-QLENVKPDSFTLVSIIPALADISDPLQA 548

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             IHG++I+L L +D YV  AL+DMY++ GR+ I++++F+    R  ++WN MI GY   
Sbjct: 549 RWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGY--- 605

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G HG   +    ++  EE K+   V           PN  T ++VL  C     + +G+E
Sbjct: 606 GSHGSGKV---AVELFEEMKSSGKV-----------PNETTFLSVLSACSHAGLVDEGQE 651

Query: 526 IHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
             +    +  L   +     +VD+  + G L+ A      MP+   I+         ++G
Sbjct: 652 YFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGIS---------VYG 702

Query: 585 EGQEVLELLKNM-VAEGS--RGGEVKPNEVTFIALFA 618
                 +L KN+ +AE S  R  E++P E  +  L A
Sbjct: 703 AMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLA 739



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 223/462 (48%), Gaps = 24/462 (5%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQDLSLGK 97
            R + +W   +   AR+     A+   + M   D + PD     +VL A A  Q L   +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++HA  V+ G+    V V+  ++++Y KCG+ +    KVFD + +++ VSWN+MI     
Sbjct: 348 EVHAFAVRGGFD-EQVNVSTAILDVYCKCGA-VDSARKVFDGMQDRNSVSWNAMIKGYAE 405

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    AL  F+ M+   V+ +  ++++   AC  L   D    GR+VH   +R+G E N
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE---GRRVHELLVRIGLESN 462

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             +MNAL+ MY K  R D A  +F     +  VSWN ++   +QN    +AV    +M L
Sbjct: 463 VNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQL 522

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KPD  ++ S++PA + +      + IH Y++R   L  + +V +AL+DMY  C  V 
Sbjct: 523 ENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVS 581

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F+   D+ +  WNAMI GYG +   + A+ LF +M+  +G  PN TT  SV+ AC
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKS-SGKVPNETTFLSVLSAC 640

Query: 397 VRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             +       E F   +  +G    L  G + Y    ++D+  R G++  + +    M +
Sbjct: 641 SHAGLVDEGQEYFSSMKEDYG----LEPGMEHY--GTMVDLLGRAGKLHEAWSFIQKMPM 694

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
              +S    + G   C  H +  +     Q + E +    VY
Sbjct: 695 EPGISVYGAMLG--ACKLHKNVELAEESAQRIFELEPEEGVY 734



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 145/271 (53%), Gaps = 8/271 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q R   SW   ++  A +    EA+  +  M    +   + +  A L A   +  L  
Sbjct: 387 GMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE 446

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SDMWDVYKVFDRITEKDQVSWNSMIAT 154
           G+++H  +V+ G   S+V V N L+ MY KC  +D+    +VFD +  K +VSWN+MI  
Sbjct: 447 GRRVHELLVRIGLE-SNVNVMNALITMYCKCKRTDL--AAQVFDELGYKTRVSWNAMILG 503

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             + G  + A+  F  M   NV+P SFTLVS+  A +++S  D L+  R +HG S+R+  
Sbjct: 504 CTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADIS--DPLQ-ARWIHGYSIRLHL 560

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           + + +++ AL+ MYAK GRV  A++LF S  DR +++WN ++     +     AV    +
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           M   G  P+  +  SVL ACSH  ++D G+E
Sbjct: 621 MKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 327/900 (36%), Positives = 471/900 (52%), Gaps = 120/900 (13%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG---YGLSSVTVA------- 116
           E T  D+ P +FA  ++LK    +  +   +QIH  ++ YG   Y  S ++V+       
Sbjct: 23  ECTGRDVSPTHFA--SLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSH 77

Query: 117 ---------NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
                      +V  Y  CG+   D   V +R+     V WN ++      G+ D A+  
Sbjct: 78  SYVSPKSLGTGVVASYLACGATS-DALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGV 136

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
              ML +  +P  FTL     AC  L      R G   HG     G E N F+ NAL+AM
Sbjct: 137 SCRMLRAGTKPDHFTLPYALKACGELP---SYRSGSAFHGLICCNGFESNVFVCNALVAM 193

Query: 227 YAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQN-------DKFLEAVMFLRQMAL 276
           Y++ G ++DA  +F     +   D++SWN+IV++  +        D F E    + + A 
Sbjct: 194 YSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKAT 253

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
              + D +SI ++LPAC+ L+ L   KEIH+YA+RN    D +FV +AL+D Y  C  ++
Sbjct: 254 NE-RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFAD-AFVCNALIDTYAKCGSMK 311

Query: 337 CGRRVFDFISDKKIALWNAMITGY-----------------------------------G 361
               VF+ +  K +  WNAM+TGY                                    
Sbjct: 312 DAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYA 371

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL---- 417
           Q  Y +EAL  F +M  + G  PN+ T+ S++ AC    A       H +++K  L    
Sbjct: 372 QRGYGQEALDTFQQMI-LYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLD 430

Query: 418 --------GRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQ 467
                   G D  V NAL+DMYS+    + ++TIF+ +    R+ V+W  MI GY   G 
Sbjct: 431 NDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGD 490

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRP---KPNSITLMTVLPGCGALSALAKGK 524
             DAL L  EM                  + +P    PN+ T+  +L  C  LS+L  GK
Sbjct: 491 SNDALKLFSEM------------------ISKPYAVAPNAYTISCILMACAHLSSLRMGK 532

Query: 525 EIHAYAIRNMLATDVV--VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           +IHAY  R+      V  V + L+DMY+KCG ++ AR VFD MP RN ++W  ++  YGM
Sbjct: 533 QIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGM 592

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E L++   M   G       P++++F+ L  ACSHSGMV +G+D F  M+ DYG+
Sbjct: 593 HGRGKEALDIFDKMQKAG-----FVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGV 647

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             S  HYACV+DLL R+G+++ A++ I  MP E   A  W +LL ACR+H NVE+ E A 
Sbjct: 648 IASAQHYACVIDLLARSGRLDKAWKTIQEMPME-PSAAIWVALLSACRVHSNVELAEYAL 706

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             L  ++ +    Y L+SNIY++A+ W     +R+ MK+ G++K PGCSW++       F
Sbjct: 707 NKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASF 766

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD SH  S +++  LE L  R++  GYVP+T+  LH+V++EEK  LL  HSEKLA+A+
Sbjct: 767 FVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAY 826

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+L T PG  IR+ KNLRVC DCH A  +ISKI   EII+RD  RFHHFKNG+CSCG YW
Sbjct: 827 GLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 173/626 (27%), Positives = 287/626 (45%), Gaps = 98/626 (15%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+     +   AI     M R+  +PD+F  P  LKA   +     G   H  + 
Sbjct: 117 WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLIC 176

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
             G+  S+V V N LV MY + GS + D   VFD IT K   D +SWNS++A   +    
Sbjct: 177 CNGFE-SNVFVCNALVAMYSRSGS-LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNP 234

Query: 162 DLALEAFRMMLY------SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             AL+ F  M        +N      ++V++  AC++L     L   +++H  ++R G +
Sbjct: 235 RTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL---KALPQTKEIHSYAIRNGTF 291

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF---------- 264
            + F+ NAL+  YAK G + DA  +F   E +D+VSWN +V+  +Q+ KF          
Sbjct: 292 ADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNM 351

Query: 265 -------------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                                     EA+   +QM L G +P+ V+I S+L AC+ L  L
Sbjct: 352 RKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGAL 411

Query: 300 DTGKEIHAYALRNDIL-----------IDNSFVGSALVDMYCNCREVECGRRVFDFIS-- 346
             G E HAY+L+  +L            ++  V +AL+DMY  CR  +  R +F+ I   
Sbjct: 412 SQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRR 471

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           ++ +  W  MI GY Q     +AL LF +M  +   + PNA T+S ++ AC    +    
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMG 531

Query: 406 EGIHGHAIKLGLGRDR--YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           + IH +  +         +V N L+DMYS+ G ++ ++ +FD M  R+ VSW +M++GY 
Sbjct: 532 KQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G+  +AL +  +MQ                      P+ I+ + +L  C     + +G
Sbjct: 592 MHGRGKEALDIFDKMQKAGF-----------------VPDDISFLVLLYACSHSGMVDQG 634

Query: 524 KEIHAYAIRNMLATDV-VVGSA-----LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            +       +++ +D  V+ SA     ++D+ A+ G L+ A +    MP+  +   W  +
Sbjct: 635 LDYF-----DIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVAL 689

Query: 577 IMAYGMHGE---GQEVLELLKNMVAE 599
           + A  +H      +  L  L +M AE
Sbjct: 690 LSACRVHSNVELAEYALNKLVSMKAE 715



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 22/277 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+    +EA+ ++ +M     +P++    ++L A A +  LS G + HA+ 
Sbjct: 362 TWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYS 421

Query: 104 VK-----------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNS 150
           +K                  + V N L++MY KC S       +F+ I   E++ V+W  
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRS-FKAARTIFNSIPRRERNVVTWTV 480

Query: 151 MIATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           MI    ++G  + AL+ F  M+     V P+++T+  + +AC++LS    LR+G+Q+H  
Sbjct: 481 MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLS---SLRMGKQIHAY 537

Query: 209 SLRVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             R  E+ +   F+ N L+ MY+K G VD A+ +F S   R+ VSW +++S    + +  
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           EA+    +M   G  PD +S   +L ACSH  M+D G
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 296/748 (39%), Positives = 428/748 (57%), Gaps = 29/748 (3%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VFD + E++ VS+ ++I    +  K+  A E F  +     E + F   +V      L  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVL---KLLVS 58

Query: 196 RDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            +   LGR VHG  L+VG   NTFI  AL+  Y+  G V  A+ +F     +D+VSW  +
Sbjct: 59  MEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGM 118

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           ++S ++ND F EA+ F  QM + G KP+  + A VL AC  L+  D GK +H   L+ + 
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             D  +VG  L+++Y  C + +   R F  +    +  W+ MI+ + Q+   E+AL +F 
Sbjct: 179 ERD-LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M   A + PN  T SSV+ A    E+    + IHGHA+K GL  D +V NALM  Y++ 
Sbjct: 238 QMRR-AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G IE S  +F+ +  R+ VSWNT+I  Y   G    AL L   M   +            
Sbjct: 297 GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQ------------ 344

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                 +   +T  ++L  C  L+AL  G ++H    + +   DV VG+AL+DMYAKCG 
Sbjct: 345 -----VQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGS 399

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  AR +FD++ +R+ ++WN II  Y MHG G E +++   M     +  + KP+E+TF+
Sbjct: 400 IKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLM-----KETKCKPDELTFV 454

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +ACS++G + EG   F  MK DYGIEP  +HY C+V L+GR+G ++ A + I  +P 
Sbjct: 455 GVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPF 514

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E      W +LLGAC IH +VE+G I+AQ +  LEP   + +VLLSNIY+ A+ W     
Sbjct: 515 E-PSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAY 573

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK MK  GV+KEPG SWIE    +H F   D SH   + ++G LE L+ + RK GY P 
Sbjct: 574 VRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQ 633

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            + VL +V ++EKE LL  HSE+LA+AFG++  P G  IR+ KNLR+C DCH   K ISK
Sbjct: 634 LNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISK 693

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I  R+II+RD+ RFHHF+NG+CSC DYW
Sbjct: 694 IVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/587 (28%), Positives = 276/587 (47%), Gaps = 52/587 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++  +   A+SN+F EA   +  +     + + F F  VLK +  ++   LG+ +H  V
Sbjct: 13  SFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCV 72

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GYG S+  +   L++ Y   G  +    +VFD I+ KD VSW  MIA+      +  
Sbjct: 73  LKVGYG-SNTFIGTALIDAYSVSGC-VSMAREVFDEISSKDMVSWTGMIASYAENDCFSE 130

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F  M  +  +P++FT   V  AC  L   D    G+ VH + L+   E + ++   
Sbjct: 131 ALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDA---GKTVHCSVLKTNYERDLYVGVG 187

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y + G  DDA   F      D++ W+ ++S  +Q+ +  +A+    QM    + P+
Sbjct: 188 LLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPN 247

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + +SVL A + +E LD  K IH +AL+  +  D  FV +AL+  Y  C  +E    +F
Sbjct: 248 QFTFSSVLQASADIESLDLSKTIHGHALKAGLSTD-VFVSNALMACYAKCGCIEQSMELF 306

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +SD+    WN +I  Y Q    E AL LF  M     +     T SS++ AC    A 
Sbjct: 307 EALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQ-VQATEVTYSSILRACATLAAL 365

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +H    K   G+D  V NAL+DMY++ G I+ ++ +FD +++RD VSWN +I GY
Sbjct: 366 ELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGY 425

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           ++   HG  +  ++    M+E K               KP+ +T + VL  C     L +
Sbjct: 426 SM---HGLGVEAIKMFNLMKETK--------------CKPDELTFVGVLSACSNTGRLDE 468

Query: 523 GKEIHA-----YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           GK+        Y I   +       + +V +  + G L+ A +  + +P   +V+ W  +
Sbjct: 469 GKQYFTSMKQDYGIEPCMEH----YTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRAL 524

Query: 577 IMAYGMHGE-------GQEVLE----------LLKNMVAEGSRGGEV 606
           + A  +H +        Q VLE          LL N+ A   R G V
Sbjct: 525 LGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNV 571


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 306/808 (37%), Positives = 466/808 (57%), Gaps = 35/808 (4%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +FPA+LKA A ++D+  G ++H+ +VK GY  S+  + N LV+MY K   D+    ++FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAK-NDDLSAARRLFD 241

Query: 139 RITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
              EK D V WNS++++    GK    LE FR M  +   P+S+T+VS   AC   S   
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY-- 299

Query: 198 GLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             +LG+++H + L+    ++  ++ NAL+AMY + G++  A+ + +   + D+V+WN+++
Sbjct: 300 -AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
               QN  + EA+ F   M   G K D VS+ S++ A   L  L  G E+HAY +++   
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-W 417

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N  VG+ L+DMY  C       R F  + DK +  W  +I GY QN+   EAL LF  
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           + +   +  +   + S++ A    ++    + IH H ++ GL  D  +QN L+D+Y +  
Sbjct: 478 VAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR 535

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +  +  +F+ ++ +D VSW +MI+   + G   +A+ L R M                E
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV---------------E 580

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           T L    +S+ L+ +L    +LSAL KG+EIH Y +R     +  +  A+VDMYA CG L
Sbjct: 581 TGL--SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A+ VFD +  + ++ +  +I AYGMHG G+  +EL   M     R   V P+ ++F+A
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM-----RHENVSPDHISFLA 693

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           L  ACSH+G++ EG      M+ +Y +EP P+HY C+VD+LGRA  V +A++ + MM  E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
              A  W +LL ACR H   EIGEIAAQ L  LEP    + VL+SN+++    W+    V
Sbjct: 754 -PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 812

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE-GYVPD 794
           R KMK  G+ K PGCSWIE   ++HKF A D SH +S++++  L  ++ ++ +E GYV D
Sbjct: 813 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVAD 872

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  VLHNV+E EK  +L GHSE++AIA+G+L TP    +R+ KNLRVC DCH   K +SK
Sbjct: 873 TKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSK 932

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  R+I++RD  RFHHF++G CSCGD W
Sbjct: 933 LFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 298/597 (49%), Gaps = 39/597 (6%)

Query: 70  RSDIQPDNF---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           R D+  +N    AF  VL+     + +S G+Q+H+ + K         +A  LV MYGKC
Sbjct: 70  RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           GS + D  KVFD + ++   +WN+MI      G+   AL  +  M    V     +  ++
Sbjct: 130 GS-LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ L  RD +R G ++H   +++G  +T FI+NAL++MYAK   +  A+ LF  F++
Sbjct: 189 LKACAKL--RD-IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 246 R-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           + D V WN+I+SS S + K LE +   R+M + G  P+  +I S L AC        GKE
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHA  L++       +V +AL+ MY  C ++    R+   +++  +  WN++I GY QN 
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             +EAL  F  M   AG   +  +M+S++ A  R         +H + IK G   +  V 
Sbjct: 366 MYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N L+DMYS+          F  M  +D +SW T+I GY     H +AL L R++     E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                   +DE +L          ++L     L ++   KEIH + +R  L  D V+ + 
Sbjct: 485 --------IDEMILG---------SILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LVD+Y KC  + +A RVF+ +  ++V++W  +I +  ++G   E +EL + MV  G    
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG---- 582

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS-----PDHYACVVDL 655
            +  + V  + + +A +    +++G ++  Y ++  + +E S      D YAC  DL
Sbjct: 583 -LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 308/842 (36%), Positives = 481/842 (57%), Gaps = 44/842 (5%)

Query: 55  SNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           +   R A+ +   M R  I+P D+  F ++LK+    +D  LGK +HA ++++     SV
Sbjct: 39  AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98

Query: 114 TVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            + N+L+++Y K G  +   DV++   R  ++D VSW++M+A     G+   A++ F   
Sbjct: 99  -LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK 229
           L   + P+ +   +V  ACSN    D + +GR   G  ++ G  E +  +  +L+ M+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSN---SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 230 -LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                ++A  +F    + ++V+W  +++   Q     EA+ F   M L G + D  +++S
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFI 345
           V  AC+ LE L  GK++H++A+R+ ++ D   V  +LVDMY  C     V+  R+VFD +
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRM 331

Query: 346 SDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
            D  +  W A+ITGY +N     EA+ LF +M     + PN  T SS   AC        
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + + G A K GL  +  V N+++ M+ +  R+E ++  F+ +  ++ VS+NT + G   
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
                 A  LL E+   E                    ++ T  ++L G   + ++ KG+
Sbjct: 452 NLNFEQAFKLLSEITERE-----------------LGVSAFTFASLLSGVANVGSIRKGE 494

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IH+  ++  L+ +  V +AL+ MY+KCG ++ A RVF+ M  RNVI+W  +I  +  HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
               VLE    M+ EG     VKPNEVT++A+ +ACSH G+VSEG   F  M +D+ I+P
Sbjct: 555 FAIRVLETFNQMIEEG-----VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HYAC+VDLL RAG + DA++ IN MP + D    W + LGACR+H N E+G++AA+ 
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD-VLVWRTFLGACRVHSNTELGKLAARK 668

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +  L+P+  + Y+ LSNIY+ A  W+++ ++R+KMKE  + KE GCSWIE GD+IHKF  
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET----LLCGHSEKLAI 820
           GD +H  + Q++  L+ L   +++ GYVPDT  VLH + EE  E     LL  HSEK+A+
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAV 788

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG+++T     +RV KNLRVC DCH A K+IS +  REI+LRD+ RFHHFK+G CSC D
Sbjct: 789 AFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCND 848

Query: 881 YW 882
           YW
Sbjct: 849 YW 850



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 296/603 (49%), Gaps = 38/603 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +  +AI  ++E     + P+++ + AV++A +    + +G+     +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S V V  +L++M+ K  +   + YKVFD+++E + V+W  MI    + G    
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M+ S  E   FTL SV  AC+ L   + L LG+Q+H  ++R G  +  +  +L
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAEL---ENLSLGKQLHSWAIRSGLVDD-VECSL 308

Query: 224 MAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-LEAVMFLRQMALRG- 278
           + MYAK    G VDD + +F   ED  ++SW  +++   +N     EA+    +M  +G 
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+  + +S   AC +L     GK++   A +   L  NS V ++++ M+     +E  
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDA 427

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +R F+ +S+K +  +N  + G  +N   E+A  L  ++ E   L  +A T +S++     
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVAN 486

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +    E IH   +KLGL  ++ V NAL+ MYS+ G I+ +  +F+ ME R+ +SW +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ITG+    +HG A+ +L     M EE                KPN +T + +L  C  + 
Sbjct: 547 ITGF---AKHGFAIRVLETFNQMIEEG--------------VKPNEVTYVAILSACSHVG 589

Query: 519 ALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            +++G +  ++    + +   +   + +VD+  + G L  A    + MP + +V+ W   
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIALFAACSHSGMVSEGMDLFYK 635
           + A  +H   +     L  + A   +  E+ PNE   +I L    + +G   E  ++  K
Sbjct: 650 LGACRVHSNTE-----LGKLAAR--KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702

Query: 636 MKD 638
           MK+
Sbjct: 703 MKE 705


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 305/881 (34%), Positives = 478/881 (54%), Gaps = 36/881 (4%)

Query: 7   CLTLLPSP----PLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAI 62
           C  LL SP    PL  L        +A  +      T+   SW+  +   +++    EAI
Sbjct: 140 CHGLLCSPIISNPLIGLYAKNGLIISARKV-FDNLCTKDSVSWVAMISGFSQNGYEEEAI 198

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
             + EM  + I P  + F +VL     I+   +G+Q+HA V KYG  L +  V N LV +
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY-VCNALVTL 257

Query: 123 YGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           Y +   +     KVF ++  KD+VS+NS+I+ L + G  D ALE F  M    ++P   T
Sbjct: 258 YSRM-PNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFK 241
           + S+  AC++      L  G Q+H   ++ G  +  I+  AL+ +Y     +  A  +F 
Sbjct: 317 VASLLSACAS---NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           + +  ++V WN ++ +  + D   E+    RQM ++G+ P+  +  S+L  C+ +  LD 
Sbjct: 374 TAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDL 433

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G++IH   ++      N +V S L+DMY    +++    +   +++  +  W A+I+GY 
Sbjct: 434 GEQIHTQVIKTGFQF-NVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           Q+    EAL  F +M    G+  +    SS + AC   +A      IH  +   G   D 
Sbjct: 493 QHNLFAEALKHFKEMLN-RGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + NAL+ +Y+R GRI+ +   F+ ++ +D++SWN +I+G+   G   DAL +  +M   
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRA 611

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
           + E                  +  T  + +     ++ + +GK+IHA  I+    +D+ V
Sbjct: 612 KLE-----------------ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEV 654

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +AL+  YAKCG +  ARR F  MP +N ++WN +I  Y  HG G E + L + M     
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKM----K 710

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
           + GE+ PN VTF+ + +ACSH G+V++G+  F  M  ++G+ P P HYACVVDL+ RAG 
Sbjct: 711 QVGEM-PNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGF 769

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +  A + I  MP E D A  W +LL AC +H+NVE+GE AAQ+L  LEP+ ++ YVLLSN
Sbjct: 770 LSRARKFIEEMPIEPD-ATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSN 828

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           +Y+ +  WD     R+ M+  GV+KEPG SWIE  + +H F  GD  H  +++++ FL  
Sbjct: 829 MYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAE 888

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L+++  + GY  D   +L++V +E+K+  +  HSEKLAI FG+L+      I V KNLRV
Sbjct: 889 LNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRV 948

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   KF+SKI +R II+RD  RFHHF+ G CSC DYW
Sbjct: 949 CKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 162/590 (27%), Positives = 282/590 (47%), Gaps = 37/590 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K++H  ++K G+G  SV + N LV++Y   G D+  V KVF+ +  +   SW+ +I+   
Sbjct: 30  KKLHGKILKLGFGNESV-LCNKLVDVYFALG-DLDGVVKVFEDMPNRSVRSWDKIISGFM 87

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW- 215
                +  L+ F  M+  NV P+  +  SV  ACS    R G+R   Q+H   +  G   
Sbjct: 88  EKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSG--HRIGIRYAEQIHARIICHGLLC 145

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  I N L+ +YAK G +  A+ +F +   +D VSW  ++S  SQN    EA+    +M 
Sbjct: 146 SPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMH 205

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             GI P     +SVL  C+ +++ D G+++HA   +    ++ ++V +ALV +Y      
Sbjct: 206 TAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE-TYVCNALVTLYSRMPNF 264

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               +VF  +  K    +N++I+G  Q  + + AL LF KM+    L P+  T++S++ A
Sbjct: 265 VSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR-DYLKPDCVTVASLLSA 323

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C  + A    E +H + IK G+  D  V+ AL+D+Y     I+ +  +F   +  + V W
Sbjct: 324 CASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLW 383

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N M+  +       ++  + R+MQ                 +    PN  T  ++L  C 
Sbjct: 384 NVMLVAFGKLDNLSESFRIFRQMQ-----------------IKGLIPNQFTYPSILRTCT 426

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           ++ AL  G++IH   I+     +V V S L+DMYAK G L+ A  +   +   +V++W  
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTA 486

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I  Y  H    E L+  K M+  G     ++ + + F +  +AC+    +++G  + + 
Sbjct: 487 LISGYAQHNLFAEALKHFKEMLNRG-----IQSDNIGFSSAISACAGIQALNQGRQI-HA 540

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
                G          +V L  R G++++AY        EF+K  A  S+
Sbjct: 541 QSYVSGYSEDLSIGNALVSLYARCGRIKEAYL-------EFEKIDAKDSI 583



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 32/303 (10%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E  G+  N  T   ++  C+ S +  + + +HG  +KLG G +  + N L+D+Y  +G +
Sbjct: 2   EHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDL 61

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           +    +F+DM  R   SW+ +I+G+                    E+K  N V DL   +
Sbjct: 62  DGVVKVFEDMPNRSVRSWDKIISGFM-------------------EKKMSNRVLDLFSCM 102

Query: 498 LRPK--PNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           +     P  I+  +VL  C G    +   ++IHA  I + L    ++ + L+ +YAK G 
Sbjct: 103 IEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGL 162

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  AR+VFD +  ++ ++W  +I  +  +G  +E + L   M   G     + P    F 
Sbjct: 163 IISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAG-----IFPTPYVFS 217

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
           ++ + C+   +   G  L + +   YG   S + Y C  +V L  R      A ++ + M
Sbjct: 218 SVLSGCTKIKLFDVGEQL-HALVFKYG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274

Query: 673 PPE 675
             +
Sbjct: 275 QSK 277


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 321/854 (37%), Positives = 476/854 (55%), Gaps = 48/854 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + SW   + +     Q + AI  +  M +  ++ D   F AVLKA A + DLS G+
Sbjct: 89  EVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGR 148

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IHA +V+ G    SV +AN L+++YG CG  +     +F+++ E+D VSWN+ IA   +
Sbjct: 149 SIHAWIVESGLKGKSV-LANLLLHIYGSCGC-VASAMLLFEKM-ERDLVSWNAAIAANAQ 205

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G   +ALE F+ M    V P+  TLV     C+ +      R  + +H      G   T
Sbjct: 206 SGDLGIALELFQRMQLEGVRPARITLVIALTVCATI------RQAQAIHFIVRESGLEQT 259

Query: 218 FIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            +++ AL + YA+LG +  AK +F    +RD+VSWN ++ + +Q+    EA +   +M  
Sbjct: 260 LVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH 319

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI P  V++ +    CS L     G+ IH  AL   +  D   +G+AL+DMY  C   E
Sbjct: 320 EGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRD-IVLGNALLDMYTRCGSPE 375

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F  I    ++ WN MI G  Q    + A+ LF +M+ + G+ P   T  +++ A 
Sbjct: 376 EARHLFKRIPCNAVS-WNTMIAGSSQKGQMKRAVELFQRMQ-LEGMAPVRATYLNLLEAV 433

Query: 397 V----RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVR 450
                 + A  +   +H   +  G   +  +  A++ MY+  G I+ +   F    ME R
Sbjct: 434 ASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDR 493

Query: 451 -DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            D VSWN +I+  +  G    AL   R M             DL        PN IT + 
Sbjct: 494 HDVVSWNAIISSLSQHGHGKRALGFFRRM-------------DLHGVA----PNQITCVA 536

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-R 568
           VL  C   +AL +G+ +H +   + + +++ V +AL  MY +CG L  AR +F+ + V R
Sbjct: 537 VLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           +V+ +N +I AY  +G   E L+L   M  EGSR     P+E +F+++ +ACSH G+  E
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSR-----PDEQSFVSVLSACSHGGLADE 651

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G ++F  M+  YGI PS DHYAC VD+LGRAG + DA +LI  M  +      W +LLGA
Sbjct: 652 GWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVK-PTVLVWKTLLGA 710

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR +++V+ G +A   +  L+P   S YV+LSNI + A  WD+A +VR +M+  G+RKE 
Sbjct: 711 CRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEA 770

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE    +H+F+AGD SH +SE+++  LE L   +R+ GYVPDT  VL  V+E EKE
Sbjct: 771 GKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKE 830

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            LLC HSE+LAIA G++++    T+RV KNLRVC DCH ATKFISKI ++EI++RD  RF
Sbjct: 831 RLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRF 889

Query: 869 HHFKNGTCSCGDYW 882
           HHF +G+CSCGDYW
Sbjct: 890 HHFVDGSCSCGDYW 903



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 170/599 (28%), Positives = 290/599 (48%), Gaps = 40/599 (6%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+A    + LS G++IHA +V  G       + N L+ +Y KC S + DV +VF R+  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKCES-LGDVEEVFSRLEV 90

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D+ SW ++I      G+   A+  F  M    V   + T ++V  AC+ L     L  G
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG---DLSQG 147

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R +H   +  G +  + + N L+ +Y   G V  A  LF+  E RDLVSWN  +++ +Q+
Sbjct: 148 RSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQS 206

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                A+   ++M L G++P  +++   L  C+    +   + IH + +R   L     V
Sbjct: 207 GDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIH-FIVRESGLEQTLVV 262

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +AL   Y     +   + VFD  +++ +  WNAM+  Y Q+ +  EA +LF +M    G
Sbjct: 263 STALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH-EG 321

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + P+  T+ +    C    +      IHG A++ GL RD  + NAL+DMY+R G  E ++
Sbjct: 322 ISPSKVTLVNASTGC---SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F  +   + VSWNTMI G +  GQ   A+ L + MQ       R    +L E V    
Sbjct: 379 HLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNP 437

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
             +              A+A+G+++H+  +    A++  +G+A+V MYA CG ++ A   
Sbjct: 438 EEA-------------RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAAS 484

Query: 562 FD---LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           F    +    +V++WN II +   HG G+  L   + M   G     V PN++T +A+  
Sbjct: 485 FQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG-----VAPNQITCVAVLD 539

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           AC+ +  ++EG ++ +      G+E +      +  + GR G +E A ++   +  E D
Sbjct: 540 ACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERD 597


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 302/728 (41%), Positives = 436/728 (59%), Gaps = 45/728 (6%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNA 222
           AL AF  M  +   P   T  S+   C+    R  L  GR VH   + R  +       A
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAA---RGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
           L  MYAK  R  DA+ +F     RD V+WN +V+  ++N     A+ M +R     G +P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYCNCREVECGR 339
           D +++ SVLPAC++   L   +E HA+A+R+ +  L++   V +A++D YC C ++   R
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVN---VATAILDAYCKCGDIRAAR 216

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD++  K    WNAMI GY QN    EAL LF +M E  G+     ++ + + AC   
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE-EGVDVTDVSVLAALQACGEL 275

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
               +   +H   +++GL  +  V NAL+ MYS+  R++++  +FD+++ R  VSWN MI
Sbjct: 276 GCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMI 335

Query: 460 TGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            G   C Q+G   DA+ L   MQ         NV          KP+S TL++V+P    
Sbjct: 336 LG---CAQNGCSEDAVRLFTRMQ-------LENV----------KPDSFTLVSVIPALAD 375

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           +S   + + IH Y+IR  L  DV V +AL+DMYAKCG +N AR +F+    R+VITWN +
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  YG HG G+  +EL + M + G     + PNE TF+++ +ACSH+G+V EG + F  M
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIG-----IVPNETTFLSVLSACSHAGLVDEGREYFTSM 490

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQN 694
           K+DYG+EP  +HY  +VDLLGRAGK+++A+  I  MP  P     GA   +LGAC++H+N
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGA---MLGACKLHKN 547

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           VE+ E +AQ +F L P    ++VLL+NIY++A +W     VR  M++ G++K PG S I+
Sbjct: 548 VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
             +EIH F +G  +HQQ+++++  L  L E ++  GYVPDT  + H+V ++ K  LL  H
Sbjct: 608 LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTH 666

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLAIAFG++ T PGTTI++ KNLRVCNDCH ATK IS +  REII+RD++RFHHFK+G
Sbjct: 667 SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 727 KCSCGDYW 734



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 249/522 (47%), Gaps = 27/522 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR+ A  +    A+ +++ M+ +   P    F ++LK  A   DL+ G+ +HA +   G 
Sbjct: 31  LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE-A 167
             S    A  L NMY KC     D  +VFDR+  +D+V+WN+++A   R G   +A+E  
Sbjct: 91  D-SEALAATALANMYAKCRRPA-DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
            RM       P S TLVSV       +    L   R+ H  ++R G E    +  A++  
Sbjct: 149 VRMQEEEGERPDSITLVSV---LPACANARALAACREAHAFAIRSGLEELVNVATAILDA 205

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G +  A+ +F     ++ VSWN ++   +QN    EA+    +M   G+    VS+
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSV 265

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            + L AC  L  LD G  +H   +R   L  N  V +AL+ MY  C+ V+    VFD + 
Sbjct: 266 LAALQACGELGCLDEGMRVHELLVRIG-LDSNVSVMNALITMYSKCKRVDLASHVFDELD 324

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            +    WNAMI G  QN   E+A+ LF +M ++  + P++ T+ SV+PA           
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRM-QLENVKPDSFTLVSVIPALADISDPLQAR 383

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IHG++I+L L +D YV  AL+DMY++ GR+ I++ +F+    R  ++WN MI GY   G
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
               A+ L  EM++                 +   PN  T ++VL  C     + +G+E 
Sbjct: 444 FGKAAVELFEEMKS-----------------IGIVPNETTFLSVLSACSHAGLVDEGREY 486

Query: 527 HAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
                 +  L   +     +VD+  + G L+ A      MP+
Sbjct: 487 FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPM 528



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 225/462 (48%), Gaps = 24/462 (5%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQDLSLGK 97
            R + +W   +   AR+   R A+   + M   + + PD+    +VL A A  + L+  +
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           + HA  ++ G     V VA  +++ Y KCG D+     VFD +  K+ VSWN+MI    +
Sbjct: 182 EAHAFAIRSGLE-ELVNVATAILDAYCKCG-DIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    AL  F  M+   V+ +  ++++   AC  L   D    G +VH   +R+G + N
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE---GMRVHELLVRIGLDSN 296

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             +MNAL+ MY+K  RVD A  +F   + R  VSWN ++   +QN    +AV    +M L
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KPD  ++ SV+PA + +      + IH Y++R   L  + +V +AL+DMY  C  V 
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVN 415

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F+   ++ +  WNAMI GYG + + + A+ LF +M+ + G+ PN TT  SV+ AC
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI-GIVPNETTFLSVLSAC 474

Query: 397 VRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             +       E F   +  +G    L  G + Y    ++D+  R G+++ +      M +
Sbjct: 475 SHAGLVDEGREYFTSMKEDYG----LEPGMEHY--GTMVDLLGRAGKLDEAWAFIQKMPM 528

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
              +S    + G   C  H +  +     Q + E   +  VY
Sbjct: 529 DPGLSVYGAMLG--ACKLHKNVELAEESAQKIFELGPQEGVY 568


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 302/728 (41%), Positives = 436/728 (59%), Gaps = 45/728 (6%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNA 222
           AL AF  M  +   P   T  S+   C+    R  L  GR VH   + R  +       A
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAA---RGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
           L  MYAK  R  DA+ +F     RD V+WN +V+  ++N     A+ M +R     G +P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYCNCREVECGR 339
           D +++ SVLPAC++   L   +E HA+A+R+ +  L++   V +A++D YC C ++   R
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVN---VATAILDAYCKCGDIRAAR 216

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD++  K    WNAMI GY QN    EAL LF +M E  G+     ++ + + AC   
Sbjct: 217 VVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE-EGVDVTDVSVLAALQACGEL 275

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
               +   +H   +++GL  +  V NAL+ MYS+  R++++  +FD+++ R  VSWN MI
Sbjct: 276 GCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMI 335

Query: 460 TGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            G   C Q+G   DA+ L   MQ         NV          KP+S TL++V+P    
Sbjct: 336 LG---CAQNGCSEDAVRLFTRMQ-------LENV----------KPDSFTLVSVIPALAD 375

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           +S   + + IH Y+IR  L  DV V +AL+DMYAKCG +N AR +F+    R+VITWN +
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  YG HG G+  +EL + M + G     + PNE TF+++ +ACSH+G+V EG + F  M
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIG-----IVPNETTFLSVLSACSHAGLVDEGREYFTSM 490

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQN 694
           K+DYG+EP  +HY  +VDLLGRAGK+++A+  I  MP  P     GA   +LGAC++H+N
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGA---MLGACKLHKN 547

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           VE+ E +AQ +F L P    ++VLL+NIY++A +W     VR  M++ G++K PG S I+
Sbjct: 548 VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
             +EIH F +G  +HQQ+++++  L  L E ++  GYVPDT  + H+V ++ K  LL  H
Sbjct: 608 LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTH 666

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLAIAFG++ T PGTTI++ KNLRVCNDCH ATK IS +  REII+RD++RFHHFK+G
Sbjct: 667 SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 727 KCSCGDYW 734



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 244/510 (47%), Gaps = 27/510 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+ +++ M+ +   P    F ++LK  A   DL+ G+ +HA +   G   S    A  L 
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGID-SEALAATALA 101

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE-AFRMMLYSNVEPS 179
           NMY KC     D  +VFDR+  +D+V+WN+++A   R G   +A+E   RM       P 
Sbjct: 102 NMYAKCRRPA-DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           S TLVSV       +    L   R+ H  ++R G E    +  A++  Y K G +  A+ 
Sbjct: 161 SITLVSV---LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F     ++ VSWN ++   +QN    EA+    +M   G+    VS+ + L AC  L  
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           LD G  +H   +R   L  N  V +AL+ MY  C+ V+    VFD +  +    WNAMI 
Sbjct: 278 LDEGMRVHELLVRIG-LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMIL 336

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           G  QN   E+A+ LF +M ++  + P++ T+ SV+PA            IHG++I+L L 
Sbjct: 337 GCAQNGCSEDAVRLFTRM-QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLD 395

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           +D YV  AL+DMY++ GR+ I++ +F+    R  ++WN MI GY   G    A+ L  EM
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LAT 537
           ++                 +   PN  T ++VL  C     + +G+E       +  L  
Sbjct: 456 KS-----------------IGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEP 498

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +     +VD+  + G L+ A      MP+
Sbjct: 499 GMEHYGTMVDLLGRAGKLDEAWAFIQKMPM 528



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 225/462 (48%), Gaps = 24/462 (5%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQDLSLGK 97
            R + +W   +   AR+   R A+   + M   + + PD+    +VL A A  + L+  +
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           + HA  ++ G     V VA  +++ Y KCG D+     VFD +  K+ VSWN+MI    +
Sbjct: 182 EAHAFAIRSGLE-ELVNVATAILDAYCKCG-DIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    AL  F  M+   V+ +  ++++   AC  L   D    G +VH   +R+G + N
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE---GMRVHELLVRIGLDSN 296

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             +MNAL+ MY+K  RVD A  +F   + R  VSWN ++   +QN    +AV    +M L
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KPD  ++ SV+PA + +      + IH Y++R   L  + +V +AL+DMY  C  V 
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVN 415

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F+   ++ +  WNAMI GYG + + + A+ LF +M+ + G+ PN TT  SV+ AC
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI-GIVPNETTFLSVLSAC 474

Query: 397 VRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             +       E F   +  +G    L  G + Y    ++D+  R G+++ +      M +
Sbjct: 475 SHAGLVDEGREYFTSMKEDYG----LEPGMEHY--GTMVDLLGRAGKLDEAWAFIQKMPM 528

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
              +S    + G   C  H +  +     Q + E   +  VY
Sbjct: 529 DPGLSVYGAMLG--ACKLHKNVELAEESAQKIFELGPQEGVY 568


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 320/883 (36%), Positives = 480/883 (54%), Gaps = 87/883 (9%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +LR+ A+S+Q  +  +S    +  +I P     P + K     + +S  K IH  ++ +G
Sbjct: 7   TLRAAAKSHQHLK--VSLFSTSALEITP-----PFIHKC----KTISQVKLIHQKLLSFG 55

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWDLAL 165
             + ++ + + L++ Y   G  +     +  R    D     WNS+I +    G+ +  L
Sbjct: 56  --ILTLNLTSHLISTYISLGC-LSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCL 112

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALM 224
            +F +M   +  P ++T   V  AC  +S    +R G   H  S   G   N F+ NAL+
Sbjct: 113 SSFCLMHSLSWTPDNYTFPFVFKACGEIS---SVRCGDSSHALSRVTGFMSNVFVGNALV 169

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDG 283
           AMY++ G + DA+ +F      D+VSWN+I+ S ++  K   A+ MF +     G +PD 
Sbjct: 170 AMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDD 229

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           +++ +VLP C+ +     GK+ H +A+ ++ +I N FVG+ LVDMY     ++    VF 
Sbjct: 230 ITLVNVLPPCASVGTRSLGKQFHGFAVTSE-MIQNMFVGNCLVDMYAKFGMMDEANTVFS 288

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE------------------------- 378
            +  K +  WNAM+ GY Q    E+A+ LF +M+E                         
Sbjct: 289 NMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYE 348

Query: 379 ---------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-------GLGRDRY 422
                     +G+ PN  T+ SV+  C    A    + IH +AIK        G G +  
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENM 408

Query: 423 VQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
           V N L+DMY++  +++I++ +FD +  + RD V+W  MI GY+   QHGDA   L  +  
Sbjct: 409 VINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYS---QHGDANKALELLSE 465

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML-ATDV 539
           M EE              + +PN+ T+   L  C +L+AL+ GK+IHAYA+RN   A  +
Sbjct: 466 MFEED------------CQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPL 513

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            V + L+DMYAKCG +  AR VFD M  +N +TW  ++  YGMHG G+E L + + M   
Sbjct: 514 FVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI 573

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G      K + VT + +  ACSHSGM+ +GM+ F +MK D+G+ P P+HYAC+VDLLGRA
Sbjct: 574 G-----FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRA 628

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G++  A +LI  MP E      W +LL  CRIH  VE+GE AA+ +  L  +    Y LL
Sbjct: 629 GRLNAALRLIEEMPMEPPPV-VWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLL 687

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SN+Y++A  W     +R  M+  G++K PGCSW+E       F  GD +H  +++++  L
Sbjct: 688 SNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
            +  +R++  GYVP+T   LH+V++EEK+ LL  HSEKLA+A+GIL TP G  IR+ KNL
Sbjct: 748 SDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH A  ++S+I   EIILRD  RFHHFKNG CSC  YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 189/595 (31%), Positives = 287/595 (48%), Gaps = 81/595 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +RS   + +  + + S+  M      PDN+ FP V KA   I  +  G   HA   
Sbjct: 95  WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +S+V V N LV MY +CGS + D  KVFD +   D VSWNS+I +  + GK  +A
Sbjct: 155 VTGF-MSNVFVGNALVAMYSRCGS-LSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMA 212

Query: 165 LEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           LE F  M       P   TLV+V   C+++  R    LG+Q HG ++      N F+ N 
Sbjct: 213 LEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRS---LGKQFHGFAVTSEMIQNMFVGNC 269

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL----------- 271
           L+ MYAK G +D+A T+F +   +D+VSWN +V+  SQ  +F +AV              
Sbjct: 270 LVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329

Query: 272 ------------------------RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
                                   RQM   GIKP+ V++ SVL  C+ +  L  GKEIH 
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 308 YA------LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALWNAMITG 359
           YA      LR +   D + V + L+DMY  C++V+  R +FD +S K+  +  W  MI G
Sbjct: 390 YAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGG 449

Query: 360 YGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           Y Q+    +AL L  +M EE     PNA T+S  + AC    A    + IH +A++    
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQN 509

Query: 419 R-DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
               +V N L+DMY++ G I  ++ +FD+M  ++ V+W +++TGY + G   +AL +  E
Sbjct: 510 AVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEE 569

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M+ +         + LD          +TL+ VL  C     + +G E       N + T
Sbjct: 570 MRRIG--------FKLD---------GVTLLVVLYACSHSGMIDQGMEYF-----NRMKT 607

Query: 538 DVVVG------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           D  V       + LVD+  + G LN A R+ + MP+    + W  ++    +HG+
Sbjct: 608 DFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGK 662



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 146/276 (52%), Gaps = 22/276 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W  ++   A+     EA+    +M  S I+P+     +VL   A +  L  GK+IH + 
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391

Query: 104 VKY-------GYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRIT--EKDQVSWNSMIA 153
           +KY       G+G  ++ + N L++MY KC     D+ + +FD ++  E+D V+W  MI 
Sbjct: 392 IKYPMDLRKNGHGDENMVI-NQLIDMYAKCKK--VDIARAMFDSLSPKERDVVTWTVMIG 448

Query: 154 TLCRFGKWDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
              + G  + ALE    M   + +  P++FT+    +AC++L+    L +G+Q+H  +LR
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA---ALSIGKQIHAYALR 505

Query: 212 VGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
             + N    F+ N L+ MYAK G + DA+ +F +  +++ V+W ++++    +    EA+
Sbjct: 506 -NQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEAL 564

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
               +M   G K DGV++  VL ACSH  M+D G E
Sbjct: 565 GIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/681 (40%), Positives = 410/681 (60%), Gaps = 31/681 (4%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
            + +Y+  G +  A+ LF      DL +W  ++S+L+++ + LEA+ +      +  ++P
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D + + SV  AC+ L  +   K +H  A+R     D   +G+AL+DMY  CR  E  R V
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSD-VLLGNALIDMYGKCRCSEGARLV 135

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  + +  W +M + Y       EAL  F KM  + G  PN+ T+SS++PAC   + 
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMG-LNGERPNSVTVSSILPACTDLKD 194

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +HG  ++ G+G + +V +AL++MY+    I  ++ +FD M  RDTVSWN +IT 
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254

Query: 462 YTICGQHGDALMLLREM--------------------QNMEEEKNRNNVYDLDETVLRPK 501
           Y +  +    L +   M                    QN   EK    +  +  +    K
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF--K 312

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN IT+ +VLP C  L +L  GK+IH Y  R+    D+   +ALV MYAKCG L  +RRV
Sbjct: 313 PNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRV 372

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F +M  R+ ++WN +I+A  MHG G+E L L + MV  G     V+PN VTF  + + CS
Sbjct: 373 FSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG-----VRPNSVTFTGVLSGCS 427

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           HS +V EG+ +F  M  D+ +EP  DH++C+VD+L RAG++E+AY+ I  MP E   AGA
Sbjct: 428 HSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIE-PTAGA 486

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLG CR+++NVE+G IAA  LF +E D   +YVLLSNI  SA+LW +A + RK M++
Sbjct: 487 WGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRD 546

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            GV K PGCSWI+  + +H F+ GD S+ QS++++ FL+ + E+MR  GY+P+T  VL +
Sbjct: 547 RGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQD 606

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           V++EEKE +LC HSEKLA+AFG+LN    ++IRV KNLR+C DCH A KF++KI   +II
Sbjct: 607 VDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKII 666

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFHHF++G CSC D+W
Sbjct: 667 VRDSLRFHHFRDGLCSCQDFW 687



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 246/490 (50%), Gaps = 59/490 (12%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +A   + +Y   G D+     +FD+I + D  +W  +I+ L + G+   A++ +    + 
Sbjct: 13  LALKFIKVYSNSG-DLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 175 N-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGR 232
           N VEP    L+SVA AC++L  RD +   ++VH +++R G  +  ++ NAL+ MY K   
Sbjct: 72  NCVEPDKLLLLSVAKACASL--RDVMN-AKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC 128

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
            + A+ +F+    RD++SW ++ S         EA+   R+M L G +P+ V+++S+LPA
Sbjct: 129 SEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPA 188

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L+ L +G+E+H + +RN  +  N FV SALV+MY +C  +   + VFD +S +    
Sbjct: 189 CTDLKDLKSGREVHGFVVRNG-MGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVS 247

Query: 353 WNAMITGYGQNEYDEEALMLFIKM----------------------------------EE 378
           WN +IT Y  N+  E+ L +F +M                                   +
Sbjct: 248 WNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQ 307

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            +G  PN  T++SV+PAC   E+    + IHG+  +    +D     AL+ MY++ G +E
Sbjct: 308 NSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLE 367

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           +S+ +F  M  RDTVSWNTMI   ++ G   +AL+L REM              +D  V 
Sbjct: 368 LSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREM--------------VDSGV- 412

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNF 557
             +PNS+T   VL GC     + +G  I     R+  +  D    S +VD+ ++ G L  
Sbjct: 413 --RPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEE 470

Query: 558 ARRVFDLMPV 567
           A      MP+
Sbjct: 471 AYEFIKKMPI 480



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 224/462 (48%), Gaps = 56/462 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   + +  +  +  EAI  Y +    + ++PD     +V KA A ++D+   K++H  
Sbjct: 44  TWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHED 103

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +++G+  S V + N L++MYGKC         VF+ +  +D +SW SM +     G   
Sbjct: 104 AIRFGF-CSDVLLGNALIDMYGKCRCSE-GARLVFEGMPFRDVISWTSMASCYVNCGLLR 161

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL AFR M  +   P+S T+ S+  AC++L     L+ GR+VHG  +R G   N F+ +
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPACTDLK---DLKSGREVHGFVVRNGMGGNVFVSS 218

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL----------------------- 258
           AL+ MYA    +  A+ +F S   RD VSWN ++++                        
Sbjct: 219 ALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGL 278

Query: 259 ------------SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
                        QN +  +A+  L +M   G KP+ ++I SVLPAC++LE L  GK+IH
Sbjct: 279 NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIH 338

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            Y  R+    D +   +ALV MY  C ++E  RRVF  ++ +    WN MI     +   
Sbjct: 339 GYIFRHWFFQDLT-TTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ-- 424
           EEAL+LF +M + +G+ PN+ T + V+  C  S    +     G  I   + RD  V+  
Sbjct: 398 EEALLLFREMVD-SGVRPNSVTFTGVLSGCSHSRLVDE-----GLLIFDSMSRDHSVEPD 451

Query: 425 ----NALMDMYSRMGRIEISKTIFDDMEVRDTV-SWNTMITG 461
               + ++D+ SR GR+E +      M +  T  +W  ++ G
Sbjct: 452 ADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 308/831 (37%), Positives = 444/831 (53%), Gaps = 84/831 (10%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +S  ++   +V  Y  CG+  + +  V +R+T    V WN +I    + G+ D A+    
Sbjct: 86  ISPRSLGTGVVASYLACGATDYALL-VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            ML +   P  FTL  V  AC  L      R G   HG     G E N FI NAL+AMY+
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELP---SYRCGSAFHGLICCNGFESNVFICNALVAMYS 201

Query: 229 KLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL------RGI 279
           + G +++A  +F     R   D++SWN+IVS+  ++     A+    +M L         
Sbjct: 202 RCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNE 261

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           + D +SI ++LPAC  L+ +   KE+H  A+RN    D  FVG+AL+D Y  C  +E   
Sbjct: 262 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPD-VFVGNALIDAYAKCGLMENAV 320

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE--------------------- 378
           +VF+ +  K +  WNAM+ GY Q+   E A  LF  M +                     
Sbjct: 321 KVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRG 380

Query: 379 -------------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL---------- 415
                         +G  PN  T+ SV+ AC    AF     IH +++K           
Sbjct: 381 CSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG 440

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVRDTVSWNTMITGYTICGQHGDALM 473
           G   D  V NAL+DMYS+    + +++IFDD  +E R+ V+W  MI G+   G   DAL 
Sbjct: 441 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 500

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  EM +          Y +        PN+ T+  +L  C  L+A+  GK+IHAY +R+
Sbjct: 501 LFVEMIS--------EPYGV-------APNAYTISCILMACAHLAAIRIGKQIHAYVLRH 545

Query: 534 ML--ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
               ++   V + L+DMY+KCG ++ AR VFD M  ++ I+W  ++  YGMHG G E L+
Sbjct: 546 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 605

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           +   M     R     P+++TF+ +  ACSH GMV +G+  F  M  DYG+ P  +HYAC
Sbjct: 606 IFDKM-----RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 660

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
            +DLL R+G+++ A++ +  MP E   A  W +LL ACR+H NVE+ E A   L  +  +
Sbjct: 661 AIDLLARSGRLDKAWRTVKDMPME-PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 719

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
               Y L+SNIY++A  W     +R  MK+ G++K PGCSW++       F  GD SH  
Sbjct: 720 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPL 779

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           S Q++  LE+L +R++  GYVP+T+  LH+V+EEEK  LL  HSEKLA+A+G+L T PG 
Sbjct: 780 SPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGC 839

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IR+ KNLRVC DCH A  +ISKI   EI++RD  RFHHFKNG+CSCG YW
Sbjct: 840 PIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 180/623 (28%), Positives = 292/623 (46%), Gaps = 94/623 (15%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R   +  +   AI     M R+  +PD+F  P VLKA   +     G   H  + 
Sbjct: 123 WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 182

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
             G+  S+V + N LV MY +CGS + +   +FD IT++   D +SWNS+++   +    
Sbjct: 183 CNGFE-SNVFICNALVAMYSRCGS-LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 240

Query: 162 DLALEAF-RMMLYSNVEPSS-----FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             AL+ F +M L  + +P++      ++V++  AC +L     +   ++VHGN++R G +
Sbjct: 241 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK---AVPQTKEVHGNAIRNGTF 297

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF---------- 264
            + F+ NAL+  YAK G +++A  +F   E +D+VSWN +V+  SQ+  F          
Sbjct: 298 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 357

Query: 265 -------------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                                     EA+   RQM   G  P+ V+I SVL AC+ L   
Sbjct: 358 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAF 417

Query: 300 DTGKEIHAYALRNDIL-IDNSFVG--------SALVDMYCNCREVECGRRVFDFI--SDK 348
             G EIHAY+L+N +L +DN F G        +AL+DMY  CR  +  R +FD I   ++
Sbjct: 418 SQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 477

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
            +  W  MI G+ Q     +AL LF++M  E  G+ PNA T+S ++ AC    A    + 
Sbjct: 478 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 537

Query: 408 IHGHAIKLGLGRDRY------VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           IH + ++      RY      V N L+DMYS+ G ++ ++ +FD M  +  +SW +M+TG
Sbjct: 538 IHAYVLR----HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 593

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y + G+  +AL +  +M+                      P+ IT + VL  C     + 
Sbjct: 594 YGMHGRGSEALDIFDKMRKAGF-----------------VPDDITFLVVLYACSHCGMVD 636

Query: 522 KG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G     + +    L       +  +D+ A+ G L+ A R    MP+    + W  ++ A
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696

Query: 580 YGMHGE---GQEVLELLKNMVAE 599
             +H      +  L  L  M AE
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAE 719



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 20/275 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   ++     EA+  + +M  S   P+     +VL A A +   S G +IHA+ 
Sbjct: 368 TWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 427

Query: 104 VK---------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMI 152
           +K         +G     + V N L++MY KC S       +FD I   E++ V+W  MI
Sbjct: 428 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS-FKAARSIFDDIPLEERNVVTWTVMI 486

Query: 153 ATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
               ++G  + AL+ F  M+     V P+++T+  + +AC++L+    +R+G+Q+H   L
Sbjct: 487 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA---AIRIGKQIHAYVL 543

Query: 211 RVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           R   + +   F+ N L+ MY+K G VD A+ +F S   +  +SW ++++    + +  EA
Sbjct: 544 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 603

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +    +M   G  PD ++   VL ACSH  M+D G
Sbjct: 604 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 301/824 (36%), Positives = 478/824 (58%), Gaps = 33/824 (4%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  +  M    ++ +   F  VL +V     L  GK IH+ V +  + L  V V   LV
Sbjct: 144 AVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLD-VFVNTALV 202

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           N Y KCGS + D  KVFD +  +   +WNSMI+      +   A   F+ M         
Sbjct: 203 NTYTKCGS-LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDR 261

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
            T +S+  AC N    + L+ G+ V  + S    E + F+  AL+ MYA+    +DA  +
Sbjct: 262 VTFLSILDACVN---PETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQV 318

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F   +  +L++W+ I+++ + +    EA+ + R M   GI P+ V+  S+L   +    L
Sbjct: 319 FGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 378

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           +    IH     +  L D + + +ALV++Y  C   +  R VFD +    +  WN+MI  
Sbjct: 379 EELSRIHLLITEHG-LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGI 437

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q E  ++AL LF  M++  G+ P+     +++ AC        ++ +H    + GLG 
Sbjct: 438 YVQCERHDDALQLFRTMQQ-QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGG 496

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
              VQ +L++MY++ G +++++ I  +M+ +   +WN +I GY + G+  +AL   +++Q
Sbjct: 497 SPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556

Query: 480 NMEEEKNRNNVYDLDETVLRPKP-NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                             L   P + +T ++VL  C + ++LA+GK IH+ A+   L +D
Sbjct: 557 ------------------LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 598

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V+V +AL +MY+KCG +  ARR+FD MP+R+ ++WN ++ AY  HGE +EVL+L++ M  
Sbjct: 599 VIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ 658

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           EG     VK N +TF+++ ++CSH+G+++EG   F+ +  D GIE   +HY C+VDLLGR
Sbjct: 659 EG-----VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGR 713

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AGK+++A + I+ MP E      W+SLLGACR+ ++++ G++AA  L  L+P  +S  V+
Sbjct: 714 AGKLQEAEKYISKMPLE-PGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVV 772

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSNIYS    W  A  +R+ M    V+K PG S I+  +++H+F   D SH ++ +++  
Sbjct: 773 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDK 832

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           +E L   MR+ GYVPDT  VLH+V+EE+KE+LL  HSEKLAIAFG+++TP  +++ + KN
Sbjct: 833 VEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKN 892

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH ATKFISKI  REI++RD  RFHHF++G+CSC DYW
Sbjct: 893 LRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 323/656 (49%), Gaps = 36/656 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + +    F+EA+  +  M    + P+     AVL +    ++L  G  +HA  
Sbjct: 25  SWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALS 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG-KWD 162
           ++ G+   +  VA  L+NMYGKCG+ + D   VF+ + EK+ V+WN+M+      G  W 
Sbjct: 85  LERGF-FQNTLVATALLNMYGKCGT-LLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWK 142

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE--WNTFIM 220
           LA+E F  ML   V+ +  T ++V    +++   D LR G+ +H + +R  E   + F+ 
Sbjct: 143 LAVELFTRMLLEGVKANVITFLNV---LNSVVDPDALRKGKFIH-SCVRESEHSLDVFVN 198

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+  Y K G + DA+ +F     R + +WN+++S+ S +++  EA    ++M   G +
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGER 258

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D V+  S+L AC + E L  GK +          +D  FVG+AL+ MY  CR  E   +
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELD-LFVGTALITMYARCRSPEDAAQ 317

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF  +    +  W+A+IT +  + +  EAL  F +M +  G+ PN  T  S++       
Sbjct: 318 VFGRMKQTNLITWSAIITAFADHGHCGEALRYF-RMMQQEGILPNRVTFISLLNGFTTPS 376

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
              +   IH    + GL     ++NAL+++Y R    + ++T+FD +E+ + +SWN+MI 
Sbjct: 377 GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIG 436

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y  C +H DAL L R MQ                     +P+ +  MT+L  C   S  
Sbjct: 437 IYVQCERHDDALQLFRTMQQQG-----------------IQPDRVNFMTILGACTIGSHG 479

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
              K +H     + L    +V ++LV+MYAK G L+ A  +   M  + +  WNV+I  Y
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            +HG  +E LE  + +  E      +  ++VTFI++  AC+ S  ++EG  + +    + 
Sbjct: 540 ALHGRSREALEAYQKLQLEA-----IPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVEC 593

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           G++        + ++  + G +E+A ++ + MP     A +W+ +L A   H   E
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSMENARRIFDSMP--IRSAVSWNGMLQAYAQHGESE 647



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 299/616 (48%), Gaps = 35/616 (5%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MY +CGS + D    F +I  ++ VSWN MI+    +  +  AL  F  ML   V P++ 
Sbjct: 1   MYSRCGS-LGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLF 240
           TLV+V  +C +      LR G  VH  SL  G + NT +  AL+ MY K G + DA+++F
Sbjct: 60  TLVAVLNSCGSFRE---LRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVF 116

Query: 241 KSFEDRDLVSWNTIVSSLS-QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           +   ++++V+WN ++   S Q   +  AV    +M L G+K + ++  +VL +    + L
Sbjct: 117 EEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDAL 176

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             GK IH+    ++  +D  FV +ALV+ Y  C  +   R+VFD +  + +  WN+MI+ 
Sbjct: 177 RKGKFIHSCVRESEHSLD-VFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y  +E   EA  +F +M++  G   +  T  S++ ACV  E     + +     +     
Sbjct: 236 YSISERSGEAFFIFQRMQQ-EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D +V  AL+ MY+R    E +  +F  M+  + ++W+ +IT +   G  G+AL   R MQ
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                          E +L   PN +T +++L G    S L +   IH     + L    
Sbjct: 355 Q--------------EGIL---PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTT 397

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + +ALV++Y +C   + AR VFD + + N+I+WN +I  Y       + L+L + M  +
Sbjct: 398 TMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQ 457

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     ++P+ V F+ +  AC+  G       L ++  ++ G+  SP     +V++  +A
Sbjct: 458 G-----IQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA 511

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL--LEPDVASHYV 717
           G+++ A  ++  M  +  +  AW+ L+    +H        A Q L L  +  D  +   
Sbjct: 512 GELDVAEVILQEMDEQ--QITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFIS 569

Query: 718 LLSNIYSSAQLWDKAM 733
           +L+   SS  L +  M
Sbjct: 570 VLNACTSSTSLAEGKM 585



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 47/265 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A   + REA+ +Y ++    I  D   F +VL A      L+ GK IH++ 
Sbjct: 531 AWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 590

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G   S V V N L NMY KCGS M +  ++FD +  +  VSWN M+    + G+ + 
Sbjct: 591 VECGLD-SDVIVKNALTNMYSKCGS-MENARRIFDSMPIRSAVSWNGMLQAYAQHGESEE 648

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            L+  R M    V+ +  T VSV  +CS+                               
Sbjct: 649 VLKLIRKMEQEGVKLNGITFVSVLSSCSH------------------------------- 677

Query: 224 MAMYAKLGRVDDAKTLFKSF-EDRDL----VSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                  G + +    F S   DR +      +  +V  L +  K  EA  ++ +M L  
Sbjct: 678 ------AGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPL-- 729

Query: 279 IKPDGVSIASVLPACSHLEMLDTGK 303
            +P  V+ AS+L AC   + LD GK
Sbjct: 730 -EPGIVTWASLLGACRVQKDLDRGK 753


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 308/831 (37%), Positives = 444/831 (53%), Gaps = 84/831 (10%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +S  ++   +V  Y  CG+  + +  V +R+T    V WN +I    + G+ D A+    
Sbjct: 93  ISPRSLGTGVVASYLACGATDYALL-VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            ML +   P  FTL  V  AC  L      R G   HG     G E N FI NAL+AMY+
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELP---SYRCGSAFHGLICCNGFESNVFICNALVAMYS 208

Query: 229 KLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL------RGI 279
           + G +++A  +F     R   D++SWN+IVS+  ++     A+    +M L         
Sbjct: 209 RCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNE 268

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           + D +SI ++LPAC  L+ +   KE+H  A+RN    D  FVG+AL+D Y  C  +E   
Sbjct: 269 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPD-VFVGNALIDAYAKCGLMENAV 327

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE--------------------- 378
           +VF+ +  K +  WNAM+ GY Q+   E A  LF  M +                     
Sbjct: 328 KVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRG 387

Query: 379 -------------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL---------- 415
                         +G  PN  T+ SV+ AC    AF     IH +++K           
Sbjct: 388 CSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG 447

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVRDTVSWNTMITGYTICGQHGDALM 473
           G   D  V NAL+DMYS+    + +++IFDD  +E R+ V+W  MI G+   G   DAL 
Sbjct: 448 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 507

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  EM +          Y +        PN+ T+  +L  C  L+A+  GK+IHAY +R+
Sbjct: 508 LFVEMIS--------EPYGV-------APNAYTISCILMACAHLAAIRIGKQIHAYVLRH 552

Query: 534 ML--ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
               ++   V + L+DMY+KCG ++ AR VFD M  ++ I+W  ++  YGMHG G E L+
Sbjct: 553 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 612

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           +   M     R     P+++TF+ +  ACSH GMV +G+  F  M  DYG+ P  +HYAC
Sbjct: 613 IFDKM-----RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 667

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
            +DLL R+G+++ A++ +  MP E   A  W +LL ACR+H NVE+ E A   L  +  +
Sbjct: 668 AIDLLARSGRLDKAWRTVKDMPME-PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 726

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
               Y L+SNIY++A  W     +R  MK+ G++K PGCSW++       F  GD SH  
Sbjct: 727 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPL 786

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           S Q++  LE+L +R++  GYVP+T+  LH+V+EEEK  LL  HSEKLA+A+G+L T PG 
Sbjct: 787 SPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGC 846

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IR+ KNLRVC DCH A  +ISKI   EI++RD  RFHHFKNG+CSCG YW
Sbjct: 847 PIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 180/623 (28%), Positives = 292/623 (46%), Gaps = 94/623 (15%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R   +  +   AI     M R+  +PD+F  P VLKA   +     G   H  + 
Sbjct: 130 WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 189

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
             G+  S+V + N LV MY +CGS + +   +FD IT++   D +SWNS+++   +    
Sbjct: 190 CNGFE-SNVFICNALVAMYSRCGS-LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 247

Query: 162 DLALEAF-RMMLYSNVEPSS-----FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             AL+ F +M L  + +P++      ++V++  AC +L     +   ++VHGN++R G +
Sbjct: 248 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK---AVPQTKEVHGNAIRNGTF 304

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF---------- 264
            + F+ NAL+  YAK G +++A  +F   E +D+VSWN +V+  SQ+  F          
Sbjct: 305 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 364

Query: 265 -------------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                                     EA+   RQM   G  P+ V+I SVL AC+ L   
Sbjct: 365 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAF 424

Query: 300 DTGKEIHAYALRNDIL-IDNSFVG--------SALVDMYCNCREVECGRRVFDFI--SDK 348
             G EIHAY+L+N +L +DN F G        +AL+DMY  CR  +  R +FD I   ++
Sbjct: 425 SQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 484

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
            +  W  MI G+ Q     +AL LF++M  E  G+ PNA T+S ++ AC    A    + 
Sbjct: 485 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 544

Query: 408 IHGHAIKLGLGRDRY------VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           IH + ++      RY      V N L+DMYS+ G ++ ++ +FD M  +  +SW +M+TG
Sbjct: 545 IHAYVLR----HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 600

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y + G+  +AL +  +M+                      P+ IT + VL  C     + 
Sbjct: 601 YGMHGRGSEALDIFDKMRKAGF-----------------VPDDITFLVVLYACSHCGMVD 643

Query: 522 KG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G     + +    L       +  +D+ A+ G L+ A R    MP+    + W  ++ A
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703

Query: 580 YGMHGE---GQEVLELLKNMVAE 599
             +H      +  L  L  M AE
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAE 726



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 20/275 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   ++     EA+  + +M  S   P+     +VL A A +   S G +IHA+ 
Sbjct: 375 TWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 434

Query: 104 VK---------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMI 152
           +K         +G     + V N L++MY KC S       +FD I   E++ V+W  MI
Sbjct: 435 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS-FKAARSIFDDIPLEERNVVTWTVMI 493

Query: 153 ATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
               ++G  + AL+ F  M+     V P+++T+  + +AC++L+    +R+G+Q+H   L
Sbjct: 494 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA---AIRIGKQIHAYVL 550

Query: 211 RVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           R   + +   F+ N L+ MY+K G VD A+ +F S   +  +SW ++++    + +  EA
Sbjct: 551 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 610

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +    +M   G  PD ++   VL ACSH  M+D G
Sbjct: 611 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 320/880 (36%), Positives = 476/880 (54%), Gaps = 87/880 (9%)

Query: 51  SEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
           + A+S+Q+ +  +S    +  +I P     P + K     + +S  K IH  ++ +G  +
Sbjct: 10  AAAKSHQYIK--VSLFSTSAPEITP-----PFIHKC----KTISQVKLIHQKLLSFG--I 56

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWDLALEAF 168
            ++ + + L++ Y   G  +     +  R    D     WNS+I +    G  +  L  F
Sbjct: 57  LTLNLTSHLISTYISVGC-LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF 115

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMY 227
            +M   +  P ++T   V  AC  +S    +R G   H  SL  G   N F+ NAL+AMY
Sbjct: 116 GLMHSLSWTPDNYTFPFVFKACGEIS---SVRCGESAHALSLVTGFISNVFVGNALVAMY 172

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSI 286
           ++   + DA+ +F      D+VSWN+I+ S ++  K   A+ MF R     G +PD +++
Sbjct: 173 SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITL 232

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            +VLP C+ L     GK++H +A+ ++ +I N FVG+ LVDMY  C  ++    VF  +S
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSE-MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEE---------------------------- 378
            K +  WNAM+ GY Q    E+A+ LF KM+E                            
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351

Query: 379 ------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-------GLGRDRYVQN 425
                  +G+ PN  T+ SV+  C    A    + IH +AIK        G G +  V N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411

Query: 426 ALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            L+DMY++  +++ ++ +FD +  + RD V+W  MI GY+   QHGDA   L  +  M E
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS---QHGDANKALELLSEMFE 468

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVG 542
           E              + +PN+ T+   L  C +L+AL  GK+IHAYA+RN   A  + V 
Sbjct: 469 ED------------CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           + L+DMYAKCG ++ AR VFD M  +N +TW  ++  YGMHG G+E L +   M   G  
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-- 574

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
               K + VT + +  ACSHSGM+ +GM+ F +MK  +G+ P P+HYAC+VDLLGRAG++
Sbjct: 575 ---FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
             A +LI  MP E      W + L  CRIH  VE+GE AA+ +  L  +    Y LLSN+
Sbjct: 632 NAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y++A  W     +R  M+  GV+K PGCSW+E       F  GD +H  +++++  L + 
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDH 750

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            +R++  GYVP+T   LH+V++EEK+ LL  HSEKLA+A+GIL TP G  IR+ KNLRVC
Sbjct: 751 MQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVC 810

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A  ++S+I   +IILRD  RFHHFKNG+CSC  YW
Sbjct: 811 GDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 189/610 (30%), Positives = 293/610 (48%), Gaps = 84/610 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +RS   +    + +  +  M      PDN+ FP V KA   I  +  G+  HA  +
Sbjct: 95  WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +S+V V N LV MY +C S + D  KVFD ++  D VSWNS+I +  + GK  +A
Sbjct: 155 VTGF-ISNVFVGNALVAMYSRCRS-LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212

Query: 165 LEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           LE F RM       P + TLV+V   C++L       LG+Q+H  ++      N F+ N 
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS---LGKQLHCFAVTSEMIQNMFVGNC 269

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL----------- 271
           L+ MYAK G +D+A T+F +   +D+VSWN +V+  SQ  +F +AV              
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329

Query: 272 ------------------------RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
                                   RQM   GIKP+ V++ SVL  C+ +  L  GKEIH 
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 308 YALRNDILI------DNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALWNAMITG 359
           YA++  I +      D + V + L+DMY  C++V+  R +FD +S K+  +  W  MI G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449

Query: 360 YGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           Y Q+    +AL L  +M EE     PNA T+S  + AC    A    + IH +A++    
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509

Query: 419 R-DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
               +V N L+DMY++ G I  ++ +FD+M  ++ V+W +++TGY + G   +AL +  E
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M+ +         + LD          +TL+ VL  C     + +G E   Y  R     
Sbjct: 570 MRRIG--------FKLD---------GVTLLVVLYACSHSGMIDQGME---YFNRMKTVF 609

Query: 538 DVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE------- 585
            V  G    + LVD+  + G LN A R+ + MP+    + W   +    +HG+       
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669

Query: 586 GQEVLELLKN 595
            +++ EL  N
Sbjct: 670 AEKITELASN 679



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 20/275 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W  ++   A+     EA+    +M  S I+P+     +VL   A +  L  GK+IH + 
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391

Query: 104 VKY-------GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIAT 154
           +KY       G+G  ++ + N L++MY KC   +     +FD ++  E+D V+W  MI  
Sbjct: 392 IKYPIDLRKNGHGDENMVI-NQLIDMYAKC-KKVDTARAMFDSLSPKERDVVTWTVMIGG 449

Query: 155 LCRFGKWDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
             + G  + ALE    M   + +  P++FT+    +AC++L+    LR+G+Q+H  +LR 
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA---ALRIGKQIHAYALR- 505

Query: 213 GEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            + N    F+ N L+ MYAK G + DA+ +F +   ++ V+W ++++    +    EA+ 
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
              +M   G K DGV++  VL ACSH  M+D G E
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 312/849 (36%), Positives = 464/849 (54%), Gaps = 49/849 (5%)

Query: 44  SW---IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           SW   I+ L +E  +N   ++I  + EM    I P+ F     LKA +    L LGKQ+H
Sbjct: 180 SWTALIQGLVAEGFAN---DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           A   K G  L  + V + LV++Y KCG ++    K+F  + E++ V+WN ++    + G 
Sbjct: 237 AQAFKLGL-LLDLFVGSALVDLYAKCG-EIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
               L+ F  M+  +V+ + FTL +V   C+N      L+ G+ +H   ++ G E N FI
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN---SKNLKQGQVIHSLIIKCGYEGNEFI 351

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
              L+ MY+K G   DA  +FK+ +  D+V W+ +++ L Q  +  E++     M L   
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREV 335
            P+  +I S+L A ++   L  G+ IHA    Y    D+ + N     ALV MY     V
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN-----ALVTMYMKNGCV 466

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
             G ++++ + D+ +  WNA ++G       +  L +F  M E  G  PN  T  S++ +
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE-EGFIPNMYTFISILGS 525

Query: 396 CVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           C  S  F    G  +H H IK  L  + +V  AL+DMY++   +E +   F+ + VRD  
Sbjct: 526 C--SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLF 583

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +W  +IT Y    Q   AL   R+MQ               E V   KPN  TL   L G
Sbjct: 584 TWTVIITNYAQTNQGEKALNYFRQMQQ--------------EGV---KPNEFTLAGCLSG 626

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C +L++L  G+++H+   ++   +D+ VGSALVDMYAKCGC+  A  +F+ +  R+ I W
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAW 686

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N II  Y  +G+G + L   + M+ EG     + P+ VTF  + +ACSH G+V EG + F
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEG-----ISPDGVTFTGILSACSHQGLVEEGKEHF 741

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             M  D+GI P+ DH AC+VD+LGR GK ++    I  M      A  W ++LGA ++H 
Sbjct: 742 NSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS-QNALIWETVLGASKMHN 800

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N+ +GE AA  LF L+P+  S Y+LLSNI+++   WD    VR  M   GV+KEPGCSW+
Sbjct: 801 NLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWV 860

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E   ++H F++ D SH Q +++H  L+ L   +    YVP T  VLHNV E EK+  L  
Sbjct: 861 EANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRF 920

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSE+LA+ F +++T     IR+ KNLR+C DCH   K IS I ++EI++RDVRRFHHFKN
Sbjct: 921 HSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKN 980

Query: 874 GTCSCGDYW 882
           G CSC D+W
Sbjct: 981 GACSCNDFW 989



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 177/647 (27%), Positives = 302/647 (46%), Gaps = 35/647 (5%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + ++L+  A  + L + K IH  +VK      S  +  +LVN+Y KC    +    V  +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDS-HLWVSLVNVYAKCRYSAY-ARLVLAK 172

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + ++D VSW ++I  L   G  + ++  F+ M    + P+ FTL +   ACS     D  
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD-- 230

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            LG+Q+H  + ++G   + F+ +AL+ +YAK G ++ A  +F    +++ V+WN +++  
Sbjct: 231 -LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q       +     M    +K +  ++ +VL  C++ + L  G+ IH+  ++      N
Sbjct: 290 AQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE-GN 348

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F+G  LVDMY  C        VF  I    I +W+A+IT   Q    EE++ LF  M  
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLM-R 407

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +    PN  T+ S++ A   +      + IH    K G   D  V NAL+ MY + G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
               +++ M  RD +SWN  ++G   CG +   L +   M              L+E  +
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHM--------------LEEGFI 513

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              PN  T +++L  C  L  +  G+++HA+ I+N L  +  V +AL+DMYAKC  L  A
Sbjct: 514 ---PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
              F+ + VR++ TW VII  Y    +G++ L   + M  EG     VKPNE T     +
Sbjct: 571 DVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-----VKPNEFTLAGCLS 625

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            CS    +  G  L + M    G        + +VD+  + G +E+A  L   +      
Sbjct: 626 GCSSLASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR--D 682

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             AW++++  C   QN +  +       +L+  ++   V  + I S+
Sbjct: 683 TIAWNTII--CGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/759 (37%), Positives = 433/759 (57%), Gaps = 69/759 (9%)

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAK---LGRVDDA 236
           F  +S  L+ S  S    L   RQ H   LR+  + +T +  +L++ YA    L     +
Sbjct: 2   FHALSQCLSSSTAS----LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLS 57

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
            TL        L S+++++ + +++  F   +     +    + PD   + S + +C+ L
Sbjct: 58  LTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASL 117

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             LD G+++HA+A  +  L D S V S+L  MY  C  +   R++FD + D+ + +W+AM
Sbjct: 118 RALDPGQQLHAFAAASGFLTD-SIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAM 176

Query: 357 ITGY-----------------------------------GQNEYDEEALMLFIKMEEVAG 381
           I GY                                   G N + +EA+ +F +M  V G
Sbjct: 177 IAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMF-RMMLVQG 235

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            WP+ +T+S V+PA    E       +HG+ IK GLG D++V +A++DMY + G ++   
Sbjct: 236 FWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMS 295

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN-----------RNNV 490
            +FD++E  +  S N  +TG +  G    AL +  + ++ + E N             N 
Sbjct: 296 RVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNG 355

Query: 491 YDL-------DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
            DL       D      +PN++T+ +++P CG +SAL  GKEIH +++R  +  DV VGS
Sbjct: 356 KDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGS 415

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           AL+DMYAKCG +  ARR FD M   N+++WN ++  Y MHG+ +E +E+   M+  G   
Sbjct: 416 ALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ-- 473

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
              KP+ VTF  + +AC+ +G+  EG   +  M +++GIEP  +HYAC+V LL R GK+E
Sbjct: 474 ---KPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLE 530

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +AY +I  MP E D A  W +LL +CR+H N+ +GEIAA+ LF LEP    +Y+LLSNIY
Sbjct: 531 EAYSIIKEMPFEPD-ACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIY 589

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           +S  LWD+   +R+ MK  G+RK PG SWIE G ++H  LAGD SH Q + +   L+ L+
Sbjct: 590 ASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLN 649

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
            +M+K GY+P T+ VL +V E++KE +LCGHSEKLA+  G+LNT PG  ++V KNLR+C+
Sbjct: 650 MQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICD 709

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH   K IS++E REI +RD  RFHHFK+G CSCGD+W
Sbjct: 710 DCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 245/522 (46%), Gaps = 97/522 (18%)

Query: 18  SLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDN 77
           SL T Q   T ++ LP P        S+   + + ARS+ F   + ++  +    + PD 
Sbjct: 50  SLSTPQLSLTLSSHLPHP-----TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDA 104

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF 137
           F  P+ +K+ A ++ L  G+Q+HA     G+ L+   VA++L +MY KC   + D  K+F
Sbjct: 105 FLLPSAIKSCASLRALDPGQQLHAFAAASGF-LTDSIVASSLTHMYLKC-DRILDARKLF 162

Query: 138 DRITEKD-----------------------------------QVSWNSMIATLCRFGKWD 162
           DR+ ++D                                    VSWN M+A     G +D
Sbjct: 163 DRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYD 222

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+  FRMML     P   T+  V  A   L   + + +G QVHG  ++ G   + F+++
Sbjct: 223 EAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL---EDVVVGAQVHGYVIKQGLGSDKFVVS 279

Query: 222 ALMAMYAKL-------------------------------GRVDDAKTLFKSFEDR---- 246
           A++ MY K                                G VD A  +F  F+D+    
Sbjct: 280 AMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMEL 339

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           ++V+W +I++S SQN K LEA+   R M   G++P+ V+I S++PAC ++  L  GKEIH
Sbjct: 340 NVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIH 399

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            ++LR  I  D+ +VGSAL+DMY  C  ++  RR FD +S   +  WNA++ GY  +   
Sbjct: 400 CFSLRRGIF-DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKA 458

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGR 419
           +E + +F  M + +G  P+  T + V+ AC ++         +      HG   K+    
Sbjct: 459 KETMEMFHMMLQ-SGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKM---- 513

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
           + Y    L+ + SR+G++E + +I  +M    D   W  +++
Sbjct: 514 EHYA--CLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S +++ +  EA+  + +M    ++P+    P+++ A   I  L  GK+IH   
Sbjct: 343 TWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFS 402

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G     V V + L++MY KCG  +    + FD+++  + VSWN+++      GK   
Sbjct: 403 LRRGI-FDDVYVGSALIDMYAKCGR-IQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKE 460

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS-NLSRRDGLRLGRQV---HGNSLRVGEWNTFI 219
            +E F MML S  +P   T   V  AC+ N    +G R    +   HG   ++  +    
Sbjct: 461 TMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHY---- 516

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
              L+ + +++G++++A ++ K    + D   W  ++SS
Sbjct: 517 -ACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 293/815 (35%), Positives = 467/815 (57%), Gaps = 31/815 (3%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           + S  + + + + ++L++     D + GK +H  ++K G  L  +   N L+N Y K  S
Sbjct: 36  SHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLD-LFANNILLNFYVKYDS 94

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            + D  K+FD + +++ VS+ ++I    +  ++  A+  F  +     E + F   +V  
Sbjct: 95  -LPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL- 152

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
               L   +  +LG  VH    ++G + + F+  AL+  Y+  G  + A+ +F + E +D
Sbjct: 153 --KLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKD 210

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSW  +V+   +N+ F E++    +M + G KP+  + ASVL AC  LE+ + GK +H 
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
            A +   L +  FVG  L+D+Y    +V+   +VF+ +    +  W+ MI  Y Q+E  E
Sbjct: 271 CAFKTSYL-EELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE 329

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EA+ +F +M     L PN  T++S++ AC           IH H +K+GL  + +V NAL
Sbjct: 330 EAIEMFCRMRRGLVL-PNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           MDMY++ GR+E S  +F +      VSWNT+I GY   G    AL+L ++M   + +   
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                            +T  +VL  C  ++AL  G +IH+ +++ +   + VVG+AL+D
Sbjct: 449 -----------------VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALID 491

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKCG +  AR VFD++   + ++WN +I  Y +HG   E L+  ++M+       E K
Sbjct: 492 MYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLET-----ECK 546

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P++VTF+ + +ACS++G++  G   F  M ++Y IEP  +HY C+V LLGR+G ++ A +
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAK 606

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           L++ +P E      W +LL AC IH +VE+G I+AQ +  +EP+  + +VLLSNIY++A+
Sbjct: 607 LVHEIPFE-PSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANAR 665

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W     +R  MK  G+RKEPG SWIE    +H F  GD SH  ++ ++G LE L+ + R
Sbjct: 666 RWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKAR 725

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
            EGYVPD S VL +V + +KE  L  HSE+LA+A+G++ TP  + +R+ KNLR+C DCH 
Sbjct: 726 NEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHA 785

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A K ISKI  R+II+RD+ RFHHF  G CSCGDYW
Sbjct: 786 AIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 277/586 (47%), Gaps = 50/586 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++  ++  ++  +F EAI  +  +     + + F F  VLK +   +   LG  +HA V
Sbjct: 112 SFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  S   V   L++ Y  CG       +VFD I  KD VSW  M+A       ++ 
Sbjct: 172 YKLGFD-SDAFVGTALIDCYSVCGYAEC-ARQVFDAIEYKDMVSWTGMVACYVENECFEE 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNA 222
           +L+ F  M     +P++FT  SV  AC  L   +   +G+ VHG + +       F+   
Sbjct: 230 SLKLFSRMRIVGFKPNNFTFASVLKACVGL---EVFNVGKAVHGCAFKTSYLEELFVGVE 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G VDDA  +F+     D++ W+ +++  +Q+++  EA+    +M    + P+
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPN 346

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++AS+L AC+ L  L  G +IH + ++  + + N FV +AL+DMY  C  +E   ++F
Sbjct: 347 QFTLASLLQACASLVDLQLGNQIHCHVVKVGLDM-NVFVSNALMDMYAKCGRMENSLQLF 405

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
               +     WN +I GY Q    E+AL+LF  M E   +     T SSV+ AC    A 
Sbjct: 406 SESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ-VQGTEVTYSSVLRACAGIAAL 464

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH  ++K    ++  V NAL+DMY++ G I+ ++ +FD +   D VSWN MI+GY
Sbjct: 465 EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGY 524

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           ++ G +G+AL     M   E                  KP+ +T + +L  C     L +
Sbjct: 525 SVHGLYGEALKTFESMLETE-----------------CKPDKVTFVGILSACSNAGLLDR 567

Query: 523 GKEIHAYAIRNMLATDVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           G+   AY    +   D+       + +V +  + G L+ A ++   +P   +V+ W  ++
Sbjct: 568 GQ---AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALL 624

Query: 578 MAYGMHGE-------GQEVLE----------LLKNMVAEGSRGGEV 606
            A  +H +        Q VLE          LL N+ A   R G V
Sbjct: 625 SACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNV 670


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 307/785 (39%), Positives = 432/785 (55%), Gaps = 75/785 (9%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN +I      G        +R M      P  +T   V  AC+NLS    L LG  +H 
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSS---LSLGASLHA 283

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDK 263
              R G   N F+ NA+++MY K G +  A  +F     R   DLVSWN++VS+      
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD 343

Query: 264 FLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
              A+    +M  R +  PD +S+ ++LPAC+ L     G+++H +++R+  L+D+ FVG
Sbjct: 344 ANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSG-LVDDVFVG 402

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV--- 379
           +A+VDMY  C ++E   +VF  +  K +  WNAM+TGY Q    E AL LF +M E    
Sbjct: 403 NAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIE 462

Query: 380 -------------------------------AGLWPNATTMSSVVPACVRSEAFPDKEGI 408
                                           G  PN  T+ S++ ACV   A    +  
Sbjct: 463 LDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKET 522

Query: 409 HGHAIKLGL--------GRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTM 458
           H +AIK  L          D  V N L+DMY++    E+++ +FD +    RD V+W  M
Sbjct: 523 HCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVM 582

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I GY    QHGDA   L+    M         + +D+++   KPN  TL   L  C  L+
Sbjct: 583 IGGY---AQHGDANNALQLFSGM---------FKMDKSI---KPNDFTLSCALVACARLA 627

Query: 519 ALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           AL  G+++HAY +RN   + ++ V + L+DMY+K G ++ A+ VFD MP RN ++W  ++
Sbjct: 628 ALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLM 687

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             YGMHG G++ L +   M     R   + P+ +TF+ +  ACSHSGMV  G++ F +M 
Sbjct: 688 TGYGMHGRGEDALRVFDEM-----RKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMS 742

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
            D+G++P P+HYAC+VDL GRAG++ +A +LIN MP E      W +LL ACR+H NVE+
Sbjct: 743 KDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPV-VWVALLSACRLHSNVEL 801

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GE AA  L  LE      Y LLSNIY++A+ W     +R  MK  G++K PGCSWI+   
Sbjct: 802 GEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRK 861

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +  F  GD SH QS+Q++  L +L +R++  GYVP TS  LH+V++EEK  LL  HSEK
Sbjct: 862 GVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEK 921

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+A+GIL   P   IR+ KNLR+C DCH A  +ISKI   EIILRD  RFHHFKNG+CS
Sbjct: 922 LALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCS 981

Query: 878 CGDYW 882
           C  YW
Sbjct: 982 CKGYW 986



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 182/619 (29%), Positives = 297/619 (47%), Gaps = 86/619 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W + +R        R+    Y +M      PD++ FP V KA A +  LSLG  +HA V 
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
           + G+  S+V V N +V+MYGKCG+ +   + +FD +  +   D VSWNS+++        
Sbjct: 287 RSGFA-SNVFVCNAVVSMYGKCGA-LRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDA 344

Query: 162 DLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFI 219
           + AL  F  M   ++  P   +LV++  AC++L+    LR GRQVHG S+R G   + F+
Sbjct: 345 NTALALFHKMTTRHLMSPDVISLVNILPACASLA--ASLR-GRQVHGFSIRSGLVDDVFV 401

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF--------------- 264
            NA++ MYAK G++++A  +F+  + +D+VSWN +V+  SQ  +                
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 265 --------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                                EA+   RQM   G +P+ V++ S+L AC  +  L  GKE
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521

Query: 305 IHAYALRNDILIDNSFVGS-------ALVDMYCNCREVECGRRVFDFIS--DKKIALWNA 355
            H YA++  + +D    G+        L+DMY  C+  E  R++FD +S  D+ +  W  
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 356 MITGYGQNEYDEEALMLFIKMEEV-AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           MI GY Q+     AL LF  M ++   + PN  T+S  + AC R  A      +H + ++
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641

Query: 415 LGLGRDR-YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
              G    +V N L+DMYS+ G ++ ++ +FD+M  R+ VSW +++TGY + G+  DAL 
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           +  EM+ +                    P+ IT + VL  C        G   H     N
Sbjct: 702 VFDEMRKVPL-----------------VPDGITFLVVLYACS-----HSGMVDHGINFFN 739

Query: 534 MLATDVVVG------SALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAYGMHGEG 586
            ++ D  V       + +VD++ + G L  A ++ + MP+    + W  ++ A  +H   
Sbjct: 740 RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSN- 798

Query: 587 QEVLELLKNMVAEGSRGGE 605
            E+ E   N + E   G +
Sbjct: 799 VELGEFAANRLLELESGND 817



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 17/272 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+  Q  EA+  + +M     +P+     ++L A   +  L  GK+ H + 
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYA 526

Query: 104 VKY-------GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIAT 154
           +K+         G   + V N L++MY KC S      K+FD ++ KD+  V+W  MI  
Sbjct: 527 IKFILNLDGPDPGADDLKVINGLIDMYAKCQSTE-VARKMFDSVSPKDRDVVTWTVMIGG 585

Query: 155 LCRFGKWDLALEAFRMMLY--SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR- 211
             + G  + AL+ F  M     +++P+ FTL    +AC+ L+    LR GRQVH   LR 
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLA---ALRFGRQVHAYVLRN 642

Query: 212 -VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
             G    F+ N L+ MY+K G VD A+ +F +   R+ VSW ++++    + +  +A+  
Sbjct: 643 FYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRV 702

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +M    + PDG++   VL ACSH  M+D G
Sbjct: 703 FDEMRKVPLVPDGITFLVVLYACSHSGMVDHG 734


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 299/824 (36%), Positives = 475/824 (57%), Gaps = 40/824 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           MT+ +  PD   +  +LK+    ++  LGK +H  +++ G  L SV V NTL+++Y KCG
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV-VLNTLISLYSKCG 93

Query: 128 SDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
            D      +F+ +  ++D VSW++M++          A+  F  ML     P+ +   +V
Sbjct: 94  -DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 152

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK-LGRVDDAKTLFKSF 243
             ACSN +      +G  ++G  ++ G  E +  +   L+ M+ K  G +  A  +F   
Sbjct: 153 IRACSNANYA---WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 209

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            +R+LV+W  +++  +Q     +A+     M L G  PD  + +SVL AC+ L +L  GK
Sbjct: 210 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIALWNAMITGY 360
           ++H+  +R  + +D   VG +LVDMY  C     V+  R+VF+ + +  +  W A+IT Y
Sbjct: 270 QLHSRVIRLGLALDVC-VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328

Query: 361 GQN-EYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Q+ E D+EA+ LF KM  ++G + PN  + SSV+ AC         E ++ +A+KLG+ 
Sbjct: 329 VQSGECDKEAIELFCKM--ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 386

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
               V N+L+ MY+R GR+E ++  FD +  ++ VS+N ++ GY    +  +A +L  E+
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 446

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
            +                      ++ T  ++L G  ++ A+ KG++IH   ++    ++
Sbjct: 447 ADTG-----------------IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 489

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             + +AL+ MY++CG +  A +VF+ M  RNVI+W  +I  +  HG     LE+   M+ 
Sbjct: 490 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G+     KPNE+T++A+ +ACSH GM+SEG   F  M  ++GI P  +HYAC+VDLLGR
Sbjct: 550 TGT-----KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 604

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           +G + +A + IN MP   D A  W +LLGACR+H N E+G  AA+ +   EPD  + Y+L
Sbjct: 605 SGLLVEAMEFINSMPLMAD-ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 663

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN+++SA  W   + +RK MKE  + KE GCSWIE  + +H+F  G+ SH Q+ Q++  
Sbjct: 664 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 723

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L+ L+ ++++ GY+PDT  VLH++ EE+KE  L  HSEK+A+AFG+++T     IR+ KN
Sbjct: 724 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 783

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH A K+IS    REI++RD  RFHH KNG CSC DYW
Sbjct: 784 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 285/550 (51%), Gaps = 33/550 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A ++   +AI ++++M      P+ + F AV++A +      +G+ I+  V
Sbjct: 113 SWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFV 172

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK GY  + V V   L++M+ K   D+   YKVFD++ E++ V+W  MI    + G    
Sbjct: 173 VKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 232

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A++ F  M  S   P  FT  SV  AC+ L     L LG+Q+H   +R+G   +  +  +
Sbjct: 233 AIDLFLDMELSGYVPDRFTYSSVLSACTELGL---LALGKQLHSRVIRLGLALDVCVGCS 289

Query: 223 LMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMAL 276
           L+ MYAK    G VDD++ +F+   + +++SW  I+++  Q+   DK  EA+    +M  
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK--EAIELFCKMIS 347

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             I+P+  S +SVL AC +L    TG+++++YA++  I   N  VG++L+ MY     +E
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC-VGNSLISMYARSGRME 406

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R+ FD + +K +  +NA++ GY +N   EEA +LF ++ +  G+  +A T +S++   
Sbjct: 407 DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT-GIGISAFTFASLLSGA 465

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    E IHG  +K G   ++ + NAL+ MYSR G IE +  +F++ME R+ +SW 
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MITG+    +HG A   L     M E                 KPN IT + VL  C  
Sbjct: 526 SMITGF---AKHGFATRALEMFHKMLETGT--------------KPNEITYVAVLSACSH 568

Query: 517 LSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWN 574
           +  +++G K  ++    + +   +   + +VD+  + G L  A    + MP+  + + W 
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628

Query: 575 VIIMAYGMHG 584
            ++ A  +HG
Sbjct: 629 TLLGACRVHG 638


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 300/824 (36%), Positives = 474/824 (57%), Gaps = 40/824 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           MT+ +  PD   +  +LK+    ++  LGK +H  +++ G  L SV V NTL+++Y KCG
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV-VLNTLISLYSKCG 75

Query: 128 SDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
            D      +F+ +  K D VSW++M++          A+  F  ML     P+ +   +V
Sbjct: 76  -DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 134

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK-LGRVDDAKTLFKSF 243
             ACSN +      +G  ++G  ++ G  E +  +   L+ M+ K  G +  A  +F   
Sbjct: 135 IRACSNANYA---WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 191

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            +R+LV+W  +++  +Q     +A+     M L G  PD  + +SVL AC+ L +L  GK
Sbjct: 192 PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIALWNAMITGY 360
           ++H+  +R  + +D   VG +LVDMY  C     V+  R+VF+ + +  +  W A+IT Y
Sbjct: 252 QLHSRVIRLGLALDVC-VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310

Query: 361 GQN-EYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Q+ E D+EA+ LF KM  ++G + PN  + SSV+ AC         E ++ +A+KLG+ 
Sbjct: 311 VQSGECDKEAIELFCKM--ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 368

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
               V N+L+ MY+R GR+E ++  FD +  ++ VS+N ++ GY    +  +A +L  E+
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 428

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
            +                      ++ T  ++L G  ++ A+ KG++IH   ++    ++
Sbjct: 429 ADTG-----------------IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 471

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             + +AL+ MY++CG +  A +VF+ M  RNVI+W  +I  +  HG     LE+   M+ 
Sbjct: 472 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 531

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G+     KPNE+T++A+ +ACSH GM+SEG   F  M  ++GI P  +HYAC+VDLLGR
Sbjct: 532 TGT-----KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 586

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           +G + +A + IN MP   D A  W +LLGACR+H N E+G  AA+ +   EPD  + Y+L
Sbjct: 587 SGLLVEAMEFINSMPLMAD-ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 645

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN+++SA  W   + +RK MKE  + KE GCSWIE  + +H+F  G+ SH Q+ Q++  
Sbjct: 646 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 705

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L+ L+ ++++ GY+PDT  VLH++ EE+KE  L  HSEK+A+AFG+++T     IR+ KN
Sbjct: 706 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 765

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH A K+IS    REI++RD  RFHH KNG CSC DYW
Sbjct: 766 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 285/550 (51%), Gaps = 33/550 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A ++   +AI ++++M      P+ + F AV++A +      +G+ I+  V
Sbjct: 95  SWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFV 154

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK GY  + V V   L++M+ K   D+   YKVFD++ E++ V+W  MI    + G    
Sbjct: 155 VKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 214

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A++ F  M  S   P  FT  SV  AC+ L     L LG+Q+H   +R+G   +  +  +
Sbjct: 215 AIDLFLDMELSGYVPDRFTYSSVLSACTELGL---LALGKQLHSRVIRLGLALDVCVGCS 271

Query: 223 LMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMAL 276
           L+ MYAK    G VDD++ +F+   + +++SW  I+++  Q+   DK  EA+    +M  
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK--EAIELFCKMIS 329

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             I+P+  S +SVL AC +L    TG+++++YA++  I   N  VG++L+ MY     +E
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC-VGNSLISMYARSGRME 388

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R+ FD + +K +  +NA++ GY +N   EEA +LF ++ +  G+  +A T +S++   
Sbjct: 389 DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT-GIGISAFTFASLLSGA 447

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    E IHG  +K G   ++ + NAL+ MYSR G IE +  +F++ME R+ +SW 
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MITG+    +HG A   L     M E                 KPN IT + VL  C  
Sbjct: 508 SMITGF---AKHGFATRALEMFHKMLETGT--------------KPNEITYVAVLSACSH 550

Query: 517 LSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWN 574
           +  +++G K  ++    + +   +   + +VD+  + G L  A    + MP+  + + W 
Sbjct: 551 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 610

Query: 575 VIIMAYGMHG 584
            ++ A  +HG
Sbjct: 611 TLLGACRVHG 620


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 300/774 (38%), Positives = 428/774 (55%), Gaps = 70/774 (9%)

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMN 221
           ++L A  + L  +V+ + F        C N S    L   RQ H + L+ G +N T +  
Sbjct: 1   MSLSAQALALLDSVQHTIFN-------CLN-STTASLSQTRQAHAHILKTGLFNDTHLAT 52

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L++ YA      DA  +     + ++ S++T++ + S+  +F  A+    QM  RG+ P
Sbjct: 53  KLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D   + S + AC+ L  L   +++H  A  +    D SFV S+LV MY  C ++    RV
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD-SFVQSSLVHMYIKCNQIRDAHRV 171

Query: 342 FDFISDKKI----AL-------------------------------WNAMITGYGQNEYD 366
           FD + +  +    AL                               WN MI G+  +   
Sbjct: 172 FDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLY 231

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
            EA+++F+ M  + G  P+ TT+SSV+PA    E       IHG+ IK GL  D+ V +A
Sbjct: 232 SEAVLMFLDMH-LRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMY +         +FD M+  D  S N  I G +  GQ   +L L R++++   E N
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350

Query: 487 -----------RNNVYDLDE-------TVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
                        N  D++         +   KPNS+T+  +LP CG ++AL  GK  H 
Sbjct: 351 VVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHC 410

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           +++R  ++TDV VGSAL+DMYAKCG +  +R  FD +P +N++ WN +I  Y MHG+ +E
Sbjct: 411 FSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKE 470

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            +E+   M     R G+ KP+ ++F  + +ACS SG+  EG   F  M   YGIE   +H
Sbjct: 471 AMEIFDLM----QRSGQ-KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEH 525

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YAC+V LL RAGK+E AY +I  MP   D A  W +LL +CR+H NV +GE+AA+ LF L
Sbjct: 526 YACMVTLLSRAGKLEQAYAMIRRMPVNPD-ACVWGALLSSCRVHNNVSLGEVAAEKLFEL 584

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP    +Y+LLSNIY+S  +W++   VR  MK  G+RK PGCSWIE  +++H  LAGD S
Sbjct: 585 EPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKS 644

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H Q  Q+   L+ LS  M+K GY P+ + VL +V E++KE +LCGHSEKLA+ FG+LNTP
Sbjct: 645 HPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTP 704

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PG  ++V KNLR+C DCH   KFIS  E REI +RD  RFHHFK G CSCGDYW
Sbjct: 705 PGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 259/564 (45%), Gaps = 97/564 (17%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           LS  +Q HAH++K G   +   +A  L++ Y        D   V D + E +  S++++I
Sbjct: 29  LSQTRQAHAHILKTGL-FNDTHLATKLLSHYAN-NMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----- 207
               +F ++  AL  F  ML   + P +  L S   AC+ LS    L+  RQVHG     
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS---ALKPARQVHGIASVS 143

Query: 208 ---------NSL------------------RVGEWNTFIMNALMAMYAKLGRVDDAKTLF 240
                    +SL                  R+ E +    +AL+A YA+ G VD+AK LF
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203

Query: 241 KSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
               D     +L+SWN +++  + +  + EAV+    M LRG +PDG +I+SVLPA   L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCR--------------------- 333
           E L  G  IH Y ++  ++ D   V SAL+DMY  C+C                      
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAF 322

Query: 334 --------EVECGRRVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                   +VE   R+F  + D+ + L    W +MI    QN  D EAL LF +M ++AG
Sbjct: 323 IFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAG 381

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + PN+ T+  ++PAC    A    +  H  +++ G+  D YV +AL+DMY++ GRI+ S+
Sbjct: 382 VKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASR 441

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
             FD +  ++ V WN +I GY + G+  +A+ +   MQ   +                 K
Sbjct: 442 ICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ-----------------K 484

Query: 502 PNSITLMTVLPGCGALSALAKGK-EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           P+ I+   VL  C       +G    ++ + +  +   V   + +V + ++ G L  A  
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544

Query: 561 VFDLMPVR-NVITWNVIIMAYGMH 583
           +   MPV  +   W  ++ +  +H
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVH 568



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 82/482 (17%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           ++ +QF  A+ ++ +M    + PDN   P+ +KA AG+  L   +Q+H      G+   S
Sbjct: 90  SKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDS 149

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM- 171
             V ++LV+MY KC + + D ++VFDR+ E D VSW++++A   R G  D A   F  M 
Sbjct: 150 F-VQSSLVHMYIKC-NQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMG 207

Query: 172 ----------------------LYSNV------------EPSSFTLVSVALACSNLSRRD 197
                                 LYS              EP   T+ SV  A  +L   +
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL---E 264

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL-------------------------- 230
            L +G  +HG  ++ G   +  + +AL+ MY K                           
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324

Query: 231 -----GRVDDAKTLFKSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                G+V+ +  LF+  +D+    ++VSW ++++  SQN + +EA+   R+M + G+KP
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKP 384

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I  +LPAC ++  L  GK  H ++LR  I  D  +VGSAL+DMY  C  ++  R  
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTD-VYVGSALIDMYAKCGRIQASRIC 443

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I  K +  WNA+I GY  +   +EA+ +F  M+  +G  P+  + + V+ AC +S  
Sbjct: 444 FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQR-SGQKPDIISFTCVLSACSQS-G 501

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTM 458
             ++   + +++    G +  V++   ++ + SR G++E +  +   M V  D   W  +
Sbjct: 502 LTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGAL 561

Query: 459 IT 460
           ++
Sbjct: 562 LS 563



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 39/294 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     S  + EA+L +++M     +PD     +VL AV  ++DL +G  IH +V
Sbjct: 217 SWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRI--------------------- 140
           +K G  +S   V++ L++MYGKC   S+M  V+   D +                     
Sbjct: 277 IKQGL-VSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335

Query: 141 -----TEKDQ------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
                  KDQ      VSW SMIA   + G+   ALE FR M  + V+P+S T+  +  A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPA 395

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C N++    L  G+  H  SLR G   + ++ +AL+ MYAK GR+  ++  F     ++L
Sbjct: 396 CGNIA---ALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           V WN +++  + + K  EA+     M   G KPD +S   VL ACS   + + G
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 37/250 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++ +  EA+  + EM  + ++P++   P +L A   I  L  GK  H   
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   + V V + L++MY KCG  +      FD I  K+ V WN++IA     GK   
Sbjct: 413 LRRGIS-TDVYVGSALIDMYAKCGR-IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKE 470

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+E F +M  S  +P   +   V  ACS    + GL              E  ++  N++
Sbjct: 471 AMEIFDLMQRSGQKPDIISFTCVLSACS----QSGLT-------------EEGSYYFNSM 513

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            + Y    RV+                +  +V+ LS+  K  +A   +R+M    + PD 
Sbjct: 514 SSKYGIEARVEH---------------YACMVTLLSRAGKLEQAYAMIRRMP---VNPDA 555

Query: 284 VSIASVLPAC 293
               ++L +C
Sbjct: 556 CVWGALLSSC 565


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 302/828 (36%), Positives = 464/828 (56%), Gaps = 46/828 (5%)

Query: 67  EMTRSDIQP-----DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-YGLSSVTVANTLV 120
           E+T   I P     D+FA    L+      D   G+ +H HVV+ G  G   +  AN L+
Sbjct: 44  ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           NMYGK G  +    ++FDR+ E++ VS+ +++    + G ++ A   FR + +   E + 
Sbjct: 104 NMYGKLGP-LASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162

Query: 181 F---TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
           F   T++ +A+A       D   L   VH  + ++G + N F+ + L+  Y+    V DA
Sbjct: 163 FVLTTMLKLAIA------MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +F     +D V W  +VS  S+ND    A     +M + G KP+  ++ SVL A   L
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCL 276

Query: 297 EMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
             +  GK IH  A++  ND       VG AL+DMY  C +++  R  F+ I    + L +
Sbjct: 277 PSVVLGKGIHGCAIKTLNDT---EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 333

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI+ Y Q+  +E+A  LF+++   + L PN  ++SSV+ AC         + IH HAIK
Sbjct: 334 FMISRYAQSNQNEQAFELFLRLMRSSVL-PNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           +G   D +V NALMD Y++   ++ S  IF  +   + VSWNT++ G++  G   +AL +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EMQ  +    +                 +T  +VL  C + +++    +IH    ++ 
Sbjct: 453 FCEMQAAQMPCTQ-----------------VTYSSVLRACASTASIRHAGQIHCSIEKST 495

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
              D V+G++L+D YAKCG +  A +VF  +  R++I+WN II  Y +HG+  + LEL  
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M         V+ N++TF+AL + CS +G+V+ G+ LF  M+ D+GI+PS +HY C+V 
Sbjct: 556 RM-----NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVR 610

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGRAG++ DA Q I  +P     A  W +LL +C IH+NV +G  +A+ +  +EP   +
Sbjct: 611 LLGRAGRLNDALQFIGDIPSA-PSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 669

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLLSN+Y++A   D+   +RK M+ +GVRK PG SW+E   EIH F  G   H     
Sbjct: 670 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRV 729

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L+ +  +EGY+PD + VLH+V++E+K  +L  HSE+LA+A+G++ TPPG  IR
Sbjct: 730 INAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIR 789

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR C DCH A   ISKI  REII+RD+ RFHHF++G CSCGDYW
Sbjct: 790 ILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 242/511 (47%), Gaps = 40/511 (7%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           N FR     + +M  S  +P+ FA  +VLKA   +  + LGK IH   +K     +   V
Sbjct: 246 NAFR----VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT-LNDTEPHV 300

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              L++MY KCG D+ D    F+ I   D +  + MI+   +  + + A E F  ++ S+
Sbjct: 301 GGALLDMYAKCG-DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           V P+ ++L SV  AC+N+ + D    G+Q+H +++++G E + F+ NALM  YAK   +D
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLD---FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            +  +F S  D + VSWNTIV   SQ+    EA+    +M    +    V+ +SVL AC+
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
               +    +IH  ++      +++ +G++L+D Y  C  +    +VF  + ++ I  WN
Sbjct: 477 STASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           A+I+GY  +    +AL LF +M + + +  N  T  +++  C          G+  H + 
Sbjct: 536 AIISGYALHGQAADALELFDRMNK-SNVESNDITFVALLSVC-------SSTGLVNHGLS 587

Query: 415 L--------GLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTI- 464
           L        G+         ++ +  R GR+  +     D+      + W  +++   I 
Sbjct: 588 LFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH 647

Query: 465 ----CGQHGDALMLLREMQNMEEEKNRNNVY----DLDETVLRPKPNSITLMTVLPGCGA 516
                G+     +L  E Q+       +N+Y     LD+  L  K      +  +PG   
Sbjct: 648 KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPG--- 704

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           LS +    EIHA+++ ++   D+ V +A+++
Sbjct: 705 LSWVEIKGEIHAFSVGSVDHPDMRVINAMLE 735



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S    EA+  + EM  + +      + +VL+A A    +    QIH  +
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  +   +V + N+L++ Y KCG  + D  KVF  + E+D +SWN++I+     G+   
Sbjct: 492 EKSTFNNDTV-IGNSLIDTYAKCGY-IRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN-------LSRRDGLRLGRQVHGNSLRVGEWN 216
           ALE F  M  SNVE +  T V++   CS+       LS  D +R+    HG    +  + 
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID---HGIKPSMEHYT 606

Query: 217 TFIMNALMAMYAKLGRVDDA 236
             +      +  + GR++DA
Sbjct: 607 CIVR-----LLGRAGRLNDA 621


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/650 (40%), Positives = 408/650 (62%), Gaps = 25/650 (3%)

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D A ++F+  ++ D  ++N ++   +      EA++  ++M    ++PD  +   +L  
Sbjct: 74  MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           CS L+ L  G++IHA  ++      + FV + L+ MY NC EVE  RRVFD +S++ +  
Sbjct: 134 CSRLQALSEGEQIHALIMKCG-FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN+M  GY ++   EE + LF +M E+  +  +  T+ SV+ AC R       E I+ + 
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLEL-DIRFDEVTLVSVLTACGRLADLELGEWINRYV 251

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            + GL  +  +  +L+DMY++ G+++ ++ +FD M+ RD V+W+ MI+GY+   +  +AL
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREAL 311

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L  EMQ       + N+           PN IT++++L  C  L AL  GK +H +  +
Sbjct: 312 DLFHEMQ-------KANI----------DPNEITMVSILSSCAVLGALETGKWVHFFIKK 354

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             +   V +G+AL+D YAKCG +  +  VF  MPV+NV++W V+I     +G+G++ LE 
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M+ +      V+PN+VTFI + +ACSH+G+V EG DLF  M  D+GIEP  +HY C+
Sbjct: 415 FYLMLEKN-----VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCM 469

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VD+LGRAG +E+A+Q I  MP +   A  W +LL +C++H+NVEIGE + + L +LEP  
Sbjct: 470 VDILGRAGLIEEAFQFIKNMPIQ-PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH 528

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           +  Y+LLSNIY+S   W+ A+ VR +MKE G++K PGCS IE    IH+F A D  H QS
Sbjct: 529 SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQS 588

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
           E+++  +E++ ++++  GYVP+T+    +  E++KE+ +  HSEKLAIAFG++ +PPGTT
Sbjct: 589 EEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTT 648

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           IR+ KNLRVC DCH ATK +SK+ +REI++RD  RFHHFK G+CSC DYW
Sbjct: 649 IRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 217/408 (53%), Gaps = 20/408 (4%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EAIL + EM  + +QPD F FP +LK  + +Q LS G+QIHA ++K G+G S   V NTL
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFG-SHGFVKNTL 165

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MY  CG ++    +VFD ++E++  +WNSM A   + G W+  ++ F  ML  ++   
Sbjct: 166 IHMYANCG-EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFD 224

Query: 180 SFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKT 238
             TLVSV  AC  L+  + G  + R V    L+    N  ++ +L+ MYAK G+VD A+ 
Sbjct: 225 EVTLVSVLTACGRLADLELGEWINRYVEEKGLK---GNPTLITSLVDMYAKCGQVDTARR 281

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           LF   + RD+V+W+ ++S  SQ  +  EA+    +M    I P+ +++ S+L +C+ L  
Sbjct: 282 LFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA 341

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L+TGK +H +  +  + +  + +G+AL+D Y  C  VE    VF  +  K +  W  +I 
Sbjct: 342 LETGKWVHFFIKKKRMKLTVT-LGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           G   N   ++AL  F  M E   + PN  T   V+ AC  +    +     G  + + + 
Sbjct: 401 GLASNGQGKKALEYFYLMLE-KNVEPNDVTFIGVLSACSHAGLVDE-----GRDLFVSMS 454

Query: 419 RDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
           RD  ++        ++D+  R G IE +     +M ++ + V W T++
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL 502



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 269/570 (47%), Gaps = 41/570 (7%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+    I+DL+   +IHAH++K    L      N L +      + M     +F +I E
Sbjct: 30  ILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDE 86

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
            D  ++N MI           A+  F+ M  ++V+P  FT   +   CS L     L  G
Sbjct: 87  PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQ---ALSEG 143

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            Q+H   ++ G   + F+ N L+ MYA  G V+ A+ +F    +R++ +WN++ +  +++
Sbjct: 144 EQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
             + E V    +M    I+ D V++ SVL AC  L  L+ G+ I+ Y +    L  N  +
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRY-VEEKGLKGNPTL 262

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            ++LVDMY  C +V+  RR+FD +  + +  W+AMI+GY Q     EAL LF +M++ A 
Sbjct: 263 ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK-AN 321

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + PN  TM S++ +C    A    + +H    K  +     +  ALMD Y++ G +E S 
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI 381

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F  M V++ +SW  +I G    GQ   AL     M     EKN              +
Sbjct: 382 EVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLML----EKN-------------VE 424

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARR 560
           PN +T + VL  C     + +G+++     R+  +   +     +VD+  + G +  A +
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQ 484

Query: 561 VFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
               MP++ N + W  ++ +  +H     G+E L+ L  ++ E +  G+       +I L
Sbjct: 485 FIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL--IILEPTHSGD-------YILL 535

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               +  G   + + +  +MK+  GI+ +P
Sbjct: 536 SNIYASVGRWEDALKVRGEMKEK-GIKKTP 564



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 166/346 (47%), Gaps = 16/346 (4%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W        +S  + E +  + EM   DI+ D     +VL A   + DL LG+ I
Sbjct: 188 RNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWI 247

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           + +V + G    + T+  +LV+MY KCG  +    ++FD++  +D V+W++MI+   +  
Sbjct: 248 NRYVEEKGLK-GNPTLITSLVDMYAKCGQ-VDTARRLFDQMDRRDVVAWSAMISGYSQAS 305

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTF 218
           +   AL+ F  M  +N++P+  T+VS+  +C+ L     L  G+ VH     +  +    
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSCAVLG---ALETGKWVHFFIKKKRMKLTVT 362

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +  ALM  YAK G V+ +  +F     ++++SW  ++  L+ N +  +A+ +   M  + 
Sbjct: 363 LGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKN 422

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+ V+   VL ACSH  ++D G+++     R+  +         +VD+      +E  
Sbjct: 423 VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIE-- 480

Query: 339 RRVFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
              F FI +  I     +W  ++     +   E  EE+L   I +E
Sbjct: 481 -EAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILE 525


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/835 (36%), Positives = 474/835 (56%), Gaps = 55/835 (6%)

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
           R +++P+  A  A++ A + + +L+ G++IH+ +    +  +SV + N L++MY KCGS 
Sbjct: 134 RMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSV-LGNALISMYSKCGS- 191

Query: 130 MWDVYKVFDRI---TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP-SSFTLVS 185
           + D  + FDR+   +++D V+WN+MI+   R G    AL+ FR M      P +S T VS
Sbjct: 192 LIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVS 251

Query: 186 VALACSN---LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           V  +C     LS  D     R +HG  +  G E   F+  AL+  Y KLG +DDA  +F 
Sbjct: 252 VLDSCVEAGLLSLEDV----RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFL 307

Query: 242 SFEDRD----LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
              D +    LV+ + ++S+  QN    E++     M L G KP GV++ SVL ACS L+
Sbjct: 308 RKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ 367

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
           +      +   A+       ++ +G+ L+  Y    ++   R  FD I    +  WNAM 
Sbjct: 368 VGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMA 427

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG------IHGH 411
             Y Q+    EAL+LF +M  + G+ P+  T  + + AC    A+P +        I   
Sbjct: 428 AAYLQHHRSREALVLFERML-LEGVRPSVATFITALTACA---AYPPQTASAIGKRIQSL 483

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQHG 469
             + GL  D  V NA ++MY++ G +  ++ +F+ +    RD ++WN+M+  Y   G HG
Sbjct: 484 LEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAY---GHHG 540

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
                    Q ME EK               KPN +T + VL    + +++A+G+EIHA 
Sbjct: 541 LGKEAFELFQAMEAEK-------------LVKPNKVTFVAVLDASTSRTSIAQGREIHAR 587

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQ 587
            + N   +D V+ +AL++MYAKCG L+ A+ +FD       +VI W  +I  Y  +G+ +
Sbjct: 588 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAE 647

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             L+L   M  +G     V+PN VTFI+   AC+H G + +G +L   M  D+GI P+  
Sbjct: 648 RALKLFWTMQQQG-----VRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASK 702

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           H++C+VDLLGR G++++A +L+            W +LL AC+  + +E GE  A+ +  
Sbjct: 703 HFSCIVDLLGRCGRLDEAEKLLERTSQA--DVITWMALLDACKNSKELERGERCAERIMQ 760

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+P+VAS Y++L+++Y++A  W++A  +RK M + G+R +PGCS +E   E+H F AGD 
Sbjct: 761 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDK 820

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH +SE+++  LE L   ++  GYV DT  VLH+V++E KE LL  HSEKLAIAFG+++T
Sbjct: 821 SHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMST 880

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G+ +RV KNLRVC+DCH ATK ISK+  R+I++RD  R+HHF +GTCSCGDYW
Sbjct: 881 PSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 186/626 (29%), Positives = 307/626 (49%), Gaps = 51/626 (8%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT-VANTLVNMYGKCGSDMWDVYKVFD 138
           +  +L+A   ++ L  G+++HAH++     L + + +A+ L+ M+ KCG ++ +   + D
Sbjct: 46  YGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCG-NLAEAEALAD 104

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           R       S  +MI      G+ D A+E F  M    V P+   L+++  ACS L     
Sbjct: 105 RFASV--YSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLG---N 156

Query: 199 LRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF---EDRDLVSWNTI 254
           L  GR++H   S R  E N+ + NAL++MY+K G + DAK  F        RD+V+WN +
Sbjct: 157 LAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAM 216

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGI-KPDGVSIASVLPAC--SHLEMLDTGKEIHAYALR 311
           +S+  +N    EA+   R M   G   P+ V+  SVL +C  + L  L+  + IH   + 
Sbjct: 217 ISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVG 276

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK----IALWNAMITGYGQNEYDE 367
             I  + +FV +ALVD Y     ++    VF    D++    +   +AMI+   QN + +
Sbjct: 277 AGIERE-AFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ 335

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNA 426
           E+L LF  M  + G  P+  T+ SV+ AC   +       +   A++ +   RD  +   
Sbjct: 336 ESLRLFFAM-NLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTT 394

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+  Y+R   +  ++  FD ++  D VSWN M   Y    +  +AL+L   M        
Sbjct: 395 LLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM-------- 446

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGAL---SALAKGKEIHAYAIRNMLATDVVVGS 543
                 L E V   +P+  T +T L  C A    +A A GK I +      L  D  V +
Sbjct: 447 ------LLEGV---RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 497

Query: 544 ALVDMYAKCGCLNFARRVFD-LMPV-RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           A ++MYAKCG L  AR VF+ + P  R+ ITWN ++ AYG HG G+E  EL + M AE  
Sbjct: 498 ATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL 557

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               VKPN+VTF+A+  A +    +++G ++  ++  + G E        ++++  + G 
Sbjct: 558 ----VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGS 612

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLG 687
           ++DA  + +      +   AW+SL+ 
Sbjct: 613 LDDAQAIFDKSSSNQEDVIAWTSLIA 638



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 169/643 (26%), Positives = 279/643 (43%), Gaps = 73/643 (11%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDN-FAFPAVLKAV--AGI 90
           LP +  R   +W   + +  R+   REA+  + +M R    P N   F +VL +   AG+
Sbjct: 202 LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGL 261

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--DMWDVY-KVFDRITEKDQVS 147
             L   + IH  +V  G    +  V   LV+ YGK GS  D W+V+ +  D       V+
Sbjct: 262 LSLEDVRAIHGRIVGAGIEREAF-VRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVT 320

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
            ++MI+   + G    +L  F  M     +PS  TLVSV  ACS L          QV  
Sbjct: 321 CSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSML----------QVGS 370

Query: 208 NSLRVGEWNTFIMNA---------LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            +  V E    +++A         L+  YA+   +  A+  F + +  D+VSWN + ++ 
Sbjct: 371 ATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAY 430

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT---GKEIHAYALRNDIL 315
            Q+ +  EA++   +M L G++P   +  + L AC+          GK I +  L    L
Sbjct: 431 LQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSL-LEEAGL 489

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALWNAMITGYGQNEYDEEALMLF 373
             ++ V +A ++MY  C  +   R VF+ IS  +     WN+M+  YG +   +EA  LF
Sbjct: 490 EGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELF 549

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             ME    + PN  T  +V+ A     +      IH   +  G   D  +QNAL++MY++
Sbjct: 550 QAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAK 609

Query: 434 MGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            G ++ ++ IFD       D ++W ++I GY   GQ   AL L   MQ            
Sbjct: 610 CGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQG--------- 660

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALV 546
                    +PN +T ++ L  C     L +G E+    +  M     ++      S +V
Sbjct: 661 --------VRPNHVTFISALTACNHGGKLEQGCEL----LSGMTPDHGILPASKHFSCIV 708

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRG 603
           D+  +CG L+ A ++ +     +VITW  ++ A     E   G+   E +  +       
Sbjct: 709 DLLGRCGRLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQL------D 762

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            EV  + +   +++AA   +G  +E   +   M D  GI   P
Sbjct: 763 PEVASSYIVLASMYAA---AGRWNEAATIRKTMLDK-GIRADP 801



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 14/186 (7%)

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAI--RNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           T   +L  CG L AL +G+ +HA+ +  R  L     + S L+ M+AKCG L  A  + D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
                +V +   +I A+  HG   + +EL   M        EV+PN    IAL  ACS  
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM--------EVRPNCHALIALVNACSCL 154

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK-AGAW 682
           G ++ G  +  ++ D    E S    A ++ +  + G + DA Q  + +P    +    W
Sbjct: 155 GNLAAGRRIHSQISDRDFEENSVLGNA-LISMYSKCGSLIDAKQAFDRLPRASKRDVVTW 213

Query: 683 SSLLGA 688
           ++++ A
Sbjct: 214 NAMISA 219


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 297/835 (35%), Positives = 485/835 (58%), Gaps = 41/835 (4%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R +Q +EA+  ++ + RS + PD++    VL   AG  + ++G+Q+H   VK G  +  
Sbjct: 78  SRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGL-VHH 136

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA--TLCRFGKWDLALEAFRM 170
           ++V N+LV+MY K G ++ D  +VFD + ++D VSWNS++   +  RF   D   E F +
Sbjct: 137 LSVGNSLVDMYTKTG-NVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFN--DQVWELFCL 193

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           M      P  +T+ +V  A +N   +  + +G Q+H   +++G E    + N+L++M +K
Sbjct: 194 MQVEGYRPDYYTVSTVIAALAN---QGAVAIGMQIHALVVKLGFETERLVCNSLISMLSK 250

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G + DA+ +F + E++D VSWN++++    N + LEA      M L G KP   + ASV
Sbjct: 251 SGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASV 310

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD-K 348
           + +C+ L+ L   + +H   L++  L  N  V +AL+     C+E++    +F  +   +
Sbjct: 311 IKSCASLKELGLVRVLHCKTLKSG-LSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQ 369

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  W AMI+GY QN   ++A+ LF  M    G+ PN  T S+++   V+   F  +  I
Sbjct: 370 SVVSWTAMISGYLQNGDTDQAVNLFSLMRR-EGVKPNHFTYSTILT--VQHAVFISE--I 424

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H   IK    +   V  AL+D + ++G I  +  +F+ +E +D ++W+ M+ GY   G+ 
Sbjct: 425 HAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGET 484

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIH 527
            +A  +  ++        R  +          KPN  T  +++  C A +A + +GK+ H
Sbjct: 485 EEAAKIFHQL-------TREGI----------KPNEFTFCSIINACTAPTASVEQGKQFH 527

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           AYAI+  L   + V S+LV +YAK G +  A  +F     R++++WN +I  Y  HG+ +
Sbjct: 528 AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAK 587

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           + LE+ + M     R  EV  + +TFI + +AC+H+G+V +G + F  M +D+ I P+ +
Sbjct: 588 KALEVFEEM---QKRNLEV--DAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTME 642

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY+C++DL  RAG +  A  +IN MP     A  W  +L A R+H+N+E+G++AA+ +  
Sbjct: 643 HYSCMIDLYSRAGMLGKAMDIINGMPFP-PAATVWRIVLAASRVHRNIELGKLAAEKIIS 701

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP  ++ YVLLSNIY++A  W + ++VRK M +  V+KEPG SWIE  ++ + FLAGD 
Sbjct: 702 LEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDL 761

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH  S+ ++  L  L+ R+R  GY PDT+ V H++ +E+KET+L  HSE+LAIAFG++ T
Sbjct: 762 SHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIAT 821

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            P   +++ KNLRVC DCH   K +S +E R I++RD  RFHHFK G CSCGDYW
Sbjct: 822 LPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 249/506 (49%), Gaps = 43/506 (8%)

Query: 189 ACSNLSRRDGLRLGR-QVHGNSLRVGEWNTFIMNALMAMYAK-LGRVDD---AKTLFKSF 243
           A +N S    LR+ R Q+H ++      N  + + ++A+ A+ L R  D   A+ LF   
Sbjct: 9   ALTNTSTNPILRIRRYQLHCHA------NPLLQSHVVALNARTLLRDSDPRFAQQLFDQT 62

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             RDL   N ++   S+ D+  EA+     +   G+ PD  +++ VL  C+       G+
Sbjct: 63  PLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGE 122

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H   ++   L+ +  VG++LVDMY     V  GRRVFD + D+ +  WN+++TGY  N
Sbjct: 123 QVHCQCVKCG-LVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWN 181

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            ++++   LF  M +V G  P+  T+S+V+ A     A      IH   +KLG   +R V
Sbjct: 182 RFNDQVWELFCLM-QVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLV 240

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            N+L+ M S+ G +  ++ +FD+ME +D+VSWN+MI G+ I GQ  +A      MQ    
Sbjct: 241 CNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQ---- 296

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                        +   KP   T  +V+  C +L  L   + +H   +++ L+T+  V +
Sbjct: 297 -------------LAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343

Query: 544 ALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           AL+    KC  ++ A  +F LM  V++V++W  +I  Y  +G+  + + L   M  EG  
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG-- 401

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              VKPN  T+  +     H+  +SE       +K +Y  E S      ++D   + G +
Sbjct: 402 ---VKPNHFTYSTILTV-QHAVFISEIHAEV--IKTNY--EKSSSVGTALLDAFVKIGNI 453

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGA 688
            DA ++  ++  E     AWS++L  
Sbjct: 454 SDAVKVFELI--ETKDVIAWSAMLAG 477



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 155/293 (52%), Gaps = 21/293 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    +A+  +  M R  ++P++F +  +L     +Q      +IHA V
Sbjct: 373 SWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFISEIHAEV 428

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  Y  SS +V   L++ + K G ++ D  KVF+ I  KD ++W++M+A   + G+ + 
Sbjct: 429 IKTNYEKSS-SVGTALLDAFVKIG-NISDAVKVFELIETKDVIAWSAMLAGYAQAGETEE 486

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A + F  +    ++P+ FT  S+  AC+  +    +  G+Q H  ++++   N   + ++
Sbjct: 487 AAKIFHQLTREGIKPNEFTFCSIINACT--APTASVEQGKQFHAYAIKLRLNNALCVSSS 544

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G ++ A  +FK  ++RDLVSWN+++S  +Q+ +  +A+    +M  R ++ D
Sbjct: 545 LVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVD 604

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG------SALVDMY 329
            ++   V+ AC+H  ++  G+         +I+I++  +       S ++D+Y
Sbjct: 605 AITFIGVISACAHAGLVGKGQNYF------NIMINDHHINPTMEHYSCMIDLY 651


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 307/826 (37%), Positives = 468/826 (56%), Gaps = 57/826 (6%)

Query: 59   REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
            +EA   + E  RS ++PD F+   +L  V+ + +   GK +   V  Y   LS       
Sbjct: 810  KEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLS------- 861

Query: 119  LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
                      D  DV+             WN  ++     G    A+E F  M   N++ 
Sbjct: 862  -------LSDDNPDVF------------CWNKKLSECLWAGDNWGAIECFVNMNGLNIDY 902

Query: 179  SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             + TL+ V  A +     D L LG+QVHG +++ G + +  + N+L+ MY+K+G    A+
Sbjct: 903  DAVTLLVVLAAVAGT---DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAR 959

Query: 238  TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL- 296
             +F   +  DL+SWN+++SS +Q+    E+V     +   G+KPD  ++ASVL ACS L 
Sbjct: 960  EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLI 1019

Query: 297  EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
            + L+  ++IH +AL+   + D SFV + L+D+Y    ++E    +F    D  +A WNAM
Sbjct: 1020 DGLNISRQIHVHALKTGNIAD-SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAM 1078

Query: 357  ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
            + GY      ++AL LF  + + +G   +  T+++   AC         + IH HAIK G
Sbjct: 1079 MFGYIIGNDGKKALELFSLIHK-SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 1137

Query: 417  LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
               D +V + ++DMY + G +  +  +F+ +   D V+W +MI+G   C  +G+    LR
Sbjct: 1138 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG---CVDNGNEDQALR 1194

Query: 477  EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
                M +               R  P+  T  T++     ++AL +G+++HA  I+    
Sbjct: 1195 IYHRMRQS--------------RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCV 1240

Query: 537  TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            +D  VG++LVDMYAKCG +  A R+F  M VRN+  WN +++    HG  +E + L K+M
Sbjct: 1241 SDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 1300

Query: 597  VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
             + G     ++P+ V+FI + +ACSH+G+ SE  +  + M +DYGIEP  +HY+C+VD L
Sbjct: 1301 KSHG-----IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDAL 1355

Query: 657  GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
            GRAG V++A ++I  MP +   A    +LLGACRI  +VE G+  A  LF LEP  ++ Y
Sbjct: 1356 GRAGLVQEADKVIETMPFKA-SASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAY 1414

Query: 717  VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
            VLLSNIY++A  WD   D RK MK   V+K+PG SWI+  + +H F+  D SH Q++ ++
Sbjct: 1415 VLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIY 1474

Query: 777  GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
              +E + + +R++GYVPDT  VL +V +EEKE  L  HSEKLAIA+G+++TP  TTIRV 
Sbjct: 1475 DKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVI 1534

Query: 837  KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC DCH A K+ISK+  REI+LRD  RFHHF++G CSCGDYW
Sbjct: 1535 KNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 282/619 (45%), Gaps = 74/619 (11%)

Query: 83   VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
            +L+      +L LGK  HA +V  G       ++N L+ MY KCGS +    +VFD   E
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHF-LSNNLLTMYSKCGS-LSSARQVFDTTPE 684

Query: 143  KDQVSWNSMIATLC-----RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            +D V+WN+++           G     L  FR++  S    +  TL  V   C N     
Sbjct: 685  RDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLN---SG 741

Query: 198  GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
             L     VHG ++++G EW+ F+  AL+ +Y+K GR+ DA+ LF    +RD+V WN ++ 
Sbjct: 742  CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLK 801

Query: 257  SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK----EIHAYALRN 312
               Q     EA     +    G++PD  S+  +L   S +   D GK    ++ AYA + 
Sbjct: 802  GYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQVQAYAAKL 860

Query: 313  DILIDNSFVGSALVDMYC-NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             +  DN        D++C N +  EC              LW     G         A+ 
Sbjct: 861  SLSDDNP-------DVFCWNKKLSEC--------------LWAGDNWG---------AIE 890

Query: 372  LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
             F+ M  +  +  +A T+  V+ A   ++     + +HG A+K GL  D  V N+L++MY
Sbjct: 891  CFVNMNGL-NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMY 949

Query: 432  SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            S+MG    ++ +F+DM+  D +SWN+MI+    C             Q+  EE++ N   
Sbjct: 950  SKMGCAYFAREVFNDMKHLDLISWNSMISS---CA------------QSSLEEESVNLFI 994

Query: 492  DLDETVLRPKPNSITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
            DL    L  KP+  TL +VL  C +L   L   ++IH +A++     D  V + L+D+Y+
Sbjct: 995  DLLHEGL--KPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYS 1052

Query: 551  KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
            K G +  A  +F      ++  WN ++  Y +  +G++ LEL   +   G      K ++
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGE-----KSDQ 1107

Query: 611  VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            +T      AC    ++ +G  + +      G +      + ++D+  + G + +A  + N
Sbjct: 1108 ITLATAAKACGCLVLLDQGKQI-HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166

Query: 671  MMPPEFDKAGAWSSLLGAC 689
             +    D   AW+S++  C
Sbjct: 1167 YISAPDDV--AWTSMISGC 1183



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 221/433 (51%), Gaps = 18/433 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD-LSLGKQIHAH 102
            SW   + S A+S+   E++  +I++    ++PD+F   +VL+A + + D L++ +QIH H
Sbjct: 972  SWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVH 1031

Query: 103  VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             +K G  ++   VA TL+++Y K G  M +   +F    + D   WN+M+          
Sbjct: 1032 ALKTG-NIADSFVATTLIDVYSKSGK-MEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089

Query: 163  LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             ALE F ++  S  +    TL + A AC  L   D    G+Q+H ++++ G + +  + +
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ---GKQIHAHAIKAGFDSDLHVNS 1146

Query: 222  ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
             ++ MY K G + +A  +F      D V+W +++S    N    +A+    +M    + P
Sbjct: 1147 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP 1206

Query: 282  DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            D  + A+++ A S +  L+ G+++HA  ++ D + D  FVG++LVDMY  C  +E   R+
Sbjct: 1207 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRL 1265

Query: 342  FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----V 397
            F  ++ + IALWNAM+ G  Q+   EEA+ LF  M+   G+ P+  +   ++ AC    +
Sbjct: 1266 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS-HGIEPDRVSFIGILSACSHAGL 1324

Query: 398  RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             SEA+   E +H      G+  +    + L+D   R G ++ +  + + M  + + S N 
Sbjct: 1325 TSEAY---EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR 1381

Query: 458  MITGYTICGQHGD 470
             + G   C   GD
Sbjct: 1382 ALLG--ACRIQGD 1392


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/708 (39%), Positives = 424/708 (59%), Gaps = 35/708 (4%)

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           +F   SV  AC  +S     +LG+++HG  L+ G + + F+ NALM MY +   V+ A+ 
Sbjct: 94  NFMAPSVLKACGQVSWT---QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARL 150

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F    +RD+VSW+T++ SLS+N +F  A+  +R+M    ++P  V++ S++   +    
Sbjct: 151 VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTAN 210

Query: 299 LDTGKEIHAYALRNDILIDNSFVG----SALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +  GK +HAY +RN    +N  +G    +AL+DMY  C  +   R++F+ ++ K +  W 
Sbjct: 211 MRMGKAMHAYVIRNS---NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWT 267

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           AMI G  ++   EE   LFI+M+E   ++PN  TM S++  C  + A    + +H + ++
Sbjct: 268 AMIAGCIRSNRLEEGTKLFIRMQE-ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILR 326

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            G      +  AL+DMY +   I  ++ +FD  + RD + W  M++ Y        A  L
Sbjct: 327 NGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNL 386

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             +M+                     +P  +T++++L  C    AL  GK +H+Y  +  
Sbjct: 387 FDQMRTSG-----------------VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER 429

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           +  D ++ +ALVDMYAKCG +N A R+F     R++  WN II  + MHG G+E L++  
Sbjct: 430 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 489

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  +G     VKPN++TFI L  ACSH+G+V+EG  LF KM   +G+ P  +HY C+VD
Sbjct: 490 EMERQG-----VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGRAG +++A+++I  MP + +    W +L+ ACR+H+N ++GE+AA  L  +EP+   
Sbjct: 545 LLGRAGLLDEAHEMIKSMPIKPNTI-VWGALVAACRLHKNPQLGELAATQLLEIEPENCG 603

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
           + VL+SNIY++A  W  A  VRK MK +G++KEPG S IE    +H+FL GD SH Q  +
Sbjct: 604 YNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRR 663

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  L  +  ++ + GYVPDTS VL N++EEEKET L  HSEKLA+AFG+++T P T IR
Sbjct: 664 INEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIR 723

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLRVCNDCH ATK +SKI  R II+RD  RFHHF+ G CSCGDYW
Sbjct: 724 IVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 256/516 (49%), Gaps = 29/516 (5%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           NF  P+VLKA   +    LGK+IH  V+K G     V V N L+ MYG+C    +    V
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD-RDVFVGNALMLMYGECACVEY-ARLV 151

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD++ E+D VSW++MI +L R  ++D+ALE  R M +  V PS   +VS+    ++ +  
Sbjct: 152 FDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTAN- 210

Query: 197 DGLRLGRQVHGNSLRVG---EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
             +R+G+ +H   +R             AL+ MYAK G +  A+ LF     + +VSW  
Sbjct: 211 --MRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 268

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++   ++++  E      +M    I P+ +++ S++  C     L  GK++HAY LRN 
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
             +  + + +ALVDMY  C ++   R +FD   ++ + +W AM++ Y Q    ++A  LF
Sbjct: 329 FSVSLA-LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M   +G+ P   T+ S++  C  + A    + +H +  K  +  D  +  AL+DMY++
Sbjct: 388 DQM-RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 446

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G I  +  +F +   RD   WN +ITG+ + G   +AL +  EM+       R  V   
Sbjct: 447 CGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME-------RQGV--- 496

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKC 552
                  KPN IT + +L  C     + +GK++    +    L   +     +VD+  + 
Sbjct: 497 -------KPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 549

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           G L+ A  +   MP++ N I W  ++ A  +H   Q
Sbjct: 550 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 585



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 215/422 (50%), Gaps = 10/422 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +RS +R+ +F  A+    EM    ++P   A  +++   A   ++ +GK +HA+V
Sbjct: 162 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 221

Query: 104 VKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           ++        V     L++MY KCG  +    ++F+ +T+K  VSW +MIA   R  + +
Sbjct: 222 IRNSNNEHMGVPTTTALLDMYAKCGH-LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 280

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
              + F  M   N+ P+  T++S+ + C        L+LG+Q+H   LR G   +  +  
Sbjct: 281 EGTKLFIRMQEENIFPNEITMLSLIVECGFTG---ALQLGKQLHAYILRNGFSVSLALAT 337

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K   + +A+ LF S ++RD++ W  ++S+ +Q +   +A     QM   G++P
Sbjct: 338 ALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             V+I S+L  C+    LD GK +H+Y  +  + +D   + +ALVDMY  C ++    R+
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVD-CILNTALVDMYAKCGDINAAGRL 456

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F     + I +WNA+ITG+  + Y EEAL +F +ME   G+ PN  T   ++ AC  +  
Sbjct: 457 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER-QGVKPNDITFIGLLHACSHAGL 515

Query: 402 FPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
             + + +    +   GL         ++D+  R G ++ +  +   M ++ +T+ W  ++
Sbjct: 516 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575

Query: 460 TG 461
             
Sbjct: 576 AA 577



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 18/229 (7%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           +Q R    W   L + A++N   +A   + +M  S ++P      ++L   A    L LG
Sbjct: 359 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 418

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K +H+++ K    +  + +   LV+MY KCG D+    ++F     +D   WN++I    
Sbjct: 419 KWVHSYIDKERVEVDCI-LNTALVDMYAKCG-DINAAGRLFIEAISRDICMWNAIITGFA 476

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
             G  + AL+ F  M    V+P+  T + +  ACS+         G    G  L     +
Sbjct: 477 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH--------AGLVTEGKKLFEKMVH 528

Query: 217 TFIM-------NALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
           TF +         ++ +  + G +D+A  + KS   + + + W  +V++
Sbjct: 529 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 314/886 (35%), Positives = 493/886 (55%), Gaps = 92/886 (10%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           LLP+P   S   H    TT   L   G  +  K + I +  +                  
Sbjct: 26  LLPNPNSKSFSAHFGHTTTTIKLKFNGPDSP-KPTSIHTKPA------------------ 66

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK--CG 127
            SD+ P    + ++++          GK IH  ++  GY   +  +   L+ +Y +  C 
Sbjct: 67  -SDVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILM-LYARSGCL 122

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+    K+F+ + E++  +WN+MI    R   +  A   F  ML   V P +FT  S  
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASAL 182

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED- 245
             C  L  RDG   G+QVH   +  G + +TF+ NAL+ MYAK    DD ++  K F++ 
Sbjct: 183 RVCGALRSRDG---GKQVHSKLIACGFKGDTFVGNALIDMYAK---CDDEESCLKVFDEM 236

Query: 246 --RDLVSWNTIVSSLSQNDKFLEA-VMFLR-QMALRGIKPDGVSIASVLPACSHLEMLDT 301
             R+ V+WN+I+S+ +Q   F +A V+FLR Q +  GI+PD  +  ++L  C++    + 
Sbjct: 237 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQ 296

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G++IHA+ +R +I   N  V + LV MY  C  +   + +F+ ++++    WN+MI GY 
Sbjct: 297 GRQIHAHLIRANI-TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 355

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QN   +EAL LF +M+ + G+ P+  ++SS++ +CV          +H   ++  +  + 
Sbjct: 356 QNGETQEALRLFKQMQ-LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 414

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
            +Q  L+DMY++ G ++ +  ++D    + R+T  WN+++ GY   G   ++     EM 
Sbjct: 415 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEML 474

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
             + E      YD+           +T++T++                     N+L    
Sbjct: 475 ESDIE------YDV-----------LTMVTIV---------------------NLL---- 492

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           V+ +ALVDMY+KCG +  AR VFD M  +N+++WN +I  Y  HG  +E L L + M  +
Sbjct: 493 VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKK 552

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     + PNEVTF+A+ +ACSH+G+V EG+ +F  M++DY IE   +HY C+VDLLGRA
Sbjct: 553 G-----MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRA 607

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G++EDA + +  MP E  +   W +LLGACR+H+++++G +AAQ LF L+P     YV++
Sbjct: 608 GRLEDAKEFVEKMPIE-PEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY++A  W +  D+R+ MK  GV+K+PG SWIE   EI  F AG  +H ++E+++  L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNE---EEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            +L+ + +  GY+PDTS +L NV +   EE+E  L  HSE+LA++ G+++ P  +TIRV 
Sbjct: 727 RHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVF 786

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLR+C DCH ATKFISKI  R II RD  RFHHF+NG CSCGDYW
Sbjct: 787 KNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 292/789 (37%), Positives = 464/789 (58%), Gaps = 38/789 (4%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K++HA ++ +G    ++ ++  L+N+Y   G D+      FD I +K+  SWNS+I+   
Sbjct: 39  KKLHALLLVFGKS-QNIVLSTKLINLYVTHG-DISLSRSTFDYIHKKNIFSWNSIISAYV 96

Query: 157 RFGKWDLAL----EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           RFGK+  A+    + F M    ++ P  +T   +  AC +L        G++VH    ++
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD------GKKVHCCVFKM 150

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E + F+  +L+ +Y++ G +D A  +F     +D+ SWN ++S   QN     A+  L
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M   G+K D +++AS+LP C+  + +  G  IH + L++  L  + FV +AL++MY  
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG-LDSDVFVSNALINMYSK 269

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              ++  + VFD +  + +  WN++I  Y QN  D    + F K  ++ G+ P+  T+ S
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN-DPSTALRFFKGMQLGGIRPDLLTVVS 328

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +     +         I G  I+   L +D  + NAL++MY+++G +  + T+FD +  +
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           DT+SWNT++TGYT  G   +A+    +  NM EE  R+ +           PN  T +++
Sbjct: 389 DTISWNTLVTGYTQNGLASEAI----DAYNMMEE-CRDTI-----------PNQGTWVSI 432

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           +P    + AL +G +IHA  I+N L  DV V + L+D+Y KCG L  A  +F  +P    
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN II + G+HG G+E L+L K+M+AE      VK + +TF++L +ACSHSG+V EG 
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAE-----RVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             F  M+ +YGI+PS  HY C+VDLLGRAG +E AY+L+  MP + D A  W +LL AC+
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPD-ASIWGALLSACK 606

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           I+ N E+G +A+  L  ++ +   +YVLLSNIY++ + W+  + VR   ++ G+RK PG 
Sbjct: 607 IYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGW 666

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S +  G +   F  G+ +H +  +++  L+ LS +M+  GYVPD S V  ++ E+EKE +
Sbjct: 667 SSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQI 726

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSE+LAIAFGI++TPP + IR+ KNLRVC DCH ATK+IS+I  REI++RD  RFHH
Sbjct: 727 LNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHH 786

Query: 871 FKNGTCSCG 879
           FK+G CSC 
Sbjct: 787 FKDGICSCA 795



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 297/622 (47%), Gaps = 49/622 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR----SDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           SW   + +  R  ++ EA+    ++        ++PD + FP +LKA   + D   GK++
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKV 143

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRF 158
           H  V K G+    V VA +LV++Y + G  + DV +KVF  +  KD  SWN+MI+  C+ 
Sbjct: 144 HCCVFKMGFE-DDVFVAASLVHLYSRYG--VLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G    AL     M    V+  + T+ S+   C   ++ D +  G  +H + L+ G + + 
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVC---AQSDDVINGVLIHLHVLKHGLDSDV 257

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NAL+ MY+K GR+ DA+ +F   E RDLVSWN+I+++  QN+    A+ F + M L 
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GI+PD +++ S+    S L      + I  + +R + L  +  +G+ALV+MY     + C
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              VFD +  K    WN ++TGY QN    EA+  +  MEE     PN  T  S++PA  
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              A      IH   IK  L  D +V   L+D+Y + GR+E + ++F ++    +V WN 
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I    I G+  +AL L ++M              L E   R K + IT +++L  C   
Sbjct: 498 IIASLGIHGRGEEALQLFKDM--------------LAE---RVKADHITFVSLLSACSHS 540

Query: 518 SALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVI 571
             + +G++        Y I+  L         +VD+  + G L  A  +   MP++ +  
Sbjct: 541 GLVDEGQKCFDIMQKEYGIKPSLKH----YGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            W  ++ A  ++G  +     L  + ++  R  EV    V +  L +    +    EG+ 
Sbjct: 597 IWGALLSACKIYGNAE-----LGTLASD--RLLEVDSENVGYYVLLSNIYANTEKWEGVI 649

Query: 632 LFYKMKDDYGIEPSPDHYACVV 653
               +  D G+  +P   + VV
Sbjct: 650 KVRSLARDRGLRKTPGWSSVVV 671


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 297/811 (36%), Positives = 465/811 (57%), Gaps = 35/811 (4%)

Query: 76   DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV--ANTLVNMYGKCGSDMWDV 133
            D++A+  +L+      D   G+ +H HVV+ G GL+ + +  AN L+NMY K G      
Sbjct: 427  DSYAYARLLQGCVARGDARGGRAVHGHVVRSG-GLARLDLFCANVLLNMYTKVGP-FGSA 484

Query: 134  YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            ++VFD + E++ VS+ +++      G+++ A   F+ + +   E + F L +V      +
Sbjct: 485  HRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAM 544

Query: 194  SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
               D L L   VH  + ++G + N F+ +AL+  Y+  G V DA+ +F     +D V+W 
Sbjct: 545  ---DTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWT 601

Query: 253  TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
             +VS  S+ND     +    +M +   K +  ++ SVL A   L  +  GK IHA +++ 
Sbjct: 602  AMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT 661

Query: 313  DILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              L D    V  AL+DMY  C  +E  R  F+ +++  + LW+ MI+ Y Q   +E+A  
Sbjct: 662  --LYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFE 719

Query: 372  LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
            LFI+M   + + PN  ++SSV+ AC         + IH HAIK+G   + +V NAL+D+Y
Sbjct: 720  LFIRMMR-SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLY 778

Query: 432  SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            ++   +E S  IF  +   + VSWNT+I GY+  G    AL + REM+       +    
Sbjct: 779  AKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQ---- 834

Query: 492  DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                         +T  +VL  C + +++    ++H    ++   +D +V ++L+D YAK
Sbjct: 835  -------------VTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAK 881

Query: 552  CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            CGC+  AR +F+ +   ++++WN II  Y +HG+     EL  +M+++ S    +K N++
Sbjct: 882  CGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELF-DMMSKNS----IKANDI 936

Query: 612  TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
            TF+AL + C  +G+VS+G+ LF  M+ D+GIEPS +HY C+V LLGRAG++ DA   I  
Sbjct: 937  TFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGD 996

Query: 672  MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
            +P     A  W +LL +C +H+NVE+G  +A+ +  +EP   + YVLLSN+YS+A   D+
Sbjct: 997  IPSA-PSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQ 1055

Query: 732  AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
                RK M+ +GVRKEPG SW+E   E+H F  G   H     ++  LE L+ +  +EGY
Sbjct: 1056 VAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGY 1115

Query: 792  VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
            VPDT  VLH++ EE+K  +L  HSE+LA+A+G++ TPPG  IR+ KNLR C DCH   K 
Sbjct: 1116 VPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKV 1175

Query: 852  ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ISKI  +EII+RD+ RFHHF+ GTCSCGDYW
Sbjct: 1176 ISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 300/618 (48%), Gaps = 42/618 (6%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G   R   S++  ++  A   +F EA   +  +     + + F    VLK V  +  L L
Sbjct: 490  GLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGL 549

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
               +HA   K G+  ++  V + L++ Y  CG  + D  +VFD I  KD V+W +M++  
Sbjct: 550  AWGVHACACKLGHDRNAF-VGSALIDAYSMCGV-VSDARRVFDGIVGKDAVAWTAMVSCY 607

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
                  +  L+ F  M  +  + + F L SV  A   LS    + LG+ +H  S++ + +
Sbjct: 608  SENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLS---SVVLGKGIHACSVKTLYD 664

Query: 215  WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
                +  AL+ MYAK G ++DA+  F+   + D++ W+ ++S  +Q ++  +A     +M
Sbjct: 665  TERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM 724

Query: 275  ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS---FVGSALVDMYCN 331
                + P+  S++SVL AC+++ +LD GK+IH +A++    I +    FVG+AL+D+Y  
Sbjct: 725  MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIK----IGHESELFVGNALIDLYAK 780

Query: 332  CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
            C ++E    +F  + D     WN +I GY ++ + E AL +F +M   A +     T SS
Sbjct: 781  CSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREM-RAASVPSTQVTYSS 839

Query: 392  VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
            V+ AC  + +      +H    K     D  V N+L+D Y++ G I  ++ IF+ ++  D
Sbjct: 840  VLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECD 899

Query: 452  TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
             VSWN +I+GY +   HG A M     Q + +  ++N++          K N IT + +L
Sbjct: 900  LVSWNAIISGYAV---HGQAAM----AQELFDMMSKNSI----------KANDITFVALL 942

Query: 512  PGCGALSALAKGKEIH-AYAIRNMLATDVVVGSALVDMYAKCGCLNFARR-VFDLMPVRN 569
              CG+   +++G  +  +  + + +   +   + +V +  + G LN A   + D+    +
Sbjct: 943  SVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPS 1002

Query: 570  VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSE 628
             + W  ++ +  +H   +     L    AE  +  E++P +E T++ L    S +G + +
Sbjct: 1003 AMVWRALLSSCIVHKNVE-----LGRFSAE--KVLEIEPQDETTYVLLSNMYSAAGSLDQ 1055

Query: 629  GMDLFYKMKDDYGIEPSP 646
             +  F K   + G+   P
Sbjct: 1056 -VAFFRKSMRNIGVRKEP 1072



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNF 557
           P  +S     +L GC A      G+ +H + +R+  +   D+   + L++MY K G    
Sbjct: 424 PGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGS 483

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           A RVFD +P RN++++  ++  + + GE +E   L + +  EG
Sbjct: 484 AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEG 526


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/691 (37%), Positives = 413/691 (59%), Gaps = 25/691 (3%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           N +R       +Q+H   +R    +    + ++++Y  L  + +A  +FK+ E   +++W
Sbjct: 14  NPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAW 73

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++   +    F  A+    +M   G  PD     SVL +C+ +  L  G+ +H + +R
Sbjct: 74  KSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             +  D  + G+AL++MY     ++  R+VF+ +  K +  +N +I GY Q+   E+AL 
Sbjct: 134 LGMDCD-LYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALR 192

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +  +M   + L P+A T+SSV+P           + IHG+ I+ G+  D Y+ ++L+DMY
Sbjct: 193 MVREMG-TSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMY 251

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++  RIE S+ +F  +  RD++SWN+++ GY   G++ +AL L R+M +           
Sbjct: 252 AKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSA---------- 301

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                  + +P ++   +V+P C  L+ L  GK++H Y +R     ++ + SALVDMY+K
Sbjct: 302 -------KVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSK 354

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG +  AR++FD M + + ++W  IIM + +HG G E + L + M  +G     VKPN+V
Sbjct: 355 CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-----VKPNQV 409

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
            F+A+  ACSH G+V E    F  M   YG+    +HYA V DLLGRAGK+E+AY  I+ 
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISK 469

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           M  E      WS+LL +C +H+N+E+ E  A+ +F ++ +    YVL+ N+Y+S   W +
Sbjct: 470 MRVE-PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKE 528

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              +R ++++ G+RK+P CSWIE  ++ H F++GD SH   ++++ FL+ + E+M KEGY
Sbjct: 529 MAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGY 588

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           V DTS VLH+V+EE K  LL GHSE+LA+AFGI+NT PGTTIRV KN+R+C DCH A KF
Sbjct: 589 VADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKF 648

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISKI  REII+RD  RFHHF  G+CSCGDYW
Sbjct: 649 ISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 232/425 (54%), Gaps = 12/425 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R     + F  A+ S++EM  S   PD+  FP+VLK+   + DL  G+ +H  +
Sbjct: 72  AWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131

Query: 104 VKYGYGLSSVTVANTLVNMYGK-CGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+ G      T  N L+NMY K  G D   V KVF+ +  KD VS+N++IA   + G ++
Sbjct: 132 VRLGMDCDLYT-GNALMNMYSKLLGID--SVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL   R M  S+++P +FTL SV    S     D L+ G+++HG  +R G + + +I +
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYV--DVLK-GKEIHGYVIRKGIDSDVYIGS 245

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK  R++D++ +F     RD +SWN++V+   QN ++ EA+   RQM    ++P
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             V+ +SV+PAC+HL  L  GK++H Y LR      N F+ SALVDMY  C  ++  R++
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGG-FGRNIFIASALVDMYSKCGNIQAARKI 364

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD ++      W A+I G+  + +  EA+ LF +M+   G+ PN     +V+ AC     
Sbjct: 365 FDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR-QGVKPNQVAFVAVLTACSHVGL 423

Query: 402 FPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
             +  G      K+ GL ++     A+ D+  R G++E +      M V  T S W+T++
Sbjct: 424 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLL 483

Query: 460 TGYTI 464
           +  ++
Sbjct: 484 SSCSV 488


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/833 (36%), Positives = 473/833 (56%), Gaps = 55/833 (6%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           +++P+  A  A++ A + + +L+ G++IH+ +    +  +SV + N L++MY KCGS + 
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSV-LGNALISMYSKCGS-LI 59

Query: 132 DVYKVFDRI---TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP-SSFTLVSVA 187
           D  + FDR+   +++D V+WN+MI+   R G    AL+ FR M +    P +S T VSV 
Sbjct: 60  DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVL 119

Query: 188 LACSN---LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            +C     LS  D     R +HG  +  G E   F+  AL+  Y KLG +DDA  +F   
Sbjct: 120 DSCVEAGLLSLEDV----RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRK 175

Query: 244 EDRD----LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            D +    LV+ + ++S+  QN    E++     M L G KP GV++ SVL ACS L + 
Sbjct: 176 SDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVG 235

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
                +   A+       ++ +G+ L+  Y    ++   R  FD I    +  WNAM   
Sbjct: 236 SATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAA 295

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG------IHGHAI 413
           Y Q+    EAL+LF +M  + G+ P+  T  + + AC    A+P +        I     
Sbjct: 296 YLQHHRPREALVLFERML-LEGVRPSVATFITALTACA---AYPPQTASAIGKRIQSLLE 351

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQHGDA 471
           + GL  D  V NA ++MY++ G +  ++ +F+ +    RD ++WN+M+  Y   G HG  
Sbjct: 352 EAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAY---GHHGLG 408

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
                  Q ME EK               KPN +T + VL    + +++A+G+EIHA  +
Sbjct: 409 KEAFELFQAMEAEK-------------LVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 455

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQEV 589
            N   +D V+ +AL++MYAKCG L+ A+ +FD       +VI W  ++  Y  +G+ +  
Sbjct: 456 SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERA 515

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L+L   M  +G     V+PN +TFI+   AC+H G + +G +L   M  D+GI P+  H+
Sbjct: 516 LKLFWTMQQQG-----VRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHF 570

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           +C+VDLLGR G++++A +L+            W +LL AC+  + +E GE  A+ +  L+
Sbjct: 571 SCIVDLLGRCGRLDEAEKLLERTSQA--DVITWMALLDACKNSKELERGERCAERIMQLD 628

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
           P+VAS Y++L+++Y++A  W++A  +RK M + G+R +PGCS +E   E+H F AGD SH
Sbjct: 629 PEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSH 688

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
            +SE+++  LE L   ++  GYV DT  VLH+V++E KE LL  HSEKLAIAFG+++TP 
Sbjct: 689 PKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPS 748

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+ +RV KNLRVC+DCH ATK ISK+  R+I++RD  R+HHF +GTCSCGDYW
Sbjct: 749 GSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 166/636 (26%), Positives = 275/636 (43%), Gaps = 59/636 (9%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDN-FAFPAVLKAV--AGI 90
           LP +  R   +W   + +  R+   REA+  + +M      P N   F +VL +   AG+
Sbjct: 68  LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGL 127

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--DMWDVY-KVFDRITEKDQVS 147
             L   + IH  +V  G    +  V   LV+ YGK GS  D W+V+ +  D       V+
Sbjct: 128 LSLEDVRAIHGRIVGAGIEREAF-VRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVT 186

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
            ++MI+   + G    +L  F  M     +PS  TLVSV  ACS L           V  
Sbjct: 187 CSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAF---VLE 243

Query: 208 NSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            ++ V     +  +   L+  YA+   +  A+  F + +  D+VSWN + ++  Q+ +  
Sbjct: 244 QAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPR 303

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT---GKEIHAYALRNDILIDNSFVG 322
           EA++   +M L G++P   +  + L AC+          GK I +  L    L  ++ V 
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSL-LEEAGLEGDTAVA 362

Query: 323 SALVDMYCNCREVECGRRVFDFISDKK--IALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           +A ++MY  C  +   R VF+ IS  +     WN+M+  YG +   +EA  LF  ME   
Sbjct: 363 NATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 422

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PN  T  +V+ A     +      IH   +  G   D  +QNAL++MY++ G ++ +
Sbjct: 423 LVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDA 482

Query: 441 KTIFDDMEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           + IFD       D ++W +++ GY   GQ   AL L   MQ                   
Sbjct: 483 QAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQG---------------- 526

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCG 553
             +PN IT ++ L  C     L +G E+    +  M     +V      S +VD+  +CG
Sbjct: 527 -VRPNHITFISALTACNHGGKLEQGCEL----LSGMTPDHGIVPASKHFSCIVDLLGRCG 581

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNE 610
            L+ A ++ +     +VITW  ++ A     E   G+   E +  +        EV  + 
Sbjct: 582 RLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQL------DPEVASSY 635

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +   +++AA   +G  +E   +   M D  GI   P
Sbjct: 636 IVLASMYAA---AGRWNEAATIRKTMLDK-GIRADP 667


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/835 (36%), Positives = 472/835 (56%), Gaps = 40/835 (4%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           AR     E +  +    R  +  D+     VLKA   + D  LG+Q+H   VK G+    
Sbjct: 75  ARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+   +LV+MY KCGS + +  +VF+ + +K+ V+W S++            +  F  M 
Sbjct: 135 VSAGTSLVDMYMKCGS-VCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              + P+ FT  SV    S ++ +  L LG++VH  S++ G   + F+ N+LM MYAK G
Sbjct: 194 AEGIWPNPFTFASVL---SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V+DAK++F   E RD+VSWNT+++ L  N+  LEA+    +      K    + A+V+ 
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKI 350
            C++L+ L   +++H+  L++   +  + V +AL D Y  C E+     +F   +  + +
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGN-VMTALADAYSKCGELADALNIFSMTTGSRNV 369

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W A+I+G  QN     A++LF +M E   + PN  T S+++ A +     P +  IH 
Sbjct: 370 VSWTAIISGCIQNGDIPLAVVLFSRMRE-DRVMPNEFTYSAMLKASL--SILPPQ--IHA 424

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             IK       +V  AL+  YS+ G  E + +IF  +E +D V+W+ M++ +   G    
Sbjct: 425 QVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEG 484

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAY 529
           A  L  +M                  +   KPN  T+ +V+  C   SA + +G++ HA 
Sbjct: 485 ATYLFNKM-----------------AIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           +I+      + V SALV MY++ G ++ A+ VF+    R++++WN +I  Y  HG   + 
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +E  + M A G     ++ + VTF+A+   C+H+G+V EG   F  M  D+ I P+ +HY
Sbjct: 588 IETFRQMEASG-----IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY 642

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGACRIHQNVEIGEIAAQNLFL 707
           AC+VDL  RAGK+++   LI  MP     AGA  W +LLGACR+H+NVE+G+ +A  L  
Sbjct: 643 ACMVDLYSRAGKLDETMSLIRDMP---FPAGAMVWRTLLGACRVHKNVELGKFSADKLLS 699

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP  +S YVLLSNIY++A  W +  +VRK M    V+KE GCSWI+  +++H F+A D 
Sbjct: 700 LEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDK 759

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH  S+Q++  L+ +  R++++GY P+TS VLH++ E++KE +L  HSE+LA+AFG++ T
Sbjct: 760 SHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIAT 819

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPGT +++ KNLRVC DCH   K +S IE REII+RD  RFHHF  G CSCGD+W
Sbjct: 820 PPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 167/550 (30%), Positives = 269/550 (48%), Gaps = 43/550 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   A +    E +  +  M    I P+ F F +VL AVA    L LG+++HA  
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQS 227

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G   SSV V N+L+NMY KCG  + D   VF+ +  +D VSWN+++A L +  + +L
Sbjct: 228 VKFGC-RSSVFVCNSLMNMYAKCGL-VEDAKSVFNWMETRDMVSWNTLMAGL-QLNECEL 284

Query: 164 -ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+ F     +  + +  T  +V   C+NL +   L L RQ+H   L+ G      +M 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQ---LALARQLHSCVLKHGFHLTGNVMT 341

Query: 222 ALMAMYAKLGRVDDAKTLFK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           AL   Y+K G + DA  +F  +   R++VSW  I+S   QN     AV+   +M    + 
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+  + +++L A   L +L    +IHA  ++ +      FVG+AL+  Y      E    
Sbjct: 402 PNEFTYSAMLKA--SLSILP--PQIHAQVIKTNYQ-HIPFVGTALLASYSKFGSTEDALS 456

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I  K +  W+AM++ + Q    E A  LF KM  + G+ PN  T+SSV+ AC    
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKM-AIQGIKPNEFTISSVIDACACPS 515

Query: 401 AFPDKEGIHGHAIKLGLGRDRY-----VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           A  D +G   HAI +   + RY     V +AL+ MYSR G I+ ++ +F+    RD VSW
Sbjct: 516 AGVD-QGRQFHAISI---KYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N+MI+GY    QHG ++  +   + ME                  + + +T + V+ GC 
Sbjct: 572 NSMISGY---AQHGYSMKAIETFRQMEASG--------------IQMDGVTFLAVIMGCT 614

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPV-RNVITW 573
               + +G++     +R+      +   A +VD+Y++ G L+    +   MP     + W
Sbjct: 615 HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVW 674

Query: 574 NVIIMAYGMH 583
             ++ A  +H
Sbjct: 675 RTLLGACRVH 684



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 210/479 (43%), Gaps = 49/479 (10%)

Query: 223 LMAMYAKLGRVDD---------AKTLFKSFEDRDL-VSWNTIVSSLSQNDKFLEAVMFLR 272
           L+A  A   RV+D         A+        RD  V  N ++   ++    LE +    
Sbjct: 29  LLATRASPARVEDGVCLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFS 88

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
                G+  D  +++ VL AC  +     G+++H   ++          G++LVDMY  C
Sbjct: 89  VARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKC 148

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V  G  VF+ +  K +  W +++TG    +   E + LF +M    G+WPN  T +SV
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRM-RAEGIWPNPFTFASV 207

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + A     A    + +H  ++K G     +V N+LM+MY++ G +E +K++F+ ME RD 
Sbjct: 208 LSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDM 267

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VSWNT++ G  +     +AL L  E        +R  +  + ++         T  TV+ 
Sbjct: 268 VSWNTLMAGLQLNECELEALQLFHE--------SRATMGKMTQS---------TYATVIK 310

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVI 571
            C  L  LA  +++H+  +++       V +AL D Y+KCG L  A  +F +    RNV+
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVV 370

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  II     +G+    + L   M     R   V PNE T+         S M+   + 
Sbjct: 371 SWTAIISGCIQNGDIPLAVVLFSRM-----REDRVMPNEFTY---------SAMLKASLS 416

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLL----GRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           +         I+ +  H   V   L     + G  EDA  +  M+  E     AWS++L
Sbjct: 417 ILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMI--EQKDVVAWSAML 473


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 310/815 (38%), Positives = 442/815 (54%), Gaps = 77/815 (9%)

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSW-NSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           V  Y +CG+    V  +   I     V W N++I    + G  D  L  +  M      P
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             +T   V  AC  +     LR G  VH      G   N FI N+++AMY + G +DDA 
Sbjct: 126 DHYTFPFVLKACGEIP---SLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAH 182

Query: 238 TLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---GIKPDGVSIASVLP 291
            +F    +R   D+VSWN+I+++  Q  +   A+    +M       ++PD +++ ++LP
Sbjct: 183 QMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           AC+ +  L  GK++H +++RN  L+D+ FVG+ALV MY  C ++    +VF+ I  K + 
Sbjct: 243 ACASVFALQHGKQVHGFSVRNG-LVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVV 301

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEE--------------------------------- 378
            WNAM+TGY Q    + AL LF  M+E                                 
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM 361

Query: 379 -VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK--LGLG-----RDRYVQNALMDM 430
            + GL PN  T++S++  C    A    +  H + IK  L L       D  V N L+DM
Sbjct: 362 QLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDM 421

Query: 431 YSRMGRIEISKTIFDDMEVRD--TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           Y++     ++++IFD +E +D   V+W  MI GY   G+  DAL L  ++      K + 
Sbjct: 422 YAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQI-----FKQKT 476

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV-VGSALVD 547
           ++          KPN+ TL   L  C  L  L  G+++HAYA+RN   ++V+ VG+ L+D
Sbjct: 477 SL----------KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLID 526

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+K G ++ AR VFD M +RNV++W  ++  YGMHG G+E L L   M   G       
Sbjct: 527 MYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLG-----FA 581

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            + +TF+ +  ACSHSGMV +GM  F+ M   +GI P  +HYAC+VDLLGRAG++ +A +
Sbjct: 582 VDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAME 641

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  M  E   A  W +LL A RIH N+E+GE AA  L  L  +    Y LLSN+Y++A+
Sbjct: 642 LIKNMSME-PTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANAR 700

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W     +R  MK  G+RK PGCSWI+       F  GD SH +SEQ++  L +L +R++
Sbjct: 701 RWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIK 760

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
             GYVP TS  LH+V++EEK  LL  HSEKLA+A+GIL T PG  IR+ KNLR+C DCH 
Sbjct: 761 DMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHS 820

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A  +IS I   EI+LRD  RFHHFK G+CSC  YW
Sbjct: 821 ALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 144/272 (52%), Gaps = 18/272 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     EA+  + +M    ++P+     ++L   A +  L  GKQ HA+V
Sbjct: 337 TWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYV 396

Query: 104 VKYGYGLS------SVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQ--VSWNSMIAT 154
           +K    L+       + V N L++MY KC S  + V + +FD I  KD+  V+W  MI  
Sbjct: 397 IKNILNLNWNDKEDDLLVLNGLIDMYAKCKS--YRVARSIFDSIEGKDKNVVTWTVMIGG 454

Query: 155 LCRFGKWDLALEAFRMML--YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
             + G+ + AL+ F  +    ++++P++FTL    +AC+ L     LRLGRQ+H  +LR 
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGE---LRLGRQLHAYALRN 511

Query: 213 GEWN--TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
              +   ++ N L+ MY+K G +D A+ +F + + R++VSW ++++    + +  EA+  
Sbjct: 512 ENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHL 571

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             QM   G   DG++   VL ACSH  M+D G
Sbjct: 572 FDQMQKLGFAVDGITFLVVLYACSHSGMVDQG 603



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 9/219 (4%)

Query: 44  SWIESLRSEARSNQFREAI--LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           +W   +   A+  +  +A+   + I   ++ ++P+ F     L A A + +L LG+Q+HA
Sbjct: 447 TWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHA 506

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           + ++       + V N L++MY K G D+     VFD +  ++ VSW S++      G+ 
Sbjct: 507 YALRNENESEVLYVGNCLIDMYSKSG-DIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRG 565

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG--LRLGRQVHGNSLRVGEWNTFI 219
           + AL  F  M          T + V  ACS+    D   +     V G  +  G  +   
Sbjct: 566 EEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYAC 625

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           M  L+    + GR+++A  L K+   +   V W  ++S+
Sbjct: 626 MVDLL---GRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/835 (36%), Positives = 471/835 (56%), Gaps = 40/835 (4%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           AR     E +  +    R  +  D+     VLKA   + D  LG+Q+H   VK G+    
Sbjct: 75  ARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+   +LV+MY KCGS + +  +VF+ + +K+ V+W S++            +  F  M 
Sbjct: 135 VSAGTSLVDMYMKCGS-VCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              + P+ FT  SV    S ++ +  L LG++VH  S++ G   + F+ N+LM MYAK G
Sbjct: 194 AEGIWPNPFTFASVL---SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V+DAK++F   E RD+VSWNT+++ L  N+  LEA+    +      K    + A+V+ 
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKI 350
            C++L+ L   +++H+  L++   +  + V +AL D Y  C E+     +F   +  + +
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGN-VMTALADAYSKCGELADALNIFSMTTGSRNV 369

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W A+I+G  QN     A++LF +M E   + PN  T S+++ A +     P +  IH 
Sbjct: 370 VSWTAIISGCIQNGDIPLAVVLFSRMRE-DRVMPNEFTYSAMLKASL--SILPPQ--IHA 424

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             IK        V  AL+  YS+ G  E + +IF  +E +D V+W+ M++ +   G    
Sbjct: 425 QVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEG 484

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAY 529
           A  L  +M                  +   KPN  T+ +V+  C   SA + +G++ HA 
Sbjct: 485 ATYLFNKM-----------------AIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           +I+      + V SALV MY++ G ++ A+ VF+    R++++WN +I  Y  HG   + 
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +E  + M A G     ++ + VTF+A+   C+H+G+V EG   F  M  D+ I P+ +HY
Sbjct: 588 IETFRQMEASG-----IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY 642

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGACRIHQNVEIGEIAAQNLFL 707
           AC+VDL  RAGK+++   LI  MP     AGA  W +LLGACR+H+NVE+G+ +A  L  
Sbjct: 643 ACMVDLYSRAGKLDETMSLIRDMP---FPAGAMVWRTLLGACRVHKNVELGKFSADKLLS 699

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP  +S YVLLSNIY++A  W +  +VRK M    V+KE GCSWI+  +++H F+A D 
Sbjct: 700 LEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDK 759

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH  S+Q++  L+ +  R++++GY P+TS VLH++ E++KE +L  HSE+LA+AFG++ T
Sbjct: 760 SHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIAT 819

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPGT +++ KNLRVC DCH   K +S IE REII+RD  RFHHF  G CSCGD+W
Sbjct: 820 PPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 167/550 (30%), Positives = 269/550 (48%), Gaps = 43/550 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   A +    E +  +  M    I P+ F F +VL AVA    L LG+++HA  
Sbjct: 168 TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQS 227

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G   SSV V N+L+NMY KCG  + D   VF+ +  +D VSWN+++A L +  + +L
Sbjct: 228 VKFGC-RSSVFVCNSLMNMYAKCGL-VEDAKSVFNWMETRDMVSWNTLMAGL-QLNECEL 284

Query: 164 -ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+ F     +  + +  T  +V   C+NL +   L L RQ+H   L+ G      +M 
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQ---LALARQLHSCVLKHGFHLTGNVMT 341

Query: 222 ALMAMYAKLGRVDDAKTLFK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           AL   Y+K G + DA  +F  +   R++VSW  I+S   QN     AV+   +M    + 
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+  + +++L A   L +L    +IHA  ++ +     S VG+AL+  Y      E    
Sbjct: 402 PNEFTYSAMLKA--SLSILP--PQIHAQVIKTNYQHIPS-VGTALLASYSKFGSTEDALS 456

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I  K +  W+AM++ + Q    E A  LF KM  + G+ PN  T+SSV+ AC    
Sbjct: 457 IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKM-AIQGIKPNEFTISSVIDACACPS 515

Query: 401 AFPDKEGIHGHAIKLGLGRDRY-----VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           A  D +G   HAI +   + RY     V +AL+ MYSR G I+ ++ +F+    RD VSW
Sbjct: 516 AGVD-QGRQFHAISI---KYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N+MI+GY    QHG ++  +   + ME                  + + +T + V+ GC 
Sbjct: 572 NSMISGY---AQHGYSMKAIETFRQMEASG--------------IQMDGVTFLAVIMGCT 614

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPV-RNVITW 573
               + +G++     +R+      +   A +VD+Y++ G L+    +   MP     + W
Sbjct: 615 HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVW 674

Query: 574 NVIIMAYGMH 583
             ++ A  +H
Sbjct: 675 RTLLGACRVH 684


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 300/794 (37%), Positives = 461/794 (58%), Gaps = 35/794 (4%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           ++++ KQ+HA ++  G     V +   LV +Y   G D+      F  I  K+  SWNSM
Sbjct: 63  NINVAKQLHALLLVLGKA-QDVVLLTQLVTLYATLG-DLSLSSTTFKHIQRKNIFSWNSM 120

Query: 152 IATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           ++   R G++  +++    +L  S V P  +T   V  AC +L+       G ++H   L
Sbjct: 121 VSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD------GEKMHCWVL 174

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           ++G E + ++  +L+ +Y++ G V+ A  +F     RD+ SWN ++S   QN    EA+ 
Sbjct: 175 KMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALR 234

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            L +M    +K D V+++S+LP C+    +  G  +H Y +++ +  D  FV +AL++MY
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESD-VFVSNALINMY 293

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                ++  +RVFD +  + +  WN++I  Y QN+    AL  F +M  V G+ P+  T+
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFV-GMRPDLLTV 352

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            S+     +         +HG  ++   L  D  + NAL++MY+++G I+ ++ +F+ + 
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            RD +SWNT+ITGY   G   +A+    +  NM EE           T++   PN  T +
Sbjct: 413 SRDVISWNTLITGYAQNGLASEAI----DAYNMMEE---------GRTIV---PNQGTWV 456

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++LP    + AL +G +IH   I+N L  DV V + L+DMY KCG L  A  +F  +P  
Sbjct: 457 SILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQE 516

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
             + WN II + G+HG G++ L+L K+M A+G     VK + +TF++L +ACSHSG+V E
Sbjct: 517 TSVPWNAIISSLGIHGHGEKALQLFKDMRADG-----VKADHITFVSLLSACSHSGLVDE 571

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
               F  M+ +Y I+P+  HY C+VDL GRAG +E AY L++ MP + D A  W +LL A
Sbjct: 572 AQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQAD-ASIWGTLLAA 630

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CRIH N E+G  A+  L  ++ +   +YVLLSNIY++   W+ A+ VR   ++ G+RK P
Sbjct: 631 CRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTP 690

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G S +  G  +  F AG+ SH Q  +++  L  L+ +M+  GYVPD S VL +V E+EKE
Sbjct: 691 GWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKE 750

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            +L  HSE+LAI FGI++TPP + IR+ KNLRVC DCH ATK+ISKI  REII+RD  RF
Sbjct: 751 EILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRF 810

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSCGDYW
Sbjct: 811 HHFKDGICSCGDYW 824



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 278/552 (50%), Gaps = 37/552 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   + +  R  ++R+++    E+ + S ++PD + FP VLKA   + D   G+++H  
Sbjct: 116 SWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCW 172

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G+    V VA +L+++Y + G+ +   +KVF  +  +D  SWN+MI+  C+ G   
Sbjct: 173 VLKMGFE-HDVYVAASLIHLYSRFGA-VEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL     M    V+  + T+ S+   C+  +   G   G  VH   ++ G E + F+ N
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVG---GVLVHLYVIKHGLESDVFVSN 287

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY+K GR+ DA+ +F   E RDLVSWN+I+++  QND  + A+ F ++M   G++P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++ S+      L     G+ +H + +R   L  +  +G+ALV+MY     ++C R V
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  + +  WN +ITGY QN    EA+  +  MEE   + PN  T  S++PA     A
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IHG  IK  L  D +V   L+DMY + GR+E + ++F ++    +V WN +I+ 
Sbjct: 468 LQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISS 527

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
             I G    AL L ++M+        + V          K + IT +++L  C     + 
Sbjct: 528 LGIHGHGEKALQLFKDMR-------ADGV----------KADHITFVSLLSACSHSGLVD 570

Query: 522 KGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
           + +         Y I+  L         +VD++ + G L  A  +   MP++ +   W  
Sbjct: 571 EAQWCFDTMQKEYRIKPNLKH----YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGT 626

Query: 576 IIMAYGMHGEGQ 587
           ++ A  +HG  +
Sbjct: 627 LLAACRIHGNAE 638



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 6/270 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   SW   + +  +++    A+  + EM    ++PD     ++      + D  +
Sbjct: 308 GMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRI 367

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +H  VV+  +    + + N LVNMY K GS +     VF+++  +D +SWN++I   
Sbjct: 368 GRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGS-IDCARAVFEQLPSRDVISWNTLITGY 426

Query: 156 CRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
            + G    A++A+ MM     + P+  T VS+  A S++     L+ G ++HG  ++   
Sbjct: 427 AQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVG---ALQQGMKIHGRLIKNCL 483

Query: 215 W-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           + + F+   L+ MY K GR++DA +LF        V WN I+SSL  +    +A+   + 
Sbjct: 484 FLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKD 543

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           M   G+K D ++  S+L ACSH  ++D  +
Sbjct: 544 MRADGVKADHITFVSLLSACSHSGLVDEAQ 573


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 304/835 (36%), Positives = 474/835 (56%), Gaps = 42/835 (5%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D QPDN  F  VL + +   D++ G+ +H  +    +   ++ V N L++MYGKC S + 
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTM-VGNALISMYGKCDS-LV 59

Query: 132 DVYKVFDRI--TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           D   VF+ +   +++ VSWN+MIA   + G    AL  +  M    +     T VSV  A
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           CS+L++      GR++H      G  ++F  + NAL+ MYA+ G V DAK +F+S + RD
Sbjct: 120 CSSLAQ------GREIHNRVFYSG-LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
             SWN ++ + SQ+  +  A+   ++M    +KP+  +  +V+   S  E+L  G++IHA
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHA 231

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
             + N    D   V +AL++MY  C      R VFD +  + +  WN MI  Y QN    
Sbjct: 232 EIVANGFDSD-LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFH 290

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EAL L+ K+ ++ G      T  S++ AC   +A      +H H ++ GL  +  V  AL
Sbjct: 291 EALELYQKL-DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN- 486
           ++MY++ G +E ++ +F+ M+ RD V+W+T+I  Y   G   DA    +    +      
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409

Query: 487 ----------RNNVYDLDETVLRP-------KPNSITLMTVLPGCGALSALAKGKEIHAY 529
                     +N        + R        KP+++T + VL  C +L  L++ K +HA 
Sbjct: 410 CWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
              + L ++VVV + L++MYA+CG L  A R+F     + V++W  ++ A+  +G   E 
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L+L + M  EG     VKP++VT+ ++   C+H G + +G   F  M + +G+ P+ DH+
Sbjct: 530 LDLFQEMDLEG-----VKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHF 584

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           A +VDLLGR+G++ DA +L+  MP E D   AW + L ACRIH  +E+GE AA+ ++ L+
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPV-AWMTFLTACRIHGKLELGEAAAERVYELD 643

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
           P   + Y+ +SNIY++  +W+K   VRKKM+E G++K PG S+IE   ++H+F +G   H
Sbjct: 644 PSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYH 703

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT-P 828
            +++++   L  L   MR  GYVPDT  VLH+V+E EKET+L  HSEK+AIAFG++++  
Sbjct: 704 PRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRG 763

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF-KNGTCSCGDYW 882
            G  IRV KNLRVC+DCH ATKFI++I  R+IILRD  RFH F  +G CSCGDYW
Sbjct: 764 SGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 175/642 (27%), Positives = 303/642 (47%), Gaps = 75/642 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++    EA++ Y  M    +  D+  F +VL A +    L+ G++IH  V
Sbjct: 77  SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRV 133

Query: 104 VKYGYGLSSV-TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             +  GL S  ++AN LV MY + GS + D  ++F  +  +D+ SWN++I    + G W 
Sbjct: 134 --FYSGLDSFQSLANALVTMYARFGS-VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL  F+ M   +++P+S T ++V    S  S  + L  GR++H   +  G + +  +  
Sbjct: 191 GALRIFKEM-KCDMKPNSTTYINV---ISGFSTPEVLPEGRKIHAEIVANGFDSDLVVAT 246

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K G   +A+ +F   + RD+VSWN ++    QN  F EA+   +++ + G K 
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKR 306

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--------- 332
              +  S+L ACS ++ L  G+ +H++ L    L     V +ALV+MY  C         
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERG-LDSEVAVATALVNMYAKCGSLEEARKV 365

Query: 333 -------------------------REVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
                                    ++    R+VFD +  +    WNAMIT Y QN    
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAV 425

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            A+ +F +M   AGL P+A T  +V+ AC       + + +H    +  L  +  V N L
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           ++MY+R G +E ++ +F   + +  VSW  M+  ++  G++ +AL L +EM         
Sbjct: 486 INMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM--------- 536

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALV 546
               DL+      KP+ +T  ++L  C    +L +G +     A  + LA      +A+V
Sbjct: 537 ----DLEGV----KPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMV 588

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           D+  + G L  A+ + + MP   + + W   + A  +HG+    LEL +   A   R  E
Sbjct: 589 DLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK----LELGE---AAAERVYE 641

Query: 606 VKPNEVT-FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           + P+    +IA+    +  GM  +   +  KM ++ G++  P
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKM-EERGLKKLP 682


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 293/812 (36%), Positives = 458/812 (56%), Gaps = 43/812 (5%)

Query: 82   AVLKAVAGIQDLSLGKQIHAHVVKYG--YGLSSV-------TVANTLVNMYGKCGSDMWD 132
            +VL A AG+    +GK +H + VK G  +GL SV        + + LV MY KCG DM  
Sbjct: 310  SVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCG-DMAS 368

Query: 133  VYKVFDRITEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
              +VFD ++ K  V  WN ++    + G+++ +L  F  M    + P    +  +    +
Sbjct: 369  ARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCIT 428

Query: 192  NLS-RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
             LS  RDGL      HG  +++G      + NAL++ YAK   + DA  +F     +D +
Sbjct: 429  CLSCARDGL----VAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTI 484

Query: 250  SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
            SWN+++S  S N    EA+    +M  +G + D V++ SVLPAC+       G+ +H Y+
Sbjct: 485  SWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYS 544

Query: 310  LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
            ++   LI  + + +AL+DMY NC + +   ++F  +  K +  W AMIT Y +    ++ 
Sbjct: 545  VKTG-LIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKV 603

Query: 370  LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
              L  +M  + G+ P+   ++S + A    E+    + +HG+ I+ G+ +   V NALM+
Sbjct: 604  AGLLQEMV-LDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662

Query: 430  MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
            MY +   +E ++ IFD +  +D +SWNT+I GY+      ++  L  +M           
Sbjct: 663  MYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM----------- 711

Query: 490  VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                   +L+ +PN++T+  +LP   ++S+L +G+EIHAYA+R     D    +ALVDMY
Sbjct: 712  -------LLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMY 764

Query: 550  AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
             KCG L  AR +FD +  +N+I+W ++I  YGMHG G+  + L + M     RG  ++P+
Sbjct: 765  VKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM-----RGSGIEPD 819

Query: 610  EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
              +F A+  AC HSG+ +EG   F  M+ +Y IEP   HY C+VDLL R G +++A + I
Sbjct: 820  AASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFI 879

Query: 670  NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
              MP E D +  W SLL  CRIH+NV++ E  A  +F LEP+   +YVLL+NIY+ A+ W
Sbjct: 880  ESMPIEPDSS-IWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERW 938

Query: 730  DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
            +    ++ K+   G+R+  G SWIE   ++H F+A + +H    ++  FL++++ RMR+E
Sbjct: 939  EAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQE 998

Query: 790  GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
            G+ P     L   ++   +  LCGHS KLA+AFG+LN P G  IRV KN +VC+ CH+A 
Sbjct: 999  GHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAA 1058

Query: 850  KFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            KFISK+ +REIILRD  RFH F+ G CSC  Y
Sbjct: 1059 KFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 165/554 (29%), Positives = 275/554 (49%), Gaps = 40/554 (7%)

Query: 66  IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV---VKYGYGLSSVTVANTLVNM 122
           + +  SD   D  ++  V++     + L   K+ HA +        G     +   LV  
Sbjct: 86  LRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLA 145

Query: 123 YGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           Y KCG D+ +   VFD +  +  D   W S+++   + G +  A+  FR M    V P +
Sbjct: 146 YLKCG-DLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDA 204

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKT 238
              VS  L C  +S    L  G  +HG    L +G+    + NAL+A+Y++ GR++DA  
Sbjct: 205 HA-VSCVLKC--VSSLGSLTEGEVIHGLLEKLGLGQ-ACAVANALIAVYSRCGRMEDAAR 260

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F S   RD +SWN+++     N     AV    +M  +G +   V++ SVLPAC+ L  
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320

Query: 299 LDTGKEIHAYALRNDIL---------IDNSFVGSALVDMYCNCREVECGRRVFDFISDK- 348
              GK +H Y++++ +L         ID++ +GS LV MY  C ++   RRVFD +S K 
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            + +WN ++ GY +    EE+L LF++M E+ G+ P+   +S ++          D    
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHEL-GIAPDEHAISCLLKCITCLSCARDGLVA 439

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG+ +KLG G    V NAL+  Y++   I  +  +F+ M  +DT+SWN++I+G +  G +
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A+ L   M    +E        LD         S+TL++VLP C        G+ +H 
Sbjct: 500 SEAIELFIRMWTQGQE--------LD---------SVTLLSVLPACAQSRYWFAGRVVHG 542

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           Y+++  L  +  + +AL+DMY+ C       ++F  M  +NV++W  +I +Y   G   +
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602

Query: 589 VLELLKNMVAEGSR 602
           V  LL+ MV +G R
Sbjct: 603 VAGLLQEMVLDGIR 616



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 206/440 (46%), Gaps = 56/440 (12%)

Query: 275 ALRGIKPDG----VSIASVLPACSHLEMLDTGKEIHAYALRNDILI---DNSFVGSALVD 327
           ALR +  DG     S   V+  C     L+  K  HA    +         S +G  LV 
Sbjct: 85  ALRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVL 144

Query: 328 MYCNCREVECGRRVFDFISDKK--IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            Y  C ++   R VFD +  +   + +W ++++ Y +    +EA+ LF +M+   G+ P+
Sbjct: 145 AYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQ-CCGVSPD 203

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           A  +S V+       +  + E IHG   KLGLG+   V NAL+ +YSR GR+E +  +FD
Sbjct: 204 AHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFD 263

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            M  RD +SWN+MI G    G HG A+ L  +M +   E                  +S+
Sbjct: 264 SMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE-----------------ISSV 306

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNML----------ATDVVVGSALVDMYAKCGCL 555
           T+++VLP C  L     GK +H Y++++ L            D  +GS LV MY KCG +
Sbjct: 307 TVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDM 366

Query: 556 NFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
             ARRVFD M  + NV  WN+I+  Y   GE +E L L   M   G     + P+E    
Sbjct: 367 ASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELG-----IAPDEHAIS 421

Query: 615 ALFA-----ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            L       +C+  G+V+ G    Y +K  +G + +  +   ++    ++  + DA  + 
Sbjct: 422 CLLKCITCLSCARDGLVAHG----YIVKLGFGAQCAVCN--ALISFYAKSNMIGDAVLVF 475

Query: 670 NMMPPEFDKAGAWSSLLGAC 689
           N MP +     +W+S++  C
Sbjct: 476 NRMPRQ--DTISWNSVISGC 493



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 7/263 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + S  R+  F +      EM    I+PD FA  + L A AG + L  GK +H + 
Sbjct: 586 SWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYT 645

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G     + VAN L+ MY KC  ++ +   +FDR+T KD +SWN++I    R    + 
Sbjct: 646 IRNGME-KLLPVANALMEMYVKC-RNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNE 703

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNA 222
           +   F  ML     P++ T+  +  A +++S    L  GR++H  +LR G   +++  NA
Sbjct: 704 SFSLFSDMLL-QFRPNAVTMTCILPAAASIS---SLERGREIHAYALRRGFLEDSYASNA 759

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G +  A+ LF     ++L+SW  +++    +     A+    QM   GI+PD
Sbjct: 760 LVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPD 819

Query: 283 GVSIASVLPACSHLEMLDTGKEI 305
             S +++L AC H  +   G+  
Sbjct: 820 AASFSAILYACCHSGLAAEGRRF 842


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 300/824 (36%), Positives = 467/824 (56%), Gaps = 38/824 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY----GLSSVTVANTLVNMY 123
           M   +IQ +  A  A+L A + ++ L  GK++H  V++             + N ++ MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 124 GKCG-SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
            +CG +D+     VFDR+ +++ V+W S+I+     G +  A+  FR ML S V P   T
Sbjct: 61  LRCGCTDL--ALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRIT 118

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
             S+ L  S   R   L  G++VH + ++ G E +  +MN ++ MY K G V+ A  +F 
Sbjct: 119 FTSILLKWSG--RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFD 176

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           S +D ++ SW  I+++ +QN   +E +  L +M   G+KPDG +  +VL AC+ +  L+ 
Sbjct: 177 SIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEE 236

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
            K +HA  + +  L  ++ VG+AL+++Y  C  +E    VF  I +K I  W++MI  + 
Sbjct: 237 AKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFA 296

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           Q+   + A+ L + M+ + G+ PN  T  +V+ A    +AF   + IH   ++ G   D 
Sbjct: 297 QSGQAKSAIQLLMLMD-LEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + +AL+ MY   G +E +++IF+    RD VSW++MI GY+       AL L REM+  
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME-- 413

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                          V   +PNS+T ++ +  C  + AL +G ++H       L  DV V
Sbjct: 414 ---------------VDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPV 458

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +ALV++Y KCG L  A  VF  M  +N++TW  I MAYG +G G   L+LL  M  +G 
Sbjct: 459 ATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQG- 517

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               +KP+ + F+A+  +C+++G +S+G+  +  M  D+GI P+ +H  C+VD+LGRAGK
Sbjct: 518 ----MKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGK 573

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +E A QLIN M  +F+ + AW  LL AC+ H +      AA+ +F LEP  A+ YVLLS+
Sbjct: 574 LEAAEQLINTM--KFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSS 631

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG--SHQQSEQLHGFL 779
           ++ +A  W+ A + R++M   GV++  G S IE GD +H+F+A      H    ++   L
Sbjct: 632 VFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAAL 691

Query: 780 ENLSERMRKEGYVPDTSCV-LHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           E L   M+  GYVPD + V L +V E  KE  +  HSE LA+  GI++TP GT +R+ KN
Sbjct: 692 EKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKN 751

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LR+C+DCH ATKF+SK+  R I +RD RR HHF+NG CSCGDYW
Sbjct: 752 LRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 278/551 (50%), Gaps = 38/551 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ-DLSLGKQIHAH 102
           +W   + +   +  F +A++ + +M  S + PD   F ++L   +G + +L  GK++H+H
Sbjct: 83  AWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSH 142

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +++ GY      V N +V MYGKCG D+     VFD I + +  SW  +IA   + G   
Sbjct: 143 IMQTGYE-GDRMVMNLVVEMYGKCG-DVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCM 200

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIM 220
             L     M  + V+P  +T  +V  AC+ +     L   + +H  ++     + +  + 
Sbjct: 201 EVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG---ALEEAKILHAATISSTGLDRDAAVG 257

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+ +Y K G +++A  +F   +++D+VSW++++++ +Q+ +   A+  L  M L G++
Sbjct: 258 TALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVR 317

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ V+  +VL A + L+    GKEIHA  ++     D+  + SALV MYCN   VE  R 
Sbjct: 318 PNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAG-YSDDVCLTSALVKMYCNWGWVETARS 376

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F+   ++ +  W++MI GY QNE    AL LF +M EV G+ PN+ T  S + AC    
Sbjct: 377 IFESSRERDVVSWSSMIAGYSQNESPARALSLFREM-EVDGVQPNSVTFVSAIDACAGVG 435

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A      +H     LGL +D  V  AL+++Y + GR+E ++ +F  M+ ++ ++W ++  
Sbjct: 436 ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y   GQ+G     L+ +  ME +                KP+ I  + +L  C     +
Sbjct: 496 AY---GQNGHGSRSLKLLHGMELQG--------------MKPDGIVFVAILVSCNYAGQM 538

Query: 521 AKGKEIHAYAIRNMLATDVVVGSA------LVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
           +KG  +H Y   N++  D  +  A      +VD+  + G L  A ++ + M   + + W 
Sbjct: 539 SKG--LHYY---NLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWM 593

Query: 575 VIIMAYGMHGE 585
           +++ A   H +
Sbjct: 594 MLLTACKAHND 604



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 228/449 (50%), Gaps = 15/449 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++    E +     M ++ ++PD + F  VL A   +  L   K +HA  
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAAT 244

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +          V   L+N+YGKCG+ + + + VF +I  KD VSW+SMIA   + G+   
Sbjct: 245 ISSTGLDRDAAVGTALINLYGKCGA-LEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKS 303

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A++   +M    V P++ T V+V  A ++L      + G+++H   ++ G  +   + +A
Sbjct: 304 AIQLLMLMDLEGVRPNNVTFVNVLEAVTSLK---AFQYGKEIHARIVQAGYSDDVCLTSA 360

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY   G V+ A+++F+S  +RD+VSW+++++  SQN+    A+   R+M + G++P+
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPN 420

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  S + AC+ +  L  G ++H   +R   L  +  V +ALV++Y  C  +E    VF
Sbjct: 421 SVTFVSAIDACAGVGALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF 479

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  K +  W ++   YGQN +   +L L   M E+ G+ P+     +++ +C  + A 
Sbjct: 480 LGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGM-ELQGMKPDGIVFVAILVSC--NYAG 536

Query: 403 PDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
              +G+H + +     G+         ++D+  R G++E ++ + + M+   +++W  ++
Sbjct: 537 QMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLL 596

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRN 488
           T    C  H D     R  + + + + +N
Sbjct: 597 TA---CKAHNDTARAARAAEKIFQLEPKN 622



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 41  CKESWIESLRSEARSNQFRE-------------------AILSYIEMTRSDIQPDNFAFP 81
           C   W+E+ RS   S++ R+                   A+  + EM    +QP++  F 
Sbjct: 366 CNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFV 425

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           + + A AG+  L  G Q+H  V   G     V VA  LVN+YGKCG  + +   VF  + 
Sbjct: 426 SAIDACAGVGALRRGTQLHERVRCLGLD-KDVPVATALVNLYGKCGR-LEEAEAVFLGMK 483

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           +K+ ++W S+     + G    +L+    M    ++P     V++ ++C+
Sbjct: 484 KKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCN 533


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 295/744 (39%), Positives = 445/744 (59%), Gaps = 41/744 (5%)

Query: 146 VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQV 205
           +S N +++     G++   L+ F  M+ S++E    T +   L  +   R D L LG+QV
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFI---LVLATAVRLDSLALGQQV 344

Query: 206 HGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           H  +L++G +    + N+L+ MY KL ++  A+T+F +  +RDL+SWN++++ ++Q+D  
Sbjct: 345 HCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLE 404

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGS 323
           +EAV    Q+   G+KPD  ++ SVL A S L E L   K+IH +A++ + + D SFV +
Sbjct: 405 VEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD-SFVST 463

Query: 324 ALVDMYCNCR-----EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           AL+D Y   R     EV  GR  FD ++      WNAM++GY Q+    + L LF  M +
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNFDLVA------WNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G   +  T+++V+  C    A    + +H +AIK G   D +V + ++DMY + G + 
Sbjct: 518 -QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 576

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++  FD + V D V+W T+I+G    G+   AL +  +M+ M               VL
Sbjct: 577 AAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLM--------------GVL 622

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              P+  T+ T+      L+AL +G++IHA A++    +D  VG++LVDMYAKCG ++ A
Sbjct: 623 ---PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDA 679

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             +F  + + N+  WN +++    HGEG+E L+L K M + G     +KP++VTFI + +
Sbjct: 680 YCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLG-----IKPDKVTFIGVLS 734

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           ACSHSG+VSE       M  DYGI+P  +HY+C+ D LGRAG V++A  LI+ M  E   
Sbjct: 735 ACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSME-AS 793

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
           A  + +LL ACR+  + E G+  A  L  LEP  +S YVLLSN+Y++A  WD+    R  
Sbjct: 794 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 853

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
           MK   V+K+PG SWIE  ++IH F+  D S+ Q+E ++  ++++   +++EGYVP+T   
Sbjct: 854 MKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFT 913

Query: 799 LHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESR 858
           L +V EEEKE  L  HSEKLA+AFG+L+TPP T IRV KNLRVC DCH A K+ISK+  R
Sbjct: 914 LVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDR 973

Query: 859 EIILRDVRRFHHFKNGTCSCGDYW 882
           EI+LRD  RFH FK+G CSCGDYW
Sbjct: 974 EIVLRDANRFHRFKDGICSCGDYW 997



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 294/580 (50%), Gaps = 58/580 (10%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           + Q+   +  +++M  SD++ D   F  VL     +  L+LG+Q+H   +K G  L  +T
Sbjct: 300 AGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLM-LT 358

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA---FRMM 171
           V+N+L+NMY K    +     VF+ ++E+D +SWNS+IA +    + DL +EA   F  +
Sbjct: 359 VSNSLINMYCKL-RKIGLARTVFNNMSERDLISWNSVIAGI---AQSDLEVEAVCLFMQL 414

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKL 230
           L   ++P  +T+ SV  A S+L   +GL L +Q+H ++++     ++F+  AL+  Y++ 
Sbjct: 415 LRCGLKPDHYTMTSVLKAASSLP--EGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRN 472

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
             + +A+ LF    + DLV+WN ++S  +Q+    + +     M  +G + D  ++A+VL
Sbjct: 473 RCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVL 531

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
             C  L  ++ GK++HAYA+++   +D  +V S ++DMY  C ++   +  FD I     
Sbjct: 532 KTCGFLFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 590

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W  +I+G  +N  +E AL +F +M  + G+ P+  T++++  A     A      IH 
Sbjct: 591 VAWTTLISGCIENGEEERALHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 649

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +A+KL    D +V  +L+DMY++ G I+ +  +F  +E+ +  +WN M+ G    G+  +
Sbjct: 650 NALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 709

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L ++M++                 L  KP+ +T + VL  C     ++   E + Y 
Sbjct: 710 ALQLFKQMES-----------------LGIKPDKVTFIGVLSACSHSGLVS---EAYKY- 748

Query: 531 IRNM-----LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
           IR+M     +  ++   S L D   + G +  A  + D M +  +   +  ++ A  + G
Sbjct: 749 IRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQG 808

Query: 585 EGQ-------EVLE----------LLKNMVAEGSRGGEVK 607
           + +       ++LE          LL NM A  S+  E+K
Sbjct: 809 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMK 848



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 218/434 (50%), Gaps = 21/434 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAH 102
           SW   +   A+S+   EA+  ++++ R  ++PD++   +VLKA + + + LSL KQIH H
Sbjct: 390 SWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVH 449

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K    ++   V+  L++ Y +    M +   +F R    D V+WN+M++   +     
Sbjct: 450 AIKTN-NVADSFVSTALIDAYSR-NRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGH 506

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             LE F +M         FTL +V   C  L     +  G+QVH  +++ G + + ++ +
Sbjct: 507 KTLELFALMHKQGERSDDFTLATVLKTCGFLF---AINQGKQVHAYAIKSGYDLDLWVSS 563

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MY K G +  A+  F S    D V+W T++S   +N +   A+    QM L G+ P
Sbjct: 564 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLP 623

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  +IA++  A S L  L+ G++IHA AL+ +   D  FVG++LVDMY  C  ++    +
Sbjct: 624 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTSD-PFVGTSLVDMYAKCGSIDDAYCL 682

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----V 397
           F  I    I  WNAM+ G  Q+   +EAL LF +ME + G+ P+  T   V+ AC    +
Sbjct: 683 FKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESL-GIKPDKVTFIGVLSACSHSGL 741

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
            SEA+     +H      G+  +    + L D   R G ++ ++ + D M +  + S + 
Sbjct: 742 VSEAYKYIRSMHR---DYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYR 798

Query: 457 TMITGYTICGQHGD 470
           T++     C   GD
Sbjct: 799 TLLAA---CRVQGD 809



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 153/621 (24%), Positives = 272/621 (43%), Gaps = 88/621 (14%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L+      DL LGK  HA ++          V N L++MY KCGS  +   +VFD++ E+
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLV-NNLISMYSKCGSLTY-ARRVFDKMPER 110

Query: 144 DQVSWNSMIATLCRFGKWDL-----ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           D VSWNS++A   +  +  +     A   FR++    V  S  TL  +   C +      
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY--- 167

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           +      HG + ++G + + F+  AL+ +Y K G+V + + LF+    RD+V WN ++ +
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +     EA+         G+ P+ +++                       L + I  D
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITL----------------------RLLSRISGD 265

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           +S  G          +  E G    D  +  +I   N +++GY         L  F+ M 
Sbjct: 266 DSEAGQV--------KSFENGN---DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E + L  +  T   V+   VR ++    + +H  A+KLGL     V N+L++MY ++ +I
Sbjct: 315 E-SDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKI 373

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            +++T+F++M  RD +SWN++I G        +A+ L  ++                   
Sbjct: 374 GLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQL------------------- 414

Query: 498 LR--PKPNSITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           LR   KP+  T+ +VL    +L   L+  K+IH +AI+     D  V +AL+D Y++  C
Sbjct: 415 LRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRC 474

Query: 555 LN-----FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +      F R  FDL      + WN ++  Y    +G + LEL   M  +G R      +
Sbjct: 475 MKEAEVLFGRNNFDL------VAWNAMMSGYTQSHDGHKTLELFALMHKQGERS-----D 523

Query: 610 EVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           + T   +   C     +++G  +  Y +K  Y ++      + ++D+  + G +  A   
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFA 581

Query: 669 INMMPPEFDKAGAWSSLLGAC 689
            + +P   D   AW++L+  C
Sbjct: 582 FDSIPVPDDV--AWTTLISGC 600



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 7/162 (4%)

Query: 31  SLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI 90
           S+P+P        +W   +     + +   A+  + +M    + PD F    + KA + +
Sbjct: 584 SIPVPDDV-----AWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
             L  G+QIHA+ +K     S   V  +LV+MY KCGS + D Y +F RI   +  +WN+
Sbjct: 639 TALEQGRQIHANALKLN-CTSDPFVGTSLVDMYAKCGS-IDDAYCLFKRIEMMNITAWNA 696

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           M+  L + G+   AL+ F+ M    ++P   T + V  ACS+
Sbjct: 697 MLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH 738


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 306/863 (35%), Positives = 472/863 (54%), Gaps = 53/863 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + +R   F +A   + +M    +QP+ F+  ++LK      ++ L +Q+H   
Sbjct: 88  SWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWS 147

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKW 161
           ++ G+GL S  +    + MY +CG  + D  +VFD  +    D + WNS+IA     G W
Sbjct: 148 IRTGFGLDS-GIRAAWITMYSRCGV-LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCW 205

Query: 162 DLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM 220
              L  F +M+    V P+  T  SV  AC +       + G  VHG  ++ G   T + 
Sbjct: 206 VEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEE---KYGAMVHGRIIKAGLEATNLW 262

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRG 278
           N+L+  Y K G +  A  LF+    +D+VSWN ++++  Q  +   A+   R+M      
Sbjct: 263 NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPP 322

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+ V+  S+L A S L  L  G+EIHA+  R  + +D S   S L+  Y  CREV   
Sbjct: 323 VQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNS-LITFYSKCREVGKA 381

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +F+ +  + I  WN+M+ GY QNE       +F +M  ++G+ P++ +++ +  A  R
Sbjct: 382 REIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMM-LSGIEPDSHSLTIIFNAASR 440

Query: 399 SEA----FPDKEGIHGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
             +    F   + IHG+ ++     G    V NA++ MY++  RI  ++ IF  M+ RD+
Sbjct: 441 DSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDS 500

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
            SWN M+ GY+   +  D LM+  ++            + LD          ++L  +L 
Sbjct: 501 YSWNAMMDGYSRNAKFEDVLMIFLDILKQG--------FPLDH---------VSLSILLT 543

Query: 513 GCGALSALAKGKEIHAYAIRNMLATD-------VVVGSALVDMYAKCGCLNFARRVFDLM 565
            CG L +L  GK+ HA   +     D       + + +AL+ MY+KCG +  A +VF  M
Sbjct: 544 SCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKM 603

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             ++V +W  +I     HG   E L+L + M  +G     +KPN+VTF+AL  AC+H G+
Sbjct: 604 ERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG-----IKPNQVTFLALLMACAHGGL 658

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM-----MPPEFDKAG 680
           V EG   F  M +DYG+ PS +HYAC++DL GR+G+ + A  L+        P   D   
Sbjct: 659 VQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILN 718

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W  LLGAC   + +++G  AA  +  LEP+  + Y+LL+N+Y+S+ LW+ A+ VRK M+
Sbjct: 719 LWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMR 778

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           + G+RKE GCSWI+ G+  H F+AGD  H Q ++++  L  L+   R+ GYVP T  VLH
Sbjct: 779 DKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLH 838

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGT-TIRVAKNLRVCNDCHQATKFISKIESRE 859
           +V+E EKE +L  HSEKLA++FG+LN   G   IRV KNLRVC DCH   KF S +E RE
Sbjct: 839 DVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKRE 898

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I+LRD +RFH F++G+CSCGDYW
Sbjct: 899 ILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 209/412 (50%), Gaps = 27/412 (6%)

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
           R+  A+ LF +F +RD++SW+ ++++ S+   F +A    ++M   G++P+G S+AS+L 
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS--DKK 349
                  +   +++H +++R    +D S + +A + MY  C  +E  +RVFD  S     
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLD-SGIRAAWITMYSRCGVLEDAQRVFDETSLLALD 188

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           I LWN++I  Y  +    E L LF KM  V  + P   T +SVV AC  S        +H
Sbjct: 189 ILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVH 248

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G  IK GL     + N+L+  Y + G ++ +  +F+ +  +D VSWN MI      G+  
Sbjct: 249 GRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL L R M  +E                  +PN +T +++L     LSAL  G+EIHA+
Sbjct: 308 NALGLFRRMLKVEPP---------------VQPNRVTFLSLLSAVSGLSALRCGREIHAH 352

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
             R  L  D  + ++L+  Y+KC  +  AR +F+ + +R++I+WN ++  Y  + +    
Sbjct: 353 IFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRC 412

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            ++ K M+  G     ++P+  +   +F A S     S G+  F + K+ +G
Sbjct: 413 FDIFKRMMLSG-----IEPDSHSLTIIFNAASRD---SSGLIYFRRGKEIHG 456



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 272/574 (47%), Gaps = 44/574 (7%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS-VALACSNL 193
           ++FD    +D +SW+++IA   R G +  A   F+ M+   ++P+ F+L S + ++CS  
Sbjct: 76  QLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCST- 134

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF--KSFEDRDLVS 250
                + L RQ+HG S+R G   ++ I  A + MY++ G ++DA+ +F   S    D++ 
Sbjct: 135 ---GEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILL 191

Query: 251 WNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           WN+I+++   +  ++E + +F + +++  + P  ++ ASV+ AC        G  +H   
Sbjct: 192 WNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRI 251

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           ++  +   N  + ++LV  Y  C  ++   ++F+ IS K +  WNAMI    Q    E A
Sbjct: 252 IKAGLEATN--LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENA 309

Query: 370 LMLFIKMEEV-AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           L LF +M +V   + PN  T  S++ A     A      IH H  +L L  D  + N+L+
Sbjct: 310 LGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLI 369

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
             YS+   +  ++ IF+ + +RD +SWN+M+ GY    Q G    + + M          
Sbjct: 370 TFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMM--------- 420

Query: 489 NVYDLDETVLRPKPNSITLM--TVLPGCGALSALAKGKEIHAYAIRNML--ATDVVVGSA 544
                  + + P  +S+T++          L    +GKEIH Y +R +      + V +A
Sbjct: 421 ------LSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNA 474

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           ++ MYAK   +  A ++F  M  R+  +WN ++  Y  + + ++VL +  +++ +G    
Sbjct: 475 ILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQG---- 530

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA------CVVDLLGR 658
               + V+   L  +C     +  G      +   +  +  P   +       ++ +  +
Sbjct: 531 -FPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSK 589

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            G ++DA Q+   M  E     +W++++  C  H
Sbjct: 590 CGSIKDAAQVFLKM--ERKDVFSWTAMITGCAHH 621



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 29/244 (11%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
             G + R   SW   +   +R+ +F + ++ ++++ +     D+ +   +L +   +  L
Sbjct: 492 FKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSL 551

Query: 94  SLGKQIHAHVVKYGYGL------SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS 147
            LGKQ HA V K   G       S +++ N L++MY KCGS + D  +VF ++  KD  S
Sbjct: 552 QLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGS-IKDAAQVFLKMERKDVFS 610

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           W +MI      G    AL+ F  M    ++P+  T +++ +AC++     GL      + 
Sbjct: 611 WTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAH----GGLVQEGSYYF 666

Query: 208 NSLRVGEWNTFIMN-------ALMAMYAKLGRVDDAK-------TLFKSFEDRDLVSWNT 253
           +S+    +N + ++        ++ ++ + G+ D AK       TLFK + D  L  W  
Sbjct: 667 DSM----YNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKV 722

Query: 254 IVSS 257
           ++ +
Sbjct: 723 LLGA 726


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 308/855 (36%), Positives = 483/855 (56%), Gaps = 48/855 (5%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  R +ES+I  L   +R  + +EA   ++ + R  ++ D   F +VLK  A + D   G
Sbjct: 53  SPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG 112

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+H   +K+G+ L  V+V  +LV+ Y K GS+  D  KVFD + E++ V+W ++I+   
Sbjct: 113 RQLHCQCIKFGF-LDDVSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYA 170

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           R    D  L  F  M     +P+SFT    A A   L+       G QVH   ++ G   
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTF---AAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227

Query: 217 TF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           T  + N+L+ +Y K G V  A+ LF   E + +V+WN+++S  + N   LEA+     M 
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           L  ++    S ASV+  C++L+ L   +++H   ++   L D + + +AL+  Y  C  +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-IRTALMVAYSKCTAM 346

Query: 336 ECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS---S 391
               R+F  I     +  W AMI+G+ QN+  EEA+ LF +M+   G+ PN  T S   +
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYSVILT 405

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
            +P    SE       +H   +K    R   V  AL+D Y ++G++E +  +F  ++ +D
Sbjct: 406 ALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+W+ M+ GY   G+   A+ +  E+                 T    KPN  T  ++L
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGEL-----------------TKGGIKPNEFTFSSIL 501

Query: 512 PGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
             C A +A + +GK+ H +AI++ L + + V SAL+ MYAK G +  A  VF     +++
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++WN +I  Y  HG+  + L++ K M     +  +VK + VTFI +FAAC+H+G+V EG 
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEM-----KKRKVKMDGVTFIGVFAACTHAGLVEEGE 616

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGA 688
             F  M  D  I P+ +H +C+VDL  RAG++E A ++I  MP   + AG+  W ++L A
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP---NPAGSTIWRTILAA 673

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR+H+  E+G +AA+ +  ++P+ ++ YVLLSN+Y+ +  W +   VRK M E  V+KEP
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE  ++ + FLAGD SH   +Q++  LE+LS R++  GY PDTS VL ++++E KE
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKE 793

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            +L  HSE+LAIAFG++ TP G+ + + KNLRVC DCH   K I+KIE REI++RD  RF
Sbjct: 794 AVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRF 853

Query: 869 HHF-KNGTCSCGDYW 882
           HHF  +G CSCGD+W
Sbjct: 854 HHFSSDGVCSCGDFW 868


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/693 (38%), Positives = 427/693 (61%), Gaps = 40/693 (5%)

Query: 199 LRLGRQVHGN--SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            + G+Q+H +  S  + E NT++   L A YA  G +  A+ +F     ++   WN ++ 
Sbjct: 75  FKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIR 134

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRN 312
             + N   +++++  R+M   G + D  +   VL AC  L +++ G+ +H+      L +
Sbjct: 135 GYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLES 194

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
           DI     +VG++L+ MY    ++   R VFD ++++ +  WN MI+GY +N     A ++
Sbjct: 195 DI-----YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLV 249

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR-DRYVQNALMDMY 431
           F  M + AGL+ + TT+  ++ AC   +A  + + IHG+A++  +G  +++  N+L++MY
Sbjct: 250 FDLMGK-AGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
                +  ++ +F+ +  +DTVSWN+MI GY    ++GDA   LR  + M          
Sbjct: 309 CNCNCMVDARRLFERVRWKDTVSWNSMILGY---ARNGDAFESLRLFRRMA--------- 356

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            LD +     P+ +T + VL  C  ++AL  G  IH+Y ++     + +VG+ALVDMY+K
Sbjct: 357 -LDGS----GPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSK 411

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L  +RRVFD MP +++++W+ ++  YG+HG G+E + +L     +G +   V P+  
Sbjct: 412 CGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL-----DGMKANSVIPDNG 466

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
            F ++ +ACSH+G+V EG ++FYKM+ +Y ++P+  HY+C+VDLLGRAG +++AY +I  
Sbjct: 467 VFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRT 526

Query: 672 M--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           M   P  D    W++LL A R+H+N+++ EI+AQ +F + P V S Y+ LSNIY++ + W
Sbjct: 527 MEIKPTSD---IWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRW 583

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           D    VR  ++  G++K PGCS+IE  + +H+FL GD SHQQ+E ++  L  L +++++ 
Sbjct: 584 DDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEA 643

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GY PDTS V ++V EE KE +L  HSE+LAIAF ++NT PGT IR+ KNLRVC DCH  T
Sbjct: 644 GYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVT 703

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K IS++  REII+RD+ RFHHF  G CSCGDYW
Sbjct: 704 KLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 252/511 (49%), Gaps = 37/511 (7%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           A+L++    +    G+Q+HAH++ +    ++  +   L   Y  CG  M     +FD I 
Sbjct: 64  ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGL-MSQAEVIFDGIV 122

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            K+   WN MI      G    +L  +R ML       +FT   V  AC +L     + +
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLL---VEI 179

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR+VH   +  G E + ++ N+L+AMYAK G +  A+ +F    +RDL SWNT++S  ++
Sbjct: 180 GRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAK 239

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N     A +    M   G+  D  ++  +L AC+ L+ +  GK IH YA+RN I   N F
Sbjct: 240 NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
             ++L++MYCNC  +   RR+F+ +  K    WN+MI GY +N    E+L LF +M  + 
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRM-ALD 358

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G  P+  T  +V+ AC +  A      IH + +K G   +  V  AL+DMYS+ G +  S
Sbjct: 359 GSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACS 418

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD+M  +  VSW+ M+ GY + G+  +A+ +L  M+        N+V          
Sbjct: 419 RRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMK-------ANSVI--------- 462

Query: 501 KPNSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCL 555
            P++    ++L  C     + +GKEI       Y ++  L+      S +VD+  + G L
Sbjct: 463 -PDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHY----SCMVDLLGRAGHL 517

Query: 556 NFAR---RVFDLMPVRNVITWNVIIMAYGMH 583
           + A    R  ++ P  ++  W  ++ A  +H
Sbjct: 518 DEAYVIIRTMEIKPTSDI--WAALLTASRLH 546



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 221/426 (51%), Gaps = 21/426 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +    ++++ Y EM     + DNF +P VLKA   +  + +G+++H+ VV
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G   S + V N+L+ MY K G DM     VFDR+ E+D  SWN+MI+   +      A
Sbjct: 189 VCGLE-SDIYVGNSLLAMYAKFG-DMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTA 246

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNA 222
              F +M  + +     TL+ +  AC++L     ++ G+ +HG ++R  +G +N F  N+
Sbjct: 247 FLVFDLMGKAGLFADCTTLLGLLSACADLK---AVKEGKVIHGYAVRNSIGNYNKFFTNS 303

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY     + DA+ LF+    +D VSWN+++   ++N    E++   R+MAL G  PD
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  +VL AC  +  L  G  IH+Y ++      N+ VG+ALVDMY  C  + C RRVF
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKG-FDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D + DK +  W+AM+ GYG +    EA+ +   M +   + P+    +S++ AC  +   
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM-KANSVIPDNGVFTSILSACSHAGLV 481

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNAL------MDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
                + G  I   + ++  V+ AL      +D+  R G ++ +  I   ME++ T   W
Sbjct: 482 -----VEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIW 536

Query: 456 NTMITG 461
             ++T 
Sbjct: 537 AALLTA 542



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 220/447 (49%), Gaps = 33/447 (7%)

Query: 251 WNTIVSSLSQND--KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +N+  S  SQ D  + +E  + +R+  L+      +   ++L + ++ +    G+++HA+
Sbjct: 25  YNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAH 84

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            +   IL +N+++ + L   Y  C  +     +FD I  K   LWN MI GY  N    +
Sbjct: 85  MISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMK 144

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           +L+L+ +M    G   +  T   V+ AC           +H   +  GL  D YV N+L+
Sbjct: 145 SLVLYREM-LCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLL 203

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MY++ G +  ++ +FD M  RD  SWNTMI+GY      G A ++   M        + 
Sbjct: 204 AMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLM-------GKA 256

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT-DVVVGSALVD 547
            ++           +  TL+ +L  C  L A+ +GK IH YA+RN +   +    ++L++
Sbjct: 257 GLF----------ADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIE 306

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY  C C+  ARR+F+ +  ++ ++WN +I+ Y  +G+  E L L + M  +GS      
Sbjct: 307 MYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGS-----G 361

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           P++VTFIA+  AC     +  GM +  Y +K   G + +      +VD+  + G +  + 
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKK--GFDANTIVGTALVDMYSKCGSLACSR 419

Query: 667 QLINMMPPEFDKA-GAWSSLLGACRIH 692
           ++ + MP   DK+  +WS+++    +H
Sbjct: 420 RVFDEMP---DKSLVSWSAMVAGYGLH 443



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 5/263 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++     A L +  M ++ +  D      +L A A ++ +  GK IH + 
Sbjct: 229 SWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYA 288

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+   G  +    N+L+ MY  C   M D  ++F+R+  KD VSWNSMI    R G    
Sbjct: 289 VRNSIGNYNKFFTNSLIEMYCNCNC-MVDARRLFERVRWKDTVSWNSMILGYARNGDAFE 347

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +L  FR M      P   T ++V  AC  ++    LR G  +H   ++ G + NT +  A
Sbjct: 348 SLRLFRRMALDGSGPDQVTFIAVLGACDQIA---ALRYGMSIHSYLVKKGFDANTIVGTA 404

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K G +  ++ +F    D+ LVSW+ +V+    + +  EA+  L  M    + PD
Sbjct: 405 LVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPD 464

Query: 283 GVSIASVLPACSHLEMLDTGKEI 305
                S+L ACSH  ++  GKEI
Sbjct: 465 NGVFTSILSACSHAGLVVEGKEI 487


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 310/845 (36%), Positives = 461/845 (54%), Gaps = 49/845 (5%)

Query: 44  SW---IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           SW   I+ L +E  +N   ++I  + EM    I P+ F     LKA +    L LGKQ+H
Sbjct: 180 SWTALIQGLVAEGFAN---DSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           A   K G  L  + V + LV++Y KCG ++    K+F  + E++ V+WN ++    + G 
Sbjct: 237 AQAFKLGL-LLDLFVGSALVDLYAKCG-EIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
               L+ F  M+  +V+ + FTL +V   C+N      L+ G+ +H   ++ G E N FI
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN---SKNLKQGQVIHSLIIKCGYEGNEFI 351

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
              L+ MY+K G   DA  +FK+ +  D+V W+ +++ L Q  +  E++     M L   
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREV 335
            P+  +I S+L A ++   L  G+ IHA    Y    D+ + N     ALV MY     V
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSN-----ALVTMYMKNGCV 466

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
             G ++++ + D+ +  WNA ++G       +  L +F  M E  G  PN  T  S++ +
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE-EGFIPNMYTFISILGS 525

Query: 396 CVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           C  S  F    G  +H H IK  L  + +V  AL+DMY++   +E +   F+ + VRD  
Sbjct: 526 C--SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLF 583

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +W  +IT Y    Q   AL   R+MQ               E V   KPN  TL   L G
Sbjct: 584 TWTVIITNYAQTNQGEKALNYFRQMQQ--------------EGV---KPNEFTLAGCLSG 626

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C +L++L  G+++H+   ++   +D+ VGSALVDMYAKCGC+  A  +F+ +  R+ I W
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAW 686

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N II  Y  +G+G + L   + M+ EG     + P+ VTF  + +ACSH G+V EG + F
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEG-----ISPDGVTFTGILSACSHQGLVEEGKEHF 741

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             M  D+GI P+ DH AC+VD+LGR GK ++    I  M      A  W ++LGA ++H 
Sbjct: 742 NSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS-QNALIWETVLGASKMHN 800

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N+ +GE AA  LF L+P+  S Y+LLSNI+++   WD    VR  M   GV+KEPGCSW+
Sbjct: 801 NLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWV 860

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E   ++H F++ D SH Q +++H  L+ L   +    YVP T  VLHNV E EK+  L  
Sbjct: 861 EANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRF 920

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSE+LA+ F +++T     IR+ KNLR+C DCH   K IS I ++EI++RDVRRFHHFKN
Sbjct: 921 HSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKN 980

Query: 874 GTCSC 878
           G CSC
Sbjct: 981 GACSC 985



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 177/647 (27%), Positives = 302/647 (46%), Gaps = 35/647 (5%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + ++L+  A  + L + K IH  +VK      S  +  +LVN+Y KC    +    V  +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDS-HLWVSLVNVYAKCRYSAY-ARLVLAK 172

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + ++D VSW ++I  L   G  + ++  F+ M    + P+ FTL +   ACS     D  
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD-- 230

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            LG+Q+H  + ++G   + F+ +AL+ +YAK G ++ A  +F    +++ V+WN +++  
Sbjct: 231 -LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q       +     M    +K +  ++ +VL  C++ + L  G+ IH+  ++      N
Sbjct: 290 AQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE-GN 348

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F+G  LVDMY  C        VF  I    I +W+A+IT   Q    EE++ LF  M  
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLM-R 407

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +    PN  T+ S++ A   +      + IH    K G   D  V NAL+ MY + G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
               +++ M  RD +SWN  ++G   CG +   L +   M              L+E  +
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHM--------------LEEGFI 513

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              PN  T +++L  C  L  +  G+++HA+ I+N L  +  V +AL+DMYAKC  L  A
Sbjct: 514 ---PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
              F+ + VR++ TW VII  Y    +G++ L   + M  EG     VKPNE T     +
Sbjct: 571 DVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-----VKPNEFTLAGCLS 625

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            CS    +  G  L + M    G        + +VD+  + G +E+A  L   +      
Sbjct: 626 GCSSLASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR--D 682

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             AW++++  C   QN +  +       +L+  ++   V  + I S+
Sbjct: 683 TIAWNTII--CGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 296/871 (33%), Positives = 479/871 (54%), Gaps = 39/871 (4%)

Query: 18  SLQTHQPPATTATSLPLPG---SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ 74
           +LQTH+        + + G   S +   ++    LR         +A+     M    I+
Sbjct: 35  NLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLESMLELRIE 94

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
            +  A+ A+L+     +    G +++  +V        V + N L++M+ + G ++ D +
Sbjct: 95  VEEDAYIALLRLCEWRRAPDEGSRVY-ELVSSSKSCLCVRLGNALLSMFVRFG-NLLDAW 152

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            VF +++E+D  SWN ++    + G +D AL  +  ML++ + P+ +T  SV   C+ +S
Sbjct: 153 YVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               +  G+++H + +R G E +  + NAL+ MY K G + +A+ LF     RD +SWN 
Sbjct: 213 ---DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNA 269

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S   +N   LE +     M    + PD +++ +V  AC  L+    G+ +H Y ++++
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D S + ++L+ MY +   +E    VF  +  K +  W AMI     ++   +A+  +
Sbjct: 330 FGGDIS-MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY 388

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            KM E+ G+ P+  T+ SV+ AC           +H  AIK GL     V N+L+DMYS+
Sbjct: 389 -KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSK 447

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              ++ +  +F ++  ++ VSW ++I G  I  +  +AL+  R+M+              
Sbjct: 448 CKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE------------- 494

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                  KPNS+TL++VL  C  + AL +GKEIHA+A+R  +  D  + +A++DMY +CG
Sbjct: 495 -----SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
               A   F+    ++V  WN+++  Y   G+ +  +EL   M+       E+ P+E+TF
Sbjct: 550 RKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-----EIHPDEITF 603

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           I+L  ACS SGMV+EG++ F  MK+ Y + P+  HYACVVD+LGRAG+++DAY  I  MP
Sbjct: 604 ISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMP 663

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
              D A  W +LL ACRIH+NVE+GEIAA+ +F  +     +Y+LL N+Y+    WDK  
Sbjct: 664 IRPD-AAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVS 722

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VR  M+E G+  +PGCSW+E   ++H FL+GD SH QS++++G L+    +M++ G+  
Sbjct: 723 KVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGN 782

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
             S     + E  +  + CGHSE+ AIAFG++NT PG  I V KNL +C+ CH   KFIS
Sbjct: 783 LKSSFTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFIS 841

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGD--YW 882
            I  REI +RDV  +HHFK+G CSCGD  YW
Sbjct: 842 TIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 296/871 (33%), Positives = 479/871 (54%), Gaps = 39/871 (4%)

Query: 18  SLQTHQPPATTATSLPLPG---SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ 74
           +LQTH+        + + G   S +   ++    LR         +A+     M    I+
Sbjct: 35  NLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLESMLELRIE 94

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
            +  A+ A+L+     +    G +++  +V        V + N L++M+ + G ++ D +
Sbjct: 95  VEEDAYIALLRLCEWRRAPDEGSRVY-ELVSSSKSCLCVRLGNALLSMFVRFG-NLLDAW 152

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            VF +++E+D  SWN ++    + G +D AL  +  ML++ + P+ +T  SV   C+ +S
Sbjct: 153 YVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               +  G+++H + +R G E +  + NAL+ MY K G + +A+ LF     RD +SWN 
Sbjct: 213 ---DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNA 269

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S   +N   LE +     M    + PD +++ +V  AC  L+    G+ +H Y ++++
Sbjct: 270 MISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSE 329

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D S + ++L+ MY +   +E    VF  +  K +  W AMI     ++   +A+  +
Sbjct: 330 FGGDIS-MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY 388

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            KM E+ G+ P+  T+ SV+ AC           +H  AIK GL     V N+L+DMYS+
Sbjct: 389 -KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSK 447

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              ++ +  +F ++  ++ VSW ++I G  I  +  +AL+  R+M+              
Sbjct: 448 CKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE------------- 494

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                  KPNS+TL++VL  C  + AL +GKEIHA+A+R  +  D  + +A++DMY +CG
Sbjct: 495 -----SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
               A   F+    ++V  WN+++  Y   G+ +  +EL   M+       E+ P+E+TF
Sbjct: 550 RKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-----EIHPDEITF 603

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           I+L  ACS SGMV+EG++ F  MK+ Y + P+  HYACVVD+LGRAG+++DAY  I  MP
Sbjct: 604 ISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMP 663

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
              D A  W +LL ACRIH+NVE+GEIAA+ +F  +     +Y+LL N+Y+    WDK  
Sbjct: 664 IRPD-AAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVS 722

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VR  M+E G+  +PGCSW+E   ++H FL+GD SH QS++++G L+    +M++ G+  
Sbjct: 723 KVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGN 782

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
             S     + E  +  + CGHSE+ AIAFG++NT PG  I V KNL +C+ CH   KFIS
Sbjct: 783 LKSSFTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFIS 841

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGD--YW 882
            I  REI +RDV  +HHFK+G CSCGD  YW
Sbjct: 842 TIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/775 (36%), Positives = 442/775 (57%), Gaps = 46/775 (5%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           A++L+  Y    S    + +++      D+   NS++ +L    + DL   +        
Sbjct: 60  ASSLLLRYASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSLPTL-RADLLFPS-------- 110

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLG-------RQVHGNSLRVG-EWNTFIMNALMAMY 227
             P SF+    A + ++   R G+          R +H  ++  G   + F+ +AL  +Y
Sbjct: 111 --PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLY 168

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
             L R +DA+ +F +    D V WNT+++ LS ++  LEA  F+R      ++PD  ++A
Sbjct: 169 FTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEA-LEA--FVRMAGAGSVRPDSTTLA 225

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           SVLPA + +     G+ +HA+  +   L  +  V + L+ +Y  C ++EC R +FD +  
Sbjct: 226 SVLPAAAEVANTTMGRCVHAFGEKCG-LAQHEHVVTGLISLYAKCGDMECARHLFDRMEG 284

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
             +  +NA+I+GY  N     ++ LF ++  + GL P+++T+ +++P        P    
Sbjct: 285 PDLVTYNALISGYSINGMVGSSVELFKELVGM-GLRPSSSTLVALIPVHSPFGHEPLAGC 343

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H H +K GL  +  V  AL  +Y R   ++ ++  FD M  +   SWN MI+GY   G 
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGL 403

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              A+ L ++MQ                  L  +PN +T+ + L  C  L AL+ GK +H
Sbjct: 404 TEMAVALFQQMQ-----------------ALNVRPNPLTISSALSACAQLGALSLGKWVH 446

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
                  L  +V V +AL+DMY KCG +  AR +FD M  +NV++WNV+I  YG+HG+G 
Sbjct: 447 KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGA 506

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E L+L K+M+        + P   TF+++  ACSH G+V EG  +F  M  DYGI P  +
Sbjct: 507 EALKLYKDMM-----DAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIE 561

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           H  C+VDLLGRAG++++A++LI+  P      G W +LLGAC +H++ ++ ++A+Q LF 
Sbjct: 562 HCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFE 621

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP+   +YVLLSN+Y+S + + +A  VR++ K   + K PGC+ IE GD  H F+AGD 
Sbjct: 622 LEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDR 681

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H QS+ ++ +LE L+ +M + GY PDT   L++V EEEKE ++  HSEKLAIAFG+LNT
Sbjct: 682 AHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNT 741

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PGT IR+ KNLRVC DCH ATK ISK+  R I++RD  RFHHF++G CSCGDYW
Sbjct: 742 EPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 280/589 (47%), Gaps = 60/589 (10%)

Query: 22  HQPPATTATSLPLPGSQTRCKESWIESL-RSEARSNQF-REAILSYIEMTRSDI---QPD 76
           H P    A+SL L  +  R   + +  L R+  R ++F R ++L  +   R+D+    PD
Sbjct: 57  HAP----ASSLLLRYASLRSPPAHLLRLYRAFPRPDRFLRNSLLRSLPTLRADLLFPSPD 112

Query: 77  NFAFPAVLKAVA------GIQDLSLG----KQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           +F+F     ++A      GI   S      + +HA  V  G+   +  VA+ L  +Y   
Sbjct: 113 SFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNF-VASALAKLYFTL 171

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVS 185
            S   D  KVFD +   D V WN+++A L        ALEAF RM    +V P S TL S
Sbjct: 172 -SRGNDARKVFDAVPSPDTVLWNTLLAGL----SGSEALEAFVRMAGAGSVRPDSTTLAS 226

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           V  A + ++      +GR VH    + G   +  ++  L+++YAK G ++ A+ LF   E
Sbjct: 227 VLPAAAEVANTT---MGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRME 283

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
             DLV++N ++S  S N     +V   +++   G++P   ++ +++P  S          
Sbjct: 284 GPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGC 343

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +HA+ ++   L  N+ V +AL  +YC   +++  RR FD + +K +  WNAMI+GY QN 
Sbjct: 344 LHAHVVKAG-LDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNG 402

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             E A+ LF +M+ +  + PN  T+SS + AC +  A    + +H       L  + YV 
Sbjct: 403 LTEMAVALFQQMQAL-NVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVM 461

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            AL+DMY + G I  ++ IFD M+ ++ VSWN MI+GY + GQ  +AL L ++M +    
Sbjct: 462 TALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLH 521

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-----LATDV 539
                            P S T ++VL  C     + +G  +     R+M     +   +
Sbjct: 522 -----------------PTSSTFLSVLYACSHGGLVKEGTTV----FRSMTSDYGITPGI 560

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNV--ITWNVIIMAYGMHGEG 586
              + +VD+  + G L  A  +    P   V    W  ++ A  +H +G
Sbjct: 561 EHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDG 609


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 317/893 (35%), Positives = 466/893 (52%), Gaps = 116/893 (12%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG-------------------LSS 112
           D+ P +FA  ++LK    +  +   +QIH  ++  G                     +S 
Sbjct: 28  DVSPTHFA--SLLKECRSVNTV---RQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
            ++   +V  Y  CG+   D   V +R+T    V WN ++    + G  D A+     ML
Sbjct: 83  KSLGTGVVASYLACGATK-DALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRML 141

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
            +  +P  FTL     AC  L        GR +HG     G E N F+ NAL+AMY++ G
Sbjct: 142 RAGTKPDHFTLPYALKACGELP---SYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198

Query: 232 RVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL------RGIKPD 282
            ++DA  +F     +   D++SWN+IV++  +      A+    +M++         + D
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +SI ++LPAC+ L+ L   KEIH+YA+RN    D +FV +AL+D Y  C  +    +VF
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFAD-AFVCNALIDTYAKCGSMNDAVKVF 317

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE------------------------ 378
           + +  K +  WNAM+TGY Q+     A  LF  M +                        
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377

Query: 379 ----------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL----------- 417
                     + G  PN+ T+ S++ AC    A      IH +++K  L           
Sbjct: 378 EALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDG 437

Query: 418 -GRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALML 474
            G D  V NAL+DMYS+    + +++IFD +    R+ V+W  MI GY   G   DAL +
Sbjct: 438 DGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKI 497

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRP---KPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             EM                  + +P    PN+ T+  +L  C  L+AL  GK+IHAY  
Sbjct: 498 FSEM------------------ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVT 539

Query: 532 RNMLATDVV--VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           R+      V  V + L+DMY+KCG ++ AR VFD MP RN ++W  ++  YGMHG G+E 
Sbjct: 540 RHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEA 599

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L++   M   G       P++++F+ L  ACSHSGMV +G++ F  M+ DY +  S +HY
Sbjct: 600 LDIFDKMQKAG-----FVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHY 654

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           ACV+DLL R G+++ A++ I  MP E   A  W +LL ACR+H NVE+ E A   L  ++
Sbjct: 655 ACVIDLLARCGRLDKAWKTIQEMPME-PSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
            +    Y L+SNIY++A+ W     +R+ MK+ G++K PGCSW++       F  GD SH
Sbjct: 714 AENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSH 773

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
             S +++  LE L  R++  GYVP+T+  LH+V++EEK  LL  HSEKLA+A+G+L T P
Sbjct: 774 PLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSP 833

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G  IR+ KNLRVC DCH A  +ISKI   EII+RD  RFHHFKNG+CSCG YW
Sbjct: 834 GCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 178/624 (28%), Positives = 288/624 (46%), Gaps = 94/624 (15%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R   +      AI     M R+  +PD+F  P  LKA   +     G+ +H  + 
Sbjct: 117 WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLIC 176

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
             G+  S+V V N LV MY +CGS + D   VFD IT K   D +SWNS++A   +    
Sbjct: 177 CNGFE-SNVFVCNALVAMYSRCGS-LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNP 234

Query: 162 DLALEAFRMMLY------SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             ALE F  M        +N      ++V++  AC++L     L   +++H  ++R G +
Sbjct: 235 RTALELFSEMSMIVHEKATNERSDIISIVNILPACASLK---ALPQIKEIHSYAIRNGTF 291

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF---------- 264
            + F+ NAL+  YAK G ++DA  +F   E +D+VSWN +V+  +Q+  F          
Sbjct: 292 ADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENM 351

Query: 265 -------------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                                     EA+   +QM L G +P+ V+I S+L AC+ L  L
Sbjct: 352 RKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGAL 411

Query: 300 DTGKEIHAYALRNDIL-----------IDNSFVGSALVDMYCNCREVECGRRVFDFIS-- 346
             G EIHAY+L+  +L            ++  V +AL+DMY  CR  +  R +FD I   
Sbjct: 412 SQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRR 471

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           ++ +  W  MI GY Q     +AL +F +M  +   + PNA T+S ++ AC    A    
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMG 531

Query: 406 EGIHGHAIKLGLGRDR--YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           + IH +  +         +V N L+DMYS+ G ++ ++ +FD M  R+ VSW +M++GY 
Sbjct: 532 KQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G+  +AL +  +MQ                      P+ I+ + +L  C     + +G
Sbjct: 592 MHGRGKEALDIFDKMQKAGF-----------------VPDDISFLVLLYACSHSGMVDQG 634

Query: 524 KEIHAYAIRNMLATDVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
                   R+    DVV      + ++D+ A+CG L+ A +    MP+  + + W  ++ 
Sbjct: 635 LNYFDIMRRDY---DVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLS 691

Query: 579 AYGMHGE---GQEVLELLKNMVAE 599
           A  +H      +  L  L NM AE
Sbjct: 692 ACRVHSNVELAEYALNKLVNMKAE 715



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 172/356 (48%), Gaps = 26/356 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+    +EA+ ++ +M     +P++    ++L A A +  LS G +IHA+ 
Sbjct: 362 TWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYS 421

Query: 104 VK-----------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNS 150
           +K                  + V N L++MY KC S       +FD I   E++ V+W  
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRS-FKAARSIFDSIPRRERNVVTWTV 480

Query: 151 MIATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           MI    ++G  + AL+ F  M+     V P+++T+  + +AC++L+    LR+G+Q+H  
Sbjct: 481 MIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLA---ALRMGKQIHAY 537

Query: 209 SLRVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             R  E+     F+ N L+ MY+K G VD A+ +F S   R+ VSW +++S    + +  
Sbjct: 538 VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+    +M   G  PD +S   +L ACSH  M+D G        R+  ++ ++   + +
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACV 657

Query: 326 VDMYCNC-REVECGRRVFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
           +D+   C R  +  + + +   +    +W A+++    +   E  E AL   + M+
Sbjct: 658 IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 309/844 (36%), Positives = 480/844 (56%), Gaps = 45/844 (5%)

Query: 47  ESLRSEARSNQFREAILSYIEMTRSDI-QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK 105
            +L   AR     +A+  ++++ R    +    A   VLK    + D  LGKQ+H   ++
Sbjct: 72  HALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIR 131

Query: 106 YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
            G+    V V  +LV+MY K  S + D  KVF+ + +++ V+W S++    + G     +
Sbjct: 132 CGHDRGDVGVGTSLVDMYMKWHS-VVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVM 190

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALM 224
           E F  M    V P+S T  SV    S ++ +  + LGR+VH  S++ G  +T F+ N+LM
Sbjct: 191 ELFFRMRAEGVWPNSVTFASVL---SVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLM 247

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            MYAK G V++A+ +F   E RD+VSWNT+++ L  N   LEA+                
Sbjct: 248 NMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQS 307

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCNCREVECGRRVF 342
           + A+V+  C++++ L   +++H+  L+      +S+  V +AL+D Y    ++     +F
Sbjct: 308 TYATVIKLCANIKQLGLARQLHSSVLKRGF---HSYGNVMTALMDAYSKAGQLGNALDIF 364

Query: 343 DFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
             +S  + +  W AMI G  QN     A  LF +M E  G+ PN  T S+++ A V S  
Sbjct: 365 LLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRE-DGVAPNDFTYSTILTASVAS-- 421

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            P +  IH   IK        V  AL+  YS++   E + +IF  ++ +D VSW+ M+T 
Sbjct: 422 LPPQ--IHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTC 479

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-L 520
           Y    Q GD+                 N++ +  T+   KPN  T+ +V+  C + +A +
Sbjct: 480 Y---AQAGDS-------------DGATNIF-IKMTMHGLKPNEFTISSVIDACASPTAGV 522

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G++ HA +I++     + V SALV MYA+ G +  A+ +F+    R++++WN ++  Y
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG  Q+ L++ + M AEG     ++ + VTF+++   C+H+G+V EG   F  M  DY
Sbjct: 583 AQHGYSQKALDVFRQMEAEG-----IEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDY 637

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG--AWSSLLGACRIHQNVEIG 698
           GI P+ +HYAC+VDL  RAGK+++A  LI  M      AG   W +LLGAC++H+NVE+G
Sbjct: 638 GITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF---PAGPMVWRTLLGACKVHKNVELG 694

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           ++AA+ L  LEP  ++ YVLLSNIYS+A  W +  +VRK M    V+KE GCSWI+  ++
Sbjct: 695 KLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNK 754

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+A D SH  SEQ++  L  ++ ++++EGY PDTS  LH V EE+KE +L  HSE+L
Sbjct: 755 VHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERL 814

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AFG++ TPPG  + + KNLRVC DCH   K +SKIE REI++RD  RFHHF +G CSC
Sbjct: 815 ALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSC 874

Query: 879 GDYW 882
           GD+W
Sbjct: 875 GDFW 878



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 263/546 (48%), Gaps = 35/546 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    +     + +  +  M    + P++  F +VL  VA    + LG+++HA  
Sbjct: 172 TWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQS 231

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G   S+V V N+L+NMY KCG  + +   VF  +  +D VSWN+++A L   G    
Sbjct: 232 VKFGC-CSTVFVCNSLMNMYAKCGL-VEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLE 289

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMN 221
           AL+ F     S    +  T  +V   C+N+ +   L L RQ+H + L+ G ++++  +M 
Sbjct: 290 ALQLFHDSRSSITMLTQSTYATVIKLCANIKQ---LGLARQLHSSVLKRG-FHSYGNVMT 345

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           ALM  Y+K G++ +A  +F      +++VSW  +++   QN     A     +M   G+ 
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+  + +++L A     +     +IHA  ++ +     S VG+AL+  Y      E    
Sbjct: 406 PNDFTYSTILTA----SVASLPPQIHAQVIKTNYEC-TSIVGTALLASYSKLCNTEEALS 460

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I  K +  W+AM+T Y Q    + A  +FIKM  + GL PN  T+SSV+ AC    
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKM-TMHGLKPNEFTISSVIDACASPT 519

Query: 401 AFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           A  D     H  +IK        V +AL+ MY+R G IE ++ IF+    RD VSWN+M+
Sbjct: 520 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSML 579

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           +GY    QHG +   L   + ME E       ++D          +T ++V+ GC     
Sbjct: 580 SGY---AQHGYSQKALDVFRQMEAEG-----IEMD---------GVTFLSVIMGCAHAGL 622

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPV-RNVITWNVII 577
           + +G+       R+   T  +   A +VD+Y++ G L+ A  + + M      + W  ++
Sbjct: 623 VEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLL 682

Query: 578 MAYGMH 583
            A  +H
Sbjct: 683 GACKVH 688



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 207/430 (48%), Gaps = 18/430 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G +TR   SW   +     +    EA+  + +   S        +  V+K  A I+ L L
Sbjct: 265 GMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGL 324

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVSWNSMIA 153
            +Q+H+ V+K G+  S   V   L++ Y K G   +  D++ +      ++ VSW +MI 
Sbjct: 325 ARQLHSSVLKRGFH-SYGNVMTALMDAYSKAGQLGNALDIFLLMS--GSQNVVSWTAMIN 381

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
              + G   LA   F  M    V P+ FT  ++  A           L  Q+H   ++  
Sbjct: 382 GCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA-------SLPPQIHAQVIKTN 434

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            E  + +  AL+A Y+KL   ++A ++FK  + +D+VSW+ +++  +Q      A     
Sbjct: 435 YECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFI 494

Query: 273 QMALRGIKPDGVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           +M + G+KP+  +I+SV+ AC S    +D G++ HA ++++    D   V SALV MY  
Sbjct: 495 KMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCH-DALCVSSALVSMYAR 553

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              +E  + +F+  +D+ +  WN+M++GY Q+ Y ++AL +F +M E  G+  +  T  S
Sbjct: 554 KGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQM-EAEGIEMDGVTFLS 612

Query: 392 VVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV- 449
           V+  C  +    + +      A   G+         ++D+YSR G+++ + ++ + M   
Sbjct: 613 VIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFP 672

Query: 450 RDTVSWNTMI 459
              + W T++
Sbjct: 673 AGPMVWRTLL 682


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/840 (35%), Positives = 467/840 (55%), Gaps = 31/840 (3%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W+  +   +++    EAIL + +M  S+I P  +   +VL A   IQ   LG+Q+H  V
Sbjct: 228  TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K+G+  S   V N LV +Y +    +    ++F  +  +D VS+NS+I+ L + G  D 
Sbjct: 288  IKWGFH-SETYVCNGLVALYSR-SRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
            ALE F  M    ++P   T+ S+  AC+++     L  G Q+H ++++ G     I+  +
Sbjct: 346  ALELFTKMQRDCLKPDCITVASLLSACASVG---ALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ +Y+K   V+ A   F + E  ++V WN ++ +  Q D   ++    RQM + G+ P+
Sbjct: 403  LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
              +  S+L  C+ L  L  G++IH + ++    + N +V S L+DMY    ++    R+ 
Sbjct: 463  QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL-NVYVCSVLIDMYAKYGQLALALRIL 521

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              + +  +  W AMI GY Q++   EAL LF +ME   G+  +    +S + AC    A 
Sbjct: 522  RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME-YRGIQFDNIGFASAISACAGIRAL 580

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
               + IH  +   G G D  + NAL+ +Y+R GRI+ +   F+ +  ++ +SWN++++G 
Sbjct: 581  RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 463  TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               G   +AL +   M   E E                  N  T  + +    +L+ + +
Sbjct: 641  AQSGYFEEALQVFVRMLRTEAE-----------------VNMFTYGSAISAAASLANIKQ 683

Query: 523  GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            G++IH+  ++    ++  V ++L+ +YAK G ++ A R F+ M  RNVI+WN +I  Y  
Sbjct: 684  GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743

Query: 583  HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            HG G E L L + M   G     + PN VTF+ + +ACSH G+V EG+D F  M   + +
Sbjct: 744  HGCGMEALRLFEEMKVCG-----IMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDL 798

Query: 643  EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             P  +HY CVVDLLGRAG+++ A + I  MP   D A  W +LL AC IH+N+EIGE AA
Sbjct: 799  VPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD-AMIWRTLLSACVIHKNIEIGERAA 857

Query: 703  QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             +L  LEP+ ++ YVL+SNIY+ ++ W      RK MK+ GV+KEPG SWIE  + +H F
Sbjct: 858  HHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAF 917

Query: 763  LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             AGD  H  + Q++ ++ +L+ R  + GYV D+  +L+   + +K+ +   HSEKLAIAF
Sbjct: 918  YAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAF 977

Query: 823  GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G+L+      IRV KNLRVCNDCH   K++SKI +R II+RD  RFHHF  G CSC D+W
Sbjct: 978  GLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 284/596 (47%), Gaps = 44/596 (7%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++H  + K G+    + + ++LV+ Y + G D     KVFD  + +   SWN MI     
Sbjct: 79  RLHCRISKSGFDGEPLLI-DSLVDNYFRHG-DQHGAVKVFDENSNRSVFSWNKMIHVFVA 136

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
                     FR ML   + P+ +T   V  AC  +         +QVH  +   G + +
Sbjct: 137 QKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC--VGGDIAFNYVKQVHSRTFYYGFDSS 194

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N L+ +Y+K G ++ AK +F     +D+V+W  ++S LSQN    EA++    M  
Sbjct: 195 PLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHA 254

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             I P    ++SVL A + +++ + G+++H   ++       ++V + LV +Y   R++ 
Sbjct: 255 SEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG-FHSETYVCNGLVALYSRSRKLI 313

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              R+F  ++ +    +N++I+G  Q  + + AL LF KM+    L P+  T++S++ AC
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSAC 372

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A      +H HAIK G+  D  ++ +L+D+YS+   +E +   F   E  + V WN
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWN 432

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            M+  Y       D+  + R+MQ ME                   PN  T  ++L  C +
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQ-MEG----------------MIPNQFTYPSILRTCTS 475

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  G++IH + I+     +V V S L+DMYAK G L  A R+   +P  +V++W  +
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK- 635
           I  Y  H    E L+L + M   G     ++ + + F +  +AC+    + +G  +  + 
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRG-----IQFDNIGFASAISACAGIRALRQGQQIHAQS 590

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-----AWSSLL 686
               +G + S ++   ++ L  R G++++AY         F+K G     +W+SL+
Sbjct: 591 YAAGFGADLSINN--ALISLYARCGRIQEAY-------LAFEKIGDKNNISWNSLV 637



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 29/300 (9%)

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           MEE  G+  N      ++  C+ S +  +   +H    K G   +  + ++L+D Y R G
Sbjct: 49  MEE-RGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHG 107

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
               +  +FD+   R   SWN MI  +     +     L R M              L E
Sbjct: 108 DQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRM--------------LAE 153

Query: 496 TVLRPKPNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            +    PN  T   VL  C G   A    K++H+        +  +V + L+D+Y+K G 
Sbjct: 154 GI---TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGY 210

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A++VF+ + +++++TW  +I     +G  +E + L  +M A      E+ P      
Sbjct: 211 IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS-----EIFPTPYVLS 265

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
           ++ +A +   +   G  L + +   +G     + Y C  +V L  R+ K+  A ++ + M
Sbjct: 266 SVLSASTKIQLFELGEQL-HCLVIKWGFH--SETYVCNGLVALYSRSRKLISAERIFSTM 322


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/684 (40%), Positives = 409/684 (59%), Gaps = 29/684 (4%)

Query: 204 QVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           Q+H  +LR+G    + F   AL+  Y + GRV DA   F     RD+ +WN ++S L +N
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EAV    +M + G+  D V+++SVLP C  L        +H YA+++  L D  FV
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHG-LDDELFV 207

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +A++D+Y     +E  R+VFD +S + +  WN++I+G+ Q      A+ +F  M + +G
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRD-SG 266

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG-RDRYVQNALMDMYSRMGRIEIS 440
           + P+  T+ S+  A  +         +H + ++ G    D    NA++DMY+++ +IE +
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAA 326

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD M VRD VSWNT+ITGY   G   +A+ +   MQ  E  K               
Sbjct: 327 QRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLK--------------- 371

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P   T ++VLP    L AL +G  +HA +I+  L  DV VG+ ++D+YAKCG L+ A  
Sbjct: 372 -PIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAML 430

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +F+  P R+   WN +I   G+HG G + L L   M  EG     + P+ VTF++L AAC
Sbjct: 431 LFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEG-----ISPDHVTFVSLLAAC 485

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           SH+G+V +G + F  M+  YGI+P   HYAC+VD+ GRAG+++DA+  I  MP + D A 
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSA- 544

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W +LLGACRIH NVE+G++A+QNLF L+P    +YVL+SN+Y+    WD   +VR  ++
Sbjct: 545 IWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVR 604

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGD--GSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
              ++K PG S IE    ++ F +G+    H Q E++   L +L  ++R  GYVPD S V
Sbjct: 605 RQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFV 664

Query: 799 LHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESR 858
           L +V E+EKE +L  HSE+LAIAFGI+NTPP T + + KNLRVC DCH ATK+ISKI  R
Sbjct: 665 LQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITER 724

Query: 859 EIILRDVRRFHHFKNGTCSCGDYW 882
           EII+RD  RFHHFK+G CSCGD+W
Sbjct: 725 EIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 19/455 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    R+ +  EA+  +  M    +  D     +VL     + D +L   +H + 
Sbjct: 137 AWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYA 196

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G     + V N ++++YGK G  + +V KVFD ++ +D V+WNS+I+   + G+   
Sbjct: 197 VKHGLD-DELFVCNAMIDVYGKLGM-LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVAS 254

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT---FIM 220
           A+E F  M  S V P   TL+S+A A +      G   GR VH   +R G W+       
Sbjct: 255 AVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG---GRSVHCYMVRRG-WDVGDIIAG 310

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GI 279
           NA++ MYAKL +++ A+ +F S   RD VSWNT+++   QN    EA+     M    G+
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGL 370

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KP   +  SVLPA SHL  L  G  +HA +++  + +D  +VG+ ++D+Y  C +++   
Sbjct: 371 KPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLD-VYVGTCVIDLYAKCGKLDEAM 429

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F+    +    WNA+I+G G + +  +AL LF +M++  G+ P+  T  S++ AC  +
Sbjct: 430 LLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ-EGISPDHVTFVSLLAACSHA 488

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWN 456
               D+     + ++   G     ++   ++DM+ R G+++ +     +M ++ D+  W 
Sbjct: 489 -GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWG 547

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            ++     C  HG+  M     QN+ E   +N  Y
Sbjct: 548 ALLGA---CRIHGNVEMGKVASQNLFELDPKNVGY 579



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 162/333 (48%), Gaps = 23/333 (6%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G  +R   +W   +    +  Q   A+  +  M  S + PD     ++  A+A   D+  
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +H ++V+ G+ +  +   N +V+MY K  S +    ++FD +  +D VSWN++I   
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKL-SKIEAAQRMFDSMPVRDAVSWNTLITGY 348

Query: 156 CRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
            + G    A+  +  M  +  ++P   T VSV  A S+L     L+ G ++H  S++ G 
Sbjct: 349 MQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLG---ALQQGTRMHALSIKTGL 405

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             + ++   ++ +YAK G++D+A  LF+    R    WN ++S +  +    +A+    Q
Sbjct: 406 NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIH-----AYALRNDILIDNSFVGSALVDM 328
           M   GI PD V+  S+L ACSH  ++D G+        AY ++    I   +  + +VDM
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKP---IAKHY--ACMVDM 520

Query: 329 YCNCREVECGRRVFDFISDKKI----ALWNAMI 357
           +    +++     FDFI +  I    A+W A++
Sbjct: 521 FGRAGQLD---DAFDFIRNMPIKPDSAIWGALL 550


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/840 (35%), Positives = 466/840 (55%), Gaps = 31/840 (3%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W+  +   +++    EAIL + +M  S+I P  +   +VL A   IQ   LG+Q+H  V
Sbjct: 228  TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K+G+  S   V N LV +Y +    +    ++F  +  +D VS+NS+I+ L + G  D 
Sbjct: 288  IKWGFH-SETYVCNGLVALYSR-SRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDR 345

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
            ALE F  M    ++P   T+ S+  AC+++     L  G Q+H ++++ G     I+  +
Sbjct: 346  ALELFTKMQRDCLKPDCITVASLLSACASVG---ALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ +Y+K   V+ A   F   E  ++V WN ++ +  Q D   ++    RQM + G+ P+
Sbjct: 403  LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
              +  S+L  C+ L  L  G++IH + ++    + N +V S L+DMY    ++    R+ 
Sbjct: 463  QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL-NVYVCSVLIDMYAKYGQLALALRIL 521

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              + +  +  W AMI GY Q++   EAL LF +ME   G+  +    +S + AC    A 
Sbjct: 522  RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME-YRGIQFDNIGFASAISACAGIRAL 580

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
               + IH  +   G G D  + NAL+ +Y+R GRI+ +   F+ +  ++ +SWN++++G 
Sbjct: 581  RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 463  TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               G   +AL +   M   E E                  N  T  + +    +L+ + +
Sbjct: 641  AQSGYFEEALQVFVRMLRTEAE-----------------VNMFTYGSAISAAASLANIKQ 683

Query: 523  GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            G++IH+  ++    ++  V ++L+ +YAK G ++ A R F+ M  RNVI+WN +I  Y  
Sbjct: 684  GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743

Query: 583  HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            HG G E L L + M   G     + PN VTF+ + +ACSH G+V EG+D F  M   + +
Sbjct: 744  HGCGMEALRLFEEMKVCG-----IMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDL 798

Query: 643  EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             P  +HY CVVDLLGRAG+++ A + I  MP   D A  W +LL AC IH+N+EIGE AA
Sbjct: 799  VPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD-AMIWRTLLSACVIHKNIEIGERAA 857

Query: 703  QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             +L  LEP+ ++ YVL+SNIY+ ++ W      RK MK+ GV+KEPG SWIE  + +H F
Sbjct: 858  HHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAF 917

Query: 763  LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             AGD  H  + Q++ ++ +L+ R  + GYV D+  +L+   + +K+ +   HSEKLAIAF
Sbjct: 918  YAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAF 977

Query: 823  GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G+L+      IRV KNLRVCNDCH   K++SKI +R II+RD  RFHHF  G CSC D+W
Sbjct: 978  GLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 284/596 (47%), Gaps = 44/596 (7%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++H  + K G+    + + ++LV+ Y + G D     KVFD  + +   SWN MI     
Sbjct: 79  RLHCRISKSGFDGEPLLI-DSLVDNYFRHG-DQHGAVKVFDENSNRSVFSWNKMIHVFVA 136

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
                     FR ML   + P+ +T   V  AC  +         +QVH  +   G + +
Sbjct: 137 QKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC--VGGDIAFNYVKQVHSRTFYYGFDSS 194

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N L+ +Y+K G ++ AK +F     +D+V+W  ++S LSQN    EA++    M  
Sbjct: 195 PLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHA 254

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             I P    ++SVL A + +++ + G+++H   ++       ++V + LV +Y   R++ 
Sbjct: 255 SEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG-FHSETYVCNGLVALYSRSRKLI 313

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              R+F  ++ +    +N++I+G  Q  + + AL LF KM+    L P+  T++S++ AC
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSAC 372

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A      +H HAIK G+  D  ++ +L+D+YS+   +E +   F   E  + V WN
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWN 432

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            M+  Y       D+  + R+MQ ME                   PN  T  ++L  C +
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQ-MEG----------------MIPNQFTYPSILRTCTS 475

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  G++IH + I+     +V V S L+DMYAK G L  A R+   +P  +V++W  +
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK- 635
           I  Y  H    E L+L + M   G     ++ + + F +  +AC+    + +G  +  + 
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRG-----IQFDNIGFASAISACAGIRALRQGQQIHAQS 590

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-----AWSSLL 686
               +G + S ++   ++ L  R G++++AY         F+K G     +W+SL+
Sbjct: 591 YAAGFGADLSINN--ALISLYARCGRIQEAY-------LAFEKIGDKNNISWNSLV 637



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 29/300 (9%)

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           MEE  G+  N      ++  C+ S +  +   +H    K G   +  + ++L+D Y R G
Sbjct: 49  MEE-RGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHG 107

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
               +  +FD+   R   SWN MI  +     +     L R M              L E
Sbjct: 108 DQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRM--------------LAE 153

Query: 496 TVLRPKPNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            +    PN  T   VL  C G   A    K++H+        +  +V + L+D+Y+K G 
Sbjct: 154 GI---TPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGY 210

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A++VF+ + +++++TW  +I     +G  +E + L  +M A      E+ P      
Sbjct: 211 IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS-----EIFPTPYVLS 265

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
           ++ +A +   +   G  L + +   +G     + Y C  +V L  R+ K+  A ++ + M
Sbjct: 266 SVLSASTKIQLFELGEQL-HCLVIKWGFH--SETYVCNGLVALYSRSRKLISAERIFSTM 322


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 292/761 (38%), Positives = 435/761 (57%), Gaps = 31/761 (4%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C E W   +R      QF  A+L Y +M      PD + FP V+KA  G+  ++LG+ +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
             +   G+ L  V V ++L+  Y + G  + D   +FDR+  KD V WN M+    + G 
Sbjct: 171 DKIQFMGFELD-VFVGSSLIKFYSENGC-IHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           WD A   F  M  +   P+S T   V   C++      +  G Q+HG  +  G E ++ +
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCAS---EIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N L+AMYAK G + DA+ LF      DLV+WN ++S   QN    EA     +M    +
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM 345

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KPD ++ +S LP  S    L  GKEIH Y +RN + +D  F+ SAL+D+Y  CR+VE  R
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLD-VFLKSALIDIYFKCRDVEMAR 404

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           ++FD  +   I +  AMI+GY  N  +  AL +F  + +   +  N+ T++SV+PAC   
Sbjct: 405 KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ-ERMRANSVTLASVLPACAGL 463

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A    + +HGH +K G G   YV +A+MDMY++ GR++++   F  +  +D V WN+MI
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 523

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           T  +  G+  +A+ L R+M                  +   K + +++   L  C  L A
Sbjct: 524 TSCSQNGKPEEAIDLFRQM-----------------GMAGTKYDCVSISAALSACANLPA 566

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GKEIHA+ +R    +D+   SAL+DMY+KCG L+ A RVFD M  +N ++WN II A
Sbjct: 567 LHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAA 626

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           YG HG  ++ L L   M+ +G     ++P+ VTF+A+ +AC H+G V EG+  F  M ++
Sbjct: 627 YGNHGRLKDSLNLFHGMLGDG-----IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEE 681

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            GI    +HYAC+VDL GRAG++ +A+ +IN MP   D AG W +LLGACR+H NVE+ E
Sbjct: 682 LGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPD-AGVWGTLLGACRLHGNVELAE 740

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
           +A++NLF L+P  + +YVLLSN++++A  W+  + +R  MKE GV+K PGCSWI+  +  
Sbjct: 741 VASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTT 800

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           H F+A D SH QS Q++  L+NL   +RKEGYVP     +H
Sbjct: 801 HMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMH 841



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 184/673 (27%), Positives = 334/673 (49%), Gaps = 49/673 (7%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++L+       LS G+Q HA ++  G G + + +   L+ MY  CG+ + D   +F ++ 
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGI-LGTKLLGMYVLCGAFL-DAKNIFYQLR 108

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
                 WN MI      G++D AL  +  ML     P  +T   V  AC  L   + + L
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL---NSVAL 165

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR VH     +G E + F+ ++L+  Y++ G + DA+ LF     +D V WN +++   +
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N  +  A     +M      P+ V+ A VL  C+   M++ G ++H   + + + +D S 
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMD-SP 284

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V + L+ MY  C  +   RR+FD +    +  WN MI+GY QN + +EA  LF +M   A
Sbjct: 285 VANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMIS-A 343

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + P++ T SS +P           + IH + I+ G+  D ++++AL+D+Y +   +E++
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + IFD     D V    MI+GY + G + +AL + R +  ++E               R 
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL--LQE---------------RM 446

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           + NS+TL +VLP C  L+AL  GKE+H + ++N       VGSA++DMYAKCG L+ A +
Sbjct: 447 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 506

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
            F  +  ++ + WN +I +   +G+ +E ++L + M   G+     K + V+  A  +AC
Sbjct: 507 TFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT-----KYDCVSISAALSAC 561

Query: 621 SHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFD 677
           ++   +  G ++  + M+  +      D +A   ++D+  + G ++ A ++ + M  E  
Sbjct: 562 ANLPALHYGKEIHAFMMRGAF----RSDLFAESALIDMYSKCGNLDLACRVFDTM--EEK 615

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLLSNIYSSAQLWDK 731
              +W+S++ A   H  ++     + NLF       ++PD  +   ++S    + Q+ + 
Sbjct: 616 NEVSWNSIIAAYGNHGRLK----DSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 671

Query: 732 AMDVRKKMKEMGV 744
               R   +E+G+
Sbjct: 672 IHYFRCMTEELGI 684



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 27/390 (6%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S+L  C+    L  G++ HA  L N I   N  +G+ L+ MY  C      + +F  +
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGY-NGILGTKLLGMYVLCGAFLDAKNIFYQL 107

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                  WN MI G+      + AL+ + KM    G  P+  T   V+ AC    +    
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG-CGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H     +G   D +V ++L+  YS  G I  ++ +FD M  +D V WN M+ GY   
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A  +  EM+  E                   PNS+T   VL  C +   +  G +
Sbjct: 227 GDWDNATGVFMEMRRTET-----------------NPNSVTFACVLSVCASEIMINFGSQ 269

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H   + + L  D  V + L+ MYAKCG L  ARR+FD+MP  +++TWN +I  Y  +G 
Sbjct: 270 LHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGF 329

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEP 644
             E   L   M++       +KP+ +TF +     S    + +G ++  Y +++  G+  
Sbjct: 330 MDEASCLFHEMIS-----ARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN--GVSL 382

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
                + ++D+  +   VE A ++ +   P
Sbjct: 383 DVFLKSALIDIYFKCRDVEMARKIFDQRTP 412



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 23/288 (7%)

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           A  + S++  C            H   +  G+G +  +   L+ MY   G    +K IF 
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            + +  +  WN MI G+T+ GQ   AL+   +M                       P+  
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGT-----------------LPDKY 148

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   V+  CG L+++A G+ +H          DV VGS+L+  Y++ GC++ AR +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P ++ + WNV++  Y  +G+      +   M     R  E  PN VTF  + + C+   M
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEM-----RRTETNPNSVTFACVLSVCASEIM 263

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           ++ G  L + +    G+E        ++ +  + G + DA +L +MMP
Sbjct: 264 INFGSQL-HGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP 310


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/784 (36%), Positives = 461/784 (58%), Gaps = 38/784 (4%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K++HA ++ +G    ++ ++  L+N+Y   G D+      FD I +K+  SWNS+I+   
Sbjct: 39  KKLHALLLVFGKS-QNIVLSTKLINLYVTHG-DISLSRSTFDYIHKKNIFSWNSIISAYV 96

Query: 157 RFGKWDLAL----EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           RFGK+  A+    + F M    ++ P  +T   +  AC +L        G++VH    ++
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD------GKKVHCCVFKM 150

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E + F+  +L+ +Y++ G +D A  +F     +D+ SWN ++S   QN     A+  L
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M   G+K D +++AS+LP C+  + +  G  IH + L++  L  + FV +AL++MY  
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG-LDSDVFVSNALINMYSK 269

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              ++  + VFD +  + +  WN++I  Y QN  D    + F K  ++ G+ P+  T+ S
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN-DPSTALRFFKGMQLGGIRPDLLTVVS 328

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +     +         I G  I+   L +D  + NAL++MY+++G +  + T+FD +  +
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           DT+SWNT++TGYT  G   +A+    +  NM EE  R+ +           PN  T +++
Sbjct: 389 DTISWNTLVTGYTQNGLASEAI----DAYNMMEE-CRDTI-----------PNQGTWVSI 432

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           +P    + AL +G +IHA  I+N L  DV V + L+D+Y KCG L  A  +F  +P    
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN II + G+HG G+E L+L K+M+AE      VK + +TF++L +ACSHSG+V EG 
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAE-----RVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             F  M+ +YGI+PS  HY C+VDLLGRAG +E AY+L+  MP + D A  W +LL AC+
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPD-ASIWGALLSACK 606

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           I+ N E+G +A+  L  ++ +   +YVLLSNIY++ + W+  + VR   ++ G+RK PG 
Sbjct: 607 IYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGW 666

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S +  G +   F  G+ +H +  +++  L+ LS +M+  GYVPD S V  ++ E+EKE +
Sbjct: 667 SSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQI 726

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSE+LAIAFGI++TPP + IR+ KNLRVC DCH ATK+IS+I  REI++RD  RFHH
Sbjct: 727 LNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHH 786

Query: 871 FKNG 874
           FK+G
Sbjct: 787 FKDG 790



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 297/622 (47%), Gaps = 49/622 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR----SDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           SW   + +  R  ++ EA+    ++        ++PD + FP +LKA   + D   GK++
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKV 143

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRF 158
           H  V K G+    V VA +LV++Y + G  + DV +KVF  +  KD  SWN+MI+  C+ 
Sbjct: 144 HCCVFKMGFE-DDVFVAASLVHLYSRYG--VLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G    AL     M    V+  + T+ S+   C   ++ D +  G  +H + L+ G + + 
Sbjct: 201 GNAAGALGVLNRMKGEGVKMDTITVASILPVC---AQSDDVINGVLIHLHVLKHGLDSDV 257

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NAL+ MY+K GR+ DA+ +F   E RDLVSWN+I+++  QN+    A+ F + M L 
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GI+PD +++ S+    S L      + I  + +R + L  +  +G+ALV+MY     + C
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              VFD +  K    WN ++TGY QN    EA+  +  MEE     PN  T  S++PA  
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              A      IH   IK  L  D +V   L+D+Y + GR+E + ++F ++    +V WN 
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I    I G+  +AL L ++M              L E   R K + IT +++L  C   
Sbjct: 498 IIASLGIHGRGEEALQLFKDM--------------LAE---RVKADHITFVSLLSACSHS 540

Query: 518 SALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVI 571
             + +G++        Y I+  L         +VD+  + G L  A  +   MP++ +  
Sbjct: 541 GLVDEGQKCFDIMQKEYGIKPSLKH----YGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            W  ++ A  ++G  +     L  + ++  R  EV    V +  L +    +    EG+ 
Sbjct: 597 IWGALLSACKIYGNAE-----LGTLASD--RLLEVDSENVGYYVLLSNIYANTEKWEGVI 649

Query: 632 LFYKMKDDYGIEPSPDHYACVV 653
               +  D G+  +P   + VV
Sbjct: 650 KVRSLARDRGLRKTPGWSSVVV 671


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/835 (36%), Positives = 471/835 (56%), Gaps = 42/835 (5%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D QPDN  F  VL + +   D+  G+ +H  +    +   ++ V N L++MYGKC S + 
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTM-VGNALISMYGKCDS-LV 59

Query: 132 DVYKVFDRI--TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           D   VF+ +   +++ VSWN+MIA   + G    AL  +  M    +     T VSV  A
Sbjct: 60  DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           CS+L++      GR++H      G  ++F  + NAL+ MYA+ G V DAK +F+S + RD
Sbjct: 120 CSSLAQ------GREIHNRVFYSG-LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
             SWN ++ + SQ+  +  A+   ++M    +KP+  +  +V+   S  E+L  G++IHA
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHA 231

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
             + N    D   V +AL++MY  C      R VFD +  + +  WN MI  Y  N    
Sbjct: 232 EIVANGFDTD-LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFH 290

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           EAL L+ K+ ++ G      T  S++ AC   +A      +H H ++ GL  +  V  AL
Sbjct: 291 EALELYQKL-DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN- 486
           ++MY++ G +E ++ +F+ M+ RD V+W+T+I  Y   G   DA    +    +      
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409

Query: 487 ----------RNNVYDLDETVLRP-------KPNSITLMTVLPGCGALSALAKGKEIHAY 529
                     +N        + R        KP+++T + VL  C +L  L++ K +HA 
Sbjct: 410 SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
              + L ++VVV + L++MYA+CG L  A R+F     + V++W  ++ A+  +G   E 
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L+L + M  EG     VKP++VT+ ++   C+H G + +G   F  M + + + P+ DH+
Sbjct: 530 LDLFQEMDLEG-----VKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF 584

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           A +VDLLGR+G++ DA +L+  MP E D   AW + L ACRIH  +E+GE AA+ ++ L+
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPV-AWMTFLTACRIHGKLELGEAAAERVYELD 643

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
           P   + Y+ +SNIY++  +W+K   VRKKM+E G++K PG S+IE   ++H+F +G   H
Sbjct: 644 PSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYH 703

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT-P 828
            +++++   L  L   MR  GYVPDT  VLH+V+E EKET+L  HSEK+AIAFG++++  
Sbjct: 704 PRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRG 763

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF-KNGTCSCGDYW 882
            G  IRV KNLRVC+DCH ATKFI++I  R+II+RD  RFH F  +G CSCGDYW
Sbjct: 764 SGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 177/648 (27%), Positives = 303/648 (46%), Gaps = 87/648 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++    EA++ Y  M    +  D+  F +VL A +    L+ G++IH  V
Sbjct: 77  SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRV 133

Query: 104 VKYGYGLSSV-TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             +  GL S  ++AN LV MY + GS + D  ++F  +  +D+ SWN++I    + G W 
Sbjct: 134 --FYSGLDSFQSLANALVTMYARFGS-VGDAKRMFQSLQTRDETSWNAVILAHSQSGDWS 190

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL  F+ M   +V+P+S T ++V    S  S  + L  GR++H   +  G + +  +  
Sbjct: 191 GALRIFKEM-KCDVKPNSTTYINV---ISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT 246

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K G   +A+ +F   + RD+VSWN ++     N  F EA+   +++ + G K 
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKR 306

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--------- 332
              +  S+L ACS ++ L  G+ +H++ L    L     V +ALV+MY  C         
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERG-LDSEVAVATALVNMYAKCGSLEEARKV 365

Query: 333 -------------------------REVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
                                    ++    R+VFD +  +    WNAMIT Y QN    
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAV 425

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            A+ +F +M   AGL P+A T  +V+ AC       + + +H    +  L  +  V N L
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           ++MY+R G +E ++ +F   + +  VSW  M+  ++  G++ +AL L +EM         
Sbjct: 486 INMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM--------- 536

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-------KEIHAYAIRNMLATDVV 540
               DL+      KP+ +T  ++L  C    +L +G        E+HA      LA    
Sbjct: 537 ----DLEGV----KPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHA------LAPTAD 582

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
             +A+VD+  + G L  A+ + + MP   + + W   + A  +HG+    LEL +   A 
Sbjct: 583 HFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK----LELGE---AA 635

Query: 600 GSRGGEVKPNEVT-FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
             R  E+ P+    +IA+    +  GM  +   +  KM ++ G++  P
Sbjct: 636 AERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKM-EERGLKKLP 682


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/825 (35%), Positives = 463/825 (56%), Gaps = 59/825 (7%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
            EA+L + E  R+  +PD+     + + V   +++   KQ  A+  K              
Sbjct: 844  EAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------- 889

Query: 120  VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            + MY   GSD+               + WN  ++   + G+   A++ F  M+ S V   
Sbjct: 890  LFMYDDDGSDV---------------IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934

Query: 180  SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
              T V +    + L   + L LG+Q+HG  +R G +    + N L+ MY K G V  A++
Sbjct: 935  GLTFVVMLTVVAGL---NCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARS 991

Query: 239  LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            +F    + DL+SWNT++S  + +     +V     +    + PD  ++ASVL ACS LE 
Sbjct: 992  VFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEG 1051

Query: 299  -LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
                  +IHA A++  +++D SFV +AL+D+Y    ++E    +F       +A WNA++
Sbjct: 1052 GYYLATQIHACAMKAGVVLD-SFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 358  TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
             GY  +    +AL L+I M+E +G   +  T+ +   A          + IH   +K G 
Sbjct: 1111 HGYIVSGDFPKALRLYILMQE-SGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGF 1169

Query: 418  GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
              D +V + ++DMY + G +E ++ +F ++   D V+W TMI+G    GQ   AL    +
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQ 1229

Query: 478  MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
            M+                 + + +P+  T  T++  C  L+AL +G++IHA  ++   A 
Sbjct: 1230 MR-----------------LSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAF 1272

Query: 538  DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
            D  V ++LVDMYAKCG +  AR +F     R + +WN +I+    HG  +E L+  K M 
Sbjct: 1273 DPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMK 1332

Query: 598  AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            + G     V P+ VTFI + +ACSHSG+VSE  + FY M+ +YGIEP  +HY+C+VD L 
Sbjct: 1333 SRG-----VMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALS 1387

Query: 658  RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
            RAG++E+A ++I+ MP E   A  + +LL ACR+  + E G+  A+ L  LEP  ++ YV
Sbjct: 1388 RAGRIEEAEKVISSMPFE-ASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYV 1446

Query: 718  LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
            LLSN+Y++A  W+     R  M+++ V+K+PG SW++  +++H F+AGD SH++++ ++ 
Sbjct: 1447 LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYN 1506

Query: 778  FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
             +E + +R+R+EGYVPDT   L +V EE+KE  L  HSEKLAIA+G++ TPP TT+RV K
Sbjct: 1507 KVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIK 1566

Query: 838  NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            NLRVC DCH A K+ISK+  REI+LRD  RFHHF+NG CSCGDYW
Sbjct: 1567 NLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 160/524 (30%), Positives = 263/524 (50%), Gaps = 25/524 (4%)

Query: 45   WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
            W ++L    +  +  EA+  +++M  S +  D   F  +L  VAG+  L LGKQIH  V+
Sbjct: 903  WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962

Query: 105  KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            + G     V+V N L+NMY K GS +     VF ++ E D +SWN+MI+     G  + +
Sbjct: 963  RSGLD-QVVSVGNCLINMYVKAGS-VSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020

Query: 165  LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
            +  F  +L  ++ P  FT+ SV  ACS+L    G  L  Q+H  +++ G   ++F+  AL
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSSL--EGGYYLATQIHACAMKAGVVLDSFVSTAL 1078

Query: 224  MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            + +Y+K G++++A+ LF + +  DL SWN I+     +  F +A+     M   G + D 
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQ 1138

Query: 284  VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            +++ +   A   L  L  GK+IHA  ++    +D  FV S ++DMY  C E+E  RRVF 
Sbjct: 1139 ITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLD-LFVTSGVLDMYLKCGEMESARRVFS 1197

Query: 344  FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
             I       W  MI+G  +N  +E AL  + +M  ++ + P+  T +++V AC    A  
Sbjct: 1198 EIPSPDDVAWTTMISGCVENGQEEHALFTYHQM-RLSKVQPDEYTFATLVKACSLLTALE 1256

Query: 404  DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
                IH + +KL    D +V  +L+DMY++ G IE ++ +F     R   SWN MI G  
Sbjct: 1257 QGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVG-- 1314

Query: 464  ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
               QHG+A   L+  + M   K+R  +           P+ +T + VL  C     +++ 
Sbjct: 1315 -LAQHGNAKEALQFFKYM---KSRGVM-----------PDRVTFIGVLSACSHSGLVSEA 1359

Query: 524  KEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             E      +N  +  ++   S LVD  ++ G +  A +V   MP
Sbjct: 1360 YENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMP 1403



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 175/695 (25%), Positives = 301/695 (43%), Gaps = 113/695 (16%)

Query: 82   AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI- 140
            ++L+      DLSLGK+ HA ++  G+      V N L+ MY KCGS +    K+FD   
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRF-VTNNLITMYAKCGS-LSSARKLFDTTP 718

Query: 141  -TEKDQVSWNSMIATLCRFG-KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
             T +D V+WN++++ L     K       FR++  S V  +  TL  V   C   +    
Sbjct: 719  DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778

Query: 199  LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
                  +HG ++++G +W+ F+  AL+ +YAK G + +A+ LF     RD+V WN ++ +
Sbjct: 779  ---SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKA 835

Query: 258  LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR------ 311
                    EA++   +    G +PD V++ ++       + +   K+  AYA +      
Sbjct: 836  YVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDD 895

Query: 312  --NDILIDNSFVGSAL------------VDMY--------------------CNCREVEC 337
              +D+++ N  +   L            VDM                      NC  +E 
Sbjct: 896  DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNC--LEL 953

Query: 338  GRRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-------------- 379
            G+++   +     D+ +++ N +I  Y +      A  +F +M EV              
Sbjct: 954  GKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTL 1013

Query: 380  ----------------AGLWPNATTMSSVVPACVRSE-AFPDKEGIHGHAIKLGLGRDRY 422
                              L P+  T++SV+ AC   E  +     IH  A+K G+  D +
Sbjct: 1014 SGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSF 1073

Query: 423  VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            V  AL+D+YS+ G++E ++ +F + +  D  SWN ++ GY + G    AL L   MQ   
Sbjct: 1074 VSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESG 1133

Query: 483  EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            E                 + + ITL+      G L  L +GK+IHA  ++     D+ V 
Sbjct: 1134 E-----------------RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVT 1176

Query: 543  SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            S ++DMY KCG +  ARRVF  +P  + + W  +I     +G+ +  L     M     R
Sbjct: 1177 SGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM-----R 1231

Query: 603  GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM-KDDYGIEPSPDHYACVVDLLGRAGK 661
              +V+P+E TF  L  ACS    + +G  +   + K +   +P       +VD+  + G 
Sbjct: 1232 LSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGN 1289

Query: 662  VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
            +EDA  L         +  +W++++     H N +
Sbjct: 1290 IEDARGLFKRTNTR--RIASWNAMIVGLAQHGNAK 1322



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +     S  F +A+  YI M  S  + D        KA  G+  L  GKQIHA V
Sbjct: 1105 SWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVV 1164

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            VK G+ L  + V + +++MY KCG +M    +VF  I   D V+W +MI+     G+ + 
Sbjct: 1165 VKRGFNL-DLFVTSGVLDMYLKCG-EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEH 1222

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            AL  +  M  S V+P  +T  ++  ACS L+    L  GRQ+H N +++   ++ F+M +
Sbjct: 1223 ALFTYHQMRLSKVQPDEYTFATLVKACSLLT---ALEQGRQIHANIVKLNCAFDPFVMTS 1279

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYAK G ++DA+ LFK    R + SWN ++  L+Q+    EA+ F + M  RG+ PD
Sbjct: 1280 LVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPD 1339

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRV 341
             V+   VL ACSH  ++    E + Y+++ +  I+      S LVD       +E   +V
Sbjct: 1340 RVTFIGVLSACSHSGLVSEAYE-NFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKV 1398


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/695 (38%), Positives = 425/695 (61%), Gaps = 29/695 (4%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           S L +   L+  +Q+H   +  G   NTF+ N+LM  Y   G + DAK +F     +++V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SW  ++S L++ND F+EA+   R+M +   KP+ V+I+SVLPA ++L ++   K +H + 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           +R      N FV +ALVDMY     +   R++F+ +S++ +  WNA+++GY  + + EEA
Sbjct: 149 VRGG-FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEA 207

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           + LF  M    GL  +  T+ S++PA +         GIHG  I+ G   D++++ ALMD
Sbjct: 208 IDLFNLMRR-KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMD 266

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           +Y     ++ +  +F +M V+D  +W  M+TG++  G+H D     R +++  +     N
Sbjct: 267 IYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFS-SGRHWD-----RAIKHFNKMLGIQN 320

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
           +          K +SI LM +L  C    AL +G+ +HA AI+   A ++ VGSA++DMY
Sbjct: 321 L----------KLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMY 370

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           A CG L  A+R F  M  ++V+ WN +I   GM+G G + ++L   M     +G  + P+
Sbjct: 371 ANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM-----KGSGLDPD 425

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           E TF+++  ACSH+GMV EG+ +FY M       P+  HYACV+D+LGRAG+++ AY  I
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFI 485

Query: 670 NMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           N MP  P+FD    +S+LLGACRIH N+++G   +Q +F +EP+ A +YVLLSN+Y+ A 
Sbjct: 486 NNMPFQPDFD---VYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAG 542

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+     R  ++   ++K+PG S IE   EI+ F+AG+  H Q  ++ G L+ L  +++
Sbjct: 543 NWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           K GYVP+T+ +L +V+++ K+ +L  HSEK+AIAFG++ T PGT IR+ KNLR CNDCH 
Sbjct: 603 KAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHS 662

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A+KF+SK+  R ++++D  RFH F++G CSC DYW
Sbjct: 663 ASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 263/532 (49%), Gaps = 33/532 (6%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           ++DL   +QIHA ++  G   ++  ++N+L+N Y  CG  + D  ++F     K+ VSW 
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGL-LADAKQIFHHTPCKNVVSWT 91

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
            +I+ L +   +  A++ FR M   N +P++ T+ SV  A +NL     +R+ + VH   
Sbjct: 92  ILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGL---IRIAKSVHCFW 148

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +R G E N F+  AL+ MY+K G +  A+ LF+S  +R++VSWN IVS  S +    EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAI 208

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M  +G+  D  +I S++PA   +  L  G  IH + +R     D   + +AL+D+
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH-IKTALMDI 267

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y +   V+   RVF  +  K +A W  M+TG+    + + A+  F KM  +  L  ++  
Sbjct: 268 YVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIV 327

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +  ++ +C  S A      +H  AIK     + +V +A++DMY+  G +E +K  F  M 
Sbjct: 328 LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG 387

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D V WN MI G  + G   DA+ L  +M+             LD       P+  T +
Sbjct: 388 EKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGS----------GLD-------PDESTFV 430

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +VL  C     + +G +I  + ++      ++   + ++D+  + G L+ A    + MP 
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490

Query: 568 R-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           + +   ++ ++ A  +HG  +   E+ + +        E++PN+  +  L +
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIF-------EMEPNDAGYYVLLS 535



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 226/438 (51%), Gaps = 14/438 (3%)

Query: 38  QTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            T CK   SW   +   A+++ F EAI  + EMT  + +P+     +VL A A +  + +
Sbjct: 81  HTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRI 140

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K +H   V+ G+   +V V   LV+MY K G  M    ++F+ ++E++ VSWN++++  
Sbjct: 141 AKSVHCFWVRGGFE-GNVFVETALVDMYSKFGC-MGVARQLFESMSERNVVSWNAIVSGY 198

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G  + A++ F +M    +    +T++S+  A  ++     L++G  +HG  +R G E
Sbjct: 199 SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVG---CLQVGTGIHGFIIRTGYE 255

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM-FLRQ 273
            +  I  ALM +Y     VDDA  +F     +D+ +W  +++  S    +  A+  F + 
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           + ++ +K D + +  +L +CSH   L  G+ +HA A++     +N FVGSA++DMY NC 
Sbjct: 316 LGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCG 374

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E  +R F  + +K +  WNAMI G G N Y  +A+ LF++M+  +GL P+ +T  SV+
Sbjct: 375 NLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVL 433

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEVRDT 452
            AC  +    +   I  H +K           A ++D+  R G+++ + +  ++M  +  
Sbjct: 434 YACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPD 493

Query: 453 VSWNTMITGYTICGQHGD 470
               + + G   C  HG+
Sbjct: 494 FDVYSTLLG--ACRIHGN 509


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 304/831 (36%), Positives = 442/831 (53%), Gaps = 84/831 (10%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +S  ++   +V  Y  CG+  + +  V +R+T    V WN +I    + G+ D A+    
Sbjct: 48  ISPRSLGTGVVASYLACGATDYALL-VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            ML +      FTL  V  AC  L      R G   HG     G E N FI NAL+AMY+
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELP---SYRCGSAFHGLICCNGFESNVFICNALVAMYS 163

Query: 229 KLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL------RGI 279
           + G +++A  +F     R   D++SWN+IVS+  ++     A+    +M L         
Sbjct: 164 RCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNE 223

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           + D +SI ++LPAC  L+ +   KE+H  A+RN   +D  FVG+AL+D Y  C  +E   
Sbjct: 224 RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD-VFVGNALIDAYAKCGLMENAV 282

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE--------------------- 378
           +VF+ +  K +  WNAM+ GY Q+   + A  LF  M +                     
Sbjct: 283 KVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRG 342

Query: 379 -------------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL---------- 415
                         +G  PN  T+ SV+ AC    AF     IH +++K           
Sbjct: 343 CSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFG 402

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVRDTVSWNTMITGYTICGQHGDALM 473
           G   D  V NAL+DMYS+    + +++IFDD  +E R+ V+W  MI G+   G   DAL 
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 462

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  EM +          Y +        PN+ T+  +L  C  L+A+  GK+IHAY +R+
Sbjct: 463 LFVEMIS--------EPYGV-------APNAYTISCILMACAHLAAIRIGKQIHAYVLRH 507

Query: 534 ML--ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
               ++   V + L++MY+KCG ++ AR VFD M  ++ I+W  ++  YGMHG G E L+
Sbjct: 508 HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 567

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           +   M     R     P+++TF+ +  ACSH GMV +G+  F  M  DYG+ P  +HYA 
Sbjct: 568 IFDKM-----RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY 622

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
            +DLL R G+++ A++ +  MP E   A  W +LL ACR+H NVE+ E A   L  +  +
Sbjct: 623 AIDLLARFGRLDKAWKTVKDMPME-PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 681

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
               Y L+SNIY++A  W     +R  MK+ G++K PGCSW++       F  GD SH  
Sbjct: 682 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPL 741

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           S Q++  LE+L +R++  GYVP+T+  LH+V+EEEK  LL  HSEKLA+A+G+L T PG 
Sbjct: 742 SPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGC 801

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IR+ KNLRVC DCH A  +ISKI   EI++RD  RFHHFKNG+CSCG YW
Sbjct: 802 PIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 290/619 (46%), Gaps = 86/619 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R   +  +   AI     M R+  + D+F  P VLKA   +     G   H  + 
Sbjct: 85  WNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLIC 144

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
             G+  S+V + N LV MY +CGS + +   +FD IT++   D +SWNS+++   +    
Sbjct: 145 CNGFE-SNVFICNALVAMYSRCGS-LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 202

Query: 162 DLALEAF-RMMLYSNVEPSS-----FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
             AL+ F +M L  + +P++      ++V++  AC +L     +   ++VHGN++R G +
Sbjct: 203 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK---AVPQTKEVHGNAIRNGTF 259

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL--------- 265
            + F+ NAL+  YAK G +++A  +F   E +D+VSWN +V+  SQ+  F          
Sbjct: 260 LDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNM 319

Query: 266 --------------------------EAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                                     EA+   RQM   G  P+ V+I SVL AC+ L   
Sbjct: 320 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 379

Query: 300 DTGKEIHAYALRNDIL-IDNSFVG--------SALVDMYCNCREVECGRRVFDFI--SDK 348
             G EIHAY+L+N +L +DN F G        +AL+DMY  CR  +  R +FD I   ++
Sbjct: 380 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 439

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
            +  W  MI G+ Q     +AL LF++M  E  G+ PNA T+S ++ AC    A    + 
Sbjct: 440 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 499

Query: 408 IHGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           IH + ++         +V N L++MYS+ G ++ ++ +FD M  +  +SW +M+TGY + 
Sbjct: 500 IHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 559

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-K 524
           G+  +AL +  +M+                      P+ IT + VL  C     + +G  
Sbjct: 560 GRGSEALDIFDKMRKAGF-----------------VPDDITFLVVLYACSHCGMVDQGLS 602

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
              + +    L       +  +D+ A+ G L+ A +    MP+    + W  ++ A  +H
Sbjct: 603 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 662

Query: 584 GE---GQEVLELLKNMVAE 599
                 +  L  L  M AE
Sbjct: 663 SNVELAEHALNKLVEMNAE 681



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 20/275 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   ++     EA+  + +M  S   P+     +VL A A +   S G +IHA+ 
Sbjct: 330 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 389

Query: 104 VK---------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMI 152
           +K         +G     + V N L++MY KC S       +FD I   E++ V+W  MI
Sbjct: 390 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS-FKAARSIFDDIPLEERNVVTWTVMI 448

Query: 153 ATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
               ++G  + AL+ F  M+     V P+++T+  + +AC++L+    +R+G+Q+H   L
Sbjct: 449 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA---AIRIGKQIHAYVL 505

Query: 211 RVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           R  ++++   F+ N L+ MY+K G VD A+ +F S   +  +SW ++++    + +  EA
Sbjct: 506 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 565

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +    +M   G  PD ++   VL ACSH  M+D G
Sbjct: 566 LDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/724 (39%), Positives = 419/724 (57%), Gaps = 59/724 (8%)

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLV 249
           LS+   +R  +Q+H + ++ G  NT F ++ L+   A  + G +  A +LF S E+ +L 
Sbjct: 36  LSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLF 95

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
            WN+++  LS +     A++F  +M   G++P+  +   +L +C+ L     GK+IHA+ 
Sbjct: 96  IWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHV 155

Query: 310 LRNDILIDNSFVGSALVDMYCNCREV-------------------------------ECG 338
           L+   + D  F+ ++L++MY    E+                               +  
Sbjct: 156 LKLGFVSD-VFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRA 214

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R++FD +  K +  WNAMI GY Q    +EAL+LF  M + A + PN +T+ SV+ AC +
Sbjct: 215 RQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK-ANVPPNESTIVSVLSACAQ 273

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S A      +       GL  +  + NAL+DMYS+ G ++ ++ +FDDM  RD +SWN M
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVM 333

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I GYT    + +AL L REM     E                 P  IT +++LP C  L 
Sbjct: 334 IGGYTHMCSYKEALALFREMLASGVE-----------------PTEITFLSILPSCAHLG 376

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           A+  GK IHAY  +N  +    + ++L+D+YAKCG +  AR+VFD M ++++ +WN +I 
Sbjct: 377 AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
              MHG+  +  EL   M ++G     ++PNE+TF+ + +AC H+G+V  G   F  M  
Sbjct: 437 GLAMHGQADKAFELFSKMSSDG-----IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           DY I P   HY C++DLLGRAG  E+A  L+  M  + D A  W SLLGACR H  VE+G
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGA-IWGSLLGACRDHGRVELG 550

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E+ A+ LF LEPD    YVLLSNIY+ A  WD    +R ++ + G++K PGC+ IE  + 
Sbjct: 551 ELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNV 610

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H+FL GD  H QSE ++  LE + E+++  G+V DTS VL++++EE KE  L  HSEKL
Sbjct: 611 VHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKL 670

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIAFG+++T PGT IR+ KNLRVC +CH ATK ISKI +REII RD  RFHHFK+G+CSC
Sbjct: 671 AIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSC 730

Query: 879 GDYW 882
            DYW
Sbjct: 731 NDYW 734



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 231/467 (49%), Gaps = 60/467 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S     A++ ++ M  S ++P+++ FP +LK+ A +     GKQIHAHV+
Sbjct: 97  WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVL 156

Query: 105 KYGYGLSSVTVANTLVNMYGKCGS--------------------------DMWD----VY 134
           K G+ +S V +  +L+NMY + G                            +W       
Sbjct: 157 KLGF-VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRAR 215

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD +  KD VSWN+MIA   + G+   AL  F  M  +NV P+  T+VSV  AC   +
Sbjct: 216 QLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC---A 272

Query: 195 RRDGLRLGRQVHGNSLRVGEW--------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           + + L L     GNS+R   W        N  ++NAL+ MY+K G +  A+ LF    +R
Sbjct: 273 QSNALDL-----GNSMR--SWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER 325

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D++SWN ++   +    + EA+   R+M   G++P  ++  S+LP+C+HL  +D GK IH
Sbjct: 326 DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIH 385

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           AY  +N     ++ + ++L+D+Y  C  +   R+VFD +  K +A WNAMI G   +   
Sbjct: 386 AYINKN-FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQA 444

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYV 423
           ++A  LF KM    G+ PN  T   ++ AC  +      +      +   K+      Y 
Sbjct: 445 DKAFELFSKMSS-DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY- 502

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
              ++D+  R G  E ++++  +MEV+ D   W +++     C  HG
Sbjct: 503 -GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA---CRDHG 545



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 164/618 (26%), Positives = 275/618 (44%), Gaps = 96/618 (15%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           LK ++  Q +   KQIHAH++K G   +   ++  +         D+     +F+ I E 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           +   WNSMI  L       LAL  F  M+YS VEP+S+T   +  +C+ L+       G+
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA---SAHEGK 149

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF--KSFED--------------- 245
           Q+H + L++G   + FI  +L+ MYA+ G +++A+ +F   +F D               
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209

Query: 246 --------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
                         +D+VSWN +++  +Q  +  EA++    M    + P+  +I SVL 
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           AC+    LD G  + ++ + +  L  N  + +AL+DMY  C +++  R +FD + ++ + 
Sbjct: 270 ACAQSNALDLGNSMRSW-IEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVI 328

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            WN MI GY      +EAL LF +M   +G+ P   T  S++P+C    A    + IH +
Sbjct: 329 SWNVMIGGYTHMCSYKEALALFREM-LASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
             K        +  +L+D+Y++ G I  ++ +FD M+++   SWN MI G  + GQ   A
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKA 447

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             L  +M +   E                 PN IT + +L  C            HA   
Sbjct: 448 FELFSKMSSDGIE-----------------PNEITFVGILSACK-----------HA--- 476

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
                        LVD+    G   F+  V D         +  +I   G  G  +E   
Sbjct: 477 ------------GLVDL----GQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP-SPDHYA 650
           LL+NM        EVKP+   + +L  AC   G V  G  +  ++   + +EP +P  Y 
Sbjct: 521 LLQNM--------EVKPDGAIWGSLLGACRDHGRVELGELVAERL---FELEPDNPGAYV 569

Query: 651 CVVDLLGRAGKVEDAYQL 668
            + ++   AGK +D  ++
Sbjct: 570 LLSNIYAGAGKWDDVARI 587



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 140/263 (53%), Gaps = 6/263 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+  + +EA+L + +M ++++ P+     +VL A A    L LG  + + +
Sbjct: 228 SWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWI 287

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G   S++ + N L++MY KCG D+    ++FD + E+D +SWN MI        +  
Sbjct: 288 EDRGL-CSNLKLVNALIDMYSKCG-DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNA 222
           AL  FR ML S VEP+  T +S+  +C++L   D   LG+ +H   +      +T +  +
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAID---LGKWIHAYINKNFNSVSTSLSTS 402

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G +  A+ +F   + + L SWN ++  L+ + +  +A     +M+  GI+P+
Sbjct: 403 LIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPN 462

Query: 283 GVSIASVLPACSHLEMLDTGKEI 305
            ++   +L AC H  ++D G++ 
Sbjct: 463 EITFVGILSACKHAGLVDLGQQF 485


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 286/794 (36%), Positives = 448/794 (56%), Gaps = 38/794 (4%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           QDL   +QIH  +   G   ++V + N +V  YGKCGS +      FD I  K+  SW S
Sbjct: 38  QDLESVRQIHDRIS--GAASANVFLGNEIVRAYGKCGS-VASARAAFDAIARKNDYSWGS 94

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--N 208
           M+    + G +  AL+ ++ M   +++P+     +V  AC+++     L  G+ +H   +
Sbjct: 95  MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIK---ALEEGKAIHSRIS 148

Query: 209 SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
             +  + +  + N+L+ MYAK G ++DAK LF+    R + SWN ++++ +Q+  F EA+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M    ++P   +  SVL ACS+L +LD G++IHA        +D S + +AL+ M
Sbjct: 209 RLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS-LQNALLTM 264

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C+ ++   ++F  +  + +  W+AMI  + + +  +EA+  + KM+ + G+ PN  T
Sbjct: 265 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ-LEGVRPNYYT 323

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            +SV+ AC           +H   +  G         AL+D+Y+  G ++ ++++FD +E
Sbjct: 324 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            RD   W  +I GY+  G     L L REM+N  +      +Y                 
Sbjct: 384 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYS---------------- 427

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
            V+  C +L A A  ++ H+    + + +D V+ ++LV+MY++ G L  AR+VFD M  R
Sbjct: 428 CVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR 487

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + + W  +I  Y  HGE    L L K M  EG+     +P+E+TF+ +  ACSH+G+  +
Sbjct: 488 DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA-----EPSELTFMVVLYACSHAGLQEQ 542

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G  LF  ++ DY + P+  HY+C++DLL RAG++ DA +LIN MP E +    WSSLLGA
Sbjct: 543 GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV-TWSSLLGA 601

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
            RIH++V+    AA  +  L+P   + YVLLSN+++          VR  M   GV+K  
Sbjct: 602 SRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRR 661

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE  D+IH+F  GD SH + +++   L+ LS ++++ GYVP++  VLH+V E+EKE
Sbjct: 662 GSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKE 721

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            LL  HSEKLAIAFG++ T PGTT+R+   LR+C+DCH A KFIS I  REII+RD  RF
Sbjct: 722 LLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRF 781

Query: 869 HHFKNGTCSCGDYW 882
           H F++G CSCGDYW
Sbjct: 782 HKFRDGQCSCGDYW 795



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 176/544 (32%), Positives = 284/544 (52%), Gaps = 33/544 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + A++  +R A+  Y  M   D+QP+   +  VL A A I+ L  GK IH+ +
Sbjct: 91  SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRI 147

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                    V + N+L+ MY KCGS + D  ++F+R++ +   SWN+MIA   + G ++ 
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGS-LEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFE- 205

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRVGEWNTFIMNA 222
             EA R+    +VEPS  T  SV  ACSNL   D    GR++H   S R  E +  + NA
Sbjct: 206 --EAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQ---GRKIHALISSRGTELDLSLQNA 260

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYA+   +DDA  +F+    RD+VSW+ ++++ ++ D F EA+ F  +M L G++P+
Sbjct: 261 LLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 320

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + ASVL AC+ +  L  G+ +H   L N   I     G+ALVD+Y +   ++  R +F
Sbjct: 321 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKI-TLVNGTALVDLYTSYGSLDEARSLF 379

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D I ++   LW  +I GY +  +    L L+ +M+    +       S V+ AC    AF
Sbjct: 380 DQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 439

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            D    H      G+  D  +  +L++MYSR G +E ++ +FD M  RDT++W T+I GY
Sbjct: 440 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGY 499

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G+HG AL L +EM+    E                 P+ +T M VL  C       +
Sbjct: 500 AKHGEHGLALGLYKEMELEGAE-----------------PSELTFMVVLYACSHAGLQEQ 542

Query: 523 GKEIHAYAIRNMLAT--DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           GK++   +I++  A   ++   S ++D+ ++ G L+ A  + + MPV  N +TW+ ++ A
Sbjct: 543 GKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 601

Query: 580 YGMH 583
             +H
Sbjct: 602 SRIH 605



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 214/434 (49%), Gaps = 24/434 (5%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   + + A+S  F EAI  Y +M   D++P    F +VL A + +  L  G++I
Sbjct: 186 RSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKI 242

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA +   G  L  +++ N L+ MY +C   + D  K+F R+  +D VSW++MIA      
Sbjct: 243 HALISSRGTEL-DLSLQNALLTMYARCKC-LDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
            +D A+E +  M    V P+ +T  SV LAC+++     LR GR VH   L  G   T +
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG---DLRAGRAVHDQILGNGYKITLV 357

Query: 220 M-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
              AL+ +Y   G +D+A++LF   E+RD   W  ++   S+       +   R+M    
Sbjct: 358 NGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTT 417

Query: 279 IKPDGVSIAS-VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             P    I S V+ AC+ L      ++ H+  +  D +I +  + ++LV+MY     +E 
Sbjct: 418 KVPATKIIYSCVISACASLGAFADARQAHS-DIEADGMISDFVLATSLVNMYSRWGNLES 476

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R+VFD +S +    W  +I GY ++     AL L+ +M E+ G  P+  T   V+ AC 
Sbjct: 477 ARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEM-ELEGAEPSELTFMVVLYAC- 534

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR- 450
            S A   ++   G  + + +  D  +       + ++D+ SR GR+  ++ + + M V  
Sbjct: 535 -SHAGLQEQ---GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 590

Query: 451 DTVSWNTMITGYTI 464
           + V+W++++    I
Sbjct: 591 NDVTWSSLLGASRI 604


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 305/788 (38%), Positives = 431/788 (54%), Gaps = 82/788 (10%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN +I      G  +  L+ +R M      P  +T   V  AC  +      R G  VH 
Sbjct: 94  WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP---SFRCGASVHA 150

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDK 263
                G EWN F+ N L++MY + G  ++A+ +F    +R   DLVSWN+IV++  Q   
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 210

Query: 264 FLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            + A+ MF R     GI+PD VS+ +VLPAC+ +     GK++H YALR+  L ++ FVG
Sbjct: 211 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSG-LFEDVFVG 269

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE---- 378
           +A+VDMY  C  +E   +VF+ +  K +  WNAM+TGY Q    ++AL LF K+ E    
Sbjct: 270 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 329

Query: 379 ------------------------------VAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
                                         + G  PN  T+ S++  C  +      +  
Sbjct: 330 LNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKET 389

Query: 409 HGHAIKLGL-------GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD--TVSWNTMI 459
           H HAIK  L       G D  V NAL+DMYS+    + ++ +FD +  +D   V+W  +I
Sbjct: 390 HCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLI 449

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK----PNSITLMTVLPGCG 515
            G     QHG+A                N   +L   +L+P     PN+ T+   L  C 
Sbjct: 450 GGNA---QHGEA----------------NEALELFSQMLQPDNFVMPNAFTISCALMACA 490

Query: 516 ALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            L AL  G++IHAY +RN   + ++ V + L+DMY+K G ++ AR VFD M  RN ++W 
Sbjct: 491 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 550

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++  YGMHG G+E L++   M   G     + P+ VTF+ +  ACSHSGMV +G++ F 
Sbjct: 551 SLMTGYGMHGRGEEALQIFYEMQKVG-----LVPDGVTFVVVLYACSHSGMVDQGINYFN 605

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M  D+G+ P  +HYAC+VDLL RAG++++A +LI  MP +   A  W +LL ACR++ N
Sbjct: 606 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPA-VWVALLSACRVYAN 664

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           VE+GE AA  L  LE      Y LLSNIY++A+ W     +R  MK  G++K PGCSW++
Sbjct: 665 VELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 724

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
                  F AGD SH  S+Q++  L +L +R++  GYVPD    LH+V++EEK  LL  H
Sbjct: 725 GRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEH 784

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLA+A+GIL T PG  IR+ KNLR C DCH A  +IS I   EII+RD  RFHHFKNG
Sbjct: 785 SEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNG 844

Query: 875 TCSCGDYW 882
           +CSC  YW
Sbjct: 845 SCSCRGYW 852



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 182/619 (29%), Positives = 298/619 (48%), Gaps = 95/619 (15%)

Query: 12  PSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRS 71
           P+  +S   T   PA   + L      +     W + +R         + +  Y  M R 
Sbjct: 61  PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRL 120

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
             +PD++ FP VLKA   I     G  +HA V   G+   +V V N LV+MYG+CG+  W
Sbjct: 121 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEW-NVFVGNGLVSMYGRCGA--W 177

Query: 132 D-VYKVFDRITEK---DQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSV 186
           +   +VFD + E+   D VSWNS++A   + G    A++ F RM     + P + +LV+V
Sbjct: 178 ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNV 237

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+++        G+QVHG +LR G + + F+ NA++ MYAK G +++A  +F+  + 
Sbjct: 238 LPACASVG---AWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 294

Query: 246 RDLVSWNTIVSSLSQNDKF-----------------------------------LEAVMF 270
           +D+VSWN +V+  SQ  +F                                    EA+  
Sbjct: 295 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 354

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS------FVGSA 324
            RQM L G +P+ V++ S+L  C+    L  GKE H +A++  + +D +       V +A
Sbjct: 355 FRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 414

Query: 325 LVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG- 381
           L+DMY  C+  +  R +FD I   D+ +  W  +I G  Q+    EAL LF +M +    
Sbjct: 415 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 474

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR------YVQNALMDMYSRMG 435
           + PNA T+S  + AC R  A      IH + +     R+R      +V N L+DMYS+ G
Sbjct: 475 VMPNAFTISCALMACARLGALRFGRQIHAYVL-----RNRFESAMLFVANCLIDMYSKSG 529

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++ ++ +FD+M  R+ VSW +++TGY + G+  +AL +  EMQ +              
Sbjct: 530 DVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGL------------ 577

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD--VVVG----SALVDMY 549
                 P+ +T + VL  C     + +G  I+ +   N +  D  VV G    + +VD+ 
Sbjct: 578 -----VPDGVTFVVVLYACSHSGMVDQG--INYF---NGMNKDFGVVPGAEHYACMVDLL 627

Query: 550 AKCGCLNFARRVFDLMPVR 568
           ++ G L+ A  +   MP++
Sbjct: 628 SRAGRLDEAMELIRGMPMK 646


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 310/838 (36%), Positives = 462/838 (55%), Gaps = 71/838 (8%)

Query: 56   NQFR-EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ-DLSLGKQIHAHVVKYGYGLSSV 113
            N F+ EA+  +    RS   PD   F  +   + G+  D+S  ++ HA  VK  Y +   
Sbjct: 796  NSFQDEALRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK-AYAM--- 848

Query: 114  TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
                                 K+F      +  +WN  +      G+   A++ F+ +L 
Sbjct: 849  ---------------------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887

Query: 174  SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-----IMNALMAMYA 228
            S +   S TLV +  A       D L LG Q+H   ++    ++F     + N+LM MY+
Sbjct: 888  STIGHDSVTLVIILSAAVGA---DDLDLGEQIHALVIK----SSFAPVVPVSNSLMNMYS 940

Query: 229  KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
            K G V  A+  F +  + DL+SWNT++SS +QN+  +EA+   R +   G+KPD  ++AS
Sbjct: 941  KAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000

Query: 289  VLPACS---HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
            VL ACS     E    G ++H YA++  I I++SFV +AL+D+Y    +++    +    
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGI-INDSFVSTALIDLYSKGGKMDEAEFLLHGK 1059

Query: 346  SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             D  +A WNA++ GY ++    +AL  F  M E+ G+  +  T+++ + A          
Sbjct: 1060 YDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM-GIPIDEITLATAIKASGCLINLKQG 1118

Query: 406  EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
            + I  +AIKLG   D +V + ++DMY + G +  +  +F ++   D V+W TMI+GY   
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178

Query: 466  GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            G    AL +   M+                 V   +P+  T  T++     L+AL +GK+
Sbjct: 1179 GDEDHALSVYHLMR-----------------VSGVQPDEYTFATLIKASSCLTALEQGKQ 1221

Query: 526  IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            IHA  ++   + D  VG++LVDMY KCG +  A RVF  M VR V+ WN +++    HG 
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281

Query: 586  GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
              E L L + M + G     ++P++VTFI + +ACSHSG+ SE    F  M   YGI P 
Sbjct: 1282 VDEALNLFRTMQSNG-----IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPE 1336

Query: 646  PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             +HY+C+VD LGRAG++++A  +I  MP +   A  + +LLGACR   + E  +  A  L
Sbjct: 1337 IEHYSCLVDALGRAGRIQEAENVIASMPFK-ASASMYRALLGACRTKGDAETAKRVADKL 1395

Query: 706  FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
              L+P  +S YVLLSNIY++++ WD   D R  MK   V+K+PG SWI+  +++H F+  
Sbjct: 1396 LALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVD 1455

Query: 766  DGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D SH Q+  ++  +E+L +R+R+EG YVPDT   L +V EEEKE  L  HSEKLAIAFG+
Sbjct: 1456 DRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGL 1515

Query: 825  LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ++TPP  TIRV KNLRVC DCH A K ISK+  REI+LRD  RFHHF+NGTCSCGDYW
Sbjct: 1516 ISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 267/544 (49%), Gaps = 37/544 (6%)

Query: 34   LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
             P  Q     +W + L     + Q   AI  +  + RS I  D+     +L A  G  DL
Sbjct: 851  FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910

Query: 94   SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             LG+QIHA V+K  +    V V+N+L+NMY K G  ++   K F    E D +SWN+MI+
Sbjct: 911  DLGEQIHALVIKSSFA-PVVPVSNSLMNMYSKAGV-VYAAEKTFINSPELDLISWNTMIS 968

Query: 154  TLCRFGKWDLALEA---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
            +   + + +L +EA   FR +L   ++P  FTL SV  ACS     +   LG QVH  ++
Sbjct: 969  S---YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025

Query: 211  RVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            + G  N +F+  AL+ +Y+K G++D+A+ L     D DL SWN I+    +++K  +A+ 
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085

Query: 270  FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSAL 325
                M   GI  D +++A+ + A   L  L  GK+I AYA++    ND+     +V S +
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL-----WVSSGV 1140

Query: 326  VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            +DMY  C ++     +F  IS      W  MI+GY +N  ++ AL ++  M  V+G+ P+
Sbjct: 1141 LDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM-RVSGVQPD 1199

Query: 386  ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
              T ++++ A     A    + IH + +KL    D +V  +L+DMY + G ++ +  +F 
Sbjct: 1200 EYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFR 1259

Query: 446  DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
             M+VR  V WN M+ G    G   +AL L R MQ+       N +          +P+ +
Sbjct: 1260 KMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS-------NGI----------QPDKV 1302

Query: 506  TLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T + VL  C      ++  K   A      +  ++   S LVD   + G +  A  V   
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362

Query: 565  MPVR 568
            MP +
Sbjct: 1363 MPFK 1366



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 227/513 (44%), Gaps = 52/513 (10%)

Query: 85   KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
            ++   + DL LGK+ HA +V  G  L    + N L+ MY KCGS +    +VFD+ +++D
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSG-DLPDRYLTNNLITMYSKCGS-LCSARQVFDKSSDRD 676

Query: 145  QVSWNSMIATLCRFG--KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
             V+WNS++A   +F    ++  LE FR+         S T +++A           +++ 
Sbjct: 677  LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736

Query: 203  RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
              VHG ++++G E + F+  AL+ +Y K G V  A+ LF    +RD V WN ++ +  +N
Sbjct: 737  ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796

Query: 262  DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                EA+ F       G  PD  ++  V+                     N  + +N   
Sbjct: 797  SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGV------------------NSDVSNNRKR 838

Query: 322  GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
             +  V  Y          ++F F     I  WN  +T +        A+  F  +   + 
Sbjct: 839  HAEQVKAYA--------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-ST 889

Query: 382  LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            +  ++ T+  ++ A V ++     E IH   IK        V N+LM+MYS+ G +  ++
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 442  TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
              F +    D +SWNTMI+ Y       +A+   R++        R+ +          K
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL-------RDGL----------K 992

Query: 502  PNSITLMTVLPGCGALSA---LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
            P+  TL +VL  C           G ++H YAI+  +  D  V +AL+D+Y+K G ++ A
Sbjct: 993  PDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052

Query: 559  RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
              +       ++ +WN I+  Y    + ++ LE
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 237/503 (47%), Gaps = 73/503 (14%)

Query: 199  LRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            L+LG++ H   +  G+  + ++ N L+ MY+K G +  A+ +F    DRDLV+WN+I+++
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 258  LSQ-NDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTG-----KEIHAYAL 310
             +Q  D   E V  L    L G+ +  G SI  +  A      L +G     + +H YA+
Sbjct: 687  YAQFADSSYENV--LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 311  RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
            +    +D  FV  ALV++YC    V   R +FD + ++   LWN M+  Y +N + +EAL
Sbjct: 745  KIGFELD-LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 371  MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
              F      +G  P+ + +  V+   V S+   +++    HA          V+   M M
Sbjct: 804  RFFSAFHR-SGFXPDFSNLHCVI-GGVNSDVSNNRK---RHA--------EQVKAYAMKM 850

Query: 431  YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            +            FD  +  +  +WN  +T +   GQ   A+                  
Sbjct: 851  FP-----------FD--QGSNIFAWNKKLTEFLHAGQIVAAI------------------ 879

Query: 491  YDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
             D  +T+LR     +S+TL+ +L        L  G++IHA  I++  A  V V ++L++M
Sbjct: 880  -DCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNM 938

Query: 549  YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
            Y+K G +  A + F   P  ++I+WN +I +Y  +    E +   ++++ +G     +KP
Sbjct: 939  YSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDG-----LKP 993

Query: 609  NEVTFIALFAACSHSGMVSEGMDL-----FYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
            ++ T  ++  ACS +G   E   L      Y +K   GI         ++DL  + GK++
Sbjct: 994  DQFTLASVLRACS-TGDEGEYFTLGSQVHVYAIK--CGIINDSFVSTALIDLYSKGGKMD 1050

Query: 664  DAYQLINMMPPEFDKAGAWSSLL 686
            +A  L++    +FD A +W++++
Sbjct: 1051 EAEFLLH-GKYDFDLA-SWNAIM 1071


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/696 (40%), Positives = 419/696 (60%), Gaps = 40/696 (5%)

Query: 196 RDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R  L  GR VH      G  +  I + AL  MY K  R  DA+ +F     RD V+WN +
Sbjct: 29  RADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAV 88

Query: 255 VSSLSQN---DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           V+  ++N      +EAV+ + Q    G +PD V++ SVLPAC+    L   +E+HA+ALR
Sbjct: 89  VAGYARNGLPSSAMEAVVRM-QGEEGGERPDSVTLVSVLPACADARALHACREVHAFALR 147

Query: 312 N--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
              D L++   V +A++D YC C  VE  R VFD +  +    WNAMI GY  N    EA
Sbjct: 148 AGLDELVN---VSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEA 204

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           + LF +M +      +A+ ++++  AC       +   +H   +++GL  +  V NAL+ 
Sbjct: 205 MALFWRMVQEGVDVTDASVLAAL-QACGELGYLDEVRRVHELLVRVGLSSNVSVTNALIT 263

Query: 430 MYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTI--CGQHGDALMLLREMQNMEEEKN 486
            Y++  R +++  +F+++  + T +SWN MI G+T   C +  + L    +++N+     
Sbjct: 264 TYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENV----- 318

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                         +P+S TL++V+P    +S   + + IH Y+IR+ L  DV V +AL+
Sbjct: 319 --------------RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALI 364

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMY+KCG ++ ARR+FD    R+VITWN +I  YG HG GQ  +EL + M   GS     
Sbjct: 365 DMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL---- 420

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
            PNE TF+++ AACSH+G+V EG   F  MK DYG+EP  +HY  +VDLLGRAGK+++A+
Sbjct: 421 -PNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAW 479

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
             I  MP E      + ++LGAC++H+NVE+ E +AQ +F L P+   ++VLL+NIY++A
Sbjct: 480 SFIKNMPIE-PGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANA 538

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
            +W     VR  M++ G++K PG S I+  +E+H F +G  +HQ ++ ++  L  L E +
Sbjct: 539 SMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEI 598

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           +  GYVPDT  + H+V ++ K  LL  HSEKLAIA+G++ T PGTTI++ KNLRVCNDCH
Sbjct: 599 KDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCH 657

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ATK IS +  REII+RD++RFHHFK+G CSCGDYW
Sbjct: 658 NATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 32/511 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVFD 138
           F A+LK  A   DL+ G+ +HA +     GL+S ++A+T L NMY KC     D  +VFD
Sbjct: 19  FTALLKLCAARADLATGRAVHAQL--EARGLASESIASTALANMYFKCRRPA-DARRVFD 75

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEA-FRMMLYSNVE-PSSFTLVSVALACSNLSRR 196
           R+  +D+V+WN+++A   R G    A+EA  RM      E P S TLVSV  AC++    
Sbjct: 76  RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR-- 133

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             L   R+VH  +LR G +    +  A++  Y K G V+ A+ +F     R+ VSWN ++
Sbjct: 134 -ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
              + N    EA+    +M   G+     S+ + L AC  L  LD  + +H   +R   L
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG-L 251

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFI 374
             N  V +AL+  Y  C+  +   +VF+ + +KK  + WNAMI G+ QNE  E+A  LF 
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFA 311

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M ++  + P++ T+ SV+PA            IHG++I+  L +D YV  AL+DMYS+ 
Sbjct: 312 RM-QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKC 370

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           GR+ I++ +FD    R  ++WN MI GY   G    A+ L  EM+               
Sbjct: 371 GRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGS----------- 419

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCG 553
                  PN  T ++VL  C     + +G++  A   ++  L   +     +VD+  + G
Sbjct: 420 ------LPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAG 473

Query: 554 CLNFARRVFDLMPVRNVIT-WNVIIMAYGMH 583
            L+ A      MP+   I+ +  ++ A  +H
Sbjct: 474 KLDEAWSFIKNMPIEPGISVYGAMLGACKLH 504



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 16/423 (3%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLG 96
           +R + +W   +   AR+     A+ + + M   +   +PD+    +VL A A  + L   
Sbjct: 79  SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++HA  ++ G     V V+  +++ Y KCG+ +     VFD +  ++ VSWN+MI    
Sbjct: 139 REVHAFALRAGLD-ELVNVSTAVLDAYCKCGA-VEAARAVFDCMPVRNSVSWNAMIDGYA 196

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
             G    A+  F  M+   V+ +  ++++   AC  L   D +   R+VH   +RVG   
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEV---RRVHELLVRVGLSS 253

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL-VSWNTIVSSLSQNDKFLEAVMFLRQM 274
           N  + NAL+  YAK  R D A  +F    ++   +SWN ++   +QN+   +A     +M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            L  ++PD  ++ SV+PA + +      + IH Y++R+  L  + +V +AL+DMY  C  
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQ-LDQDVYVLTALIDMYSKCGR 372

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           V   RR+FD   D+ +  WNAMI GYG + + + A+ LF +M+    L PN TT  SV+ 
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL-PNETTFLSVLA 431

Query: 395 ACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           AC  +    + +       K   L  G + Y    ++D+  R G+++ + +   +M +  
Sbjct: 432 ACSHAGLVDEGQKYFASMKKDYGLEPGMEHY--GTMVDLLGRAGKLDEAWSFIKNMPIEP 489

Query: 452 TVS 454
            +S
Sbjct: 490 GIS 492



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 20/245 (8%)

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P   T ++++  C           +H      GL  +     AL +MY +  R   ++ +
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           FD M  RD V+WN ++ GY   G    A+  +  MQ  E  +               +P+
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGE---------------RPD 118

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           S+TL++VLP C    AL   +E+HA+A+R  L   V V +A++D Y KCG +  AR VFD
Sbjct: 119 SVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFD 178

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            MPVRN ++WN +I  Y  +G   E + L   MV EG     V   + + +A   AC   
Sbjct: 179 CMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEG-----VDVTDASVLAALQACGEL 233

Query: 624 GMVSE 628
           G + E
Sbjct: 234 GYLDE 238



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   +L  C A + LA G+ +HA      LA++ +  +AL +MY KC     ARRVFD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P R+ + WN ++  Y  +G     +E +  M  +G  GGE +P+ VT +++  AC+ +  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRM--QGEEGGE-RPDSVTLVSVLPACADARA 134

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +    ++ +      G++   +    V+D   + G VE A  + + MP
Sbjct: 135 LHACREV-HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP 181


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 297/842 (35%), Positives = 468/842 (55%), Gaps = 29/842 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   A++  + +A+     M    ++P+   F  ++   A ++ L LG++IH  +
Sbjct: 126 SWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRI 185

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G     + + N LV+MYG CGS   D+  VF R+ +   + W +MIA   + G+++ 
Sbjct: 186 INEGLEPDGI-LGNALVHMYGSCGS-FDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEE 243

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
            L  FR M    V+ +  T +S+   C NL   D ++ G  +    L     + T +  +
Sbjct: 244 GLLVFRKMDLEGVKANEVTYMSMVEVCRNL---DAVKEGEMIDARILESPFCSSTLLATS 300

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+++Y + G +D AK L +    RD+V+WN +V++ +QN    EA+  LR+M + G   +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  SVL AC++LE L  G+EIHA  L   +L     VG++++ MY  C + E    VF
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  K    WNA+I     N   ++AL LF  ME + GL  N  T+ S++ AC   E  
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGME-LEGLRSNEFTLLSLLEACGGLEDL 479

Query: 403 PDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                IH  A   G G +   V N++++MY+R G +  +K  FD +E +  V+W+ ++  
Sbjct: 480 KLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAA 539

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y    + G      +  Q ME E                KP  +T ++ L  C A++ L 
Sbjct: 540 YAQ-SKDGPGRRAFKFFQEMEAEG--------------IKPGEVTFVSALDACAAMATLE 584

Query: 522 KGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            G+ +H  A  +  + T +V+G+ +++MY KCG  + A+ VFD MP + +I+WN +I+AY
Sbjct: 585 HGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAY 644

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             +G   E L  L+ M+ +G       P+  T +++    SH+G++  G++ F     D+
Sbjct: 645 AHNGHALEALSSLQEMLLQG-----FDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDH 699

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G+EPS     C+VDLL R G ++ A +LI   P       AW +LL AC+ + + + G  
Sbjct: 700 GLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIR 759

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            A+ +F LEP  +  +V+L+N+Y+S   W  A  +RK M+ M V+KEPGCSWIE    +H
Sbjct: 760 CAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVH 819

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F++G+  H +  ++   LE L+ RMR+ GYVPDT+ V+H+V E +KE +L  HSE+LAI
Sbjct: 820 EFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAI 879

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            FG+++T PG TIRV KNLRVC+DCH ATK IS +  REI++RD  RFHHFK+G CSCGD
Sbjct: 880 VFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGD 939

Query: 881 YW 882
           +W
Sbjct: 940 FW 941



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 206/715 (28%), Positives = 355/715 (49%), Gaps = 42/715 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + +++  +REA+  +  M     +PD   F   L A A   +L  G+QIH+ V
Sbjct: 25  SWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSV 84

Query: 104 VKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V  G GL+S + ++N+LVNMYGKC  D+    KVFD +  +D VSW +M+A   + G W 
Sbjct: 85  V--GSGLTSNIIISNSLVNMYGKC-QDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWS 141

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            ALE    M    V+P+  T V++   C+ L   D   LGR++H   +  G E +  + N
Sbjct: 142 QALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD---LGRKIHHRIINEGLEPDGILGN 198

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY   G  DD K++F       ++ W T+++  SQN ++ E ++  R+M L G+K 
Sbjct: 199 ALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKA 258

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+  S++  C +L+ +  G+ I A  L +     ++ + ++L+ +Y  C  ++  + +
Sbjct: 259 NEVTYMSMVEVCRNLDAVKEGEMIDARILESP-FCSSTLLATSLISLYGQCGILDRAKGL 317

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
            + +  + +  WNAM+T   QN  + EA+ L  +M ++ G   N  T  SV+ AC   EA
Sbjct: 318 LEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRM-DMEGFGANKVTYLSVLEACANLEA 376

Query: 402 FPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                 IH   +  G L R+  V N+++ MY + G+ E + ++F+ M  +D VSWN +I 
Sbjct: 377 LSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVIN 436

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                 +  DAL L      ME E  R+N +              TL+++L  CG L  L
Sbjct: 437 ASVGNSKFQDALELF---HGMELEGLRSNEF--------------TLLSLLEACGGLEDL 479

Query: 521 AKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
              ++IHA A       +   VG+++V+MYA+CG L  A++ FD +  + ++ W++I+ A
Sbjct: 480 KLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAA 539

Query: 580 YGMH--GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           Y     G G+   +  + M AEG     +KP EVTF++   AC+    +  G  +  +  
Sbjct: 540 YAQSKDGPGRRAFKFFQEMEAEG-----IKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
               +E S      ++++ G+ G   DA  + + MP +     +W+SL+ A   H    +
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKC--LISWNSLIVA-YAHNGHAL 651

Query: 698 GEIAAQNLFLLE---PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
             +++    LL+   PD  +   +L  +  +  L       R  +++ G+    G
Sbjct: 652 EALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 175/572 (30%), Positives = 282/572 (49%), Gaps = 38/572 (6%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKC + + D   VFD I+ K+  SW  M+A   + G +  ALE F  M +    P   
Sbjct: 1   MYGKC-ARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKV 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
             V    AC+     D    GRQ+H + +  G   N  I N+L+ MY K   V  A+ +F
Sbjct: 60  VFVIALDACAASGELDH---GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVF 116

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
                RD+VSW  +++  +QN  + +A+  L +M   G+KP+ V+  +++  C+ L +LD
Sbjct: 117 DGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD 176

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G++IH + + N+ L  +  +G+ALV MY +C   +  + VF  +    + LW  MI G 
Sbjct: 177 LGRKIH-HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGC 235

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            QN   EE L++F KM ++ G+  N  T  S+V  C   +A  + E I    ++      
Sbjct: 236 SQNGQYEEGLLVFRKM-DLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSS 294

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD---ALMLLRE 477
             +  +L+ +Y + G ++ +K + + M  RD V+WN M+T    C Q+GD   A+ LLR 
Sbjct: 295 TLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTA---CAQNGDNWEAIHLLRR 351

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLA 536
           M +ME                    N +T ++VL  C  L AL++G+EIHA  +   +L 
Sbjct: 352 M-DMEG----------------FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQ 394

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            +V VG++++ MY KCG    A  VF+ MP ++ ++WN +I A   + + Q+ LEL   M
Sbjct: 395 REVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGM 454

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
             EG     ++ NE T ++L  AC     +     +  +         S      VV++ 
Sbjct: 455 ELEG-----LRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMY 509

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            R G + DA +  + +  E     AWS +L A
Sbjct: 510 ARCGSLLDAKKAFDSL--EEKGLVAWSIILAA 539



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 25/269 (9%)

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY +  R+  +  +FD +  ++  SW  M+  Y+  G + +AL L   MQ    E  R  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQ---WEGTR-- 55

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                       P+ +  +  L  C A   L  G++IH+  + + L +++++ ++LV+MY
Sbjct: 56  ------------PDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMY 103

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            KC  +  A +VFD M +R+V++W  ++  Y  +G   + LE L  M AEG     VKPN
Sbjct: 104 GKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEG-----VKPN 158

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           +VTF+ +   C+   ++  G  + +++ ++ G+EP       +V + G  G  +D   + 
Sbjct: 159 QVTFVTIVDVCAKLRLLDLGRKIHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVF 217

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           + M         W++++  C  +   E G
Sbjct: 218 SRMGQ--SSVLLWTTMIAGCSQNGQYEEG 244


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/695 (38%), Positives = 425/695 (61%), Gaps = 29/695 (4%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           S L +   L+  +Q+H   +  G   NTF+ N+LM  Y   G + DAK +F     +++V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SW  ++S L++ND F+EA+   R+M +   KP+ V+I+SVLPA ++L ++   K +H + 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           +R      N FV +ALVDMY     +   R++F+ +S++ +  WNA+++GY  + + EEA
Sbjct: 149 VRGG-FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEA 207

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           + LF  M    GL  +  T+ S++PA +         GIHG  I+ G   D++++ ALMD
Sbjct: 208 IDLFNLMRR-KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMD 266

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           +Y     ++ +  +F +M V+D  +W  M+TG++  G+H D     R +++  +     N
Sbjct: 267 IYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFS-SGRHWD-----RAIKHFNKMLGIQN 320

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
           +          K +SI LM +L  C    AL +G+ +HA AI+   A ++ VGSA++DMY
Sbjct: 321 L----------KLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMY 370

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           A CG L  A+R F  M  ++V+ WN +I   GM+G G + ++L   M     +G  + P+
Sbjct: 371 ANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM-----KGSGLDPD 425

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           E TF+++  ACSH+GMV EG+ +FY M     + P+  HYACV+D+LGRAG+++ AY  I
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFI 485

Query: 670 NMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           N MP  P+FD    +S+LLGACRIH N+++G   +Q +F +EP+ A +YVLLSN+Y+ A 
Sbjct: 486 NNMPFQPDFD---VYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAG 542

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+     R  ++   ++K+PG S IE   EI+ F+AG+  H Q  ++ G L+ L  +++
Sbjct: 543 NWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIK 602

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           K GYVP+T+ +L +V+++ K+ +L  HSEK+AIAFG++ T P T IR+ KNLR C+DCH 
Sbjct: 603 KAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHT 662

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A+KF+SK+  R ++++D  RFH F++G CSC DYW
Sbjct: 663 ASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 267/532 (50%), Gaps = 33/532 (6%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           ++DL   +QIHA ++  G   ++  ++N+L+N Y  CG  + D  ++F     K+ VSW 
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGL-LADAKQIFHHTPYKNVVSWT 91

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
            +I+ L +   +  A++ FR M+  N +P++ T+ SV  A +NL     +R+ + VH   
Sbjct: 92  ILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGL---IRIAKSVHCFW 148

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +R G E N F+  AL+ MY+K G +  A+ LF+S  +R++V+WN IVS  S +    EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M  +G+  D  +I S++PA   +  L  G  IH + +R     D   + +AL+D+
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH-IKTALMDI 267

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y +   V+   RVF  +S K +A W  M+TG+    + + A+  F KM  +  L  ++  
Sbjct: 268 YVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIA 327

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +  ++ +C  S A      +H  AIK     + +V +A++DMY+  G +E +K  F  M 
Sbjct: 328 LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG 387

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D V WN MI G  + G   DA+ L  +M+             LD       P+  T +
Sbjct: 388 EKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGS----------GLD-------PDESTFV 430

Query: 509 TVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +VL  C     + +G +I  + ++ + +  ++   + ++D+  + G L+ A    + MP 
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490

Query: 568 R-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           + +   ++ ++ A  +HG  +   E+ + +        E++PN+  +  L +
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIF-------EMEPNDAGYYVLLS 535



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 223/430 (51%), Gaps = 12/430 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+++ F EAI  + EM   + +P+     +VL A A +  + + K +H   
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+   +V V   LV+MY K G  M    ++F+ ++E++ V+WN++++     G  + 
Sbjct: 149 VRGGFE-GNVFVETALVDMYSKFGC-MGVARQLFESMSERNVVTWNAIVSGYSDHGFSEE 206

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A++ F +M    +    +T++S+  A  ++     L++G  +HG  +R G E +  I  A
Sbjct: 207 AIDLFNLMRRKGLLVDFYTIMSLIPASLSVG---CLQVGTGIHGFIIRTGYENDKHIKTA 263

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
           LM +Y     VDDA  +F     +D+ +W  +++  S    +  A+  F + + ++ +K 
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++  +L +CSH   L  G+ +HA A++     +N FVGSA++DMY NC  +E  +R 
Sbjct: 324 DSIALMGILSSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  + +K +  WNAMI G G N Y  +A+ LF++M+  +GL P+ +T  SV+ AC  +  
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYACSHAGM 441

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
             +   I  H +K           A ++D+  R G+++ + +  ++M  +      + + 
Sbjct: 442 VYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLL 501

Query: 461 GYTICGQHGD 470
           G   C  HG+
Sbjct: 502 G--ACRIHGN 509


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 304/788 (38%), Positives = 431/788 (54%), Gaps = 82/788 (10%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN +I      G  +  L+ +R M      P  +T   V  AC  +      R G  VH 
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIP---SFRCGASVHA 169

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDK 263
                G EWN F+ N L++MY + G  ++A+ +F    +R   DLVSWN+IV++  Q   
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 229

Query: 264 FLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            + A+ MF R     GI+PD VS+ +VLPAC+ +     GK++H YALR+  L ++ FVG
Sbjct: 230 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSG-LFEDVFVG 288

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE---- 378
           +A+VDMY  C  +E   +VF+ +  K +  WNAM+TGY Q    ++AL LF K+ E    
Sbjct: 289 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 348

Query: 379 ------------------------------VAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
                                         + G  PN  T+ S++  C  +      +  
Sbjct: 349 LNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKET 408

Query: 409 HGHAIKLGL-------GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD--TVSWNTMI 459
           H HAIK  L       G D  V NAL+DMYS+    + ++ +FD +  +D   V+W  +I
Sbjct: 409 HCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLI 468

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK----PNSITLMTVLPGCG 515
            G     QHG+A                N   +L   +L+P     PN+ T+   L  C 
Sbjct: 469 GGNA---QHGEA----------------NEALELFSQMLQPDNFVMPNAFTISCALMACA 509

Query: 516 ALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            L AL  G++IHAY +RN   + ++ V + L+DMY+K G ++ AR VFD M  RN ++W 
Sbjct: 510 RLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWT 569

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++  YGMHG G+E L++   M     +   + P+ VTF+ +  ACSHSGMV +G++ F 
Sbjct: 570 SLMTGYGMHGRGEEALQIFYEM-----QKVXLVPDGVTFVVVLYACSHSGMVDQGINYFN 624

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M  D+G+ P  +HYAC+VDLL RAG++++A +LI  MP +   A  W +LL ACR++ N
Sbjct: 625 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPA-VWVALLSACRVYAN 683

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           VE+GE AA  L  LE      Y LLSNIY++A+ W     +R  MK  G++K PGCSW++
Sbjct: 684 VELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 743

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
                  F AGD SH  S+Q++  L +L +R++  GYVPD    LH+V++EEK  LL  H
Sbjct: 744 GRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEH 803

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLA+A+GIL T PG  IR+ KNLR C DCH A  +IS I   EII+RD  RFHHFKNG
Sbjct: 804 SEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNG 863

Query: 875 TCSCGDYW 882
           +CSC  YW
Sbjct: 864 SCSCRGYW 871



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 182/619 (29%), Positives = 298/619 (48%), Gaps = 95/619 (15%)

Query: 12  PSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRS 71
           P+  +S   T   PA   + L      +     W + +R         + +  Y  M R 
Sbjct: 80  PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRL 139

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
             +PD++ FP VLKA   I     G  +HA V   G+   +V V N LV+MYG+CG+  W
Sbjct: 140 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEW-NVFVGNGLVSMYGRCGA--W 196

Query: 132 D-VYKVFDRITEK---DQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSV 186
           +   +VFD + E+   D VSWNS++A   + G    A++ F RM     + P + +LV+V
Sbjct: 197 ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNV 256

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+++        G+QVHG +LR G + + F+ NA++ MYAK G +++A  +F+  + 
Sbjct: 257 LPACASVG---AWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 313

Query: 246 RDLVSWNTIVSSLSQNDKF-----------------------------------LEAVMF 270
           +D+VSWN +V+  SQ  +F                                    EA+  
Sbjct: 314 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 373

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS------FVGSA 324
            RQM L G +P+ V++ S+L  C+    L  GKE H +A++  + +D +       V +A
Sbjct: 374 FRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 433

Query: 325 LVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG- 381
           L+DMY  C+  +  R +FD I   D+ +  W  +I G  Q+    EAL LF +M +    
Sbjct: 434 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 493

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR------YVQNALMDMYSRMG 435
           + PNA T+S  + AC R  A      IH + +     R+R      +V N L+DMYS+ G
Sbjct: 494 VMPNAFTISCALMACARLGALRFGRQIHAYVL-----RNRFESAMLFVANCLIDMYSKSG 548

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++ ++ +FD+M  R+ VSW +++TGY + G+  +AL +  EMQ +              
Sbjct: 549 DVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXL------------ 596

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD--VVVG----SALVDMY 549
                 P+ +T + VL  C     + +G  I+ +   N +  D  VV G    + +VD+ 
Sbjct: 597 -----VPDGVTFVVVLYACSHSGMVDQG--INYF---NGMNKDFGVVPGAEHYACMVDLL 646

Query: 550 AKCGCLNFARRVFDLMPVR 568
           ++ G L+ A  +   MP++
Sbjct: 647 SRAGRLDEAMELIRGMPMK 665



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 208/435 (47%), Gaps = 68/435 (15%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           I+PD  +   VL A A +   S GKQ+H + ++ G     V V N +V+MY KCG  M +
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGL-FEDVFVGNAVVDMYAKCGM-MEE 303

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWD------------------------------ 162
             KVF+R+  KD VSWN+M+    + G++D                              
Sbjct: 304 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQ 363

Query: 163 -----LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-- 215
                 AL+ FR ML    EP+  TLVS+   C++      L  G++ H ++++   W  
Sbjct: 364 RGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGT---LLHGKETHCHAIK---WIL 417

Query: 216 ---------NTFIMNALMAMYAKLGRVDDAKTLFKSF--EDRDLVSWNTIVSSLSQNDKF 264
                    +  ++NAL+ MY+K      A+ +F     +DR +V+W  ++   +Q+ + 
Sbjct: 418 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 477

Query: 265 LEAVMFLRQMAL--RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            EA+    QM      + P+  +I+  L AC+ L  L  G++IHAY LRN       FV 
Sbjct: 478 NEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA 537

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           + L+DMY    +V+  R VFD +  +    W +++TGYG +   EEAL +F +M++V  L
Sbjct: 538 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVX-L 596

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGI---HGHAIKLGL--GRDRYVQNALMDMYSRMGRI 437
            P+  T   V+ AC  S      +GI   +G     G+  G + Y    ++D+ SR GR+
Sbjct: 597 VPDGVTFVVVLYACSHSGMV--DQGINYFNGMNKDFGVVPGAEHYA--CMVDLLSRAGRL 652

Query: 438 EISKTIFDDMEVRDT 452
           + +  +   M ++ T
Sbjct: 653 DEAMELIRGMPMKPT 667


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/745 (39%), Positives = 431/745 (57%), Gaps = 41/745 (5%)

Query: 147  SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
            +WN  +      G+   A++ F+ +L S +   S TLV +  A       D L LG Q+H
Sbjct: 861  AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGA---DDLDLGEQIH 917

Query: 207  GNSLRVGEWNTF-----IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
               ++    ++F     + N+LM MY+K G V  A+  F +  + DL+SWNT++SS +QN
Sbjct: 918  ALVIK----SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN 973

Query: 262  DKFLEAVMFLRQMALRGIKPDGVSIASVLPACS---HLEMLDTGKEIHAYALRNDILIDN 318
            +  +EA+   R +   G+KPD  ++ASVL ACS     E    G ++H YA++  I I++
Sbjct: 974  NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI-IND 1032

Query: 319  SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            SFV +AL+D+Y    +++    +     D  +A WNA++ GY ++    +AL  F  M E
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 379  VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            + G+  +  T+++ + A          + I  +AIKLG   D +V + ++DMY + G + 
Sbjct: 1093 M-GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151

Query: 439  ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
             +  +F ++   D V+W TMI+GY   G    AL +   M+                 V 
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR-----------------VS 1194

Query: 499  RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              +P+  T  T++     L+AL +GK+IHA  ++   + D  VG++LVDMY KCG +  A
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDA 1254

Query: 559  RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             RVF  M VR V+ WN +++    HG   E L L + M + G     ++P++VTFI + +
Sbjct: 1255 YRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG-----IQPDKVTFIGVLS 1309

Query: 619  ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            ACSHSG+ SE    F  M   YGI P  +HY+C+VD LGRAG++++A  +I  MP +   
Sbjct: 1310 ACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK-AS 1368

Query: 679  AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
            A  + +LLGACR   + E  +  A  L  L+P  +S YVLLSNIY++++ WD   D R  
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428

Query: 739  MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSC 797
            MK   V+K+PG SWI+  +++H F+  D SH Q+  ++  +E+L +R+R+EG YVPDT  
Sbjct: 1429 MKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDF 1488

Query: 798  VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
             L +V EEEKE  L  HSEKLAIAFG+++TPP  TIRV KNLRVC DCH A K ISK+  
Sbjct: 1489 TLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQ 1548

Query: 858  REIILRDVRRFHHFKNGTCSCGDYW 882
            REI+LRD  RFHHF+NGTCSCGDYW
Sbjct: 1549 REIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 267/544 (49%), Gaps = 37/544 (6%)

Query: 34   LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
             P  Q     +W + L     + Q   AI  +  + RS I  D+     +L A  G  DL
Sbjct: 851  FPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910

Query: 94   SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             LG+QIHA V+K  +    V V+N+L+NMY K G  ++   K F    E D +SWN+MI+
Sbjct: 911  DLGEQIHALVIKSSFA-PVVPVSNSLMNMYSKAGV-VYAAEKTFINSPELDLISWNTMIS 968

Query: 154  TLCRFGKWDLALEA---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
            +   + + +L +EA   FR +L   ++P  FTL SV  ACS     +   LG QVH  ++
Sbjct: 969  S---YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025

Query: 211  RVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            + G  N +F+  AL+ +Y+K G++D+A+ L     D DL SWN I+    +++K  +A+ 
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085

Query: 270  FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSAL 325
                M   GI  D +++A+ + A   L  L  GK+I AYA++    ND+     +V S +
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL-----WVSSGV 1140

Query: 326  VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            +DMY  C ++     +F  IS      W  MI+GY +N  ++ AL ++  M  V+G+ P+
Sbjct: 1141 LDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM-RVSGVQPD 1199

Query: 386  ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
              T ++++ A     A    + IH + +KL    D +V  +L+DMY + G ++ +  +F 
Sbjct: 1200 EYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFR 1259

Query: 446  DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
             M+VR  V WN M+ G    G   +AL L R MQ+       N +          +P+ +
Sbjct: 1260 KMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS-------NGI----------QPDKV 1302

Query: 506  TLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T + VL  C      ++  K   A      +  ++   S LVD   + G +  A  V   
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIAS 1362

Query: 565  MPVR 568
            MP +
Sbjct: 1363 MPFK 1366



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 171/663 (25%), Positives = 288/663 (43%), Gaps = 90/663 (13%)

Query: 93   LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
            + + + +H + VK G+ L  + V+  LVN+Y K G  +     +FD++ E+D V WN M+
Sbjct: 733  VQVSETVHGYAVKIGFELD-LFVSGALVNIYCKYGL-VGQARLLFDKMPERDAVLWNVML 790

Query: 153  ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                     D AL  F     S   P    L  V    ++    +  R   QV   +++ 
Sbjct: 791  KAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK- 849

Query: 213  GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
                                      +F   +  ++ +WN  ++      + + A+   +
Sbjct: 850  --------------------------MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFK 883

Query: 273  QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-----VGSALVD 327
             +    I  D V++  +L A    + LD G++IHA      ++I +SF     V ++L++
Sbjct: 884  TLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA------LVIKSSFAPVVPVSNSLMN 937

Query: 328  MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
            MY     V    + F    +  +  WN MI+ Y QN  + EA+  F  +    GL P+  
Sbjct: 938  MYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR-DGLKPDQF 996

Query: 388  TMSSVVPACV---RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
            T++SV+ AC      E F     +H +AIK G+  D +V  AL+D+YS+ G+++ ++ + 
Sbjct: 997  TLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056

Query: 445  DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
                  D  SWN ++ GY    +   AL     M  M           +DE         
Sbjct: 1057 HGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG--------IPIDE--------- 1099

Query: 505  ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            ITL T +   G L  L +GK+I AYAI+     D+ V S ++DMY KCG +  A  +F  
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGE 1159

Query: 565  MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            +   + + W  +I  Y  +G+    L +   M   G     V+P+E TF  L  A S   
Sbjct: 1160 ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG-----VQPDEYTFATLIKASSCLT 1214

Query: 625  MVSEGMDLFYK-MKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
             + +G  +    +K DY +    DH+    +VD+  + G V+DAY++   M  +  K   
Sbjct: 1215 ALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQDAYRVFRKM--DVRKVVF 1268

Query: 682  WSSLLGACRIHQNVEIGEIAAQNLFL------LEPDVASHYVLL-----SNIYSSAQLWD 730
            W+++L     H +V+     A NLF       ++PD  +   +L     S ++S A  + 
Sbjct: 1269 WNAMLLGLAQHGHVD----EALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYF 1324

Query: 731  KAM 733
             AM
Sbjct: 1325 DAM 1327



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 227/513 (44%), Gaps = 52/513 (10%)

Query: 85   KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
            ++   + DL LGK+ HA +V  G  L    + N L+ MY KCGS +    +VFD+ +++D
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSG-DLPDRYLTNNLITMYSKCGS-LCSARQVFDKSSDRD 676

Query: 145  QVSWNSMIATLCRFG--KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
             V+WNS++A   +F    ++  LE FR+         S T +++A           +++ 
Sbjct: 677  LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736

Query: 203  RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
              VHG ++++G E + F+  AL+ +Y K G V  A+ LF    +RD V WN ++ +  +N
Sbjct: 737  ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796

Query: 262  DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                EA+ F       G  PD  ++  V+                     N  + +N   
Sbjct: 797  SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV------------------NSDVSNNRKR 838

Query: 322  GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
             +  V  Y          ++F F     I  WN  +T +        A+  F  +   + 
Sbjct: 839  HAEQVKAYA--------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-ST 889

Query: 382  LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            +  ++ T+  ++ A V ++     E IH   IK        V N+LM+MYS+ G +  ++
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 442  TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
              F +    D +SWNTMI+ Y       +A+   R++        R+ +          K
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL-------RDGL----------K 992

Query: 502  PNSITLMTVLPGCGALSA---LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
            P+  TL +VL  C           G ++H YAI+  +  D  V +AL+D+Y+K G ++ A
Sbjct: 993  PDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052

Query: 559  RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
              +       ++ +WN I+  Y    + ++ LE
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 233/503 (46%), Gaps = 73/503 (14%)

Query: 199  LRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            L+LG++ H   +  G+  + ++ N L+ MY+K G +  A+ +F    DRDLV+WN+I+++
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 258  LSQ-NDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTG-----KEIHAYAL 310
             +Q  D   E V  L    L G+ +  G SI  +  A      L +G     + +H YA+
Sbjct: 687  YAQFADSSYENV--LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 311  RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
            +    +D  FV  ALV++YC    V   R +FD + ++   LWN M+  Y +N + +EAL
Sbjct: 745  KIGFELD-LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 371  MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
              F                     A  RS  FPD   +  H +  G+  D  V N     
Sbjct: 804  RFF--------------------SAFHRSGFFPDFSNL--HCVIGGVNSD--VSNNRKRH 839

Query: 431  YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
              ++    +    FD  +  +  +WN  +T +   GQ   A+                  
Sbjct: 840  AEQVKAYAMKMFPFD--QGSNIFAWNKKLTEFLHAGQIVAAI------------------ 879

Query: 491  YDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
             D  +T+LR     +S+TL+ +L        L  G++IHA  I++  A  V V ++L++M
Sbjct: 880  -DCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNM 938

Query: 549  YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
            Y+K G +  A + F   P  ++I+WN +I +Y  +    E +   ++++ +G     +KP
Sbjct: 939  YSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDG-----LKP 993

Query: 609  NEVTFIALFAACSHSGMVSEGMDL-----FYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
            ++ T  ++  ACS +G   E   L      Y +K   GI         ++DL  + GK++
Sbjct: 994  DQFTLASVLRACS-TGDEGEYFTLGSQVHVYAIK--CGIINDSFVSTALIDLYSKGGKMD 1050

Query: 664  DAYQLINMMPPEFDKAGAWSSLL 686
            +A  L++    +FD A +W++++
Sbjct: 1051 EAEFLLH-GKYDFDLA-SWNAIM 1071


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/768 (37%), Positives = 429/768 (55%), Gaps = 39/768 (5%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKCGS + D   VF  I   + VSW  ++A   R G +  AL  +R M+   + P   
Sbjct: 1   MYGKCGS-VADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
             V     CS  S +D L+ G+ +H   L  R+ E++  +  AL+ MYA+   ++ A+  
Sbjct: 60  MFVVAIGVCS--SSKD-LKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKT 116

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---GIKPDGVSIASVLPACSHL 296
           F     + LV+WN +++  S+N     A+   + M  +   G+KPD ++ +S L AC+ +
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVV 176

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             +  G+EI A  + +    D S V +AL++MY  C  +E  R+VFD + ++ +  WN M
Sbjct: 177 GDISQGREIEARTVASGYASD-SIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTM 235

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+GY +     +AL LF +M       PN  T   ++ AC   E       IH    + G
Sbjct: 236 ISGYAKQGAATQALELFQRMGP-NDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294

Query: 417 LGRDRYVQNALMDMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
              D  + N L++MY++    +E ++ +F+ M  RD ++WN +I  Y   GQ  DAL + 
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           ++MQ         NV           PN ITL  VL  C  L A  +GK +HA       
Sbjct: 355 KQMQ-------LENV----------APNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             DVV+ ++L++MY +CG L+    VF  +  +++++W+ +I AY  HG  +  LE    
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWE 457

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           ++ EG     +  ++VT ++  +ACSH GM+ EG+  F  M  D+G+ P   H+ C+VDL
Sbjct: 458 LLQEG-----LAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDL 512

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP-DVAS 714
           L RAG++E A  LI+ MP   D A AW+SLL  C++H + +     A  LF LE  D  S
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPD-AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHS 571

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
              LLSN+Y+ A  WD   DVRK       RK PGCS+IE  D +H+F+AGD SH + E 
Sbjct: 572 TVTLLSNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEEL 628

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           +   ++ LS++M+  GYVPD   VLHNV EEEKE +LC HSEKLAIA+G+++TPPGT + 
Sbjct: 629 IAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLH 688

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR C DCH A KFIS+I  R+I++RD  RFHHF+NG+CSC DYW
Sbjct: 689 IVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 281/589 (47%), Gaps = 48/589 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + AR+  +REA+  Y  M    ++PD   F   +   +  +DL  G+ +HA +
Sbjct: 25  SWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMI 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       + +   L+ MY +C  D+    K FD + +K  V+WN++IA   R G    
Sbjct: 85  LETRLLEFDIILGTALITMYARC-RDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRG 143

Query: 164 ALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           AL+ ++ M+  + E   P + T  S   AC+ +     +  GR++   ++  G   ++ +
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACTVVG---DISQGREIEARTVASGYASDSIV 200

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NAL+ MY+K G ++ A+ +F   ++RD+++WNT++S  ++     +A+   ++M     
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC-REVECG 338
           KP+ V+   +L AC++LE L+ G+ IH   +R D    +  +G+ L++MY  C   +E  
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIH-RKVREDGYESDLVIGNVLLNMYTKCSSSLEEA 319

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R+VF+ +  + +  WN +I  Y Q    ++AL +F +M ++  + PN  T+S+V+ AC  
Sbjct: 320 RQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQM-QLENVAPNEITLSNVLSACAV 378

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A    + +H          D  ++N+LM+MY+R G ++ +  +F  +  +  VSW+T+
Sbjct: 379 LGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTL 438

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I  Y    QHG +   L     + +E                  + +T+++ L  C    
Sbjct: 439 IAAY---AQHGHSRTGLEHFWELLQEG--------------LAADDVTMVSTLSACSHGG 481

Query: 519 ALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVI 576
            L +G +     + +  LA D      +VD+ ++ G L  A  +   MP + + + W  +
Sbjct: 482 MLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSL 541

Query: 577 IMAYGMHGEGQE------------------VLELLKNMVAEGSRGGEVK 607
           +    +H + +                    + LL N+ AE  R  +V+
Sbjct: 542 LSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVR 590


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/793 (35%), Positives = 436/793 (54%), Gaps = 96/793 (12%)

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           R  ++    +N+ I   C+ G  + A+E   M   S +E  +++ V + L   + S  DG
Sbjct: 60  RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSV-LQLCAGSKSLTDG 118

Query: 199 LRLGRQVHGNSLRVGEW----------------------------NTFIMNALMAMYAKL 230
            ++   +  N++ V E                             N ++ N +++ YAK+
Sbjct: 119 KKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 231 G--------------------RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           G                    R + A  LF    DRD++SWN+++S    N      +  
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEI 238

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            +QM   GI  D  +I SVL  C++   L  GK +H+ A+++      +F  + L+DMY 
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINF-SNTLLDMYS 297

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C +++   RVF+ + ++ +  W +MI GY ++   + A+ L  +ME+  G+  +    +
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEK-EGVKLDVVATT 356

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++ AC RS +  + + +H +     +  + +V NALMDMY++ G ++ + ++F  M V+
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK 416

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D +SWNTMI                                         KP+S T+  +
Sbjct: 417 DIISWNTMIG--------------------------------------ELKPDSRTMACI 438

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           LP C +LSAL +GKEIH Y +RN  ++D  V +ALVD+Y KCG L  AR +FD++P +++
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++W V+I  YGMHG G E +     M     R   ++P+EV+FI++  ACSHSG++ +G 
Sbjct: 499 VSWTVMISGYGMHGYGNEAIATFNEM-----RDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             FY MK+D+ IEP  +HYAC+VDLL R G +  AY+ I  +P   D A  W +LL  CR
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD-ATIWGALLCGCR 612

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           I+ ++E+ E  A+ +F LEP+   +YVLL+NIY+ A+ W++   +R+K+ + G+RK PGC
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGC 672

Query: 751 SWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           SWIE   +++ F++G+  SH  S+++   L+ +  +M++EGY P T   L N +E +KE 
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEM 732

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            LCGHSEKLA+AFG+L  PP  T+RV KNLRVC DCH+  KF+SK   REI+LRD  RFH
Sbjct: 733 ALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFH 792

Query: 870 HFKNGTCSCGDYW 882
           HFKNG CSC  +W
Sbjct: 793 HFKNGYCSCRGFW 805



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 242/488 (49%), Gaps = 55/488 (11%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD++ ++D +SWNSMI+     G  +  LE ++ M+Y  ++    T++SV + C+N  
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN-- 263

Query: 195 RRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L LG+ VH  +++   E      N L+ MY+K G +D A  +F+   +R++VSW +
Sbjct: 264 -SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++  +++ +   A+  L+QM   G+K D V+  S+L AC+    LD GK++H Y   N+
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            +  N FV +AL+DMY  C  ++    VF  +  K I  WN MI                
Sbjct: 383 -MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI---------------- 425

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
                   L P++ TM+ ++PAC    A    + IHG+ ++ G   DR+V NAL+D+Y +
Sbjct: 426 ------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G + +++ +FD +  +D VSW  MI+GY + G   +A+    EM++   E         
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIE--------- 530

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAK 551
                   P+ ++ +++L  C     L +G     Y ++N    +  +   + +VD+ ++
Sbjct: 531 --------PDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSR 581

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
            G L+ A    + +P+  +   W  ++    ++ + +     L   VAE  R  E++P  
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIE-----LAEKVAE--RVFELEPEN 634

Query: 611 VTFIALFA 618
             +  L A
Sbjct: 635 TGYYVLLA 642



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 209/432 (48%), Gaps = 47/432 (10%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  S+ S   SN   E  L  Y +M    I  D     +VL   A    LSLGK +H+ 
Sbjct: 218 SW-NSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K  +    +  +NTL++MY KCG D+    +VF+++ E++ VSW SMIA   R G+ D
Sbjct: 277 AIKSTFE-RRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTF 218
            A+   + M    V+       S+  AC   +R   L  G+ VH     N++   E N F
Sbjct: 335 GAIRLLQQMEKEGVKLDVVATTSILHAC---ARSGSLDNGKDVHDYIKANNM---ESNLF 388

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MY K G +D A ++F +   +D++SWNT++  L                    
Sbjct: 389 VCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL-------------------- 428

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            KPD  ++A +LPAC+ L  L+ GKEIH Y LRN    D   V +ALVD+Y  C  +   
Sbjct: 429 -KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH-VANALVDLYVKCGVLGLA 486

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD I  K +  W  MI+GYG + Y  EA+  F +M + AG+ P+  +  S++ AC  
Sbjct: 487 RLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRD-AGIEPDEVSFISILYACSH 545

Query: 399 SEAFPDKEG-----IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
           S     ++G     I  +   +    + Y    ++D+ SR G +  +    + + +  D 
Sbjct: 546 SGLL--EQGWRFFYIMKNDFNIEPKLEHYA--CMVDLLSRTGNLSKAYEFIETLPIAPDA 601

Query: 453 VSWNTMITGYTI 464
             W  ++ G  I
Sbjct: 602 TIWGALLCGCRI 613


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/846 (34%), Positives = 469/846 (55%), Gaps = 42/846 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW  ++     +     A+  + +M     +  +    +VL A A +    +GK +H + 
Sbjct: 266  SWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYS 325

Query: 104  VKYG--YGLSSV------TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS-WNSMIAT 154
            +K G  + L SV       + + LV MY KCG DM    +VFD +  K  V  WN ++  
Sbjct: 326  MKSGLLWDLESVQSGIDEALGSKLVFMYVKCG-DMGSARRVFDAMPSKGNVHVWNLIMGG 384

Query: 155  LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS-RRDGLRLGRQVHGNSLRVG 213
              +  +++ +L  F  M    + P    L  +    + LS  RDGL      HG  +++G
Sbjct: 385  YAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGL----VAHGYLVKLG 440

Query: 214  -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
                  + NAL++ YAK   +D+A  +F     +D +SWN+++S  + N    EA+    
Sbjct: 441  FGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFV 500

Query: 273  QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            +M ++G + D  ++ SVLPAC+       G+ +H Y+++   LI  + + +AL+DMY NC
Sbjct: 501  RMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG-LIGETSLANALLDMYSNC 559

Query: 333  REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +     ++F  ++ K +  W AMIT Y +    ++   L  +M  + G+ P+   ++SV
Sbjct: 560  SDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMV-LDGIKPDVFAVTSV 618

Query: 393  VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
            +      E+    + +HG+AI+ G+ +   V NALM+MY     +E ++ +FD +  +D 
Sbjct: 619  LHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDI 678

Query: 453  VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
            +SWNT+I GY+      ++  L  +M                  +L+ KPN++T+  +LP
Sbjct: 679  ISWNTLIGGYSRNNFANESFSLFSDM------------------LLQFKPNTVTMTCILP 720

Query: 513  GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
               ++S+L +G+EIHAYA+R     D    +ALVDMY KCG L  AR +FD +  +N+I+
Sbjct: 721  AVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLIS 780

Query: 573  WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
            W ++I  YGMHG G++ + L + M     RG  V+P+  +F A+  AC HSG+ +EG   
Sbjct: 781  WTIMIAGYGMHGCGKDAVALFEQM-----RGSGVEPDTASFSAILYACCHSGLTAEGWKF 835

Query: 633  FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            F  M+ +Y IEP   HY C+VDLL   G +++A++ I  MP E D +  W SLL  CRIH
Sbjct: 836  FNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSS-IWVSLLHGCRIH 894

Query: 693  QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            ++V++ E  A  +F LEP+   +YVLL+NIY+ A+ W+    ++ K+   G+R+  GCSW
Sbjct: 895  RDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSW 954

Query: 753  IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
            IE   ++H F+A + +H +  ++  FL++++ RMR+EG+ P     L   N+   +  LC
Sbjct: 955  IEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALC 1014

Query: 813  GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            GHS KLA+ FG+L+ P G  IRV KN +VC+ CH+A KFISK+ +REIILRD  RFHHF+
Sbjct: 1015 GHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFE 1074

Query: 873  NGTCSC 878
             G CSC
Sbjct: 1075 GGRCSC 1080



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 207/718 (28%), Positives = 343/718 (47%), Gaps = 61/718 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + + A++  F+E +  + +M    + PD  A   VLK +A +  ++ G+ IH  + 
Sbjct: 166 WTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLE 225

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G G  +  VAN L+ +Y +CG  M D  +VFD +  +D +SWNS I+     G  D A
Sbjct: 226 KLGLG-EACAVANALIALYSRCGC-MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRA 283

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL-GRQVHGNSLRVG-EW------- 215
           ++ F  M     E SS T++SV  AC+ L    G  L G+ VHG S++ G  W       
Sbjct: 284 VDLFSKMWSEGTEISSVTVLSVLPACAEL----GFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 216 --NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS-WNTIVSSLSQNDKFLEAVMFLR 272
             +  + + L+ MY K G +  A+ +F +   +  V  WN I+   ++  +F E+++   
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           QM   GI PD  +++ +L   + L     G   H Y ++       + V +AL+  Y   
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCA-VCNALISFYAKS 458

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             ++    VFD +  +    WN++I+G   N  + EA+ LF++M  + G   ++TT+ SV
Sbjct: 459 NMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRM-WMQGHELDSTTLLSV 517

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PAC RS  +     +HG+++K GL  +  + NAL+DMYS       +  IF +M  ++ 
Sbjct: 518 LPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNV 577

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VSW  MIT YT  G       LL+EM              LD      KP+   + +VL 
Sbjct: 578 VSWTAMITSYTRAGLFDKVAGLLQEMV-------------LDGI----KPDVFAVTSVLH 620

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           G     +L +GK +H YAIRN +   + V +AL++MY  C  +  AR VFD +  +++I+
Sbjct: 621 GFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIIS 680

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I  Y  +    E   L  +M+       + KPN VT   +  A +    +  G ++
Sbjct: 681 WNTLIGGYSRNNFANESFSLFSDMLL------QFKPNTVTMTCILPAVASISSLERGREI 734

Query: 633 F-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
             Y ++  + +E S    A +VD+  + G +  A  L + +  +     +W+ ++    +
Sbjct: 735 HAYALRRGF-LEDSYTSNA-LVDMYVKCGALLVARVLFDRLTKK--NLISWTIMIAGYGM 790

Query: 692 HQNVEIGEIAAQNLFL------LEPDVASHYVLLSNIYSS---AQLWDKAMDVRKKMK 740
           H     G+ A   LF       +EPD AS   +L     S   A+ W     +RK+ K
Sbjct: 791 HG---CGKDAVA-LFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYK 844



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 179/639 (28%), Positives = 295/639 (46%), Gaps = 68/639 (10%)

Query: 11  LPSPPLSSLQTHQ-------------------------PPATTATSLPLPGSQTRCKESW 45
           + +PPLSS+ TH                          PPA             R   S 
Sbjct: 1   MATPPLSSVSTHHRAPPPWPPPKTATSPRTNFRCGVLAPPAGQVIEAAAAAPSPRNPPSR 60

Query: 46  IESLRSEARSNQFREA--ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           + S     R  +  +A  + + + +  SD      ++ AV++     + L   ++ HA V
Sbjct: 61  VLSSDVNLRIQRLCQAGDLAAALRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALV 120

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKW 161
                G+    +   LV  Y KCG D+     VFD +  +  D   W S+++   + G +
Sbjct: 121 RAGTGGIIGSVLGKRLVLAYLKCG-DLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDF 179

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFI 219
              +  FR M    V P +   VS  L C  ++    +  G  +HG    L +GE    +
Sbjct: 180 QEGVSLFRQMQCCGVSPDAHA-VSCVLKC--IASLGSITEGEVIHGLLEKLGLGE-ACAV 235

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NAL+A+Y++ G ++DA  +F S   RD +SWN+ +S    N     AV    +M   G 
Sbjct: 236 ANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGT 295

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID--------NSFVGSALVDMYCN 331
           +   V++ SVLPAC+ L     GK +H Y++++ +L D        +  +GS LV MY  
Sbjct: 296 EISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVK 355

Query: 332 CREVECGRRVFDFISDK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
           C ++   RRVFD +  K  + +WN ++ GY +    EE+L+LF +M E+ G+ P+   +S
Sbjct: 356 CGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHEL-GITPDEHALS 414

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
            ++          D    HG+ +KLG G    V NAL+  Y++   I+ +  +FD M  +
Sbjct: 415 CLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ 474

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           DT+SWN++I+G T  G + +A+ L   M     E        LD T         TL++V
Sbjct: 475 DTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE--------LDST---------TLLSV 517

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           LP C        G+ +H Y+++  L  +  + +AL+DMY+ C   +   ++F  M  +NV
Sbjct: 518 LPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNV 577

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           ++W  +I +Y   G   +V  LL+ MV +G     +KP+
Sbjct: 578 VSWTAMITSYTRAGLFDKVAGLLQEMVLDG-----IKPD 611



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 24/201 (11%)

Query: 427 LMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           L+  Y + G +  ++ +FD+M   V D   W ++++ Y   G   + + L R+MQ     
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQ----- 190

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                            P++  +  VL    +L ++ +G+ IH    +  L     V +A
Sbjct: 191 ------------CCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANA 238

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ +Y++CGC+  A +VFD M  R+ I+WN  I  Y  +G     ++L   M +EG+   
Sbjct: 239 LIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGT--- 295

Query: 605 EVKPNEVTFIALFAACSHSGM 625
             + + VT +++  AC+  G 
Sbjct: 296 --EISSVTVLSVLPACAELGF 314


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/682 (39%), Positives = 407/682 (59%), Gaps = 27/682 (3%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G  VHG  ++ G      + NAL++ YAK  R++DA  +F     RD++SWN+I+   + 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N  + +AV    +M L G + D  ++ SV+PAC        G  +H Y++R   LI  + 
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTG-LISETS 121

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           +G+AL+DMY NC +     ++F  +  K +  W AMIT Y +  + ++   LF +M  + 
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMG-LE 180

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ P+   ++S + A   +E+    + +HG+AI+ G+     V NALM+MY + G +E +
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + IFD +  +DT+SWNT+I GY+      +A  L  EM                  +L+ 
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM------------------LLQL 282

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +PN++T+  +LP   +LS+L +G+E+HAYA+R     D  V +ALVDMY KCG L  ARR
Sbjct: 283 RPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARR 342

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +FD++  +N+I+W ++I  YGMHG G++ + L + M     +G  ++P+  +F A+  AC
Sbjct: 343 LFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQM-----KGSGIQPDAGSFSAILYAC 397

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           SHSG+  EG   F  M++++ IEP   HYAC+VDLL   G +++AY+ I  MP E D + 
Sbjct: 398 SHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSS- 456

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W SLL  CRIH+NV++ E  A+ +F LEP+   +YVLL+NIY+ A+ W+    ++ K+ 
Sbjct: 457 IWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVG 516

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
             G+R+  GCSWIE   + H F A + +H Q  ++  FL++++ RM++EG+ P     L 
Sbjct: 517 GRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALM 576

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
             ++   +  LCGHS KLA+AFG+LN   G  IRV KN RVC+ CH+A KFISK+  REI
Sbjct: 577 GADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREI 636

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           ILRD  RFHHF+ G CSC  YW
Sbjct: 637 ILRDSNRFHHFEEGRCSCRGYW 658



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 213/387 (55%), Gaps = 13/387 (3%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  +H ++VKYG+G +   V N L++ Y K  + + D   VFD + ++D +SWNS+I   
Sbjct: 3   GLVVHGYLVKYGFG-AQCAVCNALISFYAK-SNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGNSLRVG 213
              G +D A+E F  M     E  S TL+SV  AC  S+ S      +G  VHG S+R G
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYS-----FIGGVVHGYSVRTG 115

Query: 214 EWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
             + T + NAL+ MY+          +F++ E +++VSW  +++S ++   F +     +
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQ 175

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L GI+PD  +I S L A +  E L  GK +H YA+RN I  +   V +AL++MY  C
Sbjct: 176 EMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIE-EVLPVANALMEMYVKC 234

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +E  R +FD ++ K    WN +I GY ++    EA  LF +M  +  L PNA TM+ +
Sbjct: 235 GYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM--LLQLRPNAVTMACI 292

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PA     +      +H +A++ G   D +V NAL+DMY + G + +++ +FD +  ++ 
Sbjct: 293 LPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNL 352

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQ 479
           +SW  MI GY + G+  DA+ L  +M+
Sbjct: 353 ISWTIMIAGYGMHGRGRDAIALFEQMK 379



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + S  R+  F +    + EM    I+PD FA  + L A AG + L  GK +H + 
Sbjct: 153 SWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYA 212

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G     + VAN L+ MY KCG  M +   +FD +T+KD +SWN++I    R    + 
Sbjct: 213 IRNGIE-EVLPVANALMEMYVKCGY-MEEARFIFDHVTKKDTISWNTLIGGYSRSNLANE 270

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNA 222
           A   F  ML   + P++ T+  +  A ++LS    L  GR++H  ++R G   + F+ NA
Sbjct: 271 AFTLFNEMLL-QLRPNAVTMACILPAAASLS---SLERGREMHAYAVRRGYLEDNFVANA 326

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G +  A+ LF    +++L+SW  +++    + +  +A+    QM   GI+PD
Sbjct: 327 LVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPD 386

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRV 341
             S +++L ACSH  + D G      A+RN+  I+      A +VD+ C+   +   +  
Sbjct: 387 AGSFSAILYACSHSGLRDEGWRFFN-AMRNEHRIEPKLKHYACMVDLLCHTGNL---KEA 442

Query: 342 FDFISDKKI----ALWNAMITG 359
           ++FI    I    ++W +++ G
Sbjct: 443 YEFIETMPIEPDSSIWVSLLRG 464


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 295/797 (37%), Positives = 456/797 (57%), Gaps = 44/797 (5%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           +L   K +HA +V     + +V ++  LVN+Y   G+     Y  FD I  +D  +WN M
Sbjct: 66  NLQSAKCLHARLV-VSNAIQNVCISAKLVNLYCYLGNVALARY-TFDHIHNRDVYAWNLM 123

Query: 152 IATLCRFGKWDLALEAFRM-MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           I+   R G     +  F + ML S ++P   T  SV  AC N++       G ++H  +L
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD------GNKIHCLAL 177

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G  W+ ++  +L+ +Y + G V +A+ LF     RD+ SWN ++S   Q+    EA+ 
Sbjct: 178 KFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT 237

Query: 270 F---LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
               LR M       D V++ S+L AC+     + G  IH+Y++++  L    FV + L+
Sbjct: 238 LSDGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLI 289

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           D+Y     ++  ++VFD +  + +  WN++I  Y  NE    A++LF +M  ++ + P+ 
Sbjct: 290 DLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR-LSRIQPDC 348

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            T+ S+     +         + G  ++ G    D  + NA++ MY+++G ++ ++ +F+
Sbjct: 349 LTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D +SWNT+I+GY   G   +A+    EM N+ EE+                 N  
Sbjct: 409 WLPNKDVISWNTIISGYAQNGFASEAI----EMYNIMEEEGG-----------EISANQG 453

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T ++VLP C    AL +G ++H   ++N L  DV VG++L DMY KCG L+ A  +F  +
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  N + WN +I  +G HG G++ + L K M+ EG     VKP+ +TF+ L +ACSHSG+
Sbjct: 514 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-----VKPDHITFVTLLSACSHSGL 568

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG   F  M+ DYGI PS  HY C+VDL GRAG++E A   I  MP + D A  W +L
Sbjct: 569 VDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD-ASIWGAL 627

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           L ACR+H NV++G+IA+++LF +EP+   ++VLLSN+Y+SA  W+   ++R      G+R
Sbjct: 628 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLR 687

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           K PG S +E  +++  F  G+ +H   E+++  L  L E+++  GYVPD   VL +V ++
Sbjct: 688 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDD 747

Query: 806 EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
           EKE +L  HSE+LA+AF ++ TP  TTIR+ KNLRVC DCH  TKFISKI  REII+RD 
Sbjct: 748 EKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 807

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFHHFKNG CSCGDYW
Sbjct: 808 NRFHHFKNGVCSCGDYW 824



 Score =  246 bits (627), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 179/624 (28%), Positives = 305/624 (48%), Gaps = 57/624 (9%)

Query: 44  SWIESLRSEARSNQFREAILSY-IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +    R+    E I  + + M  S +QPD   FP+VLKA   + D   G +IH  
Sbjct: 119 AWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCL 175

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K+G+ +  V VA +L+++Y + G+ + +   +FD +  +D  SWN+MI+  C+ G   
Sbjct: 176 ALKFGF-MWDVYVAASLIHLYCRYGAVV-NARILFDEMPTRDMGSWNAMISGYCQSGNAK 233

Query: 163 LAL---EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
            AL   +  R M        S T+VS+  AC+          G  +H  S++ G E   F
Sbjct: 234 EALTLSDGLRAM-------DSVTVVSLLSACTEAG---DFNRGVTIHSYSIKHGLESELF 283

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + N L+ +YA+ G + D + +F     RDL+SWN+I+ +   N++ L A++  ++M L  
Sbjct: 284 VSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSR 343

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I+PD +++ S+    S L  +   + +  + LR    +++  +G+A+V MY     V+  
Sbjct: 344 IQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACV 397
           R VF+++ +K +  WN +I+GY QN +  EA+ ++  MEE  G +  N  T  SV+PAC 
Sbjct: 404 RAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACS 463

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           ++ A      +HG  +K GL  D +V  +L DMY + GR++ + ++F  +   ++V WNT
Sbjct: 464 QAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNT 523

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I  +   G    A+ML +EM              LDE V   KP+ IT +T+L  C   
Sbjct: 524 LIACHGFHGHGEKAVMLFKEM--------------LDEGV---KPDHITFVTLLSACSHS 566

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGCLNFARRVFDLMPVR-NV 570
             + +G+         M+ TD  +  +L      VD+Y + G L  A      MP++ + 
Sbjct: 567 GLVDEGEWCF-----EMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDA 621

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
             W  ++ A  +HG        L  + +E     EV+P  V +  L +    S    EG+
Sbjct: 622 SIWGALLSACRVHGNVD-----LGKIASE--HLFEVEPEHVGYHVLLSNMYASAGKWEGV 674

Query: 631 DLFYKMKDDYGIEPSPDHYACVVD 654
           D    +    G+  +P   +  VD
Sbjct: 675 DEIRSITSGKGLRKTPGWSSMEVD 698


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 412/670 (61%), Gaps = 33/670 (4%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +TF+ +AL  +Y  L RVD A+ +F +    D V WNT+++ LS +    EAV    +M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             G ++PD  ++ASVLPA + +  +  G+ +H++A +   L ++  V + L+ +Y  C +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCG-LAEHEHVLTGLISLYSKCGD 262

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           VE  R +FD +    +  +NA+I+GY  N     ++ LF ++  + GLWPN++T+ +++P
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTL-GLWPNSSTLVALIP 321

Query: 395 ACVRSEAFPD--KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
             V S    D   + +HG  +K G   +  V  A+  ++ R+  +E ++  FD M  +  
Sbjct: 322 --VHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTM 379

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
            SWN MI+GY   G    A+ L  +M  +       NV          +PN IT+ + L 
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKL-------NV----------RPNPITISSTLS 422

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            C  L AL+ GK +H       L  +V V +AL+DMYAKCG ++ ARR+F+ M  +NV++
Sbjct: 423 ACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS 482

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I  YG+HG+G E L+L K+M+        + P   TF+++  ACSH G+V EG  +
Sbjct: 483 WNAMIAGYGLHGQGAEALKLYKDML-----DAHLLPTSATFLSVLYACSHGGLVEEGWKV 537

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M DDY I P  +H  C+VDLLGRAG++++A++LI+  P      G W +LLGAC +H
Sbjct: 538 FRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVH 597

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
           ++ ++ ++A+Q LF L+P+ + +YVLLSN+++S + + +A  VR++ K   + K PG + 
Sbjct: 598 KDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTL 657

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IE G++ H F+AGD +H QSE ++ +LE L+ +M + GY P+T   L++V EEEKE ++ 
Sbjct: 658 IEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVK 717

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLAIAFG+L+T PGT IR+ KNLRVC DCH ATKFISK+  R I++RD  RFHHF+
Sbjct: 718 VHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFR 777

Query: 873 NGTCSCGDYW 882
           +G CSCGDYW
Sbjct: 778 DGVCSCGDYW 787



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 283/588 (48%), Gaps = 58/588 (9%)

Query: 22  HQP--PATTATSLPLPGSQTRCKESWIESL-RSEARSNQF-REAILSYIEMTRSDIQ--- 74
           H P  PA  ATSL L  +  R     +  L R   R ++F R A+L  +   R  +    
Sbjct: 46  HYPLDPAP-ATSLLLRYASLRAPTGHLLRLFRGFPRPDRFLRNALLRSLPSLRPRLLFPC 104

Query: 75  PDNFAFPAVLKAVAGI-------QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           PD+F+F     ++A +          S  + +HA  V  GY   +  VA+ L  +Y    
Sbjct: 105 PDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTF-VASALAKLYFVL- 162

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSV 186
           S +    KVFD +   D V WN+++A L        A+E+F RM+   +V P + TL SV
Sbjct: 163 SRVDHARKVFDTVPSPDTVLWNTLLAGL----SGSEAVESFARMVCDGSVRPDATTLASV 218

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             A + ++    + +GR VH  + + G   +  ++  L+++Y+K G V+ A+ LF   E 
Sbjct: 219 LPAAAEVA---DVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEK 275

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            DLV++N ++S  S N     +V    ++   G+ P+  ++ +++P  S        + +
Sbjct: 276 PDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCL 335

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H + L++     NS V +A+  ++C   ++E  R+ FD + +K +  WNAMI+GY QN  
Sbjct: 336 HGFVLKSG-FTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGL 394

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            E A+ LF +M ++  + PN  T+SS + AC +  A    + +H    +  L  + YV  
Sbjct: 395 TEMAVALFEQMVKL-NVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMT 453

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DMY++ G I  ++ IF+ M+ ++ VSWN MI GY + GQ  +AL L ++M       
Sbjct: 454 ALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM------- 506

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--- 542
                  LD  +L   P S T ++VL  C     + +G ++     R+M   D  +    
Sbjct: 507 -------LDAHLL---PTSATFLSVLYACSHGGLVEEGWKV----FRSM-TDDYAINPGI 551

Query: 543 ---SALVDMYAKCGCLNFARRVFDLMPVRNV--ITWNVIIMAYGMHGE 585
              + +VD+  + G L  A  +    P   V    W  ++ A  +H +
Sbjct: 552 EHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKD 599


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 306/830 (36%), Positives = 475/830 (57%), Gaps = 45/830 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  ++++ R   +    A   VLK    I D   G+Q+H   VK G+  + V V   L
Sbjct: 83  EALDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTAL 141

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+MY KCG  + D   VF+ + +++ V+W S++    +       +  F  M    V P+
Sbjct: 142 VDMYMKCGG-VEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPN 200

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKT 238
            FT  SV    S ++ +  + LGR+VH  S++ G  +T F+ N+L+ MY+K G V++AK 
Sbjct: 201 PFTFTSVL---SAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKA 257

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F+  E RD+VSWNT+++ L  N+  LEA+           K    + ++V+  C++L+ 
Sbjct: 258 VFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQ 317

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI-SDKKIALWNAMI 357
           L   +++H+  L++    D + V +A++D Y  C E++    +F  +   + +  W AMI
Sbjct: 318 LALARQLHSCVLKHGFHSDGN-VMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMI 376

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            G  QN     A  LF +M E   + PN  T S+V+ A +     P    IH   IK   
Sbjct: 377 GGCIQNADIPLAAALFSRMRE-DNVKPNEFTYSTVLTASI-PILLPQ---IHAQIIKTNY 431

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA--LMLL 475
                V  AL+  YS++G  E + +IF  ++ +D V+W+ M++ Y+  G    A  + + 
Sbjct: 432 QHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIK 491

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAYAIRNM 534
             MQ M                   KPN  T+ + +  C + +A + +G++ HA +I+  
Sbjct: 492 MSMQGM-------------------KPNEFTISSAIDACASPTAGIDQGRQFHAISIKYR 532

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
               + VGSALV MYA+ G ++ AR VF+    R++++WN +I  Y  HG  +E L+  +
Sbjct: 533 YQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFR 592

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M   G     ++ +  TF+A+   C+H+G+V EG   F  M  D+ I P+ +HY+C+VD
Sbjct: 593 QMETVG-----IEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVD 647

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           L  RAGK+++   LI  MP     AGA  W +LLGACR+H+NVE+G++AAQ L LLEPD 
Sbjct: 648 LYSRAGKLDETMNLIEGMPF---PAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDD 704

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           ++ YVLLSNIY++A  W +  +VRK M    V+KE GCSWI+  +++H F+A D SH  S
Sbjct: 705 SATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLS 764

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
           EQ++  L+ ++ R+++EGY P+TS VLH++ EE+KET+L  HSE+LA+AFG++ TPP T 
Sbjct: 765 EQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTP 824

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +++ KNLRVC DCH   K +S IE REII+RD  RFHHF  G CSCGD+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 265/549 (48%), Gaps = 41/549 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    +     + +  +  M    + P+ F F +VL AVA    + LG+++HA  
Sbjct: 168 TWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQS 227

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G   S+V V N+L+NMY KCG  + +   VF ++  +D VSWN+++A L        
Sbjct: 228 VKFGC-RSTVFVCNSLINMYSKCGL-VEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F     S  + S  T  +V   C+NL +   L L RQ+H   L+ G   +  +M A
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQ---LALARQLHSCVLKHGFHSDGNVMTA 342

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +M  Y+K G +DDA  +F      +++VSW  ++    QN     A     +M    +KP
Sbjct: 343 IMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKP 402

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + ++VL A   + +     +IHA  ++ +     S VG+AL+  Y      E    +
Sbjct: 403 NEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPS-VGTALLASYSKLGNTEEALSI 457

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  I  K +  W+AM++ Y Q    + A  +FIKM  + G+ PN  T+SS + AC    A
Sbjct: 458 FKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKM-SMQGMKPNEFTISSAIDACASPTA 516

Query: 402 FPDKEGIHGHAIKLGLGRDRY-----VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             D +G   HAI +   + RY     V +AL+ MY+R G I+ ++ +F+    RD VSWN
Sbjct: 517 GID-QGRQFHAISI---KYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWN 572

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MI+GY   G   +AL   R+M+ +  E                  +  T + V+ GC  
Sbjct: 573 SMISGYAQHGYSKEALDTFRQMETVGIEM-----------------DGATFLAVIVGCTH 615

Query: 517 LSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWN 574
              + +G++   +  + + ++  +   S +VD+Y++ G L+    + + MP     + W 
Sbjct: 616 AGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWR 675

Query: 575 VIIMAYGMH 583
            ++ A  +H
Sbjct: 676 TLLGACRVH 684


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/792 (36%), Positives = 446/792 (56%), Gaps = 41/792 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K  HA ++          VA  LV  Y    S     Y VFD+  +   +  N+M+    
Sbjct: 49  KSTHAQIITNSLSTDQF-VATKLVKAYSDLRSLEAARY-VFDQFFQPKGLLCNAMLCGYL 106

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           + G++   LE F +M   N+E  S +      AC+  S  D   +G ++  +++  G E 
Sbjct: 107 QSGRYRETLELFGLMRSRNLEVDSCSCTFALKACA--SSLD-YEMGMEIISSAVEKGMEK 163

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+ +++++   K G++ +A+ +F    ++D+V WN+I+    Q   F  A     +M 
Sbjct: 164 NRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMH 223

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCN 331
             GIKP  +++ S++ AC  +  L  GK +H Y     L NDIL+  SFV     DMY  
Sbjct: 224 GSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFV-----DMYSK 278

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             ++E  R VF  +  + +  WNAMI+G  +N    E+  LF ++   +G + + TT+ S
Sbjct: 279 MGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF-DLTTIVS 337

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++  C ++ +    + +HG AI+     +  +  A++D+YS+ G ++ +  +F+ M+ R+
Sbjct: 338 LLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRN 396

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W  M+ G    G   DAL L  +MQ              +E +     NS+T ++++
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQ--------------EEGI---AANSVTFVSLV 439

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNV 570
             C  L +L +G+ IH +  R   A D+V  +ALVDMYAKCG +N A R+F    + ++V
Sbjct: 440 HSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN +I  YGMHG G + + +   M+ EG     +KPN+ TF++L +ACSHS +V +G+
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEG-----LKPNQTTFLSLLSACSHSRLVEQGI 554

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            LF  M+ D+ I P   HYAC+VDLL RAG+ E+A  LI  MP +   A    +LL  CR
Sbjct: 555 SLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTA-VLEALLSGCR 613

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
            H+N+ +G   +  L  L+      Y++LSNIY+ A+ WDK   +R  M+  G++K PG 
Sbjct: 614 THKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGY 673

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S +E G+ +H F AGD SH   E+++ FLE+L   +   GYVPDTSCVL +V+EE K  +
Sbjct: 674 SLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRM 733

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L GHSE+LAIAFG+L TP G+ IR+ KNLRVC DCH  TK+ISKI  REII+RD  RFHH
Sbjct: 734 LWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHH 793

Query: 871 FKNGTCSCGDYW 882
           F NG CSCGDYW
Sbjct: 794 FSNGECSCGDYW 805



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 257/518 (49%), Gaps = 28/518 (5%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           +S ++RE +  +  M   +++ D+ +    LKA A   D  +G +I +  V+ G   +  
Sbjct: 107 QSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRF 166

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            V +++++   K G  + +  +VFD +  KD V WNS+I    + G +D+A + F  M  
Sbjct: 167 -VGSSMISFLVKFG-KIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG 224

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGR 232
           S ++PS  T+ S+  AC  +     L+LG+ +HG  L +G  N   ++ + + MY+K+G 
Sbjct: 225 SGIKPSPITMTSLIQACGGIGN---LKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           ++ A+ +F     R+LVSWN ++S   +N    E+     ++       D  +I S+L  
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           CS    L TGK +H  A+R+     N  + +A+VD+Y  C  ++    VF+ + D+ +  
Sbjct: 342 CSQTASLATGKILHGCAIRS--FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT 399

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           W AM+ G  QN + E+AL LF +M+E  G+  N+ T  S+V +C    +      IHGH 
Sbjct: 400 WTAMLVGLAQNGHAEDALRLFAQMQE-EGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHL 458

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDA 471
            +LG   D     AL+DMY++ G+I +++ IF    + +D V WN+MITGY   G HG  
Sbjct: 459 FRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGY---GMHGHG 515

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
              +     M EE                KPN  T +++L  C     + +G  +     
Sbjct: 516 YQAVGIYHKMIEEG--------------LKPNQTTFLSLLSACSHSRLVEQGISLFNSME 561

Query: 532 RNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPVR 568
           R+     +    A LVD+ ++ G    A+ + + MP +
Sbjct: 562 RDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQ 599



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 216/421 (51%), Gaps = 22/421 (5%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P     C   W   +    ++  F  A   + EM  S I+P      ++++A  GI +L
Sbjct: 191 MPNKDVVC---WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNL 247

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
            LGK +H +V+  G G + + V  + V+MY K G D+     VF ++  ++ VSWN+MI+
Sbjct: 248 KLGKCMHGYVLGLGLG-NDILVLTSFVDMYSKMG-DIESARWVFYKMPTRNLVSWNAMIS 305

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
              R G    + + F  ++ S+      T+VS+   CS  +    L  G+ +HG ++R  
Sbjct: 306 GCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTA---SLATGKILHGCAIRSF 362

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E N  +  A++ +Y+K G +  A  +F   +DR++++W  ++  L+QN    +A+    Q
Sbjct: 363 ESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQ 422

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   GI  + V+  S++ +C+HL  L  G+ IH +  R     D   + +ALVDMY  C 
Sbjct: 423 MQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNM-TALVDMYAKCG 481

Query: 334 EVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           ++    R+F   S  K + LWN+MITGYG + +  +A+ ++ KM E  GL PN TT  S+
Sbjct: 482 KINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIE-EGLKPNQTTFLSL 540

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDD 446
           + AC  S     ++GI   ++   + RD  ++        L+D+ SR GR E ++ + + 
Sbjct: 541 LSACSHSRLV--EQGI---SLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEK 595

Query: 447 M 447
           M
Sbjct: 596 M 596


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 305/834 (36%), Positives = 453/834 (54%), Gaps = 48/834 (5%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL------SSVTVANTLVN 121
           ++RS +     ++  +LK    + DL+ GK++HA + + G  L       +  + N LV 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKCG    +  + FD I  K+  SW S++      G    ALE F  M+ + VEP   
Sbjct: 65  MYGKCGRTD-EAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRL 123

Query: 182 TLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLF 240
             ++    C  L R  DG  + RQ+    L   + +  I NAL++MY K GR+D AK LF
Sbjct: 124 VFLAALNVCGILKRLEDGAGIHRQIQDKLL---DSDLEIGNALVSMYGKCGRLDLAKQLF 180

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
              E ++++SW  +VS  ++N +  E    LR MA+ GIKPD V + ++L  CS   +LD
Sbjct: 181 DCLEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLD 240

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD---KKIALWNAMI 357
               +    +    L   + V +AL+ M+  C  V+  R +F+ ++D   + I  WNAMI
Sbjct: 241 EDSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMI 300

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           T Y      +EAL L   ++ + G+ PN  T  S + AC    +  D   +H    + G 
Sbjct: 301 TAYAHRGCSKEALFLLDSLQ-LQGVKPNCITFISSLGAC---SSLQDGRALHLLIDESGF 356

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
            R+  V NAL+ MY R G +  S  +F +M  +D  SWN+ I  +   G+  + + LL +
Sbjct: 357 DREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQ 416

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M+               E  L  +P+S+TL+T +  CG L+  +  K +H  A    L +
Sbjct: 417 MRG--------------EGGL--EPSSVTLVTAMSACGGLADPSSSKRVHERARELGLES 460

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +  V + LVDMY K G ++ AR +FD    RNV TWN +  AY   G  + VL L++ M 
Sbjct: 461 ETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQ 520

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            +G R     P+ VTF++L + C HSG++ E    F  M+ ++GI+PSP HY+CV+DLL 
Sbjct: 521 RDGYR-----PDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLA 575

Query: 658 RAGKVEDAYQLINMMPPEFDKAGA-WSSLLGACR----IHQNVEIGEIAAQNLFLLEP-- 710
           RAG+++ A   I  +      +   W +LLGACR               A ++  +EP  
Sbjct: 576 RAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPRS 635

Query: 711 --DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
             D ++ +V L+NI +++  WD+A+ +RK M E G+RKEPG S I   + +H+F+AGD  
Sbjct: 636 QHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRD 695

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H + E+++  L  L   M   GYV DT  V HNV E +K  LL  HSEKLA+AFG+L+TP
Sbjct: 696 HPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTP 755

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PG+++R+ KNLR C DCH A K IS IE REI++RD  RFHHF+NG+CSCGDYW
Sbjct: 756 PGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 246/529 (46%), Gaps = 48/529 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L +   +    +A+  + +M ++ ++PD   F A L     ++ L  G  IH  +
Sbjct: 89  SWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQI 148

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
                  S + + N LV+MYGKCG    D+ K +FD +  K+ +SW  +++     G+  
Sbjct: 149 QDKLLD-SDLEIGNALVSMYGKCGR--LDLAKQLFDCLEMKNVISWTILVSVFAENGRRR 205

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN--LSRRDGLRLGRQVHGNSLRVGEWNTFIM 220
                 R M    ++P    L+++   CS+  +   D       + G+ L   +    + 
Sbjct: 206 ETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL---DREAVVA 262

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRD---LVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            AL++M+A+ GRVD A+ +F+   D     +  WN ++++ +      EA+  L  + L+
Sbjct: 263 TALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQ 322

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS------FVGSALVDMYCN 331
           G+KP+ ++  S L ACS L+    G+ +H       +LID S       V +ALV MY  
Sbjct: 323 GVKPNCITFISSLGACSSLQ---DGRALH-------LLIDESGFDREVSVANALVTMYGR 372

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  +    ++F  +++K +A WN+ I  +  +   +E + L  +M    GL P++ T+ +
Sbjct: 373 CGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVT 432

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
            + AC         + +H  A +LGL  +  V N L+DMY + G ++ ++ IFD    R+
Sbjct: 433 AMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRN 492

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
             +WN M   Y  CG     L L+R MQ         + Y         +P+S+T +++L
Sbjct: 493 VTTWNAMAGAYRQCGVTRGVLWLVRTMQ--------RDGY---------RPDSVTFVSLL 535

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFA 558
             CG  S L +    +  A+R     D      S ++D+ A+ G L  A
Sbjct: 536 SVCGH-SGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQA 583



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 21/324 (6%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           E W   + + A     +EA+     +    ++P+   F + L A + +QD   G+ +H  
Sbjct: 294 ECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLL 350

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + + G+    V+VAN LV MYG+CGS + D  K+F  + EKD  SWNS IA     G+ D
Sbjct: 351 IDESGFD-REVSVANALVTMYGRCGS-LLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSD 408

Query: 163 LALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             ++   +M     +EPSS TLV+   AC  L+        ++VH  +  +G E  T + 
Sbjct: 409 ECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSS---SKRVHERARELGLESETCVA 465

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ MY K G VD A+ +F     R++ +WN +  +  Q       +  +R M   G +
Sbjct: 466 NGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYR 525

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGR 339
           PD V+  S+L  C H  +L+  +  +  A+R +  ID S    S ++D+     E++   
Sbjct: 526 PDSVTFVSLLSVCGHSGLLEEAR-YNFVAMRREFGIDPSPKHYSCVIDLLARAGELQ--- 581

Query: 340 RVFDFISDKKIA------LWNAMI 357
           +  DFI+   ++      +W A++
Sbjct: 582 QAEDFIARISVSSPASSPMWMALL 605


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/768 (37%), Positives = 429/768 (55%), Gaps = 39/768 (5%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKCGS + D   VF  I   + VSW  ++A   R G +  AL  +R M+   + P   
Sbjct: 1   MYGKCGS-VADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
             V     CS  S +D L+ G+ +H   L  ++ E++  +  AL+ MYA+   ++ A+  
Sbjct: 60  MFVVAIGVCS--SSKD-LKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKT 116

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---GIKPDGVSIASVLPACSHL 296
           F     + LV+WN +++  S+N     A+   + M  +   G+KPD ++ +S L ACS +
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVV 176

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             +  G+EI A  + +    D S V +AL++MY  C  +E  R+VFD + ++ +  WN M
Sbjct: 177 GDISQGREIEARTVASGYASD-SIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTM 235

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+GY +     +AL LF +M       PN  T   ++ AC   E       IH    + G
Sbjct: 236 ISGYAKQGAATQALELFQRMGP-NDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 417 LGRDRYVQNALMDMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
              D  + N L++MY++    +E ++ +F+ +  RD ++WN +I  Y   GQ  DAL + 
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           ++MQ         NV           PN ITL  VL  C  L A  +GK +HA       
Sbjct: 355 KQMQ-------LENV----------APNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             DVV+ ++L++MY +CG L+    VF  +  +++++W+ +I AY  HG  +  LE    
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWE 457

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           ++ EG     +  ++VT ++  +ACSH GM+ EG+  F  M  D+G+ P   H+ C+VDL
Sbjct: 458 LLQEG-----LAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDL 512

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP-DVAS 714
           L RAG++E A  LI+ MP   D A AW+SLL  C++H + +     A  LF LE  D  S
Sbjct: 513 LSRAGRLEAAENLIHDMPFLPD-AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHS 571

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
              LLSN+Y+ A  WD   DVRK       RK PGCS+IE  D +H+F+AGD SH + E 
Sbjct: 572 TVTLLSNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEEL 628

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           +   ++ LS++M+  GYVPD   VLHNV EEEKE +LC HSEKLAIA+G+++TPPGT + 
Sbjct: 629 IAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLH 688

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR C DCH A KFIS+I  R+I++RD  RFHHF+NG+CSC DYW
Sbjct: 689 IVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 282/593 (47%), Gaps = 56/593 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + AR+  +REA+  Y  M    ++PD   F   +   +  +DL  G+ +HA +
Sbjct: 25  SWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMI 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       + +   L+ MY +C  D+    K FD + +K  V+WN++IA   R G    
Sbjct: 85  LETQLLEFDIILGTALITMYARC-RDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRG 143

Query: 164 ALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           AL+ ++ M+  + E   P + T  S   ACS +     +  GR++   ++  G   ++ +
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACSVVG---DISQGREIEARTVASGYASDSIV 200

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NAL+ MY+K G ++ A+ +F   ++RD+++WNT++S  ++     +A+   ++M     
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNC-RE 334
           KP+ V+   +L AC++LE L+ G+ IH     +   +D++I     G+ L++MY  C   
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVI-----GNVLLNMYTKCSSS 315

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E  R+VF+ +  + +  WN +I  Y Q    ++AL +F +M ++  + PN  T+S+V+ 
Sbjct: 316 LEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQM-QLENVAPNEITLSNVLS 374

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC    A    + +H          D  ++N+LM+MY+R G ++ +  +F  +  +  VS
Sbjct: 375 ACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS 434

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W+T+I  Y    QHG +   L     + +E                  + +T+++ L  C
Sbjct: 435 WSTLIAAY---AQHGHSRTGLEHFWELLQEG--------------LAADDVTMVSTLSAC 477

Query: 515 GALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVIT 572
                L +G +     + +  LA D      +VD+ ++ G L  A  +   MP + + + 
Sbjct: 478 SHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537

Query: 573 WNVIIMAYGMHGEGQE------------------VLELLKNMVAEGSRGGEVK 607
           W  ++    +H + +                    + LL N+ AE  R  +V+
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVR 590


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 304/895 (33%), Positives = 482/895 (53%), Gaps = 60/895 (6%)

Query: 15  PLSSLQTHQP-PATTATSLPLPGSQTRCKESWIESLRSEAR------------------- 54
           P   LQT+ P P  + T  P P + +R  ++   SLR                       
Sbjct: 8   PAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLIL 67

Query: 55  ----SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
                    +A++    M    +  +   + A+L+     +  S G ++H++V K    L
Sbjct: 68  ELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRL 127

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
             V + N L++M+ + G D+ + + VF ++ E+D  SWN ++    + G +D AL  +  
Sbjct: 128 G-VRLGNALLSMFVRFG-DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHR 185

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML+  + P  +T   V   C  L     L  GR+VH + +R G E +  ++NAL+ MY K
Sbjct: 186 MLWVGIRPDVYTFPCVLRTCGGLP---DLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G +  A+ +F     RD +SWN ++S   +ND  LE +     M    + PD +++ SV
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           + AC  L     G+E+H Y ++   + + S V ++L+ M+ +    +    VF  +  K 
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVS-VNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI+GY +N   E+A+  +  ME   G+ P+  T++SV+ AC           +H
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEH-EGVVPDEITIASVLSACAGLGLLDKGIMLH 420

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             A + GL     V N+L+DMYS+   I+ +  +F  +  ++ +SW ++I G  +  +  
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF 480

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL   ++M                  +L  KPNS+TL++VL  C  + AL+ GKEIHA+
Sbjct: 481 EALFFFQQM------------------ILSLKPNSVTLVSVLSACARIGALSCGKEIHAH 522

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           A+R  L  D  + +AL+DMY +CG +  A   F+    ++V +WN+++  Y   G+G   
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLA 581

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +EL   M+       +V P+E+TF +L  ACS SGMV++G++ F  M+  + I P+  HY
Sbjct: 582 VELFHKMIES-----DVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHY 636

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           A VVDLLGRAG++EDAY+ I  MP + D A  W +LL ACRI+QNVE+GE+AAQ++F ++
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKMPIDPDPA-IWGALLNACRIYQNVELGELAAQHIFEMD 695

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
                +Y+LL N+Y+ +  WD+   VRK M+E  +  +PGCSW+E   ++H FL GD  H
Sbjct: 696 TKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFH 755

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
            Q ++++  LE   E+M   G          +++  + E + CGHSE+LAIAFG++NT P
Sbjct: 756 PQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVP 814

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD--YW 882
           GT I V KNL +C +CH   KFISK+  R I +RD  +FHHFK+G CSCGD  YW
Sbjct: 815 GTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/794 (35%), Positives = 439/794 (55%), Gaps = 98/794 (12%)

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRD 197
           R  +     +N+ I   C+ G  + A+E   M   S +E  +++  SV   C+ L S  D
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYS--SVLQLCAGLKSFTD 117

Query: 198 GLRLGRQVHGNSLRVGEW----------------------------NTFIMNALMAMYAK 229
           G ++   +  NS+ V E                             N ++ N +++ YAK
Sbjct: 118 GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 230 LGRVDDAKTLFK--------------SFE------DRDLVSWNTIVSSLSQNDKFLEAVM 269
           +G   ++  LFK              +FE      DRD++SWN+++S    N      + 
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             +QM   GI  D  +I SVL  C++   L  GK +H+ A+++      +F  + L+DMY
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF-SNTLLDMY 296

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C +++   RVF+ + ++ +  W +MI GY ++   + A+ L  +ME+  G+  +   +
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK-EGVKLDVVAI 355

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ AC RS +  + + +H +     +  + +V NALMDMY++ G +E + ++F  M V
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D +SWNTMI                                         KP+S T+  
Sbjct: 416 KDIISWNTMIG--------------------------------------ELKPDSRTMAC 437

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           VLP C +LSAL +GKEIH Y +RN  ++D  V +ALVD+Y KCG L  AR +FD++P ++
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +++W V+I  YGMHG G E +     M     R   ++P+EV+FI++  ACSHSG++ +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEM-----RDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              FY MK+D+ IEP  +HYAC+VDLL R G +  AY+ I  +P   D A  W +LL  C
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD-ATIWGALLCGC 611

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R + ++E+ E  A+ +F LEP+ + +YVLL+NIY+ A+ W++   +R+K+ + G+RK PG
Sbjct: 612 RNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPG 671

Query: 750 CSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           CSWIE   +++ F++G+  SH  S+ +   L+ +  +M++EG+ P T   L N +E +KE
Sbjct: 672 CSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKE 731

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             LCGHSEKLA+AFG+L  PP  TIRV KNLRVC DCH+  KF+SK   REI+LRD  RF
Sbjct: 732 MALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRF 791

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSC  +W
Sbjct: 792 HHFKDGYCSCRGFW 805



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 149/600 (24%), Positives = 268/600 (44%), Gaps = 116/600 (19%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS---------- 128
            + +VL+  AG++  + GK++H+ +     G+    +   LV+ Y  CG           
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDE-ALGLKLVSFYATCGDLKEGRRVFDT 159

Query: 129 ------DMWD----------------------------------VYKVFDRITEKDQVSW 148
                  +W+                                   +++FD++ ++D +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISW 219

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           NSMI+     G  +  L  ++ M+Y  ++    T++SV + C+N      L LG+ VH  
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN---SGTLSLGKAVHSL 276

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           +++   E      N L+ MY+K G +D A  +F+   +R++VSW ++++  +++ +   A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +  L+QM   G+K D V+I S+L AC+    LD GK++H Y   N+ +  N FV +AL+D
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN-MESNLFVCNALMD 395

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E    VF  +  K I  WN MI                        L P++ 
Sbjct: 396 MYAKCGSMEAANSVFSTMVVKDIISWNTMI----------------------GELKPDSR 433

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM+ V+PAC    A    + IHG+ ++ G   DR+V NAL+D+Y + G + +++ +FD +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +D VSW  MI GY + G   +A+    EM++   E                 P+ ++ 
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE-----------------PDEVSF 536

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLM 565
           +++L  C     L +G     Y ++N    +  +   + +VD+ ++ G L+ A    + +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595

Query: 566 PVR-NVITWNVIIMA-----------------YGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           P+  +   W  ++                   + +  E      LL N+ AE  +  EVK
Sbjct: 596 PIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVK 655



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/361 (35%), Positives = 185/361 (51%), Gaps = 37/361 (10%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  S+ S   SN   E  L  Y +M    I  D     +VL   A    LSLGK +H+ 
Sbjct: 218 SW-NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K  +    +  +NTL++MY KCG D+    +VF+++ E++ VSW SMIA   R G+ D
Sbjct: 277 AIKSSFE-RRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD 334

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTF 218
            A++  + M    V+     + S+  AC   +R   L  G+ VH     N++   E N F
Sbjct: 335 GAIKLLQQMEKEGVKLDVVAITSILHAC---ARSGSLDNGKDVHDYIKANNM---ESNLF 388

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MYAK G ++ A ++F +   +D++SWNT++  L                    
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL-------------------- 428

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            KPD  ++A VLPAC+ L  L+ GKEIH Y LRN    D   V +ALVD+Y  C  +   
Sbjct: 429 -KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH-VANALVDLYVKCGVLGLA 486

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD I  K +  W  MI GYG + Y  EA+  F +M + AG+ P+  +  S++ AC  
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD-AGIEPDEVSFISILYACSH 545

Query: 399 S 399
           S
Sbjct: 546 S 546


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/794 (35%), Positives = 436/794 (54%), Gaps = 98/794 (12%)

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRD 197
           R  +     +N+ I   C+ G  + A+E   M   S +E  ++   SV   C+ L S  D
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYG--SVLQLCAGLKSLTD 117

Query: 198 GLRLGRQVHGNSLRVGEW----------------------------NTFIMNALMAMYAK 229
           G ++   +  NS+ V E                             N ++ N +++ YAK
Sbjct: 118 GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 230 LG--------------------RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           +G                    R + A  LF    DRD++SWN+++S    N      + 
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             +QM   GI  D  +I SVL  C++   L  GK +H+ A+++      +F  + L+DMY
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF-SNTLLDMY 296

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C +++   RVF+ + ++ +  W +MI GY ++ + + A++L  +ME+  G+  +   +
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK-EGVKLDVVAI 355

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ AC RS +  + + +H +     +  + +V NALMDMY++ G +E + ++F  M V
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV 415

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D +SWNTM+                                         KP+S T+  
Sbjct: 416 KDIISWNTMVG--------------------------------------ELKPDSRTMAC 437

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +LP C +LSAL +GKEIH Y +RN  ++D  V +ALVD+Y KCG L  AR +FD++P ++
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +++W V+I  YGMHG G E +     M     R   ++P+EV+FI++  ACSHSG++ +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEM-----RDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              FY MK+D+ IEP  +HYAC+VDLL R G +  AY+ I  +P   D A  W +LL  C
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD-ATIWGALLCGC 611

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           RI+ ++E+ E  A+ +F LEP+   +YVLL+NIY+ A+  ++   +R+K+ + G+RK PG
Sbjct: 612 RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPG 671

Query: 750 CSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           CSWIE    ++ F++G+  SH  S+++   L+ +  +M++EGY P T   L N +E +KE
Sbjct: 672 CSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKE 731

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             LCGHSEKLA+AFG+L  PP  TIRV KNLRVC DCH+  KF+SK   REI+LRD  RF
Sbjct: 732 MALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRF 791

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSC  +W
Sbjct: 792 HHFKDGYCSCRGFW 805



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/594 (25%), Positives = 274/594 (46%), Gaps = 106/594 (17%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS---------- 128
            + +VL+  AG++ L+ GK++H+ +     G+    +   LV+ Y  CG           
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDE-ALGLKLVSFYATCGDLKEGRRVFDT 159

Query: 129 ------DMWD-----------------VYKV-----------------FDRITEKDQVSW 148
                  +W+                 ++K+                 FD++ ++D +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISW 219

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           NSMI+     G  +  L  ++ M+Y  ++    T++SV + C+N      L LG+ VH  
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN---SGTLSLGKAVHSL 276

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           +++   E      N L+ MY+K G +D A  +F+   +R++VSW ++++  +++     A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 336

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           ++ L+QM   G+K D V+I S+L AC+    LD GK++H Y   N+ +  N FV +AL+D
Sbjct: 337 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN-MASNLFVCNALMD 395

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E    VF  +  K I  WN M                      V  L P++ 
Sbjct: 396 MYAKCGSMEGANSVFSTMVVKDIISWNTM----------------------VGELKPDSR 433

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM+ ++PAC    A    + IHG+ ++ G   DR+V NAL+D+Y + G + +++ +FD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +D VSW  MI GY + G   +A+    EM++   E                 P+ ++ 
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE-----------------PDEVSF 536

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLM 565
           +++L  C     L +G     Y ++N    +  +   + +VD+ ++ G L+ A +  + +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 595

Query: 566 PVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           P+  +   W  ++    ++ + +     L   VAE  R  E++P    +  L A
Sbjct: 596 PIAPDATIWGALLCGCRIYHDIE-----LAEKVAE--RVFELEPENTGYYVLLA 642



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 209/429 (48%), Gaps = 41/429 (9%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  S+ S   SN   E  L  Y +M    I  D     +VL   A    LSLGK +H+ 
Sbjct: 218 SW-NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K  +    +  +NTL++MY KCG D+    +VF+++ E++ VSW SMIA   R G  D
Sbjct: 277 AIKSSFE-RRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSD 334

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTF 218
            A+   + M    V+     + S+  AC   +R   L  G+ VH     N++     N F
Sbjct: 335 GAIILLQQMEKEGVKLDVVAITSILHAC---ARSGSLDNGKDVHDYIKANNMAS---NLF 388

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MYAK G ++ A ++F +   +D++SWNT+V  L                    
Sbjct: 389 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL-------------------- 428

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            KPD  ++A +LPAC+ L  L+ GKEIH Y LRN    D   V +ALVD+Y  C  +   
Sbjct: 429 -KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH-VANALVDLYVKCGVLGLA 486

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD I  K +  W  MI GYG + Y  EA+  F +M + AG+ P+  +  S++ AC  
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD-AGIEPDEVSFISILYACSH 545

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
           S    ++     + +K     +  +++   ++D+ SR G +  +    + + +  D   W
Sbjct: 546 S-GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 604

Query: 456 NTMITGYTI 464
             ++ G  I
Sbjct: 605 GALLCGCRI 613


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 287/795 (36%), Positives = 448/795 (56%), Gaps = 39/795 (4%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           QDL   +QIH  +   G   ++V + N +V  YGKCGS +      FD I  K+  SW S
Sbjct: 38  QDLESVRQIHDRIS--GAASANVFLGNEIVRAYGKCGS-VASARVAFDAIARKNDYSWGS 94

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--N 208
           M+    + G +  AL+ ++ M   +++P+     +V  AC+++   + L  G+ +H   +
Sbjct: 95  MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASI---EALEEGKAIHSRIS 148

Query: 209 SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS-WNTIVSSLSQNDKFLEA 267
             +  + +  + N+L+ MYAK G ++DAK LF+    R  VS WN ++++ +Q+  F EA
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +     M    ++P   +  SVL ACS+L +LD G++IHA        +D S + +AL+ 
Sbjct: 209 IRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS-LQNALLT 264

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C+ ++   ++F  +  + +  W+AMI  + + +  +EA+  + KM+ + G+ PN  
Sbjct: 265 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ-LEGVRPNYY 323

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T +SV+ AC           +H   +  G         AL+D+Y+  G ++ ++++FD +
Sbjct: 324 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           E RD   W  +I GY+  G     L L REM+N                  +     I  
Sbjct: 384 ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKN----------------TTKVPATKIIY 427

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
             V+  C +L A A  ++ H+    + + +D V+ ++LV+MY++ G L  AR+VFD M  
Sbjct: 428 SCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSS 487

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+ + W  +I  Y  HGE    L L K M  EG+     +P+E+TF+ +  ACSH+G+  
Sbjct: 488 RDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA-----EPSELTFMVVLYACSHAGLQE 542

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G  LF  ++ DY + P+  HY+C++DLL RAG++ DA +LIN MP E +    WSSLLG
Sbjct: 543 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV-TWSSLLG 601

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           A RIH++V+    AA  +  L+P   + YVLLSN+++          VR  M   GV+K 
Sbjct: 602 ASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKR 661

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
            G SWIE  D+IH+F  GD SH + +++   L+ LS ++++ GYVP++  VLH+V E+EK
Sbjct: 662 RGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEK 721

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           E LL  HSEKLAIAFG++ T PGTT+R+   LR+C+DCH A KFIS I  REII+RD  R
Sbjct: 722 ELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSR 781

Query: 868 FHHFKNGTCSCGDYW 882
           FH F++G CSCGDYW
Sbjct: 782 FHKFRDGQCSCGDYW 796



 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 285/545 (52%), Gaps = 34/545 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + A++  +R A+  Y  M   D+QP+   +  VL A A I+ L  GK IH+ +
Sbjct: 91  SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRI 147

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV-SWNSMIATLCRFGKWD 162
                    V + N+L+ MY KCGS + D  ++F+R++ +  V SWN+MIA   + G ++
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGS-LEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFE 206

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRVGEWNTFIMN 221
              EA R+    +VEPS  T  SV  ACSNL   D    GR++H   S R  E +  + N
Sbjct: 207 ---EAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQ---GRKIHALISSRGTELDLSLQN 260

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYA+   +DDA  +F+    RD+VSW+ ++++ ++ D F EA+ F  +M L G++P
Sbjct: 261 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 320

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + ASVL AC+ +  L  G+ +H   L N   I     G+ALVD+Y +   ++  R +
Sbjct: 321 NYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI-TLVNGTALVDLYTSYGSLDEARSL 379

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I ++   LW  +I GY +  +    L L+ +M+    +       S V+ AC    A
Sbjct: 380 FDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGA 439

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F D    H      G+  D  +  +L++MYSR G +E ++ +FD M  RDT++W T+I G
Sbjct: 440 FADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAG 499

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G+HG AL L +EM+    E                 P+ +T M VL  C       
Sbjct: 500 YAKHGEHGLALGLYKEMELEGAE-----------------PSELTFMVVLYACSHAGLQE 542

Query: 522 KGKEIHAYAIRNMLAT--DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
           +GK++   +I++  A   ++   S ++D+ ++ G L+ A  + + MPV  N +TW+ ++ 
Sbjct: 543 QGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLG 601

Query: 579 AYGMH 583
           A  +H
Sbjct: 602 ASRIH 606



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 215/437 (49%), Gaps = 24/437 (5%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  R   SW   + + A+S  F EAI  Y +M   D++P    F +VL A + +  L  G
Sbjct: 184 SGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 240

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           ++IHA +   G  L  +++ N L+ MY +C   + D  K+F R+  +D VSW++MIA   
Sbjct: 241 RKIHALISSRGTEL-DLSLQNALLTMYARCKC-LDDAAKIFQRLPRRDVVSWSAMIAAFA 298

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
               +D A+E +  M    V P+ +T  SV LAC+++     LR GR VH   L  G   
Sbjct: 299 ETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG---DLRAGRAVHDQILGNGYKI 355

Query: 217 TFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           T +   AL+ +Y   G +D+A++LF   E+RD   W  ++   S+       +   R+M 
Sbjct: 356 TLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMK 415

Query: 276 LRGIKPDGVSIAS-VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                P    I S V+ AC+ L      ++ H+  +  D +I +  + ++LV+MY     
Sbjct: 416 NTTKVPATKIIYSCVISACASLGAFADARQAHS-DIEADGMISDFVLATSLVNMYSRWGN 474

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E  R+VFD +S +    W  +I GY ++     AL L+ +M E+ G  P+  T   V+ 
Sbjct: 475 LESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEM-ELEGAEPSELTFMVVLY 533

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDME 448
           AC  S A   ++   G  + + +  D  +       + ++D+ SR GR+  ++ + + M 
Sbjct: 534 AC--SHAGLQEQ---GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMP 588

Query: 449 VR-DTVSWNTMITGYTI 464
           V  + V+W++++    I
Sbjct: 589 VEPNDVTWSSLLGASRI 605


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/857 (35%), Positives = 483/857 (56%), Gaps = 52/857 (6%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  R +ES+   L   +R  + +EA   ++ +    ++ D   F +VLK  A + D   G
Sbjct: 57  SPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFG 116

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+H   +K+G+ L  V+V  +LV+ Y K GS+  D   VFD + E++ V+W ++I+   
Sbjct: 117 RQLHCQCIKFGF-LDDVSVGTSLVDTYMK-GSNFKDGRNVFDEMKERNVVTWTTLISGYA 174

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           R    +  L  F  M     +P+SFT    A A   L+       G QVH   ++ G   
Sbjct: 175 RNSLNEEVLTLFMRMQDEGTQPNSFTF---AAALGVLAEEGVGGRGLQVHTVVVKNGLDK 231

Query: 217 TF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           T  + N+L+ +Y K G V  A+ LF   E + +V+WN+++S  + N   LEA+     M 
Sbjct: 232 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 291

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           L  ++    S AS++  C++L+ L   +++H   ++   + D + + +AL+  Y  C  +
Sbjct: 292 LNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN-IRTALMVAYSKCMAM 350

Query: 336 ECGRRVFD---FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS-- 390
               R+F    F+ +  +  W AMI+G+ QN+  EEA+ LF +M+   G+ PN  T S  
Sbjct: 351 LDALRLFKETGFLGN--VVSWTAMISGFLQNDGKEEAVGLFSEMKR-KGVRPNEFTYSVI 407

Query: 391 -SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
            + +P    SE       +H   +K    R   V  AL+D Y ++G+++ +  +F  ++ 
Sbjct: 408 LTALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDN 460

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D V+W+ M+ GY   G+   A+ +  E+        +  V          KPN  T  +
Sbjct: 461 KDIVAWSAMLAGYAQAGETEAAIKIFSEL-------TKGGV----------KPNEFTFSS 503

Query: 510 VLPGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +L  C A +A + +GK+ H +AI++ L + + V SAL+ MYAK G +  A  VF     +
Sbjct: 504 ILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREK 563

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           ++++WN +I  Y  HG+  + L++ K M     +  +VK + VTFI +FAAC+H+G+V E
Sbjct: 564 DLVSWNSMISGYAQHGQAMKALDVFKEM-----KKRKVKMDSVTFIGVFAACTHAGLVEE 618

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLL 686
           G   F  M  D  I P+ +H +C+VDL  RAG++E A ++I+ MP   + AG+  W ++L
Sbjct: 619 GEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMP---NLAGSTIWRTIL 675

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
            ACR+H+  E+G +AA+ +  + P+ ++ YVLLSN+Y+ +  W +   VRK M E  V+K
Sbjct: 676 AACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 735

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           EPG SWIE  ++ + FLAGD SH   +Q++  LE+LS R++  GY PDTS VL ++++E 
Sbjct: 736 EPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH 795

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           KE +L  HSE+LAIAFG++ TP G+ + + KNLRVC DCH   K I+KIE REI++RD  
Sbjct: 796 KEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSN 855

Query: 867 RFHHF-KNGTCSCGDYW 882
           RFHHF  +G CSCGD+W
Sbjct: 856 RFHHFSSDGVCSCGDFW 872



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 27/284 (9%)

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV--VPACVR 398
           +FD   D+    + +++ G+ ++   +EA  LF+ ++ + G+  + +  SSV  V A + 
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHL-GMEMDCSIFSSVLKVSATLC 111

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            E F  +  +H   IK G   D  V  +L+D Y +    +  + +FD+M+ R+ V+W T+
Sbjct: 112 DELFGRQ--LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+GY     + + L L   MQ              DE     +PNS T    L       
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQ--------------DEGT---QPNSFTFAAALGVLAEEG 212

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
              +G ++H   ++N L   + V ++L+++Y KCG +  AR +FD   V++V+TWN +I 
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 272

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
            Y  +G   E L +  +M     R   V+ +E +F ++   C++
Sbjct: 273 GYAANGLDLEALGMFYSM-----RLNHVRLSESSFASIIKLCAN 311


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/655 (42%), Positives = 388/655 (59%), Gaps = 34/655 (5%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + DR D+ SWN++++ L++     E++     M    IKP+  +    + +CS L
Sbjct: 36  TLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L++GK+ H  AL      D  FV SAL+DMY  C ++   R +FD I  + I  W ++
Sbjct: 96  FDLNSGKQAHQQALVFGFESD-LFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154

Query: 357 ITGYGQNEYDEEALMLFIKM---------EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           ITGY QN+   EALM+F +          EEV G   ++  M SV+ AC R       EG
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEV-GTSVDSVAMISVLSACSRVSNKAVSEG 213

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +HG AIK+GL +   V+N L+D Y++ G + +S+ +FDDM  +D VSWN+MI  Y   G 
Sbjct: 214 VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGL 273

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             DA  +   M                      K N +TL T+L  C    AL  G  +H
Sbjct: 274 STDAFEVFHGMLKAGG----------------GKYNEVTLSTLLLACAHEGALRVGMCLH 317

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              I+     +V++ ++++DMY KCG    AR  FD M  +NV +W  +I  YGMHG  +
Sbjct: 318 DQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAR 377

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E L++   M+  G     VKPN +TFI++ AACSH+G + EG   F  M  +Y +EP  +
Sbjct: 378 EALDVFYQMIWAG-----VKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE 432

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY C+VDLLGRAG +++AY LI  M    D    W SLL ACRIH++VE+ EI+A+ LF 
Sbjct: 433 HYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFV-LWGSLLAACRIHKDVELAEISARELFK 491

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+P    +YVLL+NIY+ A  W     +R  +K+ G+ K PG S +E    +H FL GD 
Sbjct: 492 LDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDK 551

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
            H Q E+++ +LE LS ++++ GYVP+ + VLH+V+EEEKE ++  HSEKLA+AFG++N+
Sbjct: 552 EHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNS 611

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PG+TI V KNLRVC DCH   K ISKI SREII+RD +RFHHFK+G CSCGDYW
Sbjct: 612 IPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 222/462 (48%), Gaps = 38/462 (8%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K FDR    D  SWNS+IA L R G    +L AF  M   +++P+  T      +CS L 
Sbjct: 40  KYFDR---TDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  G+Q H  +L  G E + F+ +AL+ MY+K G++ +A+ LF     R++V+W +
Sbjct: 97  ---DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTS 153

Query: 254 IVSSLSQNDKFLEAVMFLRQMALR---------GIKPDGVSIASVLPACSHLEMLDTGKE 304
           +++   QND   EA+M  ++             G   D V++ SVL ACS +      + 
Sbjct: 154 LITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG 213

Query: 305 IHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           +H  A++  + +D    V + L+D Y  C EV   R+VFD +++K +  WN+MI  Y QN
Sbjct: 214 VHGVAIK--VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
               +A  +F  M +  G   N  T+S+++ AC    A      +H   IK+G   +  +
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIM 331

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
             +++DMY + G+ E+++  FD M+ ++  SW  MI GY + G   +AL +  +M     
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM----- 386

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVG 542
                            KPN IT ++VL  C     L +G +  +A +    +   V   
Sbjct: 387 ------------IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHY 434

Query: 543 SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMH 583
             +VD+  + G +  A  +   M V R+ + W  ++ A  +H
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 226/444 (50%), Gaps = 31/444 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   AR     E++ ++  M + DI+P+   FP  +K+ + + DL+ GKQ H   
Sbjct: 49  SWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQA 108

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           + +G+  S + V++ L++MY KCG  + +   +FD I  ++ V+W S+I    +      
Sbjct: 109 LVFGFE-SDLFVSSALIDMYSKCGK-LSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHE 166

Query: 164 ALEAFRMMLYSNVEPS---------SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
           AL  F+  L+   E +         S  ++SV  ACS +S +    +   VHG +++VG 
Sbjct: 167 ALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNK---AVSEGVHGVAIKVGL 223

Query: 215 WNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLR 272
                + N L+  YAK G V  ++ +F    ++D+VSWN++++  +QN    +A  +F  
Sbjct: 224 DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHG 283

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            +   G K + V+++++L AC+H   L  G  +H   ++    ++N  + ++++DMYC C
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG-YVNNVIMATSIIDMYCKC 342

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            + E  R  FD + +K +  W AMI GYG + +  EAL +F +M   AG+ PN  T  SV
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW-AGVKPNYITFISV 401

Query: 393 VPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           + AC  S A   +EG        H   +  G + Y    ++D+  R G I+ +  +   M
Sbjct: 402 LAAC--SHAGFLEEGWRWFNAMSHEYNVEPGVEHY--GCMVDLLGRAGYIKEAYNLIKSM 457

Query: 448 EV-RDTVSWNTMITGYTICGQHGD 470
           +V RD V W +++     C  H D
Sbjct: 458 KVRRDFVLWGSLLAA---CRIHKD 478


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/721 (37%), Positives = 413/721 (57%), Gaps = 76/721 (10%)

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG----------- 231
           LVS    C +L        GR+V      + + N ++ N +++ YAK+G           
Sbjct: 2   LVSFYATCGDLKE------GRRVFDT---MEKKNVYLWNFMVSEYAKIGDFKESICLFKI 52

Query: 232 ---------RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
                    R + A  LF    DRD++SWN+++S    N      +   +QM   GI  D
Sbjct: 53  MVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 112

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +I SVL  C+    L  GK +H+ A+++      +F  + L+DMY  C +++   RVF
Sbjct: 113 LATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINF-SNTLLDMYSKCGDLDGALRVF 171

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + ++ +  W +MI GY ++ + + A++L  +ME+  G+  +   ++S++ AC RS + 
Sbjct: 172 EKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK-EGVKLDVVAITSILHACARSGSL 230

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + + +H +     +  + +V NALMDMY++ G +E + ++F  M V+D +SWNTM+   
Sbjct: 231 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-- 288

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                                                 KP+S T+  +LP C +LSAL +
Sbjct: 289 ------------------------------------ELKPDSRTMACILPACASLSALER 312

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKEIH Y +RN  ++D  V +ALVD+Y KCG L  AR +FD++P +++++W V+I  YGM
Sbjct: 313 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 372

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E +     M     R   ++P+EV+FI++  ACSHSG++ +G   FY MK+D+ I
Sbjct: 373 HGYGNEAIATFNEM-----RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNI 427

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           EP  +HYAC+VDLL R G +  AY+ I  +P   D A  W +LL  CRI+ ++E+ E  A
Sbjct: 428 EPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD-ATIWGALLCGCRIYHDIELAEKVA 486

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + +F LEP+   +YVLL+NIY+ A+ W++   +R+K+ + G+RK PGCSWIE    ++ F
Sbjct: 487 ERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLF 546

Query: 763 LAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           ++G+  SH  S+++   L+ +  +M++EGY P T   L N +E +KE  LCGHSEKLA+A
Sbjct: 547 VSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMA 606

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+L  PP  TIRV KNLRVC DCH+  KF+SK   REI+LRD  RFHHFK+G CSC  +
Sbjct: 607 FGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGF 666

Query: 882 W 882
           W
Sbjct: 667 W 667



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 242/488 (49%), Gaps = 55/488 (11%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD++ ++D +SWNSMI+     G  +  L  ++ M+Y  ++    T++SV + C   +
Sbjct: 68  ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC---A 124

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
           +   L LG+ VH  +++   E      N L+ MY+K G +D A  +F+   +R++VSW +
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++  +++     A++ L+QM   G+K D V+I S+L AC+    LD GK++H Y   N+
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            +  N FV +AL+DMY  C  +E    VF  +  K I  WN M                 
Sbjct: 245 -MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM----------------- 286

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
                V  L P++ TM+ ++PAC    A    + IHG+ ++ G   DR+V NAL+D+Y +
Sbjct: 287 -----VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G + +++ +FD +  +D VSW  MI GY + G   +A+    EM++   E         
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE--------- 392

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAK 551
                   P+ ++ +++L  C     L +G     Y ++N    +  +   + +VD+ ++
Sbjct: 393 --------PDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSR 443

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
            G L+ A +  + +P+  +   W  ++    ++ + +     L   VAE  R  E++P  
Sbjct: 444 TGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIE-----LAEKVAE--RVFELEPEN 496

Query: 611 VTFIALFA 618
             +  L A
Sbjct: 497 TGYYVLLA 504



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/361 (34%), Positives = 182/361 (50%), Gaps = 37/361 (10%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  S+ S   SN   E  L  Y +M    I  D     +VL   A    LSLGK +H+ 
Sbjct: 80  SW-NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSL 138

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K  +    +  +NTL++MY KCG D+    +VF+++ E++ VSW SMIA   R G  D
Sbjct: 139 AIKSSFE-RRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSD 196

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTF 218
            A+   + M    V+     + S+  AC   +R   L  G+ VH     N++     N F
Sbjct: 197 GAIILLQQMEKEGVKLDVVAITSILHAC---ARSGSLDNGKDVHDYIKANNMAS---NLF 250

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MYAK G ++ A ++F +   +D++SWNT+V  L                    
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL-------------------- 290

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            KPD  ++A +LPAC+ L  L+ GKEIH Y LRN    D   V +ALVD+Y  C  +   
Sbjct: 291 -KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH-VANALVDLYVKCGVLGLA 348

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD I  K +  W  MI GYG + Y  EA+  F +M + AG+ P+  +  S++ AC  
Sbjct: 349 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD-AGIEPDEVSFISILYACSH 407

Query: 399 S 399
           S
Sbjct: 408 S 408


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/764 (37%), Positives = 440/764 (57%), Gaps = 31/764 (4%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q  C  +W   +R      QF  A+L Y++M  + + PD + FP V+KA  G++ + +GK
Sbjct: 19  QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGK 78

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H  V   G     V V ++L+ +Y + G  + D   +FD I +KD V WN M+    +
Sbjct: 79  IVHETVNLMGLK-EDVFVGSSLIKLYAENG-HLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    A++ F  M +S ++P+S T   V   C++ +  D   LG Q+HG ++  G E +
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLD---LGTQLHGIAVSCGLELD 193

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           + + N L+AMY+K   +  A+ LF +    DLVSWN I+S   QN    EA    R M  
Sbjct: 194 SPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMIS 253

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GIKPD ++ AS LP  + L  L   KEIH Y +R+ +++D  F+ SAL+D+Y  CR+VE
Sbjct: 254 AGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLD-VFLKSALIDIYFKCRDVE 312

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +++    S     +   MI+GY  N  ++EAL  F  + +   + P + T SS+ PA 
Sbjct: 313 MAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAF 371

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    + +HG  IK  L    +V +A++DMY++ GR++++  +F+ +  +D + WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MIT  +  G+ G+A+ L R+M  ME  +     YD            +++   L  C  
Sbjct: 432 SMITSCSQNGRPGEAINLFRQM-GMEGTR-----YD-----------CVSISGALSACAN 474

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  GKEIH   I+  L +D+   S+L+DMYAKCG LNF+RRVFD M  RN ++WN I
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSI 534

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I AYG HG+ +E L L   M+  G     ++P+ VTF+ + +AC H+G V EG+  ++ M
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNG-----IQPDHVTFLGIISACGHAGQVDEGIRYYHLM 589

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
            ++YGI    +HYACV D+ GRAG++++A++ IN MP   D AG W +LLGAC IH NVE
Sbjct: 590 TEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPD-AGVWGTLLGACHIHGNVE 648

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + E+A+++LF L+P  + +YVLL+N+ + A  W K + VR  MKE GVRK PG SWIE  
Sbjct: 649 LAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVN 708

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           +  H F+A DGSH  + Q++  L++L   ++KEGYVP     +H
Sbjct: 709 NATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 45/488 (9%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY + G + DAK LF + +     +WN ++   +   +F  A++F  +M   G+ PD  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 286 IASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
              V+ AC  L+ +  GK +H       L+ D+     FVGS+L+ +Y     +   + +
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDV-----FVGSSLIKLYAENGHLSDAQYL 115

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I  K   LWN M+ GY +N     A+ +F++M   + + PN+ T + V+  C     
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEIKPNSVTFACVLSVCASEAM 174

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +HG A+  GL  D  V N L+ MYS+   ++ ++ +FD     D VSWN +I+G
Sbjct: 175 LDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISG 234

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G  G+A  L R M +                    KP+SIT  + LP    L +L 
Sbjct: 235 YVQNGLMGEAEHLFRGMISAG-----------------IKPDSITFASFLPCVNELLSLK 277

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
             KEIH Y IR+ +  DV + SAL+D+Y KC  +  A+++       + +    +I  Y 
Sbjct: 278 HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYV 337

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYKMKD 638
           ++G+ +E LE  + +V E      +KP  VTF ++F A +    ++ G +L     K K 
Sbjct: 338 LNGKNKEALEAFRWLVQE-----RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           D          + ++D+  + G+++ A ++ N +  +   A  W+S++ +C   QN   G
Sbjct: 393 DEKCHVG----SAILDMYAKCGRLDLACRVFNRITEK--DAICWNSMITSCS--QNGRPG 444

Query: 699 EIAAQNLF 706
           E  A NLF
Sbjct: 445 E--AINLF 450


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/665 (40%), Positives = 389/665 (58%), Gaps = 25/665 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ +A++A Y K  RV  A+ +F    +RD V WNT+VS L +N  F EA++    M   
Sbjct: 142 FVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKG 201

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GI  D  ++A+VLP  + L+ L  G  I   A++      +++V + L  +Y  C E+E 
Sbjct: 202 GIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG-FHSHAYVITGLACLYSKCGEIET 260

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R +F  I    +  +NAMI+GY  N   E ++ LF ++  V+G   N++++  ++P   
Sbjct: 261 ARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELL-VSGEKVNSSSIVGLIPVFF 319

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                     IHG   K G+  +  V  AL  +YSR+  IE ++ +FD+   +   SWN 
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI+GY   G    A+ L +EMQ  E                  +PN +T+ ++L  C  L
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCE-----------------VRPNPVTVTSILSACAQL 422

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
            AL+ GK +H    R    +++ V +AL+DMYAKCG +  A+R+F +MP +N +TWN +I
Sbjct: 423 GALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMI 482

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             YG+HG G E L L   M+        V P  VTF+++  ACSH+G+V EG ++F  M 
Sbjct: 483 SGYGLHGYGHEALNLFNEMLHS-----RVSPTGVTFLSVLYACSHAGLVREGDEIFRSMV 537

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
            D+G EP P+HYAC+VDLLGRAG ++ A   I  MP E      W +LLGAC IH++  +
Sbjct: 538 HDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVE-PGPPVWGALLGACMIHKDANL 596

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
             +A+  LF L+P    +YVLLSNIYS+ Q + +A  VR  +K   + K PGC+ IE  +
Sbjct: 597 ARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVAN 656

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +H F +GD SH Q+  ++  LE L+ +MR+ G+  +T   LH+V EEEKE ++  HSEK
Sbjct: 657 TLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEK 716

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LAIAFG++ + PGT IR+ KNLRVC DCH ATKFISKI  R I++RD  RFHHFK+G CS
Sbjct: 717 LAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICS 776

Query: 878 CGDYW 882
           CGDYW
Sbjct: 777 CGDYW 781



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 8/353 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    +++ F EAIL + +M +  I  D+    AVL  VA +QDL+LG  I    +
Sbjct: 175 WNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+  S   V   L  +Y KCG ++     +F +I + D VS+N+MI+      + + +
Sbjct: 235 KVGFH-SHAYVITGLACLYSKCG-EIETARLLFGQIGQPDLVSYNAMISGYTCNNETESS 292

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNAL 223
           +  F+ +L S  + +S ++V +            L L R +HG   +     N+ +  AL
Sbjct: 293 VRLFKELLVSGEKVNSSSIVGLIPVFFPFGH---LHLTRCIHGFCTKSGVVSNSSVSTAL 349

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
             +Y++L  ++ A+ LF    ++ L SWN ++S  +QN    +A+   ++M    ++P+ 
Sbjct: 350 TTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNP 409

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++ S+L AC+ L  L  GK +H    R      N FV +AL+DMY  C  +   +R+F 
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRES-FESNIFVSTALIDMYAKCGSITEAQRLFS 468

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            + +K    WNAMI+GYG + Y  EAL LF +M   + + P   T  SV+ AC
Sbjct: 469 MMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH-SRVSPTGVTFLSVLYAC 520



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 2/156 (1%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  +   SW   +   A++    +AI  + EM + +++P+     ++L A A +  LSLG
Sbjct: 369 SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG 428

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K +H  + +  +  S++ V+  L++MY KCGS + +  ++F  + EK+ V+WN+MI+   
Sbjct: 429 KWVHDLINRESFE-SNIFVSTALIDMYAKCGS-ITEAQRLFSMMPEKNAVTWNAMISGYG 486

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             G    AL  F  ML+S V P+  T +SV  ACS+
Sbjct: 487 LHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSH 522


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/827 (35%), Positives = 464/827 (56%), Gaps = 33/827 (3%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           S    +A+     M    I  +   F A+++     +  S G+ +   V+     L SV 
Sbjct: 11  SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + N L++M+ + G D+ + + VF R+ E+D  SWN ++    + G +D AL  +  +L++
Sbjct: 71  LGNALLSMFVRFG-DVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWA 129

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            + P  +T  SV  +C+     D +R GR+VH + +R   + +  ++NAL+ MY K G V
Sbjct: 130 GIRPDVYTFPSVLRSCAG--AMDLVR-GREVHAHVVRFDFDMDVDVVNALITMYVKCGDV 186

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ LF     RD +SWN ++S   +ND+ LE +    +M    I PD +++ SV+ AC
Sbjct: 187 VSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L     G ++H+Y +R      N  V ++L+ MY +    +    VF  +  + +  W
Sbjct: 247 ELLGDERLGTQLHSYVVRT-AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSW 305

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
             +I+G   N   ++AL  +  ME + G  P+  T++SV+ AC           +H  A 
Sbjct: 306 TTIISGCVDNLLPDKALETYKTME-ITGTMPDEVTIASVLSACASLGQLDMGMKLHELAE 364

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           + G      V N+L+DMYS+  RIE +  IF  +  +D +SW ++I G  I  +  +AL+
Sbjct: 365 RTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALI 424

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
             R+M                  +L+ KPNS+TL++ L  C  + AL  GKEIHA+A++ 
Sbjct: 425 FFRKM------------------ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKA 466

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            +  D  + +A++D+Y +CG +  A   F+L   ++V  WN+++  Y   G+G  V+EL 
Sbjct: 467 GMGFDGFLPNAILDLYVRCGRMRTALNQFNLNE-KDVGAWNILLTGYAQKGKGAMVMELF 525

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           K MV       E+ P++VTFI+L  ACS SGMV+EG++ F +MK +Y I P+  HYACVV
Sbjct: 526 KRMVES-----EINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVV 580

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLLGRAGK+ +A++ I  MP + D A  W +LL ACRIH++V +GE+AAQ++F  + +  
Sbjct: 581 DLLGRAGKLNEAHEFIERMPIKPDPA-IWGALLNACRIHRHVLLGELAAQHIFKQDAESI 639

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
            +Y+LL N+Y+ +  WD+   VR+ MKE G+  +PGCSW+E   ++H FL+GD  H Q +
Sbjct: 640 GYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQ 699

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           +++  LE   E+M+  G+     C   +  +  K  + CGHSE+ AIA+ ++N+ PG  I
Sbjct: 700 EINVVLEGFYEKMKTSGF-NGQECSSMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPI 758

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            V KNL +C  CH   KFISKI  REI +RD  +FHHFK+G CSCGD
Sbjct: 759 WVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805



 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 173/546 (31%), Positives = 282/546 (51%), Gaps = 35/546 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  F EA+  Y  +  + I+PD + FP+VL++ AG  DL  G+++HAHV
Sbjct: 102 SWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHV 161

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V++ + +  V V N L+ MY KCG D+     +FD++  +D++SWN+MI+      +   
Sbjct: 162 VRFDFDM-DVDVVNALITMYVKCG-DVVSARMLFDKMPTRDRISWNAMISGYFENDECLE 219

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            LE F  M   +++P   T+ SV  AC  L      RLG Q+H   +R   + N  + N+
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDE---RLGTQLHSYVVRTAYDGNISVYNS 276

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMALRGI 279
           L+ MY  +G   +A+++F   E RD+VSW TI+S    N   DK LE     + M + G 
Sbjct: 277 LIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALET---YKTMEITGT 333

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD V+IASVL AC+ L  LD G ++H  A R   ++    V ++L+DMY  C+ +E   
Sbjct: 334 MPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL-YVVVANSLIDMYSKCKRIEKAL 392

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F  I DK +  W ++I G   N    EAL+ F KM  +    PN+ T+ S + AC R 
Sbjct: 393 EIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKM--ILKSKPNSVTLISALSACARV 450

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A    + IH HA+K G+G D ++ NA++D+Y R GR+  +   F+  E +D  +WN ++
Sbjct: 451 GALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNE-KDVGAWNILL 509

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           TGY    Q G   M++   + M E +                P+ +T +++L  C     
Sbjct: 510 TGY---AQKGKGAMVMELFKRMVESE--------------INPDDVTFISLLCACSRSGM 552

Query: 520 LAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           + +G E      +   +  ++   + +VD+  + G LN A    + MP++ +   W  ++
Sbjct: 553 VTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612

Query: 578 MAYGMH 583
            A  +H
Sbjct: 613 NACRIH 618



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 218/430 (50%), Gaps = 14/430 (3%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR + SW   +     +++  E +  +  M    I PD     +V+ A   + D  LG Q
Sbjct: 198 TRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQ 257

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW-DVYKVFDRITEKDQVSWNSMIATLCR 157
           +H++VV+  Y   +++V N+L+ MY   G   W +   VF  +  +D VSW ++I+    
Sbjct: 258 LHSYVVRTAYD-GNISVYNSLIQMYLSVGH--WKEAESVFSGMECRDVVSWTTIISGCVD 314

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WN 216
               D ALE ++ M  +   P   T+ SV  AC++L + D   +G ++H  + R G    
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLD---MGMKLHELAERTGHILY 371

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N+L+ MY+K  R++ A  +F    D+D++SW ++++ L  N++  EA++F R+M L
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMIL 431

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           +  KP+ V++ S L AC+ +  L  GKEIHA+AL+  +  D  F+ +A++D+Y  C  + 
Sbjct: 432 KS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFD-GFLPNAILDLYVRCGRMR 489

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
                F+ +++K +  WN ++TGY Q       + LF +M E + + P+  T  S++ AC
Sbjct: 490 TALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVE-SEINPDDVTFISLLCAC 547

Query: 397 VRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
            RS    +  E      +   +  +      ++D+  R G++  +    + M ++ D   
Sbjct: 548 SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI 607

Query: 455 WNTMITGYTI 464
           W  ++    I
Sbjct: 608 WGALLNACRI 617



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 202/442 (45%), Gaps = 26/442 (5%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+ +  L  +    +A+  L  M    I  +     +++  C +      G+ +    L 
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           + + + +  +G+AL+ M+    +V     VF  + ++ +  WN ++ GY +  + +EAL 
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           L+ ++   AG+ P+  T  SV+ +C  +        +H H ++     D  V NAL+ MY
Sbjct: 122 LYHRILW-AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMY 180

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G +  ++ +FD M  RD +SWN MI+GY    +  + L L   M+            
Sbjct: 181 VKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRE----------- 229

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                 L   P+ +T+ +V+  C  L     G ++H+Y +R     ++ V ++L+ MY  
Sbjct: 230 ------LSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLS 283

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            G    A  VF  M  R+V++W  II     +    + LE  K M   G+      P+EV
Sbjct: 284 VGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGT-----MPDEV 338

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           T  ++ +AC+  G +  GM L +++ +  G          ++D+  +  ++E A ++ + 
Sbjct: 339 TIASVLSACASLGQLDMGMKL-HELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQ 397

Query: 672 MPPEFDKAGAWSSLLGACRIHQ 693
           +P +     +W+S++   RI+ 
Sbjct: 398 IPDK--DVISWTSVINGLRINN 417


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/711 (38%), Positives = 410/711 (57%), Gaps = 55/711 (7%)

Query: 202 GRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQ 260
            +Q+H   LR    +  +++ ++++Y+ L  + D+  +F S       ++W +I+   + 
Sbjct: 24  AKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTS 83

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           +  FL ++ F  QM   G  PD     SVL +C+ ++ L  G+ +H   +R  +  D  +
Sbjct: 84  HGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD-LY 142

Query: 321 VGSALVDMYCNCREVE-----------------------------CGRRVFDFISDKKIA 351
             +AL++MY     +E                               R+VF+ +  + I 
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            WN +I+G  QN   E+ALM+  +M   A L P++ T+SSV+P           + IHG+
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGN-ADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 261

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           AI+ G   D ++ ++L+DMY++  R++ S  +F  +   D +SWN++I G    G   + 
Sbjct: 262 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L   ++M                  + + KPN ++  +++P C  L+ L  GK++H Y I
Sbjct: 322 LKFFQQM-----------------LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 364

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+    +V + SALVDMYAKCG +  AR +FD M + ++++W  +IM Y +HG   + + 
Sbjct: 365 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAIS 424

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           L K M  EG     VKPN V F+A+  ACSH+G+V E    F  M  DY I P  +HYA 
Sbjct: 425 LFKRMEVEG-----VKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAA 479

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           V DLLGR G++E+AY+ I+ M  E      WS+LL ACR+H+N+E+ E  ++ LF ++P 
Sbjct: 480 VADLLGRVGRLEEAYEFISDMHIE-PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ 538

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
               YVLLSNIYS+A  W  A  +R  M++ G++K+P CSWIE  +++H F+AGD SH  
Sbjct: 539 NIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPY 598

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
            ++++  L+ L E+M +EGYV DT+ VLH+V EE+K  LLC HSE+LAI FGI++TP GT
Sbjct: 599 YDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGT 658

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TIRV KNLRVC DCH ATKFISKI  REI++RD  RFHHFK+G CSCGD+W
Sbjct: 659 TIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/500 (31%), Positives = 250/500 (50%), Gaps = 56/500 (11%)

Query: 5   AQCL-TLLPSPPL--------SSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           AQ L T LPSP L        S+L           SLP P +      +W   +R     
Sbjct: 29  AQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTL----AWKSIIRCYTSH 84

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
             F  ++  +I+M  S   PD+  FP+VLK+   ++DL  G+ +H  +++ G G    T 
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT- 143

Query: 116 ANTLVNMYGKCGS--------------DMWDVY--------------KVFDRITEKDQVS 147
            N L+NMY K  S                 DVY              KVF+ + ++D VS
Sbjct: 144 CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 203

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN++I+   + G  + AL   R M  +++ P SFTL SV       +    L  G+++HG
Sbjct: 204 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV---LPIFAEYVNLLKGKEIHG 260

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            ++R G + + FI ++L+ MYAK  RVDD+  +F      D +SWN+I++   QN  F E
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 320

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
            + F +QM +  IKP+ VS +S++PAC+HL  L  GK++H Y +R+     N F+ SALV
Sbjct: 321 GLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR-FDGNVFIASALV 379

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           DMY  C  +   R +FD +    +  W AMI GY  + +  +A+ LF +M EV G+ PN 
Sbjct: 380 DMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM-EVEGVKPNY 438

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAI----KLGLGRDRYVQNALMDMYSRMGRIEISKT 442
               +V+ AC  +    D+   + +++    ++  G + Y   A+ D+  R+GR+E +  
Sbjct: 439 VAFMAVLTACSHA-GLVDEAWKYFNSMTQDYRIIPGLEHYA--AVADLLGRVGRLEEAYE 495

Query: 443 IFDDMEVRDTVS-WNTMITG 461
              DM +  T S W+T++  
Sbjct: 496 FISDMHIEPTGSVWSTLLAA 515



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/327 (18%), Positives = 138/327 (42%), Gaps = 60/327 (18%)

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDT 452
           P+ V+S++    + +H   ++  L     + + ++ +YS +  +  S  IF+ +     T
Sbjct: 15  PSSVKSKS--QAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTT 71

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           ++W ++I  YT  G    +L    +M    +  + N                    +VL 
Sbjct: 72  LAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHN-----------------VFPSVLK 114

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA-------------- 558
            C  +  L  G+ +H   IR  +  D+   +AL++MY+K   L                 
Sbjct: 115 SCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSD 174

Query: 559 ---------------RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
                          R+VF++MP R++++WN +I     +G  ++ L +++ M       
Sbjct: 175 VYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM-----GN 229

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
            +++P+  T  ++    +    + +G ++  Y +++ Y  +      + ++D+  +  +V
Sbjct: 230 ADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIG--SSLIDMYAKCTRV 287

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGAC 689
           +D+ ++  M+P       +W+S++  C
Sbjct: 288 DDSCRVFYMLPQH--DGISWNSIIAGC 312


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/747 (37%), Positives = 432/747 (57%), Gaps = 34/747 (4%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE----PSSFTLVSVALACSNLSRRDG 198
           ++ VSWNSMI      G  + +      M+  N +    P   TLV+V   C+   R   
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA---RERE 57

Query: 199 LRLGRQVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           + LG+ VHG ++++      ++N ALM MY+K G + +A+ +FK   ++++VSWNT+V  
Sbjct: 58  IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 117

Query: 258 LSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
            S           LRQM   G  +K D V+I + +P C H   L + KE+H Y+L+ +  
Sbjct: 118 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE-F 176

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           + N  V +A V  Y  C  +   +RVF  I  K +  WNA+I G+ Q+     +L   ++
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M+ ++GL P++ T+ S++ AC + ++    + +HG  I+  L RD +V  +++ +Y   G
Sbjct: 237 MK-ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +   + +FD ME +  VSWNT+ITGY   G    AL + R+M                 
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM----------------- 338

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
            +   +   I++M V   C  L +L  G+E HAYA++++L  D  +  +L+DMYAK G +
Sbjct: 339 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 398

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             + +VF+ +  ++  +WN +IM YG+HG  +E ++L + M   G       P+++TF+ 
Sbjct: 399 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-----NPDDLTFLG 453

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  AC+HSG++ EG+    +MK  +G++P+  HYACV+D+LGRAG+++ A +++     E
Sbjct: 454 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 513

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
               G W SLL +CRIHQN+E+GE  A  LF LEP+   +YVLLSN+Y+    W+    V
Sbjct: 514 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 573

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           R++M EM +RK+ GCSWIE   ++  F+ G+      E++      L  ++ K GY PDT
Sbjct: 574 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 633

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
             V H+++EEEK   L GHSEKLA+ +G++ T  GTTIRV KNLR+C DCH A K ISK+
Sbjct: 634 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 693

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             REI++RD +RFHHFKNG CSCGDYW
Sbjct: 694 MEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 248/527 (47%), Gaps = 34/527 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD----IQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           SW   +R  + +    E+ L   EM   +      PD      VL   A  +++ LGK +
Sbjct: 5   SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 64

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   VK       + + N L++MY KCG  + +   +F     K+ VSWN+M+      G
Sbjct: 65  HGWAVKLRLD-KELVLNNALMDMYSKCGC-ITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 122

Query: 160 KWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
                 +  R ML    +V+    T+++    C + S    L   +++H  SL+    +N
Sbjct: 123 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---KELHCYSLKQEFVYN 179

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ-NDKFLEAVMFLRQMA 275
             + NA +A YAK G +  A+ +F     + + SWN ++   +Q ND  L     L QM 
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL-QMK 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           + G+ PD  ++ S+L ACS L+ L  GKE+H + +RN  L  + FV  +++ +Y +C E+
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGEL 297

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              + +FD + DK +  WN +ITGY QN + + AL +F +M  + G+     +M  V  A
Sbjct: 298 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGA 356

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C    +       H +A+K  L  D ++  +L+DMY++ G I  S  +F+ ++ + T SW
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MI GY I G   +A+ L  EMQ                      P+ +T + VL  C 
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGH-----------------NPDDLTFLGVLTACN 459

Query: 516 ALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               + +G + +        L  ++   + ++DM  + G L+ A RV
Sbjct: 460 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 506



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 211/403 (52%), Gaps = 21/403 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K++H + +K  +  + + VAN  V  Y KCGS  +   +VF  I  K   SWN++I    
Sbjct: 165 KELHCYSLKQEFVYNEL-VANAFVASYAKCGSLSY-AQRVFHGIRSKTVNSWNALIGGHA 222

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           +     L+L+A   M  S + P SFT+ S+  ACS L     LRLG++VHG  +R   E 
Sbjct: 223 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK---SLRLGKEVHGFIIRNWLER 279

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+  +++++Y   G +   + LF + ED+ LVSWNT+++   QN     A+   RQM 
Sbjct: 280 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           L GI+  G+S+  V  ACS L  L  G+E HAYAL++ +L D++F+  +L+DMY     +
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSI 398

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               +VF+ + +K  A WNAMI GYG +   +EA+ LF +M+   G  P+  T   V+ A
Sbjct: 399 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR-TGHNPDDLTFLGVLTA 457

Query: 396 CVRSEAFPDKEGIH---GHAIKLGLGRDRYVQNALMDMYSRMGRIEIS-KTIFDDM-EVR 450
           C  S      EG+          GL  +      ++DM  R G+++ + + + ++M E  
Sbjct: 458 CNHSGLI--HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 515

Query: 451 DTVSWNTMITGYTICGQHGDALM---LLREMQNMEEEKNRNNV 490
           D   W ++++    C  H +  M   +  ++  +E EK  N V
Sbjct: 516 DVGIWKSLLSS---CRIHQNLEMGEKVAAKLFELEPEKPENYV 555



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 143/268 (53%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G +++   SW   +   A+SN  R ++ ++++M  S + PD+F   ++L A + ++ L L
Sbjct: 205 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 264

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK++H  +++  +    + V  +++++Y  CG ++  V  +FD + +K  VSWN++I   
Sbjct: 265 GKEVHGFIIR-NWLERDLFVYLSVLSLYIHCG-ELCTVQALFDAMEDKSLVSWNTVITGY 322

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
            + G  D AL  FR M+   ++    +++ V  ACS L     LRLGR+ H  +L+ + E
Sbjct: 323 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP---SLRLGREAHAYALKHLLE 379

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + FI  +L+ MYAK G +  +  +F   +++   SWN ++     +    EA+    +M
Sbjct: 380 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 439

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
              G  PD ++   VL AC+H  ++  G
Sbjct: 440 QRTGHNPDDLTFLGVLTACNHSGLIHEG 467


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 276/655 (42%), Positives = 396/655 (60%), Gaps = 35/655 (5%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + D+ ++ SWN++++ L+++   +EA+     M    +KP+  +    + +CS L
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L +G++ H  AL      D  FV SALVDMY  C E+   R +FD IS + I  W +M
Sbjct: 166 LDLHSGRQAHQQALIFGFEPD-LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 224

Query: 357 ITGYGQNEYDEEALMLFIK-MEEVAG------LWPNATTMSSVVPACVRSEAFPDKEGIH 409
           ITGY QN+    AL+LF + + E +G      +  +   M SV+ AC R       EG+H
Sbjct: 225 ITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G  IK G   D  V+N LMD Y++ G + +S+ +FD M  RD +SWN++I  Y   G   
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +++ +   M   + E N N               ++TL  VL  C    +   GK IH  
Sbjct: 345 ESMEIFHRMVK-DGEINYN---------------AVTLSAVLLACAHSGSQRLGKCIHDQ 388

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            I+  L ++V VG++++DMY KCG +  AR+ FD M  +NV +W+ ++  YGMHG  +E 
Sbjct: 389 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 448

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           LE+   M   G     VKPN +TF+++ AACSH+G++ EG   F  M  ++ +EP  +HY
Sbjct: 449 LEVFYEMNMAG-----VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY 503

Query: 650 ACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
            C+VDLLGRAG +++A+ LI  M   P+F     W +LLGACR+H+NV++GEI+A+ LF 
Sbjct: 504 GCMVDLLGRAGYLKEAFDLIKGMKLRPDFV---VWGALLGACRMHKNVDLGEISARKLFE 560

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+P    +YVLLSNIY+ A  W+    +R  MK  G+ K PG S ++    +H FL GD 
Sbjct: 561 LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDR 620

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
            H Q E+++ +LE LS ++++ GYVPD + VLH+V  EEKE +L  HSEKLA+AFGI+NT
Sbjct: 621 EHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNT 680

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PGTTI + KNLRVC DCH A KFISKI  REI++RD +RFHHF++G CSCGDYW
Sbjct: 681 VPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 228/434 (52%), Gaps = 31/434 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    EA+ ++  M +  ++P+   FP  +K+ + + DL  G+Q H   
Sbjct: 119 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 178

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           + +G+    + V++ LV+MY KCG ++ D   +FD I+ ++ VSW SMI    +      
Sbjct: 179 LIFGFE-PDLFVSSALVDMYSKCG-ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHR 236

Query: 164 ALEAFRMMLYSN----------VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
           AL  F+  L             V+P    +VSV  ACS +S +    +   VHG  ++ G
Sbjct: 237 ALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKS---ITEGVHGFLIKRG 291

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            E +  + N LM  YAK G +  ++ +F    +RD++SWN+I++  +QN    E++    
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351

Query: 273 QMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           +M   G I  + V++++VL AC+H      GK IH   ++   L  N FVG++++DMYC 
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG-LESNVFVGTSIIDMYCK 410

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C +VE  R+ FD + +K +  W+AM+ GYG + + +EAL +F +M  +AG+ PN  T  S
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM-NMAGVKPNYITFVS 469

Query: 392 VVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           V+ AC  S A   +EG H      H   +  G + Y    ++D+  R G ++ +  +   
Sbjct: 470 VLAAC--SHAGLLEEGWHWFKAMSHEFDVEPGVEHY--GCMVDLLGRAGYLKEAFDLIKG 525

Query: 447 MEVR-DTVSWNTMI 459
           M++R D V W  ++
Sbjct: 526 MKLRPDFVVWGALL 539



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 235/464 (50%), Gaps = 41/464 (8%)

Query: 136 VFDRITEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +F++  +K  V SWNS+IA L R G    AL AF  M   +++P+  T      +CS L 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  GRQ H  +L  G E + F+ +AL+ MY+K G + DA+TLF     R++VSW +
Sbjct: 167 ---DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTS 223

Query: 254 IVSSLSQNDKFLEAVMFLRQMALR--GIKPDG------VSIASVLPACSHLEMLDTGKEI 305
           +++   QND    A++  ++  +   G + DG      +++ SVL ACS +      + +
Sbjct: 224 MITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGV 283

Query: 306 HAYALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           H + ++     D+ ++N+     L+D Y  C E+   RRVFD ++++ +  WN++I  Y 
Sbjct: 284 HGFLIKRGFEGDLGVENT-----LMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QN    E++ +F +M +   +  NA T+S+V+ AC  S +    + IH   IK+GL  + 
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +V  +++DMY + G++E+++  FD M  ++  SW+ M+ GY + G   +AL +  EM   
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM--- 455

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVV 540
               N   V          KPN IT ++VL  C     L +G     A +    +   V 
Sbjct: 456 ----NMAGV----------KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE 501

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
               +VD+  + G L  A  +   M +R + + W  ++ A  MH
Sbjct: 502 HYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 309/823 (37%), Positives = 467/823 (56%), Gaps = 46/823 (5%)

Query: 73  IQPDNFAFPAVLKAVAGIQ--DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
           I PD F  P   ++   ++    + G+Q+HA   K G       V N+LV+MYG+CG  +
Sbjct: 62  IAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLP-GDPFVGNSLVSMYGRCGR-V 119

Query: 131 WDVYKVFDRITE--KDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVA 187
            D  KVF  I +  ++ VSWN+++A L   G     LE FR  L +        TLV+V 
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFED 245
             C+ L   +    GR VHG + + G W+    + NAL+ MYAK G + DA+  F   E 
Sbjct: 178 PMCAALGWSE---TGRAVHGLAAKSG-WDAPARVGNALVDMYAKCGELADAERAFP--EA 231

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---GIKPDGVSIASVLPACSHLEMLDTG 302
             +VSWN ++ + ++N +   A   LR M ++    +  D +++ SVLPACS    L   
Sbjct: 232 PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRL 291

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           +E+HA+ +R  +   +  V +ALV  Y  C  +    RVF  I  K ++ WN +I+ + Q
Sbjct: 292 RELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ 351

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
                 A+ LFI+M    GL P+  ++ S++ AC   +     +  HG  ++ GL RD  
Sbjct: 352 QN-TAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTV 410

Query: 423 VQNALMDMYSRMGRIE-ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           ++ +L+  Y R  R E +++ +FD ME +  V W  MI+GY+  G  G++L L REMQ++
Sbjct: 411 IRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSV 470

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
           E   +                + I+  + L  C  LS++  GKE+H +A++  L  D  +
Sbjct: 471 EGHCS----------------SVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFL 514

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            S+L+DMY+KCG +  AR  FD +  R+  ++W  +I  Y ++G G+E +EL   M  EG
Sbjct: 515 SSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREG 574

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY-GIEPSPDHYACVVDLLGRA 659
                ++P+E T++ L  AC H+GM+ EG+  F +M++ +  IE   +HY+CV+ +L RA
Sbjct: 575 -----MEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRA 629

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G+  DA  L+  MP E D A   SS+L AC IH   E+G   A+ L  LEPD A HYVL 
Sbjct: 630 GRFADAVALMAEMPQEPD-AKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLA 688

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SN+Y+ ++ WD    VRK +++ G+ KEPGCSWI+   +++ F+AG+  H + EQ+ G  
Sbjct: 689 SNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMW 748

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
            +L ER+R+ GYVPDT+ VLH + EEEK   L  HSEK A+ FG+L T    T+RV KN+
Sbjct: 749 RSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATVRVFKNI 808

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R+C DCH A + ISK+  R+I++RD +RFHHF+ G CSCGDYW
Sbjct: 809 RMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 302/891 (33%), Positives = 480/891 (53%), Gaps = 58/891 (6%)

Query: 15  PLSSLQTHQP-PATTATSLPLPGSQTRCKESWIESLRSEAR------------------- 54
           P   LQT+ P P  + T  P P + +R  ++   SLR                       
Sbjct: 8   PAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLIL 67

Query: 55  ----SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
                    +A++    M    +  +   + A+L+     +  S G ++H++V K    L
Sbjct: 68  ELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRL 127

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
             V + N L++M+ + G D+ + + VF ++ E+D  SWN ++    + G +D AL  +  
Sbjct: 128 G-VRLGNALLSMFVRFG-DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHR 185

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML+  + P  +T   V   C  L     L  GR+VH + +R G E +  ++NAL+ MY K
Sbjct: 186 MLWVGIRPDVYTFPCVLRTCGGLP---DLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G +  A+ +F     RD +SWN ++S   +ND  LE +     M    + PD +++ SV
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           + AC  L     G+E+H Y ++   + + S V ++L+ M+ +    +    VF  +  K 
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVS-VNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI+GY +N   E+A+  +  ME   G+ P+  T++SV+ AC           +H
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEH-EGVVPDEITIASVLSACAGLGLLDKGIMLH 420

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             A + GL     V N+L+DMYS+   I+ +  +F  +  ++ +SW ++I G  +  +  
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF 480

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL   ++M                  +L  KPNS+TL++VL  C  + AL+ GKEIHA+
Sbjct: 481 EALFFFQQM------------------ILSLKPNSVTLVSVLSACARIGALSCGKEIHAH 522

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           A+R  L  D  + +AL+DMY +CG +  A   F+    ++V +WN+++  Y   G+G   
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLA 581

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +EL   M+       +V P+E+TF +L  ACS SGMV++G++ F  M+  + I P+  HY
Sbjct: 582 VELFHKMIE-----SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHY 636

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           A VVDLLGRAG++EDAY+ I  MP + D A  W +LL ACRI+QNVE+GE+AAQ++F ++
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKMPIDPDPA-IWGALLNACRIYQNVELGELAAQHIFEMD 695

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
                +Y+LL N+Y+ +  WD+   VRK M+E  +  +PGCSW+E   ++H FL GD  H
Sbjct: 696 TKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFH 755

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
            Q ++++  LE   E+M   G          +++  + E + CGHSE+LAIAFG++NT P
Sbjct: 756 PQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVP 814

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           GT I V KNL +C +CH   KFISK+  R I +RD  +FHHFK+G CSCGD
Sbjct: 815 GTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/680 (39%), Positives = 404/680 (59%), Gaps = 27/680 (3%)

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q++   L  G ++  F++  L+   + +G V  A+ LF  F D D+  WN IV   S++ 
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            F  A+    +M +  + PDG S   VL ACS L  L+ G+ +H    R+    D  FV 
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESD-VFVQ 211

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           + LV +Y  C E+     VF  + D+ I  W ++I+GY QN    EAL +F +M +   +
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRK-TNV 270

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            P+   + SV+ A    E     + IHG  IK+GL  +  +  +L  +Y++ G + +++ 
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
            F+ +E    + WN MI+GY   G   +A+ L R M++        N+          +P
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKS-------KNI----------RP 373

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +SIT+ + +  C  + +L   + +  Y   +    DV+V ++L+D YAKCG ++ AR VF
Sbjct: 374 DSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVF 433

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D +P ++V+ W+ +++ YG+HG+G+E + L   M     R   V PN+VTF+ L  AC +
Sbjct: 434 DRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAM-----RQAGVSPNDVTFVGLLTACKN 488

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           SG+V EG DLF++M+D YGIEP   HYACVVDLLGRAG ++ AY  +  MP E      W
Sbjct: 489 SGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIE-PGVSVW 546

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            +LL AC+IH++V +GE AA+ LF L+P    HYV LSN+Y+S+ LWD    VR  M+E 
Sbjct: 547 GALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREK 606

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           G+ K  G S IE   ++  F AGD +H +S+++   +E+L  R+++ G+VP T  VLH++
Sbjct: 607 GLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDL 666

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           N EE E  LC HSE+LAIA+G+++TPPGTT+R+ KNLR C++CH A K ISK+ SREI++
Sbjct: 667 NYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVV 726

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFHHFK+G CSCGDYW
Sbjct: 727 RDACRFHHFKDGACSCGDYW 746



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 217/426 (50%), Gaps = 17/426 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R   F  AI  Y  M  + + PD F+FP VLKA + +  L +G+++H  + 
Sbjct: 141 WNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIF 200

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           ++G+  S V V N LV +Y KCG ++     VF R+ ++  VSW S+I+   + G+   A
Sbjct: 201 RHGFE-SDVFVQNGLVALYAKCG-EIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEA 258

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNAL 223
           L  F  M  +NV P    LVSV  A +++   + L  G+ +HG  +++G    F ++ +L
Sbjct: 259 LRIFSEMRKTNVRPDWIALVSVLRAYTDV---EDLEHGKSIHGCVIKMGLECEFDLLISL 315

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            ++YAK G V  A+  F   E+  L+ WN ++S   +N    EA+   R M  + I+PD 
Sbjct: 316 TSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDS 375

Query: 284 VSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +++ S + AC+ +  L+  + +  Y      RND++++ S     L+D Y  C  V+  R
Sbjct: 376 ITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS-----LIDTYAKCGSVDMAR 430

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD I DK + +W+AM+ GYG +    E+++LF  M + AG+ PN  T   ++ AC  S
Sbjct: 431 FVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQ-AGVSPNDVTFVGLLTACKNS 489

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTM 458
               +   +       G+         ++D+  R G ++ +     +M +   VS W  +
Sbjct: 490 GLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGAL 549

Query: 459 ITGYTI 464
           ++   I
Sbjct: 550 LSACKI 555



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 247/519 (47%), Gaps = 38/519 (7%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGK----QIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           S  +PD F         A + D S+ K    QI+A ++  G       +A  LVN     
Sbjct: 70  STFKPDKF--------YASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAK-LVNKASNI 120

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G ++    K+FD+  + D   WN+++    R G +  A+E +  M  + V P  F+   V
Sbjct: 121 G-EVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCV 179

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             ACS L     L +GR+VHG   R G E + F+ N L+A+YAK G +  A  +F    D
Sbjct: 180 LKACSALP---ALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVD 236

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R +VSW +I+S  +QN + +EA+    +M    ++PD +++ SVL A + +E L+ GK I
Sbjct: 237 RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSI 296

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H   ++  +  +   + S L  +Y  C  V   R  F+ + +  +  WNAMI+GY +N Y
Sbjct: 297 HGCVIKMGLECEFDLLIS-LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY 355

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            EEA+ LF ++ +   + P++ T++S + AC +  +      +  +        D  V  
Sbjct: 356 AEEAIELF-RLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT 414

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +L+D Y++ G +++++ +FD +  +D V W+ M+ GY + GQ  ++++L   M+      
Sbjct: 415 SLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVS- 473

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                           PN +T + +L  C     + +G ++        +       + +
Sbjct: 474 ----------------PNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACV 517

Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           VD+  + G L+ A      MP+   V  W  ++ A  +H
Sbjct: 518 VDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 141/265 (53%), Gaps = 10/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ Q  EA+  + EM +++++PD  A  +VL+A   ++DL  GK IH  V
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV-FDRITEKDQVSWNSMIATLCRFGKWD 162
           +K G       +  +L ++Y KCG  M  V ++ F+++     + WN+MI+   + G  +
Sbjct: 301 IKMGLE-CEFDLLISLTSLYAKCGHVM--VARLFFNQVENPSLIFWNAMISGYVKNGYAE 357

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
            A+E FR+M   N+ P S T+ S   AC+ +     L L R +    + + E+ N  I+N
Sbjct: 358 EAIELFRLMKSKNIRPDSITVTSSIAACAQIG---SLELARWM-DEYISMSEFRNDVIVN 413

Query: 222 -ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+  YAK G VD A+ +F    D+D+V W+ ++     + +  E+++    M   G+ 
Sbjct: 414 TSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVS 473

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           P+ V+   +L AC +  +++ G ++
Sbjct: 474 PNDVTFVGLLTACKNSGLVEEGWDL 498


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/713 (38%), Positives = 424/713 (59%), Gaps = 28/713 (3%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           +L+ + +  SF   + +L+ S  SR +     R +HG S+  G   +TF+ +AL  +Y K
Sbjct: 102 LLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFK 161

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
           L R DDA+ +F +    D + WNT+++ L  ++  LEA  F+R +    ++PD  ++AS 
Sbjct: 162 LSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEA-LEA--FVRMVDAGRVRPDSTTLASS 218

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L A +    +  G+ +H Y ++   L ++  V + L+ +Y  C +++  + +FD + +  
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCG-LAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPD 277

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  +NA+I+GY  N   E ++ LF ++   +G  PN++T+ +V+P             +H
Sbjct: 278 LVAYNALISGYSVNGMVESSVELFKELT-ASGWRPNSSTLVAVIPVYSPFGHELLARCLH 336

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
              +K  L  D  V  AL  +Y R+  +E +++IFD M  +   SWN MI+GY    Q+G
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGY---AQNG 393

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
              M +   Q M+E              L  +PN IT+ + L  C  L AL+ GK +H  
Sbjct: 394 LTEMAVALFQLMQE--------------LNVQPNPITISSTLSACAHLGALSLGKWVHRI 439

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
             +  L  +V V +AL+DMYAKCG +  AR +FD M  +NV++WN +I  YG+HG+G E 
Sbjct: 440 ISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEA 499

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L+L K+M+        + P   TF+++  ACSH G+V EG  +F  M ++Y I P  +H 
Sbjct: 500 LKLYKDML-----DARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHC 554

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
            C+VDLLGRAGK+ +A +LI+  P      G W +LLGAC +H+N ++ ++A+Q LF L+
Sbjct: 555 TCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELD 614

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
            + A +YVLLSN+Y+S + + +A  VR++ K   + K PGC+ IE GD  H F+AGD  H
Sbjct: 615 SENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLH 674

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
            QSE ++ +LE L+ +M + GY P T   L++V EEEKE ++  HSEKLAIAFG+L+T P
Sbjct: 675 PQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEP 734

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           GT IR+ KNLRVC DCH ATKFISK+  R I++RD  RFHHF++G CSCGDYW
Sbjct: 735 GTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 293/598 (48%), Gaps = 44/598 (7%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESL-RSEARSNQF- 58
           ++S+ + L  L +  L+S      PA  AT+L L  +  R   S +  L R+    ++F 
Sbjct: 29  LSSTPRHLDQLLAVSLASGHYALDPAP-ATALLLRYASLRAPPSHLLRLFRAFPCPDRFL 87

Query: 59  REAILSYIEMTRSDI---QPDNFAFPAVLKAVAGI-----QDLSLGKQIHAHVVKYGYGL 110
           R A+L  +   R  +    PD+F+F     +++        D +  + +H   V  GY  
Sbjct: 88  RNALLRSLPSLRPHLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYA- 146

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-R 169
           +   VA+ L  +Y K  S   D  KVFD +   D + WN+++A L        ALEAF R
Sbjct: 147 ADTFVASALAKLYFKL-SRGDDARKVFDTVPSPDTILWNTLLAGL----PGSEALEAFVR 201

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           M+    V P S TL S   A +  S    + +GR VHG  ++ G   +  ++  LM++Y+
Sbjct: 202 MVDAGRVRPDSTTLASSLRAAAEASH---MAMGRCVHGYGVKCGLAEHEHVVTGLMSLYS 258

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +D A+ LF   ++ DLV++N ++S  S N     +V   +++   G +P+  ++ +
Sbjct: 259 KCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVA 318

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           V+P  S        + +HA+ ++  +  D + V +AL  +YC   ++E  R +FD + +K
Sbjct: 319 VIPVYSPFGHELLARCLHAFVVKARLDAD-ALVSTALTTLYCRLNDMESARSIFDAMLEK 377

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNAMI+GY QN   E A+ LF  M+E+  + PN  T+SS + AC    A    + +
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFQLMQEL-NVQPNPITISSTLSACAHLGALSLGKWV 436

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H    K  L  + YV  AL+DMY++ G I  +++IFD M+ ++ VSWN MI+GY + GQ 
Sbjct: 437 HRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQG 496

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL L ++M              LD  +L   P S T ++V+  C     + +G+++  
Sbjct: 497 AEALKLYKDM--------------LDARIL---PTSSTFLSVIYACSHGGLVDEGQKVFR 539

Query: 529 YAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVRNV--ITWNVIIMAYGMH 583
                   T  +   + +VD+  + G LN A  +    P   +    W  ++ A  +H
Sbjct: 540 VMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVH 597


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/848 (35%), Positives = 470/848 (55%), Gaps = 60/848 (7%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           A+  + REA + +  M   D+   N    A ++  AG + L L    H    + G     
Sbjct: 168 AKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH----RSGLRPDC 223

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEK---------------DQVSWNSMIATLCR 157
           V+V   L+ +  K          VF+R  E+               D   WN  +++  +
Sbjct: 224 VSVRTILMGVGKK---------TVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G+   A++ FR M+ S V   S T + +    ++L+    L LG+Q+HG  +R G W+ 
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH---LELGKQIHGAVVRFG-WDQ 330

Query: 218 FI--MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           F+   N+ + MY K G V+ A+ +F   ++ DL+SWNT++S  +++     ++     + 
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390

Query: 276 LRGIKPDGVSIASVLPACSHLE-MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             G+ PD  +I SVL ACS LE     G+++H  AL+  I++D SFV +AL+D+Y    +
Sbjct: 391 RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD-SFVSTALIDVYSKGGK 449

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E    +F       +A WNAM+ G+  ++   EAL LF  M E  G   +  T ++   
Sbjct: 450 MEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE-RGEKADQITFANAAK 508

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A          + IH   IK+    D +V + ++DMY + G ++ ++ +F+ +   D V+
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W T+I+G    G+   AL    +M+                 +   +P+  T  T++  C
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMR-----------------LAGVQPDEYTFATLVKAC 611

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L+AL +GK+IHA  ++   A D  V ++LVDMYAKCG +  A  +F  M  R+V  WN
Sbjct: 612 SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWN 671

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I+    HG  +E L     M + G     V P+ VTFI + +ACSHSG+ S+    F 
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMKSRG-----VTPDRVTFIGVLSACSHSGLTSDAYKNFD 726

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M+  YG+EP  +HY+C+VD L RAG +++A ++++ MP E   A  + +LL ACR+  +
Sbjct: 727 SMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFE-ASATMYRTLLNACRVQGD 785

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
            E GE  A+ LF ++P  ++ YVLLSNIY++A  W+ A+  R  MK + V+KEPG SWI+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
             +++H F+AGD SH++++ ++  +E + +R+++EGYVPDT   L ++ EE+KE+ L  H
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYH 905

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLAIA+G++ TPP TT+RV KNLRVC DCH A K+IS +  REI+LRD  RFHHF++G
Sbjct: 906 SEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSG 965

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 966 ICSCGDYW 973



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 284/558 (50%), Gaps = 29/558 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W ++L S  ++ +  EA+  + +M +S +  D+  +  +L  VA +  L LGKQIH  VV
Sbjct: 265 WNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVV 324

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           ++G+    V+VAN+ +NMY K GS  +   ++F ++ E D +SWN++I+   R G  + +
Sbjct: 325 RFGWD-QFVSVANSAINMYVKAGSVNY-ARRMFGQMKEVDLISWNTVISGCARSGLEECS 382

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F  +L S + P  FT+ SV  ACS+L   +   +GRQVH  +L+ G   ++F+  AL
Sbjct: 383 LRLFIDLLRSGLLPDQFTITSVLRACSSL--EESYCVGRQVHTCALKAGIVLDSFVSTAL 440

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + +Y+K G++++A+ LF + +  DL SWN ++   + +D + EA+     M  RG K D 
Sbjct: 441 IDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ 500

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++ A+   A   L  L  GK+IHA  ++     D  FV S ++DMY  C E++  R+VF+
Sbjct: 501 ITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYD-LFVISGILDMYLKCGEMKSARKVFN 559

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I       W  +I+G  +N  +E+AL  + +M  +AG+ P+  T +++V AC    A  
Sbjct: 560 QIPSPDDVAWTTVISGCVENGEEEQALFTYHQM-RLAGVQPDEYTFATLVKACSLLTALE 618

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IH + +KL    D +V  +L+DMY++ G IE +  +F  M  R    WN MI G  
Sbjct: 619 QGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL- 677

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              QHG+A     E  N   E     V           P+ +T + VL  C      +  
Sbjct: 678 --AQHGNA----EEALNFFNEMKSRGV----------TPDRVTFIGVLSACSHSGLTSDA 721

Query: 524 -KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVIIMAYG 581
            K   +      +  ++   S LVD  ++ G +  A +V   MP     T +  ++ A  
Sbjct: 722 YKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781

Query: 582 MHGE---GQEVLELLKNM 596
           + G+   G+ V E L  M
Sbjct: 782 VQGDKETGERVAEKLFTM 799



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 192/766 (25%), Positives = 325/766 (42%), Gaps = 127/766 (16%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
           S + P  F+   +L+      DL LGK+ HA +V  G       V N L+ MY KCGS +
Sbjct: 10  SSLLPQWFS---ILRHAIADSDLILGKRTHAVIVTSGLNPDRY-VTNNLITMYAKCGS-L 64

Query: 131 WDVYKVFDRI--TEKDQVSWNSMIATLCRFG------KWDLALEAFRMMLYSNVEPSSFT 182
           +   K+FD    +++D V++N+++A     G      K   A   FR++  S +  +  T
Sbjct: 65  FSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHT 124

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           L  +   C              + G ++++G +W+ F+  AL+ +YAK  R+ +A+ LF 
Sbjct: 125 LSPLFKLCLLYGSPSA---SEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               RD+V WN ++ +  +     E +         G++PD VS+ ++L       + + 
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241

Query: 302 G-KEIHAYALR-------NDILIDNSFVGSAL--------VDMY---------------- 329
             +++ AYA +       +D+ + N  + S L        VD +                
Sbjct: 242 ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301

Query: 330 ------CNCREVECGRR----VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
                  +   +E G++    V  F  D+ +++ N+ I  Y +      A  +F +M+EV
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361

Query: 380 ------------------------------AGLWPNATTMSSVVPACVR-SEAFPDKEGI 408
                                         +GL P+  T++SV+ AC    E++     +
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  A+K G+  D +V  AL+D+YS+ G++E ++ +F + +  D  SWN M+ G+T+   +
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL L   M    E                 K + IT        G L  L +GK+IHA
Sbjct: 482 REALRLFSLMHERGE-----------------KADQITFANAAKAAGCLVRLQQGKQIHA 524

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
             I+     D+ V S ++DMY KCG +  AR+VF+ +P  + + W  +I     +GE ++
Sbjct: 525 VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQ 584

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPD 647
            L     M   G     V+P+E TF  L  ACS    + +G  +    MK +   +P   
Sbjct: 585 ALFTYHQMRLAG-----VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV- 638

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
               +VD+  + G +EDAY L   M         W++++     H N E     A N F 
Sbjct: 639 -MTSLVDMYAKCGNIEDAYGLFRRMNTR--SVALWNAMIVGLAQHGNAE----EALNFFN 691

Query: 708 ------LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
                 + PD  +   +LS    S    D   +     K  GV  E
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 219/434 (50%), Gaps = 20/434 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD-LSLGKQIHAH 102
           SW   +   ARS     ++  +I++ RS + PD F   +VL+A + +++   +G+Q+H  
Sbjct: 365 SWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTC 424

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K G  L S  V+  L+++Y K G  M +   +F      D  SWN+M+        + 
Sbjct: 425 ALKAGIVLDSF-VSTALIDVYSK-GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL  F +M     +    T  + A A   L R   L+ G+Q+H   +++   ++ F+++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVR---LQQGKQIHAVVIKMRFHYDLFVIS 539

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MY K G +  A+ +F      D V+W T++S   +N +  +A+    QM L G++P
Sbjct: 540 GILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQP 599

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  + A+++ ACS L  L+ GK+IHA  ++ +   D  FV ++LVDMY  C  +E    +
Sbjct: 600 DEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD-PFVMTSLVDMYAKCGNIEDAYGL 658

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----V 397
           F  ++ + +ALWNAMI G  Q+   EEAL  F +M+   G+ P+  T   V+ AC    +
Sbjct: 659 FRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKS-RGVTPDRVTFIGVLSACSHSGL 717

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
            S+A+ + + +       G+  +    + L+D  SR G I+ ++ +   M    + + + 
Sbjct: 718 TSDAYKNFDSMQK---TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYR 774

Query: 457 TMITGYTICGQHGD 470
           T++     C   GD
Sbjct: 775 TLLNA---CRVQGD 785


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/678 (39%), Positives = 400/678 (58%), Gaps = 26/678 (3%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+     +G    A+ LF +    D  + +T++S+ +      EA+     +  RGIKP 
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
                +V  AC         KE+H  A+R  ++ D +F+G+AL+  Y  C+ VE  RRVF
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSD-AFLGNALIHAYGKCKCVEGARRVF 190

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  K +  W +M + Y         L +F +M    G+ PN+ T+SS++PAC   +  
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGW-NGVKPNSVTLSSILPACSELKDL 249

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IHG A++ G+  + +V +AL+ +Y+R   ++ ++ +FD M  RD VSWN ++T Y
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309

Query: 463 TICGQHGDALMLLREMQN-----------------MEEEKNRNNVYDLDETV-LRPKPNS 504
               ++   L L  +M +                 ME  +    V  L +   L  KPN 
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQ 369

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           IT+ + LP C  L +L  GKE+H Y  R+ L  D+   +ALV MYAKCG LN +R VFD+
Sbjct: 370 ITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDM 429

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  ++V+ WN +I+A  MHG G+EVL L ++M+  G     +KPN VTF  + + CSHS 
Sbjct: 430 ICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSG-----IKPNSVTFTGVLSGCSHSR 484

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG+ +F  M  D+ +EP  +HYAC+VD+  RAG++ +AY+ I  MP E   A AW +
Sbjct: 485 LVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME-PTASAWGA 543

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLGACR+++NVE+ +I+A  LF +EP+   +YV L NI  +A+LW +A + R  MKE G+
Sbjct: 544 LLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGI 603

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
            K PGCSW++ GD +H F+ GD ++ +S++++ FL+ L E+M+  GY PDT  VL ++++
Sbjct: 604 TKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQ 663

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           EEK   LC HSEKLA+AFGILN    ++IRV KNLR+C DCH A K++SK+    II+RD
Sbjct: 664 EEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRD 723

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHF+NG CSC D W
Sbjct: 724 SLRFHHFRNGNCSCQDLW 741



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 214/443 (48%), Gaps = 55/443 (12%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EAI  Y  +    I+P N  F  V KA     D S  K++H   ++ G  +S   + N L
Sbjct: 115 EAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGM-MSDAFLGNAL 173

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ YGKC   +    +VFD +  KD VSW SM +     G   L L  F  M ++ V+P+
Sbjct: 174 IHAYGKCKC-VEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPN 232

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
           S TL S+  ACS L     L+ GR +HG ++R G   N F+ +AL+++YA+   V  A+ 
Sbjct: 233 SVTLSSILPACSELK---DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARL 289

Query: 239 LFKSFEDRDLVSWNTIVSSLSQN---DKFL------------------------------ 265
           +F     RD+VSWN ++++   N   DK L                              
Sbjct: 290 VFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQ 349

Query: 266 --EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             +AV  LR+M   G KP+ ++I+S LPACS LE L  GKE+H Y  R+  LI +    +
Sbjct: 350 TEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRH-WLIGDLTTMT 408

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           ALV MY  C ++   R VFD I  K +  WN MI     +    E L+LF  M + +G+ 
Sbjct: 409 ALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ-SGIK 467

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRI 437
           PN+ T + V+  C  S     +EG+    I   +GRD  V+        ++D++SR GR+
Sbjct: 468 PNSVTFTGVLSGCSHSRLV--EEGLQ---IFNSMGRDHLVEPDANHYACMVDVFSRAGRL 522

Query: 438 EISKTIFDDMEVRDTVS-WNTMI 459
             +      M +  T S W  ++
Sbjct: 523 HEAYEFIQRMPMEPTASAWGALL 545



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 263/557 (47%), Gaps = 69/557 (12%)

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D     ++FD I + D  + +++I+     G  + A+  +  +    ++P +   ++VA 
Sbjct: 81  DFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAK 140

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC   +  D  R+ ++VH +++R G   + F+ NAL+  Y K   V+ A+ +F     +D
Sbjct: 141 ACG--ASGDASRV-KEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKD 197

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSW ++ S           +    +M   G+KP+ V+++S+LPACS L+ L +G+ IH 
Sbjct: 198 VVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHG 257

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN-EYD 366
           +A+R+  +I+N FV SALV +Y  C  V+  R VFD +  + +  WN ++T Y  N EYD
Sbjct: 258 FAVRHG-MIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYD 316

Query: 367 ----------------------------------EEALMLFIKMEEVAGLWPNATTMSSV 392
                                             E+A+ +  KM+ + G  PN  T+SS 
Sbjct: 317 KGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNL-GFKPNQITISSF 375

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PAC   E+    + +H +  +  L  D     AL+ MY++ G + +S+ +FD +  +D 
Sbjct: 376 LPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDV 435

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V+WNTMI    + G   + L+L   M              L   +   KPNS+T   VL 
Sbjct: 436 VAWNTMIIANAMHGNGREVLLLFESM--------------LQSGI---KPNSVTFTGVLS 478

Query: 513 GCGALSALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           GC     + +G +I     R+ L   D    + +VD++++ G L+ A      MP+    
Sbjct: 479 GCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTA 538

Query: 572 T-WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV-TFIALFAACSHSGMVSEG 629
           + W  ++ A  ++      +EL K      ++  E++PN    +++LF     + + SE 
Sbjct: 539 SAWGALLGACRVYKN----VELAK---ISANKLFEIEPNNPGNYVSLFNILVTAKLWSEA 591

Query: 630 MDLFYKMKDDYGIEPSP 646
            +    MK+  GI  +P
Sbjct: 592 SEARILMKER-GITKTP 607



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 45/309 (14%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           R  +  + EM  + ++P++    ++L A + ++DL  G+ IH   V++G  + +V V + 
Sbjct: 215 RLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM-IENVFVCSA 273

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE- 177
           LV++Y +C S +     VFD +  +D VSWN ++       ++D  L  F  M    VE 
Sbjct: 274 LVSLYARCLS-VKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEA 332

Query: 178 ----------------------------------PSSFTLVSVALACSNLSRRDGLRLGR 203
                                             P+  T+ S   ACS L   + LR+G+
Sbjct: 333 DEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSIL---ESLRMGK 389

Query: 204 QVHGNSLR---VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           +VH    R   +G+  T  M AL+ MYAK G ++ ++ +F     +D+V+WNT++ + + 
Sbjct: 390 EVHCYVFRHWLIGDLTT--MTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAM 447

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           +    E ++    M   GIKP+ V+   VL  CSH  +++ G +I     R+ ++  ++ 
Sbjct: 448 HGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDAN 507

Query: 321 VGSALVDMY 329
             + +VD++
Sbjct: 508 HYACMVDVF 516



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 7/195 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +     + Q  +A+    +M     +P+     + L A + ++ L +GK++H +V
Sbjct: 336 TWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYV 395

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            ++ + +  +T    LV MY KCG D+     VFD I  KD V+WN+MI      G    
Sbjct: 396 FRH-WLIGDLTTMTALVYMYAKCG-DLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGRE 453

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR--RDGLRLGRQVHGNSLRVGEWNTFIMN 221
            L  F  ML S ++P+S T   V   CS+ SR   +GL++   +  + L   + N +   
Sbjct: 454 VLLLFESMLQSGIKPNSVTFTGVLSGCSH-SRLVEEGLQIFNSMGRDHLVEPDANHYA-- 510

Query: 222 ALMAMYAKLGRVDDA 236
            ++ ++++ GR+ +A
Sbjct: 511 CMVDVFSRAGRLHEA 525


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 286/791 (36%), Positives = 452/791 (57%), Gaps = 37/791 (4%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK +H H++K G  L  +   N L+N Y +  S + D  K+FD + + + +S+ ++    
Sbjct: 54  GKHLHCHILKRGTSLD-LFAQNILLNFYVQSNS-LQDASKLFDEMPQTNTISFVTLAQGY 111

Query: 156 CRFGKWDLALEAFRMMLYSN---VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
            R  ++  AL  F + ++     V P  FT +   L   +L+      L   +H    ++
Sbjct: 112 SRDHQFHQALH-FILRIFKEGHEVNPFVFTTLLKLLVSMDLAH-----LCWTLHACVYKL 165

Query: 213 GEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   + F+  AL+  Y+  G VD A+ +F     +D+VSW  +V+  ++N  + E++   
Sbjct: 166 GHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLF 225

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            QM + G KP+  +I+  L +C  LE  + GK +H  AL+      + FVG AL+++Y  
Sbjct: 226 NQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKG-CYDHDLFVGIALLELYAK 284

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             E+   +R+F+ +    +  W+ MI  Y Q++  +EAL LF++M + + + PN  T +S
Sbjct: 285 SGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVV-PNNFTFAS 343

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ AC  S +    + IH   +K GL  + +V NA+MD+Y++ G IE S  +F+++  R+
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+WNT+I GY   G    A+ L   M  +E +                +P  +T  +VL
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHM--LEHDM---------------QPTEVTYSSVL 446

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
               +L+AL  G +IH+  I+ M   D VV ++L+DMYAKCG +N AR  FD M  R+ +
Sbjct: 447 RASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEV 506

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WN +I  Y MHG   E L L   M     +  + KPN++TF+ + +ACS++G++ +G  
Sbjct: 507 SWNAMICGYSMHGMSMEALNLFDMM-----QHTDCKPNKLTFVGVLSACSNAGLLYKGQA 561

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M  DY I+P  +HY C+V LLGR G+ ++A +LI  +  +      W +LLGAC I
Sbjct: 562 HFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQ-PSVMVWRALLGACVI 620

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+ V++G + AQ++  +EP   + +VLLSN+Y++A  WD    VRK M++  VRKEPG S
Sbjct: 621 HKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLS 680

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W+E    +H F  GD SH   + +   LE L+++ R  GYVPD + VL +V ++EKE  L
Sbjct: 681 WVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHL 740

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LA+A+G++ TP   +IR+ KNLR+C DCH   K ISK+  REI++RD+ RFHHF
Sbjct: 741 WVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHF 800

Query: 872 KNGTCSCGDYW 882
           ++G CSCGDYW
Sbjct: 801 RHGVCSCGDYW 811



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 243/483 (50%), Gaps = 27/483 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++   +  +R +QF +A+   + + +   + + F F  +LK +  +    L   +HA V
Sbjct: 103 SFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACV 162

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
            K G+  +   V   L++ Y   G+   DV + VFD I  KD VSW  M+A       ++
Sbjct: 163 YKLGHH-ADAFVGTALIDAYSVRGN--VDVARHVFDDICCKDMVSWTGMVACYAENCFYE 219

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMN 221
            +L+ F  M     +P++FT+     +C  L   +   +G+ VHG +L+   + + F+  
Sbjct: 220 ESLQLFNQMRIMGYKPNNFTISGALKSCLGL---EAFNVGKSVHGCALKGCYDHDLFVGI 276

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ +YAK G + DA+ LF+     DL+ W+ +++  +Q+D+  EA+    +M    + P
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVP 336

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + ASVL AC+    LD GK+IH+  L+   L  N FV +A++D+Y  C E+E   ++
Sbjct: 337 NNFTFASVLQACASSVSLDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYAKCGEIENSMKL 395

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ + D+    WN +I GY Q    E A+ LF  M E   + P   T SSV+ A     A
Sbjct: 396 FEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLE-HDMQPTEVTYSSVLRASASLAA 454

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IH   IK    +D  V N+L+DMY++ GRI  ++  FD M  RD VSWN MI G
Sbjct: 455 LEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICG 514

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y++ G   +AL L   MQ+ +                  KPN +T + VL  C     L 
Sbjct: 515 YSMHGMSMEALNLFDMMQHTD-----------------CKPNKLTFVGVLSACSNAGLLY 557

Query: 522 KGK 524
           KG+
Sbjct: 558 KGQ 560



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 10/359 (2%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK+  SW   +   A +  + E++  + +M     +P+NF     LK+  G++  ++GK 
Sbjct: 199 CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKS 258

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H   +K  Y    + V   L+ +Y K G ++ D  ++F+ + + D + W+ MIA   + 
Sbjct: 259 VHGCALKGCYD-HDLFVGIALLELYAKSG-EIIDAQRLFEEMPKTDLIPWSLMIARYAQS 316

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            +   AL+ F  M  ++V P++FT  SV  AC++    D   LG+Q+H   L+ G   N 
Sbjct: 317 DRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD---LGKQIHSCVLKFGLNSNV 373

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NA+M +YAK G ++++  LF+   DR+ V+WNTI+    Q      A+     M   
Sbjct: 374 FVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEH 433

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            ++P  V+ +SVL A + L  L+ G +IH+  ++  +   ++ V ++L+DMY  C  +  
Sbjct: 434 DMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKT-MYNKDTVVANSLIDMYAKCGRIND 492

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            R  FD ++ +    WNAMI GY  +    EAL LF  M+      PN  T   V+ AC
Sbjct: 493 ARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQH-TDCKPNKLTFVGVLSAC 550


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 280/794 (35%), Positives = 437/794 (55%), Gaps = 98/794 (12%)

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRD 197
           R  +     +N+ I   C+ G  + A+E   M   S +E  ++   SV   C+ L S  D
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYG--SVLQLCAGLKSFTD 117

Query: 198 GLRLGRQVHGNSLRVG----------------------------EWNTFIMNALMAMYAK 229
           G ++   +  NS+ V                             + N ++ N +++ YAK
Sbjct: 118 GKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 230 LGRVDDAKTLFK--------------SFE------DRDLVSWNTIVSSLSQNDKFLEAVM 269
           +G   ++  LFK              +FE      DRD++SWN+++S    N      + 
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             +QM   GI  D  +I SVL  C++   L  GK +H+ A+++      +F  + L+DMY
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF-SNTLLDMY 296

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C +++   RVF+ + ++ +  W +MI GY ++   + A+ L  +ME+  G+  +   +
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK-EGVKLDVVAI 355

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ AC RS +  + + +H +     +  + +V NALMDMY++ G +E + ++F  M V
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D +SWNTMI                                         KP+S T+  
Sbjct: 416 KDIISWNTMIG--------------------------------------ELKPDSRTMAC 437

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           VLP C +LSAL +GKEIH Y +RN  ++D  V +ALVD+Y KCG L  AR +FD++P ++
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +++W V+I  YGMHG G E +     M     R   ++P+EV+FI++  ACSHSG++ +G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEM-----RDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
              FY MK+D+ IEP  +HYAC+VDLL R G +  AY+ +  +P   D A  W +LL  C
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPD-ATIWGALLCGC 611

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R + ++E+ E  A+ +F LEP+   +YVLL+NIY+ A+ W++   +R+K+ + G+RK PG
Sbjct: 612 RNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPG 671

Query: 750 CSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           CSWIE   +++ F++G+  SH  S+ +   L+ +  +M++EG+ P T   L N +E +KE
Sbjct: 672 CSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKE 731

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             LCGHSEKLA+AFG+L  PP  TIRV KNLRVC DCH+  KF+SK   REI+LRD  RF
Sbjct: 732 MALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRF 791

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSC  +W
Sbjct: 792 HHFKDGYCSCRGFW 805



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 158/670 (23%), Positives = 291/670 (43%), Gaps = 131/670 (19%)

Query: 22  HQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM------------- 68
           H+P   T    P+  S    + S   +   + +   +   IL + ++             
Sbjct: 33  HKPSLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMC 92

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            +S+++   +   +VL+  AG++  + GK++H+ +     G+    +   LV+ Y  CG 
Sbjct: 93  QKSELETKTYG--SVLQLCAGLKSFTDGKKVHSIIKSNSVGVDG-ALGLKLVSFYATCGD 149

Query: 129 ----------------DMWD----------------------------------VYKVFD 138
                            +W+                                   +++FD
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFD 209

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           ++ ++D +SWNSMI+     G  +  L  ++ M+Y  ++    T++SV + C+N      
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN---SGT 266

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L LG+ VH  +++   E      N L+ MY+K G +D A  +F+   +R++VSW ++++ 
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +++ +   A+  L+QM   G+K D V+I S+L AC+    LD GK++H Y   N+ +  
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN-MES 385

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N FV +AL+DMY  C  +E    VF  +  K I  WN MI                    
Sbjct: 386 NLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------------------- 425

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
               L P++ TM+ V+PAC    A    + IHG+ ++ G   DR+V NAL+D+Y + G +
Sbjct: 426 --GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            +++ +FD +  +D VSW  MI GY + G   +A+    EM++   E             
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE------------- 530

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCL 555
               P+ ++ +++L  C     L +G     Y ++N    +  +   + +VD+ ++ G L
Sbjct: 531 ----PDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 556 NFARRVFDLMPVR-NVITWNVIIMA-----------------YGMHGEGQEVLELLKNMV 597
           + A    + +P+  +   W  ++                   + +  E      LL N+ 
Sbjct: 586 SKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIY 645

Query: 598 AEGSRGGEVK 607
           AE  +  EVK
Sbjct: 646 AEAEKWEEVK 655


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/788 (36%), Positives = 440/788 (55%), Gaps = 36/788 (4%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q HA +V +G+  + +++   L       G+ ++    +F  +   D   +N ++     
Sbjct: 38  QTHAQIVLHGFR-NDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 158 FGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
                 +L  F  +  S +++P+S T  + A++ ++  R D  R G  +HG ++  G  +
Sbjct: 96  NESPHSSLAVFAHLRKSTDLKPNSSTY-AFAISAASGFRDD--RAGCVIHGQAIVDGCDS 152

Query: 217 TFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             ++ + ++ MY K  RV+DA+ +F    ++D + WNT++S   +N+ ++E++   R + 
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                + D  ++  +LPA + L+ L  G +IH+ A +      + +V +  + +Y  C +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLTGFISLYSKCGK 271

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    +F       I  +NAMI GY  N   E +L LF ++  ++G    ++T+ S+VP
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGAKLKSSTLVSLVP 330

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
               S        IHG+++K        V  AL  +YS++  IE ++ +FD+   +   S
Sbjct: 331 V---SGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN MI+GYT  G   DA+ L REMQN E                   PN +T+  +L  C
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFS-----------------PNPVTITCILSAC 430

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L AL+ GK +H         + + V +AL+ MYAKCG +  ARR+FD MP +N +TWN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWN 490

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I  YG+HG GQE L +   M+  G     + P  VTF+ +  ACSH+G+V EG ++F 
Sbjct: 491 TMISGYGLHGHGQEALTIFSEMLNSG-----IAPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M   YG EPS  HYACVVD+LGRAG ++ A Q I  MP +      W +LLGACRIH++
Sbjct: 546 SMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQ-PGPSVWETLLGACRIHKD 604

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
             +    ++ LF L+PD   ++VLLSNI+S+ + + +A  VR+  K+  + K PG + IE
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
            G+  H F +GD SH Q + +H  LE L  +MR+ GY P+T   LH+V EEE+E ++  H
Sbjct: 665 IGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVH 724

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SE+LAIAFG++ T PGT IR+ KNLRVC DCH ATK ISKI  R I++RD  RFHHFK+G
Sbjct: 725 SERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDG 784

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 785 VCSCGDYW 792


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/731 (39%), Positives = 432/731 (59%), Gaps = 41/731 (5%)

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G++   L+ F  M+ S+VE    T +   L  +   + D L LG+QVH  +L++G +   
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFI---LMLATAVKVDSLALGQQVHCMALKLGLDLML 350

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + N+L+ MY KL +   A+T+F +  +RDL+SWN++++ ++QN   +EAV    Q+   
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410

Query: 278 GIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR--- 333
           G+KPD  ++ SVL A S L E L   K++H +A++ + + D SFV +AL+D Y   R   
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD-SFVSTALIDAYSRNRCMK 469

Query: 334 --EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             E+   R  FD ++      WNAM+ GY Q+    + L LF  M +  G   +  T+++
Sbjct: 470 EAEILFERHNFDLVA------WNAMMAGYTQSHDGHKTLKLFALMHK-QGERSDDFTLAT 522

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V   C    A    + +H +AIK G   D +V + ++DMY + G +  ++  FD + V D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+W TMI+G    G+   A  +  +M+ M               VL   P+  T+ T+ 
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLM--------------GVL---PDEFTIATLA 625

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
                L+AL +G++IHA A++     D  VG++LVDMYAKCG ++ A  +F  + + N+ 
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            WN +++    HGEG+E L+L K M + G     +KP++VTFI + +ACSHSG+VSE   
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLG-----IKPDKVTFIGVLSACSHSGLVSEAYK 740

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
               M  DYGI+P  +HY+C+ D LGRAG V+ A  LI  M  E   A  + +LL ACR+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME-ASASMYRTLLAACRV 799

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
             + E G+  A  L  LEP  +S YVLLSN+Y++A  WD+    R  MK   V+K+PG S
Sbjct: 800 QGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           WIE  ++IH F+  D S++Q+E ++  ++++   +++EGYVP+T   L +V EEEKE  L
Sbjct: 860 WIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERAL 919

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLA+AFG+L+TPP T IRV KNLRVC DCH A K+I+K+ +REI+LRD  RFH F
Sbjct: 920 YYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979

Query: 872 KNGTCSCGDYW 882
           K+G CSCGDYW
Sbjct: 980 KDGICSCGDYW 990



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 289/577 (50%), Gaps = 52/577 (9%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           S Q+   +  + +M  SD++ D   F  +L     +  L+LG+Q+H   +K G  L  +T
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM-LT 351

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V+N+L+NMY K          VFD ++E+D +SWNS+IA + + G    A+  F  +L  
Sbjct: 352 VSNSLINMYCKL-RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRV 233
            ++P  +T+ SV  A S+L   +GL L +QVH +++++    ++F+  AL+  Y++   +
Sbjct: 411 GLKPDQYTMTSVLKAASSLP--EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            +A+ LF+   + DLV+WN +++  +Q+    + +     M  +G + D  ++A+V   C
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L  ++ GK++HAYA+++   +D  +V S ++DMY  C ++   +  FD I       W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
             MI+G  +N  +E A  +F +M  + G+ P+  T++++  A     A      IH +A+
Sbjct: 587 TTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           KL    D +V  +L+DMY++ G I+ +  +F  +E+ +  +WN M+ G    G+  + L 
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC---GALS-ALAKGKEIHA- 528
           L ++M++                 L  KP+ +T + VL  C   G +S A    + +H  
Sbjct: 706 LFKQMKS-----------------LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           Y I+     ++   S L D   + G +  A  + + M +  +   +  ++ A  + G+ +
Sbjct: 749 YGIK----PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804

Query: 588 -------EVLE----------LLKNMVAEGSRGGEVK 607
                  ++LE          LL NM A  S+  E+K
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMK 841



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 217/434 (50%), Gaps = 21/434 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAH 102
           SW   +   A++    EA+  ++++ R  ++PD +   +VLKA + + + LSL KQ+H H
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K    +S   V+  L++ Y +    M +   +F+R    D V+WN+M+A   +     
Sbjct: 443 AIKIN-NVSDSFVSTALIDAYSR-NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGH 499

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             L+ F +M         FTL +V   C  L     +  G+QVH  +++ G + + ++ +
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLF---AINQGKQVHAYAIKSGYDLDLWVSS 556

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MY K G +  A+  F S    D V+W T++S   +N +   A     QM L G+ P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  +IA++  A S L  L+ G++IHA AL+ +   ++ FVG++LVDMY  C  ++    +
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNC-TNDPFVGTSLVDMYAKCGSIDDAYCL 675

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----V 397
           F  I    I  WNAM+ G  Q+   +E L LF +M+ + G+ P+  T   V+ AC    +
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL-GIKPDKVTFIGVLSACSHSGL 734

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
            SEA+     +HG     G+  +    + L D   R G ++ ++ + + M +  + S + 
Sbjct: 735 VSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791

Query: 457 TMITGYTICGQHGD 470
           T++     C   GD
Sbjct: 792 TLLAA---CRVQGD 802



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 268/613 (43%), Gaps = 88/613 (14%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           DL LGK  HA ++ +        + N L++MY KCGS  +   +VFD++ ++D VSWNS+
Sbjct: 54  DLMLGKCTHARILTFEENPERFLI-NNLISMYSKCGSLTY-ARRVFDKMPDRDLVSWNSI 111

Query: 152 IATL-----CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           +A       C       A   FR++    V  S  TL  +   C +      +      H
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY---VWASESFH 168

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           G + ++G + + F+  AL+ +Y K G+V + K LF+    RD+V WN ++ +      +L
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA------YL 222

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           E           G K + + ++S   +        +G   +   LR    I      +  
Sbjct: 223 EM----------GFKEEAIDLSSAFHS--------SGLNPNEITLRLLARISGDDSDAGQ 264

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           V  + N  +           S  +I   N  ++ Y  +      L  F  M E + +  +
Sbjct: 265 VKSFANGNDAS---------SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE-SDVECD 314

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T   ++   V+ ++    + +H  A+KLGL     V N+L++MY ++ +   ++T+FD
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR--PKPN 503
           +M  RD +SWN++I G    G   +A+ L  ++                   LR   KP+
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-------------------LRCGLKPD 415

Query: 504 SITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN-----F 557
             T+ +VL    +L   L+  K++H +AI+    +D  V +AL+D Y++  C+      F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
            R  FDL      + WN ++  Y    +G + L+L   M  +G R      ++ T   +F
Sbjct: 476 ERHNFDL------VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-----DDFTLATVF 524

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             C     +++G  +  Y +K  Y ++      + ++D+  + G +  A    + +P   
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPD 582

Query: 677 DKAGAWSSLLGAC 689
           D   AW++++  C
Sbjct: 583 DV--AWTTMISGC 593



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%)

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           S L  GK  HA  +      +  + + L+ MY+KCG L +ARRVFD MP R++++WN I+
Sbjct: 53  SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112

Query: 578 MAYGMHGEG-----QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
            AY    E      Q+   L + +     R   V  + +T   +   C HSG V    + 
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRIL-----RQDVVYTSRMTLSPMLKLCLHSGYVWAS-ES 166

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           F+      G++        +V++  + GKV++   L   MP  +     W+ +L A
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKA 220


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 290/809 (35%), Positives = 462/809 (57%), Gaps = 42/809 (5%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-- 140
           +LKA     +L LGK +H  ++  G  L SV + N+L+ +Y KCG D  +   +F  +  
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLL-NSLITLYSKCG-DWENALSIFRNMGH 102

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN---VEPSSFTLVSVALACSN-LSRR 196
            ++D VSW+++I+          AL  F  ML  +   + P+ +   ++  +CSN L   
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLG-RVDDAKTLFKSFEDRDLVSWNT 253
            GL     +    L+ G +++ +    AL+ M+ K G  +  A+ +F   + ++LV+W  
Sbjct: 163 TGL----AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTL 218

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++  SQ     +AV    ++ +    PD  ++ S+L AC  LE    GK++H++ +R+ 
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            L  + FVG  LVDMY     VE  R++F+ +    +  W A+I+GY Q+  ++EA+ LF
Sbjct: 279 -LASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLF 337

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             M     + PN  T SSV+ AC     F   + +HG  IKLGL     V N+L++MY+R
Sbjct: 338 CNMLH-GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYAR 396

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G +E ++  F+ +  ++ +S+NT            DA       + ++ +++ N  +++
Sbjct: 397 SGTMECARKAFNILFEKNLISYNTA----------ADA-----NAKALDSDESFN--HEV 439

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           + T +   P   T   +L G   +  + KG++IHA  +++   T++ + +AL+ MY+KCG
Sbjct: 440 EHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCG 497

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
               A +VF+ M  RNVITW  II  +  HG   + LEL   M+  G     VKPNEVT+
Sbjct: 498 NKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIG-----VKPNEVTY 552

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           IA+ +ACSH G++ E    F  M  ++ I P  +HYAC+VDLLGR+G + +A + IN MP
Sbjct: 553 IAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMP 612

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            + D A  W + LG+CR+H+N ++GE AA+ +   EP   + Y+LLSN+Y+S   WD   
Sbjct: 613 FDAD-ALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVA 671

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            +RK MK+  + KE G SWIE  +++HKF  GD SH Q+ +++  L+ L+ +++  GY+P
Sbjct: 672 ALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIP 731

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           +T  VLH+V +E+KE  L  HSEK+A+A+ +++TP    IRV KNLRVC DCH A K+IS
Sbjct: 732 NTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYIS 791

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +  REI++RD  RFHH K+G CSC DYW
Sbjct: 792 IVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 275/594 (46%), Gaps = 47/594 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEM---TRSDIQPDNFAFPAVLKAVAGIQD 92
           G   R   SW   +   A ++    A+L+++ M   +R+ I P+ + F A+L++ +    
Sbjct: 101 GHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLF 160

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
            + G  I A ++K GY  S V V   L++M+ K G D+     VFD++  K+ V+W  MI
Sbjct: 161 FTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMI 220

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
               + G  D A++ F  +L S   P  FTL S+  AC  L   +   LG+Q+H   +R 
Sbjct: 221 TRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVEL---EFFSLGKQLHSWVIRS 277

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   + F+   L+ MYAK   V++++ +F +    +++SW  ++S   Q+ +  EA+   
Sbjct: 278 GLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLF 337

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
             M    + P+  + +SVL AC+ L     GK++H   ++  +   N  VG++L++MY  
Sbjct: 338 CNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC-VGNSLINMYAR 396

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              +EC R+ F+ + +K +  +N       +    +E+   F    E  G+  +  T + 
Sbjct: 397 SGTMECARKAFNILFEKNLISYNTAADANAKALDSDES---FNHEVEHTGVGASPFTYAC 453

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++            E IH   +K G G +  + NAL+ MYS+ G  E +  +F+DM  R+
Sbjct: 454 LLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRN 513

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W ++I+G+   G    AL L  EM                   +  KPN +T + VL
Sbjct: 514 VITWTSIISGFAKHGFATKALELFYEMLE-----------------IGVKPNEVTYIAVL 556

Query: 512 PGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RN 569
             C  +  + +  K  ++    + ++  +   + +VD+  + G L  A    + MP   +
Sbjct: 557 SACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDAD 616

Query: 570 VITWNVIIMAYGMH-----GE--GQEVLE----------LLKNMVAEGSRGGEV 606
            + W   + +  +H     GE   +++LE          LL N+ A   R  +V
Sbjct: 617 ALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDV 670



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 26/303 (8%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-- 447
           S ++ AC+RS      + +H   I  GL  D  + N+L+ +YS+ G  E + +IF +M  
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSW+ +I+ +        AL+    M     + +RN +Y          PN    
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHML----QCSRNIIY----------PNEYCF 148

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGC-LNFARRVFDLM 565
             +L  C        G  I A+ ++     + V VG AL+DM+ K G  +  AR VFD M
Sbjct: 149 TALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKM 208

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             +N++TW ++I  Y   G   + ++L   ++       E  P++ T  +L +AC     
Sbjct: 209 QHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLV-----SEYTPDKFTLTSLLSACVELEF 263

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
            S G  L +      G+         +VD+  ++  VE++ ++ N M        +W++L
Sbjct: 264 FSLGKQL-HSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHH--NVMSWTAL 320

Query: 686 LGA 688
           +  
Sbjct: 321 ISG 323


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 292/811 (36%), Positives = 453/811 (55%), Gaps = 35/811 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV--ANTLVNMYGKCGSDMWDV 133
           D++A   +L+      D   G+ +HA VV+ G G++ +    AN L+N+Y K G  +   
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRG-GVAQLDTFCANVLLNLYAKLGP-LAAA 103

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            ++FD + E++ VS+ +++      G ++ A   FR +     E + F L ++      L
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKV---L 160

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
              D   L   +H  + ++G + N F+ ++L+  Y+  G V  A+ +F     +D V+W 
Sbjct: 161 VAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWT 220

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            +VS  S+ND   +A+    +M + G KP+   + SVL A   L     GK IH  A++ 
Sbjct: 221 AMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT 280

Query: 313 DILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             L D    VG AL+DMY  C  +E  R VF+ I    + LW+ +I+ Y Q+  +E+A  
Sbjct: 281 --LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFE 338

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F++M   + + PN  ++S V+ AC         + IH   IKLG   + +V NALMD+Y
Sbjct: 339 MFLRMMR-SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVY 397

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++   +E S  IF  +   + VSWNT+I GY   G   DAL + +EM+            
Sbjct: 398 AKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAH--------- 448

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                VL  +   +T  +VL  C   +++    +IH+   ++    D +V ++L+D YAK
Sbjct: 449 -----VLSTQ---VTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAK 500

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CGC+  A +VF+ +   +V++WN II  Y +HG   + LEL   M        + KPN+V
Sbjct: 501 CGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRM-----NKSDTKPNDV 555

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+AL + C  +G+V++G+ LF  M  D+ I+PS DHY C+V LLGRAG++ DA + I  
Sbjct: 556 TFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGD 615

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           +P        W +LL +C +H+NV +G+ +A+ +  +EP   + YVLLSN+Y++A + D+
Sbjct: 616 IPST-PSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQ 674

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              +RK M+ +GV+KE G SW+E   E+H F  G   H     ++  LE L+ +  +EGY
Sbjct: 675 VALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGY 734

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           VPD + VLH+V+EEEK  +L  HSE+LA+A+G+  TPPG  IR+ KNLR C DCH   K 
Sbjct: 735 VPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKV 794

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISKI  REI++RD+ RFHHF  G CSCGDYW
Sbjct: 795 ISKIVQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 271/552 (49%), Gaps = 29/552 (5%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   S++  ++  A    F EA   +  + R   + ++F    +LK +  +    L
Sbjct: 109 GMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGL 168

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
              IHA   K G+  ++  V ++L++ Y  CG+ +     VFD I  KD V+W +M++  
Sbjct: 169 TCCIHACACKLGHDRNAF-VGSSLIDAYSLCGA-VSHARCVFDGIIWKDAVTWTAMVSCY 226

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
                 + AL  F  M  +  +P+ F L SV  A   LS      LG+ +HG +++ + +
Sbjct: 227 SENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLS---SAVLGKGIHGCAVKTLCD 283

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQ 273
               +  AL+ MYAK G ++DA+T+F+     D++ W+ ++S  +Q+ +  +A  MFLR 
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M    + P+  S++ VL AC+++  LD G++IH   ++        FVG+AL+D+Y  CR
Sbjct: 344 MR-SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYE-SELFVGNALMDVYAKCR 401

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E    +F  + D     WN +I GY Q+ + E+AL +F +M   A +     T SSV+
Sbjct: 402 NMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEM-RAAHVLSTQVTFSSVL 460

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC  + +      IH    K     D  V N+L+D Y++ G I  +  +F+ +   D V
Sbjct: 461 RACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVV 520

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN +I+GY + G+  DAL L           NR N  D        KPN +T + +L  
Sbjct: 521 SWNAIISGYALHGRATDALELF----------NRMNKSD-------TKPNDVTFVALLSV 563

Query: 514 CGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR-VFDLMPVRNVI 571
           CG+   + +G  + ++  + + +   +   + +V +  + G LN A + + D+    + +
Sbjct: 564 CGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPM 623

Query: 572 TWNVIIMAYGMH 583
            W  ++ +  +H
Sbjct: 624 VWRALLSSCVVH 635


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/665 (39%), Positives = 398/665 (59%), Gaps = 26/665 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F++   +     +G +  A+ +F  F +  +  WN I+   S ++ F +A+    +M   
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+ PDG ++  VL ACS + +L+ GK +H    R     D  FV + LV +Y  C  VE 
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD-VFVQNGLVALYAKCGRVEQ 222

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VF+ + D+ I  W +MI+GYGQN    EAL +F +M +   + P+   + SV+ A  
Sbjct: 223 ARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQ-RNVKPDWIALVSVLRAYT 281

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E     + IHG  +K+GL  +  +  +L  MY++ G++ ++++ FD ME+ + + WN 
Sbjct: 282 DVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNA 341

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI+GY   G   +A+ L +EM +        N+          + +SIT+ + +  C  +
Sbjct: 342 MISGYAKNGYTNEAVGLFQEMIS-------KNI----------RTDSITVRSAILACAQV 384

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
            +L   K +  Y  +     DV V +AL+DM+AKCG ++ AR VFD    ++V+ W+ +I
Sbjct: 385 GSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMI 444

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           + YG+HG GQ+ ++L   M   G     V PN+VTF+ L  AC+HSG+V EG +LF+ MK
Sbjct: 445 VGYGLHGRGQDAIDLFYAMKQAG-----VCPNDVTFVGLLTACNHSGLVEEGWELFHSMK 499

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
             YGIE    HYACVVDLLGR+G + +AY  I  MP E      W +LLGAC+I+++V +
Sbjct: 500 Y-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIE-PGVSVWGALLGACKIYRHVTL 557

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GE AA+ LF L+P    HYV LSN+Y+S++LWD    VR  M+E G+ K+ G S IE   
Sbjct: 558 GEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEING 617

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           ++  F  GD SH + +++   LE+L  R+++ G++P    VLH++N+EEKE  LC HSE+
Sbjct: 618 KLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSER 677

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LAIA+G+++T PGTT+R+ KNLR C +CH ATK ISK+ +REI++RD  RFHHFKNG CS
Sbjct: 678 LAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCS 737

Query: 878 CGDYW 882
           C DYW
Sbjct: 738 CRDYW 742



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 239/485 (49%), Gaps = 28/485 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QIHA +V  G  + S  +    VN     G ++    KVFD   E     WN++I     
Sbjct: 89  QIHAQLVVSGL-VESGFLVTKFVNASWNIG-EIGYARKVFDEFPEPSVFLWNAIIRGYSS 146

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
              +  A+E +  M  S V P  FTL  V  ACS +     L +G++VHG   R+G E +
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPV---LEVGKRVHGQIFRLGFESD 203

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ N L+A+YAK GRV+ A+ +F+  +DR++VSW +++S   QN   +EA+    QM  
Sbjct: 204 VFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQ 263

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           R +KPD +++ SVL A + +E L+ GK IH   ++  +  +   + S L  MY  C +V 
Sbjct: 264 RNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLIS-LTAMYAKCGQVM 322

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R  FD +    + +WNAMI+GY +N Y  EA+ LF +M     +  ++ T+ S + AC
Sbjct: 323 VARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMIS-KNIRTDSITVRSAILAC 381

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            +  +    + +  +  K     D +V  AL+DM+++ G +++++ +FD    +D V W+
Sbjct: 382 AQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWS 441

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI GY + G+  DA+ L   M+                      PN +T + +L  C  
Sbjct: 442 AMIVGYGLHGRGQDAIDLFYAMKQAG-----------------VCPNDVTFVGLLTACNH 484

Query: 517 LSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
              + +G E+ H+     + A      + +VD+  + G LN A      MP+   V  W 
Sbjct: 485 SGLVEEGWELFHSMKYYGIEARHQHY-ACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWG 543

Query: 575 VIIMA 579
            ++ A
Sbjct: 544 ALLGA 548



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 225/425 (52%), Gaps = 25/425 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +  N F +AI  Y  M  S + PD F  P VLKA +G+  L +GK++H  + 
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+  S V V N LV +Y KCG  +     VF+ + +++ VSW SMI+    +G+  L 
Sbjct: 197 RLGFE-SDVFVQNGLVALYAKCGR-VEQARIVFEGLDDRNIVSWTSMISG---YGQNGLP 251

Query: 165 LEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
           +EA R+   M   NV+P    LVSV  A +++   + L  G+ +HG  +++G E+   ++
Sbjct: 252 MEALRIFGQMRQRNVKPDWIALVSVLRAYTDV---EDLEQGKSIHGCVVKMGLEFEPDLL 308

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L AMYAK G+V  A++ F   E  +++ WN ++S  ++N    EAV   ++M  + I+
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIR 368

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCREVE 336
            D +++ S + AC+ +  LD  K +  Y      RND+     FV +AL+DM+  C  V+
Sbjct: 369 TDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDV-----FVNTALIDMFAKCGSVD 423

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R VFD   DK + +W+AMI GYG +   ++A+ LF  M++ AG+ PN  T   ++ AC
Sbjct: 424 LAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQ-AGVCPNDVTFVGLLTAC 482

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEVRDTVS- 454
             S    +   +  H++K      R+   A ++D+  R G +  +      M +   VS 
Sbjct: 483 NHSGLVEEGWELF-HSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSV 541

Query: 455 WNTMI 459
           W  ++
Sbjct: 542 WGALL 546



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 6/271 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +    ++    EA+  + +M + +++PD  A  +VL+A   ++DL  
Sbjct: 229 GLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQ 288

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK IH  VVK G       +  +L  MY KCG  M      FD++   + + WN+MI+  
Sbjct: 289 GKSIHGCVVKMGLEFEPDLLI-SLTAMYAKCGQVM-VARSFFDQMEIPNVMMWNAMISGY 346

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGE 214
            + G  + A+  F+ M+  N+   S T+ S  LAC+ +   D  + +G  ++    R   
Sbjct: 347 AKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRN-- 404

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+  AL+ M+AK G VD A+ +F    D+D+V W+ ++     + +  +A+     M
Sbjct: 405 -DVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAM 463

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
              G+ P+ V+   +L AC+H  +++ G E+
Sbjct: 464 KQAGVCPNDVTFVGLLTACNHSGLVEEGWEL 494



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IHA  + + L     + +  V+     G + +AR+VFD  P  +V  WN II  Y  H 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
              + +E+   M A G     V P+  T   +  ACS   ++  G  +  ++    G E 
Sbjct: 149 FFGDAIEMYSRMQASG-----VNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF-RLGFES 202

Query: 645 SPDHYACVVDLLGRAGKVEDA 665
                  +V L  + G+VE A
Sbjct: 203 DVFVQNGLVALYAKCGRVEQA 223


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/764 (37%), Positives = 438/764 (57%), Gaps = 31/764 (4%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q  C  +W   +R      QF  A+L Y++M  + + PD + FP V+KA  G++ + +GK
Sbjct: 19  QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGK 78

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H  V   G     V V ++L+ +Y + G  + D   +FD I +KD V WN M+    +
Sbjct: 79  IVHETVNLMGLK-EDVFVGSSLIKLYAENG-HLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G    A++ F  M +S ++P+S T   V   C++ +  D   LG Q+HG ++  G E +
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLD---LGTQLHGIAVGCGLELD 193

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           + + N L+AMY+K   +  A+ LF +    DLVSWN I+S   QN    EA    R M  
Sbjct: 194 SPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMIS 253

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GIKPD ++ AS LP  + L  L   KEIH Y +R+ +++D  F+ SAL+D+Y  CR+VE
Sbjct: 254 AGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLD-VFLKSALIDIYFKCRDVE 312

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             ++     S     +   MI+GY  N  ++EAL  F  + +   + P + T SS+ PA 
Sbjct: 313 MAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAF 371

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    + +HG  IK  L    +V +A++DMY++ GR++++  +F+ +  +D + WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MIT  +  G+ G+A+ L R+M  ME  +     YD            +++   L  C  
Sbjct: 432 SMITSCSQNGRPGEAINLFRQM-GMEGTR-----YD-----------CVSISGALSACAN 474

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  GKEIH   I+  L +D+   S+L+DMYAKCG LNF+RRVFD M  +N ++WN I
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSI 534

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I AYG HG+ +E L L   M+  G     ++P+ VTF+ + +AC H+G V EG+  ++ M
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNG-----IQPDHVTFLGIISACGHAGQVDEGIRYYHLM 589

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
            ++YGI    +HYACV D+ GRAG++ +A++ IN MP   D AG W +LLGAC IH NVE
Sbjct: 590 TEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPD-AGVWGTLLGACHIHGNVE 648

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + E+A+++LF L+P  + +YVLL+N+ + A  W K + VR  MKE GVRK PG SWIE  
Sbjct: 649 LAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVN 708

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           +  H F+A DGSH  + Q++  L++L   ++KEGYVP     +H
Sbjct: 709 NATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 45/488 (9%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY + G + DAK LF + +     +WN ++   +   +F  A++F  +M   G+ PD  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 286 IASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
              V+ AC  L+ +  GK +H       L+ D+     FVGS+L+ +Y     +   + +
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDV-----FVGSSLIKLYAENGHLSDAQYL 115

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I  K   LWN M+ GY +N     A+ +F++M   + + PN+ T + V+  C     
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEIKPNSVTFACVLSVCASEAM 174

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +HG A+  GL  D  V N L+ MYS+   ++ ++ +FD +   D VSWN +I+G
Sbjct: 175 LDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISG 234

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G  G+A  L R M +                    KP+SIT  + LP    L +L 
Sbjct: 235 YVQNGLMGEAEHLFRGMISAG-----------------IKPDSITFASFLPCVNELLSLK 277

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
             KEIH Y IR+ +  DV + SAL+D+Y KC  +  A++        + +    +I  Y 
Sbjct: 278 HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYV 337

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYKMKD 638
           ++G+ +E LE  + +V E      +KP  VTF ++F A +    ++ G +L     K K 
Sbjct: 338 LNGKNKEALEAFRWLVQE-----RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           D          + ++D+  + G+++ A ++ N +  +   A  W+S++ +C   QN   G
Sbjct: 393 DEKCHVG----SAILDMYAKCGRLDLACRVFNRITEK--DAICWNSMITSCS--QNGRPG 444

Query: 699 EIAAQNLF 706
           E  A NLF
Sbjct: 445 E--AINLF 450


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 437/763 (57%), Gaps = 40/763 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLA--LEAFRMMLYSNVEPSSFTLVSVALACS 191
           + +FD+I   D  ++N +I           A  L  +R ML   V P+++T      ACS
Sbjct: 77  HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
            L+       GR +H +++  G + + F+  AL+ MY K   + DA  +F +   RDLV+
Sbjct: 137 ALADH---HCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVA 193

Query: 251 WNTIVSSLSQNDKFLEAVMFL--RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           WN +++  + +  +  AV  L   QM +  ++P+  ++ ++LP  +    L  G  +HAY
Sbjct: 194 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 309 ALRNDI---------LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
            +R  +         L D   +G+AL+DMY  C  +   RRVFD +  +    W+A+I G
Sbjct: 254 RIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 313

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           +       +A +LF  M      + + T+++S + AC   +     E +H    K G+  
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D    N+L+ MY++ G I+ +  +FD+M V+DTVS++ +++GY   G+  +A ++ ++MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
               E                 P++ T+++++P C  L+AL  G+  H   I   LA++ 
Sbjct: 434 ACNVE-----------------PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + +AL+DMYAKCG ++ +R+VF++MP R++++WN +I  YG+HG G+E   L   M   
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 536

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G       P+ VTFI L +ACSHSG+V EG   F+ M+  YG+ P  +HY C+VDLL R 
Sbjct: 537 G-----FPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRG 591

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G +++AY+ I  MP   D    W +LLGACR+++N+++G+  ++ +  L P+   ++VLL
Sbjct: 592 GFLDEAYEFIQSMPLRAD-VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIYS+A  +D+A +VR   K  G +K PGCSWIE    +H F+ GD SH QS +++  L
Sbjct: 651 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           +N+   ++K GY PDTS VL ++ EEEKE  L  HSEKLAIA+GIL+     TI V KNL
Sbjct: 711 DNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNL 770

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH   K IS ++ R II+RD  RFHHFKNG CSCGD+W
Sbjct: 771 RVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 277/563 (49%), Gaps = 57/563 (10%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M R  + P+N+ FP  LKA + + D   G+ IH H +  G   + + V+  L++MY 
Sbjct: 113 YRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYV 171

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA---LEAFRMMLYSNVEPSSF 181
           KC   + D   +F  +  +D V+WN+M+A     G +  A   L + +M ++  + P++ 
Sbjct: 172 KCAC-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH-RLRPNAS 229

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-----------TFIMNALMAMYAKL 230
           TLV++      L+++  L  G  VH   +R    +             +  AL+ MYAK 
Sbjct: 230 TLVAL---LPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKC 286

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG---IKPDGVSIA 287
           G +  A+ +F +   R+ V+W+ ++       +  +A +  + M  +G   + P   SIA
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIA 344

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S L AC+ L+ L  G+++HA   ++ +  D +  G++L+ MY     ++    +FD ++ 
Sbjct: 345 SALRACASLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAV 403

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K    ++A+++GY QN   EEA ++F KM +   + P+A TM S++PAC    A      
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRC 462

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
            HG  I  GL  +  + NAL+DMY++ GRI++S+ +F+ M  RD VSWNTMI GY I G 
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-- 525
             +A  L  EM N                 L   P+ +T + +L  C     + +GK   
Sbjct: 523 GKEATALFLEMNN-----------------LGFPPDGVTFICLLSACSHSGLVIEGKHWF 565

Query: 526 ---IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYG 581
               H Y +   +   +     +VD+ ++ G L+ A      MP+R +V  W  ++ A  
Sbjct: 566 HVMRHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621

Query: 582 MHGE---GQEVLELLKNMVAEGS 601
           ++     G++V  +++ +  EG+
Sbjct: 622 VYKNIDLGKKVSRMIQELGPEGT 644


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/752 (36%), Positives = 425/752 (56%), Gaps = 35/752 (4%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++F  + EK+ VSWN+++    + G     L+ F  M     + S FTL +V   C+N  
Sbjct: 6   RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               LR G+ +H  +LR G E + F+  +L+ MY+K G V DA  +F    + D+V+W+ 
Sbjct: 66  ---SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++ L Q     EA      M  +G +P+  +++S++   +++  L  G+ IH    +  
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              DN  V + L+ MY   R VE G +VF+ +++  +  WNA+++G+  ++       +F
Sbjct: 183 FESDN-LVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M  + G  PN  T  SV+ +C         + +H H IK     D +V  AL+DMY++
Sbjct: 242 YQML-LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              +E +   FD +  RD  SW  +I+GY    Q   A+   R+MQ       R  +   
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ-------REGI--- 350

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                  KPN  TL + L GC  ++ L  G+++HA A++     D+ VGSALVD+Y KCG
Sbjct: 351 -------KPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCG 403

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           C+  A  +F  +  R++++WN II  Y  HG+G++ LE  + M++EG     + P+E TF
Sbjct: 404 CMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEG-----IMPDEATF 458

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI---N 670
           I + +ACS  G+V EG   F  M   YGI PS +HYAC+VD+LGRAGK  +    I   N
Sbjct: 459 IGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN 518

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
           + P        W ++LGAC++H NV+ GE AA+ LF +EP + S Y+LLSNI++S   WD
Sbjct: 519 LTPYSL----IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWD 574

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
              ++R  M   G++KEPGCSW+E   ++H FL+ DGSH +  +++  L+ L + +   G
Sbjct: 575 DVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIG 634

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           YVP T  VLHNV+ +EK   L  HSE+LA++F +L+T     IR+ KNLR+C DCH   K
Sbjct: 635 YVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMK 694

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IS I ++EI++RD+RRFHHFK GTCSC D W
Sbjct: 695 LISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/544 (29%), Positives = 268/544 (49%), Gaps = 27/544 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   A+    ++ +  + +M   + +   F    VLK  A    L  GK +HA  
Sbjct: 18  SWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALA 77

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G  +    +  +LV+MY KCG+ ++D  KVF +I   D V+W++MI  L + G    
Sbjct: 78  LRSGCEIDEF-LGCSLVDMYSKCGT-VYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQE 135

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A E F +M      P+ FTL S+    +N+     LR G+ +HG   + G E +  + N 
Sbjct: 136 AAELFHLMRRKGARPNQFTLSSLVSTATNMG---DLRYGQSIHGCICKYGFESDNLVSNP 192

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K   V+D   +F++  + DLVSWN ++S    +           QM L G KP+
Sbjct: 193 LIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPN 252

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SVL +CS L   + GK++HA+ ++N    D+ FVG+ALVDMY   R +E     F
Sbjct: 253 MFTFISVLRSCSSLLDPEFGKQVHAHIIKNSS-DDDDFVGTALVDMYAKARCLEDAGVAF 311

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D + ++ I  W  +I+GY Q +  E+A+  F +M+   G+ PN  T++S +  C      
Sbjct: 312 DRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR-EGIKPNEYTLASCLSGCSHMATL 370

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            +   +H  A+K G   D +V +AL+D+Y + G +E ++ IF  +  RD VSWNT+I+GY
Sbjct: 371 ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           +  GQ   AL   R M              L E ++   P+  T + VL  C  +  + +
Sbjct: 431 SQHGQGEKALEAFRMM--------------LSEGIM---PDEATFIGVLSACSFMGLVEE 473

Query: 523 GKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAY 580
           GK+   + +    +   +   + +VD+  + G  N  +   + M +    + W  ++ A 
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533

Query: 581 GMHG 584
            +HG
Sbjct: 534 KLHG 537



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 23/287 (8%)

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E   R+F  + +K    WNA++ GY Q    ++ L LF KM+E    + +  T+S+V+ 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKF-SKFTLSTVLK 59

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
            C  + +  + + +H  A++ G   D ++  +L+DMYS+ G +  +  +F  +   D V+
Sbjct: 60  GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W+ MITG    G   +A  L   M+                     +PN  TL +++   
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKG-----------------ARPNQFTLSSLVSTA 162

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             +  L  G+ IH    +    +D +V + L+ MY K  C+    +VF+ M   ++++WN
Sbjct: 163 TNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWN 222

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            ++  +           +   M+ EG      KPN  TFI++  +CS
Sbjct: 223 ALLSGFYDSQTCGRGPRIFYQMLLEG-----FKPNMFTFISVLRSCS 264



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A R+F  MP +N ++WN ++  Y   G+G++VL+L   M     +  E K ++ T  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKM-----KECETKFSKFTLS 55

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM-P 673
            +   C+++G + EG  + + +    G E        +VD+  + G V DA ++   +  
Sbjct: 56  TVLKGCANTGSLREG-KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN 114

Query: 674 PEFDKAGAWSSLL 686
           P+     AWS+++
Sbjct: 115 PD---VVAWSAMI 124


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/683 (40%), Positives = 394/683 (57%), Gaps = 36/683 (5%)

Query: 210  LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV-SWNTIVSSLSQNDKFLEAV 268
            LRV E + F++    +    +    +  T F  + D+  V SWN++++ L++    +EA+
Sbjct: 1069 LRVAE-DQFLLGFPSSRRRPVSLSSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEAL 1127

Query: 269  MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                 +   G+ P   S    + +CS L  L +G+  H  A       D  FV SAL+DM
Sbjct: 1128 RAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETD-LFVSSALIDM 1186

Query: 329  YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF-------IKMEEVAG 381
            Y  C +++  R +FD I  + +  W +MITGY QNE  + AL+LF        ++E+   
Sbjct: 1187 YSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNN 1246

Query: 382  LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            +  ++  M SV+ AC R       EG+HG  +K G      V N LMD Y++ G+  +SK
Sbjct: 1247 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 1306

Query: 442  TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
             +FD ME +D +SWN+MI  Y   G  G+AL +   M                   +  +
Sbjct: 1307 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH----------------VGVR 1350

Query: 502  PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
             N++TL  VL  C    AL  GK IH   I+  L  +V VG++++DMY KCG +  A++ 
Sbjct: 1351 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKT 1410

Query: 562  FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            FD M  +NV +W  ++  YGMHG  +E L++   MV  G     VKPN +TF+++ AACS
Sbjct: 1411 FDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-----VKPNYITFVSVLAACS 1465

Query: 622  HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN--MMPPEFDKA 679
            H+G+V EG   F  MK  Y IEP  +HY C+VDL GRAG + +AY LI    M P+F   
Sbjct: 1466 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV-- 1523

Query: 680  GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
              W SLLGACRIH+NV++GEIAAQ LF L+PD   +YVLLSN+Y+ A  W     +R  M
Sbjct: 1524 -VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLM 1582

Query: 740  KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
            K   + K PG S +E    +H FL GD  H   E ++ +LE L+  ++K GYVP+ + VL
Sbjct: 1583 KNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVL 1642

Query: 800  HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
            H+V+EEEKE +L  HSEKLA+AFG++N+ PGTTI + KNLRVC DCH   K ISK+  R+
Sbjct: 1643 HDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRD 1702

Query: 860  IILRDVRRFHHFKNGTCSCGDYW 882
             ++RD +RFHHFK+G CSCGDYW
Sbjct: 1703 FVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 199/396 (50%), Gaps = 30/396 (7%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C + + L   ++IHA  +R+  L ++  +   L+ +Y     +     +F  I + 
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSG-LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WN +I     N   E+ALML+  M    G+  +  T   V+ AC    +    + +
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMV-CQGIAADKFTFPFVIKACTNFLSIDLGKVV 147

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG  IK G   D +VQN L+D Y + G    +  +F+ M VR+ VSW T+I+G   CG  
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207

Query: 469 GDALMLLREM--QNMEEEKNRNNVYDLDETVLRPK---------------PNSITLMTVL 511
            +A  +  E+  +N+       N Y  ++   +P+               PN  T+++++
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQ---QPEEALELFKRMQAENIFPNEYTMVSLI 264

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  +  L  G+ IH YAI+N +   V +G+AL+DMY+KCG +  A  VF+ MP +++ 
Sbjct: 265 KACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP 324

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN +I + G+HG GQE L L   M         VKP+ +TFI +  AC H   V EG  
Sbjct: 325 TWNSMITSLGVHGLGQEALNLFSEM-----ERVNVKPDAITFIGVLCACVHIKNVKEGCA 379

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            F +M   YGI P P+HY C+ +L  R+  +++A++
Sbjct: 380 YFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 224/433 (51%), Gaps = 27/433 (6%)

Query: 43   ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
             SW   +   AR     EA+ ++  + +  + P   +FP  +K+ + + DL  G+  H  
Sbjct: 1108 HSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQ 1167

Query: 103  VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
               +G+  + + V++ L++MY KCG  + D   +FD I  ++ VSW SMI    +  + D
Sbjct: 1168 AFVFGFE-TDLFVSSALIDMYSKCG-QLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 163  LALEAFRMMLY--------SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             AL  F+  L         +NV   S  +VSV  ACS +S   G  +   VHG  ++ G 
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVS---GKGITEGVHGFVVKKGF 1282

Query: 214  EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            + +  + N LM  YAK G+   +K +F   E++D +SWN++++  +Q+    EA+     
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 1342

Query: 274  MALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M    G++ + V++++VL AC+H   L  GK IH   ++ D L  N  VG++++DMYC C
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVGTSIIDMYCKC 1401

Query: 333  REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
              VE  ++ FD + +K +  W AM+ GYG +   +EAL +F KM   AG+ PN  T  SV
Sbjct: 1402 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR-AGVKPNYITFVSV 1460

Query: 393  VPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            + AC  S A   +EG H      H   +  G + Y    ++D++ R G +  +  +   M
Sbjct: 1461 LAAC--SHAGLVEEGWHWFNAMKHKYDIEPGIEHY--GCMVDLFGRAGCLNEAYNLIKRM 1516

Query: 448  EVR-DTVSWNTMI 459
            +++ D V W +++
Sbjct: 1517 KMKPDFVVWGSLL 1529



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 59/357 (16%)

Query: 203 RQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQ+H   +R G  N   +   L+ +Y+  GR+  A  LF   ++    +WN I+ + + N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILID 317
               +A+M  + M  +GI  D  +   V+ AC++   +D GK +H     Y    D+ + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 318 NSFVGSALVDMYCNCRE--------------------------VECG-----RRVFDFIS 346
           N+     L+D Y  C                            + CG     RR+FD I 
Sbjct: 164 NN-----LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  W AMI GY +N+  EEAL LF +M+    ++PN  TM S++ AC          
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQ-AENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
           GIH +AIK  +    Y+  AL+DMYS+ G I+ +  +F+ M  +   +WN+MIT   + G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              +AL L  EM+       R NV          KP++IT + VL  C  +  + +G
Sbjct: 338 LGQEALNLFSEME-------RVNV----------KPDAITFIGVLCACVHIKNVKEG 377



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 35/296 (11%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q  C  +W   +R+   +    +A++ Y  M    I  D F FP V+KA      + LGK
Sbjct: 86  QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCG------------------------------ 127
            +H  ++KYG+    V V N L++ Y KCG                              
Sbjct: 146 VVHGSLIKYGFS-GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISC 204

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+ +  ++FD I  K+ VSW +MI    R  + + ALE F+ M   N+ P+ +T+VS+ 
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264

Query: 188 LACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC+ +     L LGR +H  +++   E   ++  AL+ MY+K G + DA  +F++   +
Sbjct: 265 KACTEMGI---LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            L +WN++++SL  +    EA+    +M    +KPD ++   VL AC H++ +  G
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 160/333 (48%), Gaps = 39/333 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIHA +++ G     + +   L+++Y   G   + +  +F +I      +WN +I    
Sbjct: 44  RQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAIL-LFYQIQNPCTFTWNLIIRANT 101

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
             G  + AL  ++ M+   +    FT   V  AC+N    D   LG+ VHG+ ++ G   
Sbjct: 102 INGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSID---LGKVVHGSLIKYGFSG 158

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL----------------- 258
           + F+ N L+  Y K G    A  +F+    R++VSW T++S L                 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 259 --------------SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                          +N +  EA+   ++M    I P+  ++ S++ AC+ + +L  G+ 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IH YA++N I I   ++G+AL+DMY  C  ++    VF+ +  K +  WN+MIT  G + 
Sbjct: 279 IHDYAIKNCIEI-GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             +EAL LF +ME V  + P+A T   V+ ACV
Sbjct: 338 LGQEALNLFSEMERV-NVKPDAITFIGVLCACV 369



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 62/325 (19%)

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F     IH   I+ GL  D+ +   L+ +YS  GRI  +  +F  ++   T +WN +I  
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 462 YTICGQHGDALMLLREM--QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            TI G    ALML + M  Q +  +K                    T   V+  C    +
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADK-------------------FTFPFVIKACTNFLS 140

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM- 578
           +  GK +H   I+   + DV V + L+D Y KCG   FA +VF+ M VRNV++W  +I  
Sbjct: 141 IDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISG 200

Query: 579 ------------------------------AYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
                                          Y  + + +E LEL K M AE      + P
Sbjct: 201 LISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE-----NIFP 255

Query: 609 NEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           NE T ++L  AC+  G+++ G  +  Y +K+   IE        ++D+  + G ++DA +
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKN--CIEIGVYLGTALIDMYSKCGSIKDAIE 313

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH 692
           +   MP +      W+S++ +  +H
Sbjct: 314 VFETMPRK--SLPTWNSMITSLGVH 336



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 120/263 (45%), Gaps = 32/263 (12%)

Query: 488 NNVYDLDETVLRPKPN--SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           ++V+      L P+ N  +   + +L  C     L   ++IHA  IR+ L+ D ++   L
Sbjct: 9   HDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKL 65

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + +Y+  G + +A  +F  +      TWN+II A  ++G  ++ L L KNMV +G     
Sbjct: 66  IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG----- 120

Query: 606 VKPNEVTFIALFAACSHS-----GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
           +  ++ TF  +  AC++      G V  G  + Y    D  ++ +      ++D   + G
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN------LIDFYFKCG 174

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA-AQNLF--LLEPDVASHYV 717
               A ++   M        +W++++        +  G++  A+ +F  +   +V S + 
Sbjct: 175 HTRFALKVFEKM--RVRNVVSWTTVISGL-----ISCGDLQEARRIFDEIPSKNVVS-WT 226

Query: 718 LLSNIYSSAQLWDKAMDVRKKMK 740
            + N Y   Q  ++A+++ K+M+
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQ 249


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 290/794 (36%), Positives = 442/794 (55%), Gaps = 50/794 (6%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV------YKVFDRITEKDQVSWNSM 151
           + HA +++ GY     TV         K    ++DV        +F  + + D   +N +
Sbjct: 26  ETHAQLIRNGYQHDLATVT--------KLTQKLFDVGATRHARALFFSVPKPDIFLFNVL 77

Query: 152 IATLCRFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           I     F   D +  +F   L  N  + P +FT    A A   +S      LG  +H ++
Sbjct: 78  IKGF-SFSP-DASSISFYTHLLKNTTLSPDNFTY---AFA---ISASPDDNLGMCLHAHA 129

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +  G + N F+ +AL+ +Y K  RV  A+ +F    DRD V WNT+++ L +N  + ++V
Sbjct: 130 VVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSV 189

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
              + M  +G++ D  ++A+VLPA + ++ +  G  I   AL+     D+ +V + L+ +
Sbjct: 190 QVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD-YVLTGLISV 248

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           +  C +V+  R +F  I    +  +NA+I+G+  N   E A+  F ++  V+G   +++T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELL-VSGQRVSSST 307

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           M  ++P             I G  +K G      V  AL  +YSR+  I++++ +FD+  
Sbjct: 308 MVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESS 367

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +   +WN MI+GY   G    A+ L +EM   E                   PN +T+ 
Sbjct: 368 EKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEF-----------------TPNPVTIT 410

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  L AL+ GK +H       L  ++ V +AL+DMYAKCG ++ A ++FDL   +
Sbjct: 411 SILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEK 470

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           N +TWN +I  YG+HG G E L+L   M+  G      +P+ VTF+++  ACSH+G+V E
Sbjct: 471 NTVTWNTMIFGYGLHGYGDEALKLFNEMLHLG-----FQPSSVTFLSVLYACSHAGLVRE 525

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G ++F+ M + Y IEP  +HYAC+VD+LGRAG++E A + I  MP E   A  W +LLGA
Sbjct: 526 GDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPA-VWGTLLGA 584

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C IH++  +  +A++ LF L+P    +YVLLSNIYS  + + KA  VR+ +K+  + K P
Sbjct: 585 CMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTP 644

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           GC+ IE     H F+ GD SH Q+  ++  LE L+ +MR+ GY  +T   LH+V EEEKE
Sbjct: 645 GCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKE 704

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            +   HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISKI  R I++RD  RF
Sbjct: 705 LMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRF 764

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSCGDYW
Sbjct: 765 HHFKDGICSCGDYW 778



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/554 (28%), Positives = 278/554 (50%), Gaps = 37/554 (6%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           +  + + PDNF +     A++   D +LG  +HAH V  G+  S++ VA+ LV++Y K  
Sbjct: 97  LKNTTLSPDNFTYAF---AISASPDDNLGMCLHAHAVVDGFD-SNLFVASALVDLYCKF- 151

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
           S +    KVFD++ ++D V WN+MI  L R   +D +++ F+ M+   V   S T+ +V 
Sbjct: 152 SRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVL 211

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            A + +     +++G  +   +L++G  ++ +++  L+++++K   VD A+ LF      
Sbjct: 212 PAVAEMQE---VKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKP 268

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           DLVS+N ++S  S N +   AV + R++ + G +    ++  ++P  S    L     I 
Sbjct: 269 DLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQ 328

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            + +++  ++  S V +AL  +Y    E++  R++FD  S+K +A WNAMI+GY Q+   
Sbjct: 329 GFCVKSGTILQPS-VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLT 387

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           E A+ LF +M       PN  T++S++ AC +  A    + +H       L ++ YV  A
Sbjct: 388 EMAISLFQEMMTTE-FTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTA 446

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMY++ G I  +  +FD    ++TV+WNTMI GY + G   +AL L  EM +      
Sbjct: 447 LIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH------ 500

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSAL 545
                      L  +P+S+T ++VL  C     + +G EI HA   +  +       + +
Sbjct: 501 -----------LGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACM 549

Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           VD+  + G L  A      MPV      W  ++ A  +H +       L  + +E  R  
Sbjct: 550 VDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTN-----LARVASE--RLF 602

Query: 605 EVKPNEVTFIALFA 618
           E+ P  V +  L +
Sbjct: 603 ELDPGNVGYYVLLS 616



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  +   +W   +   A+S     AI  + EM  ++  P+     ++L A A +  LS G
Sbjct: 366 SSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFG 425

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K +H  ++K      ++ V+  L++MY KCG ++ +  ++FD  +EK+ V+WN+MI    
Sbjct: 426 KSVH-QLIKSKNLEQNIYVSTALIDMYAKCG-NISEASQLFDLTSEKNTVTWNTMIFGYG 483

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             G  D AL+ F  ML+   +PSS T +SV  ACS+
Sbjct: 484 LHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSH 519


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 436/763 (57%), Gaps = 40/763 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLA--LEAFRMMLYSNVEPSSFTLVSVALACS 191
           + +FD+I   D  ++N +I           A  L  +R ML   V P+++T      ACS
Sbjct: 77  HHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
            L+       GR +H +++  G + + F+  AL+ MY K   + DA  +F +   RDLV+
Sbjct: 137 ALADH---HCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVA 193

Query: 251 WNTIVSSLSQNDKFLEAVMFL--RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           WN +++  + +  +  AV  L   QM +  ++P+  ++ ++LP  +    L  G  +HAY
Sbjct: 194 WNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 309 ALRNDI---------LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
            +R  +         L D   +G+AL+DMY  C  +   RRVFD +  +    W+A+I G
Sbjct: 254 CIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGG 313

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           +       +A +LF  M      + + T+++S + AC   +     E +H    K G+  
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D    N+L+ MY++ G I+ +  +FD+M V+DTVS++ +++GY   G+  +A ++ ++MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
               E                 P++ T+++++P C  L+AL  G+  H   I   LA++ 
Sbjct: 434 ACNVE-----------------PDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + +AL+DMYAKCG ++ +R+VF++MP R++++WN +I  YG+HG G+E   L   M   
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 536

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G       P+ VTFI L +ACSHSG+V EG   F+ M   YG+ P  +HY C+VDLL R 
Sbjct: 537 G-----FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 591

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G +++AY+ I  MP   D    W +LLGACR+++N+++G+  ++ +  L P+   ++VLL
Sbjct: 592 GFLDEAYEFIQSMPLRAD-VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIYS+A  +D+A +VR   K  G +K PGCSWIE    +H F+ GD SH QS +++  L
Sbjct: 651 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           +N+   ++K GY PDTS VL ++ EEEKE  L  HSEKLAIA+GIL+     TI V KNL
Sbjct: 711 DNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNL 770

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH   K IS ++ R II+RD  RFHHFKNG CSCGD+W
Sbjct: 771 RVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 276/563 (49%), Gaps = 57/563 (10%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M R  + P+N+ FP  LKA + + D   G+ IH H +  G   + + V+  L++MY 
Sbjct: 113 YRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYV 171

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA---LEAFRMMLYSNVEPSSF 181
           KC   + D   +F  +  +D V+WN+M+A     G +  A   L + +M ++  + P++ 
Sbjct: 172 KCAC-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH-RLRPNAS 229

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-----------NTFIMNALMAMYAKL 230
           TLV++      L+++  L  G  VH   +R                  +  AL+ MYAK 
Sbjct: 230 TLVAL---LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 286

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG---IKPDGVSIA 287
           G +  A+ +F +   R+ V+W+ ++       +  +A +  + M  +G   + P   SIA
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIA 344

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S L AC+ L+ L  G+++HA   ++ +  D +  G++L+ MY     ++    +FD ++ 
Sbjct: 345 SALRACASLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAV 403

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K    ++A+++GY QN   EEA ++F KM +   + P+A TM S++PAC    A      
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRC 462

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
            HG  I  GL  +  + NAL+DMY++ GRI++S+ +F+ M  RD VSWNTMI GY I G 
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI- 526
             +A  L  EM N                 L   P+ +T + +L  C     + +GK   
Sbjct: 523 GKEATALFLEMNN-----------------LGFPPDGVTFICLLSACSHSGLVIEGKHWF 565

Query: 527 ----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYG 581
               H Y +   +   +     +VD+ ++ G L+ A      MP+R +V  W  ++ A  
Sbjct: 566 HVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621

Query: 582 MHGE---GQEVLELLKNMVAEGS 601
           ++     G++V  +++ +  EG+
Sbjct: 622 VYKNIDLGKKVSRMIQELGPEGT 644


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/717 (38%), Positives = 433/717 (60%), Gaps = 35/717 (4%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE--WNTFIMNALMAMYA 228
           ML   V+ +  T ++V    +++   D LR G+ +H + +R  E   + F+  AL+  Y 
Sbjct: 1   MLLEGVKANVITFLNV---LNSVVDPDALRKGKFIH-SCVRESEHSLDVFVNTALVNTYT 56

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G + DA+ +F     R + +WN+++S+ S +++  EA    ++M   G + D V+  S
Sbjct: 57  KCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLS 116

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L AC + E L  GK +          +D  FVG+AL+ MY  CR  E   +VF  +  K
Sbjct: 117 ILDACVNPENLQHGKHVRESISETSFELD-LFVGTALITMYARCRSPENAAQVFGRMKQK 175

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  W+A+IT +  + +  EAL  F +M +  G+ PN  T  S++          +   I
Sbjct: 176 NLITWSAIITAFADHGHCGEALRYF-RMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 234

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSR--MGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
           H    + GL     + NAL+++Y R   G +++++ I  +M+ +   +WN +I GYT+ G
Sbjct: 235 HLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHG 294

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP-NSITLMTVLPGCGALSALAKGKE 525
           +  +AL   + +Q                  L   P + +T ++VL  C + ++LA+GK 
Sbjct: 295 RSREALETYQRLQ------------------LEAIPVDKVTFISVLNACTSSTSLAEGKM 336

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH+ A+   L +DV+V +AL +MY+KCG +  ARR+FD MP+R+ ++WN ++ AY  HGE
Sbjct: 337 IHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGE 396

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +EVL+L++ M  EG     VK N +TF+++ ++CSH+G+++EG   F+ +  D GIE  
Sbjct: 397 SEEVLKLIRKMEQEG-----VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVK 451

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C+VDLLGRAGK+++A + I+ MP E +    W+SLLGACR+H++++ G++AA+ L
Sbjct: 452 TEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIV-TWASLLGACRVHKDLDRGKLAARKL 510

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             L+P  +S  V+LSNIYS    W  A  +R+ M    V+K PG S I+  +++H+F   
Sbjct: 511 LELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVR 570

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH ++ +++  +E L   MR+ GYVPDT  VLH+V+EE+KE+LL  HSEKLAIAFG++
Sbjct: 571 DTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLI 630

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +TP  +++ + KNLRVC DCH ATKFISKI  REI++RD  RFHHF++G+CSC DYW
Sbjct: 631 STPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 251/516 (48%), Gaps = 29/516 (5%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++ +   F  VL +V     L  GK IH+ V +  + L  V V   LVN Y KCGS + D
Sbjct: 6   VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLD-VFVNTALVNTYTKCGS-LTD 63

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             KVFD +  +   +WNSMI+      +   A   F+ M +        T +S+  AC N
Sbjct: 64  ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123

Query: 193 LSRRDGLRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               + L+ G+ V  + S    E + F+  AL+ MYA+    ++A  +F   + ++L++W
Sbjct: 124 ---PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           + I+++ + +    EA+ + R M   GI P+ V+  S+L   +    L+    IH     
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 312 NDILIDNSFVGSALVDMYCNCR--EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           +  L D + + +ALV++Y  C   E++    +   + +++I  WN +I GY  +    EA
Sbjct: 241 HG-LDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L  + ++ ++  +  +  T  SV+ AC  S +  + + IH +A++ GL  D  V+NAL +
Sbjct: 300 LETYQRL-QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MYS+ G +E ++ IFD M +R  VSWN M+  Y    QHG++  +L+ ++ ME+E     
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAY---AQHGESEEVLKLIRKMEQEG---- 411

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDM 548
                      K N IT ++VL  C     +A+G +  H+      +         LVD+
Sbjct: 412 ----------VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 461

Query: 549 YAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
             + G L  A +    MP    ++TW  ++ A  +H
Sbjct: 462 LGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH 497



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 212/450 (47%), Gaps = 35/450 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   +W   + + + S +  EA   +  M     + D   F ++L A    ++L  
Sbjct: 70  GMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQH 129

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK +   + +  + L  + V   L+ MY +C S   +  +VF R+ +K+ ++W+++I   
Sbjct: 130 GKHVRESISETSFELD-LFVGTALITMYARCRSPE-NAAQVFGRMKQKNLITWSAIITAF 187

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
              G    AL  FRMM    + P+  T +S+    +  +   GL    ++H      G  
Sbjct: 188 ADHGHCGEALRYFRMMQQEGILPNRVTFISL---LNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 216 NTFIM-NALMAMYAK--LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
           +T  M NAL+ +Y +   G +D A+ + +  +++ + +WN +++  + + +  EA+   +
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDM 328
           ++ L  I  D V+  SVL AC+    L  GK IH+ A    L +D+++ N     AL +M
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKN-----ALTNM 359

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  +E  RR+FD +  +    WN M+  Y Q+   EE L L  KME+  G+  N  T
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ-EGVKLNGIT 418

Query: 389 MSSVVPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISK 441
             SV+ +C  S A    EG  + H+    LG DR ++        L+D+  R G+++ ++
Sbjct: 419 FVSVLSSC--SHAGLIAEGCQYFHS----LGHDRGIEVKTEHYGCLVDLLGRAGKLQEAE 472

Query: 442 TIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
                M    + V+W +++     C  H D
Sbjct: 473 KYISKMPSEPEIVTWASLLGA---CRVHKD 499


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/813 (35%), Positives = 465/813 (57%), Gaps = 44/813 (5%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-- 140
           +LK     ++  LGK +H  +      L ++ + N+L+ +Y K  +D    + +F  +  
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLL-NSLITLYSK-SNDPITAFSIFQSMEN 115

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +++D VS++S+I+          A+E F +++L   V P+ +   +V  AC    +    
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACL---KGGFF 172

Query: 200 RLGRQVHGNSLRVGEWNTFIMNA--LMAMYAK---LGRVDDAKTLFKSFEDRDLVSWNTI 254
           + G  + G  L+ G +++ +     L+ M+ K   L  ++ A+ +F    ++++V+W  +
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 255 VSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++ L+Q     EA+ +FL  +   G  PD  ++  ++  C+ ++ L  GKE+H++ +R+ 
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY--GQNEYDEEALM 371
           +++D   VG +LVDMY  C  V+  R+VFD + +  +  W A++ GY  G   Y+ EA+ 
Sbjct: 293 LVLDLC-VGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMR 351

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M    G+ PN  T S V+ AC     F   E +HG  IKLGL     V N L+ +Y
Sbjct: 352 MFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVY 411

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ GR+E ++  FD +  ++ VS  T++    +                  ++ N N+  
Sbjct: 412 AKSGRMESARKCFDVLFEKNLVS-ETVVDDTNV------------------KDFNLNSEQ 452

Query: 492 DLDETV--LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
           DLD  V  +    +S T  ++L G   +  + KG++IHA  ++    TD+ V +AL+ MY
Sbjct: 453 DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMY 512

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +KCG    A +VF+ M   NVITW  II  +  HG   + LEL  NM+  G     VKPN
Sbjct: 513 SKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG-----VKPN 567

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           +VT+IA+ +ACSH G++ E    F  M+D++GI P  +HYAC+VDLLGR+G + +A + I
Sbjct: 568 DVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFI 627

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           N MP + D A  W + LG+CR+H+N ++GE AA+ +   EP   + Y+LLSN+Y++   W
Sbjct: 628 NSMPFDAD-ALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRW 686

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           +    +RK MK+  + KE G SWIE  +++HKF  GD  H +++Q++  L+ L+ +++  
Sbjct: 687 EDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNV 746

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVP+T  VLH+V +E+KE  L  HSEKLA+AF +++TP    IRV KNLRVC DCH A 
Sbjct: 747 GYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAI 806

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K+IS +  REI++RD  RFHH K+GTCSC DYW
Sbjct: 807 KYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 282/752 (37%), Positives = 437/752 (58%), Gaps = 30/752 (3%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFDRI   D  ++N++I      G +  A++ +R MLY  V P+ +T   V  ACS L+
Sbjct: 54  QVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALA 113

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  GR +H ++  VG   + F+  AL+ +Y +  R   A  +F     RD+V+WN 
Sbjct: 114 ---DLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNA 170

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++  + +  +  A+  L  M  RG ++P+  ++ S+LP  +    L  G  +HAY LR 
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230

Query: 313 --DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
             D   +   +G+AL+DMY  C+ +    RVF  ++ +    W+A+I G+   +   EA 
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF  M      + +AT+++S +  C           +H    K G+  D    N+L+ M
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++ G I  +  +FD++ ++DT+S+  +++GY   G+  +A ++ ++MQ         NV
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC-------NV 403

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                     +P+  T+++++P C  L+AL  G+  H   I   LA +  + ++L+DMYA
Sbjct: 404 ----------QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYA 453

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG ++ +R+VFD MP R++++WN +I  YG+HG G+E   L  +M  +G      +P++
Sbjct: 454 KCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG-----FEPDD 508

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTFI L AACSHSG+V+EG   F  M   YGI P  +HY C+VDLL R G +++AYQ I 
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP + D    W +LLGACRIH+N+++G+  ++ +  L P+   ++VLLSNI+S+A  +D
Sbjct: 569 SMPLKAD-VRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFD 627

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           +A +VR   K  G +K PGCSWIE    +H F+ GD SH  S  ++  L+N+   ++K G
Sbjct: 628 EAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLG 687

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y  DTS VL ++ EEEKE  L  HSEKLAIAFG+L+     TI V KNLRVC DCH A K
Sbjct: 688 YQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIK 747

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +++ + +R II+RD  RFHHFKNG CSCGD+W
Sbjct: 748 YMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 274/583 (46%), Gaps = 46/583 (7%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P    R   + I   R+ +    F  AI  Y  M    + P+ + FP VLKA + + DL
Sbjct: 59  IPAPDARAYNALI---RAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADL 115

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G+ IHAH    G   + + V+  L+++Y +C +       VF ++  +D V+WN+M+A
Sbjct: 116 CAGRTIHAHAAAVGLH-TDLFVSTALIDLYIRC-ARFGPAANVFAKMPMRDVVAWNAMLA 173

Query: 154 TLCRFGKWDLAL-EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                G +  A+     M     + P++ TLVS+      L++   L  G  VH   LR 
Sbjct: 174 GYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSL---LPLLAQHGALFQGTSVHAYCLRA 230

Query: 213 ----GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
                E    I  AL+ MYAK   +  A  +F     R+ V+W+ ++      D+  EA 
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290

Query: 269 MFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
              + M + G+      S+AS L  C+ L  L  G ++HA   ++ I  D +  G++L+ 
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLT-AGNSLLS 349

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +     +FD I+ K    + A+++GY QN   EEA ++F KM +   + P+  
Sbjct: 350 MYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM-QACNVQPDIA 408

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM S++PAC    A       HG  I  GL  +  + N+L+DMY++ GRI++S+ +FD M
Sbjct: 409 TMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKM 468

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWNTMI GY I G   +A  L   M+N   E                 P+ +T 
Sbjct: 469 PARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFE-----------------PDDVTF 511

Query: 508 MTVLPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           + ++  C     + +GK       H Y I   +   +     +VD+ A+ G L+ A +  
Sbjct: 512 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGFLDEAYQFI 567

Query: 563 DLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
             MP++ +V  W  ++ A  +H     G++V  +++ +  EG+
Sbjct: 568 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGT 610



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 239/504 (47%), Gaps = 48/504 (9%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G++  A+ +F      D  ++N ++ + S    F  A+   R M    + P+  +   VL
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            ACS L  L  G+ IHA+A    +  D  FV +AL+D+Y  C        VF  +  + +
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTD-LFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAM+ GY  +     A+   + M++  GL PNA+T+ S++P   +  A      +H 
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225

Query: 411 HAIKLGLGRDR---YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           + ++  L ++     +  AL+DMY++   +  +  +F  M VR+ V+W+ +I G+ +C +
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +A  L ++M              L E +      S+   + L  C +L+ L  G ++H
Sbjct: 286 MTEAFNLFKDM--------------LVEGMCFLSATSVA--SALRVCASLADLRMGTQLH 329

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A   ++ +  D+  G++L+ MYAK G +N A  +FD + +++ I++  ++  Y  +G+ +
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAE 389

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH-----SGMVSEGMDLFYKMKDDYGI 642
           E   + K M A       V+P+  T ++L  ACSH      G  S G  +   +  +  I
Sbjct: 390 EAFLVFKKMQA-----CNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI 444

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             S      ++D+  + G+++ + Q+ + MP       +W++++    IH    +G+  A
Sbjct: 445 CNS------LIDMYAKCGRIDLSRQVFDKMPAR--DIVSWNTMIAGYGIHG---LGK-EA 492

Query: 703 QNLFL------LEPDVASHYVLLS 720
             LFL       EPD  +   L++
Sbjct: 493 TTLFLSMKNQGFEPDDVTFICLIA 516


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/850 (35%), Positives = 463/850 (54%), Gaps = 53/850 (6%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ-DLSLGKQIHAH 102
            SW   + +   + +  +A+  +  +    ++P++     +L A+A    D    ++ H  
Sbjct: 301  SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGR 360

Query: 103  VVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEK-DQVSWNSMIATLCRFG 159
            + + GY L  V V N +++MY KCG  S  W V++   RI  K D +SWN+M+       
Sbjct: 361  IWESGY-LRDVVVGNAIISMYAKCGFFSAAWTVFR---RIRWKCDVISWNTMLGASEDRK 416

Query: 160  KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNT 217
             +   +  F  ML + ++P+  + +++  ACSN    + L  GR++H   L  R     +
Sbjct: 417  SFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN---SEALDFGRKIHSLILTRRRDYVES 473

Query: 218  FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             +   L++MY K G + +A+ +FK      R LV+WN ++ + +QND+  EA   L +M 
Sbjct: 474  SVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 276  LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL---IDNSFVGSALVDMYCNC 332
              G+ PD +S  SVL +C   +         A  LR  IL     ++ + +AL+ M+  C
Sbjct: 534  QGGVLPDALSFTSVLSSCYCSQ--------EAQVLRMCILESGYRSACLETALISMHGRC 585

Query: 333  REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            RE+E  R VFD +    +  W AM++   +N   +E   LF +M+ + G+ P+  T+++ 
Sbjct: 586  RELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQ-LEGVIPDKFTLATT 644

Query: 393  VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
            +  C+ S      + IH    ++GL  D  V+NAL++MYS  G    + + F+ M+ RD 
Sbjct: 645  LDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704

Query: 453  VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
            VSWN M   Y   G   +A++L R MQ                 +   KP+ +T  T L 
Sbjct: 705  VSWNIMSAAYAQAGLAKEAVLLFRHMQ-----------------LEGVKPDKLTFSTTLN 747

Query: 513  GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              G  + ++ GK  H  A  + L +DV V + LV +YAKCG L+ A  +F       V+ 
Sbjct: 748  VSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVL 807

Query: 573  WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
             N II A   HG  +E +++   M  EG     V+P+  T +++ +AC H+GMV EG   
Sbjct: 808  LNAIIGALAQHGFSEEAVKMFWKMQQEG-----VRPDVATLVSIISACGHAGMVEEGCSS 862

Query: 633  FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            F  MK+ +GI P+ +HYAC VDLLGRAG++E A Q+I  MP E D    W+SLLG C++ 
Sbjct: 863  FLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFE-DNTLVWTSLLGTCKLQ 921

Query: 693  QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
             + E+GE  AQ +  L+P  ++ +V+LSNIY +   W  A   RKK+ +  V+  PG SW
Sbjct: 922  GDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSW 981

Query: 753  IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
            +E G ++H+F+AGD SH Q+++++  L+ L   MR+ GY  D      +  +E KE  L 
Sbjct: 982  LEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGL---DAEDELKEKALG 1038

Query: 813  GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
             HSE++AIAFG++ TPP TT+++ KNLRVC DCH ATK+IS I  REII+RD  RFHHF 
Sbjct: 1039 YHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFS 1098

Query: 873  NGTCSCGDYW 882
            NGTCSC D W
Sbjct: 1099 NGTCSCKDCW 1108



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 192/672 (28%), Positives = 318/672 (47%), Gaps = 55/672 (8%)

Query: 24  PPATTATSLPLPGSQTRCKESWIESLRSEARSNQFR-EAILSYIEMTRSDIQPDNFAFPA 82
           P    A  L +P        SW     + A+  +F  +A+  + EM    + P+   F  
Sbjct: 182 PEDAIAVFLTIPEKDV---VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFIT 238

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRI 140
            L A   ++D   G  +H+ + + G G   +   N L+NMYGKCG     + V+K     
Sbjct: 239 ALGACTSLRD---GTWLHSLLHEAGLGFDPLA-GNALINMYGKCGDWEGAYGVFKAMASR 294

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV--ALACSNLSRRDG 198
            E D VSWN+MI+     G+   A+  FR +    + P+S TL+++  ALA S +     
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD---- 350

Query: 199 LRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVS 256
               R+ HG     G     ++ NA+++MYAK G    A T+F+    + D++SWNT++ 
Sbjct: 351 FGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLG 410

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           +      F + V     M L GI P+ VS  ++L ACS+ E LD G++IH+  L      
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             S V + LV MY  C  +     VF    +  + +  WN M+  Y QN+  +EA    +
Sbjct: 471 VESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALM 530

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M +  G+ P+A + +SV+ +C  S+   + + +    ++ G  R   ++ AL+ M+ R 
Sbjct: 531 EMLQ-GGVLPDALSFTSVLSSCYCSQ---EAQVLRMCILESGY-RSACLETALISMHGRC 585

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
             +E ++++FD+M+  D VSW  M++         +   L R MQ             L+
Sbjct: 586 RELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQ-------------LE 632

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +    P+  TL T L  C   + L  GK IHA      L  D+ V +AL++MY+ CG 
Sbjct: 633 GVI----PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGD 688

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
              A   F+ M  R++++WN++  AY   G  +E + L ++M  EG     VKP+++TF 
Sbjct: 689 WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG-----VKPDKLTFS 743

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
                   S +VS+G  LF+ +  + G++        +V L  + GK+++A  L      
Sbjct: 744 TTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISL------ 796

Query: 675 EFDKAGAWSSLL 686
            F  A  W+ +L
Sbjct: 797 -FRGACQWTVVL 807



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 286/569 (50%), Gaps = 51/569 (8%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            R D   D   + A+L++     DL+ GK+ H  +   G     + + N L+NMY +CGS
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLE-QHLFLGNCLINMYVRCGS 75

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR-MMLYSNVEPSSFTLVSVA 187
            + + + +F ++ E++ VSW ++I+   + G +  A   FR M+L S+  P+S+TLV++ 
Sbjct: 76  -LEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAML 134

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-----EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            AC+N   RD L +GR +H     +G        T + NA++ MYAK G  +DA  +F +
Sbjct: 135 NACAN--SRD-LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLT 191

Query: 243 FEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
             ++D+VSW  +  + +Q  +F  +A+   R+M L+ + P+ ++  + L AC+ L     
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR---D 248

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK---IALWNAMIT 358
           G  +H+  L    L  +   G+AL++MY  C + E    VF  ++ ++   +  WNAMI+
Sbjct: 249 GTWLHSL-LHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMIS 307

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA-FPDKEGIHGHAIKLGL 417
              +     +A+ +F ++  + G+ PN+ T+ +++ A   S   F      HG   + G 
Sbjct: 308 ASVEAGRHGDAMAIFRRL-RLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGY 366

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
            RD  V NA++ MY++ G    + T+F  +  + D +SWNTM+                 
Sbjct: 367 LRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS-------------- 412

Query: 477 EMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAI-RN 533
                E+ K+   V +    +L     PN ++ + +L  C    AL  G++IH+  + R 
Sbjct: 413 -----EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQEVLE 591
               +  V + LV MY KCG +  A  VF  MP+  R+++TWNV++ AY  +   +E   
Sbjct: 468 RDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
            L  M+      G V P+ ++F ++ ++C
Sbjct: 528 ALMEMLQ-----GGVLPDALSFTSVLSSC 551



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 162/562 (28%), Positives = 265/562 (47%), Gaps = 53/562 (9%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G++ H      G E + F+ N L+ MY + G +++A  +F   E+R++VSW  ++S+ +Q
Sbjct: 44  GKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103

Query: 261 NDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN- 318
           +  F  A    R M L     P+  ++ ++L AC++   L  G+ IHA      +  ++ 
Sbjct: 104 SGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLEREST 163

Query: 319 --SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN-EYDEEALMLFIK 375
             + VG+A+++MY  C   E    VF  I +K +  W AM   Y Q   +  +AL +F +
Sbjct: 164 TATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M  +  L PN  T  + + AC    +  D   +H    + GLG D    NAL++MY + G
Sbjct: 224 M-LLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCG 279

Query: 436 RIEISKTIFDDMEVR---DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
             E +  +F  M  R   D VSWN MI+     G+HGDA+ + R ++             
Sbjct: 280 DWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR------------- 326

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
               +   +PNS+TL+T+L    A        ++ H     +    DVVVG+A++ MYAK
Sbjct: 327 ----LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAK 382

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           CG  + A  VF  +  + +VI+WN ++ A        +V+    +M+  G     + PN+
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG-----IDPNK 437

Query: 611 VTFIALFAACSHSGMVSEGM---DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           V+FIA+  ACS+S  +  G     L    + DY +E S      +V + G+ G + +A  
Sbjct: 438 VSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSV--ATMLVSMYGKCGSIAEAEL 494

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE----PDVASHYVLLSNIY 723
           +   MP        W+ +LGA    QN    E     + +L+    PD  S   +LS+ Y
Sbjct: 495 VFKEMPLPSRSLVTWNVMLGA--YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552

Query: 724 SSAQLWDKAMDVRKKMKEMGVR 745
            S +    A  +R  + E G R
Sbjct: 553 CSQE----AQVLRMCILESGYR 570



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 293/648 (45%), Gaps = 60/648 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   + + A+S  F  A   +  M   S   P+++   A+L A A  +DL++G+ IHA 
Sbjct: 93  SWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAM 152

Query: 103 VVKYGYGLSSVT---VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC--- 156
           + + G    S T   V N ++NMY KCGS   D   VF  I EKD VSW +M        
Sbjct: 153 IWELGLERESTTATLVGNAMINMYAKCGSPE-DAIAVFLTIPEKDVVSWTAMAGAYAQER 211

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           RF  +  AL  FR ML   + P+  T ++   AC++L  RDG  L   +H   L    ++
Sbjct: 212 RF--YPDALRIFREMLLQPLAPNVITFITALGACTSL--RDGTWLHSLLHEAGL---GFD 264

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
               NAL+ MY K G  + A  +FK+   R   DLVSWN ++S+  +  +  +A+   R+
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 274 MALRGIKPDGVSIASVLPACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           + L G++P+ V++ ++L A +   +     ++ H     +  L D   VG+A++ MY  C
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRD-VVVGNAIISMYAKC 383

Query: 333 REVECGRRVFDFISDK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
                   VF  I  K  +  WN M+      +   + +  F  M  +AG+ PN  +  +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHM-LLAGIDPNKVSFIA 442

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDR-YVQNA----LMDMYSRMGRIEISKTIFDD 446
           ++ AC  SEA      IH     L L R R YV+++    L+ MY + G I  ++ +F +
Sbjct: 443 ILNACSNSEALDFGRKIH----SLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498

Query: 447 MEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           M +  R  V+WN M+  Y    +  +A   L EM              L   VL   P++
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM--------------LQGGVL---PDA 541

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           ++  +VL  C      ++  ++    I         + +AL+ M+ +C  L  AR VFD 
Sbjct: 542 LSFTSVLSSC----YCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDE 597

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M   +V++W  ++ A   + + +EV  L + M  EG     V P++ T       C  S 
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEG-----VIPDKFTLATTLDTCLDST 652

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            +  G  + +    + G+E        ++++    G   +A      M
Sbjct: 653 TLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 225/463 (48%), Gaps = 24/463 (5%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           +PLP   +R   +W   L + A++++ +EA  + +EM +  + PD  +F +VL +    Q
Sbjct: 499 MPLP---SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           +    + +   +++ GY   S  +   L++M+G+C  ++     VFD +   D VSW +M
Sbjct: 556 E---AQVLRMCILESGY--RSACLETALISMHGRC-RELEQARSVFDEMDHGDVVSWTAM 609

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           ++       +      FR M    V P  FTL +    C + +    L LG+ +H     
Sbjct: 610 VSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT---LGLGKIIHACVTE 666

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G E +  + NAL+ MY+  G   +A + F++ + RDLVSWN + ++ +Q     EAV+ 
Sbjct: 667 IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R M L G+KPD ++ ++ L       ++  GK  H  A  + +  D S V + LV +Y 
Sbjct: 727 FRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVS-VATGLVKLYA 785

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C +++    +F       + L NA+I    Q+ + EEA+ +F KM++  G+ P+  T+ 
Sbjct: 786 KCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ-EGVRPDVATLV 844

Query: 391 SVVPACVRSEAFPDKEGIHGH-AIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           S++ AC    A   +EG      +K   G    +++    +D+  R G++E ++ I   M
Sbjct: 845 SIISAC--GHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKM 902

Query: 448 EVRD-TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
              D T+ W +++     C   GDA +  R  Q + E    N+
Sbjct: 903 PFEDNTLVWTSLL---GTCKLQGDAELGERCAQRILELDPHNS 942



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 37/410 (9%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           ++L +C     L  GK  H   + N  L  + F+G+ L++MY  C  +E    +F  + +
Sbjct: 30  ALLQSCVDSNDLAKGKRAHEL-IANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W A+I+   Q+     A  LF  M   +   PN+ T+ +++ AC  S        
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 408 IHGHAIKLGLGRDR----YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           IH    +LGL R+      V NA+++MY++ G  E +  +F  +  +D VSW  M   Y 
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYA 208

Query: 464 ICGQ-HGDALMLLREMQNMEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALA 521
              + + DAL + REM                  +L+P  PN IT +T L   GA ++L 
Sbjct: 209 QERRFYPDALRIFREM------------------LLQPLAPNVITFITAL---GACTSLR 247

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR---NVITWNVIIM 578
            G  +H+      L  D + G+AL++MY KCG    A  VF  M  R   ++++WN +I 
Sbjct: 248 DGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMIS 307

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A    G   + + + + +  EG R     PN VT I +  A + SG+       F+    
Sbjct: 308 ASVEAGRHGDAMAIFRRLRLEGMR-----PNSVTLITILNALAASGVDFGAARKFHGRIW 362

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           + G          ++ +  + G    A+ +   +  + D   +W+++LGA
Sbjct: 363 ESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVI-SWNTMLGA 411



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 33/306 (10%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           ++++ +CV S      +  H      GL +  ++ N L++MY R G +E +  IF  ME 
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ VSW  +I+     G    A  L R M              L E+     PNS TL+ 
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTM--------------LLES--SAAPNSYTLVA 132

Query: 510 VLPGCGALSALAKGKEIHA----YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           +L  C     LA G+ IHA      +     T  +VG+A+++MYAKCG    A  VF  +
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTI 192

Query: 566 PVRNVITWNVIIMAYGMHGEGQ-EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           P ++V++W  +  AY        + L + + M+ +      + PN +TFI    AC+   
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQ-----PLAPNVITFITALGACTS-- 245

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP--EFDKAGAW 682
            + +G  L + +  + G+   P     ++++ G+ G  E AY +   M    E D   +W
Sbjct: 246 -LRDGTWL-HSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLV-SW 302

Query: 683 SSLLGA 688
           ++++ A
Sbjct: 303 NAMISA 308


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 37/664 (5%)

Query: 231  GRVDDAK--TLFKSFEDRDLV-SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
            GR D +   T F  + D+  V SWN++++ L++    +EA+     +   G+ P   S  
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFP 2019

Query: 288  SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
              + +CS L  L +G+  H  A       D  FV SAL+DMY  C +++  R +FD I  
Sbjct: 2020 CTIKSCSALCDLVSGRMSHQQAFVFGFETD-LFVSSALIDMYSKCGQLKDARALFDEIPL 2078

Query: 348  KKIALWNAMITGYGQNEYDEEALMLF-------IKMEEVAGLWPNATTMSSVVPACVRSE 400
            + +  W +MITGY QNE  + AL+LF        ++E+   +  ++  M SV+ AC R  
Sbjct: 2079 RNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVS 2138

Query: 401  AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                 EG+HG  +K G      V N LMD Y++ G+  +SK +FD ME +D +SWN+MI 
Sbjct: 2139 GKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIA 2198

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
             Y   G  G+AL +   M                   +  + N++TL  VL  C    AL
Sbjct: 2199 VYAQSGLSGEALEVFHGMVRH----------------VGVRYNAVTLSAVLLACAHAGAL 2242

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
              GK IH   I+  L  +V VG++++DMY KCG +  A++ FD M  +NV +W  ++  Y
Sbjct: 2243 RAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGY 2302

Query: 581  GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            GMHG  +E L++   MV  G     VKPN +TF+++ AACSH+G+V EG   F  MK  Y
Sbjct: 2303 GMHGRAKEALDIFYKMVRAG-----VKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 2357

Query: 641  GIEPSPDHYACVVDLLGRAGKVEDAYQLIN--MMPPEFDKAGAWSSLLGACRIHQNVEIG 698
             IEP  +HY C+VDL GRAG + +AY LI    M P+F     W SLLGACRIH+NV++G
Sbjct: 2358 DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF---VVWGSLLGACRIHKNVDLG 2414

Query: 699  EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
            EIAAQ LF L+PD   +YVLLSN+Y+ A  W     +R  MK   + K PG S +E    
Sbjct: 2415 EIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGR 2474

Query: 759  IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
            +H FL GD  H   E ++ +LE L+  ++K GYVP+ + VLH+V+EEEKE +L  HSEKL
Sbjct: 2475 VHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKL 2534

Query: 819  AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
            A+AFG++N+ PGTTI + KNLRVC DCH   K ISK+  R+ ++RD +RFHHFK+G CSC
Sbjct: 2535 AVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSC 2594

Query: 879  GDYW 882
            GDYW
Sbjct: 2595 GDYW 2598



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 207/425 (48%), Gaps = 40/425 (9%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C + + L   ++IHA  +R+  L ++  +   L+ +Y     +     +F  I + 
Sbjct: 33  LLQNCKNFKHL---RQIHAKIIRSG-LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WN +I     N   E+ALML+  M    G+  +  T   V+ AC    +    + +
Sbjct: 89  CTFTWNLIIRANTINGLSEQALMLYKNMV-CQGIAADKFTFPFVIKACTNFLSIDLGKVV 147

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG  IK G   D +VQN L+D Y + G    +  +F+ M VR+ VSW T+I+G   CG  
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207

Query: 469 GDALMLLREM----------------QNMEEEKNRNNVYDLD-ETVLRPKPNSITLMTVL 511
            +A  +  E+                +N + E+       +  E +    PN  T+++++
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF---PNEYTMVSLI 264

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  +  L  G+ IH YAI+N +   V +G+AL+DMY+KCG +  A  VF+ MP +++ 
Sbjct: 265 KACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP 324

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN +I + G+HG GQE L L   M         VKP+ +TFI +  AC H   V EG  
Sbjct: 325 TWNSMITSLGVHGLGQEALNLFSEM-----ERVNVKPDAITFIGVLCACVHIKNVKEGCA 379

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ-------LINMMPPEFD---KAGA 681
            F +M   YGI P P+HY C+ +L  R+  +++A++       L N     FD   K  A
Sbjct: 380 YFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVA 439

Query: 682 WSSLL 686
           W+ LL
Sbjct: 440 WTQLL 444



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 240/501 (47%), Gaps = 52/501 (10%)

Query: 137  FDRITEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
            F +  +K  V SWNS+IA L R G    AL AF  +    + P+  +      +CS L  
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALC- 2029

Query: 196  RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
               L  GR  H  +   G E + F+ +AL+ MY+K G++ DA+ LF     R++VSW ++
Sbjct: 2030 --DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087

Query: 255  VSSLSQNDKFLEAVMFLRQMALR--------GIKPDGVSIASVLPACSHLEMLDTGKEIH 306
            ++   QN++   A++  +              +  D V + SVL ACS +      + +H
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 2147

Query: 307  AYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
             + ++     D S  VG+ L+D Y  C +    ++VFD++ +K    WN+MI  Y Q+  
Sbjct: 2148 GFVVKKG--FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205

Query: 366  DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
              EAL +F  M    G+  NA T+S+V+ AC  + A    + IH   IK+ L  +  V  
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265

Query: 426  ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
            +++DMY + GR+E++K  FD M+ ++  SW  M+ GY + G+  +AL +  +M       
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV------ 2319

Query: 486  NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSA 544
             R  V          KPN IT ++VL  C     + +G    +A   +  +   +     
Sbjct: 2320 -RAGV----------KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC 2368

Query: 545  LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH-----GE--GQEVLE----- 591
            +VD++ + GCLN A  +   M ++ + + W  ++ A  +H     GE   Q++ E     
Sbjct: 2369 MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDN 2428

Query: 592  -----LLKNMVAEGSRGGEVK 607
                 LL N+ A+  R  +V+
Sbjct: 2429 CGYYVLLSNLYADAGRWADVE 2449



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 224/432 (51%), Gaps = 27/432 (6%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   AR     EA+ ++  + +  + P   +FP  +K+ + + DL  G+  H   
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              +G+  + + V++ L++MY KCG  + D   +FD I  ++ VSW SMI    +  + D 
Sbjct: 2042 FVFGFE-TDLFVSSALIDMYSKCGQ-LKDARALFDEIPLRNVVSWTSMITGYVQNEQADN 2099

Query: 164  ALEAFRMMLY--------SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            AL  F+  L         +NV   S  +VSV  ACS +S   G  +   VHG  ++ G +
Sbjct: 2100 ALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVS---GKGITEGVHGFVVKKGFD 2156

Query: 215  WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
             +  + N LM  YAK G+   +K +F   E++D +SWN++++  +Q+    EA+     M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 275  ALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
                G++ + V++++VL AC+H   L  GK IH   ++ D L  N  VG++++DMYC C 
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVGTSIIDMYCKCG 2275

Query: 334  EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
             VE  ++ FD + +K +  W AM+ GYG +   +EAL +F KM   AG+ PN  T  SV+
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR-AGVKPNYITFVSVL 2334

Query: 394  PACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
             AC  S A   +EG H      H   +  G + Y    ++D++ R G +  +  +   M+
Sbjct: 2335 AAC--SHAGLVEEGWHWFNAMKHKYDIEPGIEHY--GCMVDLFGRAGCLNEAYNLIKRMK 2390

Query: 449  VR-DTVSWNTMI 459
            ++ D V W +++
Sbjct: 2391 MKPDFVVWGSLL 2402



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 59/357 (16%)

Query: 203 RQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQ+H   +R G  N   +   L+ +Y+  GR+  A  LF   ++    +WN I+ + + N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILID 317
               +A+M  + M  +GI  D  +   V+ AC++   +D GK +H     Y    D+ + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 318 NSFVGSALVDMYCNCRE--------------------------VECG-----RRVFDFIS 346
           N+     L+D Y  C                            + CG     RR+FD I 
Sbjct: 164 NN-----LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  W AMI GY +N+  EEAL LF +M+    ++PN  TM S++ AC          
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQ-AENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
           GIH +AIK  +    Y+  AL+DMYS+ G I+ +  +F+ M  +   +WN+MIT   + G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              +AL L  EM+       R NV          KP++IT + VL  C  +  + +G
Sbjct: 338 LGQEALNLFSEME-------RVNV----------KPDAITFIGVLCACVHIKNVKEG 377



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 35/296 (11%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q  C  +W   +R+   +    +A++ Y  M    I  D F FP V+KA      + LGK
Sbjct: 86  QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCG------------------------------ 127
            +H  ++KYG+    V V N L++ Y KCG                              
Sbjct: 146 VVHGSLIKYGFS-GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISC 204

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+ +  ++FD I  K+ VSW +MI    R  + + ALE F+ M   N+ P+ +T+VS+ 
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264

Query: 188 LACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC+ +     L LGR +H  +++   E   ++  AL+ MY+K G + DA  +F++   +
Sbjct: 265 KACTEMGI---LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            L +WN++++SL  +    EA+    +M    +KPD ++   VL AC H++ +  G
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 160/333 (48%), Gaps = 39/333 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIHA +++ G     + +   L+++Y   G   + +  +F +I      +WN +I    
Sbjct: 44  RQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAIL-LFYQIQNPCTFTWNLIIRANT 101

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
             G  + AL  ++ M+   +    FT   V  AC+N    D   LG+ VHG+ ++ G   
Sbjct: 102 INGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSID---LGKVVHGSLIKYGFSG 158

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL----------------- 258
           + F+ N L+  Y K G    A  +F+    R++VSW T++S L                 
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 259 --------------SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                          +N +  EA+   ++M    I P+  ++ S++ AC+ + +L  G+ 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IH YA++N I I   ++G+AL+DMY  C  ++    VF+ +  K +  WN+MIT  G + 
Sbjct: 279 IHDYAIKNCIEI-GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             +EAL LF +ME V  + P+A T   V+ ACV
Sbjct: 338 LGQEALNLFSEMERV-NVKPDAITFIGVLCACV 369



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 62/325 (19%)

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F     IH   I+ GL  D+ +   L+ +YS  GRI  +  +F  ++   T +WN +I  
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 462 YTICGQHGDALMLLREM--QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            TI G    ALML + M  Q +  +K                    T   V+  C    +
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADK-------------------FTFPFVIKACTNFLS 140

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM- 578
           +  GK +H   I+   + DV V + L+D Y KCG   FA +VF+ M VRNV++W  +I  
Sbjct: 141 IDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISG 200

Query: 579 ------------------------------AYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
                                          Y  + + +E LEL K M AE      + P
Sbjct: 201 LISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN-----IFP 255

Query: 609 NEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           NE T ++L  AC+  G+++ G  +  Y +K+   IE        ++D+  + G ++DA +
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKN--CIEIGVYLGTALIDMYSKCGSIKDAIE 313

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH 692
           +   MP +      W+S++ +  +H
Sbjct: 314 VFETMPRK--SLPTWNSMITSLGVH 336



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 32/263 (12%)

Query: 488 NNVYDLDETVLRPKPN--SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           ++V+      L P+ N  +   + +L  C     L   ++IHA  IR+ L+ D ++   L
Sbjct: 9   HDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKL 65

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + +Y+  G + +A  +F  +      TWN+II A  ++G  ++ L L KNMV +G     
Sbjct: 66  IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG----- 120

Query: 606 VKPNEVTFIALFAACSHS-----GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
           +  ++ TF  +  AC++      G V  G  + Y    D  ++ +      ++D   + G
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN------LIDFYFKCG 174

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA-AQNLFLLEP--DVASHYV 717
               A ++   M        +W++++        +  G++  A+ +F   P  +V S + 
Sbjct: 175 HTRFALKVFEKM--RVRNVVSWTTVISGL-----ISCGDLQEARRIFDEIPSKNVVS-WT 226

Query: 718 LLSNIYSSAQLWDKAMDVRKKMK 740
            + N Y   Q  ++A+++ K+M+
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQ 249


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 296/854 (34%), Positives = 457/854 (53%), Gaps = 37/854 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q +   +W   +   ARS   +EA   + EM    + P++  + AVL A     ++  
Sbjct: 100 GIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD- 158

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
              I A V   G     V VA  ++N YGKCG D+   + VFD I  +D   WN+MI+ L
Sbjct: 159 --TIRARVEACGSLELDVIVATAVMNAYGKCG-DLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV-GE 214
               + D ALE FR M    V P+  T V+   AC +   RD      ++H  +  + G+
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCH--SRD-FSEALRIHAFARELAGD 272

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +T +  AL+ MY K G+VDDA+ +F+  ++RD+VSWN ++++ + N    +A    R+M
Sbjct: 273 ADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREM 332

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID--NSFVGSALVDMYCNC 332
            L G  P  ++  ++L AC     L  G  +   A+     I+  +  +G+A+++MY  C
Sbjct: 333 LLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRC 392

Query: 333 REVECGRRVFDFISDKK----IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           +  +        +   +    I +WN +++ Y +NE  EEA  +F ++  + G+  +  +
Sbjct: 393 KSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIF-RLMLLGGVTIDTVS 451

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           + +V  AC  S +    + IH    +  L R   VQNAL+ MY+R+G +E ++ IFD M 
Sbjct: 452 LMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMT 511

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            R+ +SW  M+  ++  G + +AL + R +              L E V    PN +T  
Sbjct: 512 TRNVISWTAMVGVHSQLGLNREALRIFRSI--------------LLEGV---APNEVTFT 554

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
            VL  CG L+++   K + A         +V V + L+    KCG L      F +M V+
Sbjct: 555 AVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK 614

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           N ++WN  I A   HG G   +EL + M  EG     +    VT I + ++CSH+G+V++
Sbjct: 615 NQVSWNTAIAANAQHGNGVRGVELFQTMQLEG-----IDTGSVTLIGVLSSCSHAGLVAQ 669

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   F  M  DYG     +HY+CV+DLL RAG +E A + +  +P        W +LL  
Sbjct: 670 GYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCG 729

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C++H ++E G  A Q +  L P     Y+++ N+Y+ A  W +A  VRK M E+G +KEP
Sbjct: 730 CKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEP 789

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE    IH+F  GD SH +S ++H  LE L+E M++ G+V D   V++++  +EKE
Sbjct: 790 GLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKE 849

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
           +LLC HSEKLAIAFG+++T  G  +R+ KNLRVC+DCH ATKFIS +  REI++RD  RF
Sbjct: 850 SLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRF 909

Query: 869 HHFKNGTCSCGDYW 882
           HHF+ G CSC D+W
Sbjct: 910 HHFRGGACSCEDFW 923



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 193/689 (28%), Positives = 312/689 (45%), Gaps = 50/689 (7%)

Query: 46  IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK 105
           I+ +     + Q R   L Y +    D   D   F A++   A + DL+ G++IH  +++
Sbjct: 13  IDPVSFSTSAPQHRTDELKYFD----DGSADASTFAALIHKCARLHDLAQGRRIHGLILR 68

Query: 106 YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
            G  +     A  L+ MY KCGS   +   VF  I +K  V+W S+I    R G    A 
Sbjct: 69  NGIEVGDFLGAR-LLAMYCKCGSPE-EARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAF 126

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMA 225
             FR M    V P+  T V+V  AC +    D +R   +  G+     E +  +  A+M 
Sbjct: 127 HLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVEACGSL----ELDVIVATAVMN 182

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
            Y K G +D A  +F     RD   WN ++S L  +++  EA+   RQM L G+ P+  +
Sbjct: 183 AYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGT 242

Query: 286 IASVLPACSHLEMLDTGKEIHAYA--LRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
             + L AC H         IHA+A  L  D    ++ V +ALV+MY    +V+    +F+
Sbjct: 243 CVAALNACCHSRDFSEALRIHAFARELAGDA---DTVVQTALVNMYGKFGKVDDAEEIFE 299

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I ++ +  WNAM+T    N + ++A   F +M  V  L P+  T  +++ AC  +    
Sbjct: 300 RIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGEL-PSRITYVAILNACFLAAHLK 358

Query: 404 DKEGIHGHAIKLGLG---RDRYVQNALMDMYSRM----GRIEISKTIFDDMEVRDTVSWN 456
             + +   A++ G G    D  +  A+M+MYSR          S  +  D +    + WN
Sbjct: 359 HGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWN 418

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           T+++ Y    Q  +A  + R M              L    +    ++++LMTV   CG+
Sbjct: 419 TVLSLYVENEQFEEAFTIFRLML-------------LGGVTI----DTVSLMTVFNACGS 461

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
            ++L KGK IH+    + L     V +ALV MYA+ G L  AR +FD M  RNVI+W  +
Sbjct: 462 SASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAM 521

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           +  +   G  +E L + ++++ EG     V PNEVTF A+  AC +   +     L    
Sbjct: 522 VGVHSQLGLNREALRIFRSILLEG-----VAPNEVTFTAVLNACGNLASIPAA-KLVQAC 575

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             + G   + +    ++  LG+ G +E+      +M  +     +W++ + A   H N  
Sbjct: 576 LSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK--NQVSWNTAIAANAQHGNGV 633

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
            G    Q + L   D  S  V L  + SS
Sbjct: 634 RGVELFQTMQLEGIDTGS--VTLIGVLSS 660


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/614 (42%), Positives = 378/614 (61%), Gaps = 25/614 (4%)

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           +F+  + +  + PD  ++A  L +CS +  LD G+ I AYA++  ++ D  FV S+L+ M
Sbjct: 105 LFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADR-FVLSSLIHM 163

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y +CR+V   + +FD + +  + +WNA+IT Y +N    E + +F  M EV G+  +  T
Sbjct: 164 YASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEV-GVAFDEIT 222

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           + SVV AC R       + +  +  + GL R+R +  AL+DMY++ G +  ++ +FD M+
Sbjct: 223 LVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQ 282

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            RD V+W+ MI+GYT   Q  +AL L  EMQ  E E                 PN +T++
Sbjct: 283 SRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE-----------------PNDVTMV 325

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +VL  C  L AL  GK +H+Y  R  L+  +++G+ALVD YAKCGC++ A   F+ MPV+
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           N  TW  +I     +G G+E LEL  +M     R   ++P +VTFI +  ACSHS +V E
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSM-----RKASIEPTDVTFIGVLMACSHSCLVEE 440

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   F  M  DYGI+P  +HY CVVDLLGRAG +++AYQ I  MP E   A  W +LL +
Sbjct: 441 GRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE-PNAVIWRALLSS 499

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C +H+NVEIGE A + +  L P  +  Y+LLSNIY+S   W  A  +RK+MK+ G+ K P
Sbjct: 500 CAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTP 559

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           GCS IE    + +F A D  H Q ++++  +E + +R++  GY+P+T+ V   V+E EKE
Sbjct: 560 GCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKE 619

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             +  HSEKLAIAFG++   PG TIR++KNLRVC DCH ATK ISK+ +REI++RD  RF
Sbjct: 620 VSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRF 679

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+GTCSC DYW
Sbjct: 680 HHFKDGTCSCNDYW 693



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 229/505 (45%), Gaps = 49/505 (9%)

Query: 33  PLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQ 91
           P P   T C    + +L     +    +A+  ++EM   + + PD       LK+ + + 
Sbjct: 77  PRPPLSTPCYNVLMRAL---LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMC 133

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            L +G+ I A+ VK G  ++   V ++L++MY  C  D+     +FD + E   V WN++
Sbjct: 134 TLDVGRGIQAYAVKRGL-MADRFVLSSLIHMYASC-RDVAAAQLLFDAVEENGVVMWNAI 191

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I    + G W   +E F+ ML   V     TLVSV  AC    R    +LG+ V      
Sbjct: 192 ITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACG---RIGDAKLGKWVAEYVDE 248

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   N  +M AL+ MYAK G +  A+ LF   + RD+V+W+ ++S  +Q D+  EA+  
Sbjct: 249 KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M L  ++P+ V++ SVL AC+ L  L+TGK +H+Y +R   L     +G+ALVD Y 
Sbjct: 309 FSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSY-IRRKRLSLTIILGTALVDFYA 367

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  ++     F+ +  K    W A+I G   N    EAL LF  M + A + P   T  
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRK-ASIEPTDVTFI 426

Query: 391 SVVPACVRS----------EAFPDKEGIHGHAIKLGLGRDRYVQNALMD---MYSRMGRI 437
            V+ AC  S          ++     GI   A   G   D   +  L+D    + R   I
Sbjct: 427 GVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPI 486

Query: 438 EISKTIFDDM---------------EVRDTVSWNTMITG--------YTICGQHGDALML 474
           E +  I+  +                ++  VS N   +G        Y   GQ  +A M+
Sbjct: 487 EPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMI 546

Query: 475 LREMQNMEEEKNRN-NVYDLDETVL 498
            +EM++   EK    ++ +LD  V+
Sbjct: 547 RKEMKDRGIEKTPGCSLIELDGVVV 571



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 25/334 (7%)

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           +N ++       + E+AL LF++M +VA + P+  T++  + +C R        GI  +A
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           +K GL  DR+V ++L+ MY+    +  ++ +FD +E    V WN +IT Y    ++G+ +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYM---KNGNWM 202

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            ++   + M E          DE         ITL++V+  CG +     GK +  Y   
Sbjct: 203 EVVEMFKGMLEVG-----VAFDE---------ITLVSVVTACGRIGDAKLGKWVAEYVDE 248

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             L  +  + +AL+DMYAKCG L  ARR+FD M  R+V+ W+ +I  Y    + +E L L
Sbjct: 249 KGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M     +  EV+PN+VT +++ +AC+  G +  G  +   ++    +  +      +
Sbjct: 309 FSEM-----QLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKR-LSLTIILGTAL 362

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           VD   + G ++DA +    MP     +  W++L+
Sbjct: 363 VDFYAKCGCIDDAVEAFESMP--VKNSWTWTALI 394


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 311/911 (34%), Positives = 475/911 (52%), Gaps = 97/911 (10%)

Query: 45  WIESLRSEARSNQFREAI-LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W  +LRS  R  Q+ E + L ++ +  +   PDNF  P  LKA AG++ L LGK IH   
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K     S + V + LV +Y KCG  M +  KVF+     D V W SM+    +    + 
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCG-QMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMNA 222
           AL  F  M+  +       LV+  L   NL  + G     ++  N   ++ E +    + 
Sbjct: 189 ALALFSQMVMMDCFDGDLPLVNSLL---NLYAKTGCE---KIAANLFSKMPEKDVISWST 242

Query: 223 LMAMYAKLGRVDDAKTLF-----KSFED------------------------------RD 247
           ++A YA     ++A  LF     K FE                               +D
Sbjct: 243 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKD 302

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSW  ++S  +QN    +++   R M   GI+PD V++  +L A S L +      +H 
Sbjct: 303 VVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHG 362

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           Y +R+     N FVG++L+++Y  C  +    ++F  +  + + +W++MI  YG +    
Sbjct: 363 YVVRSG-FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGG 421

Query: 368 EALMLFIKMEEV-----------------AGLWPNATTMSSVVPACVRS----------- 399
           EAL +F +M +V                   L   + T+++ +P  V++           
Sbjct: 422 EALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLG 481

Query: 400 ---EAFPD-----KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
              E FP       +    +    GL  D  +      MY    RI+ +  +F+D+    
Sbjct: 482 HFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPC 541

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
           +  WN MI G+   G+   +L L  +M     + + + V           PN +++++VL
Sbjct: 542 SFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVI----------PNRVSILSVL 591

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             CG L AL KG+  H+Y I+     D++V +A++DMY+KCG L+ AR +FD    ++++
Sbjct: 592 LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV 651

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            W+ +I +YG+HG G++ ++L   MV  G     V+P+ VTF  + +ACSHSG++ EG  
Sbjct: 652 CWSAMIASYGIHGHGRKAIDLFDQMVKAG-----VRPSHVTFTCVLSACSHSGLLEEGKM 706

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M +++ I     +YAC+VDLLGRAG++ +A  LI  MP E D A  W SLLGACRI
Sbjct: 707 YFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPD-ASIWGSLLGACRI 765

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H N+++ E  A +LF L+P  A ++VLLSNIY++   W++   VRK M   G  K  G S
Sbjct: 766 HNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFS 825

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            +E+ +++HKF  GD SH Q E+L+  LE L+  M+  GYVP T  VLH++ EE KE  L
Sbjct: 826 LVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAAL 885

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LAIAFG++NT PGTT+R+ KNLR+C DCH A K ISKI +R I++RD+ RFH F
Sbjct: 886 SYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRF 945

Query: 872 KNGTCSCGDYW 882
           ++G CSCGDYW
Sbjct: 946 EDGVCSCGDYW 956



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 210/467 (44%), Gaps = 92/467 (19%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLF 240
            LV +  AC+N       R   Q+H    + G   +TF    L ++YAK   +  A+ +F
Sbjct: 6   VLVDLFQACNNG------RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                 ++  WN+ + S  +  ++ E + +F   +   G  PD  +I   L AC+ L ML
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + GK IH +A +ND +  + FVGSALV++Y  C ++    +VF+        LW +M+TG
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y QN   EEAL LF +M               V+  C                       
Sbjct: 180 YQQNNDPEEALALFSQM---------------VMMDCFDG-------------------- 204

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM- 478
           D  + N+L+++Y++ G  +I+  +F  M  +D +SW+TMI  Y       +AL L  EM 
Sbjct: 205 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 264

Query: 479 ---------------------QNMEEEKN---------------------RNNVYDLDET 496
                                +N+EE K                      +N +      
Sbjct: 265 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMG 324

Query: 497 VLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           V R       +P+++ ++ +L     L    +   +H Y +R+   ++V VG++L+++Y+
Sbjct: 325 VFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYS 384

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           KCG L  A ++F  M VR+V+ W+ +I AYG+HG G E LE+   M+
Sbjct: 385 KCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMI 431



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 211/463 (45%), Gaps = 54/463 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ---IH 100
           SW+  L   A++    +++  +  M    IQPD  A   V+K +A   +L + +Q   +H
Sbjct: 305 SWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVA---VVKILAASSELGIFQQALCLH 361

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +VV+ G+  S+V V  +L+ +Y KCGS + D  K+F  +  +D V W+SMIA     G+
Sbjct: 362 GYVVRSGFN-SNVFVGASLIELYSKCGS-LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 419

Query: 161 WDLALEAFRMM--------------LYSNVEP----SSFTLVS-VALACSNLSRRDGLR- 200
              ALE F  M              +   V+P    +S TL + +         R   R 
Sbjct: 420 GGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRW 479

Query: 201 LGR--------------QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           LG                   N    G ++++ I+     MY    R+D A  +F+   +
Sbjct: 480 LGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPN 539

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG-------VSIASVLPACSHLEM 298
                WN ++   + + +FL ++    +M  +G+KPD        VSI SVL AC +L  
Sbjct: 540 PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGA 599

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  G+  H+Y ++     D   V +A++DMY  C  ++  R +FD  + K +  W+AMI 
Sbjct: 600 LRKGEWFHSYVIQTGFEFD-ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 658

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGL 417
            YG + +  +A+ LF +M + AG+ P+  T + V+ AC  S    + K        +  +
Sbjct: 659 SYGIHGHGRKAIDLFDQMVK-AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 717

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
            R       ++D+  R G++  +  + ++M V  D   W +++
Sbjct: 718 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 58/327 (17%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H+   +  IL D +F  + L  +Y  C  ++  R+VFD      + LWN+ +  Y + 
Sbjct: 22  QLHSQVFKTGILHD-TFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCRE 80

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRY 422
           +  EE L LF  M   AG  P+  T+   + AC         + IHG A K   +G D +
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+++YS+ G++  +  +F++ +  DTV W +M+TGY       +AL L  +M  M+
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                   +D D     P  NS                                      
Sbjct: 201 -------CFDGD----LPLVNS-------------------------------------- 211

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
             L+++YAK GC   A  +F  MP ++VI+W+ +I  Y  +    E L L   M+ +   
Sbjct: 212 --LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK--- 266

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEG 629
               +PN VT ++   AC+ S  + EG
Sbjct: 267 --RFEPNSVTVVSALQACAVSRNLEEG 291



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 46/285 (16%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDN-------FAFP 81
           A S+        C   W   +R  A   +F  ++  Y +M    ++PDN        +  
Sbjct: 529 AASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSIL 588

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRI 140
           +VL A   +  L  G+  H++V++ G+    + VA  +++MY KCGS   D+ + +FD  
Sbjct: 589 SVLLACGNLGALRKGEWFHSYVIQTGFEFD-ILVATAIMDMYSKCGS--LDLARCLFDET 645

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
             KD V W++MIA+    G    A++ F  M+ + V PS  T   V  ACS         
Sbjct: 646 AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS--------- 696

Query: 201 LGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
                H   L  G+           MY +L   +           R L ++  +V  L +
Sbjct: 697 -----HSGLLEEGK-----------MYFQLMTEEFVIA-------RKLSNYACMVDLLGR 733

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
             +  EAV  +  M    ++PD     S+L AC     LD  ++I
Sbjct: 734 AGQLSEAVDLIENMP---VEPDASIWGSLLGACRIHNNLDLAEKI 775


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 292/821 (35%), Positives = 462/821 (56%), Gaps = 37/821 (4%)

Query: 63  LSYIE-MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +SY++ M    I  ++ A+ A+++     +    G +++++V        S+ + N L++
Sbjct: 91  MSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYV-SISMSHLSLQLGNALLS 149

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           M+ + G ++ D + VF R+ +++  SWN ++    + G +D AL+ +  ML+  V+P  +
Sbjct: 150 MFVRFG-NLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVY 208

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T   V   C  +     L  GR++H + +R G E +  ++NAL+ MY K G V+ A+ +F
Sbjct: 209 TFPCVLRTCGGMP---NLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
               +RD +SWN ++S   +N   LE +     M    + PD +++ SV+ AC  L    
Sbjct: 266 DKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDR 325

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G++IH Y LR +   D S + ++L+ MY +   +E    VF     + +  W AMI+GY
Sbjct: 326 LGRQIHGYVLRTEFGRDPS-IHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
                 ++AL  + KM E  G+ P+  T++ V+ AC           +H  A + GL   
Sbjct: 385 ENCLMPQKALETY-KMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSY 443

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
             V N+L+DMY++   I+ +  IF     ++ VSW ++I G  I  +  +AL   REM  
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-- 501

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                           + R KPNS+TL+ VL  C  + AL  GKEIHA+A+R  ++ D  
Sbjct: 502 ----------------IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGF 545

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           + +A++DMY +CG + +A + F  +    V +WN+++  Y   G+G    EL + MV   
Sbjct: 546 MPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESN 604

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                V PNEVTFI++  ACS SGMV+EG++ F  MK  Y I P+  HYACVVDLLGR+G
Sbjct: 605 -----VSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSG 659

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           K+E+AY+ I  MP + D A  W +LL +CRIH +VE+GE+AA+N+F  +     +Y+LLS
Sbjct: 660 KLEEAYEFIQKMPMKPDPA-VWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLS 718

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N+Y+    WDK  +VRK M++ G+  +PGCSW+E    +H FL+ D  H Q ++++  LE
Sbjct: 719 NLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLE 778

Query: 781 NLSERMRKEGYV-PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
              ++M++ G   P++S +  ++ E  K  + CGHSE+LAI FG++N+ PG  I V KNL
Sbjct: 779 RFYKKMKEAGVEGPESSHM--DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNL 836

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            +C  CH   KFIS+   REI +RD  +FHHFK G CSC D
Sbjct: 837 YMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/544 (32%), Positives = 281/544 (51%), Gaps = 31/544 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F EA+  Y  M    ++PD + FP VL+   G+ +L  G++IH HV
Sbjct: 174 SWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHV 233

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++YG+  S V V N L+ MY KCG D+     VFD++  +D++SWN+MI+     G    
Sbjct: 234 IRYGFE-SDVDVVNALITMYVKCG-DVNTARLVFDKMPNRDRISWNAMISGYFENGVCLE 291

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMN 221
            L  F MM+   V+P   T+ SV  AC  L      RLGRQ+HG  LR  E+  +  I N
Sbjct: 292 GLRLFGMMIKYPVDPDLMTMTSVITACELLGDD---RLGRQIHGYVLRT-EFGRDPSIHN 347

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY+ +G +++A+T+F   E RDLVSW  ++S         +A+   + M   GI P
Sbjct: 348 SLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMP 407

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D ++IA VL ACS L  LD G  +H  A +   L+  S V ++L+DMY  C+ ++    +
Sbjct: 408 DEITIAIVLSACSCLCNLDMGMNLHEVA-KQKGLVSYSIVANSLIDMYAKCKCIDKALEI 466

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F    +K I  W ++I G   N    EAL  F +M  +  L PN+ T+  V+ AC R  A
Sbjct: 467 FHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM--IRRLKPNSVTLVCVLSACARIGA 524

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH HA++ G+  D ++ NA++DMY R GR+E +   F  ++  +  SWN ++TG
Sbjct: 525 LTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTG 583

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G+   A  L + M         +NV           PN +T +++L  C     +A
Sbjct: 584 YAERGKGAHATELFQRMV-------ESNV----------SPNEVTFISILCACSRSGMVA 626

Query: 522 KGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G E  ++   +  +  ++   + +VD+  + G L  A      MP++ +   W  ++ +
Sbjct: 627 EGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNS 686

Query: 580 YGMH 583
             +H
Sbjct: 687 CRIH 690


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/742 (37%), Positives = 429/742 (57%), Gaps = 29/742 (3%)

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +++ VS+ ++I    +  + D  ++ F  +     E + F   ++      L   +   L
Sbjct: 3   DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTIL---KLLVSVECAEL 59

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
              +H    ++G E N F+  AL+  YA  G V+ A+  F +   +D+VSW  +V+  ++
Sbjct: 60  AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           ND+F +++    +M + G  P+  + A VL AC  LE    GK +H   L+    +D  +
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD-LY 178

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VG  L+D+Y    +     RVF+ +    +  W+ MI+ Y Q+    EA+ LF +M   A
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR-A 237

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PN  T +SV+ +C   E     + +H H +K+GL  + +V NALMD+Y++ GR++ S
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             +F ++  R+ V+WNTMI GY    Q GD    L   +NM E               + 
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYV---QSGDGDKALSLYKNMLE--------------CQV 340

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           + + +T  +VL  C +L+A+  G +IH+ +++ +   DVVVG+AL+DMYAKCG +  AR 
Sbjct: 341 QASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARL 400

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VFD++  R+ I+WN +I  Y MHG   E L+  + M     +  E  PN++TF+++ +AC
Sbjct: 401 VFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMM-----QETECVPNKLTFVSILSAC 455

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           S++G++  G + F  M  DYGIEP  +HY C+V LLGR+G ++ A +LI  +P E     
Sbjct: 456 SNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLE-PNVK 514

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W +LLGAC IH +V++G ++AQ +  ++P   + +VLLSNIY+  + W+    VRK MK
Sbjct: 515 VWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMK 574

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
             GV+KEPG SWIE    +H F  GD SH   + + G LE L+ +  K GYVPD + VL 
Sbjct: 575 NKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLR 634

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V ++EK+  L  HSE+LA+AFG++ TP    IR+ KNLR+C DCH A K ISKI  R+I
Sbjct: 635 DVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDI 694

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           I+RD+ RFHHF++G CSCGDYW
Sbjct: 695 IIRDMNRFHHFQDGICSCGDYW 716



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 273/563 (48%), Gaps = 42/563 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++  ++   +S Q  E +  +  + R   + + F F  +LK +  ++   L   +HA +
Sbjct: 8   SFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACI 67

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  S+  V   L++ Y  CGS +    + FD I  KD VSW  M+A      ++  
Sbjct: 68  YKLGHE-SNAFVGTALIDAYAVCGS-VNSARQAFDAIACKDMVSWTGMVACYAENDRFQD 125

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +L+ F  M      P+ FT   V  AC  L   +   +G+ VHG  L+   E + ++   
Sbjct: 126 SLQLFAEMRMVGFNPNHFTFAGVLKACIGL---EAFSVGKSVHGCVLKTCYEMDLYVGVG 182

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G  +D   +F+     D++ W+ ++S  +Q+++  EAV    QM    + P+
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + ASVL +C+ +E L  GK++H + L+   L  N FV +AL+D+Y  C  ++   ++F
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKVG-LDGNVFVSNALMDVYAKCGRLDNSMKLF 301

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             + ++    WN MI GY Q+   ++AL L+  M E   +  +  T SSV+ AC    A 
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ-VQASEVTYSSVLRACASLAAM 360

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH  ++K    +D  V NAL+DMY++ G I+ ++ +FD +  RD +SWN MI+GY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           ++ G  G+AL   + MQ  E                   PN +T +++L  C     L  
Sbjct: 421 SMHGLVGEALKAFQMMQETE-----------------CVPNKLTFVSILSACSNAGLLDI 463

Query: 523 GKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           G+      +  Y I   +       + +V +  + G L+ A ++ + +P+  NV  W  +
Sbjct: 464 GQNYFKSMVQDYGIEPCMEH----YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRAL 519

Query: 577 IMAYGMHGE-------GQEVLEL 592
           + A  +H +        Q++L++
Sbjct: 520 LGACVIHNDVDLGIMSAQQILQI 542



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 206/359 (57%), Gaps = 10/359 (2%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK+  SW   +   A +++F++++  + EM      P++F F  VLKA  G++  S+GK 
Sbjct: 104 CKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKS 163

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  V+K  Y +  + V   L+++Y K G D  DV +VF+ + + D + W+ MI+   + 
Sbjct: 164 VHGCVLKTCYEM-DLYVGVGLLDLYTKFG-DANDVLRVFEEMPKHDVIPWSFMISRYAQS 221

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            +   A+E F  M  + V P+ FT  SV  +C+++   + L+LG+QVH + L+VG + N 
Sbjct: 222 NQSREAVELFGQMRRAFVLPNQFTFASVLQSCASI---ENLQLGKQVHCHVLKVGLDGNV 278

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NALM +YAK GR+D++  LF    +R+ V+WNT++    Q+    +A+   + M   
Sbjct: 279 FVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLEC 338

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            ++   V+ +SVL AC+ L  ++ G +IH+ +L+  I   +  VG+AL+DMY  C  ++ 
Sbjct: 339 QVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT-IYDKDVVVGNALIDMYAKCGSIKN 397

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            R VFD +S++    WNAMI+GY  +    EAL  F  M+E   + PN  T  S++ AC
Sbjct: 398 ARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV-PNKLTFVSILSAC 455



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 39/235 (16%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KPNS 504
           M  R+TVS+ T+I GY                    +    + V DL   V R   + N 
Sbjct: 1   MPDRNTVSFVTLIQGYV-------------------QSFQLDEVVDLFSRVHREGHELNP 41

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
               T+L    ++        +HA   +    ++  VG+AL+D YA CG +N AR+ FD 
Sbjct: 42  FVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDA 101

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  +++++W  ++  Y  +   Q+ L+L   M   G       PN  TF  +  AC    
Sbjct: 102 IACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVG-----FNPNHFTFAGVLKACI--- 153

Query: 625 MVSEGMDLFYKMKDDYGIEPSP----DHYACV--VDLLGRAGKVEDAYQLINMMP 673
               G++ F   K  +G         D Y  V  +DL  + G   D  ++   MP
Sbjct: 154 ----GLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 292/816 (35%), Positives = 459/816 (56%), Gaps = 46/816 (5%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D+ ++  +L+     +D + GK +H H++K+G  L  +   N L+N Y   G  + D  K
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLD-LFAQNILLNTYVHFGF-LEDASK 59

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT-------LVSVAL 188
           +FD +   + VS+ ++     R  ++  A      +     E + F        LVS+ L
Sbjct: 60  LFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDL 119

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           A + LS          VH    ++G + + F+  AL+  Y+  G VD A+ +F     +D
Sbjct: 120 ADTCLS----------VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKD 169

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSW  +V+  ++N    ++++   QM + G +P+  +I++ L +C+ LE    GK +H 
Sbjct: 170 MVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHG 229

Query: 308 YALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            AL+  +  D   +VG AL+++Y    E+   ++ F+ +    +  W+ MI+ Y Q++  
Sbjct: 230 CALK--VCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKS 287

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           +EAL LF +M + + + PN  T +SV+ AC           IH   +K+GL  + +V NA
Sbjct: 288 KEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNA 347

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           LMD+Y++ G IE S  +F     ++ V+WNT+I GY   G    AL L   M  ++    
Sbjct: 348 LMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD---- 403

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                         +P  +T  +VL    +L AL  G++IH+  I+ M   D VV ++L+
Sbjct: 404 -------------IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLI 450

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMYAKCG ++ AR  FD M  ++ ++WN +I  Y +HG G E L L   M    S     
Sbjct: 451 DMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNS----- 505

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           KPN++TF+ + +ACS++G++ +G   F  M  DYGIEP  +HY C+V LLGR+G+ ++A 
Sbjct: 506 KPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAV 565

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
           +LI  +P +      W +LLGAC IH+N+++G++ AQ +  +EP   + +VLLSN+Y++A
Sbjct: 566 KLIGEIPFQ-PSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATA 624

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           + WD    VRK MK+  V+KEPG SW+E    +H F  GD SH   + +   LE L ++ 
Sbjct: 625 KRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKT 684

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           R  GYVPD S VL +V ++EKE LL  HSE+LA+AFG++  P G +IR+ KNLR+C DCH
Sbjct: 685 RDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCH 744

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              K +SKI  REI++RD+ RFHHF+ G CSCGDYW
Sbjct: 745 AVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 172/588 (29%), Positives = 281/588 (47%), Gaps = 53/588 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++   +  +RS+QF+ A    + + R   + + F F  +LK +  +        +HA+V
Sbjct: 71  SFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYV 130

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  +   V   L++ Y  CG ++    +VFD I  KD VSW  M+A        + 
Sbjct: 131 YKLGHQ-ADAFVGTALIDAYSVCG-NVDAARQVFDGIYFKDMVSWTGMVACYAENYCHED 188

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +L  F  M      P++FT+ +   +C+ L   +  ++G+ VHG +L+V  + + ++  A
Sbjct: 189 SLLLFCQMRIMGYRPNNFTISAALKSCNGL---EAFKVGKSVHGCALKVCYDRDLYVGIA 245

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
           L+ +Y K G + +A+  F+     DL+ W+ ++S  +Q+DK  EA+ +F R      + P
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVP 305

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + ASVL AC+ L +L+ G +IH+  L+   L  N FV +AL+D+Y  C E+E   ++
Sbjct: 306 NNFTFASVLQACASLVLLNLGNQIHSCVLKVG-LDSNVFVSNALMDVYAKCGEIENSVKL 364

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F   ++K    WN +I GY Q    E+AL LF  M  +  + P   T SSV+ A     A
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGL-DIQPTEVTYSSVLRASASLVA 423

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IH   IK    +D  V N+L+DMY++ GRI+ ++  FD M+ +D VSWN +I G
Sbjct: 424 LEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICG 483

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y+I G   +AL L   MQ                     KPN +T + VL  C     L 
Sbjct: 484 YSIHGLGMEALNLFDMMQQSNS-----------------KPNKLTFVGVLSACSNAGLLD 526

Query: 522 KGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
           KG+      +  Y I   +       + +V +  + G  + A ++   +P + +V+ W  
Sbjct: 527 KGRAHFKSMLQDYGIEPCIEH----YTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRA 582

Query: 576 IIMAYGMHGE-------GQEVLE----------LLKNMVAEGSRGGEV 606
           ++ A  +H          Q VLE          LL NM A   R   V
Sbjct: 583 LLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNV 630



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
             GS  + + +W   +    +     +A+  +  M   DIQP    + +VL+A A +  L
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVAL 424

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G+QIH+  +K  Y   SV VAN+L++MY KCG  + D    FD++ ++D+VSWN++I 
Sbjct: 425 EPGRQIHSLTIKTMYNKDSV-VANSLIDMYAKCGR-IDDARLTFDKMDKQDEVSWNALIC 482

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
                G    AL  F MM  SN +P+  T V V  ACSN    D  R
Sbjct: 483 GYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/836 (35%), Positives = 455/836 (54%), Gaps = 43/836 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R+N  REA+  + ++  S +  D       LK    + D  +G+Q+H   +K G+ L  
Sbjct: 80  SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF-LED 138

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+V  +LV+MY K   D  D   +FD +  K+ VSW S+++   R G  D  +     M 
Sbjct: 139 VSVGTSLVDMYMKT-EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              V P+ FT  +V  A ++ S  +G   G QVH   ++ G E+ TF+ NAL+ MY K  
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEG---GVQVHAMIVKNGFEFTTFVCNALICMYLKSE 254

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V DA+ +F S   RD V+WN ++   +    +LE      +M L G+K       + L 
Sbjct: 255 MVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALK 314

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI-SDKKI 350
            CS    L+  K++H   ++N        + +AL+  Y  C  V+   ++F    +   +
Sbjct: 315 LCSQQRELNFTKQLHCGVVKNGYEFAQD-IRTALMVTYSKCSSVDEAFKLFSMADAAHNV 373

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV---PACVRSEAFPDKEG 407
             W AMI G+ QN  +E+A+ LF +M    G+ PN  T S+V+   P+ + S+       
Sbjct: 374 VTWTAMIGGFVQNNNNEKAVDLFCQMSR-EGVRPNHFTYSTVLAGKPSSLLSQ------- 425

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   IK    +   V  AL+D Y + G +  S  +F  +  +D V+W+ M+TG      
Sbjct: 426 LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA---- 481

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK-GKEI 526
                      Q  + EK       L +  +  KPN  T  +V+  C + +A  + GK+I
Sbjct: 482 -----------QTRDSEKAMEVFIQLVKEGV--KPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           HA A+++  +  + V SAL+ MY+K G +  A +VF     R++++WN +I  YG HG+ 
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           ++ LE+ + M  +G     +  ++VTFI +  AC+H+G+V EG   F  M  DY I+   
Sbjct: 589 KKALEVFQIMQNQG-----LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKI 643

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY+C+VDL  RAG  + A  +IN MP        W +LL ACR+H+N+E+G++AA+ L 
Sbjct: 644 EHYSCMVDLYSRAGMFDKAMDIINGMPFPASPT-IWRTLLAACRVHRNLELGKLAAEKLV 702

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            L+P+ A  YVLLSNI++ A  W++   VRK M E  V+KE GCSWIE  + I  FLAGD
Sbjct: 703 SLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH  S+ ++  LE LS +++  GY PDT+ V H+V EE KE +L  HSE+LAIA+G++ 
Sbjct: 763 VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PPG  I++ KNLR+C DCH   + IS IE R +I+RD  RFHHFK G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 173/549 (31%), Positives = 263/549 (47%), Gaps = 41/549 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   AR+    E I    +M    + P+ F F  VL A+A    +  G Q+HA +
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDM-WDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G+  ++  V N L+ MY K  S+M  D   VFD +  +D V+WN MI      G + 
Sbjct: 232 VKNGFEFTTF-VCNALICMYLK--SEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYL 288

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
              + F  M  + V+ S     +    C   S++  L   +Q+H   ++ G E+   I  
Sbjct: 289 EGFQMFHRMRLAGVKLSRTVFCTALKLC---SQQRELNFTKQLHCGVVKNGYEFAQDIRT 345

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           ALM  Y+K   VD+A  LF S  D   ++V+W  ++    QN+   +AV    QM+  G+
Sbjct: 346 ALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGV 404

Query: 280 KPDGVSIASVLPA--CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           +P+  + ++VL     S L  L   + I AY  +         V +AL+D Y     V  
Sbjct: 405 RPNHFTYSTVLAGKPSSLLSQLH-AQIIKAYYEK------VPSVATALLDAYVKTGNVVE 457

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             RVF  I  K I  W+AM+TG  Q    E+A+ +FI++ +  G+ PN  T SSV+ AC 
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACS 516

Query: 398 RSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            S A  +  + IH  A+K G      V +AL+ MYS+ G IE ++ +F   E RD VSWN
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MITGY   GQHGDA   L   Q M+     N    LD+         +T + VL  C  
Sbjct: 577 SMITGY---GQHGDAKKALEVFQIMQ-----NQGLPLDD---------VTFIGVLTACTH 619

Query: 517 LSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WN 574
              + +G++     I++  +   +   S +VD+Y++ G  + A  + + MP     T W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 575 VIIMAYGMH 583
            ++ A  +H
Sbjct: 680 TLLAACRVH 688



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 213/452 (47%), Gaps = 32/452 (7%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  LF     +D+  +N ++   S+N+   EA+   + +   G+  DG++++  L  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L     G+++H  +L++  L D S VG++LVDMY    + E GR +FD +  K +  W +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVS-VGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +++GY +N  ++E + L  +M ++ G+ PN  T ++V+ A            +H   +K 
Sbjct: 176 LLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G     +V NAL+ MY +   +  ++ +FD M VRD+V+WN MI GY   G + +   + 
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M+                 +   K +     T L  C     L   K++H   ++N  
Sbjct: 295 HRMR-----------------LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY 337

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                + +AL+  Y+KC  ++ A ++F +     NV+TW  +I  +  +   ++ ++L  
Sbjct: 338 EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFC 397

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  EG     V+PN  T+  + A    S ++S+   L  ++   Y  E  P     ++D
Sbjct: 398 QMSREG-----VRPNHFTYSTVLAG-KPSSLLSQ---LHAQIIKAY-YEKVPSVATALLD 447

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
              + G V ++ ++   +P +     AWS++L
Sbjct: 448 AYVKTGNVVESARVFYSIPAK--DIVAWSAML 477


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 298/801 (37%), Positives = 446/801 (55%), Gaps = 43/801 (5%)

Query: 92  DLSLGKQIHAHVVKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSW 148
           D+ LG+ +  H+++ G  L +   VAN+L+ +Y KC S +     VFD   +  +D VSW
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKC-SAVAAARSVFDGMPVGLRDLVSW 120

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
            +M + L R G    AL  F   L   + P++FTL +   AC   +       G  V G 
Sbjct: 121 TAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC--FASELFHLAGGAVLGL 178

Query: 209 SLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             ++G W T   +  AL+ M+AK G +   + +F    +R +V W  +++  +Q+    E
Sbjct: 179 VFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDE 238

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           AV     M   G +PD  +++S+L AC+ L     G+++H+ ALR  +  D S V   LV
Sbjct: 239 AVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESD-SCVSCGLV 297

Query: 327 DMYC---NCREVECGRRVFDFISDKKIALWNAMITGYGQ-NEYDEEALMLFIKMEEVAGL 382
           DMY    N + +   R VF+ +    +  W A+++GY Q    D + ++LF KM    G+
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLN-EGI 356

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T SS++ AC           IH H +K  L     V NAL+ MY+  G IE ++ 
Sbjct: 357 RPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARH 416

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
            FD +  ++ VS++                       N++ +   N   D     +    
Sbjct: 417 AFDQLYEKNMVSFSG----------------------NLDGDGRSNTYQDYQIERMELGI 454

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           ++ T  +++    ++  L KG+ +HA +++    +D  +G++LV MY++CG L  A +VF
Sbjct: 455 STFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVF 514

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D M   NVI+W  +I     HG     LEL  +M+A G     VKPN+VT+IA+ +ACSH
Sbjct: 515 DEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAG-----VKPNDVTYIAVLSACSH 569

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           +G+V EG + F  M+  +G+ P  +HYAC+VDLLGR+G VEDA   IN MP + D A  W
Sbjct: 570 AGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVD-ALVW 628

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            +LLGAC+ H N++IGEIAA ++  LEP   + YVLLSN+Y+ A LWD+   +R  M++ 
Sbjct: 629 KTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDK 688

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
            + KE G SW+   + IH+F AGD SH Q+E+++  LE L   ++  GYVPDTS VLH++
Sbjct: 689 NLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDM 748

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTT-IRVAKNLRVCNDCHQATKFISKIESREII 861
           ++E KE  L  HSEK+A+AFG+++    T  IR+ KNLRVC DCH A K++SK   REII
Sbjct: 749 SDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREII 808

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           LRD  RFH  K+G CSCG+YW
Sbjct: 809 LRDSNRFHRMKDGECSCGEYW 829



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 218/428 (50%), Gaps = 31/428 (7%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+S    EA+  +++M  +  QPD +   ++L A   +    LG+Q+H+  +
Sbjct: 223 WTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLAL 282

Query: 105 KYGYGLSSVTVANTLVNMYGKC--GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + G   S   V+  LV+MY K   G  + +  +VF+R+ + + ++W ++++   + G  D
Sbjct: 283 RLGLE-SDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQD 341

Query: 163 -LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFI 219
              +  F  ML   + P+  T  S+  AC+NL  +D    GRQ+H + ++  + + N  +
Sbjct: 342 NQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDS---GRQIHTHCVKSNLADLNV-V 397

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NAL++MYA+ G +++A+  F    ++++VS++  +    +++ + +    + +M L GI
Sbjct: 398 GNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQ--IERMEL-GI 454

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
                +  S++ A + + ML  G+ +HA +L+     D + +G++LV MY  C  +    
Sbjct: 455 ST--FTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRA-IGNSLVSMYSRCGYLVDAC 511

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VFD ++D  +  W +MI+G  ++ Y   AL LF  M   AG+ PN  T  +V+ AC  +
Sbjct: 512 QVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDM-IAAGVKPNDVTYIAVLSACSHA 570

Query: 400 -------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-D 451
                  E F   +  HG   ++    + Y    ++D+  R G +E +    ++M  + D
Sbjct: 571 GLVKEGKEHFRMMQKHHGLIPRM----EHYA--CMVDLLGRSGLVEDALDFINEMPCQVD 624

Query: 452 TVSWNTMI 459
            + W T++
Sbjct: 625 ALVWKTLL 632


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/850 (35%), Positives = 463/850 (54%), Gaps = 53/850 (6%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ-DLSLGKQIHAH 102
            SW   + +   + +  +A+  +  +    ++P++     +L A+A    D    +  H  
Sbjct: 301  SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGR 360

Query: 103  VVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEK-DQVSWNSMIATLCRFG 159
            + + GY L  V + N +++MY KCG  S  W    VF RI  K D +SWN+M+       
Sbjct: 361  IWESGY-LRDVVIGNAIISMYAKCGFFSAAW---AVFRRIRWKCDVISWNTMLGASEDRK 416

Query: 160  KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNT 217
             +   +  F  ML + ++P+  + +++  ACSN    + L  GR++H   L  R     +
Sbjct: 417  SFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN---SEALDFGRKIHSLILTRRRDYVES 473

Query: 218  FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             +   L++MY K G + +A+ +FK      R LV+WN ++ + +QND+  EA   L +M 
Sbjct: 474  SVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 276  LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL---IDNSFVGSALVDMYCNC 332
              G+ PD +S  SVL +C   +         A  LR  IL     ++ + +AL+ M+  C
Sbjct: 534  QGGVLPDALSFTSVLSSCYCSQ--------EAQVLRMCILESGYRSACLETALISMHGRC 585

Query: 333  REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            RE+E  R VF+ +    +  W AM++   +N   +E   LF +M+ + G+ P+  T+++ 
Sbjct: 586  RELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQ-LEGVIPDKFTLATT 644

Query: 393  VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
            +  C+ S      + IH    ++GL  D  V+NAL++MYS  G    + + F+ M+ RD 
Sbjct: 645  LDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL 704

Query: 453  VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
            VSWN M   Y   G   +A++L R+MQ                 +   KP+ +T  T L 
Sbjct: 705  VSWNIMSAAYAQAGLAKEAVLLFRQMQ-----------------LEGVKPDKLTFSTTLN 747

Query: 513  GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              G  + ++ GK  HA A  + L +DV V + LV +YAKCG L+ A  +F       V+ 
Sbjct: 748  VSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVL 807

Query: 573  WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
             N II A   HG  +E +++   M  EG     V+P+  T +++ +AC H+GMV EG   
Sbjct: 808  LNAIIGALAQHGFSEEAVKMFWKMQQEG-----VRPDVATLVSIISACGHAGMVEEGCSS 862

Query: 633  FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            F  MK+ +GI P+ +HYAC VDLLGRAG++E A Q+I  MP E D    W+SLLG C++ 
Sbjct: 863  FLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFE-DNTLVWTSLLGTCKLQ 921

Query: 693  QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
             + E+GE  AQ +  L+P  ++ +V+LSNIY +   W  A   RKKM +  V+  PG SW
Sbjct: 922  GDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSW 981

Query: 753  IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
             E G ++H+F+AGD SH ++++++  L+ L   MR+ GY  D      +V +E KE  L 
Sbjct: 982  FEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL---DVEDELKEKALG 1038

Query: 813  GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
             HSE++AIAFG++ TPP TT+++ KNLRVC DCH ATK+IS +  REII+RD  RFHHF 
Sbjct: 1039 YHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFS 1098

Query: 873  NGTCSCGDYW 882
            NGTCSC D W
Sbjct: 1099 NGTCSCKDCW 1108



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 182/635 (28%), Positives = 306/635 (48%), Gaps = 45/635 (7%)

Query: 44  SWIESLRSEARSNQFR-EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW     + A+  +F  +A+  + EM    + P+   F   L A   ++D   G  +H+ 
Sbjct: 199 SWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL 255

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           + +   G   +  +N L+NMYGKCG     + V+K      E D VSWN+MI+     G+
Sbjct: 256 LHEASLGFDPLA-SNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGR 314

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSV--ALACSNLSRRDGLRLGRQVHGNSLRVGEW-NT 217
              A+  FR +    + P+S TL+++  ALA S +         R  HG     G   + 
Sbjct: 315 HGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD----FGAARGFHGRIWESGYLRDV 370

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            I NA+++MYAK G    A  +F+    + D++SWNT++ +      F + V     M L
Sbjct: 371 VIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLL 430

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI P+ VS  ++L ACS+ E LD G++IH+  L        S V + LV MY  C  + 
Sbjct: 431 AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIS 490

Query: 337 CGRRVFDF--ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               VF    +  + +  WN M+  Y QN+  +EA    ++M +  G+ P+A + +SV+ 
Sbjct: 491 EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ-GGVLPDALSFTSVLS 549

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +C  S+   + + +    ++ G  R   ++ AL+ M+ R   +E ++++F++M+  D VS
Sbjct: 550 SCYCSQ---EAQVLRMCILESGY-RSACLETALISMHGRCRELEQARSVFNEMDHGDVVS 605

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W  M++                E ++ +E  N      L+  +    P+  TL T L  C
Sbjct: 606 WTAMVSATA-------------ENRDFKEVHNLFRRMQLEGVI----PDKFTLATTLDTC 648

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            A + L  GK IHA      L  D+ V +AL++MY+ CG    A   F+ M  R++++WN
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
           ++  AY   G  +E + L + M  EG     VKP+++TF         S +VS+G  LF+
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRQMQLEG-----VKPDKLTFSTTLNVSGGSALVSDG-KLFH 762

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            +  + G++        +V L  + GK+++A  L 
Sbjct: 763 ALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLF 797



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 178/656 (27%), Positives = 324/656 (49%), Gaps = 64/656 (9%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS-VTVANTLVNMYGKCG 127
            R D   D   + A+L++     DL+ GK  HAH +    GL   + + N L+NMY +CG
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGK--HAHELIANAGLEQHLFLGNCLINMYVRCG 74

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR-MMLYSNVEPSSFTLVSV 186
           S + + + +F ++ E++ VSW ++I+   + G +  A   FR M+L S+  P+S+TLV++
Sbjct: 75  S-LEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAM 133

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-----EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
             AC+N   RD L +GR +H     +G        T + NA++ MYAK G ++DA  +F 
Sbjct: 134 LNACAN--SRD-LAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFL 190

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +  ++D+VSW  +  + +Q  +F  +A+   R+M L+ + P+ ++  + L AC+ L    
Sbjct: 191 AIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLR--- 247

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK---IALWNAMI 357
            G  +H+  L    L  +    +AL++MY  C + E    VF  ++ ++   +  WNAMI
Sbjct: 248 DGTWLHSL-LHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMI 306

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA-FPDKEGIHGHAIKLG 416
           +   +     +A+ +F ++  + G+ PN+ T+ +++ A   S   F    G HG   + G
Sbjct: 307 SASVEAGRHGDAMAIFRRL-RLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESG 365

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLL 475
             RD  + NA++ MY++ G    +  +F  +  + D +SWNTM+                
Sbjct: 366 YLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGAS------------- 412

Query: 476 REMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAI-R 532
                 E+ K+   V +    +L     PN ++ + +L  C    AL  G++IH+  + R
Sbjct: 413 ------EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTR 466

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQEVL 590
                +  V + LV MY KCG ++ A  VF  MP+  R+++TWNV++ AY  +   +E  
Sbjct: 467 RRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAF 526

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
             L  M+      G V P+ ++F ++ ++C      S+   +      + G   +    A
Sbjct: 527 GALMEMLQ-----GGVLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYRSACLETA 577

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
            ++ + GR  ++E A  + N M  +     +W++++ A    +N +  E+   NLF
Sbjct: 578 -LISMHGRCRELEQARSVFNEM--DHGDVVSWTAMVSA--TAENRDFKEV--HNLF 626



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 173/633 (27%), Positives = 285/633 (45%), Gaps = 79/633 (12%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G+  H      G E + F+ N L+ MY + G +++A  +F   E+R++VSW  ++S+ +Q
Sbjct: 44  GKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103

Query: 261 NDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI---LI 316
              F  A    R M L     P+  ++ ++L AC++   L  G+ IHA      +     
Sbjct: 104 CGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERAST 163

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN-EYDEEALMLFIK 375
             + VG+A+++MY  C  +E    VF  I +K +  W AM   Y Q   +  +AL +F +
Sbjct: 164 TATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M  +  L PN  T  + + AC    +  D   +H    +  LG D    NAL++MY + G
Sbjct: 224 M-LLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNALINMYGKCG 279

Query: 436 RIEISKTIFDDMEVR---DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
             E + ++F  M  R   D VSWN MI+     G+HGDA+ + R ++             
Sbjct: 280 DWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR------------- 326

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
               +   +PNS+TL+T+L    A        +  H     +    DVV+G+A++ MYAK
Sbjct: 327 ----LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAK 382

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           CG  + A  VF  +  + +VI+WN ++ A        +V+    +M+  G     + PN+
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG-----IDPNK 437

Query: 611 VTFIALFAACSHSGMVSEGM---DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           V+FIA+  ACS+S  +  G     L    + DY +E S      +V + G+ G + +A  
Sbjct: 438 VSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSV--ATMLVSMYGKCGSISEAEL 494

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE----PDVASHYVLLSNIY 723
           +   MP        W+ +LGA    QN    E     + +L+    PD  S   +LS+ Y
Sbjct: 495 VFKEMPLPSRSLVTWNVMLGA--YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552

Query: 724 SSAQLWDKAMDVRKKMKEMGVRK----------EPGCSWIE----------FGDEIH--K 761
            S     +A  +R  + E G R              C  +E           GD +    
Sbjct: 553 CS----QEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTA 608

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
            ++    ++  +++H    NL  RM+ EG +PD
Sbjct: 609 MVSATAENRDFKEVH----NLFRRMQLEGVIPD 637



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 295/648 (45%), Gaps = 60/648 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   + + A+   F  A   +  M   S   P+++   A+L A A  +DL++G+ IHA 
Sbjct: 93  SWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAM 152

Query: 103 VVKYGYGLSSVT---VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC--- 156
           + + G   +S T   V N ++NMY KCGS + D   VF  I EKD VSW +M        
Sbjct: 153 IWELGLERASTTATLVGNAMINMYAKCGS-LEDAIAVFLAIPEKDVVSWTAMAGAYAQER 211

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           RF  +  AL  FR ML   + P+  T ++   AC++L  RDG  L   +H  SL    ++
Sbjct: 212 RF--YPDALRIFREMLLQPLAPNVITFITALGACTSL--RDGTWLHSLLHEASL---GFD 264

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
               NAL+ MY K G  + A ++FK+   R   DLVSWN ++S+  +  +  +A+   R+
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 274 MALRGIKPDGVSIASVLPACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           + L G++P+ V++ ++L A +   +     +  H     +  L D   +G+A++ MY  C
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRD-VVIGNAIISMYAKC 383

Query: 333 REVECGRRVFDFISDK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
                   VF  I  K  +  WN M+      +   + +  F  M  +AG+ PN  +  +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHM-LLAGIDPNKVSFIA 442

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDR-YVQNA----LMDMYSRMGRIEISKTIFDD 446
           ++ AC  SEA      IH     L L R R YV+++    L+ MY + G I  ++ +F +
Sbjct: 443 ILNACSNSEALDFGRKIH----SLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498

Query: 447 MEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           M +  R  V+WN M+  Y    +  +A   L EM              L   VL   P++
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM--------------LQGGVL---PDA 541

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           ++  +VL  C      ++  ++    I         + +AL+ M+ +C  L  AR VF+ 
Sbjct: 542 LSFTSVLSSC----YCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNE 597

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M   +V++W  ++ A   + + +EV  L + M  EG     V P++ T       C  S 
Sbjct: 598 MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEG-----VIPDKFTLATTLDTCLAST 652

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            +  G  + +    + G+E        ++++    G   +A      M
Sbjct: 653 TLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 227/463 (49%), Gaps = 24/463 (5%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           +PLP   +R   +W   L + A++++ +EA  + +EM +  + PD  +F +VL +    Q
Sbjct: 499 MPLP---SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           +    + +   +++ GY   S  +   L++M+G+C  ++     VF+ +   D VSW +M
Sbjct: 556 E---AQVLRMCILESGY--RSACLETALISMHGRC-RELEQARSVFNEMDHGDVVSWTAM 609

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           ++       +      FR M    V P  FTL +    C   +    L LG+ +H     
Sbjct: 610 VSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT---LGLGKVIHACVTE 666

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G E +  + NAL+ MY+  G   +A + F++ + RDLVSWN + ++ +Q     EAV+ 
Sbjct: 667 IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            RQM L G+KPD ++ ++ L       ++  GK  HA A  + +  D S V + LV +Y 
Sbjct: 727 FRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVS-VATGLVKLYA 785

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C +++    +F    D  + L NA+I    Q+ + EEA+ +F KM++  G+ P+  T+ 
Sbjct: 786 KCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ-EGVRPDVATLV 844

Query: 391 SVVPACVRSEAFPDKEGIHGH-AIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           S++ AC    A   +EG      +K   G    +++    +D+  R G++E ++ I   M
Sbjct: 845 SIISAC--GHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKM 902

Query: 448 EVRD-TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
              D T+ W +++     C   GDA +  R  Q + E    N+
Sbjct: 903 PFEDNTLVWTSLL---GTCKLQGDAELGERCAQRILELDPHNS 942


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/727 (36%), Positives = 412/727 (56%), Gaps = 61/727 (8%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           N +R       +Q+H   +R    +    + ++++Y  L  + +A  LFK+ +   +++W
Sbjct: 14  NPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++   +    F +A+    +M   G  PD     SVL +C+ +  L  G+ +H + +R
Sbjct: 74  KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133

Query: 312 NDILIDNSFVGSALVDMYCNC----REVECG----------------------------- 338
             +  D  + G+AL++MY        ++  G                             
Sbjct: 134 LGMDCD-LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192

Query: 339 ---RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              RRVF+ +  K +  +N +I GY Q+   E+AL +  +M     L P++ T+SSV+P 
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPI 251

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                     + IHG+ I+ G+  D Y+ ++L+DMY++  RIE S+ +F  +  RD +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N+++ GY   G++ +AL L R+M                    + KP ++   +V+P C 
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQM-----------------VTAKVKPGAVAFSSVIPACA 354

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L+ L  GK++H Y +R    +++ + SALVDMY+KCG +  AR++FD M V + ++W  
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           IIM + +HG G E + L + M  +G     VKPN+V F+A+  ACSH G+V E    F  
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQG-----VKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M   YG+    +HYA V DLLGRAGK+E+AY  I+ M  E      WS+LL +C +H+N+
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE-PTGSVWSTLLSSCSVHKNL 528

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           E+ E  A+ +F ++ +    YVL+ N+Y+S   W +   +R +M++ G+RK+P CSWIE 
Sbjct: 529 ELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
            ++ H F++GD SH   ++++ FL+ + E+M KEGYV DTS VLH+V+EE K  LL GHS
Sbjct: 589 KNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHS 648

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           E+LA+AFGI+NT PGTTIRV KN+R+C DCH A KFISKI  REII+RD  RFHHF  G 
Sbjct: 649 ERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGN 708

Query: 876 CSCGDYW 882
           CSCGDYW
Sbjct: 709 CSCGDYW 715



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 237/459 (51%), Gaps = 44/459 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R     + F +A+ S++EM  S   PD+  FP+VLK+   + DL  G+ +H  +
Sbjct: 72  AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131

Query: 104 VKYGYGLSSVTVANTLVNMYGKC---GS-----DMWD----------------------- 132
           V+ G      T  N L+NMY K    GS     +++D                       
Sbjct: 132 VRLGMDCDLYT-GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190

Query: 133 ----VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
               V +VF+ +  KD VS+N++IA   + G ++ AL   R M  ++++P SFTL SV  
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
             S     D ++ G+++HG  +R G + + +I ++L+ MYAK  R++D++ +F     RD
Sbjct: 251 IFSEYV--DVIK-GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            +SWN++V+   QN ++ EA+   RQM    +KP  V+ +SV+PAC+HL  L  GK++H 
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           Y LR      N F+ SALVDMY  C  ++  R++FD ++      W A+I G+  + +  
Sbjct: 368 YVLRGG-FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNA 426
           EA+ LF +M+   G+ PN     +V+ AC       +  G      K+ GL ++     A
Sbjct: 427 EAVSLFEEMKR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTI 464
           + D+  R G++E +      M V  T S W+T+++  ++
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 204/444 (45%), Gaps = 66/444 (14%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           I +++   + ++     K++HA  +R   L   S   S ++ +Y N + +     +F  +
Sbjct: 8   IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKTL 65

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
               +  W ++I  +       +AL  F++M   +G  P+     SV+ +C         
Sbjct: 66  KSPPVLAWKSVIRCFTDQSLFSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFG 124

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSR---MGR-------------------------- 436
           E +HG  ++LG+  D Y  NALM+MY++   MG                           
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184

Query: 437 -------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
                  I+  + +F+ M  +D VS+NT+I GY   G + DAL ++REM           
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM----------G 234

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
             DL       KP+S TL +VLP       + KGKEIH Y IR  + +DV +GS+LVDMY
Sbjct: 235 TTDL-------KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AK   +  + RVF  +  R+ I+WN ++  Y  +G   E L L + MV       +VKP 
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-----AKVKPG 342

Query: 610 EVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            V F ++  AC+H   +  G  L  Y ++  +G   +    + +VD+  + G ++ A ++
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKI 400

Query: 669 INMMPPEFDKAGAWSSLLGACRIH 692
            + M    D+  +W++++    +H
Sbjct: 401 FDRMNV-LDEV-SWTAIIMGHALH 422



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 39/271 (14%)

Query: 37  SQTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS 94
           S+  C++  SW   +    ++ ++ EA+  + +M  + ++P   AF +V+ A A +  L 
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           LGKQ+H +V++ G+G S++ +A+ LV+MY KCG ++    K+FDR+   D+VSW ++I  
Sbjct: 361 LGKQLHGYVLRGGFG-SNIFIASALVDMYSKCG-NIKAARKIFDRMNVLDEVSWTAIIMG 418

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
               G    A+  F  M    V+P+    V+V  ACS++   D                 
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD---------------EA 463

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           W  F  N++  +Y                 +++L  +  +   L +  K  EA  F+ +M
Sbjct: 464 WGYF--NSMTKVYGL---------------NQELEHYAAVADLLGRAGKLEEAYNFISKM 506

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
               ++P G   +++L +CS  + L+  +++
Sbjct: 507 C---VEPTGSVWSTLLSSCSVHKNLELAEKV 534


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 291/829 (35%), Positives = 464/829 (55%), Gaps = 39/829 (4%)

Query: 64  SYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           + +++ +  ++ +N  +  +L+  A  Q L  G++IH+  VK+     ++ + N +V+MY
Sbjct: 30  AVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMY 89

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
             C S   D    FD + +++  SW  ++A     G+    L A   M    V P + T 
Sbjct: 90  AHCDSP-GDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 148

Query: 184 VSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           ++   +C +  S RDG+R+ + V  + L   E +  + NAL+ MY K G +  AK +F  
Sbjct: 149 ITALGSCGDPESLRDGIRIHQMVVDSRL---EIDPKVSNALLNMYKKCGSLSHAKRVFAK 205

Query: 243 FE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
            E  R+++SW+ +  + + +    EA+   R M L GIK    ++ ++L ACS   ++  
Sbjct: 206 MERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD 265

Query: 302 GKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALWNA 355
           G+ IH+        +++L+ N     A++ MY  C  VE  R+VFD + +  + +  WN 
Sbjct: 266 GRLIHSCIALSGFESELLVAN-----AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 320

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M++ Y  N+  ++A+ L+ +M+    L  +  T  S++ AC  +E       +H   +  
Sbjct: 321 MLSAYVHNDRGKDAIQLYQRMQ----LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVND 376

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
            L ++  V NAL+ MY++ G    ++ +FD ME R  +SW T+I+ Y       +A  L 
Sbjct: 377 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 436

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           ++M  +E EKN ++         R KP+++  +T+L  C  +SAL +GK +   A    L
Sbjct: 437 QQM--LELEKNGSS--------QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGL 486

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLK 594
           ++D  VG+A+V++Y KCG +   RR+FD +  R +V  WN +I  Y   G+  E L+L  
Sbjct: 487 SSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFW 546

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY-GIEPSPDHYACVV 653
            M  EG     V+P+  +F+++  ACSH+G+  +G   F  M  +Y  +  +  H+ CV 
Sbjct: 547 RMEMEG-----VRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVA 601

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLLGR G++++A + +  +P + D A AW+SLL ACR H++++  +  A  L  LEP  A
Sbjct: 602 DLLGRGGRLKEAEEFLEKLPVKPD-AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA 660

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
           + YV LSNIY+  Q W     VRK M E GV+KE G S IE G  +H F  GD +H ++ 
Sbjct: 661 TGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNR 720

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           ++   L  L  +M++ GYVPDT  VLH V+E+EKE LL  HSE+LAIA G+++TP GT +
Sbjct: 721 EIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPL 780

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RV KNLRVC+DCH ATK ISKI  R+I++RD  RFH FK+G CSC DYW
Sbjct: 781 RVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 266/569 (46%), Gaps = 42/569 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A S Q +E + +   M +  ++PD   F   L +    + L  G +IH  V
Sbjct: 112 SWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWD 162
           V     +    V+N L+NMY KCGS +    +VF ++   ++ +SW+ M       G   
Sbjct: 172 VDSRLEIDP-KVSNALLNMYKKCGS-LSHAKRVFAKMERTRNVISWSIMAGAHALHGNVW 229

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMN 221
            AL  FR ML   ++ +   +V++  ACS+ +    ++ GR +H   +L   E    + N
Sbjct: 230 EALRHFRFMLLLGIKATKSAMVTILSACSSPAL---VQDGRLIHSCIALSGFESELLVAN 286

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           A+M MY + G V++A+ +F + ++  RD+VSWN ++S+   ND+  +A+   ++M LR  
Sbjct: 287 AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA- 345

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             D V+  S+L ACS  E +  G+ +H   + ND L  N  VG+ALV MY  C      R
Sbjct: 346 --DKVTYVSLLSACSSAEDVGLGRVLHKQIV-NDELEKNVIVGNALVSMYAKCGSHTEAR 402

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG------LWPNATTMSSVV 393
            VFD +  + I  W  +I+ Y +     EA  LF +M E+        + P+A    +++
Sbjct: 403 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 462

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC    A    + +   A   GL  D+ V  A++++Y + G IE  + IFD +  R  V
Sbjct: 463 NACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDV 522

Query: 454 S-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
             WN MI  Y   GQ  +AL L   M+ ME                  +P+S + +++L 
Sbjct: 523 QLWNAMIAVYAQFGQSHEALKLFWRME-MEG----------------VRPDSFSFVSILL 565

Query: 513 GCGALSALAKGKEIHAYAI---RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
            C       +GK          RN+  T    G  + D+  + G L  A    + +PV+ 
Sbjct: 566 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFG-CVADLLGRGGRLKEAEEFLEKLPVKP 624

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           + + W  ++ A   H + +   E+   ++
Sbjct: 625 DAVAWTSLLAACRNHRDLKRAKEVANKLL 653


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/788 (35%), Positives = 441/788 (55%), Gaps = 36/788 (4%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q HA ++ +G+  + +++   L       G+ ++    +F  +   D   +N ++     
Sbjct: 38  QTHAQIILHGFR-NDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 158 FGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
                 +L  F  +  S +++P+S T  + A++ ++  R D  R GR +HG ++  G  +
Sbjct: 96  NESPHSSLSVFAHLRKSTDLKPNSSTY-AFAISAASGFRDD--RAGRVIHGQAVVDGCDS 152

Query: 217 TFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             ++ + ++ MY K  RV+DA+ +F    ++D + WNT++S   +N+ ++E++   R + 
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                + D  ++  +LPA + L+ L  G +IH+ A +      + +V +  + +Y  C +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLTGFISLYSKCGK 271

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++ G  +F       I  +NAMI GY  N   E +L LF ++  ++G    ++T+ S+VP
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSLVP 330

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
               S        IHG+ +K        V  AL  +YS++  IE ++ +FD+   +   S
Sbjct: 331 V---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN MI+GYT  G   DA+ L REMQ  E                   PN +T+  +L  C
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSE-----------------FSPNPVTITCILSAC 430

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L AL+ GK +H         + + V +AL+ MYAKCG +  ARR+FDLM  +N +TWN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I  YG+HG+GQE L +   M+  G     + P  VTF+ +  ACSH+G+V EG ++F 
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSG-----ITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M   YG EPS  HYAC+VD+LGRAG ++ A Q I  M  E   +  W +LLGACRIH++
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE-PGSSVWETLLGACRIHKD 604

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
             +    ++ LF L+PD   ++VLLSNI+S+ + + +A  VR+  K+  + K PG + IE
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
            G+  H F +GD SH Q ++++  LE L  +MR+ GY P+T   LH+V EEE+E ++  H
Sbjct: 665 IGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVH 724

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SE+LAIAFG++ T PGT IR+ KNLRVC DCH  TK ISKI  R I++RD  RFHHFK+G
Sbjct: 725 SERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDG 784

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 785 VCSCGDYW 792



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 202/438 (46%), Gaps = 28/438 (6%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S  R  E ++ES++       FR+ I        S  + D      +L AVA +Q+L LG
Sbjct: 193 SGYRKNEMYVESIQV------FRDLI------NESCTRLDTTTLLDILPAVAELQELRLG 240

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            QIH+   K G   S   V    +++Y KCG        +F    + D V++N+MI    
Sbjct: 241 MQIHSLATKTG-CYSHDYVLTGFISLYSKCGKIKMGS-ALFREFRKPDIVAYNAMIHGYT 298

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW- 215
             G+ +L+L  F+ ++ S     S TLVS+     +      L L   +HG  L+     
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH------LMLIYAIHGYCLKSNFLS 352

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  +  AL  +Y+KL  ++ A+ LF    ++ L SWN ++S  +QN    +A+   R+M 
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
                P+ V+I  +L AC+ L  L  GK +H   +R+     + +V +AL+ MY  C  +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAKCGSI 471

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              RR+FD ++ K    WN MI+GYG +   +EAL +F +M   +G+ P   T   V+ A
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPTPVTFLCVLYA 530

Query: 396 CVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           C  +    + + I    I + G          ++D+  R G ++ +    + M +    S
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590

Query: 455 -WNTMITGYTICGQHGDA 471
            W T++     C  H D 
Sbjct: 591 VWETLLGA---CRIHKDT 605


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/803 (36%), Positives = 447/803 (55%), Gaps = 44/803 (5%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++L+    I+  S  +Q+HA V+K+             +  +      + D  ++F+ + 
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINL---LHDSLRLFNTLH 69

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
               ++W S+I      G    +L +F  ML S + P      SV  AC+ L     L L
Sbjct: 70  FPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLM---DLNL 126

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G  +HG  +RVG +++ +  NALM MY+KL      + L KS   R  +  + ++  +++
Sbjct: 127 GESLHGYIIRVGLDFDLYTGNALMNMYSKL------RFLKKSGRQR--LGASQVLDEMTE 178

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL-IDNS 319
             + +     L  +  +G K   +   +   +C   E      EI  Y  R++   ++  
Sbjct: 179 RTRSVRTASVL--VGNQGRKVSDIEAFNYDVSCRSREFEAQVLEID-YKPRSEYREMEAC 235

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            +G  + D+  +   V+  R++F+ + +K +  WN +I G  +N    E L +  +M   
Sbjct: 236 NLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGG- 293

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           A L P++ T+SSV+P    +      + IHG +I+ GL  + YV ++L+DMY++  R+  
Sbjct: 294 ANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVD 353

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           S  +F  +  RD +SWN++I G    G   + L   R+M                  + +
Sbjct: 354 SYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQM-----------------LMAK 396

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            KP S +  +++P C  L+ L  GK++H Y  RN    ++ + S+LVDMYAKCG +  AR
Sbjct: 397 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAR 456

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           ++FD M +R++++W  +IM   +HG   + +EL + M  EG     ++PN V F+A+  A
Sbjct: 457 QIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEG-----IEPNYVAFMAVLTA 511

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH+G+V E    F  M  D+GI P  +HYA V DLLGRAG++E+AY  I  MP      
Sbjct: 512 CSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIG-PTG 570

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W++LL ACR+H+NV++ E  A  +  ++P     Y+LL+NIYS+A+ W +A   R  +
Sbjct: 571 SVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASL 630

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           +  G+RK P CSWIE  ++++ F+AGD SH   E++   +E L E M KEGYVPDTS V 
Sbjct: 631 RRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVH 690

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H+V EE+K+ L+C HSE+LAI FGI+NTP GTTIRV KNLRVC DCH ATKFISKI  RE
Sbjct: 691 HDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGRE 750

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I++RD  RFHHFKNGTCSCGDYW
Sbjct: 751 IVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 263/565 (46%), Gaps = 50/565 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R         +++ S+I M  S + PD+  FP+VLKA A + DL+LG+ +H ++
Sbjct: 75  AWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYI 134

Query: 104 VKYGYGLSSVTVANTLVNMYG------KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           ++ G      T  N L+NMY       K G       +V D +TE+ + S  +    +  
Sbjct: 135 IRVGLDFDLYT-GNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTR-SVRTASVLVGN 192

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR-DGLRLGRQVHGNSLRVGEWN 216
            G+    +EAF   +          ++ +     +  R  +   LG+Q+   S  +    
Sbjct: 193 QGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMS--- 249

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
                           VD  + +F+   ++DLVSWNTI++  ++N  + E +  +R+M  
Sbjct: 250 ----------------VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGG 293

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KPD  +++SVLP  +    +  GKEIH  ++R   L    +V S+L+DMY  C  V 
Sbjct: 294 ANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQG-LDAEVYVASSLIDMYAKCTRVV 352

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              RVF  ++++    WN++I G  QN   +E L  F +M  +A + P + + SS++PAC
Sbjct: 353 DSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQM-LMAKIKPKSYSFSSIMPAC 411

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + +HG+  + G   + ++ ++L+DMY++ G I  ++ IFD M +RD VSW 
Sbjct: 412 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWT 471

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI G   C  HG AL  +   + M+ E                +PN +  M VL  C  
Sbjct: 472 AMIMG---CALHGHALDAIELFEQMKTEG--------------IEPNYVAFMAVLTACSH 514

Query: 517 LSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WN 574
              + +  K  ++  +   +A  V   +A+ D+  + G L  A      MP+    + W 
Sbjct: 515 AGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWA 574

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAE 599
            ++ A  +H +  ++ E + N + E
Sbjct: 575 TLLSACRVH-KNVDMAEKVANRILE 598


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/827 (35%), Positives = 459/827 (55%), Gaps = 59/827 (7%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
            EA+L + E  R+ ++PD+     + + V   Q++              + L  +    T 
Sbjct: 811  EALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV------------LEWQLKQLKAYGTK 858

Query: 120  VNMYGKC--GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            + MY     GSD+               ++WN  ++   + G+   A++ F  M+ S V 
Sbjct: 859  LFMYDDDDDGSDV---------------IAWNKTLSWFLQRGETWEAVDCFVDMINSRVA 903

Query: 178  PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
                T V +    + L   + L LG+Q+HG  +R G +    + N L+ MY K G V  A
Sbjct: 904  CDGLTFVVMLSVVAGL---NCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRA 960

Query: 237  KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
            +T+F    + DLVSWNT++S  + +     +V     +   G+ PD  ++ASVL ACS L
Sbjct: 961  RTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020

Query: 297  EM-LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
                    +IHA A++  +++D SFV + L+D+Y    ++E    +F       +A WNA
Sbjct: 1021 GGGCHLATQIHACAMKAGVVLD-SFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNA 1079

Query: 356  MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
            M+ GY  +    +AL L+I M+E +G   N  T+++   A          + I    +K 
Sbjct: 1080 MMHGYIVSGDFPKALRLYILMQE-SGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKR 1138

Query: 416  GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
            G   D +V + ++DMY + G +E ++ IF+++   D V+W TMI+G    GQ   AL   
Sbjct: 1139 GFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTY 1198

Query: 476  REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
              M+                 + + +P+  T  T++  C  L+AL +G++IHA  ++   
Sbjct: 1199 HHMR-----------------LSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC 1241

Query: 536  ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
            A D  V ++LVDMYAKCG +  AR +F       + +WN +I+    HG  +E L+  + 
Sbjct: 1242 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEE 1301

Query: 596  MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
            M + G     V P+ VTFI + +ACSHSG+VSE  + FY M+  YGIEP  +HY+C+VD 
Sbjct: 1302 MKSRG-----VTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDA 1356

Query: 656  LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
            L RAG++ +A ++I+ MP E   A  + +LL ACR+  + E G+  A+ L  LEP  ++ 
Sbjct: 1357 LSRAGRIREAEKVISSMPFE-ASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1415

Query: 716  YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
            YVLLSN+Y++A  W+     R  M++  V+K+PG SW++  +++H F+AGD SH++++ +
Sbjct: 1416 YVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1475

Query: 776  HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
            +  +E + +R+R+EGY+PDT   L +V EE+KE  L  HSEKLAIA+G++ TPP TT+RV
Sbjct: 1476 YNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1535

Query: 836  AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             KNLRVC DCH A K+ISK+  RE++LRD  RFHHF++G CSCGDYW
Sbjct: 1536 IKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 158/526 (30%), Positives = 263/526 (50%), Gaps = 27/526 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W ++L    +  +  EA+  +++M  S +  D   F  +L  VAG+  L LGKQIH  V
Sbjct: 873  AWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            V+ G     V+V N L+NMY K GS +     VF ++ E D VSWN+MI+     G  + 
Sbjct: 933  VRSGLD-QVVSVGNCLINMYVKTGS-VSRARTVFWQMNEVDLVSWNTMISGCALSGLEEC 990

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            ++  F  +L   + P  FT+ SV  ACS+L    G  L  Q+H  +++ G   ++F+   
Sbjct: 991  SVGMFVDLLRGGLLPDQFTVASVLRACSSLG--GGCHLATQIHACAMKAGVVLDSFVSTT 1048

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ +Y+K G++++A+ LF + +  DL SWN ++     +  F +A+     M   G + +
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +++A+   A   L  L  GK+I A  ++    +D  FV S ++DMY  C E+E  RR+F
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLD-LFVISGVLDMYLKCGEMESARRIF 1167

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            + I       W  MI+G  +N  +E AL  +  M  ++ + P+  T +++V AC    A 
Sbjct: 1168 NEIPSPDDVAWTTMISGCVENGQEEHALFTYHHM-RLSKVQPDEYTFATLVKACSLLTAL 1226

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 IH + +KL    D +V  +L+DMY++ G IE ++ +F         SWN MI G 
Sbjct: 1227 EQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVG- 1285

Query: 463  TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                QHG+A      +Q  EE K+R              P+ +T + VL  C     +++
Sbjct: 1286 --LAQHGNA---EEALQFFEEMKSRG-----------VTPDRVTFIGVLSACSHSGLVSE 1329

Query: 523  GKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMP 566
              E + Y+++ +   +  +   S LVD  ++ G +  A +V   MP
Sbjct: 1330 AYE-NFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 173/698 (24%), Positives = 300/698 (42%), Gaps = 118/698 (16%)

Query: 82   AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI- 140
            ++L+      DL LGK+ HA ++  G+      + N L+ MY KCGS +    K+FD   
Sbjct: 631  SILRHAIAASDLPLGKRAHARILTSGHHPDRF-LTNNLITMYSKCGS-LSSARKLFDTTP 688

Query: 141  -TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
             T +D V+WN++++      +    L  FR++  S V  +  TL  V   C   +     
Sbjct: 689  DTSRDLVTWNAILSAHADKARDGFHL--FRLLRRSFVSATRHTLAPVFKMCLLSASPSA- 745

Query: 200  RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
                 +HG ++++G +W+ F+  AL+ +YAK GR+ +A+ LF     RD+V WN ++ + 
Sbjct: 746  --AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAY 803

Query: 259  SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC-SHLEMLD-TGKEIHAYALR----- 311
                   EA++   +    G++PD V++ ++     S   +L+   K++ AY  +     
Sbjct: 804  VDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYD 863

Query: 312  -----NDILIDNSFVG------------SALVDMY--------------------CNCRE 334
                 +D++  N  +                VDM                      NC  
Sbjct: 864  DDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNC-- 921

Query: 335  VECGRRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV----------- 379
            +E G+++   +     D+ +++ N +I  Y +      A  +F +M EV           
Sbjct: 922  LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981

Query: 380  -------------------AGLWPNATTMSSVVPACVR-SEAFPDKEGIHGHAIKLGLGR 419
                                GL P+  T++SV+ AC            IH  A+K G+  
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 420  DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
            D +V   L+D+YS+ G++E ++ +F + +  D  SWN M+ GY + G    AL L   MQ
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101

Query: 480  NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
               E                 + N ITL       G L  L +GK+I A  ++     D+
Sbjct: 1102 ESGE-----------------RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL 1144

Query: 540  VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
             V S ++DMY KCG +  ARR+F+ +P  + + W  +I     +G+ +  L    +M   
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHM--- 1201

Query: 600  GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLLGR 658
              R  +V+P+E TF  L  ACS    + +G  +    +K +   +P       +VD+  +
Sbjct: 1202 --RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAK 1257

Query: 659  AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             G +EDA  L         +  +W++++     H N E
Sbjct: 1258 CGNIEDARGLFKRT--NTSRIASWNAMIVGLAQHGNAE 1293


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/721 (37%), Positives = 418/721 (57%), Gaps = 29/721 (4%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A + +  M  ++ E  +F + SV  AC  +       LG++VHG  ++ G   + F+ NA
Sbjct: 108 AAKIYAYMRGTDTEVDNFVIPSVLKACCLIP---SFLLGQEVHGFVVKNGFHGDVFVCNA 164

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+++G +  A+ LF   E++D+VSW+T++ S  ++    EA+  LR M +  +KP 
Sbjct: 165 LIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPS 224

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRV 341
            + + S+    + L  L  GK +HAY +RN     +   + +AL+DMY  C  +   RRV
Sbjct: 225 EIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRV 284

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +S   I  W AMI  Y       E + LF+KM    G++PN  TM S+V  C  + A
Sbjct: 285 FDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG-EGMFPNEITMLSLVKECGTAGA 343

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H   ++ G      +  A +DMY + G +  ++++FD  + +D + W+ MI+ 
Sbjct: 344 LELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISS 403

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y       +A  +   M                 T    +PN  T++++L  C    +L 
Sbjct: 404 YAQNNCIDEAFDIFVHM-----------------TGCGIRPNERTMVSLLMICAKAGSLE 446

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK IH+Y  +  +  D+++ ++ VDMYA CG ++ A R+F     R++  WN +I  + 
Sbjct: 447 MGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFA 506

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
           MHG G+  LEL + M A G     V PN++TFI    ACSHSG++ EG  LF+KM  ++G
Sbjct: 507 MHGHGEAALELFEEMEALG-----VTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFG 561

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
             P  +HY C+VDLLGRAG +++A++LI  MP   + A  + S L AC++H+N+++GE A
Sbjct: 562 FTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA-VFGSFLAACKLHKNIKLGEWA 620

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+    LEP  + + VL+SNIY+SA  W     +R+ MK+ G+ KEPG S IE    +H+
Sbjct: 621 AKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHE 680

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+ GD  H  +++++  ++ + E++   GY PD SCVLHN+++E+K + L  HSEKLA+A
Sbjct: 681 FIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMA 740

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           +G+++T PG  IR+ KNLRVC+DCH ATK +SKI  REII+RD  RFHHFK G+CSC DY
Sbjct: 741 YGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDY 800

Query: 882 W 882
           W
Sbjct: 801 W 801



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 269/559 (48%), Gaps = 31/559 (5%)

Query: 32  LPLPGSQTRCKESWIES--LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
           +PL   ++    + I S  + S  ++N   +A   Y  M  +D + DNF  P+VLKA   
Sbjct: 77  VPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCL 136

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           I    LG+++H  VVK G+    V V N L+ MY + GS +     +FD+I  KD VSW+
Sbjct: 137 IPSFLLGQEVHGFVVKNGFH-GDVFVCNALIMMYSEVGS-LALARLLFDKIENKDVVSWS 194

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           +MI +  R G  D AL+  R M    V+PS   ++S+    + L+    L+LG+ +H   
Sbjct: 195 TMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELA---DLKLGKAMHAYV 251

Query: 210 LR---VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
           +R    G+    +  AL+ MY K   +  A+ +F       ++SW  ++++    +   E
Sbjct: 252 MRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNE 311

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
            V    +M   G+ P+ +++ S++  C     L+ GK +HA+ LRN   + +  + +A +
Sbjct: 312 GVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL-SLVLATAFI 370

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           DMY  C +V   R VFD    K + +W+AMI+ Y QN   +EA  +F+ M    G+ PN 
Sbjct: 371 DMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTG-CGIRPNE 429

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            TM S++  C ++ +    + IH +  K G+  D  ++ + +DMY+  G I+ +  +F +
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              RD   WN MI+G+ + G    AL L  EM+                  L   PN IT
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEME-----------------ALGVTPNDIT 532

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLM 565
            +  L  C     L +GK +    +     T  V     +VD+  + G L+ A  +   M
Sbjct: 533 FIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSM 592

Query: 566 PVR-NVITWNVIIMAYGMH 583
           P+R N+  +   + A  +H
Sbjct: 593 PMRPNIAVFGSFLAACKLH 611


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 299/836 (35%), Positives = 455/836 (54%), Gaps = 43/836 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R+N  REA+  + ++  S +  D       LK    + D  +G+Q+H   +K G+ L  
Sbjct: 80  SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF-LED 138

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+V  +LV+MY K   D  D   +FD +  K+ VSW S+++   R G  D  +     M 
Sbjct: 139 VSVGTSLVDMYMKT-EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQ 197

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              V P+ FT  +V  A ++ S  +G   G QVH   ++ G E+ TF+ NAL+ MY K  
Sbjct: 198 MEGVNPNGFTFATVLGALADESIIEG---GVQVHAMIVKNGFEFTTFVCNALICMYLKSE 254

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V DA+ +F S   RD V+WN ++   +    +LE      +M L G+K       + L 
Sbjct: 255 MVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALK 314

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI-SDKKI 350
            CS    L+  K++H   ++N        + +AL+  Y  C  V+   ++F    +   +
Sbjct: 315 LCSQQRELNFTKQLHCGVVKNGYEFAQD-IRTALMVTYSKCSSVDEAFKLFSMADAAHNV 373

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV---PACVRSEAFPDKEG 407
             W AMI G+ QN  +++A+ LF +M    G+ PN  T S+V+   P+ + S+       
Sbjct: 374 VTWTAMIGGFVQNNNNKKAVDLFCQMSR-EGVRPNHFTYSTVLAGKPSSLLSQ------- 425

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   IK    +   V  AL+D Y + G +  S  +F  +  +D V+W+ M+TG      
Sbjct: 426 LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA---- 481

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK-GKEI 526
                      Q  + EK       L +  +  KPN  T  +V+  C + +A  + GK+I
Sbjct: 482 -----------QTRDSEKAMEVFIQLVKEGV--KPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           HA A+++  +  + V SAL+ MY+K G +  A +VF     R++++WN +I  YG HG+ 
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           ++ LE+ + M  +G     +  ++VTFI +  AC+H+G+V EG   F  M  DY I+   
Sbjct: 589 KKALEVFQIMQNQG-----LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKX 643

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY+C+VDL  RAG  + A  +IN MP        W +LL ACR+H+N+E+G++AA+ L 
Sbjct: 644 EHYSCMVDLYSRAGMFDKAMDIINGMPFPASPT-IWRTLLAACRVHRNLELGKLAAEKLV 702

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            L+P+ A  YVLLSNI++ A  W++   VRK M E  V+KE GCSWIE  + I  FLAGD
Sbjct: 703 SLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGD 762

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH  S+ ++  LE LS +++  GY PDT+ V H+V EE KE +L  HSE+LAIA+G++ 
Sbjct: 763 VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIA 822

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PPG  I++ KNLR+C DCH   + IS IE R +I+RD  RFHHFK G CSCG YW
Sbjct: 823 LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 173/549 (31%), Positives = 262/549 (47%), Gaps = 41/549 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   AR+    E I    +M    + P+ F F  VL A+A    +  G Q+HA +
Sbjct: 172 SWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMI 231

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDM-WDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G+  ++  V N L+ MY K  S+M  D   VFD +  +D V+WN MI      G + 
Sbjct: 232 VKNGFEFTTF-VCNALICMYLK--SEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYL 288

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
              + F  M  + V+ S     +    C   S++  L   +Q+H   ++ G E+   I  
Sbjct: 289 EGFQMFHRMRLAGVKLSRTVFCTALKLC---SQQRELNFTKQLHCGVVKNGYEFAQDIRT 345

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           ALM  Y+K   VD+A  LF S  D   ++V+W  ++    QN+   +AV    QM+  G+
Sbjct: 346 ALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGV 404

Query: 280 KPDGVSIASVLPA--CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           +P+  + ++VL     S L  L   + I AY  +         V +AL+D Y     V  
Sbjct: 405 RPNHFTYSTVLAGKPSSLLSQLH-AQIIKAYYEK------VPSVATALLDAYVKTGNVVE 457

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             RVF  I  K I  W+AM+TG  Q    E+A+ +FI++ +  G+ PN  T SSV+ AC 
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK-EGVKPNEYTFSSVINACS 516

Query: 398 RSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            S A  +  + IH  A+K G      V +AL+ MYS+ G IE ++ +F   E RD VSWN
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MITGY   GQHGDA   L   Q M+     N    LD+         +T + VL  C  
Sbjct: 577 SMITGY---GQHGDAKKALEVFQIMQ-----NQGLPLDD---------VTFIGVLTACTH 619

Query: 517 LSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WN 574
              + +G++     I++  +       S +VD+Y++ G  + A  + + MP     T W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 575 VIIMAYGMH 583
            ++ A  +H
Sbjct: 680 TLLAACRVH 688



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 213/452 (47%), Gaps = 32/452 (7%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  LF     +D+  +N ++   S+N+   EA+   + +   G+  DG++++  L  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L     G+++H  +L++  L D S VG++LVDMY    + E GR +FD +  K +  W +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVS-VGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +++GY +N  ++E + L  +M ++ G+ PN  T ++V+ A            +H   +K 
Sbjct: 176 LLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G     +V NAL+ MY +   +  ++ +FD M VRD+V+WN MI GY   G + +   + 
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M+                 +   K +     T L  C     L   K++H   ++N  
Sbjct: 295 HRMR-----------------LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY 337

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                + +AL+  Y+KC  ++ A ++F +     NV+TW  +I  +  +   ++ ++L  
Sbjct: 338 EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFC 397

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  EG     V+PN  T+  + A    S ++S+   L  ++   Y  E  P     ++D
Sbjct: 398 QMSREG-----VRPNHFTYSTVLAG-KPSSLLSQ---LHAQIIKAY-YEKVPSVATALLD 447

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
              + G V ++ ++   +P +     AWS++L
Sbjct: 448 AYVKTGNVVESARVFYSIPAK--DIVAWSAML 477


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 303/790 (38%), Positives = 440/790 (55%), Gaps = 46/790 (5%)

Query: 24  PPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFP 81
           P A  A+SLP           W   +R    + Q   A+L Y++M    +   PD    P
Sbjct: 97  PRAAAASSLP-----------WNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLP 145

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
            V+K+ A +  +SLG+ +H      G   + V V + LV MY   G  + +    FD I 
Sbjct: 146 YVVKSCAALGAMSLGRLVHRTARAIGLA-NDVYVGSALVKMYADAGL-LGNARDAFDGIP 203

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           E+D V WN M+    + G  D A+  FR M  S  EP+  TL      C+  +    L  
Sbjct: 204 ERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDA---DLLS 260

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G Q+H  +++ G E    + N L+AMYAK   +DDA  LF+     DLV+WN ++S   Q
Sbjct: 261 GAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQ 320

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N  F+EA      M   G +PD +++ S+LPA + L  L  GKE+H Y +RN + +D  F
Sbjct: 321 NGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMD-VF 379

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           + SALVD+Y  CR+V   + ++D      + + + MI+GY  N   EEAL +F  + E  
Sbjct: 380 LVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQC 439

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PNA T++SV+P C    A P  + IHG+ ++    R  YV++ALMDMY++ GR+++S
Sbjct: 440 -IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             IF  M  +D V+WN+MI+ ++  G+  +AL L R+M  ME  K               
Sbjct: 499 HYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQM-CMEGIKY-------------- 543

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
             N+IT+   L  C +L A+  GKEIH   I+  +  D+   SAL+DMYAKCG L  A R
Sbjct: 544 --NNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALR 601

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ MP +N ++WN II AYG HG  +E + LL  M  EG      KP+ VTF+AL +AC
Sbjct: 602 VFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEG-----YKPDHVTFLALISAC 656

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           +H+G+V EG+ LF  M   Y I P  +H+AC+VDL  R+GK++ A Q I  MP + D AG
Sbjct: 657 AHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPD-AG 715

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W +LL ACR+H+NVE+ +IA+Q LF L+P  + +YVL+SNI + A  WD    VR+ MK
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMK 775

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV--PDTSCV 798
           +  + K PG SW++  +  H F+A D SH +SE ++  L+ L + +R+EGYV  PD    
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDLCHP 835

Query: 799 LHNVNEEEKE 808
           +H  N  + E
Sbjct: 836 MHPDNNTQVE 845



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 178/628 (28%), Positives = 310/628 (49%), Gaps = 49/628 (7%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS---VTVANTLVNMY--GKCGSDMWDVYKV 136
           AVL+       L LG QIHA  V  G  LS    + +   L+ MY   +   D   V+  
Sbjct: 37  AVLRGCVSAPHLPLGLQIHARAVVSG-ALSDHNHLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS--SFTLVSVALACSNLS 194
             R      + WN +I      G+  LA+  +  M      PS  + TL  V  +C+ L 
Sbjct: 96  LPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALG 155

Query: 195 RRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               + LGR VH  +  +G  N  ++ +AL+ MYA  G + +A+  F    +RD V WN 
Sbjct: 156 ---AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNV 212

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++    +      AV   R M   G +P+  ++A  L  C+    L +G ++H+ A++  
Sbjct: 213 MMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG 272

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +  + + V + L+ MY  C+ ++   R+F+ +    +  WN MI+G  QN    EA  LF
Sbjct: 273 LEPEVA-VANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLF 331

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             M+  +G  P++ T+ S++PA          + +HG+ ++  +  D ++ +AL+D+Y +
Sbjct: 332 YDMQR-SGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFK 390

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              + +++ ++D     D V  +TMI+GY + G   +AL + R              Y L
Sbjct: 391 CRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFR--------------YLL 436

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           ++ +   KPN++T+ +VLPGC +++AL  G++IH Y +RN       V SAL+DMYAKCG
Sbjct: 437 EQCI---KPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCG 493

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            L+ +  +F  M  ++ +TWN +I ++  +G+ QE L+L + M  EG     +K N +T 
Sbjct: 494 RLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEG-----IKYNNITI 548

Query: 614 IALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            A  +AC+     + G    G+ +   +K D   E      + ++D+  + G +E A ++
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIKGPIKADIFAE------SALIDMYAKCGNLELALRV 602

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVE 696
              MP + +   +W+S++ A   H  V+
Sbjct: 603 FEFMPDKNEV--SWNSIISAYGAHGLVK 628


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/680 (40%), Positives = 403/680 (59%), Gaps = 42/680 (6%)

Query: 206 HGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           HGNS           NA L+  YA+LG ++ A+ +F       + +WN ++ + S+    
Sbjct: 38  HGNS-----------NAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAM 86

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
            EA+    +MA  G++PD  +   VL AC+    L +G+E    A+ +    D+ FVG+A
Sbjct: 87  FEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV-DQGYGDDVFVGAA 145

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE--VAGL 382
           ++++Y  C +++   RVFD +  + +  W  MITG  QN    EA+ ++ +M +  V G 
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG- 204

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
             +   M  ++ AC           IHG+ I+  +  D  VQ +L+DMY++ G +E++  
Sbjct: 205 --DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F  M  ++ +SW+ +I+G+   G  G+AL L+ +MQ+                    KP
Sbjct: 263 VFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQS-----------------FGYKP 305

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +S++L++VL  C  +  L  GK +H Y +R  L  D V  +A++DMY+KCG L+FAR VF
Sbjct: 306 DSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVF 364

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D +  R+ I+WN II +YG+HG G+E L L   M     R   VKP+  TF +L +A SH
Sbjct: 365 DQISFRDSISWNAIIASYGIHGSGEEALSLFLQM-----RETNVKPDHATFASLLSAFSH 419

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           SG+V +G   F  M ++Y I+PS  HYAC+VDLL RAG+VE+A +LI  M  E   A  W
Sbjct: 420 SGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIA-IW 478

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            +LL  C  H    IGE+AA+ +  L PD    Y L+SN +++A+ WD+  +VRK MK+ 
Sbjct: 479 VALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKT 538

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           G++K PG S +E   ++H FL  D SH Q E++   L  L   M+  GYVP T  VLHN+
Sbjct: 539 GMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNL 598

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            EE KE +LC HSE+LAIAFG+LNT PGT + + KNLRVC DCH+ATKFISKI +REI++
Sbjct: 599 EEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVV 658

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RDV+RFHHFK+G CSCGDYW
Sbjct: 659 RDVKRFHHFKDGVCSCGDYW 678



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 216/436 (49%), Gaps = 18/436 (4%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           ++W   + + +R     EA+  Y  M    ++PD+  +  VLKA     DL  G++    
Sbjct: 71  DAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQ 130

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            V  GYG   V V   ++N+Y KCG  M +  +VFD++  +D V W +MI  L + G+  
Sbjct: 131 AVDQGYG-DDVFVGAAVLNLYAKCGK-MDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAR 188

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A++ +R M    VE     ++ +  AC+ L      ++G  +HG  +R     +  +  
Sbjct: 189 EAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHS---KMGLSIHGYMIRKDIIMDVIVQT 245

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK G ++ A  +F+    ++++SW+ ++S  +QN     A+  +  M   G KP
Sbjct: 246 SLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKP 305

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D VS+ SVL ACS +  L  GK +H Y +R   L  +    +A++DMY  C  +   R V
Sbjct: 306 DSVSLVSVLLACSQVGFLKLGKSVHGYIVRR--LHFDCVSSTAVIDMYSKCGSLSFARTV 363

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD IS +    WNA+I  YG +   EEAL LF++M E   + P+  T +S++ A   S  
Sbjct: 364 FDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRE-TNVKPDHATFASLLSAFSHSGL 422

Query: 402 FPDKE---GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNT 457
                    I  +  K+      Y    ++D+ SR GR+E ++ + + M     ++ W  
Sbjct: 423 VEKGRYWFSIMVNEYKIQPSEKHYA--CMVDLLSRAGRVEEAQELIESMITEPGIAIWVA 480

Query: 458 MITGYTICGQHGDALM 473
           +++G   C  HG  L+
Sbjct: 481 LLSG---CLNHGKFLI 493



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 27/291 (9%)

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
           + S+  P    IH   I  G+         L+  Y+R+G IE ++ +FD        +WN
Sbjct: 15  ITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWN 74

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI  Y+  G   +AL L   M +              E V   +P+S T   VL  C  
Sbjct: 75  AMIIAYSRRGAMFEALSLYHRMAS--------------EGV---RPDSSTYTVVLKACTR 117

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
              L  G+E    A+      DV VG+A++++YAKCG ++ A RVFD M  R+++ W  +
Sbjct: 118 SLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTM 177

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YK 635
           I     +G+ +E +++ + M  +      V+ + V  + L  AC+  G    G+ +  Y 
Sbjct: 178 ITGLAQNGQAREAVDIYRQMHKK-----RVEGDGVVMLGLIQACTTLGHSKMGLSIHGYM 232

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           ++ D  ++        +VD+  + G +E A  +   M   +    +WS+L+
Sbjct: 233 IRKDIIMDVIVQ--TSLVDMYAKNGHLELASCVFRRML--YKNVISWSALI 279


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/750 (35%), Positives = 421/750 (56%), Gaps = 96/750 (12%)

Query: 204 QVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q H   L+ G  N  +I   L+A Y+     +DA  + +S  D  + S+++++ +L++  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            F +++    +M   G+ PD   + ++   C+ L     GK+IH  +  + + +D +FV 
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD-AFVQ 154

Query: 323 SALVDMYCNCREVECGRRVFDFISDK---------------------------------- 348
            ++  MY  C  +   R+VFD +SDK                                  
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 349 -KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
             I  WN +++G+ ++ Y +EA+++F K+  + G  P+  T+SSV+P+   SE       
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRL 273

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD---------------- 451
           IHG+ IK GL +D+ V +A++DMY + G +    ++F+  E+ +                
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333

Query: 452 -------------------TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
                               VSW ++I G    G+  +AL L REMQ             
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ------------- 380

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
               V   KPN +T+ ++LP CG ++AL  G+  H +A+R  L  +V VGSAL+DMYAKC
Sbjct: 381 ----VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +N ++ VF++MP +N++ WN ++  + MHG+ +EV+ + ++++        +KP+ ++
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-----RLKPDFIS 491

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F +L +AC   G+  EG   F  M ++YGI+P  +HY+C+V+LLGRAGK+++AY LI  M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E D    W +LL +CR+  NV++ EIAA+ LF LEP+    YVLLSNIY++  +W + 
Sbjct: 552 PFEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             +R KM+ +G++K PGCSWI+  + ++  LAGD SH Q +Q+   ++ +S+ MRK G+ 
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           P+    LH+V E+E+E +L GHSEKLA+ FG+LNTP GT ++V KNLR+C DCH   KFI
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           S    REI +RD  RFHHFK+G CSCGD+W
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 244/545 (44%), Gaps = 104/545 (19%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q HA ++K G   +   ++  L+  Y        D   V   I +    S++S+I  L +
Sbjct: 36  QAHARILKSG-AQNDGYISAKLIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTK 93

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
              +  ++  F  M    + P S  L ++   C+ LS     ++G+Q+H  S   G + +
Sbjct: 94  AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS---AFKVGKQIHCVSCVSGLDMD 150

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRD----------------------------- 247
            F+  ++  MY + GR+ DA+ +F    D+D                             
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210

Query: 248 ------LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
                 +VSWN I+S  +++    EAV+  +++   G  PD V+++SVLP+    EML+ 
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMY-----------------------CNCREVECG 338
           G+ IH Y ++  +L D   + SA++DMY                       CN       
Sbjct: 271 GRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329

Query: 339 R--------RVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           R         +F+   ++ + L    W ++I G  QN  D EAL LF +M+ VAG+ PN 
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ-VAGVKPNH 388

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            T+ S++PAC    A       HG A+++ L  + +V +AL+DMY++ GRI +S+ +F+ 
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  ++ V WN+++ G+++   HG A    +E+ ++ E   R           R KP+ I+
Sbjct: 449 MPTKNLVCWNSLMNGFSM---HGKA----KEVMSIFESLMRT----------RLKPDFIS 491

Query: 507 LMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
             ++L  CG +    +G +        Y I+  L       S +V++  + G L  A  +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCMVNLLGRAGKLQEAYDL 547

Query: 562 FDLMP 566
              MP
Sbjct: 548 IKEMP 552



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 78/415 (18%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
            ++  F ++I  +  M    + PD+   P + K  A +    +GKQIH      G  + +
Sbjct: 92  TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--------------------------- 145
             V  ++ +MY +CG  M D  KVFDR+++KD                            
Sbjct: 152 F-VQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209

Query: 146 --------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
                   VSWN +++   R G    A+  F+ + +    P   T+ SV     ++   +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL---PSVGDSE 266

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFE------------ 244
            L +GR +HG  ++ G   +  +++A++ MY K G V    +LF  FE            
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326

Query: 245 -----------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                                  + ++VSW +I++  +QN K +EA+   R+M + G+KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I S+LPAC ++  L  G+  H +A+R   L+DN  VGSAL+DMY  C  +   + V
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIV 445

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           F+ +  K +  WN+++ G+  +   +E + +F  +     L P+  + +S++ AC
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSAC 499



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 43/296 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    RS   +EA++ + ++      PD     +VL +V   + L++G+ IH +V
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS----------------------------------- 128
           +K G  L    V + +++MYGK G                                    
Sbjct: 279 IKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337

Query: 129 -DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            +M++++K  ++  E + VSW S+IA   + GK   ALE FR M  + V+P+  T+ S+ 
Sbjct: 338 LEMFELFK--EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC N++    L  GR  HG ++RV    N  + +AL+ MYAK GR++ ++ +F     +
Sbjct: 396 PACGNIA---ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +LV WN++++  S + K  E +     +    +KPD +S  S+L AC  + + D G
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ +  EA+  + EM  + ++P++   P++L A   I  L  G+  H   
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+  + L +V V + L++MY KCG  ++  +  VF+ +  K+ V WNS++      GK  
Sbjct: 415 VRV-HLLDNVHVGSALIDMYAKCGRINLSQI--VFNMMPTKNLVCWNSLMNGFSMHGKAK 471

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG----LRLGRQVHGNSLRVGEWNTF 218
             +  F  ++ + ++P   +  S+  AC  +   D      ++  + +G   R+  +   
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--- 528

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             + ++ +  + G++ +A  L K    + D   W  +++S
Sbjct: 529 --SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/811 (36%), Positives = 449/811 (55%), Gaps = 35/811 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV--ANTLVNMYGKCGSDMWDV 133
           D++A    L+      D   G+ +HA VV+ G G++ +    AN L+N Y K G  +   
Sbjct: 44  DSYACARFLQRCIARGDARAGRAVHARVVQRG-GVAQLDTFCANVLLNFYAKLGP-LATA 101

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            ++FD + E+++VS+ +++      G+++ ALE FR +     E + F L ++      L
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKV---L 158

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
              D   L   +H  + ++G + N F+  AL+  Y+  G V  A+ +F     +D V+W 
Sbjct: 159 VTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWT 218

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            +VS  S+ND    A+    +M + G KP+   + S L A   L     GK IH  +++ 
Sbjct: 219 AMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT 278

Query: 313 DILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
             L D    VG AL+DMY  C ++E    +F+ I    + LW+ +I+ Y Q+  +E+A  
Sbjct: 279 --LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFE 336

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F++M   + + PN  ++S V+ AC         E IH  AIKLG   + +V NALMDMY
Sbjct: 337 MFLRMMR-SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMY 395

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++   +E S  IF  ++  + VSWNT+I GY   G   DAL +  EM+       +    
Sbjct: 396 AKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQ---- 451

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                        +T  +VL  C   S++    +IH+   ++    D +V ++L+D YAK
Sbjct: 452 -------------VTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAK 498

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG +  A +VF+ +   +V++WN II AY +HG     LEL   M        ++K N+V
Sbjct: 499 CGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRM-----NKSDIKANDV 553

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF++L + C  +G+V++G+ LF  M  D+ I+PS +HY C+V LLGRAG++ DA + I  
Sbjct: 554 TFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGD 613

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           +P        W +LL +C +H+NV +G  AA+ +  +EP   + YVLLSN+Y++A + D+
Sbjct: 614 IPST-PSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDE 672

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
               RK M+ +GV+KE G SW+E   E+H F  G   H     ++  LE L+ +  +EGY
Sbjct: 673 VALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGY 732

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           VPD + VLH+V+EEEK  +L  HSE+LA+A+G+  TPPG  IR+ KNLR C DCH   K 
Sbjct: 733 VPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKV 792

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISKI  REII+RD+ RFHHF+ G CSCGDYW
Sbjct: 793 ISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 248/503 (49%), Gaps = 32/503 (6%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVL 84
           P  TA  L   G   R + S++  ++  A   +F EA+  +  + R   + ++F    +L
Sbjct: 97  PLATARRL-FDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTIL 155

Query: 85  KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
           K +  +    L   IHA   K G+  ++  V   L++ Y  CG+ +     VFD I  KD
Sbjct: 156 KVLVTMDAPGLACGIHACACKLGHDRNAF-VGTALIDAYSLCGA-VCHARCVFDGIVGKD 213

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
            V+W +M++        + AL  F  M  +  +P+ F L S   A   LS      LG+ 
Sbjct: 214 AVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLS---SALLGKG 270

Query: 205 VHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS---Q 260
           +HG S++ + +    +  AL+ MYAK G ++DA  +F+     D++ W+ ++S  +   Q
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N++  E  MFLR M    + P+  S++ VL AC+++  L+ G++IH  A++        F
Sbjct: 331 NEQAFE--MFLRMMR-SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYE-SELF 386

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VG+AL+DMY  CR +E    +F  + D     WN +I GY Q+ + E+AL +F +M   A
Sbjct: 387 VGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEM-RAA 445

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            +     T SSV+ AC  + +      IH    K     D  V N+L+D Y++ G I  +
Sbjct: 446 HMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDA 505

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             +F+ +   D VSWN++I+ Y + G+  +AL L   M       N++++          
Sbjct: 506 LKVFESIVECDVVSWNSIISAYALHGRATNALELFDRM-------NKSDI---------- 548

Query: 501 KPNSITLMTVLPGCGALSALAKG 523
           K N +T +++L  CG+   + +G
Sbjct: 549 KANDVTFVSLLSVCGSTGLVNQG 571


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/719 (38%), Positives = 411/719 (57%), Gaps = 50/719 (6%)

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGR 232
           +N+ P +FT      ACSN      L L   +H +S+  G   N F+ +AL+ +Y K  R
Sbjct: 105 TNLSPDNFTYAFAVAACSN---DKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSR 158

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           V  A+ +F    +RD V WNT+++ L +N  F +++   R+M   G++ D  ++ +VLPA
Sbjct: 159 VVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            + L+ L  G  I   AL+      + +V + L+ +Y  C +V   R +F  I+   +  
Sbjct: 219 AAELQELKVGMGIQCLALKIGFGFCD-YVLTGLISLYSKCGDVNTARLLFRRINRPDLIA 277

Query: 353 WNAMITGYGQNEYDEEALMLF---------IKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           +NAMI+G+  N   E ++ LF         +    + GL P  +    +  AC       
Sbjct: 278 YNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC------- 330

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHG  +K G+  +  V  A   +Y+++  I++++ +FD+   +  V+WN MI+GYT
Sbjct: 331 ---SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYT 387

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G    A+ L +EM   E                   PN++T+ T+L  C  L +L+ G
Sbjct: 388 QNGSTETAISLFKEMMKTEF-----------------TPNAVTITTILSACAQLGSLSFG 430

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K +H       L  ++ V +ALVDMYAKCG ++ A ++FD M  +N +TWN +I  YG+H
Sbjct: 431 KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLH 490

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G G E L+L   M+  G       P+ VTF+++  ACSH+G+V EG ++F+ M + Y IE
Sbjct: 491 GYGHEALKLYNEMLHLG-----YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIE 545

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P  +HYAC+VD+LGR+G++E A + I  MP E   A  W +LLGAC IH++ +I  +A++
Sbjct: 546 PLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPA-VWGTLLGACMIHKDTDIARLASE 604

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            LF L+P    +YVLLSNIYS  + + KA  +R+ +K+  + K PGC+ IE     H F+
Sbjct: 605 RLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFV 664

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           +GD SH  +  ++  LE L+ +MR+ GY  +T   LH+V EEEKE  +  HSEKLAIAFG
Sbjct: 665 SGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFG 724

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++ T PG  IR+ KNLRVC DCH ATKFISKI  R I++RD  RFHHFK+G CSCGDYW
Sbjct: 725 LITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 268/526 (50%), Gaps = 33/526 (6%)

Query: 65  YIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           Y  + R +++ PDNF +   + A +  + L L   +HAH +  GYG S+V V + LV++Y
Sbjct: 98  YTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYG-SNVFVGSALVDLY 153

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
            K    ++   KVFD + E+D V WN+MI  L +   +D +++ FR M+   V   S T+
Sbjct: 154 CKFSRVVY-ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTV 212

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            +V  A + L     L++G  +   +L++G  +  +++  L+++Y+K G V+ A+ LF+ 
Sbjct: 213 TAVLPAAAELQE---LKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRR 269

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
               DL+++N ++S  + N     +V   R++   G +    +I  ++P  S    L   
Sbjct: 270 INRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLA 329

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
             IH + +++ I++ N  V +A   +Y    E++  R +FD   +K +  WNAMI+GY Q
Sbjct: 330 CSIHGFCVKSGIIL-NPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQ 388

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGRDR 421
           N   E A+ LF +M +     PNA T+++++ AC +  +    + +H H IK   L  + 
Sbjct: 389 NGSTETAISLFKEMMKTE-FTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNI 446

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           YV  AL+DMY++ G I  +  +FD M  ++TV+WNTMI GY + G   +AL L  EM + 
Sbjct: 447 YVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLH- 505

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVV 540
                           L   P+++T ++VL  C     + +G+EI H    +  +   + 
Sbjct: 506 ----------------LGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIE 549

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
             + +VD+  + G L  A      MPV      W  ++ A  +H +
Sbjct: 550 HYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 213/435 (48%), Gaps = 25/435 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    ++  F ++I  + EM    ++ D+    AVL A A +Q+L +G  I    +
Sbjct: 177 WNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLAL 236

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G     V   L+++Y KCG D+     +F RI   D +++N+MI+     G  + +
Sbjct: 237 KIGFGFCDY-VLTGLISLYSKCG-DVNTARLLFRRINRPDLIAYNAMISGFTANGGTECS 294

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           ++ FR +L+S    SS T+V +    S       L L   +HG  ++ G   N  +  A 
Sbjct: 295 VKLFRELLFSGERVSSSTIVGLIPLHSPFGH---LHLACSIHGFCVKSGIILNPTVSTAF 351

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            A+Y KL  +D A+ LF    ++ +V+WN ++S  +QN     A+   ++M      P+ 
Sbjct: 352 TAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNA 411

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V+I ++L AC+ L  L  GK +H + ++++ L  N +V +ALVDMY  C  +    ++FD
Sbjct: 412 VTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFD 470

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +S+K    WN MI GYG + Y  EAL L+ +M  + G  P+A T  SV+ AC  +    
Sbjct: 471 SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHL-GYNPSAVTFLSVLYACSHAGLVG 529

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYS-------RMGRIEISKTIFDDMEVR-DTVSW 455
           + E I  + +      ++Y    L++ Y+       R G++E +      M V      W
Sbjct: 530 EGEEIFHNMV------NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVW 583

Query: 456 NTMITGYTICGQHGD 470
            T++     C  H D
Sbjct: 584 GTLLGA---CMIHKD 595



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++     AI  + EM +++  P+      +L A A +  LS GK +H H+
Sbjct: 378 AWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HL 436

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K      ++ V+  LV+MY KCG ++ + +++FD ++EK+ V+WN+MI      G    
Sbjct: 437 IKSENLEPNIYVSTALVDMYAKCG-NISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL+ +  ML+    PS+ T +SV  ACS+
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSH 524


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 294/828 (35%), Positives = 455/828 (54%), Gaps = 65/828 (7%)

Query: 67  EMTRSDIQP-----DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-YGLSSVTVANTLV 120
           E+T   I P     D+FA    L+      D   G+ +H HVV+ G  G   +  AN L+
Sbjct: 44  ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           NMYGK G  +    ++FDR+ E++ VS+ +++    + G ++ A   FR + +   E + 
Sbjct: 104 NMYGKLGP-LASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162

Query: 181 F---TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
           F   T++ +A+A       D   L   VH  + ++G + N F+ + L+  Y+    V DA
Sbjct: 163 FVLTTMLKLAIA------MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +F     +D V W  +VS  S+ND          + A R  +           +CS L
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSEND--------CPENAFRCAQ-----------SCSLL 257

Query: 297 EMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            +    + IH  A++  ND       VG AL+DMY  C +++  R  F+ I    + L +
Sbjct: 258 AISCARQGIHGCAIKTLNDT---EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 314

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI+ Y Q+  +E+A  LF+++   + L PN  ++SSV+ AC         + IH HAIK
Sbjct: 315 FMISRYAQSNQNEQAFELFLRLMRSSVL-PNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 373

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           +G   D +V NALMD Y++   ++ S  IF  +   + VSWNT++ G++  G   +AL +
Sbjct: 374 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 433

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EMQ  +    +                 +T  +VL  C + +++    +IH    ++ 
Sbjct: 434 FCEMQAAQMPCTQ-----------------VTYSSVLRACASTASIRHAGQIHCSIEKST 476

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
              D V+G++L+D YAKCG +  A +VF  +  R++I+WN II  Y +HG+  + LEL  
Sbjct: 477 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 536

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M         V+ N++TF+AL + C  +G+V+ G+ LF  M+ D+GI+PS +HY C+V 
Sbjct: 537 RM-----NKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVR 591

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGRAG++ DA Q I  +P     A  W +LL +C IH+NV +G  +A+ +  +EP   +
Sbjct: 592 LLGRAGRLNDALQFIGDIPSA-PSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 650

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLLSN+Y++A   D+   +RK M+ +GVRK PG SW+E   EIH F  G   H     
Sbjct: 651 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRV 710

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L+ +  +EGY+PD + VLH+V++E+K  +L  HSE+LA+A+G++ TPPG  IR
Sbjct: 711 INAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIR 770

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR C DCH A   ISKI  REII+RD+ RFHHF++G CSCGDYW
Sbjct: 771 ILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 17/200 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S    EA+  + EM  + +      + +VL+A A    +    QIH  +
Sbjct: 413 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 472

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  +   +V + N+L++ Y KCG  + D  KVF  + E+D +SWN++I+     G+   
Sbjct: 473 EKSTFNNDTV-IGNSLIDTYAKCGY-IRDALKVFQHLMERDIISWNAIISGYALHGQAAD 530

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN-------LSRRDGLRLGRQVHGNSLRVGEWN 216
           ALE F  M  SNVE +  T V++   C +       LS  D +R+    HG    +  + 
Sbjct: 531 ALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRID---HGIKPSMEHYT 587

Query: 217 TFIMNALMAMYAKLGRVDDA 236
             +      +  + GR++DA
Sbjct: 588 CIVR-----LLGRAGRLNDA 602


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/712 (39%), Positives = 411/712 (57%), Gaps = 35/712 (4%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRV 233
           + P SFT   +  A        G     Q+H  +LR+G    N F   +L+  Y + GRV
Sbjct: 65  LRPDSFTFPPLVRAAP------GPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRV 118

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            +A  +F    +RD+ +WN ++S L +N +  +AV  L +M   G+  D V+++SVLP C
Sbjct: 119 AEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC 178

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L        +H YA+++  L    FV +AL+D+Y     +     VF  ++ + +  W
Sbjct: 179 VVLGDRALALVMHVYAVKHG-LSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTW 237

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N++I+   Q      A+ LF  M E +G+ P+  T+ S+  A  +       + +H +  
Sbjct: 238 NSIISANEQGGKVAAAVELFHGMME-SGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVR 296

Query: 414 KLGLG-RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           + G    D    NA++DMY++M +I+ ++ +FD++  RD VSWNT+ITGY   G   +A+
Sbjct: 297 RRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAI 356

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            +  +M N E  K                P   T ++VLP    L  L +G  +HA +I+
Sbjct: 357 RIYNDMHNHEGLK----------------PIQGTFVSVLPAYSYLGGLQQGMRMHALSIK 400

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             L  DV V + L+D+YAKCG L  A  +F+ MP R+   WN II   G+HG G + L L
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSL 460

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M  E     E+KP+ VTF++L AACSH+G+V +G   F  M+  YGI P   HY C+
Sbjct: 461 FSQMQQE-----EIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCM 515

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VD+LGRAG++++A++ I  MP + D A  W +LLGACRIH NVE+G++A+QNLF L+P+ 
Sbjct: 516 VDMLGRAGQLDEAFEFIQSMPIKPDSA-VWGALLGACRIHGNVEMGKVASQNLFELDPEN 574

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS--HQ 770
             +YVL+SN+Y+    WD    VR  ++   ++K PG S +E    +  F +G  +  H 
Sbjct: 575 VGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHP 634

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           Q E++   L +L  +M+  GYVPD S VL +V E+EKE +L  HSE+LAIAFGI+NTPPG
Sbjct: 635 QHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPG 694

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T + + KNLRVC DCH ATK+ISKI  REII+RD  RFHHFK+G CSCGD+W
Sbjct: 695 TPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 156/331 (47%), Gaps = 19/331 (5%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   +W   + +  +  +   A+  +  M  S + PD     ++  AVA   D   
Sbjct: 228 GMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELG 287

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K +H +V + G+ +  +   N +V+MY K  S +    KVFD + ++D VSWN++I   
Sbjct: 288 AKSVHCYVRRRGWDVGDIIAGNAMVDMYAKM-SKIDAAQKVFDNLPDRDVVSWNTLITGY 346

Query: 156 CRFGKWDLALEAFR----MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
            + G   LA EA R    M  +  ++P   T VSV  A S L    GL+ G ++H  S++
Sbjct: 347 MQNG---LANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLG---GLQQGMRMHALSIK 400

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   + ++   L+ +YAK G++ +A  LF+    R    WN I++ L  +    +A+  
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSL 460

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             QM    IKPD V+  S+L ACSH  ++D G+           ++  +   + +VDM  
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520

Query: 331 NCREVECGRRVFDFISDKKI----ALWNAMI 357
              +++     F+FI    I    A+W A++
Sbjct: 521 RAGQLD---EAFEFIQSMPIKPDSAVWGALL 548


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 289/773 (37%), Positives = 413/773 (53%), Gaps = 89/773 (11%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML +      FTL  V  AC  L      R G   HG     G E N FI NAL+AMY++
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELP---SYRCGSAFHGLICCNGFESNVFICNALVAMYSR 57

Query: 230 LGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKFLEAVMFLRQMAL------RGIK 280
            G +++A  +F     R   D++SWN+IVS+  ++     A+    +M L         +
Sbjct: 58  CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 117

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D +SI ++LPAC  L+ +   KE+H  A+RN   +D  FVG+AL+D Y  C  +E   +
Sbjct: 118 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD-VFVGNALIDAYAKCGLMENAVK 176

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE---------------------- 378
           VF+ +  K +  WNAM+ GY Q+   + A  LF  M +                      
Sbjct: 177 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 236

Query: 379 ------------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL----------G 416
                        +G  PN  T+ SV+ AC    AF     IH +++K           G
Sbjct: 237 SHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGG 296

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDD--MEVRDTVSWNTMITGYTICGQHGDALML 474
              D  V NAL+DMYS+    + +++IFDD  +E R+ V+W  MI G+   G   DAL L
Sbjct: 297 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 356

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRP---KPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
             EM                  +  P    PN+ T+  +L  C  L+A+  GK+IHAY +
Sbjct: 357 FVEM------------------ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 398

Query: 532 RNML--ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           R+    ++   V + L++MY+KCG ++ AR VFD M  ++ I+W  ++  YGMHG G E 
Sbjct: 399 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEA 458

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L++   M     R     P+++TF+ +  ACSH GMV +G+  F  M  DYG+ P  +HY
Sbjct: 459 LDIFDKM-----RKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 513

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           A  +DLL R G+++ A++ +  MP E   A  W +LL ACR+H NVE+ E A   L  + 
Sbjct: 514 AYAIDLLARFGRLDKAWKTVKDMPME-PTAVVWVALLSACRVHSNVELAEHALNKLVEMN 572

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
            +    Y L+SNIY++A  W     +R  MK+ G++K PGCSW++       F  GD SH
Sbjct: 573 AENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSH 632

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
             S Q++  LE+L +R++  GYVP+T+  LH+V+EEEK  LL  HSEKLA+A+G+L T P
Sbjct: 633 PLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFP 692

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G  IR+ KNLRVC DCH A  +ISKI   EI++RD  RFHHFKNG+CSCG YW
Sbjct: 693 GCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 171/596 (28%), Positives = 283/596 (47%), Gaps = 86/596 (14%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R+  + D+F  P VLKA   +     G   H  +   G+  S+V + N LV MY +CG
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFE-SNVFICNALVAMYSRCG 59

Query: 128 SDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSS--- 180
           S + +   +FD IT++   D +SWNS+++   +      AL+ F +M L  + +P++   
Sbjct: 60  S-LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 118

Query: 181 --FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAK 237
              ++V++  AC +L     +   ++VHGN++R G + + F+ NAL+  YAK G +++A 
Sbjct: 119 DIISIVNILPACGSLK---AVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAV 175

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFL-------------------------------- 265
            +F   E +D+VSWN +V+  SQ+  F                                 
Sbjct: 176 KVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRG 235

Query: 266 ---EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL-IDNSFV 321
              EA+   RQM   G  P+ V+I SVL AC+ L     G EIHAY+L+N +L +DN F 
Sbjct: 236 CSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFG 295

Query: 322 G--------SALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNEYDEEALM 371
           G        +AL+DMY  CR  +  R +FD I   ++ +  W  MI G+ Q     +AL 
Sbjct: 296 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 355

Query: 372 LFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL--GRDRYVQNALM 428
           LF++M  E  G+ PNA T+S ++ AC    A    + IH + ++         +V N L+
Sbjct: 356 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 415

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           +MYS+ G ++ ++ +FD M  +  +SW +M+TGY + G+  +AL +  +M+         
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF----- 470

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVD 547
                        P+ IT + VL  C     + +G     + +    L       +  +D
Sbjct: 471 ------------VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAID 518

Query: 548 MYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAE 599
           + A+ G L+ A +    MP+    + W  ++ A  +H      +  L  L  M AE
Sbjct: 519 LLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 574



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 233/511 (45%), Gaps = 80/511 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMT----------RSDIQPDNFAFPAVLKAVAGIQDL 93
           SW   + +  +S+    A+  + +MT          RSDI     +   +L A   ++ +
Sbjct: 81  SWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI----ISIVNILPACGSLKAV 136

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
              K++H + ++ G  L  V V N L++ Y KCG  M +  KVF+ +  KD VSWN+M+A
Sbjct: 137 PQTKEVHGNAIRNGTFLD-VFVGNALIDAYAKCGL-MENAVKVFNMMEFKDVVSWNAMVA 194

Query: 154 TLCRFGKWDLALE-----------------------------------AFRMMLYSNVEP 178
              + G +  A E                                    FR M++S   P
Sbjct: 195 GYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLP 254

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV----------GE-WNTFIMNALMAMY 227
           +  T++SV  AC++L        G ++H  SL+           GE  +  + NAL+ MY
Sbjct: 255 NCVTIISVLSACASLG---AFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311

Query: 228 AKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDG 283
           +K      A+++F     E+R++V+W  ++   +Q     +A+    +M     G+ P+ 
Sbjct: 312 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 371

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVF 342
            +I+ +L AC+HL  +  GK+IHAY LR+     ++ FV + L++MY  C +V+  R VF
Sbjct: 372 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 431

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +S K    W +M+TGYG +    EAL +F KM + AG  P+  T   V+ AC      
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK-AGFVPDDITFLVVLYACSHC-GM 489

Query: 403 PDKEGIHGHAIKLGLG---RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTM 458
            D+   +  ++    G   R  +   A+ D+ +R GR++ +     DM +  T V W  +
Sbjct: 490 VDQGLSYFDSMSADYGLTPRAEHYAYAI-DLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 548

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           ++    C  H +  +    +  + E    N+
Sbjct: 549 LSA---CRVHSNVELAEHALNKLVEMNAEND 576


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/714 (37%), Positives = 407/714 (57%), Gaps = 59/714 (8%)

Query: 202 GRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            +Q+H   L+    +   ++ L+++Y+ +  + D+  LF +      ++W +++   + +
Sbjct: 25  AQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
               +++     M   G+ PD     SVL +C+ L  L+ G+ +H Y +R  +  D  + 
Sbjct: 85  GLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD-LYT 143

Query: 322 GSALVDMYCNCREVE--------------------------------CGRRVFDFISDKK 349
           G+AL++MY   R +E                                  R++F+ + +K 
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  WN +I G  +N   EE L +  +M   A L P++ T+SSV+P    +      + IH
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGG-ANLKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G +I+ GL  D YV ++L+DMY++  R+  S  +F  +  RD +SWN++I G    G   
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD 322

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           + L   R+M                  + + KP S +  +++P C  L+ L  GK++H Y
Sbjct: 323 EGLRFFRQM-----------------LMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 365

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
             RN    ++ + S+LVDMYAKCG +  A+++FD M +R++++W  +IM   +HG+  + 
Sbjct: 366 ITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA 425

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +EL + M  EG     +KPN V F+A+  ACSH G+V E    F  M  D+GI P  +HY
Sbjct: 426 IELFEQMETEG-----IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 480

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNLFLL 708
           A V DLLGRAG++E+AY  I  M       G+ W++LL ACR+H N+++ E  A  +  +
Sbjct: 481 AAVSDLLGRAGRLEEAYDFICGM--HIGPTGSIWATLLSACRVHXNIDMAEKVANRILEV 538

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           +P+    Y+LL+NIYS+A+ W +A   R  M+ +G+RK P CSWIE  ++++ F+AGD S
Sbjct: 539 DPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDES 598

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H   E++   +E L E M KEGYVPDTS V H+V EE+K+ L+C HSE+LAI FGI+NTP
Sbjct: 599 HPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTP 658

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G TIRV KNLRVC DCH ATKFISKI  REI++RD  RFHHFKNGTCSCGDYW
Sbjct: 659 AGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 234/454 (51%), Gaps = 44/454 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R         +++ S+I M  S + PD+  FP+VLK+ A + DL+LG+ +H ++
Sbjct: 73  AWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYI 132

Query: 104 VKYGYGLSSVTVANTLVNMYGKC------------GSDMWD------------------- 132
           ++ G      T  N L+NMY K               +++D                   
Sbjct: 133 IRVGLDFDLYT-GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV-ALACS 191
           V K+F+ + EKD VSWN++IA   R G ++  L   R M  +N++P SFTL SV  L   
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           N+     +  G+++HG S+R G + + ++ ++L+ MYAK  RV D+  +F    +RD +S
Sbjct: 252 NVD----ISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+I++   QN  F E + F RQM +  IKP   S +S++PAC+HL  L  GK++H Y  
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           RN    +N F+ S+LVDMY  C  +   +++FD +  + +  W AMI G   +    +A+
Sbjct: 368 RNG-FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALM 428
            LF +M E  G+ PN     +V+ AC       D+   + +++    G    V++  A+ 
Sbjct: 427 ELFEQM-ETEGIKPNHVAFMAVLTACSHG-GLVDEAWKYFNSMTRDFGIAPGVEHYAAVS 484

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           D+  R GR+E +      M +  T S W T+++ 
Sbjct: 485 DLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 518


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 292/793 (36%), Positives = 444/793 (55%), Gaps = 42/793 (5%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H +V+K+G+  S + + NTL+N+Y + G D     K+FD + +++ V+W  +I+   + 
Sbjct: 22  FHLNVLKHGFD-SDLFLCNTLINVYVRIG-DCVSARKLFDEMPDRNGVTWACLISGYTQN 79

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGNSLRVG--E 214
           G  + A    + M++    P+ F   S   AC  S L RR G    RQVHG ++R G  +
Sbjct: 80  GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKG----RQVHGYAIRTGLND 135

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
               + N L+ MYAK G +D A+++F    D+D VSWN++++ L QN  F +AV     M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC-NCR 333
              G+ P   ++ S L +C+ L  +  G++ H   ++  + +D S V + L+ +Y    R
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS-VSNTLLALYAETSR 254

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYD-EEALMLFIKMEEVAGLWPNATTMSSV 392
             EC ++VF ++ ++    WN +I     +     EA+ +F++M   AG  PN  T  ++
Sbjct: 255 LAEC-QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMR-AGWSPNRVTFINL 312

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRD 451
           +              IH   +K  +  D  ++NAL+  Y + G +E  + IF  M E RD
Sbjct: 313 LATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRD 372

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSWN+MI+GY     H + L    ++  +  ++ +             + +  T  TVL
Sbjct: 373 EVSWNSMISGYI----HNELLCKAMDLVWLMMQRGQ-------------RLDCFTFATVL 415

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  ++ L  G E+HA AIR  L +DVV+GSALVDMY+KCG +++A R F+LMPVRN+ 
Sbjct: 416 SACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLY 475

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WN +I  Y  HG G   L L   M   G       P+ +TF+ + +ACSH G+V EG +
Sbjct: 476 SWNSMISGYARHGHGDNALRLFTRMKLSGQL-----PDHITFVGVLSACSHIGLVDEGFE 530

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-- 689
            F  M + YG+ P  +HY+C+VDLLGRAG+++     IN MP + +    W ++LGAC  
Sbjct: 531 YFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNIL-IWRTVLGACCR 589

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
              +  E+G  AA+ LF ++P  A +YVLLSN+Y+S   W+     R+ M+E  V+KE G
Sbjct: 590 GNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAG 649

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           CSW+   D +H F+AGD SH +   ++  L+ L +++R  GYVP     L+++  E KE 
Sbjct: 650 CSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEE 709

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           LL  HSEKLA+AF +L    G  IR+ KNLRVC DCH A K+ISK+  R I+LRD  RFH
Sbjct: 710 LLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFH 768

Query: 870 HFKNGTCSCGDYW 882
           HF++G CSC DYW
Sbjct: 769 HFEDGKCSCRDYW 781



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 278/545 (51%), Gaps = 42/545 (7%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSL----GKQIHAHVVKYGYGLSSVTVANTLVNM 122
           EM      P+ FAF + ++A    Q+  L    G+Q+H + ++ G   + V V N L+NM
Sbjct: 91  EMIFEGFLPNRFAFGSAIRAC---QESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINM 147

Query: 123 YGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           Y KCG D+     VF  + +KD VSWNSMI  L +   ++ A++++  M  + + PS+F 
Sbjct: 148 YAKCG-DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFA 206

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           L+S   +C++L     + LG+Q HG  +++G + +  + N L+A+YA+  R+ + + +F 
Sbjct: 207 LISALSSCASLG---CILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFS 263

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
              +RD VSWNT++ +L+ +   + EA+    +M   G  P+ V+  ++L   S L    
Sbjct: 264 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 323

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITG 359
              +IHA  L+ ++  DN+ + +AL+  Y    E+E    +F  +S+++  + WN+MI+G
Sbjct: 324 LSHQIHALILKYNVKDDNA-IENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382

Query: 360 YGQNEYDEEAL-MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           Y  NE   +A+ ++++ M+   G   +  T ++V+ AC           +H  AI+  L 
Sbjct: 383 YIHNELLCKAMDLVWLMMQR--GQRLDCFTFATVLSACATVATLECGMEVHACAIRACLE 440

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  + +AL+DMYS+ GRI+ +   F+ M VR+  SWN+MI+GY   G   +AL L   M
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LAT 537
           +                 +    P+ IT + VL  C  +  + +G E          L  
Sbjct: 501 K-----------------LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVP 543

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA----YGMHGE-GQEVLE 591
            V   S +VD+  + G L+      + MP++ N++ W  ++ A     G   E G+   E
Sbjct: 544 RVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAE 603

Query: 592 LLKNM 596
           +L NM
Sbjct: 604 MLFNM 608



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 225/427 (52%), Gaps = 24/427 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  F +A+ SY  M ++ + P NFA  + L + A +  + LG+Q H   
Sbjct: 171 SWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEG 230

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG-KWD 162
           +K G  +  V+V+NTL+ +Y +  S + +  KVF  + E+DQVSWN++I  L   G    
Sbjct: 231 IKLGLDM-DVSVSNTLLALYAET-SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVS 288

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+E F  M+ +   P+  T +++    S+LS     +L  Q+H   L+   + +  I N
Sbjct: 289 EAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS---KLSHQIHALILKYNVKDDNAIEN 345

Query: 222 ALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           AL+A Y K G +++ + +F    E RD VSWN+++S    N+   +A+  +  M  RG +
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQR 405

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D  + A+VL AC+ +  L+ G E+HA A+R   L  +  +GSALVDMY  C  ++   R
Sbjct: 406 LDCFTFATVLSACATVATLECGMEVHACAIRA-CLESDVVIGSALVDMYSKCGRIDYASR 464

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-- 398
            F+ +  + +  WN+MI+GY ++ + + AL LF +M +++G  P+  T   V+ AC    
Sbjct: 465 FFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM-KLSGQLPDHITFVGVLSACSHIG 523

Query: 399 -----SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
                 E F     ++G   ++    + Y  + ++D+  R G ++  +   + M ++ + 
Sbjct: 524 LVDEGFEYFKSMTEVYGLVPRV----EHY--SCMVDLLGRAGELDKIENFINKMPIKPNI 577

Query: 453 VSWNTMI 459
           + W T++
Sbjct: 578 LIWRTVL 584



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 24/228 (10%)

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           D    H + +K G   D ++ N L+++Y R+G    ++ +FD+M  R+ V+W  +I+GYT
Sbjct: 18  DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG-ALSALAK 522
             G   DA  +L+EM              + E  L   PN     + +  C  ++    K
Sbjct: 78  QNGMPEDACGVLKEM--------------IFEGFL---PNRFAFGSAIRACQESMLWRRK 120

Query: 523 GKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           G+++H YAIR  L    V VG+ L++MYAKCG ++ AR VF LM  ++ ++WN +I    
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            +   ++ ++   +M   G     + P+    I+  ++C+  G +  G
Sbjct: 181 QNKCFEDAVKSYNSMRKTG-----LMPSNFALISALSSCASLGCILLG 223


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 299/849 (35%), Positives = 469/849 (55%), Gaps = 48/849 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   + S    E +  Y  M +  +  +   F  V  +   ++D  LG Q+  H+
Sbjct: 914  SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 973

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            ++YG+   SV+VAN+L++M+    S     Y VFD + E D +SWN+MI+     G    
Sbjct: 974  IQYGFE-DSVSVANSLISMFSSFSSVEEACY-VFDHMNECDIISWNAMISAYAHHGLCRE 1031

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +L  F  M + + E +S TL S+       S  D L+ GR +HG  +++G + N  I N 
Sbjct: 1032 SLRCFHWMRHLHNETNSTTLSSLLSV---CSSVDNLKWGRGIHGLVVKLGLDSNVCICNT 1088

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ +Y++ GR +DA+ +F++  +RDL+SWN++++   Q+ K L+ +  L ++   G   +
Sbjct: 1089 LLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMN 1148

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAY---ALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             V+ AS L ACS+ E L   K +HA    A  +D LI    VG+ALV MY     +   +
Sbjct: 1149 HVTFASALAACSNPECLIESKIVHALIIVAGFHDFLI----VGNALVTMYGKLGMMMEAK 1204

Query: 340  RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +V   +       WNA+I G+ +NE   EA+  +  + E  G+  N  TM SV+ AC   
Sbjct: 1205 KVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE-KGIPANYITMVSVLGAC--- 1260

Query: 400  EAFPD---KEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             + PD   K G  IH H +  G   D YV+N+L+ MY++ G +  S  IFD +  +  ++
Sbjct: 1261 -SAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 1319

Query: 455  WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            WN M+      G   +AL +  EM        RN   +LD+          +    L   
Sbjct: 1320 WNAMVAANAHHGCGEEALKIFGEM--------RNVGVNLDQ---------FSFSGGLAAT 1362

Query: 515  GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
              L+ L +G+++H   I+    +D+ V +A +DMY KCG ++   ++      R+ ++WN
Sbjct: 1363 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 1422

Query: 575  VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++I A+  HG  Q+  E    M+  G      KP+ VTF++L +AC+H G+V EG+  + 
Sbjct: 1423 ILISAFARHGCFQKARETFHEMLKLGP-----KPDHVTFVSLLSACNHGGLVDEGLAYYD 1477

Query: 635  KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQ 693
             M  ++G+ P  +H  C++DLLGR+G++  A   I  MP P  D A  W SLL ACRIH 
Sbjct: 1478 SMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA--WRSLLAACRIHG 1535

Query: 694  NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
            N+E+    A++L  L+P   S YVL SN+ +++  W+   ++RK+M    ++K+P CSW+
Sbjct: 1536 NLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWV 1595

Query: 754  EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
            +  D++H F  G+  H Q+ ++   L  L +  ++ GYVPDTS  LH+++EE+KE  L  
Sbjct: 1596 KLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWN 1655

Query: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
            HSE+LA+AFG++NTP  +T+R+ KNLRVC DCH   KF+S I  R+I+LRD  RFHHF  
Sbjct: 1656 HSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSG 1715

Query: 874  GTCSCGDYW 882
            G CSCGDYW
Sbjct: 1716 GKCSCGDYW 1724



 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 326/610 (53%), Gaps = 39/610 (6%)

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSN---VEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           S I + C  G+   AL+    +L SN   ++PS +  + +   C +   +   + G  +H
Sbjct: 3   SKIQSACNLGRLAEALK----LLSSNPTRLDPSLY--LKILQLCID---KKAKKQGHLIH 53

Query: 207 GNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            + +  G  +   +N  L+  Y K+G V  A+ +F    +R +VSW  +VS  SQN +F 
Sbjct: 54  THLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFE 113

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           +A +    M   G+K +  +  S L AC+ L  LD G ++    ++    ++N FV SAL
Sbjct: 114 KAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG-CIQKGRFVENLFVKSAL 172

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VD +  C ++E    +F  + ++ +  WNAMI GY    + +++  +F  M    GL P+
Sbjct: 173 VDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLR-GGLVPD 231

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T+ SV+ A            IHG   +LG G    V   L++ Y++ G +  +K +  
Sbjct: 232 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 291

Query: 446 DMEVRDTVSWNTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
            M  +D  S   +ITGY   G +  DAL L +EM  M           +D+ +L      
Sbjct: 292 GMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN--------IGMDDVIL------ 337

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
               ++L  C  L++ A G +IHA+A++   + DV +G+AL+DMYAK G +  A+R FD 
Sbjct: 338 ---CSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 394

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  +NVI+W  +I  Y  HG G   + L K M ++G      KPN+VTF++L  ACSH+G
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKG-----FKPNDVTFLSLLFACSHTG 449

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           + +EG + F  M + Y I+P  +HY+C+VDL  R G +E+AY L+  +  + + A  W +
Sbjct: 450 LTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHN-ASLWGA 508

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           +LGA  I+  + +G+ AA NLF ++P+ + +YV+L++IYS+A LWD A  +RK M+E   
Sbjct: 509 ILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERST 568

Query: 745 RKEPGCSWIE 754
           +K  G S+ +
Sbjct: 569 KKNAGYSFFQ 578



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 265/545 (48%), Gaps = 35/545 (6%)

Query: 80   FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
            FP  LK  + I     GK +HA  +     L  +   NTL+NMY K G+     Y VFD 
Sbjct: 749  FP--LKGFSEITSQMAGKALHAFCIVGSVNLG-IFQTNTLINMYSKFGNIEHARY-VFDE 804

Query: 140  ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
            +  +++ SW++M++   R G ++ A+  F  M    VEP+ F + S+  ACS    R G 
Sbjct: 805  MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACS----RSGY 860

Query: 200  RL--GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
                G QVHG  ++ G   + ++  AL+  Y  +G V +A+ LF+   D ++VSW +++ 
Sbjct: 861  MADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMV 920

Query: 257  SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
              S +    E +   ++M   G+  +  + A+V  +C  LE    G ++  + ++     
Sbjct: 921  GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYG-FE 979

Query: 317  DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            D+  V ++L+ M+ +   VE    VFD +++  I  WNAMI+ Y  +    E+L  F  M
Sbjct: 980  DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 1039

Query: 377  EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
              +     N+TT+SS++  C   +      GIHG  +KLGL  +  + N L+ +YS  GR
Sbjct: 1040 RHLHN-ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGR 1098

Query: 437  IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
             E ++ +F  M  RD +SWN+M+  Y   G+  D L +L E+  M +  N          
Sbjct: 1099 SEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNH--------- 1149

Query: 497  VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                    +T  + L  C     L + K +HA  I       ++VG+ALV MY K G + 
Sbjct: 1150 --------VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 1201

Query: 557  FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
             A++V   MP  + +TWN +I   G H E +E  E +K       +G  +  N +T +++
Sbjct: 1202 EAKKVLQTMPQPDRVTWNALI---GGHAENEEPNEAVKAYKLIREKG--IPANYITMVSV 1256

Query: 617  FAACS 621
              ACS
Sbjct: 1257 LGACS 1261



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 174/687 (25%), Positives = 318/687 (46%), Gaps = 39/687 (5%)

Query: 40   RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQ 98
            R + SW   L    R   + EA+  + +M    ++P+ F   +++ A +    ++  G Q
Sbjct: 808  RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867

Query: 99   IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            +H  VVK G  L  V V   LV+ YG  G  +++  K+F+ + + + VSW S++      
Sbjct: 868  VHGFVVKTGI-LGDVYVGTALVHFYGSIGL-VYNAQKLFEEMPDHNVVSWTSLMVGYSDS 925

Query: 159  GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            G     L  ++ M    V  +  T  +V  +C  L  +    LG QV G+ ++ G E + 
Sbjct: 926  GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQYGFEDSV 982

Query: 218  FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
             + N+L++M++    V++A  +F    + D++SWN ++S+ + +    E++     M   
Sbjct: 983  SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042

Query: 278  GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
              + +  +++S+L  CS ++ L  G+ IH   ++   L  N  + + L+ +Y      E 
Sbjct: 1043 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRSED 1101

Query: 338  GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
               VF  ++++ +  WN+M+  Y Q+    + L +  ++ ++ G   N  T +S + AC 
Sbjct: 1102 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM-GKVMNHVTFASALAACS 1160

Query: 398  RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              E   + + +H   I  G      V NAL+ MY ++G +  +K +   M   D V+WN 
Sbjct: 1161 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 1220

Query: 458  MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
            +I G+                   EE       Y L      P  N IT+++VL  C A 
Sbjct: 1221 LIGGHA----------------ENEEPNEAVKAYKLIREKGIP-ANYITMVSVLGACSAP 1263

Query: 518  SALAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
              L K G  IHA+ +     +D  V ++L+ MYAKCG LN +  +FD +  ++ ITWN +
Sbjct: 1264 DDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAM 1323

Query: 577  IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
            + A   HG G+E L++   M     R   V  ++ +F    AA ++  ++ EG  L + +
Sbjct: 1324 VAANAHHGCGEEALKIFGEM-----RNVGVNLDQFSFSGGLAATANLAVLEEGQQL-HGL 1377

Query: 637  KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNV 695
                G E         +D+ G+ G++ D   ++ M+P   +++  +W+ L+ A   H   
Sbjct: 1378 VIKLGFESDLHVTNAAMDMYGKCGEMHD---VLKMLPQPINRSRLSWNILISAFARHGCF 1434

Query: 696  EIGEIAAQNLFLL--EPDVASHYVLLS 720
            +        +  L  +PD  +   LLS
Sbjct: 1435 QKARETFHEMLKLGPKPDHVTFVSLLS 1461



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 256/544 (47%), Gaps = 54/544 (9%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  IH H++  G+G S + +   L+  Y K G D+     VFD + E+  VSW +M++  
Sbjct: 49  GHLIHTHLITNGFG-SDLHLNTKLIIFYVKVG-DVIAARNVFDGMPERSVVSWTAMVSGY 106

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G+++ A   F  M +  V+ + FT  S   AC++L   D   +G QV G  ++ G +
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLD---MGIQVQG-CIQKGRF 162

Query: 216 --NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             N F+ +AL+  ++K G+++DA  LF +  +RD+VSWN ++   +      ++    R 
Sbjct: 163 VENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRS 222

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCN 331
           M   G+ PD  ++ SVL A +    L    +IH    +   L   S+  V   L++ Y  
Sbjct: 223 MLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQ---LGYGSYDIVTGLLINAYAK 279

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYG-QNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +   + +   +  K +    A+ITGY  +  Y  +AL LF +M ++  +  +   + 
Sbjct: 280 NGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQM-NIGMDDVILC 338

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++  C    +F     IH  A+K     D  + NAL+DMY++ G IE +K  FD+ME +
Sbjct: 339 SMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK 398

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           + +SW ++I+GY    +HG   M +   + ME +                KPN +T +++
Sbjct: 399 NVISWTSLISGYA---KHGYGHMAVSLYKKMESKG--------------FKPNDVTFLSL 441

Query: 511 LPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L  C      A+G E     ++ Y I+          S +VD++A+ G L  A  +   +
Sbjct: 442 LFACSHTGLTAEGCECFNNMVNKYNIKPRAEHY----SCMVDLFARQGLLEEAYNLLCKI 497

Query: 566 PVR-NVITWNVIIMA---YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            ++ N   W  I+ A   YG    G+E    L NM  E         N V ++ L +  S
Sbjct: 498 DIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPE---------NSVNYVVLASIYS 548

Query: 622 HSGM 625
            +G+
Sbjct: 549 AAGL 552



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 253/524 (48%), Gaps = 33/524 (6%)

Query: 202  GRQVHGNSLRVGEWN--TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
            G+ +H   + VG  N   F  N L+ MY+K G ++ A+ +F     R+  SW+T++S   
Sbjct: 763  GKALHAFCI-VGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 821

Query: 260  QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDN 318
            +   + EAV    QM   G++P+G  +AS++ ACS    M D G ++H + ++  IL D 
Sbjct: 822  RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD- 880

Query: 319  SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             +VG+ALV  Y +   V   +++F+ + D  +  W +++ GY  +    E L ++ +M +
Sbjct: 881  VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940

Query: 379  VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
              G+  N  T ++V  +C   E       + GH I+ G      V N+L+ M+S    +E
Sbjct: 941  -EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999

Query: 439  ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
             +  +FD M   D +SWN MI+ Y   G   ++L     M+++  E              
Sbjct: 1000 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE-------------- 1045

Query: 499  RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
                NS TL ++L  C ++  L  G+ IH   ++  L ++V + + L+ +Y++ G    A
Sbjct: 1046 ---TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 1102

Query: 559  RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
              VF  M  R++I+WN ++  Y   G+  + L++L  ++  G        N VTF +  A
Sbjct: 1103 ELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK-----VMNHVTFASALA 1157

Query: 619  ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            ACS+   + E   + + +    G          +V + G+ G + +A +++  M P+ D+
Sbjct: 1158 ACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM-PQPDR 1215

Query: 679  AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
               W++L+G     +N E  E       + E  + ++Y+ + ++
Sbjct: 1216 V-TWNALIGGHA--ENEEPNEAVKAYKLIREKGIPANYITMVSV 1256



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 163/363 (44%), Gaps = 25/363 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A      ++   +  M R  + PD +   +VL+A A    L +  QIH  +
Sbjct: 199 SWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGII 258

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + GYG S   V   L+N Y K GS +     +   + +KD  S  ++I      G + +
Sbjct: 259 TQLGYG-SYDIVTGLLINAYAKNGS-LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSV 316

Query: 164 -ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+ F+ M   N+      L S+   C+NL+      LG Q+H  +L+    ++  + N
Sbjct: 317 DALDLFKEMNQMNIGMDDVILCSMLNICANLAS---FALGTQIHAFALKYQPSYDVAMGN 373

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK G ++DAK  F   E+++++SW +++S  +++     AV   ++M  +G KP
Sbjct: 374 ALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKP 433

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+  S+L ACSH  +   G E     +    +   +   S +VD++     +E    +
Sbjct: 434 NDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNL 493

Query: 342 FDFISDKKIA-LWNAMITG---YGQNEYDEEALMLFIKME--------------EVAGLW 383
              I  K  A LW A++     YG     +EA      M+                AGLW
Sbjct: 494 LCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLW 553

Query: 384 PNA 386
            +A
Sbjct: 554 DDA 556



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L G   +++   GK +HA+ I   +   +   + L++MY+K G +  AR VFD M  RN 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG-MVSEG 629
            +W+ ++  Y   G  +E + L   M   G     V+PN     +L  ACS SG M  EG
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLG-----VEPNGFMVASLITACSRSGYMADEG 865

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             + +      GI         +V   G  G V +A +L   MP       +W+SL+
Sbjct: 866 FQV-HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH--NVVSWTSLM 919


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/683 (37%), Positives = 400/683 (58%), Gaps = 29/683 (4%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQ+H   L +G +++ F++  L+   +  G +  A+ +F       +  WN I+   S+N
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           + F +A++   +M L  + PD  +   +L AC  L  L  G+ +HA   R     D  FV
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEAD-VFV 156

Query: 322 GSALVDMYCNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            + L+ +Y  CR + C R VF+ +   ++ I  W A+++ Y QN    EAL +F +M ++
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + P+   + SV+ A    +       IH   +K+GL  +  +  +L  MY++ G++  
Sbjct: 217 -DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVAT 275

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +K +FD M+  + + WN MI+GY   G   DA+ L  EM N +                 
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD----------------- 318

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P++I++ + +  C  + +L + + +  Y  R+    DV + SAL+DM+AKCG +  AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VFD    R+V+ W+ +I+ YG+HG+ +E + L + M  +G     V PN+VTF+ L  A
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDG-----VHPNDVTFLGLLIA 433

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+HSGMV EG   F +M D + I P   HYAC++DLLGRAG ++ AY++I  MP +    
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQ-PGV 491

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL AC+ H++VE+G+ AAQ LF ++P    HYV LSN+Y++A+LWD+  +VR +M
Sbjct: 492 TVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           KE G+ K+ GCSW+E    +  F  GD SH + E++   +E +  R+++ G+V +    L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H++N+EE E  LC HSE++ IA+G+++TP GTT+R+ KNLR C +CH ATK ISK+  RE
Sbjct: 612 HDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGRE 671

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I++RD  RFHHFK+G CSCGDYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 257/519 (49%), Gaps = 32/519 (6%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S I  D+F + +++ +      L   +QIHA ++  G   S   +   L++     G 
Sbjct: 14  TNSGIHSDSF-YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITK-LIHASSSYG- 67

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    +VFD +       WN++I    R   +  AL  +  M  + V P SFT   +  
Sbjct: 68  DITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLK 127

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS--FED 245
           AC  LS    L++GR VH    R+G E + F+ N L+A+YAK  R+  A+T+F+     +
Sbjct: 128 ACGGLSH---LQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPE 184

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R +VSW  IVS+ +QN + +EA+    QM    +KPD V++ SVL A + L+ L+ G+ I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSI 244

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           HA  ++  +  +   + S L  MY  C +V   + +FD +    + LWNAMI+GY +N +
Sbjct: 245 HASVMKMGLETEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGF 303

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            ++A+ LF +M     + P+  +++S + AC +  +      +  +  +     D ++ +
Sbjct: 304 AKDAIDLFHEMIN-KDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS 362

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DM+++ G +E ++++FD    RD V W+ MI GY + GQ  +A+ L R M+      
Sbjct: 363 ALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME------ 416

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
            R+ V+          PN +T + +L  C     + +G         + +       + +
Sbjct: 417 -RDGVH----------PNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACI 465

Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +D+  + G L+ A  V   MPV+  V  W  ++ A   H
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 223/428 (52%), Gaps = 14/428 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R+N F++A+L Y +M  + + PD+F FP +LKA  G+  L +G+ +HA V 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKWD 162
           + G+  + V V N L+ +Y KC   +     VF+   + E+  VSW ++++   + G+  
Sbjct: 147 RLGFE-ADVFVQNGLIALYAKC-RRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPV 204

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            ALE F  M   +V+P    LVSV  A + L     L  GR +H + +++G E    ++ 
Sbjct: 205 EALEIFSQMRKMDVKPDCVALVSVLNAFTCLQ---DLEQGRSIHASVMKMGLETEPDLLI 261

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MYAK G+V  AK LF   +  +L+ WN ++S  ++N    +A+    +M  + ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +SI S + AC+ +  L+  + +  Y  R+D   D+ F+ SAL+DM+  C  VEC R V
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYR-DDVFISSALIDMFAKCGSVECARSV 380

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD   D+ + +W+AMI GYG +    EA+ L+  ME   G+ PN  T   ++ AC  S  
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER-DGVHPNDVTFLGLLIACNHSGM 439

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
             +            +   +     ++D+  R G ++ +  +   M V+  V+ W  +++
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499

Query: 461 GYTICGQH 468
               C +H
Sbjct: 500 A---CKKH 504



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 9/277 (3%)

Query: 27  TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA 86
           T    LPLP    R   SW   + + A++ +  EA+  + +M + D++PD  A  +VL A
Sbjct: 175 TVFEGLPLP---ERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNA 231

Query: 87  VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
              +QDL  G+ IHA V+K G   +   +  +L  MY KCG  +     +FD++   + +
Sbjct: 232 FTCLQDLEQGRSIHASVMKMGLE-TEPDLLISLNTMYAKCGQ-VATAKILFDKMKSPNLI 289

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQV 205
            WN+MI+   + G    A++ F  M+  +V P + ++ S   AC+ +   +  R +   V
Sbjct: 290 LWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYV 349

Query: 206 HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             +  R    + FI +AL+ M+AK G V+ A+++F    DRD+V W+ ++     + +  
Sbjct: 350 SRSDYRD---DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAR 406

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           EA+   R M   G+ P+ V+   +L AC+H  M+  G
Sbjct: 407 EAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREG 443


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 298/840 (35%), Positives = 461/840 (54%), Gaps = 43/840 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +     +++    +  ++ M  +++QP+     +V  A   + ++   K++H   
Sbjct: 265  SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            VK G+ +  V   N+L+ MY   G  M D  K+F R+  KD +SW +MI+   + G  D 
Sbjct: 325  VKRGFAID-VAFCNSLIQMYTSLGR-MGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
            ALE + +M   NV P   T+ S   AC+ L R D   +G ++H  +   G     ++ NA
Sbjct: 383  ALEVYALMELHNVNPDDVTIASALAACACLGRLD---VGIKLHELAQNKGFIRYVVVANA 439

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYAK   +D A  +FK   ++D+VSW+++++    N +  +A+ + R M L  +KP+
Sbjct: 440  LLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPN 498

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             V+  + L AC+    L +GKEIHAY LR  I     +V +AL+D+Y  C +       F
Sbjct: 499  SVTFIAALSACAATGALRSGKEIHAYVLRCGIG-SEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
               S+K +  WN M++G+  +   + AL LF +M     ++ +   M +       +   
Sbjct: 558  SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM-----MYTSLGRMGACSALAACACLG 612

Query: 403  PDKEGIHGHAIKLGLGRDRYV--QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                GI  H +    G  RYV   NAL++MY++   I+ +  +F  M  +D VSW++MI 
Sbjct: 613  RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 672

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            G+    +  DAL   R M                      KPNS+T +  L  C A  AL
Sbjct: 673  GFCFNHRSFDALYYFRYMLG------------------HVKPNSVTFIAALSACAATGAL 714

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
              GKEIHAY +R  + ++  V +AL+D+Y KCG  ++A   F +   ++V++WN+++  +
Sbjct: 715  RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 774

Query: 581  GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
              HG G   L L   MV  G       P+EVTF+ L  ACS +GMV +G +LF++  + +
Sbjct: 775  VAHGLGDIALSLFNQMVEMGEH-----PDEVTFV-LMCACSRAGMVIQGWELFHRRTEKF 828

Query: 641  GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
             I P+  HYAC+VDLL R GK+ +AY LIN MP + D A  W +LL  CRIH++VE+GE+
Sbjct: 829  SIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPD-AAVWGALLNGCRIHRHVELGEL 887

Query: 701  AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            AA+ +  LEP+  +++VLL ++Y+ A  W +   VRK M+E G+ ++ GCSW+E     H
Sbjct: 888  AAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTH 947

Query: 761  KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
             FL  D SH Q ++++  L  + ERM+  G+ P  S     V+E++   +LCGHSE+LA+
Sbjct: 948  AFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAV 1004

Query: 821  AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            AFG++NT PGTTI V KN   C  CH   K IS+I  REI +RD ++ H FK+G CSCGD
Sbjct: 1005 AFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 245/484 (50%), Gaps = 25/484 (5%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + N +++M  + G ++W  ++VF ++ E+D  SWN M+    + G  + AL+ +  ML++
Sbjct: 133 LGNAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRV 233
            + P  +T   V   C  +      R+GR+VH + LR G  +   ++NAL+ MYAK G +
Sbjct: 192 GMRPDVYTFPCVLRTCGGIP---DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F      D +SWN +++   +N +    +     M    ++P+ ++I SV  A 
Sbjct: 249 VAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L  +   KE+H +A++    ID +F  S L+ MY +   +    ++F  +  K    W
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNS-LIQMYTSLGRMGDAGKIFSRMETKDAMSW 367

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            AMI+GY +N + ++AL ++  M E+  + P+  T++S + AC           +H  A 
Sbjct: 368 TAMISGYEKNGFPDKALEVYALM-ELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
             G  R   V NAL++MY++   I+ +  +F  M  +D VSW++MI G+    +  DAL 
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALY 486

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
             R M                      KPNS+T +  L  C A  AL  GKEIHAY +R 
Sbjct: 487 YFRYMLG------------------HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            + ++  V +AL+D+Y KCG  ++A   F +   ++V++WN+++  +  HG G   L L 
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588

Query: 594 KNMV 597
             M+
Sbjct: 589 NQMM 592



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 38/234 (16%)

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC R++A     G+     +LG        NA++ M  R G I  +  +F  M  RD  S
Sbjct: 118 ACARADAEHPSFGL-----RLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN M+ GY   G   +AL L   M                      +P+  T   VL  C
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRM-----------------LWAGMRPDVYTFPCVLRTC 207

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
           G +     G+E+HA+ +R     +V V +ALV MYAKCG +  AR+VFD M + + I+WN
Sbjct: 208 GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWN 267

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
            +I  +  + E +  LEL   M+       EV+PN +T  ++  A   SGM+SE
Sbjct: 268 AMIAGHFENHECEAGLELFLTMLEN-----EVQPNLMTITSVTVA---SGMLSE 313


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/738 (38%), Positives = 424/738 (57%), Gaps = 69/738 (9%)

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYA--KLGRVDDA 236
           S TL+S   +  NL         +Q+H   ++ G  NT F ++ L+   A    G +  A
Sbjct: 35  SLTLLSTCKSFQNL---------KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYA 85

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
             LF+S E  +   WNT++   S +   + A+ F  +M L G++P+  +   +L +C+ +
Sbjct: 86  LLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKV 145

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV--------------------- 335
                GK+IH + L+  +  D  FV ++L++MY    E+                     
Sbjct: 146 GATQEGKQIHGHVLKLGLESD-PFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTAL 204

Query: 336 ----------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
                     +  RR+F+ I  +    WNAMI GY Q+   EEAL  F +M+  A + PN
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR-ANVAPN 263

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            +TM +V+ AC +S +      +       GLG +  + NAL+DMYS+ G ++ ++ +F+
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D +SWN MI GY+    + +AL L R+MQ       ++NV          +PN +
Sbjct: 324 GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ-------QSNV----------EPNDV 366

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDL 564
           T +++LP C  L AL  GK IHAY  +  L  T+  + ++L+DMYAKCG +  A++VF  
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  +++ +WN +I    MHG     LEL + M  EG      +P+++TF+ + +ACSH+G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG-----FEPDDITFVGVLSACSHAG 481

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V  G   F  M +DY I P   HY C++DLLGRAG  ++A  L+  M  + D A  W S
Sbjct: 482 LVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA-IWGS 540

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLGACR+H NVE+GE AA++LF LEP+    YVLLSNIY++A  WD    +R K+ + G+
Sbjct: 541 LLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGM 600

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
           +K PGCS IE    +H+FL GD  H+QS+ ++  L+ + + + K G+VPDTS VL++++E
Sbjct: 601 KKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDE 660

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           E KE  L  HSEKLAIAFG+++T P TTIR+ KNLRVC +CH A K ISKI +REII RD
Sbjct: 661 EWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARD 720

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHFK+G+CSC DYW
Sbjct: 721 RNRFHHFKDGSCSCMDYW 738



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 255/539 (47%), Gaps = 95/539 (17%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S+    AI  Y+ M    ++P+++ FP +LK+ A +     GKQIH HV+
Sbjct: 100 WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL 159

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMW------------------------------DVY 134
           K G   S   V  +L+NMY + G   +                              D  
Sbjct: 160 KLGLE-SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDAR 218

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++F+ I  +D VSWN+MIA   + G+++ AL  F+ M  +NV P+  T+V+V  AC   +
Sbjct: 219 RLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC---A 275

Query: 195 RRDGLRLGRQVH--------GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           +   L LG  V         G++LR       ++NAL+ MY+K G +D A+ LF+   ++
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLR-------LVNALIDMYSKCGDLDKARDLFEGICEK 328

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D++SWN ++   S  + + EA+   R+M    ++P+ V+  S+LPAC++L  LD GK IH
Sbjct: 329 DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           AY  +  + + N+ + ++L+DMY  C  +E  ++VF  +  K +  WNAMI+G   + + 
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ-- 424
             AL LF +M +  G  P+  T   V+ AC              HA  + LGR  +    
Sbjct: 449 NMALELFRQMRD-EGFEPDDITFVGVLSAC-------------SHAGLVELGRQCFSSMV 494

Query: 425 ------------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDA 471
                         ++D+  R G  + ++ +  +ME++ D   W +++     C  HG+ 
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA---CRVHGNV 551

Query: 472 LMLLREMQNMEEEKNRN--------NVYDL-----DETVLRPKPNSITLMTVLPGCGAL 517
            +     +++ E +  N        N+Y       D   +R K N   +  V PGC ++
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKV-PGCSSI 609



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 165/624 (26%), Positives = 285/624 (45%), Gaps = 108/624 (17%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL----VNMYGKCGSDMWDVYKVFD 138
           +L      Q+L   KQIH+ ++K G   +   ++  +    ++ +G     +     +F+
Sbjct: 38  LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALL----LFE 90

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            I + +Q  WN+MI           A++ +  ML   VEP+S+T   +  +C+ +     
Sbjct: 91  SIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVG---A 147

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR------------------------- 232
            + G+Q+HG+ L++G E + F+  +L+ MYA+ G                          
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 233 ------VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
                 +DDA+ LF+    RD VSWN +++  +Q+ +F EA+ F ++M    + P+  ++
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            +VL AC+    L+ G  + ++ + +  L  N  + +AL+DMY  C +++  R +F+ I 
Sbjct: 268 VTVLSACAQSGSLELGNWVRSW-IEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGIC 326

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K I  WN MI GY      +EAL LF KM++ + + PN  T  S++PAC    A    +
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQ-SNVEPNDVTFVSILPACAYLGALDLGK 385

Query: 407 GIHGHAIKLGLG-RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
            IH +  K  LG  +  +  +L+DMY++ G IE +K +F  M+ +   SWN MI+G  + 
Sbjct: 386 WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMH 445

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G    AL L R+M+              DE     +P+ IT + VL  C           
Sbjct: 446 GHANMALELFRQMR--------------DEGF---EPDDITFVGVLSACS---------- 478

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            HA                LV++  +C    F+  V D      +  +  +I   G  G 
Sbjct: 479 -HA---------------GLVELGRQC----FSSMVEDYDISPKLQHYGCMIDLLGRAGL 518

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP- 644
             E   L+KNM        E+KP+   + +L  AC   G V  G    +  K  + +EP 
Sbjct: 519 FDEAEALMKNM--------EMKPDGAIWGSLLGACRVHGNVELGE---FAAKHLFELEPE 567

Query: 645 SPDHYACVVDLLGRAGKVEDAYQL 668
           +P  Y  + ++   AG+ +D  ++
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARI 591



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 142/263 (53%), Gaps = 7/263 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S +F EA+  + EM R+++ P+      VL A A    L LG  + + +
Sbjct: 231 SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI 290

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G G S++ + N L++MY KCG D+     +F+ I EKD +SWN MI        +  
Sbjct: 291 EDHGLG-SNLRLVNALIDMYSKCG-DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMN 221
           AL  FR M  SNVEP+  T VS+  AC+ L   D   LG+ +H   +   +G  NT +  
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALD---LGKWIHAYIDKKFLGLTNTSLWT 405

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYAK G ++ AK +F   + + L SWN ++S L+ +     A+   RQM   G +P
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465

Query: 282 DGVSIASVLPACSHLEMLDTGKE 304
           D ++   VL ACSH  +++ G++
Sbjct: 466 DDITFVGVLSACSHAGLVELGRQ 488



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 7/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +  N ++EA+  + +M +S+++P++  F ++L A A +  L LGK IHA++
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K   GL++ ++  +L++MY KCG ++    +VF  +  K   SWN+MI+ L   G  ++
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCG-NIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANM 450

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-- 221
           ALE FR M     EP   T V V  ACS+      + LGRQ   + +   + +  + +  
Sbjct: 451 ALELFRQMRDEGFEPDDITFVGVLSACSHAGL---VELGRQCFSSMVEDYDISPKLQHYG 507

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
            ++ +  + G  D+A+ L K+ E + D   W +++ +
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA 544


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/749 (36%), Positives = 437/749 (58%), Gaps = 35/749 (4%)

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
            ++D VSW+++I+      K   A+ AF  ML     P+ +    V  ACSN   ++ + 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSN---KENIS 59

Query: 201 LGRQVHGNSLRVG--EWNTFIMNALMAMYAK-LGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           LG+ + G  L+ G  E +  +  AL+ M+ K  G ++ A  +F    DR++V+W  +++ 
Sbjct: 60  LGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITR 119

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             Q     +AV     M L G  PD  +++ V+ AC+ + +L  G++ H   +++ + +D
Sbjct: 120 FQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179

Query: 318 NSFVGSALVDMYCNC---REVECGRRVFDFISDKKIALWNAMITGYGQNE-YDEEALMLF 373
              VG +LVDMY  C     V+  R+VFD +    +  W A+ITGY Q+   D EA+ LF
Sbjct: 180 VC-VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELF 238

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           ++M +   + PN  T SSV+ AC         E ++   +K+ L     V N+L+ MYSR
Sbjct: 239 LEMVQ-GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSR 297

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G +E ++  FD +  ++ VS+NT++  Y       +A  L  E++              
Sbjct: 298 CGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGA------------ 345

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                    N+ T  ++L G  ++ A+ KG++IH+  +++   +++ + +AL+ MY++CG
Sbjct: 346 -----GTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  A +VF+ M   NVI+W  +I  +  HG     LE    M+  G     V PNEVT+
Sbjct: 401 NIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG-----VSPNEVTY 455

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           IA+ +ACSH G++SEG+  F  MK ++GI P  +HYACVVDLLGR+G +E+A +L+N MP
Sbjct: 456 IAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMP 515

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            + D A    + LGACR+H N+++G+ AA+ +   +P   + Y+LLSN+++SA  W++  
Sbjct: 516 FKAD-ALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVA 574

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           ++RKKMKE  + KE GCSWIE  +++HKF  GD SH Q+++++  L+ L+ ++++ GY+P
Sbjct: 575 EIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIP 634

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
            T  VLH+V EE+KE  L  HSEK+A+A+G ++T     IRV KNLRVC DCH A K+ S
Sbjct: 635 STDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFS 694

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +  +EI+LRD  RFHHFK+GTCSC DYW
Sbjct: 695 IVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 274/550 (49%), Gaps = 33/550 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A + +  EAI ++ +M      P+ + F  V +A +  +++SLGK I   +
Sbjct: 9   SWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFL 68

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GY  S V V   L++M+ K   D+   YKVFDR+ +++ V+W  MI    + G    
Sbjct: 69  LKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRD 128

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A++ F  M+ S   P  FTL  V  AC+ +     L LGRQ H   ++ G + +  +  +
Sbjct: 129 AVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL---LSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 223 LMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMAL 276
           L+ MYAK    G VDDA+ +F      +++SW  I++   Q+   D+  EA+    +M  
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDR--EAIELFLEMVQ 243

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KP+  + +SVL AC++L  +  G++++A  ++  +   N  VG++L+ MY  C  +E
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINC-VGNSLISMYSRCGNME 302

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R+ FD + +K +  +N ++  Y ++   EEA  LF ++E  AG   NA T +S++   
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG-AGTGVNAFTFASLLSGA 361

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    E IH   +K G   + ++ NAL+ MYSR G IE +  +F++M   + +SW 
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MITG+    +HG A   L     M E                  PN +T + VL  C  
Sbjct: 422 SMITGF---AKHGFATRALETFHKMLEAG--------------VSPNEVTYIAVLSACSH 464

Query: 517 LSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
           +  +++G K   +  + + +   +   + +VD+  + G L  A  + + MP + + +   
Sbjct: 465 VGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLR 524

Query: 575 VIIMAYGMHG 584
             + A  +HG
Sbjct: 525 TFLGACRVHG 534


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/714 (37%), Positives = 420/714 (58%), Gaps = 40/714 (5%)

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVH-----GNSLRVGEWNTFIMNALMAMYAKLGRV 233
           S+F  +       +L+    L    Q+H     G +LR    NT++   L A YA  G +
Sbjct: 18  STFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLR---RNTYLATKLAACYAVCGHM 74

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F     ++   WN+++   + N+    A+    +M   G KPD  +   VL AC
Sbjct: 75  PYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC 134

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L + + G+++HA  +    L ++ +VG++++ MY    +VE  R VFD +  + +  W
Sbjct: 135 GDLLLREMGRKVHALVVVGG-LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSW 193

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N M++G+ +N     A  +F  M    G   + TT+ +++ AC         + IHG+ +
Sbjct: 194 NTMMSGFVKNGEARGAFEVFGDMRR-DGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVV 252

Query: 414 KLG-LGR--DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           + G  GR  + ++ N+++DMY     +  ++ +F+ + V+D VSWN++I+GY  CG    
Sbjct: 253 RNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQ 312

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L   M                  V+   P+ +T+++VL  C  +SAL  G  + +Y 
Sbjct: 313 ALELFGRM-----------------VVVGAVPDEVTVISVLAACNQISALRLGATVQSYV 355

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           ++     +VVVG+AL+ MYA CG L  A RVFD MP +N+    V++  +G+HG G+E +
Sbjct: 356 VKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAI 415

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
            +   M+ +G     V P+E  F A+ +ACSHSG+V EG ++FYKM  DY +EP P HY+
Sbjct: 416 SIFYEMLGKG-----VTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYS 470

Query: 651 CVVDLLGRAGKVEDAYQLI-NM-MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           C+VDLLGRAG +++AY +I NM + P  D    W++LL ACR+H+NV++  I+AQ LF L
Sbjct: 471 CLVDLLGRAGYLDEAYAVIENMKLKPNED---VWTALLSACRLHRNVKLAVISAQKLFEL 527

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
            PD  S YV LSNIY++ + W+   +VR  + +  +RK P  S++E    +H+F  GD S
Sbjct: 528 NPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTS 587

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H+QS+ ++  L++L+E+++K GY PDTS VL++V EE KE +L  HSE+LA+AF ++NT 
Sbjct: 588 HEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTG 647

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PGTTIR+ KNLRVC DCH   K ISK+ +REII+RD+ RFHHF++G CSCG YW
Sbjct: 648 PGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 247/513 (48%), Gaps = 27/513 (5%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D+     +L+++   + L+   Q+HAHV   G    +  +A  L   Y  CG  M     
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGH-MPYAQH 79

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD+I  K+   WNSMI           AL  +  ML+   +P +FT   V  AC +L  
Sbjct: 80  IFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLL 139

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R+   +GR+VH   +  G E + ++ N++++MY K G V+ A+ +F     RDL SWNT+
Sbjct: 140 RE---MGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTM 196

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN-- 312
           +S   +N +   A      M   G   D  ++ ++L AC  +  L  GKEIH Y +RN  
Sbjct: 197 MSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGE 256

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
              + N F+ ++++DMYCNC  V C R++F+ +  K +  WN++I+GY +     +AL L
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALEL 316

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M  V G  P+  T+ SV+ AC +  A      +  + +K G   +  V  AL+ MY+
Sbjct: 317 FGRM-VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYA 375

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
             G +  +  +FD+M  ++  +   M+TG+ I G+  +A+ +  EM              
Sbjct: 376 NCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEM-------------- 421

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAK 551
           L + V    P+      VL  C     + +GKEI     R+  +       S LVD+  +
Sbjct: 422 LGKGV---TPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGR 478

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
            G L+ A  V + M ++ N   W  ++ A  +H
Sbjct: 479 AGYLDEAYAVIENMKLKPNEDVWTALLSACRLH 511



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 230/450 (51%), Gaps = 26/450 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +N    A+  Y++M     +PDNF +P VLKA   +    +G+++HA VV
Sbjct: 92  WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVV 151

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G     V V N++++MY K G D+     VFDR+  +D  SWN+M++   + G+   A
Sbjct: 152 VGGLE-EDVYVGNSILSMYFKFG-DVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGA 209

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIM 220
            E F  M          TL+++  AC ++     L++G+++HG  +R GE     N F+M
Sbjct: 210 FEVFGDMRRDGFVGDRTTLLALLSACGDVM---DLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N+++ MY     V  A+ LF+    +D+VSWN+++S   +     +A+    +M + G  
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD V++ SVL AC+ +  L  G  + +Y ++   ++ N  VG+AL+ MY NC  + C  R
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV-NVVVGTALIGMYANCGSLVCACR 385

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VFD + +K +     M+TG+G +    EA+ +F +M    G+ P+    ++V+ AC  S 
Sbjct: 386 VFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLG-KGVTPDEGIFTAVLSACSHSG 444

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
              +     G  I   + RD  V+      + L+D+  R G ++ +  + ++M+++ +  
Sbjct: 445 LVDE-----GKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED 499

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEE 483
            W  +++    C  H +  + +   Q + E
Sbjct: 500 VWTALLSA---CRLHRNVKLAVISAQKLFE 526



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 7/288 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ + R A   + +M R     D     A+L A   + DL +GK+IH +V
Sbjct: 192 SWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV 251

Query: 104 VKYGYG--LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           V+ G    + +  + N++++MY  C S +    K+F+ +  KD VSWNS+I+   + G  
Sbjct: 252 VRNGESGRVCNGFLMNSIIDMYCNCES-VSCARKLFEGLRVKDVVSWNSLISGYEKCGDA 310

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIM 220
             ALE F  M+     P   T++SV  AC+ +S    LRLG  V    ++ G   N  + 
Sbjct: 311 FQALELFGRMVVVGAVPDEVTVISVLAACNQIS---ALRLGATVQSYVVKRGYVVNVVVG 367

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+ MYA  G +  A  +F    +++L +   +V+    + +  EA+    +M  +G+ 
Sbjct: 368 TALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVT 427

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           PD     +VL ACSH  ++D GKEI     R+  +       S LVD+
Sbjct: 428 PDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDL 475


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/799 (34%), Positives = 447/799 (55%), Gaps = 31/799 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A++    EA+  Y +M R+ + P  +   +VL +    +  + G+ IHA  
Sbjct: 110 SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G+  S + V N ++ +Y +CGS      +VF  +  +D V++N++I+   + G  + 
Sbjct: 170 YKHGF-CSEIFVGNAVITLYLRCGS-FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
           ALE F  M +S + P   T+ S+  AC++L     L+ G Q+H    + G  + +IM  +
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLG---DLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G V+ A  +F S +  ++V WN ++ +  Q +   ++     QM   GI+P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C+    +D G++IH+ +++     D  +V   L+DMY     +E  RRV 
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD-MYVSGVLIDMYSKYGWLEKARRVL 403

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +K +  W +MI GY Q+E  ++AL  F +M++  G+WP+   ++S +  C    A 
Sbjct: 404 EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAM 462

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH      G   D  + NAL+++Y+R GRI  + + F+++E +D ++WN +++G+
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGF 522

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G H +AL +      M++   ++NV+              T ++ L     L+ + +
Sbjct: 523 AQSGLHEEALKVF---MRMDQSGVKHNVF--------------TFVSALSASANLAEIKQ 565

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+   + +  VG+AL+ +Y KCG    A+  F  M  RN ++WN II +   
Sbjct: 566 GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ 625

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M D+YGI
Sbjct: 626 HGRGLEALDLFDQMKKEG-----IKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACV+D+ GRAG+++ A + I  MP   D A  W +LL AC++H+N+E+GE AA
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD-AMVWRTLLSACKVHKNIEVGEFAA 739

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           ++L  LEP  ++ YVLLSN Y+  + W     VRK M++ GVRKEPG SWIE  + +H F
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAF 799

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  +EQ++ FL  +++R+ K GY  +   + H+  +E ++     HSEKLA+ F
Sbjct: 800 FVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTF 859

Query: 823 GILNTPPGTTIRVAKNLRV 841
           G+++ PP   +RV KNLRV
Sbjct: 860 GLMSLPPCMPLRVIKNLRV 878



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 170/600 (28%), Positives = 303/600 (50%), Gaps = 41/600 (6%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IHA  V  G G   + V N L+++Y K G  +    +VF+ ++ +D VSW +M++   +
Sbjct: 63  EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGL-VLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN- 216
            G  + AL  +R M  + V P+ + L SV  +C   ++ +    GR +H    + G  + 
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSC---TKAELFAQGRLIHAQGYKHGFCSE 177

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ NA++ +Y + G    A+ +F     RD V++NT++S  +Q      A+    +M  
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+ PD V+I+S+L AC+ L  L  G ++H+Y  +  I  D    GS L+D+Y  C +VE
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVE 296

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+      + LWN M+  +GQ     ++  LF +M + AG+ PN  T   ++  C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTC 355

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             +      E IH  ++K G   D YV   L+DMYS+ G +E ++ + + ++ +D VSW 
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415

Query: 457 TMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +MI GY    QH    DAL   +EMQ       +  ++          P++I L + + G
Sbjct: 416 SMIAGYV---QHECCKDALAAFKEMQ-------KCGIW----------PDNIGLASAISG 455

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  ++A+ +G +IHA    +  + DV + +ALV++YA+CG +  A   F+ +  ++ ITW
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++  +   G  +E L++   M   G     VK N  TF++  +A ++   + +G  + 
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSG-----VKHNVFTFVSALSASANLAEIKQGKQIH 570

Query: 634 YK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            + +K  +  E    +   ++ L G+ G  EDA    + M    +   +W++++ +C  H
Sbjct: 571 ARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNEV--SWNTIITSCSQH 626



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 227/479 (47%), Gaps = 28/479 (5%)

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC    RR   ++  ++H  ++  G     I+ N L+ +Y+K G V  A+ +F+    RD
Sbjct: 50  ACRGNGRR--WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSW  ++S  +QN    EA+   RQM   G+ P    ++SVL +C+  E+   G+ IHA
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
              ++       FVG+A++ +Y  C       RVF  +  +    +N +I+G+ Q  + E
Sbjct: 168 QGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            AL +F +M + +GL P+  T+SS++ AC           +H +  K G+  D  ++ +L
Sbjct: 227 HALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +D+Y + G +E +  IF+  +  + V WN M+  +        +  L  +MQ        
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ-------- 337

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        +PN  T   +L  C     +  G++IH+ +++    +D+ V   L+D
Sbjct: 338 ---------AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+K G L  ARRV +++  ++V++W  +I  Y  H   ++ L   K M   G     + 
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-----IW 443

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           P+ +   +  + C+    + +G+ +  ++    G       +  +V+L  R G++ +A+
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAF 501



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 43/324 (13%)

Query: 357 ITGYGQNEYDEEALMLFI-KMEEVAGLWPNATTMSSVVPACV----RSEAFPDKEGIHGH 411
           + G+  +E   + L LF  K  +  GL P     +  + AC     R +  P+   IH  
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPE---IHAK 67

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           A+  GLG+ R V N L+D+YS+ G +  ++ +F+++  RD VSW  M++GY   G   +A
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L L R+M       +R  V           P    L +VL  C      A+G+ IHA   
Sbjct: 128 LGLYRQM-------HRAGVV----------PTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++   +++ VG+A++ +Y +CG    A RVF  MP R+ +T+N +I  +   G G+  LE
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYK--MKDDYGIEPSP 646
           + + M   G     + P+ VT  +L AAC+  G + +G  L    +K  +  DY +E S 
Sbjct: 231 IFEEMQFSG-----LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS- 284

Query: 647 DHYACVVDLLGRAGKVEDAYQLIN 670
                ++DL  + G VE A  + N
Sbjct: 285 -----LLDLYVKCGDVETALVIFN 303


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/799 (34%), Positives = 447/799 (55%), Gaps = 31/799 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A++    EA+  Y +M R+ + P  +   +VL +    +  + G+ IHA  
Sbjct: 110 SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G+  S + V N ++ +Y +CGS      +VF  +  +D V++N++I+   + G  + 
Sbjct: 170 YKHGF-CSEIFVGNAVITLYLRCGS-FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
           ALE F  M +S + P   T+ S+  AC++L     L+ G Q+H    + G  + +IM  +
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLG---DLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G V+ A  +F S +  ++V WN ++ +  Q +   ++     QM   GI+P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C+    +D G++IH+ +++     D  +V   L+DMY     +E  RRV 
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD-MYVSGVLIDMYSKYGWLEKARRVL 403

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +K +  W +MI GY Q+E  ++AL  F +M++  G+WP+   ++S +  C    A 
Sbjct: 404 EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAM 462

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH      G   D  + NAL+++Y+R GRI  + + F+++E +D ++WN +++G+
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGF 522

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G H +AL +      M++   ++NV+              T ++ L     L+ + +
Sbjct: 523 AQSGLHEEALKVF---MRMDQSGVKHNVF--------------TFVSALSASANLAEIKQ 565

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+   + +  VG+AL+ +Y KCG    A+  F  M  RN ++WN II +   
Sbjct: 566 GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ 625

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M D+YGI
Sbjct: 626 HGRGLEALDLFDQMKKEG-----IKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACV+D+ GRAG+++ A + I  MP   D A  W +LL AC++H+N+E+GE AA
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD-AMVWRTLLSACKVHKNIEVGEFAA 739

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           ++L  LEP  ++ YVLLSN Y+  + W     VRK M++ GVRKEPG SWIE  + +H F
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAF 799

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  +EQ++ FL  +++R+ K GY  +   + H+  +E ++     HSEKLA+ F
Sbjct: 800 FVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTF 859

Query: 823 GILNTPPGTTIRVAKNLRV 841
           G+++ PP   +RV KNLRV
Sbjct: 860 GLMSLPPCMPLRVIKNLRV 878



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 170/600 (28%), Positives = 303/600 (50%), Gaps = 41/600 (6%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IHA  V  G G   + V N L+++Y K G  +    +VF+ ++ +D VSW +M++   +
Sbjct: 63  EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGL-VLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN- 216
            G  + AL  +R M  + V P+ + L SV  +C   ++ +    GR +H    + G  + 
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSC---TKAELFAQGRLIHAQGYKHGFCSE 177

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ NA++ +Y + G    A+ +F     RD V++NT++S  +Q      A+    +M  
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+ PD V+I+S+L AC+ L  L  G ++H+Y  +  I  D    GS L+D+Y  C +VE
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVE 296

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+      + LWN M+  +GQ     ++  LF +M + AG+ PN  T   ++  C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTC 355

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             +      E IH  ++K G   D YV   L+DMYS+ G +E ++ + + ++ +D VSW 
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415

Query: 457 TMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +MI GY    QH    DAL   +EMQ       +  ++          P++I L + + G
Sbjct: 416 SMIAGYV---QHECCKDALAAFKEMQ-------KCGIW----------PDNIGLASAISG 455

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  ++A+ +G +IHA    +  + DV + +ALV++YA+CG +  A   F+ +  ++ ITW
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++  +   G  +E L++   M   G     VK N  TF++  +A ++   + +G  + 
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSG-----VKHNVFTFVSALSASANLAEIKQGKQIH 570

Query: 634 YK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            + +K  +  E    +   ++ L G+ G  EDA    + M    +   +W++++ +C  H
Sbjct: 571 ARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNEV--SWNTIITSCSQH 626



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 227/479 (47%), Gaps = 28/479 (5%)

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC    RR   ++  ++H  ++  G     I+ N L+ +Y+K G V  A+ +F+    RD
Sbjct: 50  ACRGNGRR--WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSW  ++S  +QN    EA+   RQM   G+ P    ++SVL +C+  E+   G+ IHA
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
              ++       FVG+A++ +Y  C       RVF  +  +    +N +I+G+ Q  + E
Sbjct: 168 QGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            AL +F +M + +GL P+  T+SS++ AC           +H +  K G+  D  ++ +L
Sbjct: 227 HALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +D+Y + G +E +  IF+  +  + V WN M+  +        +  L  +MQ        
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ-------- 337

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        +PN  T   +L  C     +  G++IH+ +++    +D+ V   L+D
Sbjct: 338 ---------AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+K G L  ARRV +++  ++V++W  +I  Y  H   ++ L   K M   G     + 
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-----IW 443

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           P+ +   +  + C+    + +G+ +  ++    G       +  +V+L  R G++ +A+
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAF 501



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 43/324 (13%)

Query: 357 ITGYGQNEYDEEALMLFI-KMEEVAGLWPNATTMSSVVPACV----RSEAFPDKEGIHGH 411
           + G+  +E   + L LF  K  +  GL P     +  + AC     R +  P+   IH  
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPE---IHAK 67

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           A+  GLG+ R V N L+D+YS+ G +  ++ +F+++  RD VSW  M++GY   G   +A
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L L R+M       +R  V           P    L +VL  C      A+G+ IHA   
Sbjct: 128 LGLYRQM-------HRAGVV----------PTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++   +++ VG+A++ +Y +CG    A RVF  MP R+ +T+N +I  +   G G+  LE
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYK--MKDDYGIEPSP 646
           + + M   G     + P+ VT  +L AAC+  G + +G  L    +K  +  DY +E S 
Sbjct: 231 IFEEMQFSG-----LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS- 284

Query: 647 DHYACVVDLLGRAGKVEDAYQLIN 670
                ++DL  + G VE A  + N
Sbjct: 285 -----LLDLYVKCGDVETALVIFN 303


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 291/794 (36%), Positives = 448/794 (56%), Gaps = 44/794 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K IHA ++K      S  +A  L+ +Y   G  +     VFD+ +  +    N+MIA   
Sbjct: 64  KSIHAQIIKNWVSTESF-LAAKLIRVYSDLGF-LGHARNVFDQCSLPETAVCNAMIAGFL 121

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R  +       FRMM   ++E +S+T +    AC++L   +   +G ++   ++R G   
Sbjct: 122 RNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDE---VGMEIIRAAVRRGFHL 178

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + ++ ++++    K G + DA+ +F    ++D+V WN+I+    Q   F E++    +M 
Sbjct: 179 HLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMI 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYCN 331
             G++P  V++A++L AC    +   G   H+Y L     ND+     FV ++LVDMY N
Sbjct: 239 GGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV-----FVLTSLVDMYSN 293

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             +      VFD +  + +  WNAMI+GY QN    E+  LF ++ + +G   ++ T+ S
Sbjct: 294 LGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQ-SGSGFDSGTLVS 352

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++  C ++    +   +H   I+  L     +  A++DMYS+ G I+ +  +F  M  ++
Sbjct: 353 LIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKN 412

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W  M+ G +  G   DAL L  +MQ   EEK                 NS+TL++++
Sbjct: 413 VITWTAMLVGLSQNGYAEDALKLFCQMQ---EEK--------------VAANSVTLVSLV 455

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD-LMPVRNV 570
             C  L +L KG+ +HA+ IR+  A D V+ SAL+DMYAKCG ++ A ++F+    +++V
Sbjct: 456 HCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDV 515

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           I  N +IM YGMHG G+  L +   M+ E      +KPN+ TF++L  ACSHSG+V EG 
Sbjct: 516 ILCNSMIMGYGMHGHGRYALGVYSRMIEE-----RLKPNQTTFVSLLTACSHSGLVEEGK 570

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGA 688
            LF+ M+ D+ + P   HYAC+VDL  RAG++E+A +L+  MP  P  D      +LL  
Sbjct: 571 ALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTD---VLEALLSG 627

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR H+N  +G   A  L  L+   +  YV+LSNIY+ A+ W+    +R  M+  G++K P
Sbjct: 628 CRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIP 687

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G S IE G++++ F A D SH     ++  LENL   +  EGY+PDTSCVL +VNE  K 
Sbjct: 688 GYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKV 747

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            LL GHSE+LAIAFG+L+TP G+ I++ KNLRVC DCH  TK+ISKI  REII+RD  RF
Sbjct: 748 KLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRF 807

Query: 869 HHFKNGTCSCGDYW 882
           HHF NG CSC D+W
Sbjct: 808 HHFVNGKCSCNDFW 821



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 253/519 (48%), Gaps = 29/519 (5%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           R+ Q  E    +  M   DI+ +++     LKA   + D  +G +I    V+ G+ L  +
Sbjct: 122 RNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHL-HL 180

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            V +++VN   K G  + D  KVFD + EKD V WNS+I    + G +  +++ F  M+ 
Sbjct: 181 YVGSSMVNFLVKRGY-LADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIG 239

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGL-RLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLG 231
             + PS  T+ ++  AC     + GL ++G   H   L +G  N  F++ +L+ MY+ LG
Sbjct: 240 GGLRPSPVTMANLLKACG----QSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLG 295

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
               A  +F S   R L+SWN ++S   QN    E+    R++   G   D  ++ S++ 
Sbjct: 296 DTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIR 355

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
            CS    L+ G+ +H+  +R + L  +  + +A+VDMY  C  ++    VF  +  K + 
Sbjct: 356 GCSQTSDLENGRILHSCIIRKE-LESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVI 414

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W AM+ G  QN Y E+AL LF +M+E   +  N+ T+ S+V  C    +      +H H
Sbjct: 415 TWTAMLVGLSQNGYAEDALKLFCQMQE-EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAH 473

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF-DDMEVRDTVSWNTMITGYTICGQHGD 470
            I+ G   D  + +AL+DMY++ G+I  ++ +F ++  ++D +  N+MI GY   G HG 
Sbjct: 474 FIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGY---GMHGH 530

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAY 529
               L     M EE              R KPN  T +++L  C     + +GK + H+ 
Sbjct: 531 GRYALGVYSRMIEE--------------RLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
              + +       + LVD++++ G L  A  +   MP +
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQ 615



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 20/411 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    +   F E+I  ++EM    ++P       +LKA        +G   H++V+
Sbjct: 214 WNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 273

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G G + V V  +LV+MY   G D      VFD +  +  +SWN+MI+   + G    +
Sbjct: 274 ALGMG-NDVFVLTSLVDMYSNLG-DTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPES 331

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              FR ++ S     S TLVS+   CS  S    L  GR +H   +R   E +  +  A+
Sbjct: 332 YALFRRLVQSGSGFDSGTLVSLIRGCSQTS---DLENGRILHSCIIRKELESHLVLSTAI 388

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G +  A  +F     +++++W  ++  LSQN    +A+    QM    +  + 
Sbjct: 389 VDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANS 448

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++ S++  C+HL  L  G+ +HA+ +R+    D + + SAL+DMY  C ++    ++F+
Sbjct: 449 VTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFD-AVITSALIDMYAKCGKIHSAEKLFN 507

Query: 344 F-ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
                K + L N+MI GYG + +   AL ++ +M E   L PN TT  S++ AC  S   
Sbjct: 508 NEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIE-ERLKPNQTTFVSLLTACSHSGLV 566

Query: 403 PDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDM 447
            +     G A+   + RD  V+        L+D++SR GR+E +  +   M
Sbjct: 567 EE-----GKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQM 612



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 50/299 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   +++    +A+  + +M    +  ++    +++   A +  L+ G+ +HAH 
Sbjct: 415 TWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHF 474

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF-DRITEKDQVSWNSMIATLCRFGKWD 162
           +++GY   +V + + L++MY KCG  +    K+F +    KD +  NSMI      G   
Sbjct: 475 IRHGYAFDAV-ITSALIDMYAKCG-KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGR 532

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            AL  +  M+   ++P+  T VS+  ACS+                              
Sbjct: 533 YALGVYSRMIEERLKPNQTTFVSLLTACSH------------------------------ 562

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDL----VSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                   G V++ K LF S E D D+      +  +V   S+  +  EA   ++QM   
Sbjct: 563 -------SGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPF- 614

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +P    + ++L  C   +  + G +I    +  D L  NS +   L ++Y   R+ E
Sbjct: 615 --QPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYL--NSGIYVMLSNIYAEARKWE 669


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 385/629 (61%), Gaps = 28/629 (4%)

Query: 255  VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
            + +L  N +  EA++   +M ++G++ +     SVL  C     +  G+ +HA+ ++   
Sbjct: 452  LKTLCSNRQLKEALL---EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-C 507

Query: 315  LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                 ++ + L+ +Y  CR +   RRV D + ++ +  W AMI+GY Q  Y  EAL LF+
Sbjct: 508  YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567

Query: 375  KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            +M  ++G  PN  T ++V+ +C  S  F     IH   IK       +V ++L+DMY++ 
Sbjct: 568  EML-MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA 626

Query: 435  GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            G+I  ++ +FD +  RD VS   +I+GY   G   +AL L R +Q    E  R+N     
Sbjct: 627  GKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQ---REGMRSNY---- 679

Query: 495  ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                      +T  +VL     L+AL  G+++H++ +R  L   VV+ ++L+DMY+KCG 
Sbjct: 680  ----------VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 729

Query: 555  LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
            L ++RR+FD MP R VI+WN +++ Y  HG G+E +EL K M  E     +VKP+ VTF+
Sbjct: 730  LTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEEN----KVKPDSVTFL 785

Query: 615  ALFAACSHSGMVSEGMDLFYKMKDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            A+ + CSH GM   G+++FY+M +   G EP  +HY CVVDL GRAG+VE+A++ I  MP
Sbjct: 786  AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845

Query: 674  PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
             E   A  W SLLGACR+HQNV IGE  A+ L  +E + A +YV+LSN+Y+SA  WD   
Sbjct: 846  FE-PTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVR 904

Query: 734  DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
             VR+ MKE  V KEPG SWIE    +H F A D SH + E++   +  LS ++++ GYVP
Sbjct: 905  TVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVP 964

Query: 794  DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
            + SCVL++V++E+KE +L GHSEKLA+AFG++ TP GT +R+ KNLR+C DCH   KF+S
Sbjct: 965  ELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLS 1024

Query: 854  KIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ++  RE+ LRD  RFHH   GTCSCGDYW
Sbjct: 1025 RVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 242/487 (49%), Gaps = 26/487 (5%)

Query: 16  LSSLQTHQPPATTATSLPLPGSQTRCKESWIES----LRSEARSNQFREAILSYIEMTRS 71
           ++SL  H+P     +S+  P S+ R   S   +    L++   + Q +EA+L   EM   
Sbjct: 416 ITSLIFHRP-KQVLSSISNPFSRQRILLSTFPANSPDLKTLCSNRQLKEALL---EMGIQ 471

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
            ++ +   + +VL        +  G+++HAH++K  Y    V +   L+ +Y KC   + 
Sbjct: 472 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYE-PPVYLRTRLIVLYNKCRC-LG 529

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  +V D + E++ VSW +MI+   + G    AL  F  ML S   P+ FT  +V  +C+
Sbjct: 530 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           + S   G +LGRQ+H   ++   E + F+ ++L+ MYAK G++ +A+ +F    +RD+VS
Sbjct: 590 SSS---GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 646

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
              I+S  +Q     EA+   R++   G++ + V+ ASVL A S L  LD G+++H++ L
Sbjct: 647 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 706

Query: 311 RND----ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           R      +++ NS     L+DMY  C  +   RR+FD + ++ +  WNAM+ GY ++   
Sbjct: 707 RAKLPFYVVLQNS-----LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 761

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN- 425
            EA+ LF  M+E   + P++ T  +V+  C           I    +    G +  +++ 
Sbjct: 762 REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHY 821

Query: 426 -ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEE 483
             ++D++ R GR+E +      M    T + W +++    +         + R +  +E 
Sbjct: 822 GCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIES 881

Query: 484 EKNRNNV 490
           E   N V
Sbjct: 882 ENAGNYV 888


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/724 (37%), Positives = 420/724 (58%), Gaps = 38/724 (5%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML   V P+++T      ACS L+       GR +H +++  G + + F+  AL+ MY K
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADH---HCGRAIHRHAIHAGLQADLFVSTALLDMYVK 57

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL--RQMALRGIKPDGVSIA 287
              + DA  +F +   RDLV+WN +++  + +  +  AV  L   QM +  ++P+  ++ 
Sbjct: 58  CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDI---------LIDNSFVGSALVDMYCNCREVECG 338
           ++LP  +    L  G  +HAY +R  +         L D   +G+AL+DMY  C  +   
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           RRVFD +  +    W+A+I G+       +A +LF  M      + + T+++S + AC  
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            +     E +H    K G+  D    N+L+ MY++ G I+ +  +FD+M V+DTVS++ +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ++GY   G+  +A ++ ++MQ    E                 P++ T+++++P C  L+
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVE-----------------PDAATMVSLIPACSHLA 340

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  G+  H   I   LA++  + +AL+DMYAKCG ++ +R+VF++MP R++++WN +I 
Sbjct: 341 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 400

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            YG+HG G+E   L   M   G       P+ VTFI L +ACSHSG+V EG   F+ M  
Sbjct: 401 GYGIHGLGKEATALFLEMNNLG-----FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH 455

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            YG+ P  +HY C+VDLL R G +++AY+ I  MP   D    W +LLGACR+++N+++G
Sbjct: 456 GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD-VRVWVALLGACRVYKNIDLG 514

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           +  ++ +  L P+   ++VLLSNIYS+A  +D+A +VR   K  G +K PGCSWIE    
Sbjct: 515 KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGS 574

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+ GD SH QS +++  L+N+   ++K GY PDTS VL ++ EEEKE  L  HSEKL
Sbjct: 575 LHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKL 634

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIA+GIL+     TI V KNLRVC DCH   K IS ++ R II+RD  RFHHFKNG CSC
Sbjct: 635 AIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSC 694

Query: 879 GDYW 882
           GD+W
Sbjct: 695 GDFW 698



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 275/560 (49%), Gaps = 57/560 (10%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R  + P+N+ FP  LKA + + D   G+ IH H +  G   + + V+  L++MY KC 
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCA 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA---LEAFRMMLYSNVEPSSFTLV 184
             + D   +F  +  +D V+WN+M+A     G +  A   L + +M ++  + P++ TLV
Sbjct: 60  C-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH-RLRPNASTLV 117

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEW-----------NTFIMNALMAMYAKLGRV 233
           ++      L+++  L  G  VH   +R                  +  AL+ MYAK G +
Sbjct: 118 ALL---PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG---IKPDGVSIASVL 290
             A+ +F +   R+ V+W+ ++       +  +A +  + M  +G   + P   SIAS L
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASAL 232

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC+ L+ L  G+++HA   ++ +  D +  G++L+ MY     ++    +FD ++ K  
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             ++A+++GY QN   EEA ++F KM +   + P+A TM S++PAC    A       HG
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             I  GL  +  + NAL+DMY++ GRI++S+ +F+ M  RD VSWNTMI GY I G   +
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI---- 526
           A  L  EM N                 L   P+ +T + +L  C     + +GK      
Sbjct: 411 ATALFLEMNN-----------------LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453

Query: 527 -HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            H Y +   +   +     +VD+ ++ G L+ A      MP+R +V  W  ++ A  ++ 
Sbjct: 454 GHGYGLTPRMEHYI----CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYK 509

Query: 585 E---GQEVLELLKNMVAEGS 601
               G++V  +++ +  EG+
Sbjct: 510 NIDLGKKVSRMIQELGPEGT 529


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 291/825 (35%), Positives = 465/825 (56%), Gaps = 38/825 (4%)

Query: 67   EMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
            E+    ++P+ + F +++ A   + +  L L +Q+   V K G+ L  + V + LV+ + 
Sbjct: 272  EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF-LHDLYVGSALVSGFA 330

Query: 125  KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTL 183
            K GS  +    +F +++ ++ VS N +I  L R  + + A+E F  M  S  + P+S+ +
Sbjct: 331  KAGSIGY-AKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI 389

Query: 184  VSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFK 241
            +  A    ++   +G R G +VH   +R G  N  I   N L+ MYAK G ++DA  +F+
Sbjct: 390  ILTAFPEFHV-LENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 242  SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
              +++D V+WN++++ L QN +FLEAV   ++M    + P   ++ S L +C+ L  +  
Sbjct: 449  LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508

Query: 302  GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
            G+++H   L+  + +D S V +AL+ +Y  C  V+  ++ F  + D     WN++I    
Sbjct: 509  GEQLHCEGLKLGLDLDVS-VSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALA 567

Query: 362  QNEYDE-EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
             +E    EA+  F+ M   AG  PN  T  +++ A          + IH   +K  +  D
Sbjct: 568  DSEPSMLEAVESFLVMMR-AGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAAD 626

Query: 421  RYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQ 479
              ++NAL+  Y + G +   + IF  M  R D VSWN+MI+GY     H + L    +M 
Sbjct: 627  TAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYI----HNELLPKAMDMV 682

Query: 480  NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                +K +             + +  T  TVL  C  ++ L +G E+H  ++R  L +D+
Sbjct: 683  WFMMQKGQ-------------RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDI 729

Query: 540  VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            V+GSALVDMYAKCG +++A R F++MP RN+ +WN +I  Y  HG G + L+L   M  +
Sbjct: 730  VIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQ 789

Query: 600  GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
            G       P+ VTF+ + +ACSH+G+V+EG   F  M + YG+ P  +H++C+VDLLGR 
Sbjct: 790  GPL-----PDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRV 844

Query: 660  GKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLLEPDVASHYV 717
            G++      +N MP +      W ++LGAC R + +N  +G  AA+ L  +EP  A +Y+
Sbjct: 845  GELNKMEDFLNQMPVK-PNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYI 903

Query: 718  LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
            LLSN+Y+S   WD     R  M++  V+KE GCSW+   D +H F+AGD SH + + ++ 
Sbjct: 904  LLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYE 963

Query: 778  FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
             L+ L+ +MR  GY+P+T   L+++  E KE LL  HSEK+A+AF +L  P    IR+ K
Sbjct: 964  KLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILK 1022

Query: 838  NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            NLRVC DCH A K+IS+I  R+I+LRD  RFHHF+NG CSCGD+W
Sbjct: 1023 NLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 175/664 (26%), Positives = 312/664 (46%), Gaps = 46/664 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHA 101
           SW   +    R+    EA   + +M      P+++AF +V++A    G   L  G QIH 
Sbjct: 141 SWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHG 200

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            + K  Y ++ VT +N L++MYG     +    + FD I  ++ VS NSMI+  C+ G  
Sbjct: 201 LMSKTQY-VNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDA 259

Query: 162 DLALEAFRMM----LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-N 216
             A + F  M    +   ++P+ +T  S+  A  +L+   GL L  Q+     + G   +
Sbjct: 260 VSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA-NSGLVLLEQLLTRVEKSGFLHD 318

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMA 275
            ++ +AL++ +AK G +  AK +F+    R++VS N ++  L +  +  EAV +F+    
Sbjct: 319 LYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD 378

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGK----EIHAYALRNDILIDNSFVGSALVDMYCN 331
              + P+   I  +L A     +L+ GK    E+HA+ +R+ +L     +G+ L++MY  
Sbjct: 379 SVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAK 436

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  +     VF  + +K    WN+MITG  QN+   EA+  F +M     L+P+  TM S
Sbjct: 437 CGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE-LYPSNFTMIS 495

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
            + +C         E +H   +KLGL  D  V NAL+ +Y   G ++  +  F  M   D
Sbjct: 496 ALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYD 555

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMT 509
            VSWN++I                      + E +     +    ++R    PN +T +T
Sbjct: 556 HVSWNSLIGALA------------------DSEPSMLEAVESFLVMMRAGWDPNRVTFIT 597

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
           +L    +LS    GK+IHA  ++  +A D  + +AL+  Y KCG + +   +F  M  R 
Sbjct: 598 ILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQ 657

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + ++WN +I  Y  +    + ++++  M+ +G R      +  TF  + +AC+    +  
Sbjct: 658 DEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQR-----LDGFTFATVLSACATVATLER 712

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           GM++ +       +E      + +VD+  + G+++ A +   MMP       +W+S++  
Sbjct: 713 GMEV-HGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR--NLYSWNSMISG 769

Query: 689 CRIH 692
              H
Sbjct: 770 YARH 773



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 237/453 (52%), Gaps = 18/453 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++ QF EA+ ++ EM R+++ P NF   + L + A +  +S+G+Q+H   
Sbjct: 457 TWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEG 516

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G  L  V+V+N L+ +YG+CG  + +  K F  + + D VSWNS+I  L       L
Sbjct: 517 LKLGLDL-DVSVSNALLALYGECGY-VKECQKAFSLMLDYDHVSWNSLIGALADSEPSML 574

Query: 164 -ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMN 221
            A+E+F +M+ +  +P+  T +++  A S+LS  +   LG+Q+H   L R    +T I N
Sbjct: 575 EAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHE---LGKQIHALVLKRNVAADTAIEN 631

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           AL+A Y K G +   + +F    DR D VSWN+++S    N+   +A+  +  M  +G +
Sbjct: 632 ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQR 691

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            DG + A+VL AC+ +  L+ G E+H  ++R   L  +  +GSALVDMY  C  ++   R
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVR-ACLESDIVIGSALVDMYAKCGRIDYASR 750

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            F+ +  + +  WN+MI+GY ++ +  ++L LF +M ++ G  P+  T   V+ AC  S 
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQM-KLQGPLPDHVTFVGVLSAC--SH 807

Query: 401 AFPDKEGI-HGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV-SWN 456
           A    EG  H  ++    GL       + ++D+  R+G +   +   + M V+  V  W 
Sbjct: 808 AGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWR 867

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           T++     C  +G    L R    M  E    N
Sbjct: 868 TVLGA--CCRANGRNTALGRRAAEMLLEMEPTN 898



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 268/551 (48%), Gaps = 64/551 (11%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            +++H  + K G+ ++ + + NTL+N+Y + G D+    KVFD +  ++ VSW+ +I+  
Sbjct: 92  AEELHLQLFKNGF-VNDLFLCNTLINIYARVG-DLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            R    + A E FR M+     P+ +   SV  AC       GL+ G Q+HG   +    
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEY-GLKFGMQIHGLMSKTQYV 208

Query: 216 NTFIM-NALMAMYAK-LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           N     N L++MY   LG VD A+  F S   R+LVS N+++S   Q    + A      
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268

Query: 274 MALR----GIKPDGVSIASVLPA-CS-------HLEMLDTGKEIHAYALRNDILIDNSFV 321
           M       G+KP+  +  S++ A CS        LE L T  E   +       + + +V
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGF-------LHDLYV 321

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
           GSALV  +     +   + +F  +S + +   N +I G  + +  EEA+ LF++M++   
Sbjct: 322 GSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVE 381

Query: 382 LWPNATTMSSVVPACVRSEAFPD--------KEG--IHGHAIKLGLGRDRY-VQNALMDM 430
           L PN+          +   AFP+        ++G  +H   I+ GL   +  + N L++M
Sbjct: 382 LNPNSYM--------IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINM 433

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++ G I  +  +F  M+ +D+V+WN+MITG     Q  +A+   +EM+       R  +
Sbjct: 434 YAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMR-------RTEL 486

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           Y          P++ T+++ L  C +L  ++ G+++H   ++  L  DV V +AL+ +Y 
Sbjct: 487 Y----------PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYG 536

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           +CG +   ++ F LM   + ++WN +I A  +      +LE +++ +     G +  PN 
Sbjct: 537 ECGYVKECQKAFSLMLDYDHVSWNSLIGA--LADSEPSMLEAVESFLVMMRAGWD--PNR 592

Query: 611 VTFIALFAACS 621
           VTFI + AA S
Sbjct: 593 VTFITILAAVS 603



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 232/487 (47%), Gaps = 42/487 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N L+ +YA++G +   + +F     R+LVSW+ ++S  ++N    EA    R+M 
Sbjct: 107 DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMV 166

Query: 276 LRGIKPDGVSIASVLPACSHLEM--LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
             G  P+  +  SV+ AC       L  G +IH    +   + D +   + L+ MY N  
Sbjct: 167 SDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT-ASNVLISMYGNAL 225

Query: 334 E-VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTM 389
             V+  RR FD I  + +   N+MI+ Y Q      A  +F  M++     GL PN  T 
Sbjct: 226 GMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTF 285

Query: 390 SSVVPAC--VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            S++ A   + +      E +     K G   D YV +AL+  +++ G I  +K IF  M
Sbjct: 286 GSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKM 345

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-IT 506
             R+ VS N +I G     +  +A+ L  EM++  E                  PNS + 
Sbjct: 346 SYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVE----------------LNPNSYMI 389

Query: 507 LMTVLPGCGAL-SALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           ++T  P    L +   KG E+HA+ IR+ +L   + +G+ L++MYAKCG +N A  VF L
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  ++ +TWN +I     + +  E ++  + M     R  E+ P+  T I+  ++C+  G
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEM-----RRTELYPSNFTMISALSSCASLG 504

Query: 625 MVSEGMDLF---YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
            +S G  L     K+  D  +  S      ++ L G  G V++  +  ++M  ++D   +
Sbjct: 505 WISVGEQLHCEGLKLGLDLDVSVS----NALLALYGECGYVKECQKAFSLM-LDYDHV-S 558

Query: 682 WSSLLGA 688
           W+SL+GA
Sbjct: 559 WNSLIGA 565



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 24/229 (10%)

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           D E +H    K G   D ++ N L+++Y+R+G +   + +FD+M +R+ VSW+ +I+GYT
Sbjct: 91  DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS--ALA 521
                 +A  L R+M              + +  +   PN     +V+  C       L 
Sbjct: 151 RNRMPNEACELFRKM--------------VSDGFM---PNHYAFGSVIRACQECGEYGLK 193

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNVIIMAY 580
            G +IH    +     DV   + L+ MY    G +++ARR FD +  RN+++ N +I  Y
Sbjct: 194 FGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVY 253

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA-CS--HSGMV 626
              G+     ++   M  E   G  +KPNE TF +L +A CS  +SG+V
Sbjct: 254 CQRGDAVSAFDIFSTMQKE-VMGDGLKPNEYTFGSLISATCSLANSGLV 301



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           CG+  A    +E+H    +N    D+ + + L+++YA+ G L   R+VFD MP+RN+++W
Sbjct: 87  CGSKDA----EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW 142

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           + +I  Y  +    E  EL + MV++G       PN   F ++  AC   G
Sbjct: 143 SCLISGYTRNRMPNEACELFRKMVSDG-----FMPNHYAFGSVIRACQECG 188


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/683 (37%), Positives = 400/683 (58%), Gaps = 29/683 (4%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +Q+H   L +G +++ F++  L+   +  G +  A+ +F       +  WN I+   S+N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           + F +A++    M L  + PD  +   +L ACS L  L  G+ +HA   R     D  FV
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD-VFV 156

Query: 322 GSALVDMYCNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            + L+ +Y  CR +   R VF+ +   ++ I  W A+++ Y QN    EAL +F +M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + P+   + SV+ A    +       IH   +K+GL  +  +  +L  MY++ G++  
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +K +FD M+  + + WN MI+GY   G   +A+ +  EM N +                 
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD----------------- 318

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P++I++ + +  C  + +L + + ++ Y  R+    DV + SAL+DM+AKCG +  AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VFD    R+V+ W+ +I+ YG+HG  +E + L + M     RGG V PN+VTF+ L  A
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM----ERGG-VHPNDVTFLGLLMA 433

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+HSGMV EG   F +M D + I P   HYACV+DLLGRAG ++ AY++I  MP +    
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGV 491

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL AC+ H++VE+GE AAQ LF ++P    HYV LSN+Y++A+LWD+  +VR +M
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           KE G+ K+ GCSW+E    +  F  GD SH + E++   +E +  R+++ G+V +    L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H++N+EE E  LC HSE++AIA+G+++TP GT +R+ KNLR C +CH ATK ISK+  RE
Sbjct: 612 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 671

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I++RD  RFHHFK+G CSCGDYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 253/519 (48%), Gaps = 32/519 (6%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S I  D+F    +  A    Q     KQIHA ++  G   S   +   L++     G 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQ----LKQIHARLLVLGLQFSGFLITK-LIHASSSFG- 67

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    +VFD +       WN++I    R   +  AL  +  M  + V P SFT   +  
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS--FED 245
           ACS LS    L++GR VH    R+G + + F+ N L+A+YAK  R+  A+T+F+     +
Sbjct: 128 ACSGLSH---LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R +VSW  IVS+ +QN + +EA+    QM    +KPD V++ SVL A + L+ L  G+ I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           HA  ++  + I+   + S L  MY  C +V   + +FD +    + LWNAMI+GY +N Y
Sbjct: 245 HASVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA+ +F +M     + P+  +++S + AC +  +      ++ +  +     D ++ +
Sbjct: 304 AREAIDMFHEMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DM+++ G +E ++ +FD    RD V W+ MI GY + G+  +A+ L R M+      
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME------ 416

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
            R  V+          PN +T + +L  C     + +G         + +       + +
Sbjct: 417 -RGGVH----------PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465

Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +D+  + G L+ A  V   MPV+  V  W  ++ A   H
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 224/428 (52%), Gaps = 14/428 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R+N F++A+L Y  M  + + PD+F FP +LKA +G+  L +G+ +HA V 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKWD 162
           + G+  + V V N L+ +Y KC   +     VF+   + E+  VSW ++++   + G+  
Sbjct: 147 RLGFD-ADVFVQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            ALE F  M   +V+P    LVSV  A + L     L+ GR +H + +++G E    ++ 
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ---DLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MYAK G+V  AK LF   +  +L+ WN ++S  ++N    EA+    +M  + ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +SI S + AC+ +  L+  + ++ Y  R+D   D+ F+ SAL+DM+  C  VE  R V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGARLV 380

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD   D+ + +W+AMI GYG +    EA+ L+  ME   G+ PN  T   ++ AC  S  
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGM 439

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
             +            +   +     ++D+  R G ++ +  +   M V+  V+ W  +++
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499

Query: 461 GYTICGQH 468
               C +H
Sbjct: 500 A---CKKH 504



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 27  TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA 86
           T    LPLP    R   SW   + + A++ +  EA+  + +M + D++PD  A  +VL A
Sbjct: 175 TVFEGLPLP---ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231

Query: 87  VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
              +QDL  G+ IHA VVK G  +    +  +L  MY KCG  +     +FD++   + +
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLNTMYAKCGQ-VATAKILFDKMKSPNLI 289

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
            WN+MI+   + G    A++ F  M+  +V P + ++ S   AC+ +   +  R   +  
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 207 GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
           G S    +   FI +AL+ M+AK G V+ A+ +F    DRD+V W+ ++     + +  E
Sbjct: 350 GRSDYRDD--VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           A+   R M   G+ P+ V+   +L AC+H  M+  G
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 296/809 (36%), Positives = 460/809 (56%), Gaps = 40/809 (4%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   ++K    + D  LGKQ+HA  V+ G+    + V  +LV+MY    S + D  KVF+
Sbjct: 57  ALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVL-DGRKVFE 115

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + +++ V+W S++    + G     +  F  M    V P+ FT  SV    S ++ +  
Sbjct: 116 GMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVL---SMVASQGM 172

Query: 199 LRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           + LG+ VH  S++ G  +T F+ N+LM MYAK G V++A+ +F   E RD+VSWNT+++ 
Sbjct: 173 VDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAG 232

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L  N + LEA+                + ++V+  C++L+ L   +++H+  L++     
Sbjct: 233 LVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGF--- 289

Query: 318 NSF--VGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFI 374
           +S+  V +AL+D Y    +++    VF  +S  + +  W AMI G  QN     A  LF 
Sbjct: 290 HSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFS 349

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M E  G+ PN  T S+++   V   +FP +  IH   IK        V  ALM  YS++
Sbjct: 350 RMRE-DGVAPNDLTYSTILT--VSEASFPPQ--IHAQVIKTNYECTPTVGTALMVSYSKL 404

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
              E + +IF  ++ +D VSW+ M+T Y    Q GD                  N + + 
Sbjct: 405 CSTEEALSIFKMIDQKDVVSWSAMLTCY---AQAGDC-------------NGATNAF-IK 447

Query: 495 ETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            T+   KPN  T+ + +  C + +A +  G++ HA +I++     + V SALV MYA+ G
Sbjct: 448 MTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKG 507

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  A+ VF+    R++++WN ++  Y  HG  Q+ L++ + M  EG     +  + +TF
Sbjct: 508 SIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEG-----IDMDGLTF 562

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +++   C+H+G+V EG   F  M  DYGI P+ DHYAC+VDL  RAGK+++   LI  MP
Sbjct: 563 LSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMP 622

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
                   W +LLGACR+H+NVE+G++AA+ L  LEP  ++ YVLLSNIYS+A  W +  
Sbjct: 623 FPAGPT-IWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKD 681

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           +VRK M    VRKE GCSWI+  +++H F+A D SH  SEQ++  L  ++ ++++EGY P
Sbjct: 682 EVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCP 741

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           DTS V H+V E++KE +L  HSE+LA+AFG++ TPP   + + KNLRV  D H   K +S
Sbjct: 742 DTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVS 801

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +IE REI++RD  RFHHFK+G CSCGD+W
Sbjct: 802 EIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 261/546 (47%), Gaps = 35/546 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    ++    + +  +  M    + P+ F F +VL  VA    + LG+ +HA  
Sbjct: 124 TWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQS 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G   S+V V N+L+NMY KCG  + +   VF R+  +D VSWN+++A L   G+   
Sbjct: 184 IKFGC-CSTVFVCNSLMNMYAKCGL-VEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLE 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMN 221
           AL+ F     S    +  T  +V   C+NL     L L RQ+H + L+ G ++++  +M 
Sbjct: 242 ALQLFHDSRSSITMLTESTYSTVINLCANLKH---LGLARQLHSSVLKHG-FHSYGNVMT 297

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           ALM  Y K G++D A  +F      +++VSW  ++    QN     A     +M   G+ 
Sbjct: 298 ALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVA 357

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ ++ +++L     +       +IHA  ++ +     + VG+AL+  Y      E    
Sbjct: 358 PNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPT-VGTALMVSYSKLCSTEEALS 412

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I  K +  W+AM+T Y Q      A   FIKM  + GL PN  T+SS + AC    
Sbjct: 413 IFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKM-TMHGLKPNEFTISSAIDACASPA 471

Query: 401 AFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           A  D     H  +IK        V +AL+ MY+R G IE ++ +F+    RD +SWN+M+
Sbjct: 472 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSML 531

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           +GY    QHG +   L   + ME E       D+D          +T ++V+ GC     
Sbjct: 532 SGY---AQHGYSQKALDVFRQMEVEG-----IDMD---------GLTFLSVIMGCAHAGL 574

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVII 577
           + +G++     +R+   T  +   A +VD+Y++ G L+    + + MP     T W  ++
Sbjct: 575 VEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALL 634

Query: 578 MAYGMH 583
            A  +H
Sbjct: 635 GACRVH 640



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 200/417 (47%), Gaps = 21/417 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +TR   SW   +     + +  EA+  + +   S        +  V+   A ++ L L +
Sbjct: 219 ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLAR 278

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVSWNSMIATL 155
           Q+H+ V+K+G+  S   V   L++ Y K G      DV+ +      ++ VSW +MI   
Sbjct: 279 QLHSSVLKHGFH-SYGNVMTALMDAYNKAGQLDKALDVFLLMS--GSQNVVSWTAMIDGC 335

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            + G   LA   F  M    V P+  T  S  L  S  S         Q+H   ++   E
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTY-STILTVSEAS------FPPQIHAQVIKTNYE 388

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
               +  ALM  Y+KL   ++A ++FK  + +D+VSW+ +++  +Q      A     +M
Sbjct: 389 CTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKM 448

Query: 275 ALRGIKPDGVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            + G+KP+  +I+S + AC S    +D G++ HA ++++    D   V SALV MY    
Sbjct: 449 TMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCH-DALCVSSALVSMYARKG 507

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E  + VF+  +D+ +  WN+M++GY Q+ Y ++AL +F +M EV G+  +  T  SV+
Sbjct: 508 SIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQM-EVEGIDMDGLTFLSVI 566

Query: 394 PACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
             C  +    + +      ++   +    D Y    ++D+YSR G+++ + ++ + M
Sbjct: 567 MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYA--CMVDLYSRAGKLDETMSLIEGM 621


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/799 (34%), Positives = 447/799 (55%), Gaps = 31/799 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  L   A++    EA+  Y +M R+ + P  +   +VL +    +  + G+ IHA  
Sbjct: 110 SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G+  S + V N ++ +Y +CGS      +VF  +  +D V++N++I+   + G  + 
Sbjct: 170 YKHGF-CSEIFVGNAVITLYLRCGS-FRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEH 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
           ALE F  M +S + P   T+ S+  AC++L     L+ G Q+H    + G  + +IM  +
Sbjct: 228 ALEIFEEMQFSGLSPDCVTISSLLAACASLG---DLQKGTQLHSYLFKAGISSDYIMEGS 284

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G V+ A  +F S +  ++V WN ++ +  Q +   ++     QM   GI+P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   +L  C+    +D G++IH+ +++     D  +V   L+DMY     +E  RRV 
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD-MYVSGVLIDMYSKYGWLEKARRVL 403

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +K +  W +MI GY Q+E  ++AL  F +M++  G+WP+   ++S +  C    A 
Sbjct: 404 EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CGIWPDNIGLASAISGCAGINAM 462

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH      G   D  + NAL+++Y+R GRI  + + F++ME++D ++ N +++G+
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGF 522

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G H +AL +      M++   ++NV+              T ++ L     L+ + +
Sbjct: 523 AQSGLHEEALKVF---MRMDQSGVKHNVF--------------TFVSALSASANLAEIKQ 565

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+   + +  VG+AL+ +Y KCG    A+  F  M  RN ++WN II +   
Sbjct: 566 GKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ 625

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E L+L   M  EG     +KPN+VTFI + AACSH G+V EG+  F  M D+YGI
Sbjct: 626 HGRGLEALDLFDQMKKEG-----IKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P PDHYACV+D+ GRAG+++ A + I  MP   D A  W +LL AC++H+N+E+GE AA
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAAD-AMVWRTLLSACKVHKNIEVGEFAA 739

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           ++L  LEP  ++ YVLLSN Y+  + W     VRK M++ GVRKEPG SWIE  + +H F
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAF 799

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
             GD  H  +EQ++ FL  +++R+ K GY  +   + H+  +E ++     HSEKLA+ F
Sbjct: 800 FVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTF 859

Query: 823 GILNTPPGTTIRVAKNLRV 841
           G+++ PP   +RV KNLRV
Sbjct: 860 GLMSLPPCMPLRVIKNLRV 878



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/600 (28%), Positives = 303/600 (50%), Gaps = 41/600 (6%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +IHA  V  G G   + V N L+++Y K G  +    +VF+ ++ +D VSW +M++   +
Sbjct: 63  EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGL-VLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN- 216
            G  + AL  +R M  + V P+ + L SV  +C   ++ +    GR +H    + G  + 
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSC---TKAELFAQGRLIHAQGYKHGFCSE 177

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ NA++ +Y + G    A+ +F     RD V++NT++S  +Q      A+    +M  
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+ PD V+I+S+L AC+ L  L  G ++H+Y  +  I  D    GS L+D+Y  C +VE
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS-LLDLYVKCGDVE 296

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+      + LWN M+  +GQ     ++  LF +M + AG+ PN  T   ++  C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTC 355

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             +      E IH  ++K G   D YV   L+DMYS+ G +E ++ + + ++ +D VSW 
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415

Query: 457 TMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +MI GY    QH    DAL   +EMQ       +  ++          P++I L + + G
Sbjct: 416 SMIAGYV---QHECCKDALAAFKEMQ-------KCGIW----------PDNIGLASAISG 455

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  ++A+ +G +IHA    +  + DV + +ALV++YA+CG +  A   F+ M +++ IT 
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITG 515

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++  +   G  +E L++   M   G     VK N  TF++  +A ++   + +G  + 
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSG-----VKHNVFTFVSALSASANLAEIKQGKQIH 570

Query: 634 YK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            + +K  +  E    +   ++ L G+ G  EDA    + M    +   +W++++ +C  H
Sbjct: 571 ARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMSERNEV--SWNTIITSCSQH 626



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 228/485 (47%), Gaps = 28/485 (5%)

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC    RR   ++  ++H  ++  G     I+ N L+ +Y+K G V  A+ +F+    RD
Sbjct: 50  ACRGNGRR--WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARD 107

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
            VSW  ++S  +QN    EA+   RQM   G+ P    ++SVL +C+  E+   G+ IHA
Sbjct: 108 NVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHA 167

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
              ++       FVG+A++ +Y  C       RVF  +  +    +N +I+G+ Q  + E
Sbjct: 168 QGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            AL +F +M + +GL P+  T+SS++ AC           +H +  K G+  D  ++ +L
Sbjct: 227 HALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +D+Y + G +E +  IF+  +  + V WN M+  +        +  L  +MQ        
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQ-------- 337

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        +PN  T   +L  C     +  G++IH+ +++    +D+ V   L+D
Sbjct: 338 ---------AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+K G L  ARRV +++  ++V++W  +I  Y  H   ++ L   K M   G     + 
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-----IW 443

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ +   +  + C+    + +G+ +  ++    G       +  +V+L  R G++ +A+ 
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 668 LINMM 672
               M
Sbjct: 503 SFEEM 507



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 43/324 (13%)

Query: 357 ITGYGQNEYDEEALMLFI-KMEEVAGLWPNATTMSSVVPACV----RSEAFPDKEGIHGH 411
           + G+  +E   + L LF  K  +  GL P     +  + AC     R +  P+   IH  
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPE---IHAK 67

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           A+  GLG+ R V N L+D+YS+ G +  ++ +F+++  RD VSW  M++GY   G   +A
Sbjct: 68  AVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEA 127

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L L R+M       +R  V           P    L +VL  C      A+G+ IHA   
Sbjct: 128 LGLYRQM-------HRAGVV----------PTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++   +++ VG+A++ +Y +CG    A RVF  MP R+ +T+N +I  +   G G+  LE
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYK--MKDDYGIEPSP 646
           + + M   G     + P+ VT  +L AAC+  G + +G  L    +K  +  DY +E S 
Sbjct: 231 IFEEMQFSG-----LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS- 284

Query: 647 DHYACVVDLLGRAGKVEDAYQLIN 670
                ++DL  + G VE A  + N
Sbjct: 285 -----LLDLYVKCGDVETALVIFN 303


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 307/853 (35%), Positives = 485/853 (56%), Gaps = 44/853 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ--DLSLGKQIHA 101
           SW   +   +++   R A   +  M     +P  + F +++     +   D+ L +QI  
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMC 232

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            + K G  L+ + V + LV+ + K GS  +   KVF+++  ++ V+ N ++  L R  KW
Sbjct: 233 TIQKSGL-LTDLFVGSGLVSAFAKSGSLSY-ARKVFNQMETRNAVTLNGLMVGLVR-QKW 289

Query: 162 DLALEAFRMMLYSN----VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EW 215
               EA ++ +  N    V P S+ ++  +    +L+   GL+ GR+VHG+ +  G  ++
Sbjct: 290 --GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
              I N L+ MYAK G + DA+ +F    D+D VSWN++++ L QN  F+EAV   + M 
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              I P   ++ S L +C+ L+    G++IH  +L+  I ++ S V +AL+ +Y     +
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETGYL 466

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYD-EEALMLFIKMEEVAGLWPNATTMSSVVP 394
              R++F  + +     WN++I    ++E    EA++ F+  +  AG   N  T SSV+ 
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVLS 525

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTV 453
           A          + IHG A+K  +  +   +NAL+  Y + G ++  + IF  M E RD V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WN+MI+GY     H + L            K  + V+ + +T  R   +S    TVL  
Sbjct: 586 TWNSMISGYI----HNELL-----------AKALDLVWFMLQTGQRL--DSFMYATVLSA 628

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
             +++ L +G E+HA ++R  L +DVVVGSALVDMY+KCG L++A R F+ MPVRN  +W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  Y  HG+G+E L+L + M  +G    +  P+ VTF+ + +ACSH+G++ EG   F
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDG----QTPPDHVTFVGVLSACSHAGLLEEGFKHF 744

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH 692
             M D YG+ P  +H++C+ D+LGRAG+++     I  MP +      W ++LGAC R +
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK-PNVLIWRTVLGACCRAN 803

Query: 693 -QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
            +  E+G+ AA+ LF LEP+ A +YVLL N+Y++   W+  +  RKKMK+  V+KE G S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W+   D +H F+AGD SH  ++ ++  L+ L+ +MR  GYVP T   L+++ +E KE +L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923

Query: 812 CGHSEKLAIAFGILNTPPGTT--IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
             HSEKLA+AF +L     +T  IR+ KNLRVC DCH A K+ISKIE R+IILRD  RFH
Sbjct: 924 SYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982

Query: 870 HFKNGTCSCGDYW 882
           HF++G CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 181/662 (27%), Positives = 317/662 (47%), Gaps = 37/662 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL--GKQIHA 101
           SW   +   +R+ + +EA++   +M +  I  + +AF +VL+A   I  + +  G+QIH 
Sbjct: 69  SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG 128

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            + K  Y + +V V+N L++MY KC   +      F  I  K+ VSWNS+I+   + G  
Sbjct: 129 LMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIM 220
             A   F  M Y    P+ +T  S+     +L+  D +RL  Q+     + G   + F+ 
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQIMCTIQKSGLLTDLFVG 246

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGI 279
           + L++ +AK G +  A+ +F   E R+ V+ N ++  L +     EA  +F+   ++  +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306

Query: 280 KPDG-VSIASVLPACSHLEM--LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            P+  V + S  P  S  E   L  G+E+H + +   ++     +G+ LV+MY  C  + 
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             RRVF F++DK    WN+MITG  QN    EA+  +  M     + P + T+ S + +C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSC 425

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
              +     + IHG ++KLG+  +  V NALM +Y+  G +   + IF  M   D VSWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           ++I              L R  +++ E      V  L+      K N IT  +VL    +
Sbjct: 486 SIIGA------------LARSERSLPEAV----VCFLNAQRAGQKLNRITFSSVLSAVSS 529

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNV 575
           LS    GK+IH  A++N +A +    +AL+  Y KCG ++   ++F  M   R+ +TWN 
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589

Query: 576 IIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
           +I  Y +H E   + L+L+  M+  G R      +   +  + +A +    +  GM++ +
Sbjct: 590 MISGY-IHNELLAKALDLVWFMLQTGQR-----LDSFMYATVLSAFASVATLERGMEV-H 642

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
                  +E      + +VD+  + G+++ A +  N MP     + +W+S++     H  
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR--NSYSWNSMISGYARHGQ 700

Query: 695 VE 696
            E
Sbjct: 701 GE 702



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 272/582 (46%), Gaps = 34/582 (5%)

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V + N L+N Y + G D     KVFD +  ++ VSW  +++   R G+   AL   R M+
Sbjct: 36  VYLCNNLINAYLETG-DSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK-L 230
              +  + +  VSV  AC  +    G+  GRQ+HG   ++    +  + N L++MY K +
Sbjct: 95  KEGIFSNQYAFVSVLRACQEIGSV-GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS-V 289
           G V  A   F   E ++ VSWN+I+S  SQ      A      M   G +P   +  S V
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
             ACS  E      E     ++   L+ + FVGS LV  +     +   R+VF+ +  + 
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA-TTMSSVVPACVRSEAFPDKEG- 407
               N ++ G  + ++ EEA  LF+ M  +  + P +   + S  P    +E    K+G 
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333

Query: 408 -IHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
            +HGH I  GL      + N L++MY++ G I  ++ +F  M  +D+VSWN+MITG    
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A+   + M+       R+++           P S TL++ L  C +L     G++
Sbjct: 394 GCFIEAVERYKSMR-------RHDIL----------PGSFTLISSLSSCASLKWAKLGQQ 436

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH  +++  +  +V V +AL+ +YA+ G LN  R++F  MP  + ++WN II   G    
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII---GALAR 493

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEP 644
            +  L           R G+ K N +TF ++ +A S       G  +    +K++   E 
Sbjct: 494 SERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           + ++   ++   G+ G+++   ++ + M    D    W+S++
Sbjct: 553 TTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMI 591



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 222/484 (45%), Gaps = 39/484 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + ++ N L+  Y + G    A+ +F     R+ VSW  IVS  S+N +  EA++FLR M 
Sbjct: 35  DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDT--GKEIHAYALRNDILIDNSFVGSALVDMYCNC- 332
             GI  +  +  SVL AC  +  +    G++IH    +    +D + V + L+ MY  C 
Sbjct: 95  KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD-AVVSNVLISMYWKCI 153

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V      F  I  K    WN++I+ Y Q      A  +F  M +  G  P   T  S+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSL 212

Query: 393 V-PACVRSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           V  AC  +E  PD    E I     K GL  D +V + L+  +++ G +  ++ +F+ ME
Sbjct: 213 VTTACSLTE--PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-ITL 507
            R+ V+ N ++ G        +A  L  +M +M                +   P S + L
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM----------------IDVSPESYVIL 314

Query: 508 MTVLP--GCGALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDL 564
           ++  P         L KG+E+H + I   L   +V +G+ LV+MYAKCG +  ARRVF  
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  ++ ++WN +I     +G   E +E  K+M     R  ++ P   T I+  ++C+   
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSM-----RRHDILPGSFTLISSLSSCASLK 429

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
               G  + +      GI+ +      ++ L    G + +  ++ + M PE D+  +W+S
Sbjct: 430 WAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM-PEHDQV-SWNS 486

Query: 685 LLGA 688
           ++GA
Sbjct: 487 IIGA 490



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
            H    K  L +D Y+ N L++ Y   G    ++ +FD+M +R+ VSW  +++GY+  G+
Sbjct: 23  FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK--GKE 525
           H +AL+ LR+M              + E +     N    ++VL  C  + ++    G++
Sbjct: 83  HKEALVFLRDM--------------VKEGIF---SNQYAFVSVLRACQEIGSVGILFGRQ 125

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           IH    +   A D VV + L+ MY KC G + +A   F  + V+N ++WN II  Y   G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF-AACS 621
           + +    +  +M  +GSR     P E TF +L   ACS
Sbjct: 186 DQRSAFRIFSSMQYDGSR-----PTEYTFGSLVTTACS 218



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            H+   +N L  DV + + L++ Y + G    AR+VFD MP+RN ++W  I+  Y  +GE
Sbjct: 23  FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            +E L  L++MV EG     +  N+  F+++  AC   G V
Sbjct: 83  HKEALVFLRDMVKEG-----IFSNQYAFVSVLRACQEIGSV 118


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/736 (37%), Positives = 407/736 (55%), Gaps = 97/736 (13%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F  N +++ YAK G +D +   F     RD VSW T++       ++ +A+  + +M 
Sbjct: 79  TAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMM 138

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCN 331
             GI+P   ++ +VL + +    L+TGK++H++     LR ++ + NS     L++MY  
Sbjct: 139 REGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNS-----LLNMYAK 193

Query: 332 CREVECGRRVFDFI-------------------------------SDKKIALWNAMITGY 360
           C +    + VFD +                               +++ I  WN+MI+GY
Sbjct: 194 CGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGY 253

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            Q  YD  AL +F KM   + L P+  T++SV+ AC   E     E IH H +  G    
Sbjct: 254 NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDIS 313

Query: 421 RYVQNALMDMYSRMGRIEI---------------------------------SKTIFDDM 447
             V NAL+ MYSR G +E                                  +K IFD +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSL 373

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           + RD V+W  MI GY   G +G+A+ L R M   E+                 +PNS TL
Sbjct: 374 KDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQ-----------------RPNSYTL 416

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
             +L    +L++L  GK+IH  A+++     V V +AL+ MYAK G +  A R FDL+  
Sbjct: 417 AAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRC 476

Query: 568 -RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+ ++W  +I+A   HG  +E LEL + M+ EG R     P+ +T++ +F+AC+H+G+V
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR-----PDHITYVGVFSACTHAGLV 531

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           ++G   F  MKD   I P+  HYAC+VDL GRAG +++A + I  MP E D    W SLL
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLL 590

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
            ACR+++N+++G++AA+ L LLEP+ +  Y  L+N+YS+   W++A  +RK MK+  V+K
Sbjct: 591 SACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKK 650

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           E G SWIE   ++H F   DG H Q  +++  ++ + + ++K GYVPDT+ VLH++ EE 
Sbjct: 651 EQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEV 710

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           KE +L  HSEKLAIAFG+++TP  TT+R+ KNLRVCNDCH A KFISK+  REII+RD  
Sbjct: 711 KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTT 770

Query: 867 RFHHFKNGTCSCGDYW 882
           RFHHFK+G CSC DYW
Sbjct: 771 RFHHFKDGFCSCRDYW 786



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 239/535 (44%), Gaps = 107/535 (20%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       Q+ +AI    EM R  I+P  F    VL +VA  + L  GK++H+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G    +V+V+N+L+NMY KCG  M     VFDR+  KD  SWN+MIA   + G+ DL
Sbjct: 173 VKLGLR-GNVSVSNSLLNMYAKCGDPMM-AKVVFDRMVVKDISSWNAMIALHMQVGQMDL 230

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A+  F                                +M+  S + P  FTL SV  AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA 290

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA---------------------- 228
           NL +   L +G Q+H + +  G + +  ++NAL++MY+                      
Sbjct: 291 NLEK---LCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347

Query: 229 -----------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                      KLG +++AK +F S +DRD+V+W  ++    Q+  + EA+   R M   
Sbjct: 348 EGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGE 407

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             +P+  ++A++L   S L  L  GK+IH  A+++  +   S V +AL+ MY     +  
Sbjct: 408 EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGSITS 466

Query: 338 GRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R FD I  ++    W +MI    Q+ + EEAL LF  M  + GL P+  T   V  AC
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-LMEGLRPDHITYVGVFSAC 525

Query: 397 VRSEAFPDKEGIHGHAIKLGLGR---------DRYVQN-----ALMDMYSRMGRIEISKT 442
                         HA  +  GR         D+ +        ++D++ R G ++ ++ 
Sbjct: 526 T-------------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 443 IFDDMEVR-DTVSWNTMITGYTI-----CGQHGDALMLLREMQNMEEEKNRNNVY 491
             + M +  D V+W ++++   +      G+     +LL E +N        N+Y
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLY 627



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 251/559 (44%), Gaps = 104/559 (18%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  +HA  +     L +    NT+++ Y K G DM    + FDR+ ++D VSW +MI   
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYAKRG-DMDSSCEFFDRLPQRDSVSWTTMIVGY 121

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G++  A+     M+   +EPS FTL +V LA    +R   L  G++VH   +++G  
Sbjct: 122 KNIGQYHKAIRIMGEMMREGIEPSQFTLTNV-LASVAATR--CLETGKKVHSFIVKLGLR 178

Query: 215 WNTFIMNALMAMYAK-------------------------------LGRVDDAKTLFKSF 243
            N  + N+L+ MYAK                               +G++D A   F+  
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            +RD+V+WN+++S  +Q    L A+ MF + +    + PD  ++ASVL AC++LE L  G
Sbjct: 239 AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIG 298

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR---------------------- 340
           ++IH++ +     I +  V +AL+ MY  C  VE  RR                      
Sbjct: 299 EQIHSHIVTTGFDI-SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 341 -----------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNAT 387
                      +FD + D+ +  W AMI GY Q+    EA+ LF  M  EE     PN+ 
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR---PNSY 414

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T+++++       +    + IHG A+K G      V NAL+ MY++ G I  +   FD +
Sbjct: 415 TLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLI 474

Query: 448 EV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              RDTVSW +MI       QHG A   L   + M  E  R              P+ IT
Sbjct: 475 RCERDTVSWTSMIIA---LAQHGHAEEALELFETMLMEGLR--------------PDHIT 517

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRV 561
            + V   C     + +G++        M   D ++ +      +VD++ + G L  A+  
Sbjct: 518 YVGVFSACTHAGLVNQGRQY----FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573

Query: 562 FDLMPVR-NVITWNVIIMA 579
            + MP+  +V+TW  ++ A
Sbjct: 574 IEKMPIEPDVVTWGSLLSA 592



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 175/404 (43%), Gaps = 89/404 (22%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           R  +  N ++  Y++ G ++ S   FD +  RD+VSW TMI GY   GQ+  A+ ++ EM
Sbjct: 78  RTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEM 137

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                   R  +          +P+  TL  VL    A   L  GK++H++ ++  L  +
Sbjct: 138 M-------REGI----------EPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN 180

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPV------------------------------- 567
           V V ++L++MYAKCG    A+ VFD M V                               
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS------ 621
           R+++TWN +I  Y   G     L++   M+    R   + P+  T  ++ +AC+      
Sbjct: 241 RDIVTWNSMISGYNQRGYDLRALDMFSKML----RDSMLSPDRFTLASVLSACANLEKLC 296

Query: 622 -----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
                HS +V+ G D+        GI  +      ++ +  R G VE A +LI     + 
Sbjct: 297 IGEQIHSHIVTTGFDI-------SGIVLNA-----LISMYSRCGGVETARRLIEQRGTKD 344

Query: 677 DKAGAWSSLLGACRIHQNVEIGEI-AAQNLF--LLEPDVASHYVLLSNIYSSAQLWDKAM 733
            K   +++LL        +++G++  A+N+F  L + DV +   ++   Y    L+ +A+
Sbjct: 345 LKIEGFTALLDG-----YIKLGDMNEAKNIFDSLKDRDVVAWTAMIVG-YEQHGLYGEAI 398

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           ++ + M  +G  + P    +     +   LA  G     +Q+HG
Sbjct: 399 NLFRSM--VGEEQRPNSYTLAAMLSVASSLASLG---HGKQIHG 437



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 502 PNSITLMTVLPGCGALSALAKGKE--------IHAYAIRNMLATDVVVGSALVDMYAKCG 553
           P  ++L T+L  C  L   +  K         +H   I++ L   V + + L+++Y+K G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
               AR++FD MP+R   +WN ++ AY   G+     E    +    S         V++
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDS---------VSW 114

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             +     + G   + + +  +M  + GIEPS
Sbjct: 115 TTMIVGYKNIGQYHKAIRIMGEMMRE-GIEPS 145


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/663 (40%), Positives = 397/663 (59%), Gaps = 46/663 (6%)

Query: 237 KTLFKSFEDRDLV-SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           +++F  + D+  V SWN+I++  +++   L+A+     M    + P+  +    + +CS 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 296 LEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           L  L  GK+IH     +   +DI     FV SAL+DMY  C  +   R++FD I ++ + 
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDI-----FVASALIDMYSKCGYLNDARKLFDEIPERNVV 153

Query: 352 LWNAMITGYGQNEYDEEALMLFIKM--------EEVAGLWP--NATTMSSVVPACVRSEA 401
            W +MI+GY QNE   EA+ LF +         +E+ G+    ++  +  V+ AC R   
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCV 213

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               E +HG A+K G      V N LMD Y++ G I +S+ +FD ME  D  SWN++I  
Sbjct: 214 KSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAV 273

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G   +A  L  +M    E                 + N++TL  VL  C    AL 
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGE----------------VRYNAVTLSAVLLACAHSGALQ 317

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK IH   ++  L  ++VVG+++VDMY KCG +  AR+ FD +  +NV +W V++  YG
Sbjct: 318 IGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYG 377

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
           MHG G+E +++   M+  G     +KPN +TF+++ AACSH+G++ EG   F KMK ++ 
Sbjct: 378 MHGHGKEAMKVFYEMIRCG-----IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFD 432

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQNVEIGE 699
           +EP  +HY+C+VDLLGRAG +++AY LI  M   P+F     W SLLGACRIH+NVE+GE
Sbjct: 433 VEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFI---VWGSLLGACRIHKNVELGE 489

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
           I+A+ LF L+P    +YVLLSNIY+ A  WD    +R  MK  G+ K PG S +E    +
Sbjct: 490 ISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRV 549

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           H FL GD  H Q E+++ +L+ L+ ++++ GY+P+ + VL++V+ EEK  +L  HSEKLA
Sbjct: 550 HVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLA 609

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           +AFGI+N+ PG+ I++ KNLR+C DCH A K ISKI +REI++RD +RFHHFK+G CSCG
Sbjct: 610 VAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCG 669

Query: 880 DYW 882
           DYW
Sbjct: 670 DYW 672



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 226/432 (52%), Gaps = 24/432 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    +A+ ++  M +  + P+   FP  +K+ + + DL  GKQIH   
Sbjct: 53  SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +GYG S + VA+ L++MY KCG  + D  K+FD I E++ VSW SMI+   +  +   
Sbjct: 113 FVFGYG-SDIFVASALIDMYSKCGY-LNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170

Query: 164 ALEAFRMML------YSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGNSLRVG-E 214
           A+  F+  L      Y  +      + SV L C  S  +R     +   VHG +++ G E
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
               + N LM  YAK G +  ++ +F   E+ D+ SWN++++  +QN   +EA      M
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290

Query: 275 ALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
             RG ++ + V++++VL AC+H   L  GK IH   ++ + L DN  VG+++VDMYC C 
Sbjct: 291 VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME-LEDNLVVGTSIVDMYCKCG 349

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            VE  R+ FD +  K +  W  M+ GYG + + +EA+ +F +M    G+ PN  T  SV+
Sbjct: 350 RVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR-CGIKPNYITFVSVL 408

Query: 394 PACVRSEAFPDKEGIHGH-----AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            AC  S A   KEG H          +  G + Y  + ++D+  R G ++ +  +  +M+
Sbjct: 409 AAC--SHAGLLKEGWHWFNKMKCEFDVEPGIEHY--SCMVDLLGRAGYLKEAYGLIQEMK 464

Query: 449 VR-DTVSWNTMI 459
           V+ D + W +++
Sbjct: 465 VKPDFIVWGSLL 476



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 225/466 (48%), Gaps = 42/466 (9%)

Query: 136 VFDRITEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +F +  +K  V SWNS+IA   R G    AL AF  M   ++ P+  T      +CS+L 
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 195 RRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  G+Q+H  +   G   + F+ +AL+ MY+K G ++DA+ LF    +R++VSW +
Sbjct: 101 ---DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157

Query: 254 IVSSLSQNDKFLEAVMFLRQMAL-----------RGIKPDGVSIASVLPACSHLEMLDTG 302
           ++S   QN++  EAV   ++  L            G+  D V +  V+ AC+ + +    
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           + +H  A++         VG+ L+D Y  C E+   R+VFD + +  +  WN++I  Y Q
Sbjct: 218 ECVHGLAVKKG-FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N    EA  LF  M +   +  NA T+S+V+ AC  S A    + IH   +K+ L  +  
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V  +++DMY + GR+E+++  FD ++ ++  SW  M+ GY + G   +A+ +  EM    
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI--- 393

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
               R  +          KPN IT ++VL  C     L +G     +  +     DV  G
Sbjct: 394 ----RCGI----------KPNYITFVSVLAACSHAGLLKEGWH---WFNKMKCEFDVEPG 436

Query: 543 ----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
               S +VD+  + G L  A  +   M V+ + I W  ++ A  +H
Sbjct: 437 IEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/742 (38%), Positives = 422/742 (56%), Gaps = 39/742 (5%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSN--VEPSSFTLVS-VALACSNLSRRDGLRLGRQV 205
           N++IA   R     LA    R +L       P  FT  S +  A SN S         Q+
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS-------AAQL 89

Query: 206 HGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           H  +LR+G    + F   +L+  Y + GR+ +A  +F    +RD+ +WN ++S L +N +
Sbjct: 90  HACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNAR 149

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EAV    +M   G+  D V+++SVLP C  L        +H YA+++  L    FV +
Sbjct: 150 AAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHG-LDKELFVCN 208

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           AL+D+Y     +E  + VF  +  + +  WN++I+G  Q      AL +F  M   +G+ 
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRG-SGVS 267

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ-NALMDMYSRMGRIEISKT 442
           P+  T+ S+  A  +       + +H + ++ G   D  +  NA++DMY+++  IE ++ 
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD M V+D+VSWNT+ITGY   G   +A+     MQ  E  K                 
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQG------------- 374

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
              T ++VLP    L AL +G  +HA +I+  L  DV VG+ L+D+YAKCG L  A  +F
Sbjct: 375 ---TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLF 431

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           + MP R+   WN II   G+HG G E L L   M  EG     +KP+ VTF++L AACSH
Sbjct: 432 EKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG-----IKPDHVTFVSLLAACSH 486

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           +G+V +G   F  M+  Y I P   HYAC+ D+LGRAG++++A+  I  MP + D A  W
Sbjct: 487 AGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA-VW 545

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            +LLGACRIH NVE+G++A+QNLF L+P+   +YVL+SN+Y+    WD   +VR  ++  
Sbjct: 546 GALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 605

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGS--HQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
            ++K PG S IE    ++ F +G+ +  H Q E++   L +L  ++R  GYV D S VL 
Sbjct: 606 NLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQ 665

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V ++EKE +L  HSE+LAIAFGI+NTP  T + + KNLRVC DCH ATK+IS+I  REI
Sbjct: 666 DVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREI 725

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           I+RD  RFHHFK+G CSCGD+W
Sbjct: 726 IVRDSNRFHHFKDGHCSCGDFW 747



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 262/533 (49%), Gaps = 41/533 (7%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +L +I       +PD F FP++++A       +   Q+HA  ++ G    SV  + +LV+
Sbjct: 55  LLRHILSCAYPFRPDGFTFPSLIRAAPSNASAA---QLHACALRLGLVRPSVFTSGSLVH 111

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
            Y + G  + + YKVFD ++E+D  +WN+M++ LCR  +   A+  F  M+   V   + 
Sbjct: 112 AYLRFGR-ISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTV 170

Query: 182 TLVSVALACSNLSRRDGLRLGRQV-----HGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
           T+ SV   C        + LG QV     H  +++ G +   F+ NAL+ +Y KLG +++
Sbjct: 171 TVSSVLPMC--------VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F   E RDLV+WN+I+S   Q  +   A+   + M   G+ PD +++ S+  A + 
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
                + K +H Y +R    +D+   G+A+VDMY     +E  +R+FD +  +    WN 
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +ITGY QN    EA+  +  M++  GL     T  SV+PA     A      +H  +IK+
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL  D YV   L+D+Y++ G++  +  +F+ M  R T  WN +I+G  + G   +AL L 
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             MQ               E +   KP+ +T +++L  C     + +G+    + +  + 
Sbjct: 463 SRMQQ--------------EGI---KPDHVTFVSLLAACSHAGLVDQGRSF--FDVMQVT 503

Query: 536 ATDVVVG---SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
              V +    + + DM  + G L+ A      MP++ +   W  ++ A  +HG
Sbjct: 504 YDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 221/459 (48%), Gaps = 27/459 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    R+ +  EA+  +  M    +  D     +VL     + D  L   +H + 
Sbjct: 136 AWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYA 195

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G     + V N L+++YGK G  + +   VF  +  +D V+WNS+I+   + G+   
Sbjct: 196 VKHGLD-KELFVCNALIDVYGKLGM-LEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAA 253

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT---FIM 220
           AL+ F+ M  S V P   TLVS+A A +     DG R  + +H   +R G W+       
Sbjct: 254 ALKMFQGMRGSGVSPDVLTLVSLASAIAQGG--DG-RSAKSLHCYVMRRG-WDVDDIIAG 309

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GI 279
           NA++ MYAKL  ++ A+ +F S   +D VSWNT+++   QN    EAV     M    G+
Sbjct: 310 NAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGL 369

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           K    +  SVLPA SHL  L  G  +HA +++  + +D  +VG+ L+D+Y  C ++    
Sbjct: 370 KAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVD-VYVGTCLIDLYAKCGKLAEAM 428

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F+ +  +    WNA+I+G G + +  EAL LF +M++  G+ P+  T  S++ AC  +
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ-EGIKPDHVTFVSLLAACSHA 487

Query: 400 ------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
                  +F D   +    + +      Y    + DM  R G+++ +     +M ++ D+
Sbjct: 488 GLVDQGRSFFDVMQVTYDIVPIA---KHYA--CMADMLGRAGQLDEAFNFIQNMPIKPDS 542

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
             W  ++     C  HG+  M     QN+ E    N  Y
Sbjct: 543 AVWGALLGA---CRIHGNVEMGKVASQNLFELDPENVGY 578



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 158/328 (48%), Gaps = 13/328 (3%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   +W   +    +  Q   A+  +  M  S + PD     ++  A+A   D   
Sbjct: 229 GMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRS 288

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K +H +V++ G+ +  +   N +V+MY K  S++    ++FD +  +D VSWN++I   
Sbjct: 289 AKSLHCYVMRRGWDVDDIIAGNAIVDMYAKL-SNIEAAQRMFDSMPVQDSVSWNTLITGY 347

Query: 156 CRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
            + G  + A+E +  M  +  ++    T VSV  A S+L     L+ G ++H  S+++G 
Sbjct: 348 MQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG---ALQQGMRMHALSIKIGL 404

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             + ++   L+ +YAK G++ +A  LF+    R    WN I+S L  +    EA+    +
Sbjct: 405 NVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSR 464

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   GIKPD V+  S+L ACSH  ++D G+           ++  +   + + DM     
Sbjct: 465 MQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAG 524

Query: 334 EVECGRRVFDFISDKKI----ALWNAMI 357
           +++     F+FI +  I    A+W A++
Sbjct: 525 QLD---EAFNFIQNMPIKPDSAVWGALL 549


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/768 (36%), Positives = 427/768 (55%), Gaps = 59/768 (7%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT++  Y   G  + +  K+F     +  ++W+S+I+  CR+G    ALE F  M Y   
Sbjct: 76  NTMIGAYANSGR-LNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
            P+ FT  SV   CS       L  G+Q+H ++++   + N F++  L+ MYAK   + +
Sbjct: 135 RPNQFTWGSVLRVCSMYVL---LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE 191

Query: 236 AKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           A+ LF+   D R+ V W  +V+  SQN    +A+   R M   GI+ +  +  S+L AC 
Sbjct: 192 AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACG 251

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            +     G ++H   +R+     N FVGSALVDMY  C ++   RR+ + +       WN
Sbjct: 252 SISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           +MI G  +    EEAL LF ++  +  +  +  T  SV+          +   +H   +K
Sbjct: 311 SMIVGCVRQGLGEEALSLF-RIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVK 369

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            G    + V NAL+DMY++ G  + +  +F+ M  +D +SW +++TG    G + +AL L
Sbjct: 370 TGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 429

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EM+                 ++   P+ I +  VL  C  L+ L  GK++HA  +++ 
Sbjct: 430 FCEMR-----------------IMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG 472

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           L + + V ++LV MYAKCGC+  A +VFD M +++VITW  +I+ Y  +G G++      
Sbjct: 473 LGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------ 526

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
                                      H+G+V  G   F  M++ YGI+P P+HYAC++D
Sbjct: 527 ---------------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMID 559

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGR+GK+ +A +L+N M  + D A  W +LL ACR+H NVE+GE AA NLF LEP  A 
Sbjct: 560 LLGRSGKLMEAKELLNQMAVQPD-ATVWKALLAACRVHGNVELGERAANNLFELEPKNAV 618

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLLSN+YS+A  W++A   R+ MK  GV KEPGCSWIE   ++H+F++ D SH ++ +
Sbjct: 619 PYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAE 678

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  ++ +   +++ GYVPD +  LH+++EE KE  L  HSEKLA+AFG+L  PPG  IR
Sbjct: 679 IYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIR 738

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR+C DCH A K++S +  R +ILRD   FHHF+ G CSC DYW
Sbjct: 739 IFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 266/568 (46%), Gaps = 36/568 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    R     EA+  + EM     +P+ F + +VL+  +    L  GKQIHAH 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  +  S+  V   LV+MY KC   +   Y       +++ V W +M+    + G    
Sbjct: 165 IKTQFD-SNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+E FR M    +E + FT  S+  AC ++S       G QVHG  +R G   N F+ +A
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSIS---ACGFGAQVHGCIVRSGFGANVFVGSA 280

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K G + +A+ + ++ E  D VSWN+++    +     EA+   R M LR +K D
Sbjct: 281 LVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKID 340

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SVL   S +  +     +H+  ++         V +ALVDMY      +    VF
Sbjct: 341 EFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEA-YKLVNNALVDMYAKRGYFDYAFDVF 399

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + ++DK +  W +++TG   N   EEAL LF +M  + G+ P+   +++V+ AC      
Sbjct: 400 EKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIMGIHPDQIVIAAVLSACAELTVL 458

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +H + +K GLG    V N+L+ MY++ G IE +  +FD ME++D ++W  +I GY
Sbjct: 459 EFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGY 518

Query: 463 TICGQHGDALMLLRE----MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
              G+  D   L+       Q+MEE      VY      ++P P     M  L G     
Sbjct: 519 AQNGRGRDHAGLVEHGRSYFQSMEE------VYG-----IKPGPEHYACMIDLLG----- 562

Query: 519 ALAKGKEIHAYAIRNMLAT--DVVVGSALVDMYAKCGCLNFARR----VFDLMPVRNVIT 572
               GK + A  + N +A   D  V  AL+      G +    R    +F+L P +N + 
Sbjct: 563 --RSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP-KNAVP 619

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           + ++   Y   G+ +E  +  + M   G
Sbjct: 620 YVLLSNLYSAAGKWEEAAKTRRLMKLRG 647



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 264/570 (46%), Gaps = 75/570 (13%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF---------------- 264
           N +++  +K GRVDDA+ LF    DRD  SWNT++ + + + +                 
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 265 ---------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
                          +EA+    +M   G +P+  +  SVL  CS   +L+ GK+IHA+A
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK-IALWNAMITGYGQNEYDEE 368
           ++      N+FV + LVDMY  C+ +     +F+   DK+   LW AM+TGY QN    +
Sbjct: 165 IKTQ-FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A+  F  M    G+  N  T  S++ AC    A      +HG  ++ G G + +V +AL+
Sbjct: 224 AIECFRDMRG-EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALV 282

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMYS+ G +  ++ + + MEV D VSWN+MI G    G   +AL L R M          
Sbjct: 283 DMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMH--------- 333

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                   +   K +  T  +VL     +  +     +H+  ++       +V +ALVDM
Sbjct: 334 --------LRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDM 385

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAK G  ++A  VF+ M  ++VI+W  ++     +G  +E L L   M   G     + P
Sbjct: 386 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG-----IHP 440

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           +++   A+ +AC+   ++  G  +    +K   G   S D+   +V +  + G +EDA +
Sbjct: 441 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIEDANK 498

Query: 668 LINMMPPEFDKAGAWSSLL------GACRIHQN-VEIGEIAAQNL---FLLEPDVASHYV 717
           + + M  E      W++L+      G  R H   VE G    Q++   + ++P    HY 
Sbjct: 499 VFDSM--EIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPG-PEHYA 555

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
            + ++   +    K M+ ++ + +M V+ +
Sbjct: 556 CMIDLLGRS---GKLMEAKELLNQMAVQPD 582



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 20/263 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  + EA+  + EM    I PD     AVL A A +  L  GKQ+HA+ 
Sbjct: 409 SWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANF 468

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-D 162
           +K G G SS++V N+LV+MY KCG  + D  KVFD +  +D ++W ++I    + G+  D
Sbjct: 469 LKSGLG-SSLSVDNSLVSMYAKCGC-IEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD 526

Query: 163 LA--LEAFRMMLYSNVEPSSFTLVSVALACS-NLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
            A  +E  R    S  E           AC  +L  R G  +  +   N + V + +  +
Sbjct: 527 HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAV-QPDATV 585

Query: 220 MNALMAMYAKLGRVD----DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             AL+A     G V+     A  LF+  E ++ V +  + +  S   K+ EA    R M 
Sbjct: 586 WKALLAACRVHGNVELGERAANNLFE-LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 644

Query: 276 LRGIKPDGVSIASVLPACSHLEM 298
           LRG+  +        P CS +EM
Sbjct: 645 LRGVSKE--------PGCSWIEM 659


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 290/842 (34%), Positives = 451/842 (53%), Gaps = 37/842 (4%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFRE 60
           + +S   L+++ S  L S         ++ S+    S T     W   +R+   +  F +
Sbjct: 45  IITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQ 104

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  Y EM    +QPD F FP+V+ + A I DL LG  +H H ++ G+  S + + N L+
Sbjct: 105 ALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE-SDLYIGNALI 163

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           +MY +   D+ +   VF+ ++ +D VSWNS+I+  C  G W+ AL+ +     + + P  
Sbjct: 164 DMYSRF-VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDC 222

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           FT+ SV LAC +L     ++ G  VHG   ++G   +  I N L++MY K  R+ +A+ +
Sbjct: 223 FTMSSVLLACGSLM---AVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F     +D V+WNT++   +Q  +   +V     M + G  PD +SI S + AC     L
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDL 338

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             GK +H Y + +    D +   + L+DMY  C ++   + VFD    K    WN++I G
Sbjct: 339 QVGKFVHKYLIGSGFECD-TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 360 YGQNEYDEEALMLF--IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           Y Q+ Y +E L  F  +KME      P++ T   ++    +        GIH   IK G 
Sbjct: 398 YTQSGYYKEGLESFKMMKMERK----PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             +  + N+L+D+Y++ G ++    +F  M   D +SWNT+I              ++ E
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M+               E ++   P+  T++ +LP C  L+   +GKEIH Y  ++   +
Sbjct: 514 MRT--------------EGLM---PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFES 556

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +V +G+AL++MY+KCG L    +VF  M  ++V+TW  +I A+GM+GEG++ L+  ++M 
Sbjct: 557 NVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDME 616

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G     V P+ V FIA   ACSHSGMV EG+  F +MK DY +EP  +HYACVVDLL 
Sbjct: 617 LSG-----VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLA 671

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           R+G +  A + I  MP + D A  W +LL ACR   N  I +  ++ +  L  D   +YV
Sbjct: 672 RSGLLAQAEEFILSMPMKPD-ASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYV 730

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           L+SNIY++   WD+   VR  MK  G++KEPG SWIE    ++ F  GD S +Q +++  
Sbjct: 731 LVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKD 790

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            LE L   M KEGYV D    LH+V E++K  +LCGHSE+LAIAFG+LNT PG+ + +  
Sbjct: 791 LLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFP 850

Query: 838 NL 839
            L
Sbjct: 851 TL 852


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 291/802 (36%), Positives = 450/802 (56%), Gaps = 55/802 (6%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           +L   K +HA +V     + +V ++  LVN+Y   G ++      FD I  +D  +WN M
Sbjct: 66  NLQSAKCLHARLV-VSKQIQNVCISAKLVNLYCYLG-NVALARHTFDHIQNRDVYAWNLM 123

Query: 152 IATLCRFGKWDLALEAFRM-MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           I+   R G     +  F + ML S + P   T  SV  AC  +        G ++H  +L
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID------GNKIHCLAL 177

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G  W+ ++  +L+ +Y++   V +A+ LF     RD+ SWN ++S   Q+    EA+ 
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
                 LR +  D V++ S+L AC+     + G  IH+Y++++  L    FV + L+D+Y
Sbjct: 238 L--SNGLRAM--DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLY 292

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                +   ++VFD +  + +  WN++I  Y  NE    A+ LF +M  ++ + P+  T+
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTL 351

Query: 390 SSV---------VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            S+         + AC   + F  ++G     I +G        NA++ MY+++G ++ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG--------NAVVVMYAKLGLVDSA 403

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +F+ +   D +SWNT+I+GY   G   +A+    EM N+ EE+               
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAI----EMYNIMEEEGE------------I 447

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
             N  T ++VLP C    AL +G ++H   ++N L  DV V ++L DMY KCG L  A  
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +F  +P  N + WN +I  +G HG G++ + L K M+ EG     VKP+ +TF+ L +AC
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-----VKPDHITFVTLLSAC 562

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           SHSG+V EG   F  M+ DYGI PS  HY C+VD+ GRAG++E A + I  M  + D A 
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD-AS 621

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W +LL ACR+H NV++G+IA+++LF +EP+   ++VLLSN+Y+SA  W+   ++R    
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
             G+RK PG S +E  +++  F  G+ +H   E+++  L  L  +++  GYVPD   VL 
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V ++EKE +L  HSE+LAIAF ++ TP  TTIR+ KNLRVC DCH  TKFISKI  REI
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           I+RD  RFHHFKNG CSCGDYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 179/629 (28%), Positives = 302/629 (48%), Gaps = 56/629 (8%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSY-IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           Q R   +W   +    R+    E I  + + M  S + PD   FP+VLKA   + D   G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            +IH   +K+G+ +  V VA +L+++Y +  + + +   +FD +  +D  SWN+MI+  C
Sbjct: 170 NKIHCLALKFGF-MWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDMGSWNAMISGYC 227

Query: 157 RFGKWDLAL---EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
           + G    AL      R M        S T+VS+  AC+          G  +H  S++ G
Sbjct: 228 QSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAG---DFNRGVTIHSYSIKHG 277

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            E   F+ N L+ +YA+ GR+ D + +F     RDL+SWN+I+ +   N++ L A+   +
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M L  I+PD +++ S+    S L  +   + +  + LR    +++  +G+A+V MY   
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V+  R VF+++ +  +  WN +I+GY QN +  EA+ ++  MEE   +  N  T  SV
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PAC ++ A      +HG  +K GL  D +V  +L DMY + GR+E + ++F  +   ++
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V WNT+I  +   G    A+ML +EM              LDE V   KP+ IT +T+L 
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEM--------------LDEGV---KPDHITFVTLLS 560

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGCLNFARRVFDLMP 566
            C     + +G+         M+ TD  +  +L      VDMY + G L  A +    M 
Sbjct: 561 ACSHSGLVDEGQWCF-----EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615

Query: 567 VR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           ++ +   W  ++ A  +HG        L  + +E     EV+P  V +  L +    S  
Sbjct: 616 LQPDASIWGALLSACRVHGNVD-----LGKIASE--HLFEVEPEHVGYHVLLSNMYASAG 668

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
             EG+D    +    G+  +P   +  VD
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 407/683 (59%), Gaps = 30/683 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H   LR G + + F  + ++A  +  + G +  A+ +F    +    + N+I+   +
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
             +   EA++F ++M ++G+ PD  +  S+  +C +      GK+IH ++ +     D +
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASD-T 120

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           +  + L++MY NC  +   R+VFD + DK +  W  MI  + Q +   EA+ LF +M + 
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + PN  T+ +V+ AC R+      + IH +  + G GR   +   LMD+Y + G +++
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +FD  + ++  SWN MI G+     + +AL+L REMQ                    
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTK-----------------G 283

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            K + +T+ ++L  C  L AL  GK +HAY  +  +  DV +G+ALVDMYAKCG +  A 
Sbjct: 284 IKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAI 343

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +VF  MP ++V+TW  +I+   M G+ +  L+    M  +G     VKP+ +TF+ + AA
Sbjct: 344 QVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKG-----VKPDAITFVGVLAA 398

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH+G V EG+  F  M D YGI+P+ +HY  +VD+LGRAG++ +A +LI  MP   D+ 
Sbjct: 399 CSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQF 458

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
                LLGACRIH N+E  E AA+ L  ++P  +  YVLLSNIY S++ W++A   R+ M
Sbjct: 459 -VLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELM 517

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
            E G+RK PGCS IE    +H+F+ GD SH+QS +++  LE++  +++  GYVPD S VL
Sbjct: 518 AERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVL 577

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
            ++ EEEKET L  HSEKLAIAFG+L+T  GT IRV KNLR+C+DCH ATK ISK+ +RE
Sbjct: 578 FDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNRE 637

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           II+RD  RFHHFK+GTCSC  +W
Sbjct: 638 IIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 226/422 (53%), Gaps = 20/422 (4%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
           + +P P S T C       +R     N  +EA+L Y EM    + PD + FP++ K+   
Sbjct: 46  SQIPNPTSYT-CNSI----IRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC-- 98

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
            ++ S GKQIH H  K G+  S     NTL+NMY  CG  +    KVFD++ +K  VSW 
Sbjct: 99  -RNSSEGKQIHCHSTKLGFA-SDTYAQNTLMNMYSNCGC-LVSARKVFDKMEDKTVVSWA 155

Query: 150 SMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           +MI    ++ + + A+  F RMM   NV+P+  TLV+V  AC   +R   L + +++H  
Sbjct: 156 TMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTAC---ARARDLAMVKRIHEY 212

Query: 209 SLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
               G     ++N  LM +Y K G V  A+ LF   ++++L SWN +++   ++  + EA
Sbjct: 213 IDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEA 272

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           ++  R+M  +GIK D V++AS+L AC+HL  L+ GK +HAY  +  I +D + +G+ALVD
Sbjct: 273 LLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVA-LGTALVD 331

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E   +VF  + +K +  W A+I G       E AL  F +M  + G+ P+A 
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEM-HIKGVKPDAI 390

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFD 445
           T   V+ AC  +  F D+   H +++    G    +++   L+D+  R GRI  ++ +  
Sbjct: 391 TFVGVLAACSHA-GFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449

Query: 446 DM 447
            M
Sbjct: 450 SM 451


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 296/811 (36%), Positives = 448/811 (55%), Gaps = 49/811 (6%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L + A   DL LG+ +H  +++     +   VAN+L+ MY KCG+ +    +VFD++  
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGA-VEAARRVFDQMCG 104

Query: 143 -KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            +D VSW +M + L R G    +L     ML   + P++FTL + A AC     ++  RL
Sbjct: 105 VRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFP---QELFRL 161

Query: 202 -GRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            G  V G  L+ G W T   +  AL+ M+A+ G +  A+ +F    +R  V W  +++  
Sbjct: 162 AGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRY 221

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            Q     + V     M   G +PDG S++S++ AC+ L  +  G+++H+ ALR   L+ +
Sbjct: 222 VQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLG-LVSD 280

Query: 319 SFVGSALVDMYCNC---REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           S V   LVDMY      R +E  R+VF  +    +  W A+I+GY Q+   E  +M   +
Sbjct: 281 SCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFR 340

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
                 + PN  T S+++ AC           IH H +K  +     V NAL+ MY+  G
Sbjct: 341 EMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESG 400

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR----NNVY 491
            +E ++  FD +   + +S +                       ++E E+N     + + 
Sbjct: 401 CMEEARKAFDQLYETNILSMS----------------------PDVETERNNASCSSKIE 438

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            +D+ V     ++ T  ++L    ++  L KG+++HA +++    +D  + ++LV MYA+
Sbjct: 439 GMDDGV-----STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYAR 493

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L  A R FD M   NVI+W  II     HG  ++ L +  +M+  G     VKPN+V
Sbjct: 494 CGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAG-----VKPNDV 548

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           T+IA+ +ACSH G+V EG + F  M+ D+G+ P  +HYAC+VDLL R+G VE+A Q IN 
Sbjct: 549 TYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINE 608

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP + D A  W +LL ACR + N EIGEIAA ++  LEP   + YVLLSN+Y+ A LWD+
Sbjct: 609 MPCKAD-ALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDE 667

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              +R  M++  + KE G SW++ G+ IH+F AGD SH  +  ++  L  L   ++  GY
Sbjct: 668 VARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGY 727

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           VPDTS VLH+++EE KE  L  HSEK+A+AFG++ T     +R+ KNLRVC DCH A K+
Sbjct: 728 VPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKY 787

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ISK   REIILRD  RFH  K+G CSCG+YW
Sbjct: 788 ISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 271/565 (47%), Gaps = 44/565 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL-GKQIHAH 102
           SW       AR+   RE++    EM    ++P+ F   A  +A    +   L G  +   
Sbjct: 110 SWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGF 169

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G+  + V+V   L++M+ + G D+    +VFD + E+  V W  +I    + G   
Sbjct: 170 VLKTGFWGTDVSVGCALIDMFARNG-DLVAAQRVFDGLIERTSVVWTLLITRYVQAGCAS 228

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             +E F  ML    EP  +++ S+  AC+ L     +RLG+Q+H  +LR+G   ++ +  
Sbjct: 229 KVVELFLHMLDDGFEPDGYSMSSMISACTELG---SVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 222 ALMAMYAKLG---RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMALR 277
            L+ MYAKL     ++ A+ +FK+    +++SW  ++S   Q+      VM L R+M   
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            I+P+ ++ +++L AC++L   D+G++IHA+ L+  I   N  VG+ALV MY     +E 
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVN-VVGNALVSMYAESGCMEE 404

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS--SVVPA 395
            R+ FD + +  I   +  +     N              ++ G+    +T +  S++ A
Sbjct: 405 ARKAFDQLYETNILSMSPDVETERNNASCS---------SKIEGMDDGVSTFTFASLLSA 455

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                     + +H  ++K G   D+ + N+L+ MY+R G +E +   FD+M+  + +SW
Sbjct: 456 AASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISW 515

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
            ++I+G    G    AL +  +M                  +   KPN +T + VL  C 
Sbjct: 516 TSIISGLAKHGYAKQALSMFHDM-----------------ILAGVKPNDVTYIAVLSACS 558

Query: 516 ALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
            +  + +GKE H  +++  + L   +   + +VD+ A+ G +  AR+  + MP + + + 
Sbjct: 559 HVGLVKEGKE-HFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALV 617

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMV 597
           W  ++ A   +G   E+ E+  N V
Sbjct: 618 WKTLLSACRTYGN-TEIGEIAANHV 641



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 171/343 (49%), Gaps = 30/343 (8%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           A +L + +    L  G+ +H   LR++IL  ++ V ++L+ MY  C  VE  RRVFD + 
Sbjct: 44  AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103

Query: 347 D-KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             + +  W AM +   +N  + E+L L  +M E+  L PNA T+ +   AC   E F   
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELG-LRPNAFTLCAAARACFPQELFRLA 162

Query: 406 EG-IHGHAIKLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
            G + G  +K G  G D  V  AL+DM++R G +  ++ +FD +  R +V W  +IT Y 
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G     + L   M              LD+     +P+  ++ +++  C  L ++  G
Sbjct: 223 QAGCASKVVELFLHM--------------LDDGF---EPDGYSMSSMISACTELGSVRLG 265

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCG---CLNFARRVFDLMPVRNVITWNVIIMAY 580
           +++H+ A+R  L +D  V   LVDMYAK      +  AR+VF  MP  NV++W  +I  Y
Sbjct: 266 QQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGY 325

Query: 581 GMHG-EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
              G +   V+ L + M+ E      ++PN +T+  L  AC++
Sbjct: 326 VQSGVQENNVMALFREMLNE-----SIRPNHITYSNLLKACAN 363



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 26/323 (8%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           + EM    I+P++  +  +LKA A + D   G+QIHAHV+K      +V V N LV+MY 
Sbjct: 339 FREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNV-VGNALVSMYA 397

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP-----S 179
           + G  M +  K FD++ E + +S +            D+  E       S +E      S
Sbjct: 398 ESGC-MEEARKAFDQLYETNILSMSP-----------DVETERNNASCSSKIEGMDDGVS 445

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           +FT  S+  A +++     L  G+++H  S++ G   +  I N+L++MYA+ G ++DA  
Sbjct: 446 TFTFASLLSAAASVGL---LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACR 502

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            F   +D +++SW +I+S L+++    +A+     M L G+KP+ V+  +VL ACSH+ +
Sbjct: 503 AFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGL 562

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMI 357
           +  GKE      ++  L+      + +VD+      VE  R+  + +  K  AL W  ++
Sbjct: 563 VKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLL 622

Query: 358 TG---YGQNEYDEEALMLFIKME 377
           +    YG  E  E A    I +E
Sbjct: 623 SACRTYGNTEIGEIAANHVINLE 645


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/610 (41%), Positives = 375/610 (61%), Gaps = 25/610 (4%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M ++G++ +     SVL  C     +  G+ +HA+ ++        ++ + L+ +Y  CR
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCR 59

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   RRV D + ++ +  W AMI+GY Q  Y  EAL LF++M  ++G  PN  T ++V+
Sbjct: 60  CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEML-MSGTAPNEFTFATVL 118

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            +C  S  F     IH   IK       +V ++L+DMY++ G+I  ++ +FD +  RD V
Sbjct: 119 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 178

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           S   +I+GY   G   +AL L R +Q    E  R+N               +T  +VL  
Sbjct: 179 SCTAIISGYAQLGLDEEALDLFRRLQR---EGMRSNY--------------VTYASVLTA 221

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L+AL  G+++H++ +R  L   VV+ ++L+DMY+KCG L ++RR+FD MP R VI+W
Sbjct: 222 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 281

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +++ Y  HG G+E +EL K M  E     +VKP+ VTF+A+ + CSH GM   G+++F
Sbjct: 282 NAMLVGYSKHGLGREAVELFKLMKEEN----KVKPDSVTFLAVLSGCSHGGMEDRGLEIF 337

Query: 634 YKMKDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           Y+M +   G EP  +HY CVVDL GRAG+VE+A++ I  MP E   A  W SLLGACR+H
Sbjct: 338 YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFE-PTAAIWGSLLGACRVH 396

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
           QNV IGE  A+ L  +E + A +YV+LSN+Y+SA  WD    VR+ MKE  V KEPG SW
Sbjct: 397 QNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSW 456

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IE    +H F A D SH + E++   +  LS ++++ GYVP+ SCVL++V++E+KE +L 
Sbjct: 457 IELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQ 516

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
           GHSEKLA+AFG++ TP GT +R+ KNLR+C DCH   KF+S++  RE+ LRD  RFHH  
Sbjct: 517 GHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIV 576

Query: 873 NGTCSCGDYW 882
            GTCSCGDYW
Sbjct: 577 GGTCSCGDYW 586



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 211/420 (50%), Gaps = 18/420 (4%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
            + +VL        +  G+++HAH++K  Y    V +   L+ +Y KC   + D  +V D
Sbjct: 12  GYDSVLTECISQTAIREGQRVHAHMIKTCYE-PPVYLRTRLIVLYNKCRC-LGDARRVLD 69

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + E++ VSW +MI+   + G    AL  F  ML S   P+ FT  +V  +C++ S   G
Sbjct: 70  EMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS---G 126

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            +LGRQ+H   ++   E + F+ ++L+ MYAK G++ +A+ +F    +RD+VS   I+S 
Sbjct: 127 FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND---- 313
            +Q     EA+   R++   G++ + V+ ASVL A S L  LD G+++H++ LR      
Sbjct: 187 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 246

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +++ NS     L+DMY  C  +   RR+FD + ++ +  WNAM+ GY ++    EA+ LF
Sbjct: 247 VVLQNS-----LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMY 431
             M+E   + P++ T  +V+  C           I    +    G +  +++   ++D++
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 361

Query: 432 SRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            R GR+E +      M    T + W +++    +         + R +  +E E   N V
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 421



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 32/359 (8%)

Query: 22  HQPPATTATSLPLPGSQTRCKE---------------SWIESLRSEARSNQFREAILSYI 66
           ++PP    T L +  ++ RC                 SW   +   ++     EA+  ++
Sbjct: 41  YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 100

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           EM  S   P+ F F  VL +        LG+QIH+ V+K  +  S + V ++L++MY K 
Sbjct: 101 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE-SHIFVGSSLLDMYAKA 159

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G  + +  +VFD + E+D VS  ++I+   + G  + AL+ FR +    +  +  T  SV
Sbjct: 160 GK-ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASV 218

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             A S L+  D    GRQVH + LR    +   + N+L+ MY+K G +  ++ +F S  +
Sbjct: 219 LTALSGLAALDH---GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 275

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKE 304
           R ++SWN ++   S++    EAV   + M     +KPD V+  +VL  CSH  M D G E
Sbjct: 276 RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLE 335

Query: 305 IHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFIS----DKKIALWNAMI 357
           I  Y + N  D           +VD++     VE     F+FI     +   A+W +++
Sbjct: 336 IF-YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVE---EAFEFIKKMPFEPTAAIWGSLL 390


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/683 (37%), Positives = 399/683 (58%), Gaps = 29/683 (4%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +Q+H   L +G +++ F++  L+   +  G +  A+ +F       +  WN I+   S+N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           + F +A++    M L  + PD  +   +L ACS L  L  G+ +HA   R     D  FV
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD-VFV 156

Query: 322 GSALVDMYCNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            + L+ +Y  CR +   R VF+ +   ++ I  W A+++ Y QN    EAL +F  M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + P+   + SV+ A    +       IH   +K+GL  +  +  +L  MY++ G++  
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +K +FD M+  + + WN MI+GY   G   +A+ +  EM N +                 
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD----------------- 318

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P++I++ + +  C  + +L + + ++ Y  R+    DV + SAL+DM+AKCG +  AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VFD    R+V+ W+ +I+ YG+HG  +E + L + M     RGG V PN+VTF+ L  A
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM----ERGG-VHPNDVTFLGLLMA 433

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+HSGMV EG   F+ +  D+ I P   HYACV+DLLGRAG ++ AY++I  MP +    
Sbjct: 434 CNHSGMVREGW-WFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGV 491

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL AC+ H++VE+GE AAQ LF ++P    HYV LSN+Y++A+LWD+  +VR +M
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           KE G+ K+ GCSW+E    +  F  GD SH + E++   +E +  R+++ G+V +    L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H++N+EE E  LC HSE++AIA+G+++TP GT +R+ KNLR C +CH ATK ISK+  RE
Sbjct: 612 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 671

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I++RD  RFHHFK+G CSCGDYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 252/519 (48%), Gaps = 32/519 (6%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S I  D+F    +  A    Q     KQIHA ++  G   S   +   L++     G 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQ----LKQIHARLLVLGLQFSGFLITK-LIHASSSFG- 67

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    +VFD +       WN++I    R   +  AL  +  M  + V P SFT   +  
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS--FED 245
           ACS LS    L++GR VH    R+G + + F+ N L+A+YAK  R+  A+T+F+     +
Sbjct: 128 ACSGLSH---LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R +VSW  IVS+ +QN + +EA+     M    +KPD V++ SVL A + L+ L  G+ I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           HA  ++  + I+   + S L  MY  C +V   + +FD +    + LWNAMI+GY +N Y
Sbjct: 245 HASVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA+ +F +M     + P+  +++S + AC +  +      ++ +  +     D ++ +
Sbjct: 304 AREAIDMFHEMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DM+++ G +E ++ +FD    RD V W+ MI GY + G+  +A+ L R M+      
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME------ 416

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
            R  V+          PN +T + +L  C     + +G         + +       + +
Sbjct: 417 -RGGVH----------PNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACV 465

Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +D+  + G L+ A  V   MPV+  V  W  ++ A   H
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 224/428 (52%), Gaps = 14/428 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R+N F++A+L Y  M  + + PD+F FP +LKA +G+  L +G+ +HA V 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKWD 162
           + G+  + V V N L+ +Y KC   +     VF+   + E+  VSW ++++   + G+  
Sbjct: 147 RLGFD-ADVFVQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            ALE F  M   +V+P    LVSV  A + L     L+ GR +H + +++G E    ++ 
Sbjct: 205 EALEIFSHMRKMDVKPDWVALVSVLNAFTCLQ---DLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MYAK G+V  AK LF   +  +L+ WN ++S  ++N    EA+    +M  + ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +SI S + AC+ +  L+  + ++ Y  R+D   D+ F+ SAL+DM+  C  VE  R V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGARLV 380

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD   D+ + +W+AMI GYG +    EA+ L+  ME   G+ PN  T   ++ AC  S  
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGM 439

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
             +            +   +     ++D+  R G ++ +  +   M V+  V+ W  +++
Sbjct: 440 VREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499

Query: 461 GYTICGQH 468
               C +H
Sbjct: 500 A---CKKH 504



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 7/276 (2%)

Query: 27  TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA 86
           T    LPLP    R   SW   + + A++ +  EA+  +  M + D++PD  A  +VL A
Sbjct: 175 TVFEGLPLP---ERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNA 231

Query: 87  VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
              +QDL  G+ IHA VVK G  +    +  +L  MY KCG  +     +FD++   + +
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLNTMYAKCGQ-VATAKILFDKMKSPNLI 289

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
            WN+MI+   + G    A++ F  M+  +V P + ++ S   AC+ +   +  R   +  
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349

Query: 207 GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
           G S    +   FI +AL+ M+AK G V+ A+ +F    DRD+V W+ ++     + +  E
Sbjct: 350 GRSDYRDD--VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           A+   R M   G+ P+ V+   +L AC+H  M+  G
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 291/838 (34%), Positives = 446/838 (53%), Gaps = 121/838 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +        + E I  +  M    ++PD+F FP V KA + +++  +GK ++ ++
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G+  +S  V  ++++M+ KCG  M    + F+ I  KD   WN M++     G++  
Sbjct: 217 LSIGFEGNSC-VKGSILDMFIKCGR-MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL+    M  S V+P   T                                WN     A+
Sbjct: 275 ALKCISDMKLSGVKPDQVT--------------------------------WN-----AI 297

Query: 224 MAMYAKLGRVDDAKTLF------KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           ++ YA+ G+ ++A   F      K F+  ++VSW  +++   QN    EA+   R+M L 
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKP-NVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+KP+ ++IAS + AC++L +L  G+EIH Y ++ + L  +  VG++LVD Y  CR VE 
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-------------------- 377
            RR F  I    +  WNAM+ GY      EEA+ L  +M+                    
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476

Query: 378 --------------EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
                            G+ PN TT+S  + AC +       + IHG+ ++  +     V
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL+ MYS    +E++ ++F ++  RD V WN++I+     G+  +AL LLREM     
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM----- 591

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
             N +NV          + N++T+++ LP C  L+AL +GKEIH + IR  L T   + +
Sbjct: 592 --NLSNV----------EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           +L+DMY +CG +  +RR+FDLMP R++++WNV+I  YGMHG G + + L +     G   
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG--- 696

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             +KPN +TF  L +ACSHSG++ EG   F  MK +Y ++P+ + YAC+VDLL RAG+  
Sbjct: 697 --LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN 754

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +  + I  MP E   A  W SLLGACRIH N ++ E AA+ LF LEP  + +YVL++NIY
Sbjct: 755 ETLEFIEKMPFE-PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIY 813

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           S+A  W+ A  +R  MKE GV K PGCSWIE   ++H F+ GD SH   EQ+ G      
Sbjct: 814 SAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISG------ 867

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
               K+G +        +V+E+EKE  LCGHSEK+A+AFG+++T  GT +R+ KNLRV
Sbjct: 868 ----KDGKL--------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 179/632 (28%), Positives = 303/632 (47%), Gaps = 65/632 (10%)

Query: 62  ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           +LS +++T  D   + +A  ++L+    + +L LG Q+HA +V  G  +    + + L+ 
Sbjct: 76  LLSSMDLTNPDECIEIYA--SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF-LGSRLLE 132

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           +Y + G  + D  ++FD+++E++  SW +++   C  G ++  ++ F +M+   V P  F
Sbjct: 133 VYCQTGC-VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHF 191

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
               V  ACS L      R+G+ V+   L +G E N+ +  +++ M+ K GR+D A+  F
Sbjct: 192 VFPKVFKACSELKN---YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +  E +D+  WN +VS  +   +F +A+  +  M L G+KPD V+  +++   +     +
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
              E   Y L    L D                                +  W A+I G 
Sbjct: 309 ---EASKYFLEMGGLKD----------------------------FKPNVVSWTALIAGS 337

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGR 419
            QN YD EAL +F KM  + G+ PN+ T++S V AC           IHG+ IK+  L  
Sbjct: 338 EQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM- 478
           D  V N+L+D Y++   +E+++  F  ++  D VSWN M+ GY + G H +A+ LL EM 
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456

Query: 479 -QNMEEEKNRNN-------VYDLDETVLR---------PKPNSITLMTVLPGCGALSALA 521
            Q +E +    N        Y   +  L            PN+ T+   L  CG +  L 
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GKEIH Y +RN +     VGSAL+ MY+ C  L  A  VF  +  R+V+ WN II A  
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G     L+LL+ M         V+ N VT ++   ACS    + +G ++ ++     G
Sbjct: 577 QSGRSVNALDLLREM-----NLSNVEVNTVTMVSALPACSKLAALRQGKEI-HQFIIRCG 630

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           ++        ++D+ GR G ++ + ++ ++MP
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 268/586 (45%), Gaps = 101/586 (17%)

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDG-VSI-ASVLPACSHLEMLDTGKEIHAYALRNDI 314
           S+ +N     A M L  M L    PD  + I AS+L  C  L  L  G ++HA  + N +
Sbjct: 63  SVHRNGVLNNAAMLLSSMDL--TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV 120

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY-GQNEYDEEALMLF 373
            +   F+GS L+++YC    VE  RR+FD +S++ +  W A++  Y G  +Y+E   + +
Sbjct: 121 DV-CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFY 179

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           + + E  G+ P+      V  AC   + +   + ++ + + +G   +  V+ +++DM+ +
Sbjct: 180 LMVNE--GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIK 237

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ-------------- 479
            GR++I++  F+++E +D   WN M++GYT  G+   AL  + +M+              
Sbjct: 238 CGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAI 297

Query: 480 --------NMEEEK-------------------------NRNNVYDLDE-TVLRP----- 500
                     EE                           +  N YD +  +V R      
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 501 -KPNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFA 558
            KPNSIT+ + +  C  LS L  G+EIH Y I+   L +D++VG++LVD YAKC  +  A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           RR F ++   ++++WN ++  Y + G  +E +ELL  M  +G     ++P+ +T+  L  
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-----IEPDIITWNGLVT 472

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA-----GKVEDAYQLINMMP 673
             +  G     ++ F +M    G++P+    +  +   G+      GK    Y L N + 
Sbjct: 473 GFTQYGDGKAALEFFQRMH-SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIE 531

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQLWDK 731
                  A  S+   C    ++E+    A ++F  L   DV    V+ ++I S+     +
Sbjct: 532 LSTGVGSALISMYSGC---DSLEV----ACSVFSELSTRDV----VVWNSIISACAQSGR 580

Query: 732 AMDVRKKMKEMG-----------VRKEPGCS---WIEFGDEIHKFL 763
           +++    ++EM            V   P CS    +  G EIH+F+
Sbjct: 581 SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 37/255 (14%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR    W   + + A+S +   A+    EM  S+++ +     + L A + +  L  GK+
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IH  +++ G    +  + N+L++MYG+CGS +    ++FD + ++D VSWN MI+     
Sbjct: 622 IHQFIIRCGLDTCNF-ILNSLIDMYGRCGS-IQKSRRIFDLMPQRDLVSWNVMISVYGMH 679

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G    A+  F+      ++P+  T  ++  ACS              H   +  G W  F
Sbjct: 680 GFGMDAVNLFQXFRTMGLKPNHITFTNLLSACS--------------HSGLIEEG-WKYF 724

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            M  +   YA                D  +  +  +V  LS+  +F E + F+ +M    
Sbjct: 725 KM--MKTEYAM---------------DPAVEQYACMVDLLSRAGQFNETLEFIEKMPF-- 765

Query: 279 IKPDGVSIASVLPAC 293
            +P+     S+L AC
Sbjct: 766 -EPNAAVWGSLLGAC 779


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/685 (38%), Positives = 407/685 (59%), Gaps = 35/685 (5%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H   LR   + + F  + ++A  A    G +  A+ +F    +    + N+I+   +
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
             +   +A++F + M L+G+ PD  +  S+  +C    +L  GK++H ++ +     D +
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASD-A 172

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           ++ + L++MY NC  +   R+VFD + +K +  W  MI  Y Q +   EA+ LF +ME +
Sbjct: 173 YIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRME-I 231

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           A + PN  T+ +V+ AC RS      + +H +  + G+G    + +ALMD+Y + G   +
Sbjct: 232 ASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPL 291

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +F+ M  ++   WN MI G+     + +AL L  EMQ                 +  
Sbjct: 292 ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ-----------------LSG 334

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            K + +T+ ++L  C  L AL  GK +H Y  +  +  DV +G+ALVDMYAKCG +  A 
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RVF  MP ++V+TW  +I+   M G+G + LEL   M     +  EVKP+ +TF+ + AA
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-----QMSEVKPDAITFVGVLAA 449

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFD 677
           CSH+G+V+EG+  F  M + YGI+PS +HY C+VD+LGRAG++ +A  LI  MP  P++ 
Sbjct: 450 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDY- 508

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
                  LL ACRIH N+ + E AAQ L  L+P     YVLLSNIYSS + W+ A  +R+
Sbjct: 509 --FVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRE 566

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            M E  ++K PGCS IE G  +H+F+ GD SH QS +++  L+++  R++  GYVPD S 
Sbjct: 567 LMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 626

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VL +++E+EKE  L  HSEKLAIAFG+L+T PGT IRV KNLRVC+DCH A KFIS++ +
Sbjct: 627 VLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYN 686

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REII+RD  RFHHF  G+CSC D+W
Sbjct: 687 REIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 232/447 (51%), Gaps = 24/447 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R     N  R+AIL Y  M    + PD F FP++ K+  G+  L  GKQ+H H  K G+
Sbjct: 112 IRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS-CGV--LCEGKQLHCHSTKLGF 168

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA- 167
             S   + NTL+NMY  CG  +    KVFD++  K  VSW +MI     + +WDL  EA 
Sbjct: 169 A-SDAYIQNTLMNMYSNCGC-LVSARKVFDKMVNKSVVSWATMIGA---YAQWDLPHEAI 223

Query: 168 --FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALM 224
             FR M  ++V+P+  TLV+V  AC   +R   L   +QVH      G  ++T + +ALM
Sbjct: 224 KLFRRMEIASVKPNEITLVNVLTAC---ARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            +Y K G    A+ LF    +++L  WN +++   ++  + EA+    +M L G+K D V
Sbjct: 281 DVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKV 340

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           ++AS+L AC+HL  L+ GK +H Y  +  I +D + +G+ALVDMY  C  +E   RVF  
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA-LGTALVDMYAKCGSIESAMRVFQE 399

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + +K +  W A+I G        +AL LF +M +++ + P+A T   V+ AC  S A   
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDAITFVGVLAAC--SHAGLV 456

Query: 405 KEGI---HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            EGI   +    K G+         ++DM  R GRI  ++ +  +M +     +  ++  
Sbjct: 457 NEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM--APDYFVLVGL 514

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRN 488
            + C  HG+ ++  R  Q + E   +N
Sbjct: 515 LSACRIHGNLVVAERAAQQLIELDPKN 541



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A+ +   EAI  +  M  + ++P+      VL A A  +DL   KQ+H ++
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G G  +V + + L+++Y KCG        +F+++ EK+   WN MI        ++ 
Sbjct: 265 DETGIGFHTV-LTSALMDVYCKCGCYPL-ARDLFNKMPEKNLFCWNIMINGHVEDSDYEE 322

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M  S V+    T+ S+ +AC++L     L LG+ +H    +   E +  +  A
Sbjct: 323 ALSLFNEMQLSGVKGDKVTMASLLIACTHLG---ALELGKWLHVYIEKEKIEVDVALGTA 379

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G ++ A  +F+   ++D+++W  ++  L+   + L+A+    +M +  +KPD
Sbjct: 380 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 439

Query: 283 GVSIASVLPACSHLEMLDTG 302
            ++   VL ACSH  +++ G
Sbjct: 440 AITFVGVLAACSHAGLVNEG 459


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 371/597 (62%), Gaps = 26/597 (4%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S+L AC++   +  G+ +H   ++  +    +F  + L+DMY  C  ++    VFD +
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNT-LLDMYAKCGVLDGAILVFDLM 59

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           S + +  W ++I  Y +    +EA+ LF +M+   G+ P+  T+++V+ AC  + +  + 
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDR-EGVSPDIFTITTVLHACACNGSLENG 118

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +H +  +  +  + +V NALMDMY++ G +E + ++F +M V+D +SWNTMI GY+  
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
               +AL L  +M                  VL  KP+  TL  +LP C +L++L +GKE
Sbjct: 179 SLPNEALSLFGDM------------------VLEMKPDGTTLACILPACASLASLDRGKE 220

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H + +RN   +D  V +ALVDMY KCG    AR +FD++P +++ITW V+I  YGMHG 
Sbjct: 221 VHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGF 280

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G   +     M     R   ++P+EV+FI++  ACSHSG++ EG   F  M+D+  ++P 
Sbjct: 281 GNNAITTFNEM-----RQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPK 335

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HYAC+VDLL R+GK+  AY+ I  MP E D A  W +LL  CRIH +V++ E  A+++
Sbjct: 336 LEHYACIVDLLARSGKLAMAYKFIKSMPIEPD-ATIWGALLSGCRIHHDVKLAEKVAEHV 394

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F LEP+   +YVLL+N Y+ A+ W++   +R+K+   G++K PGCSWIE   ++H FLAG
Sbjct: 395 FELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAG 454

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           + SH Q++++   L+ L  +M++EGY P T   L N +  +KET LCGHSEKLA+AFGIL
Sbjct: 455 NSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGIL 514

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           N PP  TIRV+KNLRVC DCH+  KFISK   REI+LRD  RFHHFK+G C C  +W
Sbjct: 515 NLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 210/416 (50%), Gaps = 20/416 (4%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++L+A A   D+SLG+ +H   VK      + T  NTL++MY KCG  +     VFD ++
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKT-TFCNTLLDMYAKCGV-LDGAILVFDLMS 60

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            +  V+W S+IA   R G  D A+  F  M    V P  FT+ +V  AC+       L  
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACAC---NGSLEN 117

Query: 202 GRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           G+ VH N +R  +   N F+ NALM MYAK G ++DA ++F     +D++SWNT++   S
Sbjct: 118 GKDVH-NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +N    EA+     M L  +KPDG ++A +LPAC+ L  LD GKE+H + LRN    D  
Sbjct: 177 KNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQ 235

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            V +ALVDMY  C      R +FD I  K +  W  MI GYG + +   A+  F +M + 
Sbjct: 236 -VANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ- 293

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKE---GIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           AG+ P+  +  S++ AC  S    +      +      +    + Y    ++D+ +R G+
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA--CIVDLLARSGK 351

Query: 437 IEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           + ++      M +  D   W  +++G   C  H D  +  +  +++ E +  N  Y
Sbjct: 352 LAMAYKFIKSMPIEPDATIWGALLSG---CRIHHDVKLAEKVAEHVFELEPENTGY 404



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 215/450 (47%), Gaps = 53/450 (11%)

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           +VS+  AC+N      + LGR VHG+ ++    W T   N L+ MYAK G +D A  +F 
Sbjct: 1   MVSILQACANCG---DVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFD 57

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               R +V+W +++++ ++     EA+    +M   G+ PD  +I +VL AC+    L+ 
Sbjct: 58  LMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 117

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK++H Y   ND +  N FV +AL+DMY  C  +E    VF  +  K I  WN MI GY 
Sbjct: 118 GKDVHNYIREND-MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +N    EAL LF  M  V  + P+ TT++ ++PAC    +    + +HGH ++ G   D+
Sbjct: 177 KNSLPNEALSLFGDM--VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ 234

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V NAL+DMY + G   +++ +FD +  +D ++W  MI GY + G   +A+    EM+  
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
             E                 P+ ++ +++L  C     L +G     +   N++  +  V
Sbjct: 295 GIE-----------------PDEVSFISILYACSHSGLLDEG-----WRFFNVMQDECNV 332

Query: 542 G------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE-------GQ 587
                  + +VD+ A+ G L  A +    MP+  +   W  ++    +H +        +
Sbjct: 333 KPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAE 392

Query: 588 EVLE----------LLKNMVAEGSRGGEVK 607
            V E          LL N  AE  +  EVK
Sbjct: 393 HVFELEPENTGYYVLLANTYAEAEKWEEVK 422



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 7/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + AR     EAI  + EM R  + PD F    VL A A    L  GK +H ++
Sbjct: 66  TWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYI 125

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +     S++ V N L++MY KCGS M D   VF  +  KD +SWN+MI    +    + 
Sbjct: 126 RENDMQ-SNIFVCNALMDMYAKCGS-MEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNA 222
           AL  F  M+   ++P   TL  +  AC++L+  D    G++VHG+ LR G + +  + NA
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLD---RGKEVHGHILRNGFFSDQQVANA 239

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G    A+ LF     +DL++W  +++    +     A+    +M   GI+PD
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 283 GVSIASVLPACSHLEMLDTG 302
            VS  S+L ACSH  +LD G
Sbjct: 300 EVSFISILYACSHSGLLDEG 319


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 282/755 (37%), Positives = 427/755 (56%), Gaps = 63/755 (8%)

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNAL 223
           +   +++ +S+  P  + LV    + + LS    L+  +Q+H   ++ G  NT F ++ L
Sbjct: 8   VSTLQVLSFSDPSPP-YKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKL 66

Query: 224 MAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +   A    G +  A +LFK+  + + V WN ++  LS ++    A+ +   M   G +P
Sbjct: 67  IEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEP 126

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC------NCREV 335
           +  +  S+  +C+ +     GK++HA+ L+   L  N+FV ++L++MY       N R V
Sbjct: 127 NEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG-LEHNAFVHTSLINMYAQNGELVNARLV 185

Query: 336 -------------------------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
                                    +  R +FD I  + +  WNAMI+GY Q+   EEA+
Sbjct: 186 FDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAM 245

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRS-EAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
             F +M   A + PN +TM SV+ AC +S  +      +       GLG +  + N L+D
Sbjct: 246 AFFEEMRR-AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLID 304

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY + G +E +  +F+ ++ ++ VSWN MI GYT    + +AL L R M        ++N
Sbjct: 305 MYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMM-------QSN 357

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVD 547
           +           PN +T +++LP C  L AL  GK +HAY  +NM  +   V + ++L+D
Sbjct: 358 I----------DPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLID 407

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKCG L  A+R+FD M  +++ TWN +I  + MHG     L L   M +EG       
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEG-----FV 462

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+++TF+ +  AC H+G++S G   F  M  DY + P   HY C++DL GRAG  ++A  
Sbjct: 463 PDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAET 522

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           L+  M  + D A  W SLLGACRIH+ +E+ E  A++LF LEP+  S YVLLSNIY+ A 
Sbjct: 523 LVKNMEMKPDGA-IWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAG 581

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+    +R ++ +  ++K PGCS IE    +H+FL GD  H QS +++  L+ +  R+ 
Sbjct: 582 RWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLE 641

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           K G+VPDTS VL++++EE KE +L  HSEKLAIAFG+++T PGTTIR+ KNLRVC +CH 
Sbjct: 642 KAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHS 701

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ATK ISKI +REII RD  RFHHFK+G+CSC DYW
Sbjct: 702 ATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 99/542 (18%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S     A+  Y+ M  S  +P+ + FP++ K+   I+    GKQ+HAHV+
Sbjct: 96  WNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVL 155

Query: 105 KYGYGLSSVTVANTLVNMYGKCG-----------SDMWDVY------------------- 134
           K G   ++  V  +L+NMY + G           S M D                     
Sbjct: 156 KLGLEHNAF-VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEAR 214

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD I  +D VSWN+MI+   + G+ + A+  F  M  + V P+  T++SV  AC+   
Sbjct: 215 ELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQ-- 272

Query: 195 RRDGLRLGRQVHGNSLRVGEW------------NTFIMNALMAMYAKLGRVDDAKTLFKS 242
                       G+SL++G W            N  ++N L+ MY K G +++A  LF+ 
Sbjct: 273 -----------SGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEK 321

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            +D+++VSWN ++   +    + EA+   R+M    I P+ V+  S+LPAC++L  LD G
Sbjct: 322 IQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG 381

Query: 303 KEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           K +HAY  +N   + N+  + ++L+DMY  C ++   +R+FD ++ K +A WNAMI+G+ 
Sbjct: 382 KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFA 441

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
            + + + AL LF +M    G  P+  T   V+ AC              HA  L LGR R
Sbjct: 442 MHGHTDTALGLFSRMTS-EGFVPDDITFVGVLTAC-------------KHAGLLSLGR-R 486

Query: 422 YVQN---------------ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTIC 465
           Y  +                ++D++ R G  + ++T+  +ME++ D   W +++    I 
Sbjct: 487 YFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546

Query: 466 GQHGDALMLLREMQNMEEEKNR-----NNVYD-----LDETVLRPKPNSITLMTVLPGCG 515
            +   A  + + +  +E E        +N+Y       D   +R + N    M  +PGC 
Sbjct: 547 RRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLND-NRMKKVPGCS 605

Query: 516 AL 517
           ++
Sbjct: 606 SI 607



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA-GIQDLSLGKQIHAH 102
           SW   +   A+S +  EA+  + EM R+ + P+     +VL A A     L LG  + + 
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSW 286

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +   G G S++ + N L++MY KCG D+ +   +F++I +K+ VSWN MI        + 
Sbjct: 287 IEDRGLG-SNIRLVNGLIDMYVKCG-DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG---NSLRVGEWNTFI 219
            AL  FR M+ SN++P+  T +S+  AC+NL     L LG+ VH     +++  +    +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLG---ALDLGKWVHAYVDKNMKSMKNTVAL 401

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             +L+ MYAK G +  AK +F     + L +WN ++S  + +     A+    +M   G 
Sbjct: 402 WTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGF 461

Query: 280 KPDGVSIASVLPACSHLEMLDTGK 303
            PD ++   VL AC H  +L  G+
Sbjct: 462 VPDDITFVGVLTACKHAGLLSLGR 485


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/750 (35%), Positives = 420/750 (56%), Gaps = 96/750 (12%)

Query: 204 QVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q H   L+ G  N  +I   L+A Y+     +DA  + +S  D  + S+++++ +L++  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            F +++    +M   G+ PD   + ++   C+ L     GK+IH  A  + + +D +FV 
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMD-AFVQ 154

Query: 323 SALVDMYCNCREVECGRRVFDFISDK---------------------------------- 348
            +L  MY  C  +   R+VFD +S+K                                  
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214

Query: 349 -KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
             I  WN +++G+ ++ Y +EA+++F KM  + G  P+  T+SSV+P+   SE       
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHL-GFCPDQVTVSSVLPSVGDSENLNMGRQ 273

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT--------------- 452
           IHG+ IK GL +D+ V +A++DMY + G +     +FD+ E+ +T               
Sbjct: 274 IHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333

Query: 453 --------------------VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
                               VSW ++I G    G+  +AL L REMQ             
Sbjct: 334 VDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQ------------- 380

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
               V   KPN +T+ ++LP CG ++AL  G+  H +A+R  L  DV VGSAL+DMYAKC
Sbjct: 381 ----VAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC 436

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +  ++ VF++MP +N++ WN ++  Y MHG+ +EV+ + ++++        +KP+ ++
Sbjct: 437 GRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRT-----RLKPDFIS 491

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F +L +AC   G+  EG   F  M ++YGI+P  +HY+C+V+LLGRAGK+++AY LI  +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEI 551

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E D    W +LL +CR+  NV++ EIAAQ LF LEP+    YVL+SNIY++  +W + 
Sbjct: 552 PFEPDSC-VWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEV 610

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             +R KM+ +G++K PGCSWI+  ++++  LA D SH Q +Q+   ++ +SE MRK G+ 
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHR 670

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           P+    L +V E+E+E +L GHSEKLA+ FG+LNTP GT ++V KNLR+C DCH   KFI
Sbjct: 671 PNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           S    REI +RD  RFHHFK+G CSCGD+W
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 246/546 (45%), Gaps = 106/546 (19%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q HA ++K G   +   ++  L+  Y        D   +   I +    S++S+I  L +
Sbjct: 36  QAHARILKSG-AQNDGYISAKLIASYSNYNC-FNDADLILQSIPDPTVYSFSSLIYALTK 93

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
              +  ++  F  M    + P +  L ++   C+ LS     + G+Q+H  +   G + +
Sbjct: 94  AKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELS---AFKAGKQIHCVACVSGLDMD 150

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRD----------------------------- 247
            F+  +L  MY + GR+ DA+ +F    ++D                             
Sbjct: 151 AFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEK 210

Query: 248 ------LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
                 +VSWN I+S  +++    EAV+  ++M   G  PD V+++SVLP+    E L+ 
Sbjct: 211 SGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNM 270

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMY-----------------------CNCREVECG 338
           G++IH Y ++  +L D   + SA++DMY                       CN       
Sbjct: 271 GRQIHGYVIKQGLLKDKCVI-SAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLS 329

Query: 339 R--------RVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           R         +F    ++K+ L    W ++I G  QN  D EAL LF +M +VAG+ PN 
Sbjct: 330 RNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNR 388

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            T+ S++PAC    A       HG A+++ L  D +V +AL+DMY++ GRI++S+ +F+ 
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNM 448

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  ++ V WN+++ GY++   HG A    +E+ ++ E   R           R KP+ I+
Sbjct: 449 MPTKNLVCWNSLMNGYSM---HGKA----KEVMSIFESLMRT----------RLKPDFIS 491

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLNFARR 560
             ++L  CG +    +G     +   NM++ +  +       S +V++  + G L  A  
Sbjct: 492 FTSLLSACGQVGLTDEG-----WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546

Query: 561 VFDLMP 566
           +   +P
Sbjct: 547 LIKEIP 552



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 78/415 (18%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
            ++  F ++I  +  M    + PD    P + K  A +     GKQIH      G  + +
Sbjct: 92  TKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDA 151

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--------------------------- 145
             V  +L +MY +CG  M D  KVFDR++EKD                            
Sbjct: 152 F-VQGSLFHMYMRCGR-MGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEME 209

Query: 146 --------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
                   VSWN +++   R G    A+  F+ M +    P   T+ SV     ++   +
Sbjct: 210 KSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVL---PSVGDSE 266

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFE------------ 244
            L +GRQ+HG  ++ G   +  +++A++ MY K G V     LF  FE            
Sbjct: 267 NLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT 326

Query: 245 -----------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                                  + ++VSW +I++  +QN K +EA+   R+M + G+KP
Sbjct: 327 GLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I S+LPAC ++  L  G+  H +A+R   L+D+  VGSAL+DMY  C  ++  + V
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDDVHVGSALIDMYAKCGRIKMSQIV 445

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           F+ +  K +  WN+++ GY  +   +E + +F  +     L P+  + +S++ AC
Sbjct: 446 FNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSAC 499



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 41/295 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    RS   +EA++ + +M      PD     +VL +V   ++L++G+QIH +V
Sbjct: 219 SWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYV 278

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI----------------------- 140
           +K G  L    V + +++MYGK G  ++ + K+FD                         
Sbjct: 279 IKQGL-LKDKCVISAMLDMYGKSG-HVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336

Query: 141 ------------TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
                        E + VSW S+IA   + GK   ALE FR M  + V+P+  T+ S+  
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC N++    L  GR  HG ++RV    +  + +AL+ MYAK GR+  ++ +F     ++
Sbjct: 397 ACGNIA---ALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           LV WN++++  S + K  E +     +    +KPD +S  S+L AC  + + D G
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ +  EA+  + EM  + ++P+    P++L A   I  L  G+  H   
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+  + L  V V + L++MY KCG   M  +  VF+ +  K+ V WNS++      GK  
Sbjct: 415 VRV-HLLDDVHVGSALIDMYAKCGRIKMSQI--VFNMMPTKNLVCWNSLMNGYSMHGKAK 471

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG----LRLGRQVHGNSLRVGEWNTF 218
             +  F  ++ + ++P   +  S+  AC  +   D       +  + +G   R+  +   
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHY--- 528

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             + ++ +  + G++ +A  L K    + D   W  +++S
Sbjct: 529 --SCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNS 566


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/754 (37%), Positives = 430/754 (57%), Gaps = 34/754 (4%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFDRI   D  ++N++I      G +  A++ +R ML   V P+ +T   V  ACS L 
Sbjct: 55  QVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALV 114

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               LR GR +H ++   G   + F+  AL+ +Y +  R   A+ +F     RD+V+WN 
Sbjct: 115 ---DLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++  + +  +  A+  L  M   G ++P+  ++ S+LP  +    L  G  IHAY LR 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 313 DILIDNS--FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
            +  +     +G+AL+DMY  C+++    RVF  +  +    W+A+I G+   +   EA 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF  M      + +AT+++S +  C           +H    K G+  D    N+L+ M
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ--NMEEEKNRN 488
           Y++ G I  +   FD++ V+DT+S+  +++G    G+  +A ++ ++MQ  NME      
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME------ 405

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                        P+  T+++++P C  L+AL  GK  H   I   LA +  + ++L+DM
Sbjct: 406 -------------PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKCG ++ +R+VFD MP R+V++WN +I  YG+HG G+E   L   M  +G       P
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-----FAP 507

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           ++VTFI L AACSHSG+V+EG   F  M   YGI P  +HY C+VDLL R G +++AYQ 
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF 567

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP + D    W +LLGACRIH+N+++G+  ++ +  L P+   ++VLLSNI+S+A  
Sbjct: 568 IQSMPLKAD-VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           +D+A +VR   K  G +K PG SWIE    +H F+ GD SH  S  ++  L+N+   ++K
Sbjct: 627 FDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
            GY  DTS VL ++ EEEKE  L  HSEKLAIAFG+L+     TI V KNLRVC DCH A
Sbjct: 687 LGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTA 746

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K+++ + +R II+RD  RFHHFKNG CSCG++W
Sbjct: 747 IKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 274/583 (46%), Gaps = 46/583 (7%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P    R   + I   R+ +    F  AI  Y  M R  + P+ + FP VLKA + + DL
Sbjct: 60  IPAPDARAYNALI---RAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDL 116

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G+ IHAH    G   + + V+  L+++Y +C +       VF ++  +D V+WN+M+A
Sbjct: 117 RAGRTIHAHAAAAGLH-TDLFVSTALIDLYIRC-ARFGPARNVFAKMPMRDVVAWNAMLA 174

Query: 154 TLCRFGKWDLAL-EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                G +  A+     M  +  + P++ TLVS+      L++   L  G  +H   LR 
Sbjct: 175 GYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSL---LPLLAQHGALFQGTSIHAYCLRA 231

Query: 213 ----GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
                E    I  AL+ MYAK  ++  A  +F     R+ V+W+ ++      D+  EA 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 269 MFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
              + M + G+      S+AS L  C+ L  L  G ++HA   ++ I  D +   ++L+ 
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT-ASNSLLS 350

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +      FD I+ K    + A+++G  QN   EEA ++F KM +   + P+  
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM-QACNMEPDIA 409

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM S++PAC    A    +  HG  I  GL  +  + N+L+DMY++ G+I++S+ +FD M
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWNTMI GY I G   +A  L   M+N                     P+ +T 
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFA-----------------PDDVTF 512

Query: 508 MTVLPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           + ++  C     + +GK       H Y I   +   +     +VD+ A+ G L+ A +  
Sbjct: 513 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFI 568

Query: 563 DLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
             MP++ +V  W  ++ A  +H     G++V  +++ +  EG+
Sbjct: 569 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 224/470 (47%), Gaps = 38/470 (8%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G++  A+ +F      D  ++N ++ + S    F  A+   R M    + P+  +   VL
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            ACS L  L  G+ IHA+A    +  D  FV +AL+D+Y  C      R VF  +  + +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTD-LFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAM+ GY  +     A+   + M++  GL PNA+T+ S++P   +  A      IH 
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 411 HAIKLGLGRDR---YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           + ++  L ++     +  AL+DMY++  ++  +  +F  M VR+ V+W+ +I G+ +C +
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +A  L ++M              L E +      S+   + L  C +L+ L  G ++H
Sbjct: 287 MTEAFNLFKDM--------------LVEGLCFLSATSVA--SALRVCASLADLHMGTQLH 330

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A   ++ +  D+   ++L+ MYAK G +N A   FD + V++ I++  ++     +G+ +
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH-----SGMVSEGMDLFYKMKDDYGI 642
           E   + K M A       ++P+  T ++L  ACSH      G  S G  +   +  +  I
Sbjct: 391 EAFLVFKKMQA-----CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             S      ++D+  + GK++ + Q+ + MP       +W++++    IH
Sbjct: 446 CNS------LIDMYAKCGKIDLSRQVFDKMPAR--DVVSWNTMIAGYGIH 487


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/787 (35%), Positives = 439/787 (55%), Gaps = 32/787 (4%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K+I   V+K G    S  + ++LVN+Y KC S +    +V + +  +D   WN  +++  
Sbjct: 9   KKIIFRVIKNGICPDS-HLWSSLVNVYVKCES-LQCARQVLEEMPIQDVQQWNQKLSSAN 66

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  A++ F +M ++ +  + F   S+  A ++L        G  +H    + G E 
Sbjct: 67  SPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDN---HYGESIHACVCKYGFES 123

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  I NA + MY K   V++    FK+    +L S N ++S     +   +    L Q+ 
Sbjct: 124 DILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLL 183

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           + G +P+  +  S+L  C+    L+ GK IH   +++ I  D S + ++LV++Y  C   
Sbjct: 184 VEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPD-SHLWNSLVNVYAKCGSA 242

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               +VF  I ++ +  W A+ITG+    Y    L +F +M    G  PN  T  S++ +
Sbjct: 243 NYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQML-AEGFNPNMYTFISILRS 300

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C         + +H   +K  L  + +V  AL+DMY++   +E ++TIF+ +  RD  +W
Sbjct: 301 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 360

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             ++ GY   GQ   A+    +MQ       R  V          KPN  TL + L GC 
Sbjct: 361 TVIVAGYAQDGQGEKAVKCFIQMQ-------REGV----------KPNEFTLASSLSGCS 403

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            ++ L  G+++H+ AI+   + D+ V SALVDMYAKCGC+  A  VFD +  R+ ++WN 
Sbjct: 404 RIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNT 463

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II  Y  HG+G + L+  + M+ EG+      P+EVTFI + +ACSH G++ EG   F  
Sbjct: 464 IICGYSQHGQGGKALKAFEAMLDEGT-----VPDEVTFIGVLSACSHMGLIEEGKKHFNS 518

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           +   YGI P+ +HYAC+VD+LGRAGK  +    I  M         W ++LGAC++H N+
Sbjct: 519 LSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT-SNVLIWETVLGACKMHGNI 577

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           E GE AA  LF LEP++ S+Y+LLSN++++  +WD   +VR  M   GV+KEPGCSW+E 
Sbjct: 578 EFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEV 637

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
             ++H FL+ DGSH +  ++H  L++L +++   GY P+T  VLHNV++ EK+ LL  HS
Sbjct: 638 NGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHS 697

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           E+LA+AF +L+T    TIR+ KNLR+C DCH   K IS+I ++E+++RD+  FHHFKNG+
Sbjct: 698 ERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGS 757

Query: 876 CSCGDYW 882
           CSC ++W
Sbjct: 758 CSCQNFW 764



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 274/546 (50%), Gaps = 30/546 (5%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           + W + L S       +EA+  +  M  + I+ + F F +++ A A + D   G+ IHA 
Sbjct: 56  QQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHAC 115

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V KYG+  S + ++N  V MY K  S + + ++ F  +  ++  S N++++  C     D
Sbjct: 116 VCKYGFE-SDILISNAFVTMYMKTQS-VENGWQFFKAMMIENLASRNNLLSGFCDTETCD 173

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
                   +L    EP+ +T +S+   C++   +  L  G+ +HG  ++ G   ++ + N
Sbjct: 174 QGPRILIQLLVEGFEPNMYTFISILKTCAS---KGDLNEGKAIHGQVIKSGINPDSHLWN 230

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ +YAK G  + A  +F    +RD+VSW  +++     + +   +    QM   G  P
Sbjct: 231 SLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNP 289

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +  S+L +CS L  +D GK++HA  ++N  L  N FVG+ALVDMY   R +E    +
Sbjct: 290 NMYTFISILRSCSSLSDVDLGKQVHAQIVKNS-LDGNDFVGTALVDMYAKNRFLEDAETI 348

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  + +  W  ++ GY Q+   E+A+  FI+M+   G+ PN  T++S +  C R   
Sbjct: 349 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR-EGVKPNEFTLASSLSGCSRIAT 407

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +H  AIK G   D +V +AL+DMY++ G +E ++ +FD +  RDTVSWNT+I G
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y+  GQ G AL     M              LDE  +   P+ +T + VL  C  +  + 
Sbjct: 468 YSQHGQGGKALKAFEAM--------------LDEGTV---PDEVTFIGVLSACSHMGLIE 510

Query: 522 KGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIM 578
           +GK+ H  ++  +      +   + +VD+  + G  +      + M +  NV+ W  ++ 
Sbjct: 511 EGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 569

Query: 579 AYGMHG 584
           A  MHG
Sbjct: 570 ACKMHG 575


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 292/772 (37%), Positives = 437/772 (56%), Gaps = 35/772 (4%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAVAGIQ 91
           LP     C   W   +R    +  +R A+L Y++M    S   PD+  FP V+K+ A + 
Sbjct: 101 LPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            ++LG+ +H      G     + V + L+ MY   G  +WD  +VFD + E+D V WN M
Sbjct: 161 AIALGRLVHRTARTLGLD-GDMFVGSALIKMYAN-GGLLWDARQVFDGMAERDCVLWNVM 218

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +    + G    A+E F  M  S  EP+  TL   A   S  +    L  G Q+H  +++
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATL---ACFLSVSATESDLFFGVQLHTLAVK 275

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G E    + N L++MYAK   +DD   LF      DLV+WN ++S   QN    +A++ 
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLL 335

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M   GI+PD V++ S+LPA + L   + GKE+H Y +RN + +D  F+ SALVD+Y 
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD-VFLVSALVDIYF 394

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            CR V   + V+D      + + + MI+GY  N   +EA+ +F  + E  G+ PNA  ++
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIA 453

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           SV+PAC    A    + +H +A+K       YV++ALMDMY++ GR+++S  IF  +  +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V+WN+MI+ +   G+  +AL L REM  ME  K  N                +T+ +V
Sbjct: 514 DEVTWNSMISSFAQNGEPEEALNLFREM-CMEGVKYSN----------------VTISSV 556

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C +L A+  GKEIH   I+  +  D+   SAL+DMY KCG L +A RVF+ MP +N 
Sbjct: 557 LSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++WN II +YG +G  +E + LL++M  EG      K + VTF+AL +AC+H+G V EG+
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEG-----FKADHVTFLALVSACAHAGQVQEGL 671

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            LF  M ++Y I P  +H+AC+VDL  RAGK++ A +LI  MP + D AG W +LL ACR
Sbjct: 672 RLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPD-AGIWGALLHACR 730

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H+NVE+ EIA+Q LF L+P  + +YVL+SNI + A  WD    VR+ MK+  V+K PG 
Sbjct: 731 VHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGY 790

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV--PDTSCVLH 800
           SW++  +  H F+A D SH  SE ++  L+++   +R+EGY+  PD  C  H
Sbjct: 791 SWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIPMPDLCCPTH 842



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 316/623 (50%), Gaps = 57/623 (9%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY--GKCGSDMWDVYKVFDR 139
           AVL+       LSLG Q+H   V  G   +   +   LV MY   +   D   V+    R
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRR 196
                 + WN +I  L   G +  AL  F + ++++     P S T   V  +C+ L   
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALG-- 160

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             + LGR VH  +  +G + + F+ +AL+ MYA  G + DA+ +F    +RD V WN ++
Sbjct: 161 -AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YALR 311
               +      AV     M   G +P+  ++A  L   +    L  G ++H     Y L 
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +++ + N+     LV MY  C+ ++ G ++F  +    +  WN MI+G  QN + ++AL+
Sbjct: 280 SEVAVANT-----LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF  M++ +G+ P++ T+ S++PA      F   + +HG+ ++  +  D ++ +AL+D+Y
Sbjct: 335 LFCDMQK-SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIY 393

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            +   + ++++++D  +  D V  +TMI+GY + G   +A+ + R              Y
Sbjct: 394 FKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFR--------------Y 439

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            L++ +   +PN++ + +VLP C +++A+  G+E+H+YA++N       V SAL+DMYAK
Sbjct: 440 LLEQGI---RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAK 496

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L+ +  +F  +  ++ +TWN +I ++  +GE +E L L + M  EG     VK + V
Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-----VKYSNV 551

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGI----EPSPDHYA--CVVDLLGRAGKVEDA 665
           T  ++ +AC+        +   Y  K+ +G+        D +A   ++D+ G+ G +E A
Sbjct: 552 TISSVLSACA-------SLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWA 604

Query: 666 YQLINMMPPEFDKAGAWSSLLGA 688
           +++   MP + +   +W+S++ +
Sbjct: 605 HRVFESMPEKNEV--SWNSIIAS 625



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 26/351 (7%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + +VL  C     L  G ++H  A+   +   ++ + + LV MY   R       VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 346 SDKKIAL---WNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEA 401
                A    WN +I G         AL+ ++KM    +   P++ T   VV +C    A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +H  A  LGL  D +V +AL+ MY+  G +  ++ +FD M  RD V WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G    A+ L  +M+    E                 PN  TL   L      S L 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCE-----------------PNFATLACFLSVSATESDLF 264

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G ++H  A++  L ++V V + LV MYAKC CL+   ++F LMP  +++TWN +I    
Sbjct: 265 FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCV 324

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
            +G   + L L  +M   G     ++P+ VT ++L  A +     ++G +L
Sbjct: 325 QNGFVDQALLLFCDMQKSG-----IRPDSVTLVSLLPALTDLNGFNQGKEL 370



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L+ VL GC + S L+ G ++H  A+   L ATD  + + LV MY        A  VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 566 P---VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           P       + WN +I    M G+ +  L     M A  S      P+  TF  +  +C+ 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPS---APLPDSHTFPYVVKSCAA 158

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ-----------LINM 671
            G ++ G  L ++     G++      + ++ +    G + DA Q           L N+
Sbjct: 159 LGAIALG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217

Query: 672 MPPEFDKAGAWSS 684
           M   + KAG+ SS
Sbjct: 218 MMDGYVKAGSVSS 230


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/754 (37%), Positives = 430/754 (57%), Gaps = 34/754 (4%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFDRI   D  ++N++I      G +  A++ +R ML   V P+ +T   V  ACS L 
Sbjct: 55  QVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALV 114

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               LR GR +H ++   G   + F+  AL+ +Y +  R   A+ +F     RD+V+WN 
Sbjct: 115 ---DLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++  + +  +  A+  L  M   G ++P+  ++ S+LP  +    L  G  IHAY LR 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 313 DILIDNS--FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
            +  +     +G+AL+DMY  C+++    RVF  +  +    W+A+I G+   +   EA 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF  M      + +AT+++S +  C           +H    K G+  D    N+L+ M
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ--NMEEEKNRN 488
           Y++ G I  +   FD++ V+DT+S+  +++G    G+  +A ++ ++MQ  NME      
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME------ 405

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                        P+  T+++++P C  L+AL  GK  H   I   LA +  + ++L+DM
Sbjct: 406 -------------PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDM 452

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKCG ++ +R+VFD MP R+V++WN +I  YG+HG G+E   L   M  +G       P
Sbjct: 453 YAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-----FAP 507

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           ++VTFI L AACSHSG+V+EG   F  M   YGI P  +HY C+VDLL R G +++AYQ 
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF 567

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP + D    W +LLGACRIH+N+++G+  ++ +  L P+   ++VLLSNI+S+A  
Sbjct: 568 IQSMPLKAD-VRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           +D+A +VR   K  G +K PG SWIE    +H F+ GD SH  S  ++  L+N+   ++K
Sbjct: 627 FDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
            GY  DTS VL ++ EEEKE  L  HSEKLAIAFG+L+     TI V KNLRVC DCH A
Sbjct: 687 LGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTA 746

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K+++ + +R II+RD  RFHHFKNG CSCG++W
Sbjct: 747 IKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 274/583 (46%), Gaps = 46/583 (7%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P    R   + I   R+ +    F  AI  Y  M R  + P+ + FP VLKA + + DL
Sbjct: 60  IPAPDARAYNALI---RAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDL 116

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G+ IHAH    G   + + V+  L+++Y +C +       VF ++  +D V+WN+M+A
Sbjct: 117 RAGRTIHAHAAAAGLH-TDLFVSTALIDLYIRC-ARFGPARNVFAKMPMRDVVAWNAMLA 174

Query: 154 TLCRFGKWDLAL-EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                G +  A+     M  +  + P++ TLVS+      L++   L  G  +H   LR 
Sbjct: 175 GYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSL---LPLLAQHGALFQGTSIHAYCLRA 231

Query: 213 ----GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
                E    I  AL+ MYAK  ++  A  +F     R+ V+W+ ++      D+  EA 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 269 MFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
              + M + G+      S+AS L  C+ L  L  G ++HA   ++ I  D +   ++L+ 
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT-ASNSLLS 350

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +      FD I+ K    + A+++G  QN   EEA ++F KM +   + P+  
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM-QACNMEPDIA 409

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM S++PAC    A    +  HG  I  GL  +  + N+L+DMY++ G+I++S+ +FD M
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWNTMI GY I G   +A  L   M+N                     P+ +T 
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFA-----------------PDDVTF 512

Query: 508 MTVLPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           + ++  C     + +GK       H Y I   +   +     +VD+ A+ G L+ A +  
Sbjct: 513 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFI 568

Query: 563 DLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
             MP++ +V  W  ++ A  +H     G++V  +++ +  EG+
Sbjct: 569 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 224/470 (47%), Gaps = 38/470 (8%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G++  A+ +F      D  ++N ++ + S    F  A+   R M    + P+  +   VL
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            ACS L  L  G+ IHA+A    +  D  FV +AL+D+Y  C      R VF  +  + +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTD-LFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAM+ GY  +     A+   + M++  GL PNA+T+ S++P   +  A      IH 
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 411 HAIKLGLGRDR---YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           + ++  L ++     +  AL+DMY++  ++  +  +F  M VR+ V+W+ +I G+ +C +
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +A  L ++M              L E +      S+   + L  C +L+ L  G ++H
Sbjct: 287 MTEAFNLFKDM--------------LVEGLCFLSATSVA--SALRVCASLADLHMGTQLH 330

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A   ++ +  D+   ++L+ MYAK G +N A   FD + V++ I++  ++     +G+ +
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH-----SGMVSEGMDLFYKMKDDYGI 642
           E   + K M A       ++P+  T ++L  ACSH      G  S G  +   +  +  I
Sbjct: 391 EAFLVFKKMQA-----CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             S      ++D+  + GK++ + Q+ + MP       +W++++    IH
Sbjct: 446 CNS------LIDMYAKCGKIDLSRQVFDKMPAR--DVVSWNTMIAGYGIH 487


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/841 (32%), Positives = 473/841 (56%), Gaps = 32/841 (3%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   +   +  E I  Y  M    ++ +  +   V+ +   ++D SLG+QI   V
Sbjct: 228  SWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQV 287

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K G   S + V N+L++M+G  G+  +  Y +F++I+E+D +SWNS++A   + G  + 
Sbjct: 288  IKSGLE-SKLAVENSLISMFGNMGNVDYANY-IFNQISERDTISWNSIVAAYAQNGHIEE 345

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +   F +M   + E +S T   V+   S L   D  + GR +HG  +++G +    + N 
Sbjct: 346  SSRIFNLMRRFHDEVNSTT---VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNT 402

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYA  GR ++A  +FK    +DL+SWN++++S   + + L+A+  L  M   G   +
Sbjct: 403  LLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVN 462

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             V+  S L AC   E  D G+ +H   + +  L DN  +G+ALV MY     +   RRV 
Sbjct: 463  YVTFTSALAACFSPEFFDKGRILHGLVVVSG-LFDNQIIGNALVSMYGKIGGMSTSRRVL 521

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC-VRSEA 401
              +  + +  WNA+I GY +NE  ++AL  F  +  V G+  N  T+ SV+ AC V  + 
Sbjct: 522  LQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLR-VEGVSANYITVVSVLSACLVPGDL 580

Query: 402  FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                + +H + +  G   D +V+N+L+ MY++ G +  S+ +F+ ++ R  ++WN ++  
Sbjct: 581  LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAA 640

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                G   + L L+ +M        R+    LD+          +    L     L+ L 
Sbjct: 641  NAHHGHGEEVLKLVSKM--------RSFGLSLDQ---------FSFSEGLSAAAKLAVLE 683

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            +G+++H  A++     D  + +A  DMY+KCG +    ++      R++ +WN++I A G
Sbjct: 684  EGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 743

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             HG  +EV E    M+  G     +KP  VTF++L  ACSH G+V +G+  +  +  D+G
Sbjct: 744  RHGYFEEVCETFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFG 798

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            +EP+ +H  CV+DLLGR+G++ +A   I+ MP + +    W SLL +C+IH++++ G  A
Sbjct: 799  LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASCKIHRDLDRGRKA 857

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            A+NL  LEP+  S +VL SN++++   W+   +VRK+M    ++K+  CSW++  D++  
Sbjct: 858  AENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 917

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
            F  GD +H Q+ +++  LE++ + +++ GYV DTS  L + +EE+KE  L  HSE+LA+A
Sbjct: 918  FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 977

Query: 822  FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            + +++TP G+T+R+ KNLR+C+DCH   KF+S++  R I+LRD  RFHHF++G CSC DY
Sbjct: 978  YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDY 1037

Query: 882  W 882
            W
Sbjct: 1038 W 1038



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 291/608 (47%), Gaps = 43/608 (7%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +HA  VK G    SV   NTL+NMY K G      Y +FD++  +++VSWN+M++ +
Sbjct: 77  GRALHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARY-LFDKMPVRNEVSWNTMMSGI 134

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG--LRLGRQVHGNSLRVG 213
            R G +   +E F+ M    ++PSSF + S+  AC     R G   R G QVHG   + G
Sbjct: 135 VRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACG----RSGSMFREGVQVHGFVAKSG 190

Query: 214 EW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
              + ++  A++ +Y   G V  ++ +F+   DR++VSW +++   S   +  E +   +
Sbjct: 191 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 250

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M   G++ +  S++ V+ +C  L+    G++I    +++  L     V ++L+ M+ N 
Sbjct: 251 SMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSG-LESKLAVENSLISMFGNM 309

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM----EEVAGLWPNATT 388
             V+    +F+ IS++    WN+++  Y QN + EE+  +F  M    +EV     N+TT
Sbjct: 310 GNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEV-----NSTT 364

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +S+++      +      GIHG  +K+G      V N L+ MY+  GR E +  +F  M 
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D +SWN+++  +   G+  DAL +L  M    +                   N +T  
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGK-----------------SVNYVTFT 467

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           + L  C +     KG+ +H   + + L  + ++G+ALV MY K G ++ +RRV   MP R
Sbjct: 468 SALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRR 527

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           +V+ WN +I  Y  + +  + L   + +  EG     V  N +T +++ +AC   G + E
Sbjct: 528 DVVAWNALIGGYAENEDPDKALAAFQTLRVEG-----VSANYITVVSVLSACLVPGDLLE 582

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
                +      G E        ++ +  + G +  +  L N +         W+++L A
Sbjct: 583 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR--SIITWNAILAA 640

Query: 689 CRIHQNVE 696
              H + E
Sbjct: 641 NAHHGHGE 648



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 250/513 (48%), Gaps = 44/513 (8%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ MY K GRV  A+ LF     R+ VSWNT++S + +   +LE + F ++M   GIK
Sbjct: 97  NTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIK 156

Query: 281 PDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           P    IAS++ AC     M   G ++H +  ++ +L D  +V +A++ +Y     V C R
Sbjct: 157 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSR 215

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--V 397
           +VF+ + D+ +  W +++ GY      EE + ++  M    G+  N  +MS V+ +C  +
Sbjct: 216 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG-EGVECNENSMSLVISSCGLL 274

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           + E+   +  I G  IK GL     V+N+L+ M+  MG ++ +  IF+ +  RDT+SWN+
Sbjct: 275 KDESLGRQ--IIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNS 332

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           ++  Y   G   ++  +   M+   +E                  NS T+ T+L   G +
Sbjct: 333 IVAAYAQNGHIEESSRIFNLMRRFHDE-----------------VNSTTVSTLLSVLGDV 375

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
                G+ IH   ++    + V V + L+ MYA  G    A  VF  MP +++I+WN ++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH-----SGMVSEGMDL 632
            ++   G   + L +L +M+  G        N VTF +  AAC        G +  G+ +
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGK-----SVNYVTFTSALAACFSPEFFDKGRILHGLVV 490

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
              + D+  I  +      +V + G+ G +  + +++  MP       AW++L+G    +
Sbjct: 491 VSGLFDNQIIGNA------LVSMYGKIGGMSTSRRVLLQMPRR--DVVAWNALIGGYAEN 542

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
           ++ +    A Q L +    V+++Y+ + ++ S+
Sbjct: 543 EDPDKALAAFQTLRV--EGVSANYITVVSVLSA 573



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 159/391 (40%), Gaps = 48/391 (12%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   +W   L + A      E +    +M    +  D F+F   L A A +  L  
Sbjct: 625 GLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEE 684

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+H   VK G+ L    + N   +MY KCG ++ +V K+      +   SWN +I+ L
Sbjct: 685 GQQLHGLAVKLGFELDCF-IFNAAADMYSKCG-EIGEVVKMLPPSVNRSLPSWNILISAL 742

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            R G ++   E F  ML   ++P   T VS+  ACS              HG  +  G  
Sbjct: 743 GRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS--------------HGGLVDQGL- 787

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
                 A   M AK   ++ A           +     ++  L ++ +  EA  F+ +M 
Sbjct: 788 ------AYYDMIAKDFGLEPA-----------IEHCICVIDLLGRSGRLAEAETFISKMP 830

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--- 332
           +   KP+ +   S+L +C     LD G++      + +   D+ FV S+  +M+      
Sbjct: 831 M---KPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSS--NMFATTGRW 885

Query: 333 REVECGRRVFDF--ISDKKIALWNAM---ITGYGQNEYDEEALM-LFIKMEEVAGLWPNA 386
            +VE  R+   F  I  K+   W  +   ++ +G  +      M ++ K+E++  L   +
Sbjct: 886 EDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKES 945

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
             ++    A   ++    +  +  H+ +L L
Sbjct: 946 GYVADTSQALQDTDEEQKEHNLWNHSERLAL 976



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 15/178 (8%)

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           G   ++    G+ +HA  ++ ++   V+  + L++MY K G +  AR +FD MPVRN ++
Sbjct: 67  GFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVS 126

Query: 573 WNVI---IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG-MVSE 628
           WN +   I+  G++ EG   +E  + M   G     +KP+     +L  AC  SG M  E
Sbjct: 127 WNTMMSGIVRVGLYLEG---MEFFQKMCDLG-----IKPSSFVIASLVTACGRSGSMFRE 178

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           G+ + +      G+         ++ L G  G V  + ++   MP       +W+SL+
Sbjct: 179 GVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLM 233


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 303/828 (36%), Positives = 461/828 (55%), Gaps = 42/828 (5%)

Query: 66   IEMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
            +E    +++P+ +   +++ A   + D  L L +Q+   + K G+ L  + V + LVN +
Sbjct: 338  MEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGF-LRDLYVGSALVNGF 396

Query: 124  GKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM--LYSNVEPSS 180
             + G  + D  K +F ++ +++ V+ N ++  L R  + + A + F+ M  L      S 
Sbjct: 397  ARYG--LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESL 454

Query: 181  FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKT 238
              L+S     SNL  ++G R G++VH    R G  +    I NAL+ MY K   +D+A +
Sbjct: 455  VVLLSTFTEFSNL--KEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACS 512

Query: 239  LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            +F+    +D VSWN+++S L  N++F EAV     M   G+ P   S+ S L +CS L  
Sbjct: 513  VFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGW 572

Query: 299  LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
            L  G++IH    +  + +D S V +AL+ +Y     +   ++VF  + +     WN+ I 
Sbjct: 573  LTLGRQIHGEGFKWGLDLDVS-VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631

Query: 359  GYGQNEYDE-EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
               + E    +AL  F++M + AG  PN  T  +++ A            IH   +K  +
Sbjct: 632  ALAKYEASVLQALKYFLEMMQ-AGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690

Query: 418  GRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLR 476
              D  ++NAL+  Y +  ++E  + IF  M E RD VSWN+MI+GY   G    A+ L+ 
Sbjct: 691  ADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVW 750

Query: 477  EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
             M    +                 K +  T  TVL  C +++ L +G E+HA A+R  L 
Sbjct: 751  PMMQRGQ-----------------KLDGFTFATVLSACASVATLERGMEVHACAVRACLE 793

Query: 537  TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            +DVVVGSALVDMYAKCG +++A R F+LMPVRN+ +WN +I  Y  HG GQ+ L++   M
Sbjct: 794  SDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRM 853

Query: 597  VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
               G       P+ VTF+ + +ACSH G+V EG   F  M + YG+ P  +H++C+VDLL
Sbjct: 854  KQHGQ-----SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLL 908

Query: 657  GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLLEPDVAS 714
            GRAG V+     I  MP +      W ++LGAC R + +N E+G+ AA+ L  LEP  A 
Sbjct: 909  GRAGDVKKIEDFIKTMPMD-PNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAV 967

Query: 715  HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            +YVLLSN++++   W+  ++ R  M++  V+K+ GCSW+   D +H F+AGD +H + E+
Sbjct: 968  NYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEK 1027

Query: 775  LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
            ++  L+ L  ++R  GYVP+T   L+++  E KE LL  HSEKLAIAF +L       IR
Sbjct: 1028 IYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIR 1086

Query: 835  VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            + KNLRVC DCH A K+ISKI  R+IILRD  RFHHF  G CSCGDYW
Sbjct: 1087 IMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 175/645 (27%), Positives = 303/645 (46%), Gaps = 40/645 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           EA   +  +  S + P++FA  + L+A    G   + LG QIHA + K    +S + ++N
Sbjct: 224 EACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP-CVSDMILSN 282

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            L++MY  C   + D ++VFD I  ++ V+WNS+I+  CR G    A + F +M    VE
Sbjct: 283 VLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVE 342

Query: 178 ----PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGR 232
               P+ +TL S+  A  +L+   GL L  Q+     + G   + ++ +AL+  +A+ G 
Sbjct: 343 LNLRPNEYTLCSLVTAACSLA-DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D AK +FK   DR+ V+ N ++  L++  +  EA    ++M    ++ +  S+  +L  
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLST 460

Query: 293 CSHLEMLDTGK----EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
            +    L  GK    E+HAY  R+ ++     +G+ALV+MY  C  ++    VF  +  K
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK 520

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WN+MI+G   NE  EEA+  F  M+   G+ P+  ++ S + +C           I
Sbjct: 521 DTVSWNSMISGLDHNERFEEAVSCFHTMKR-NGMVPSNFSVISTLSSCSSLGWLTLGRQI 579

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG   K GL  D  V NAL+ +Y+    I   + +F  M   D VSWN+ I    +    
Sbjct: 580 HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGA--LAKYE 637

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
              L  L+    M +   R              PN +T + +L    + S L  G +IHA
Sbjct: 638 ASVLQALKYFLEMMQAGWR--------------PNRVTFINILAAVSSFSVLGLGHQIHA 683

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQ 587
             ++  +A D  + +AL+  Y KC  +     +F  M   R+ ++WN +I  Y   G   
Sbjct: 684 LILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILH 743

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           + ++L+  M+  G      K +  TF  + +AC+    +  GM++ +       +E    
Sbjct: 744 KAMDLVWPMMQRGQ-----KLDGFTFATVLSACASVATLERGMEV-HACAVRACLESDVV 797

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
             + +VD+  + GK++ A +   +MP       +W+S++     H
Sbjct: 798 VGSALVDMYAKCGKIDYASRFFELMPVR--NIYSWNSMISGYARH 840



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 161/607 (26%), Positives = 291/607 (47%), Gaps = 54/607 (8%)

Query: 100 HAHVVKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           H H+  Y  G +  V   NTL+N+Y + G ++    K+FD + +K+ VSW+ +I+   + 
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIG-NLVSARKLFDEMPQKNLVSWSCLISGYTQN 219

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
              D A   F+ ++ S + P+ F + S   AC       G++LG Q+H    ++   +  
Sbjct: 220 RMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG-STGIKLGMQIHAFICKLPCVSDM 278

Query: 219 IM-NALMAMYAKL-GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           I+ N LM+MY+   G +DDA  +F   + R+ V+WN+I+S   +    + A      M +
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338

Query: 277 RGI----KPDGVSIAS-VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            G+    +P+  ++ S V  ACS  +      E     +     + + +VGSALV+ +  
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              ++C + +F  + D+     N ++ G  +    EEA  +F +M+++  +     + S 
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI----NSESL 454

Query: 392 VVPACVRSEAFPDKEG------IHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIF 444
           VV     +E    KEG      +H +  + GL   R  + NAL++MY +   I+ + ++F
Sbjct: 455 VVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVF 514

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             M  +DTVSWN+MI+G     +  +A+     M+       RN +           P++
Sbjct: 515 QLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMK-------RNGMV----------PSN 557

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            ++++ L  C +L  L  G++IH    +  L  DV V +AL+ +YA+   +N  ++VF  
Sbjct: 558 FSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQ 617

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           MP  + ++WN  I A   +     VL+ LK  +     G   +PN VTFI + AA S   
Sbjct: 618 MPEYDQVSWNSFIGALAKY--EASVLQALKYFLEMMQAGW--RPNRVTFINILAAVSSFS 673

Query: 625 MVSEG-----MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           ++  G     + L Y + DD  IE +      ++   G+  ++ED   + + M    D+ 
Sbjct: 674 VLGLGHQIHALILKYSVADDNAIENA------LLAFYGKCEQMEDCEIIFSRMSERRDEV 727

Query: 680 GAWSSLL 686
            +W+S++
Sbjct: 728 -SWNSMI 733



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 236/490 (48%), Gaps = 48/490 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F  N L+ +Y ++G +  A+ LF     ++LVSW+ ++S  +QN    EA    + + 
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 233

Query: 276 LRGIKPDGVSIASVLPACSHL--EMLDTGKEIHAYALR----NDILIDNSFVGSALVDMY 329
             G+ P+  ++ S L AC       +  G +IHA+  +    +D+++ N      L+ MY
Sbjct: 234 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSN-----VLMSMY 288

Query: 330 CNCR-EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF--IKMEEVA-GLWPN 385
            +C   ++   RVFD I  +    WN++I+ Y +      A  LF  ++ME V   L PN
Sbjct: 289 SDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPN 348

Query: 386 ATTMSSVV-PACVRSE-AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
             T+ S+V  AC  ++      E +     K G  RD YV +AL++ ++R G ++ +K I
Sbjct: 349 EYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 408

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F  M  R+ V+ N ++ G     Q  +A  + +EM+++ E                   N
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVE------------------IN 450

Query: 504 SITLMTVLPGCGALSALA----KGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFA 558
           S +L+ +L      S L     KG+E+HAY  R+ L    + +G+ALV+MY KC  ++ A
Sbjct: 451 SESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNA 510

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             VF LMP ++ ++WN +I     +   +E +     M     R G V P+  + I+  +
Sbjct: 511 CSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM----KRNGMV-PSNFSVISTLS 565

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           +CS  G ++ G  + +     +G++        ++ L      + +  ++   M PE+D+
Sbjct: 566 SCSSLGWLTLGRQI-HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM-PEYDQ 623

Query: 679 AGAWSSLLGA 688
             +W+S +GA
Sbjct: 624 V-SWNSFIGA 632



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 169/380 (44%), Gaps = 58/380 (15%)

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           S +  D   +H    K G   D +  N L+++Y R+G +  ++ +FD+M  ++ VSW+ +
Sbjct: 153 SSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCL 212

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL- 517
           I+GYT      +A  L + +              +   +L   PN   + + L  C    
Sbjct: 213 ISGYTQNRMPDEACSLFKGV--------------ISSGLL---PNHFAVGSALRACQQCG 255

Query: 518 -SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNV 575
            + +  G +IHA+  +    +D+++ + L+ MY+ C G ++ A RVFD +  RN +TWN 
Sbjct: 256 STGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNS 315

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF-AACSHSGMVSEGMDLFY 634
           II  Y   G+     +L   M  EG     ++PNE T  +L  AACS   +   G+ L  
Sbjct: 316 IISVYCRRGDAVSAFKLFSVMQMEGVE-LNLRPNEYTLCSLVTAACS---LADCGLVLLE 371

Query: 635 KMKDDYGIEPSP---DHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS--LLG 687
           +M     IE S    D Y  + +V+   R G ++ A  +   M   +D+     +  ++G
Sbjct: 372 QMLTR--IEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQM---YDRNAVTMNGLMVG 426

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
             R HQ  E  ++  +   L+E +  S  VLLS     + L           KE G RK 
Sbjct: 427 LARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNL-----------KE-GKRK- 473

Query: 748 PGCSWIEFGDEIHKFLAGDG 767
                   G E+H +L   G
Sbjct: 474 --------GQEVHAYLFRSG 485



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 18/229 (7%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S+ R + SW   +     S    +A+     M +   + D F F  VL A A +  L  G
Sbjct: 721 SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERG 780

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            ++HA  V+     S V V + LV+MY KCG   +   + F+ +  ++  SWNSMI+   
Sbjct: 781 MEVHACAVRACLE-SDVVVGSALVDMYAKCGKIDY-ASRFFELMPVRNIYSWNSMISGYA 838

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD----GLRLGRQVHGNSLRV 212
           R G    AL+ F  M      P   T V V  ACS++   D      +   +V+G S R+
Sbjct: 839 RHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRI 898

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE----DRDLVSWNTIVSS 257
             ++         M   LGR  D K +    +    D +++ W T++ +
Sbjct: 899 EHFS--------CMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGA 939


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 298/845 (35%), Positives = 467/845 (55%), Gaps = 37/845 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL-SLGKQIHAH 102
           +W   +R+  +     +A+  +  M    + P N  F AVL A +   +L   G++IH  
Sbjct: 66  TWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHG- 124

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V++     S   V+ TL++MYGKC S + D  KVFD I  K  V WN+MI    +    +
Sbjct: 125 VLRGTAMESDHYVSTTLLHMYGKCSS-VEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A++ F  ML   V+    T + V  ACS L   +  +L +            ++    A
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           L+  Y   G ++ A   F++F     +L+    +++  +Q +++ EA+   + M L G+K
Sbjct: 244 LVNFYGSCGDLEQA---FRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGR 339
            D ++  +VL ACS    L+ G+ IH +    +I  D     G+AL++MY  C  +E   
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF  +  + +  WN +I  +GQ+    EAL L + + ++ G+  +  +  + +P C  S
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHL-LHLMQLDGVKADKISFVNALPLCATS 417

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           EA      IH   ++ G+  D  + NA++DMY      + +  +F  M+VRD VSWN MI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMI 477

Query: 460 TGYTICGQ-HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           T Y    +   +AL+L ++MQ                 +    P+ I+ +  L  C A +
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQ-----------------LHGFMPDVISFVAALSACAAQA 520

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +LA+GK +H       L +++ V +A+++MYAK G L  AR++F  MP+ +VI+WN +I 
Sbjct: 521 SLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMIS 580

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A+  HG   +VL   + M  EG       PN+VTF+++ +ACSH G+V +G+ LF  +  
Sbjct: 581 AFAQHGHADQVLRFFRRMNHEGKL-----PNDVTFVSVVSACSHGGLVKDGVQLFVSLLH 635

Query: 639 DY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           D+  I P  +HY C+VDL+ RAGK++ A + I   P + D+    S++LGA ++H++VE 
Sbjct: 636 DFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRV-IHSTMLGASKVHKDVER 694

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
              +A++L  L PD ++ YV+LSN+Y      D+   +R+ M E  +RKEP  S I    
Sbjct: 695 ARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKR 754

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +H+F  GD ++ ++ ++   LE LS  M K GY PDT+ +LH+V +E+K+ LL  HSEK
Sbjct: 755 RVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEK 814

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LAIAFG+++T PGT++R+ KNLRVC DCH ATKFISKI  REI++RD  RFHHF NGTCS
Sbjct: 815 LAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCS 874

Query: 878 CGDYW 882
           CGDYW
Sbjct: 875 CGDYW 879



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 186/622 (29%), Positives = 310/622 (49%), Gaps = 38/622 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +L  VA  + L LGK++HA + K         + + LV MY  CGS + D    FDR
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPF-MGDLLVRMYVDCGS-LIDAKACFDR 58

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +D ++W  +I    + G  + AL  FR M    V P +   V+V  ACS  +  + L
Sbjct: 59  MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS--ADPELL 116

Query: 200 RLGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             GR++HG  LR    E + ++   L+ MY K   V+DA+ +F     + +V WN ++++
Sbjct: 117 EEGRRIHG-VLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK--EIHAYALRNDIL 315
            +Q D   +A+     M L G+K + ++   VL ACS L+ L+  K  ++      +D L
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D+SF  +ALV+ Y +C ++E   R F      ++ L  AMIT Y Q E  +EAL LF K
Sbjct: 236 HDSSF-ATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELF-K 292

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           +  + G+  +     +V+ AC       +   IHG   ++   R     NAL++MY + G
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCG 352

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E +  +F  M+ RD +SWNT+I  +    QH +AL LL  MQ             LD 
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQ-------------LDG 399

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                K + I+ +  LP C    ALAKG+ IH++ + + +  DV++ +A++DMY  C   
Sbjct: 400 V----KADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKST 455

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           + A RVF  M VR+ ++WN +I AY        E L L + M   G       P+ ++F+
Sbjct: 456 DDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHG-----FMPDVISFV 510

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A  +AC+    ++EG  L  ++++  G+E +      V+++  ++G +  A ++   MP 
Sbjct: 511 AALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGTLVLARKMFGKMP- 568

Query: 675 EFDKAGAWSSLLGACRIHQNVE 696
                 +W+ ++ A   H + +
Sbjct: 569 -LPDVISWNGMISAFAQHGHAD 589


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/761 (36%), Positives = 432/761 (56%), Gaps = 32/761 (4%)

Query: 126 CGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
           CG D+     +FD+I       +N++I      G          +      +P+++T   
Sbjct: 76  CG-DLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           V  ACS L     LR  R VH ++ R G   + F+  AL+ +YAK      A T+F+   
Sbjct: 135 VLKACSALL---DLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            RD+V+WN +++  + + K+ + +  L  M      P+  ++ ++LP  +    L  G+ 
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRA 250

Query: 305 IHAYALRNDILIDNS---FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           +HAY++R   L D+     VG+AL+DMY  C  +    RVF+ ++ +    W+A++ G+ 
Sbjct: 251 VHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFV 310

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
                 EA  LF  M      + + T+++S + AC         + +H    K GL  D 
Sbjct: 311 LCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDL 370

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
              N+L+ MY++ G I+ + T+FD M V+DTVS++ +++GY   G+  +A  + R+MQ  
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                  NV          +P+  T+++++P C  L+AL  GK  H   I   +A++  +
Sbjct: 431 -------NV----------QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSI 473

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +AL+DMYAKCG ++ +R++FD+MP R++++WN +I  YG+HG G+E   L  +M  +  
Sbjct: 474 CNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQA- 532

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                +P++VTFI L +ACSHSG+V+EG   F+ M   YGI P  +HY  +VDLL R G 
Sbjct: 533 ----CEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGF 588

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +++AYQ I  MP + D    W +LLGACR+H+N+++G+  +  +  L P+   ++VLLSN
Sbjct: 589 LDEAYQFIQGMPLKAD-VRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSN 647

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           I+S+A  +D+A +VR   KE G +K PGCSWIE    +H F+ GD SH QS +++  L+N
Sbjct: 648 IFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDN 707

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           +   + K GY  DTS VL +V EEEKE  L  HSEKLAIAFG+L      TI V KNLRV
Sbjct: 708 ILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRV 767

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K+++ +  R II+RD  RFHHFKNG CSCGD+W
Sbjct: 768 CGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 274/545 (50%), Gaps = 48/545 (8%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           QP+N+ FP VLKA + + DL   + +H H  + G   + + V+  LV++Y KC S     
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLH-ADLFVSTALVDVYAKCAS-FRHA 183

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
             VF R+  +D V+WN+M+A     GK+   +    +++  +  P++ TLV++      L
Sbjct: 184 ATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALL---PLL 239

Query: 194 SRRDGLRLGRQVHGNSLRVGEWN-----TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           ++   L  GR VH  S+R    +       +  AL+ MYAK G +  A  +F++   R+ 
Sbjct: 240 AQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNE 299

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRG---IKPDGVSIASVLPACSHLEMLDTGKEI 305
           V+W+ +V       + LEA    + M  +G   + P   S+AS L AC++L  L  GK++
Sbjct: 300 VTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQL 357

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           HA   ++ +  D +  G++L+ MY     ++    +FD +  K    ++A+++GY QN  
Sbjct: 358 HALLAKSGLHTDLT-AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGK 416

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            +EA  +F KM +   + P+  TM S++PAC    A    +  HG  I  G+  +  + N
Sbjct: 417 ADEAFRVFRKM-QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICN 475

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DMY++ GRI++S+ IFD M  RD VSWNTMI GY I G   +A  L  +M++   E 
Sbjct: 476 ALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACE- 534

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-----IHAYAIRNMLATDVV 540
                           P+ +T + ++  C     + +GK       H Y I   +   + 
Sbjct: 535 ----------------PDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI- 577

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNM 596
               +VD+ A+ G L+ A +    MP++ +V  W  ++ A  +H     G++V  +++ +
Sbjct: 578 ---GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQL 634

Query: 597 VAEGS 601
             EG+
Sbjct: 635 GPEGT 639


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/716 (38%), Positives = 409/716 (57%), Gaps = 39/716 (5%)

Query: 176 VEPSS--FTLVSVALA---CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKL 230
           ++PSS    L+SV      C+++S+       +Q H   LR    +  + ++ +  +  L
Sbjct: 2   IKPSSKCTKLISVDFLKTHCTSISKT------KQAHALLLRTHLLHNPLFSSKLISFLAL 55

Query: 231 ---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
              G ++ A+ LF   ++ D    NT++   +++    EAV     M  RG+  D  +  
Sbjct: 56  SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
            VL AC+ L  +  G+  H   L+N    D  FV +AL+  Y NC    C   VFD  + 
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSD-LFVINALIQFYHNCGSFGCACDVFDESTV 174

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  WN MI  +      E+A  L  +M ++  L P+  TM S+VPAC +       + 
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF 234

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H ++ +LGL  +  V NA++DMY +   IE ++ +F+ +  +D +SW +M++G    G 
Sbjct: 235 LHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 294

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL L ++MQ         N  +LDE         ITL+ VL  C    AL +GK IH
Sbjct: 295 FQEALALFQKMQL--------NKIELDE---------ITLVGVLSACAQTGALDQGKYIH 337

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
               +  +  D+V+ +ALVDMYAKCG ++ A +VF  M VRNV TWN +I    MHG G+
Sbjct: 338 LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGE 397

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           + + L   M  +     ++ P++VTFIAL  ACSH+G+V EG+ +F  MK+ + IEP  +
Sbjct: 398 DAISLFDQMEHD-----KLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRME 452

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY CVVDLL RA KV+DA   I  MP + +    W++LLGACR   + ++ E   + +  
Sbjct: 453 HYGCVVDLLCRARKVDDALAFIENMPIKANSV-LWATLLGACRSGGHFDLAEKIGRRVIE 511

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEPD    YV+LSN+Y+    WD A+ +RK+MK  G+ K PGCSWIE    IH+F+AGD 
Sbjct: 512 LEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDR 571

Query: 768 SHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
           SH Q+EQ++  +E ++ R+  +G +VP T+ VL ++ EEEKE  L  HSEKLAIA G+++
Sbjct: 572 SHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLIS 631

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TP G+ IR+ KNLRVCNDCH   K  SK+ +REI+ RD  RFHHFK G+CSC D+W
Sbjct: 632 TPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 220/428 (51%), Gaps = 16/428 (3%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  ARS    EA+  Y  M    +  DN+ +P VL A A +  + LG++ H  V+K G+
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           G S + V N L+  Y  CGS       VFD  T +D V+WN MI      G  + A +  
Sbjct: 143 G-SDLFVINALIQFYHNCGS-FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200

Query: 169 -RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
             M    N+ P   T+VS+  AC+ L     L  G+ +H  S  +G + N  + NA++ M
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLG---NLERGKFLHSYSKELGLDENLRVNNAILDM 257

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K   ++ A+ +F    ++D++SW +++S L+++  F EA+   ++M L  I+ D +++
Sbjct: 258 YCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITL 317

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
             VL AC+    LD GK IH    + +I  D   + +ALVDMY  C  ++   +VF  + 
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCD-LVLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + +  WNA+I G   + + E+A+ LF +ME    L P+  T  +++ AC  S A    E
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEH-DKLMPDDVTFIALLCAC--SHAGLVDE 433

Query: 407 GIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGY 462
           G+    A+K     +  +++   ++D+  R  +++ +    ++M ++ ++V W T++ G 
Sbjct: 434 GLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GA 492

Query: 463 TICGQHGD 470
              G H D
Sbjct: 493 CRSGGHFD 500



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 275/566 (48%), Gaps = 49/566 (8%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSM 151
           +S  KQ HA +++  + L +   ++ L++      S D+    K+F ++   D    N+M
Sbjct: 24  ISKTKQAHALLLR-THLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I    R      A+  +  M+   V   ++T   V  AC+ L     ++LGR+ H   L+
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG---AVKLGRRFHCEVLK 139

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   + F++NAL+  Y   G    A  +F     RD+V+WN ++++        +A   
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199

Query: 271 LRQMA-LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           L +M  L  ++PD V++ S++PAC+ L  L+ GK +H+Y+ +   L +N  V +A++DMY
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYS-KELGLDENLRVNNAILDMY 258

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
           C C ++E  + VF+ I +K +  W +M++G  ++ Y +EAL LF KM ++  +  +  T+
Sbjct: 259 CKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKM-QLNKIELDEITL 317

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             V+ AC ++ A    + IH    K  +  D  ++ AL+DMY++ G I+++  +F  M V
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRV 377

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+  +WN +I G  + G   DA+ L  +M++             D+ +    P+ +T + 
Sbjct: 378 RNVFTWNALIGGLAMHGHGEDAISLFDQMEH-------------DKLM----PDDVTFIA 420

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPV 567
           +L  C     + +G  +   A++N    +  +     +VD+  +   ++ A    + MP+
Sbjct: 421 LLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 479

Query: 568 R-NVITWNVIIMA--YGMHGEGQEVLELLKNMVAEGSRGGEVKPNE----VTFIALFAAC 620
           + N + W  ++ A   G H +  E +         G R  E++P+     V    L+A  
Sbjct: 480 KANSVLWATLLGACRSGGHFDLAEKI---------GRRVIELEPDSCGRYVMLSNLYAGV 530

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSP 646
           S        + L  +MK+  GIE +P
Sbjct: 531 SQW---DHALKLRKQMKNK-GIEKTP 552



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 49/268 (18%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   A+S  F+EA+  + +M  + I+ D      VL A A    L  GK IH  +
Sbjct: 281 SWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI 340

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            K+      + +   LV+MY KCGS D+    +VF R+  ++  +WN++I  L   G  +
Sbjct: 341 DKFEIN-CDLVLETALVDMYAKCGSIDL--ALQVFRRMRVRNVFTWNALIGGLAMHGHGE 397

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A+  F  M +  + P   T +++  ACS+                              
Sbjct: 398 DAISLFDQMEHDKLMPDDVTFIALLCACSH------------------------------ 427

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALR 277
                   G VD+   +F++ +++  +      +  +V  L +  K  +A+ F+  M   
Sbjct: 428 -------AGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP-- 478

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
            IK + V  A++L AC      D  ++I
Sbjct: 479 -IKANSVLWATLLGACRSGGHFDLAEKI 505


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/678 (38%), Positives = 399/678 (58%), Gaps = 26/678 (3%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +   +G  + A+ LF +    D  + +T++S+L+ +    EA+     +  RGIKPD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
                +   AC+        KE+H  A R  ++ D  FVG+AL+  Y  C+ VE  RRVF
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSD-VFVGNALIHAYGKCKCVEGARRVF 222

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  + +  W ++ + Y +  +  + + +F +M   +G+ PN  T+SS++PAC   +  
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW-SGVKPNPMTVSSILPACAELKDL 281

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IHG A++ G+  + +V +AL+ +Y++   +  ++ +FD M  RD VSWN ++T Y
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 463 TICGQHGDALMLLREMQN-----------------MEEEKNRNNVYDLDE-TVLRPKPNS 504
               ++     L  +M                   ME  ++   V    +   +  KPN 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           IT+ ++LP C     L  GKEIH Y  R+    D+   +AL+ MYAKCG LN +R VFD+
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  ++V+ WN +I+A  MHG G+E L L   M+        V+PN VTF  + + CSHS 
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLL-----SRVQPNSVTFTGVLSGCSHSR 516

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG+ +F  M  D+ +EP  +HY+CVVD+  RAG++ +AY+ I  MP E   A AW +
Sbjct: 517 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME-PTASAWGA 575

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL ACR+++NVE+ +I+A+ LF +EP+   +YV L NI  +A++W +A  VR  MKE G+
Sbjct: 576 LLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 635

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
            K PGCSW++ G+++H F+ GD S+ +S++++ FL+ L E+M+  GY PDT  VL ++++
Sbjct: 636 TKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 695

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           EEK   LC HSEKLA+AFGILN    +TIRV KNLR+C DCH A K++SK+    I++RD
Sbjct: 696 EEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRD 755

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHFKNG CSC D W
Sbjct: 756 SLRFHHFKNGNCSCKDLW 773



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 265/550 (48%), Gaps = 67/550 (12%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD I + D  + +++I+ L   G  + A++ +  +    ++P     ++ A AC+   
Sbjct: 119 QLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA--V 176

Query: 195 RRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
             D LR+ ++VH ++ R G   + F+ NAL+  Y K   V+ A+ +F     RD+VSW +
Sbjct: 177 SGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 235

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           + S   +     + +   R+M   G+KP+ ++++S+LPAC+ L+ L +GKEIH +A+R+ 
Sbjct: 236 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 295

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +++ N FV SALV +Y  C  V   R VFD +  + +  WN ++T Y +N+  E+   LF
Sbjct: 296 MVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354

Query: 374 IKM-------------------------EEVA---------GLWPNATTMSSVVPACVRS 399
           +KM                         EE           G  PN  T+SS++PAC  S
Sbjct: 355 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 414

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           E     + IH +  +     D     AL+ MY++ G + +S+ +FD M  +D V+WNTMI
Sbjct: 415 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 474

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
               + G   +AL L  +M                  + R +PNS+T   VL GC     
Sbjct: 475 IANAMHGNGKEALFLFDKM-----------------LLSRVQPNSVTFTGVLSGCSHSRL 517

Query: 520 LAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVII 577
           + +G +I     R+ L   D    S +VD+Y++ G LN A +    MP+    + W  ++
Sbjct: 518 VEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV-TFIALFAACSHSGMVSEGMDLFYKM 636
            A  ++      +EL K       +  E++PN    +++LF     + M SE   +   M
Sbjct: 578 AACRVYKN----VELAK---ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILM 630

Query: 637 KDDYGIEPSP 646
           K+  GI  +P
Sbjct: 631 KER-GITKTP 639



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 159/561 (28%), Positives = 259/561 (46%), Gaps = 83/561 (14%)

Query: 23  QPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPA 82
           QP  TT ++L             I +L +   SN   EAI  Y  +    I+PD   F A
Sbjct: 126 QPDPTTCSTL-------------ISALTTHGLSN---EAIKIYSSLQERGIKPDMPVFLA 169

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
             KA A   D    K++H    + G  +S V V N L++ YGKC   +    +VFD +  
Sbjct: 170 AAKACAVSGDALRVKEVHDDATRCGV-MSDVFVGNALIHAYGKCKC-VEGARRVFDDLVV 227

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D VSW S+ +   + G     ++ FR M +S V+P+  T+ S+  AC+ L     L+ G
Sbjct: 228 RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK---DLKSG 284

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +++HG ++R G   N F+ +AL+++YAK   V +A+ +F     RD+VSWN ++++  +N
Sbjct: 285 KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKN 344

Query: 262 DKFL-----------------------------------EAVMFLRQMALRGIKPDGVSI 286
            ++                                    EAV   R+M   G KP+ ++I
Sbjct: 345 KEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITI 404

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           +S+LPACS  E L  GKEIH Y  R+  + D +   +AL+ MY  C ++   R VFD + 
Sbjct: 405 SSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST-TALLYMYAKCGDLNLSRNVFDMMR 463

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  WN MI     +   +EAL LF KM  ++ + PN+ T + V+  C  S     +E
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKM-LLSRVQPNSVTFTGVLSGCSHSRLV--EE 520

Query: 407 GIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
           G+    I   +GRD  V+      + ++D+YSR GR+  +      M +  T S W  ++
Sbjct: 521 GVQ---IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL-------- 511
               +      A +  +++  +E     N V   +  V     +  + + +L        
Sbjct: 578 AACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITK 637

Query: 512 -PGCGALSALAKGKEIHAYAI 531
            PGC   S L  G ++H + +
Sbjct: 638 TPGC---SWLQVGNKVHTFVV 655



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 169/328 (51%), Gaps = 26/328 (7%)

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           S +G  L+ +  N  +    R++FD I        + +I+    +    EA+ ++  ++E
Sbjct: 98  SHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQE 157

Query: 379 VAGLWPNATTMSSVVPAC-VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             G+ P+     +   AC V  +A   KE +H  A + G+  D +V NAL+  Y +   +
Sbjct: 158 -RGIKPDMPVFLAAAKACAVSGDALRVKE-VHDDATRCGVMSDVFVGNALIHAYGKCKCV 215

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E ++ +FDD+ VRD VSW ++ + Y  CG     + + REM         + V       
Sbjct: 216 EGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM-------GWSGV------- 261

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KPN +T+ ++LP C  L  L  GKEIH +A+R+ +  ++ V SALV +YAKC  +  
Sbjct: 262 ---KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 318

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VFDLMP R+V++WN ++ AY  + E ++   L   M  +G     V+ +E T+ A+ 
Sbjct: 319 ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG-----VRADEATWNAVI 373

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             C  +G   E +++F KM+   G +P+
Sbjct: 374 GGCMENGRSEEAVEMFRKMQ-KMGFKPN 400


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 295/845 (34%), Positives = 465/845 (55%), Gaps = 48/845 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   + S    E +  Y  M +  +  +   F  V  +   ++D  LG Q+  H+
Sbjct: 264  SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 323

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            ++YG+   SV+VAN+L++M+    S     Y VFD + E D +SWN+MI+     G    
Sbjct: 324  IQYGFE-DSVSVANSLISMFSSFSSVEEACY-VFDHMNECDIISWNAMISAYAHHGLCRE 381

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +L  F  M + + E +S TL S+       S  D L+ GR +HG  +++G + N  I N 
Sbjct: 382  SLRCFHWMRHLHNETNSTTLSSLLSV---CSSVDNLKWGRGIHGLVVKLGLDSNVCICNT 438

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ +Y++ GR +DA+ +F++  +RDL+SWN++++   Q+ K L+ +  L ++   G   +
Sbjct: 439  LLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMN 498

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAY---ALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             V+ AS L ACS+ E L   K +HA    A  +D LI    VG+ALV MY     +   +
Sbjct: 499  HVTFASALAACSNPECLIESKIVHALIIVAGFHDFLI----VGNALVTMYGKLGMMMEAK 554

Query: 340  RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +V   +       WNA+I G+ +NE   EA+  +  + E  G+  N  TM SV+ AC   
Sbjct: 555  KVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE-KGIPANYITMVSVLGAC--- 610

Query: 400  EAFPD---KEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             + PD   K G  IH H +  G   D YV+N+L+ MY++ G +  S  IFD +  +  ++
Sbjct: 611  -SAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 669

Query: 455  WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            WN M+      G   +AL +  EM        RN   +LD+          +    L   
Sbjct: 670  WNAMVAANAHHGCGEEALKIFGEM--------RNVGVNLDQ---------FSFSGGLAAT 712

Query: 515  GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
              L+ L +G+++H   I+    +D+ V +A +DMY KCG ++   ++      R+ ++WN
Sbjct: 713  ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 772

Query: 575  VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++I A+  HG  Q+  E    M+  G      KP+ VTF++L +AC+H G+V EG+  + 
Sbjct: 773  ILISAFARHGCFQKARETFHEMLKLGP-----KPDHVTFVSLLSACNHGGLVDEGLAYYD 827

Query: 635  KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQ 693
             M  ++G+ P  +H  C++DLLGR+G++  A   I  MP P  D A  W SLL ACRIH 
Sbjct: 828  SMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA--WRSLLAACRIHG 885

Query: 694  NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
            N+E+    A++L  L+P   S YVL SN+ +++  W+   ++RK+M    ++K+P CSW+
Sbjct: 886  NLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWV 945

Query: 754  EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
            +  D++H F  G+  H Q+ ++   L  L +  ++ GYVPDTS  LH+++EE+KE  L  
Sbjct: 946  KLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWN 1005

Query: 814  HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
            HSE+LA+AFG++NTP  +T+R+ KNLRVC DCH   KF+S I  R+I+LRD  RFHHF  
Sbjct: 1006 HSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSG 1065

Query: 874  GTCSC 878
            G CSC
Sbjct: 1066 GKCSC 1070



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 265/545 (48%), Gaps = 35/545 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           FP  LK  + I     GK +HA  +     L  +   NTL+NMY K G+     Y VFD 
Sbjct: 99  FP--LKGFSEITSQMAGKALHAFCIVGSVNLG-IFQTNTLINMYSKFGNIEHARY-VFDE 154

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +++ SW++M++   R G ++ A+  F  M    VEP+ F + S+  ACS    R G 
Sbjct: 155 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACS----RSGY 210

Query: 200 RL--GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
               G QVHG  ++ G   + ++  AL+  Y  +G V +A+ LF+   D ++VSW +++ 
Sbjct: 211 MADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMV 270

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             S +    E +   ++M   G+  +  + A+V  +C  LE    G ++  + ++     
Sbjct: 271 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYG-FE 329

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D+  V ++L+ M+ +   VE    VFD +++  I  WNAMI+ Y  +    E+L  F  M
Sbjct: 330 DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 389

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
             +     N+TT+SS++  C   +      GIHG  +KLGL  +  + N L+ +YS  GR
Sbjct: 390 RHLHNE-TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGR 448

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
            E ++ +F  M  RD +SWN+M+  Y   G+  D L +L E+  M +  N          
Sbjct: 449 SEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNH--------- 499

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                   +T  + L  C     L + K +HA  I       ++VG+ALV MY K G + 
Sbjct: 500 --------VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMM 551

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A++V   MP  + +TWN +I   G H E +E  E +K       +G  +  N +T +++
Sbjct: 552 EAKKVLQTMPQPDRVTWNALI---GGHAENEEPNEAVKAYKLIREKG--IPANYITMVSV 606

Query: 617 FAACS 621
             ACS
Sbjct: 607 LGACS 611



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 180/712 (25%), Positives = 328/712 (46%), Gaps = 41/712 (5%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQ 98
           R + SW   L    R   + EA+  + +M    ++P+ F   +++ A +    ++  G Q
Sbjct: 158 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 217

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  VVK G  L  V V   LV+ YG  G  +++  K+F+ + + + VSW S++      
Sbjct: 218 VHGFVVKTGI-LGDVYVGTALVHFYGSIGL-VYNAQKLFEEMPDHNVVSWTSLMVGYSDS 275

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G     L  ++ M    V  +  T  +V  +C  L  +    LG QV G+ ++ G E + 
Sbjct: 276 GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQYGFEDSV 332

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + N+L++M++    V++A  +F    + D++SWN ++S+ + +    E++     M   
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 392

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             + +  +++S+L  CS ++ L  G+ IH   ++   L  N  + + L+ +Y      E 
Sbjct: 393 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRSED 451

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              VF  ++++ +  WN+M+  Y Q+    + L +  ++ ++ G   N  T +S + AC 
Sbjct: 452 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM-GKVMNHVTFASALAACS 510

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E   + + +H   I  G      V NAL+ MY ++G +  +K +   M   D V+WN 
Sbjct: 511 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 570

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I G+                   EE       Y L      P  N IT+++VL  C A 
Sbjct: 571 LIGGHA----------------ENEEPNEAVKAYKLIREKGIP-ANYITMVSVLGACSAP 613

Query: 518 SALAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
             L K G  IHA+ +     +D  V ++L+ MYAKCG LN +  +FD +  ++ ITWN +
Sbjct: 614 DDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAM 673

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           + A   HG G+E L++   M     R   V  ++ +F    AA ++  ++ EG  L + +
Sbjct: 674 VAANAHHGCGEEALKIFGEM-----RNVGVNLDQFSFSGGLAATANLAVLEEGQQL-HGL 727

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNV 695
               G E         +D+ G+ G++ D   ++ M+P   +++  +W+ L+ A   H   
Sbjct: 728 VIKLGFESDLHVTNAAMDMYGKCGEMHD---VLKMLPQPINRSRLSWNILISAFARHGCF 784

Query: 696 EIGEIAAQNLFLL--EPDVASHYVLLSNIYSSAQLWDKAMDVRKKM-KEMGV 744
           +        +  L  +PD  +   LLS   +   L D+ +     M +E GV
Sbjct: 785 QKARETFHEMLKLGPKPDHVTFVSLLSAC-NHGGLVDEGLAYYDSMTREFGV 835



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 253/524 (48%), Gaps = 33/524 (6%)

Query: 202 GRQVHGNSLRVGEWN--TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           G+ +H   + VG  N   F  N L+ MY+K G ++ A+ +F     R+  SW+T++S   
Sbjct: 113 GKALHAFCI-VGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYV 171

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDN 318
           +   + EAV    QM   G++P+G  +AS++ ACS    M D G ++H + ++  IL D 
Sbjct: 172 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD- 230

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            +VG+ALV  Y +   V   +++F+ + D  +  W +++ GY  +    E L ++ +M +
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+  N  T ++V  +C   E       + GH I+ G      V N+L+ M+S    +E
Sbjct: 291 -EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +FD M   D +SWN MI+ Y   G   ++L     M+++  E              
Sbjct: 350 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET------------- 396

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
               NS TL ++L  C ++  L  G+ IH   ++  L ++V + + L+ +Y++ G    A
Sbjct: 397 ----NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 452

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             VF  M  R++I+WN ++  Y   G+  + L++L  ++  G        N VTF +  A
Sbjct: 453 ELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK-----VMNHVTFASALA 507

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           ACS+   + E   + + +    G          +V + G+ G + +A +++  M P+ D+
Sbjct: 508 ACSNPECLIES-KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM-PQPDR 565

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
              W++L+G     +N E  E       + E  + ++Y+ + ++
Sbjct: 566 V-TWNALIGGHA--ENEEPNEAVKAYKLIREKGIPANYITMVSV 606



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 9/177 (5%)

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L G   +++   GK +HA+ I   +   +   + L++MY+K G +  AR VFD M  RN 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG-MVSEG 629
            +W+ ++  Y   G  +E + L   M   G     V+PN     +L  ACS SG M  EG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLG-----VEPNGFMVASLITACSRSGYMADEG 215

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             + +      GI         +V   G  G V +A +L   MP       +W+SL+
Sbjct: 216 FQV-HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH--NVVSWTSLM 269


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/734 (36%), Positives = 417/734 (56%), Gaps = 93/734 (12%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F  N +++ YAK GR+++A  +F+   + D VSW  ++   +Q  +F  A+   R+M 
Sbjct: 78  SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCNCR 333
              + P   ++ +VL +C+ +E L  G+++H++ +++ +   +S+  V ++L++MY    
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGL---SSYISVANSLLNMYAKSG 194

Query: 334 EVECGRRVFDFIS-------------------------------DKKIALWNAMITGYGQ 362
           +    + VFD +                                ++ +  WNAMI+GY Q
Sbjct: 195 DPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQ 254

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           + +D EAL +F KM   +   P+  T++S + AC   E     + IH H I+        
Sbjct: 255 HGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGA 314

Query: 423 VQNALMDMYSRMGRIEI---------------------------------SKTIFDDMEV 449
           V NAL+ MYS+ G +EI                                 ++ IFD + V
Sbjct: 315 VGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRV 374

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD V+W  MI GY   G + DA+ L R M  ++E                PKPN+ TL T
Sbjct: 375 RDVVAWTAMIVGYVQNGFNQDAMELFRSM--IKEG---------------PKPNNYTLAT 417

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VR 568
           +L    +L++L  G++IHA A R+  A+ V V +AL+ MYAK G +N AR VF+L+   R
Sbjct: 418 MLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKR 477

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + ITW  +I+A   HG G+E L L + M+  G     +KP+ +T++ + +AC+H G+V +
Sbjct: 478 DTITWTSMIIALAQHGLGEEALTLFERMLENG-----IKPDHITYVGVLSACTHVGLVEQ 532

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   +  M++ + I P+P HYAC++DL GRAG +++A+  I  MP E D   AW SLL +
Sbjct: 533 GRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVI-AWGSLLAS 591

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C++H+NVE+ E+AA+ L L+EP+ +  Y  L+N+YS+   W+ A ++RK MK+ GV+K+ 
Sbjct: 592 CKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQ 651

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SW++  +++H F   DG H Q + ++  +  + + ++K G+VPDT  VLH++ EE KE
Sbjct: 652 GFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKE 711

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            +L  HSEKLAIAFG++ TP  TT+R+ KNLRVCNDCH A KFISK+  REII+RD  RF
Sbjct: 712 QILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRF 771

Query: 869 HHFKNGTCSCGDYW 882
           HHFKNG CSC DYW
Sbjct: 772 HHFKNGLCSCRDYW 785



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 156/607 (25%), Positives = 275/607 (45%), Gaps = 130/607 (21%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG---------SDM 130
           + + L+     +D   GK IHA ++K G  L  V + N L+N Y K G          +M
Sbjct: 16  YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLG-VFLMNNLMNFYAKTGFIYDAHRVFDEM 74

Query: 131 -------WDV--------------YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                  W++              ++VF+ + E D VSW +MI    + G+++ A+  FR
Sbjct: 75  PVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFR 134

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYA 228
            M+  +V P+ FTL +V  +C+ +   + L +GR+VH   ++ G  +   + N+L+ MYA
Sbjct: 135 EMVSDDVPPTQFTLTNVLASCAAV---ECLGIGRKVHSFVVKHGLSSYISVANSLLNMYA 191

Query: 229 KLGR-------------------------------VDDAKTLFKSFEDRDLVSWNTIVSS 257
           K G                                VD A+  F+   +RD+VSWN ++S 
Sbjct: 192 KSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISG 251

Query: 258 LSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-- 314
            +Q+    EA+ +F + +     KPD  ++AS L AC++LE L  GK+IHA+ +R +   
Sbjct: 252 YNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDT 311

Query: 315 -----------------------LIDNSFVG-------SALVDMYCNCREVECGRRVFDF 344
                                  +I+ S +        +AL+D Y    ++   RR+FD 
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDS 371

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  W AMI GY QN ++++A+ LF  M +  G  PN  T+++++       +   
Sbjct: 372 LRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIK-EGPKPNNYTLATMLSVSSSLASLDH 430

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITGYT 463
              IH  A + G      V NAL+ MY++ G I  ++ +F+ +   RDT++W +MI    
Sbjct: 431 GRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G   +AL L   M              L+  +   KP+ IT + VL  C  +  + +G
Sbjct: 491 QHGLGEEALTLFERM--------------LENGI---KPDHITYVGVLSACTHVGLVEQG 533

Query: 524 KEIHAYAIRNML--ATDVVVGSA----LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           +  +     N++  A  ++   +    ++D++ + G L  A    + MP+  +VI W  +
Sbjct: 534 RSYY-----NLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSL 588

Query: 577 IMAYGMH 583
           + +  +H
Sbjct: 589 LASCKVH 595



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 237/498 (47%), Gaps = 102/498 (20%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +  QF  AI  + EM   D+ P  F    VL + A ++ L +G+++H+ V
Sbjct: 112 SWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG-----------------------------SDMWDVY 134
           VK+G   S ++VAN+L+NMY K G                             S + D+ 
Sbjct: 172 VKHGLS-SYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLA 230

Query: 135 KV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSN 192
           +V F+++ E+D VSWN+MI+   + G    AL+ F +M++ S+ +P  FTL S   AC+N
Sbjct: 231 QVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACAN 290

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAK--------------------- 229
           L   + L+LG+Q+H + +R  E++TF  + NAL++MY+K                     
Sbjct: 291 L---ENLKLGKQIHAHIIRT-EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDV 346

Query: 230 ------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                       LG ++ A+ +F S   RD+V+W  ++    QN    +A+   R M   
Sbjct: 347 IAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKE 406

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G KP+  ++A++L   S L  LD G++IHA A R+      S V +AL+ MY     +  
Sbjct: 407 GPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVS-VSNALITMYAKSGSIND 465

Query: 338 GRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            R VF+ I  K+  + W +MI    Q+   EEAL LF +M E  G+ P+  T   V+ AC
Sbjct: 466 ARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE-NGIKPDHITYVGVLSAC 524

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRY--VQNA------------LMDMYSRMGRIEISKT 442
                         H   +  GR  Y  +QNA            ++D++ R G ++ +  
Sbjct: 525 T-------------HVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHA 571

Query: 443 IFDDMEVR-DTVSWNTMI 459
             ++M +  D ++W +++
Sbjct: 572 FIENMPIEPDVIAWGSLL 589



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 61/324 (18%)

Query: 398 RSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           RS  F D    + IH   IK GL    ++ N LM+ Y++ G I  +  +FD+M V+   S
Sbjct: 22  RSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFS 81

Query: 455 WNTMITGYTICGQHGDALMLLREMQN--------MEEEKNRNNVYDLDETVLRP------ 500
           WN +++GY   G+  +A  +  EM          M    N+   ++    + R       
Sbjct: 82  WNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDV 141

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P   TL  VL  C A+  L  G+++H++ +++ L++ + V ++L++MYAK G    A+ 
Sbjct: 142 PPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKI 201

Query: 561 VFDLMPV-------------------------------RNVITWNVIIMAYGMHGEGQEV 589
           VFD M +                               R+V++WN +I  Y  HG  +E 
Sbjct: 202 VFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L++   M+ + S     KP++ T  +  +AC++   +  G  +   +     I    D +
Sbjct: 262 LDIFSKMLMDSSS----KPDKFTLASALSACANLENLKLGKQIHAHI-----IRTEFDTF 312

Query: 650 ACV----VDLLGRAGKVEDAYQLI 669
             V    + +  ++G VE A ++I
Sbjct: 313 GAVGNALISMYSKSGGVEIAQKII 336



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 123/245 (50%), Gaps = 11/245 (4%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           ++A+  +  M +   +P+N+    +L   + +  L  G+QIHA   + G   SSV+V+N 
Sbjct: 394 QDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG-NASSVSVSNA 452

Query: 119 LVNMYGKCGSDMWDVYKVFDRIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+ MY K GS + D   VF+ I  ++D ++W SMI  L + G  + AL  F  ML + ++
Sbjct: 453 LITMYAKSGS-INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK 511

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAK 237
           P   T V V  AC+++   +  R    +  N+ ++    +     ++ ++ + G + +A 
Sbjct: 512 PDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA-CMIDLFGRAGLLQEAH 570

Query: 238 TLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG----VSIASVLPA 292
              ++   + D+++W ++++S   +     A +   ++ L  I+P+      ++A+V  A
Sbjct: 571 AFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLL--IEPENSGAYSALANVYSA 628

Query: 293 CSHLE 297
           C   E
Sbjct: 629 CGQWE 633


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/688 (39%), Positives = 395/688 (57%), Gaps = 31/688 (4%)

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           LR G+Q+H   +  G    TF+ N L+ MY+K G +D A  LF +   R+LVSW  ++S 
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           LSQN KF EA+     M + G  P   + +S + AC+ L  ++ GK++H  AL+  I   
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG-S 139

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM- 376
             FVGS L DMY  C  +    +VF+ +  K    W AMI GY +    EEAL+ F KM 
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199

Query: 377 -EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
            EEV     +   + S + AC   +A      +H   +KLG   D +V NAL DMYS+ G
Sbjct: 200 DEEVT---IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256

Query: 436 RIEISKTIFD-DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            +E +  +F  D E R+ VS+  +I GY    Q    L +  E++    E          
Sbjct: 257 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE---------- 306

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  PN  T  +++  C   +AL +G ++HA  ++     D  V S LVDMY KCG 
Sbjct: 307 -------PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L  A + FD +     I WN ++  +G HG G++ +++ + MV  G     VKPN +TFI
Sbjct: 360 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG-----VKPNAITFI 414

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L   CSH+G+V EG+D FY M   YG+ P  +HY+CV+DLLGRAG++++A + IN MP 
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E +  G W S LGACRIH + E+G++AA+ L  LEP  +   VLLSNIY++ + W+    
Sbjct: 475 EPNAFG-WCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRS 533

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR +M++  V+K PG SW++ G + H F A D SH +   ++  L+ L ++++  GYVP 
Sbjct: 534 VRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPR 593

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  V  ++++  KE LL  HSE++A+AF +++ P G  I V KNLRVC DCH A KFISK
Sbjct: 594 TDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISK 653

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  R+II+RD  RFHHF +G+CSCGDYW
Sbjct: 654 VTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 259/522 (49%), Gaps = 40/522 (7%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D  A   V++  A  + L  GKQ+HA ++  GY   +  + N LVNMY KCG ++    K
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTF-LTNHLVNMYSKCG-ELDHALK 61

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + +++ VSW +MI+ L +  K+  A+  F  M      P+ F   S   AC++L  
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG- 120

Query: 196 RDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              + +G+Q+H  +L+ G  +  F+ + L  MY+K G + DA  +F+    +D VSW  +
Sbjct: 121 --SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   S+  +F EA++  ++M    +  D   + S L AC  L+    G+ +H+  ++   
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLF 373
             D  FVG+AL DMY    ++E    VF   S+ + +  +  +I GY + E  E+ L +F
Sbjct: 239 ESD-IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           +++    G+ PN  T SS++ AC    A      +H   +K+    D +V + L+DMY +
Sbjct: 298 VELRR-QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNV 490
            G +E +   FD++     ++WN++++ +   GQHG   DA+ +   M            
Sbjct: 357 CGLLEQAIQAFDEIGDPTEIAWNSLVSVF---GQHGLGKDAIKIFERM------------ 401

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALV 546
             +D  V   KPN+IT +++L GC     + +G + + Y++       VV G    S ++
Sbjct: 402 --VDRGV---KPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTYG--VVPGEEHYSCVI 453

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           D+  + G L  A+   + MP   N   W   + A  +HG+ +
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 239/450 (53%), Gaps = 27/450 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++++F EAI ++  M      P  FAF + ++A A +  + +GKQ+H   
Sbjct: 73  SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G G S + V + L +MY KCG+ M+D  KVF+ +  KD+VSW +MI    + G+++ 
Sbjct: 133 LKFGIG-SELFVGSNLEDMYSKCGA-MFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL AF+ M+   V      L S   AC  L      + GR VH + +++G E + F+ NA
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALK---ACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 223 LMAMYAKLGRVDDAKTLFK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           L  MY+K G ++ A  +F    E R++VS+  ++    + ++  + +    ++  +GI+P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + +S++ AC++   L+ G ++HA  ++ +   ++ FV S LVDMY  C  +E   + 
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEQAIQA 366

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I D     WN++++ +GQ+   ++A+ +F +M +  G+ PNA T  S++  C  S A
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-RGVKPNAITFISLLTGC--SHA 423

Query: 402 FPDKEGI---HGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
              +EG+   +      G+  G + Y  + ++D+  R GR++ +K   + M    +   W
Sbjct: 424 GLVEEGLDYFYSMDKTYGVVPGEEHY--SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEK 485
            + +     C  HGD     +EM  +  EK
Sbjct: 482 CSFLGA---CRIHGD-----KEMGKLAAEK 503



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 70/390 (17%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +   ++ V+    +++     + +H   I  G     ++ N L++MYS+ G ++ +  +F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D M  R+ VSW  MI+G +   +  +A+     M+                 +    P  
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMR-----------------ICGEVPTQ 106

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
               + +  C +L ++  GK++H  A++  + +++ VGS L DMY+KCG +  A +VF+ 
Sbjct: 107 FAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEE 166

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS--- 621
           MP ++ ++W  +I  Y   GE +E L   K M+ E     EV  ++    +   AC    
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE-----EVTIDQHVLCSTLGACGALK 221

Query: 622 --------HSGMVSEGM-----------DLFYKMKD------DYGIEPSPDH---YACVV 653
                   HS +V  G            D++ K  D       +GI+    +   Y C++
Sbjct: 222 ACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLI 281

Query: 654 DLLGRAGKVEDAYQLI------NMMPPEFDKAGAWSSLLGACRIHQNVEIG-EIAAQNL- 705
           D      ++E    +        + P EF     +SSL+ AC     +E G ++ AQ + 
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEF----TFSSLIKACANQAALEQGTQLHAQVMK 337

Query: 706 --FLLEPDVASHYVLLSNIYSSAQLWDKAM 733
             F  +P V+S   +L ++Y    L ++A+
Sbjct: 338 INFDEDPFVSS---ILVDMYGKCGLLEQAI 364


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/601 (43%), Positives = 362/601 (60%), Gaps = 25/601 (4%)

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  + A  L +CS +  LD G+ + AYA++  ++ D  FV S+L+ MY +C +V   R V
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADR-FVLSSLIHMYASCGDVAAARLV 177

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD   +  + +WNA++  Y +N    E + +F  M EV G+  +  T+ SVV AC R   
Sbjct: 178 FDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEV-GVAFDEVTLVSVVTACGRIGD 236

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + + GH  + GL R+  +  ALMDMY++ G I  ++ +FD M+ RD V+W+ MI+G
Sbjct: 237 AKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISG 296

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           YT   Q  +AL L  EMQ                 + R +PN +T+++VL  C  L AL 
Sbjct: 297 YTQADQCREALGLFSEMQ-----------------LARVEPNDVTMVSVLSACAVLGALE 339

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK +H+Y  R  L+   ++G+ALVD YAKCGC++ A   F+ MPV+N  TW  +I    
Sbjct: 340 TGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMA 399

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +G G+E LEL  +M     R   ++P +VTFI +  ACSHS +V EG   F  M  DYG
Sbjct: 400 TNGRGREALELFSSM-----REAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYG 454

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I+P  +HY C+VDLLGRAG V++AYQ I  MP E   A  W +LL +C +H+NV IGE A
Sbjct: 455 IKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE-PNAVIWRALLSSCAVHRNVGIGEEA 513

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            + +  L P  +  YVLLSNIY+SA  W  A  VRK+MK+ G+ K PGCS IE    + +
Sbjct: 514 LKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFE 573

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F A D  H +  +++  +E +  R++  GYVP+T+ V   V E EKE  +  HSEKLAIA
Sbjct: 574 FFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIA 633

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG++   PG TIR++KNLRVC DCH ATK ISK+  REI++RD   FHHFK+GTCSC DY
Sbjct: 634 FGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDY 693

Query: 882 W 882
           W
Sbjct: 694 W 694



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 213/442 (48%), Gaps = 20/442 (4%)

Query: 33  PLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAVAGI 90
           P P   T C       +R+   +    +A+  +IEM    S    D       LK+ + +
Sbjct: 77  PRPPLSTPCYNVL---MRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRM 133

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
             L +G+ + A+ VK G  ++   V ++L++MY  CG D+     VFD   E   V WN+
Sbjct: 134 CALDVGRGVQAYAVKRGL-VADRFVLSSLIHMYASCG-DVAAARLVFDAAEESGVVMWNA 191

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           ++A   + G W   +E F+ ML   V     TLVSV  AC  +      +LG+ V G+  
Sbjct: 192 IVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIG---DAKLGKWVAGHVD 248

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
             G   N  ++ ALM MYAK G +  A+ LF   + RD+V+W+ ++S  +Q D+  EA+ 
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              +M L  ++P+ V++ SVL AC+ L  L+TGK +H+Y  R  + +  + +G+ALVD Y
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSL-TTILGTALVDFY 367

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  ++     F+ +  K    W A+I G   N    EAL LF  M E AG+ P   T 
Sbjct: 368 AKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRE-AGIEPTDVTF 426

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
             V+ AC  S    ++   H  ++    G    V++   ++D+  R G ++ +      M
Sbjct: 427 IGVLMACSHS-CLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTM 485

Query: 448 EVR-DTVSWNTMITGYTICGQH 468
            +  + V W  +++    C  H
Sbjct: 486 PIEPNAVIWRALLSS---CAVH 504


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 289/773 (37%), Positives = 431/773 (55%), Gaps = 44/773 (5%)

Query: 24  PPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFP 81
           P A   +SLP           W   +R    +     A+L Y++M    +   PD    P
Sbjct: 97  PRAAAGSSLP-----------WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLP 145

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
            V+K+ A +  +SLG+ +H      G   S V V + L+ MY   G  + D    FD + 
Sbjct: 146 YVVKSCAALGAVSLGRLVHRTARATGLA-SDVYVGSALIKMYSDAGL-LRDARDAFDGMP 203

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            +D V WN M+    + G    A+  FR M  S  EP+  TL      C+       L  
Sbjct: 204 WRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAA---EADLLS 260

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G Q+H  +++ G E    + N L++MYAK   +DDA  LF+     DLV+WN ++S   Q
Sbjct: 261 GVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQ 320

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N    EA+     M   G +PD V++ S+LPA + L  L  GKE+H Y +RN + +D +F
Sbjct: 321 NGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMD-AF 379

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           + SALVD+Y  CR+V   R ++D      + + + +I+GY  N   E+AL +F  + E  
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQC 439

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PNA T++SV+PAC    A P  + IHG+ ++       YV++ALMDMY++ GR+++S
Sbjct: 440 -IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             IF  M ++D V+WN+MI+ ++  G+  +AL L R+M  ME  K               
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQM-CMEGIKY-------------- 543

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
             N++T+ + L  C +L A+  GKEIH   I+  +  D+   SAL+DMYAKCG +  A R
Sbjct: 544 --NNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALR 601

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ MP +N ++WN II AYG HG  +E +  L  M  EG      KP+ VTF+AL +AC
Sbjct: 602 VFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEG-----YKPDHVTFLALISAC 656

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           +H+G+V EG+ LF  M  +Y I P  +H+AC+VDL  R+G+++ A Q I  MP + D AG
Sbjct: 657 AHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPD-AG 715

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W +LL ACR+H+NVE+ +IA+Q LF L+P  + +YVL+SNI + A  WD    VR+ MK
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMK 775

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           +  + K PG SW++  +  H F+A D SH +SE ++  L+ L + +R+EGYVP
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVP 828


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 297/845 (35%), Positives = 466/845 (55%), Gaps = 37/845 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL-SLGKQIHAH 102
           +W   +R+  +     +A+  +  M    + P N  F AVL A +   +L   G++IH  
Sbjct: 66  TWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHG- 124

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V++     S   V+ TL++MYGKC S + D  KVFD I  K  V WN+MI    +    +
Sbjct: 125 VLRGTAMESDHYVSTTLLHMYGKCSS-VEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A++ F  ML   V+    T + V  ACS L   +  +L +            ++    A
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           L+  Y   G ++ A   F++F     +L+    +++  +Q +++ EA+   + M L G+K
Sbjct: 244 LVNFYGSCGDLEQA---FRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGR 339
            D ++  +VL ACS    L+ G+ IH +    +I  D     G+AL++MY  C  +E   
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFM--REIRFDRHVNAGNALINMYGKCGSLEEAV 358

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF  +  + +  WN +I  +GQ+    EAL L + + ++ G+  +  +  + +P C  S
Sbjct: 359 EVFRSMQHRDVISWNTIIAAHGQHSQHPEALHL-LHLMQLDGVKADKISFVNALPLCAAS 417

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           EA      IH   ++ G+  D  + NA++DMY      + +  +F  M+ RD VSWN MI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMI 477

Query: 460 TGYTICGQ-HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           T Y    +   +AL+L ++MQ                 +    P+ I+ +  L  C A +
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQ-----------------LHGFMPDVISFVAALSACAAQA 520

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +LA+GK +H       L +++ V +A+++MYAK G L  AR++F  MP+ +VI+WN +I 
Sbjct: 521 SLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMIS 580

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A+  HG   +VL   + M  EG       PN+VTF+++ +ACSH G+V +G+ LF  +  
Sbjct: 581 AFAQHGHADQVLRFFRRMNHEGKL-----PNDVTFVSVVSACSHGGLVKDGVQLFVSLLH 635

Query: 639 DY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           D+  I P  +HY C+VDL+ RAGK++ A + I   P + D+    S++LGA ++H++VE 
Sbjct: 636 DFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRV-IHSTMLGASKVHKDVER 694

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
              +A++L  L PD ++ YV+LSN+Y      D+   +R+ M E  +RKEP  S I    
Sbjct: 695 ARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKR 754

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +H+F  GD ++ ++ ++   LE LS  M K GY PDT+ +LH+V +E+K+ LL  HSEK
Sbjct: 755 RVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEK 814

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LAIAFG+++T PGT++R+ KNLRVC DCH ATKFISKI  REI++RD  RFHHF NGTCS
Sbjct: 815 LAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCS 874

Query: 878 CGDYW 882
           CGDYW
Sbjct: 875 CGDYW 879



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 186/622 (29%), Positives = 310/622 (49%), Gaps = 38/622 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +L  VA  + L LGK++HA + K         + + LV MY  CGS + D    FDR
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPF-MGDLLVRMYVDCGS-LIDAKACFDR 58

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +D ++W  +I    + G  + AL  FR M    V P +   V+V  ACS  +  + L
Sbjct: 59  MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS--ADPELL 116

Query: 200 RLGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             GR++HG  LR    E + ++   L+ MY K   V+DA+ +F     + +V WN ++++
Sbjct: 117 EEGRRIHG-VLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK--EIHAYALRNDIL 315
            +Q D   +A+     M L G+K + ++   VL ACS L+ L+  K  ++      +D L
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D+SF  +ALV+ Y +C ++E   R F      ++ L  AMIT Y Q E  +EAL LF K
Sbjct: 236 HDSSF-ATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELF-K 292

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           +  + G+  +     +V+ AC       +   IHG   ++   R     NAL++MY + G
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCG 352

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E +  +F  M+ RD +SWNT+I  +    QH +AL LL  MQ             LD 
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQ-------------LDG 399

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                K + I+ +  LP C A  ALAKG+ IH++ + + +  DV++ +A++DMY  C   
Sbjct: 400 V----KADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKST 455

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           + A RVF  M  R+ ++WN +I AY        E L L + M   G       P+ ++F+
Sbjct: 456 DDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHG-----FMPDVISFV 510

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A  +AC+    ++EG  L  ++++  G+E +      V+++  ++G +  A ++   MP 
Sbjct: 511 AALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGSLVLARKMFGKMP- 568

Query: 675 EFDKAGAWSSLLGACRIHQNVE 696
                 +W+ ++ A   H + +
Sbjct: 569 -LPDVISWNGMISAFAQHGHAD 589


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/688 (39%), Positives = 394/688 (57%), Gaps = 31/688 (4%)

Query: 199 LRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           LR G+Q+H   +  G    TF+ N L+ MY+K G +D A  LF +   R+LVSW  ++S 
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           LSQN KF EA+     M + G  P   + +S + AC+ L  ++ GK++H  AL+  I   
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG-S 139

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM- 376
             FVGS L DMY  C  +    +VF+ +  K    W AMI GY +    EEAL+ F KM 
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199

Query: 377 -EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
            EEV     +   + S + AC   +A      +H   +KLG   D +V NAL DMYS+ G
Sbjct: 200 DEEVT---IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256

Query: 436 RIEISKTIFD-DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            +E +  +F  D E R+ VS+  +I GY    Q    L +  E++    E          
Sbjct: 257 DMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE---------- 306

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  PN  T  +++  C   +AL +G ++HA  ++     D  V S LVDMY KCG 
Sbjct: 307 -------PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L  A + FD +     I WN ++  +G HG G++ ++  + MV  G     VKPN +TFI
Sbjct: 360 LEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRG-----VKPNAITFI 414

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L   CSH+G+V EG+D FY M   YG+ P  +HY+CV+DLLGRAG++++A + IN MP 
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E +  G W S LGACRIH + E+G++AA+ L  LEP  +   VLLSNIY++ + W+    
Sbjct: 475 EPNAFG-WCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRS 533

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR +M++  V+K PG SW++ G + H F A D SH +   ++  L+ L ++++  GYVP 
Sbjct: 534 VRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPX 593

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  V  ++++  KE LL  HSE++A+AF +++ P G  I V KNLRVC DCH A KFISK
Sbjct: 594 TDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISK 653

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  R+II+RD  RFHHF +G+CSCGDYW
Sbjct: 654 VTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 258/522 (49%), Gaps = 40/522 (7%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D  A   V++  A  + L  GKQ+HA ++  GY   +  + N LVNMY KCG ++    K
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTF-LTNHLVNMYSKCG-ELDHALK 61

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + +++ VSW +MI+ L +  K+  A+  F  M      P+ F   S   AC++L  
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG- 120

Query: 196 RDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              + +G+Q+H  +L+ G  +  F+ + L  MY+K G + DA  +F+    +D VSW  +
Sbjct: 121 --SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   S+  +F EA++  ++M    +  D   + S L AC  L+    G+ +H+  ++   
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLF 373
             D  FVG+AL DMY    ++E    VF   S+ + +  +  +I GY + E  E+ L +F
Sbjct: 239 ESD-IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           +++    G+ PN  T SS++ AC    A      +H   +K+    D +V + L+DMY +
Sbjct: 298 VELRR-QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNV 490
            G +E +   FD++     ++WN++++ +   GQHG   DA+     M            
Sbjct: 357 CGLLEHAIQAFDEIGDPTEIAWNSLVSVF---GQHGLGKDAIKFFERM------------ 401

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALV 546
             +D  V   KPN+IT +++L GC     + +G + + Y++       VV G    S ++
Sbjct: 402 --VDRGV---KPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTYG--VVPGEEHYSCVI 453

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           D+  + G L  A+   + MP   N   W   + A  +HG+ +
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 238/450 (52%), Gaps = 27/450 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++++F EAI ++  M      P  FAF + ++A A +  + +GKQ+H   
Sbjct: 73  SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 132

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G G S + V + L +MY KCG+ M+D  KVF+ +  KD+VSW +MI    + G+++ 
Sbjct: 133 LKFGIG-SELFVGSNLEDMYSKCGA-MFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL AF+ M+   V      L S   AC  L      + GR VH + +++G E + F+ NA
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALK---ACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 223 LMAMYAKLGRVDDAKTLFK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           L  MY+K G ++ A  +F    E R++VS+  ++    + ++  + +    ++  +GI+P
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 307

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + +S++ AC++   L+ G ++HA  ++ +   ++ FV S LVDMY  C  +E   + 
Sbjct: 308 NEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEHAIQA 366

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I D     WN++++ +GQ+   ++A+  F +M +  G+ PNA T  S++  C  S A
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVD-RGVKPNAITFISLLTGC--SHA 423

Query: 402 FPDKEGI---HGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
              +EG+   +      G+  G + Y  + ++D+  R GR++ +K   + M    +   W
Sbjct: 424 GLVEEGLDYFYSMDKTYGVVPGEEHY--SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEK 485
            + +     C  HGD     +EM  +  EK
Sbjct: 482 CSFLGA---CRIHGD-----KEMGKLAAEK 503



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 169/390 (43%), Gaps = 70/390 (17%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +   ++ V+    +++     + +H   I  G     ++ N L++MYS+ G ++ +  +F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D M  R+ VSW  MI+G +   +  +A+     M+                 +    P  
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMR-----------------ICGEVPTQ 106

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
               + +  C +L ++  GK++H  A++  + +++ VGS L DMY+KCG +  A +VF+ 
Sbjct: 107 FAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEE 166

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS--- 621
           MP ++ ++W  +I  Y   GE +E L   K M+ E     EV  ++    +   AC    
Sbjct: 167 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE-----EVTIDQHVLCSTLGACGALK 221

Query: 622 --------HSGMVSEGM-----------DLFYKMKD------DYGIEPSPDH---YACVV 653
                   HS +V  G            D++ K  D       +GI+    +   Y C++
Sbjct: 222 ACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLI 281

Query: 654 DLLGRAGKVEDAYQLI------NMMPPEFDKAGAWSSLLGACRIHQNVEIG-EIAAQNL- 705
           D      ++E    +        + P EF     +SSL+ AC     +E G ++ AQ + 
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEF----TFSSLIKACANQAALEQGTQLHAQVMK 337

Query: 706 --FLLEPDVASHYVLLSNIYSSAQLWDKAM 733
             F  +P V+S   +L ++Y    L + A+
Sbjct: 338 INFDEDPFVSS---ILVDMYGKCGLLEHAI 364


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/782 (36%), Positives = 429/782 (54%), Gaps = 45/782 (5%)

Query: 122 MYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           + G C S  M D   +F+++ E++ VSW  MI+   R      A + F  M    + P  
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV-DDAKT 238
               S   A   L   D L   R +   +L+ G E +  I  A++ +Y++   V D A  
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVL---ALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            F+S  +R+  +W+T++++LS   +   A+    +  ++ I     ++ + L  C  ++ 
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR-TALITGLAQCGRID- 339

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
                   A  L   I        +AL+  Y     V   + +FD +  +    W  MI 
Sbjct: 340 -------DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY QN   EEAL L  ++   +G+ P+ ++++S+  AC    A      +H  A+K+G  
Sbjct: 393 GYAQNGRSEEALGLLQELHR-SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL------ 472
            + +  NAL+ MY +   +E ++ +F  M  +D VSWN+ +          D L      
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV----QNDLLDEARNT 507

Query: 473 ---MLLRE-------MQNMEEEKNRNNVYDLDETVL--RPKPNSITLMTVLPGCGALSAL 520
              ML R+       +      +  N      +T+      PNS  L  +L  CG+L A 
Sbjct: 508 FDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS 567

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G++IH  AI+  + ++++V +AL+ MY KCGC + +RR+FDLM  R++ TWN II  Y
Sbjct: 568 KIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGY 626

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG G+E +++ ++M + G     V PNEVTF+ L  ACSH+G+V EG   F  M  DY
Sbjct: 627 AQHGLGREAIKMYQHMESAG-----VLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDY 681

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G+ P P+HYAC+VDLLGR G V+ A Q I  MP E D    WS+LLGAC+IH+N EIG+ 
Sbjct: 682 GLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV-IWSALLGACKIHKNAEIGKR 740

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ LF +EP  A +YV+LSNIYSS  +W +  +VRK MK+ GV KEPGCSW +  D++H
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F+ GD  H+Q E++   LE L   ++  GYVPDT  VLH+++EE+KE+ L  HSEKLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           A+ +L TP G  I++ KNLR+C DCH   KF+S +  R+I +RD  RFHHF+NG+CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920

Query: 881 YW 882
           +W
Sbjct: 921 FW 922



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 262/572 (45%), Gaps = 62/572 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R     +A   + +M R  + PD   F + L AV G+ +L + + +    
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+    V +   ++N+Y +  S +    K F+ + E+++ +W++MIA L   G+ D 
Sbjct: 251 LKTGFE-RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  +      ++   +  +  +A       R D  R+  +      ++ E      NAL
Sbjct: 310 AIAVYERDPVKSIACRTALITGLA----QCGRIDDARILFE------QIPEPIVVSWNAL 359

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +  Y + G V++AK LF     R+ +SW  +++  +QN +  EA+  L+++   G+ P  
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            S+ S+  ACS++  L+TG ++H+ A++      NSF  +AL+ MY  CR +E  R+VF 
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQF-NSFACNALITMYGKCRNMEYARQVFS 478

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKM---------------------EEVAGL 382
            +  K I  WN+ +    QN+  +EA   F  M                      E  G 
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538

Query: 383 W---------PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           +         PN+  ++ ++  C    A    + IH  AIKLG+  +  V NAL+ MY +
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G  + S+ IFD ME RD  +WNT+ITGY    QHG     ++  Q+ME           
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGY---AQHGLGREAIKMYQHMESAG-------- 646

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKC 552
              VL   PN +T + +L  C     + +G +      ++   T +    A +VD+  + 
Sbjct: 647 ---VL---PNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           G +  A +    MP+  + + W+ ++ A  +H
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIH 732



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 248/582 (42%), Gaps = 93/582 (15%)

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V++ +G   V+  +  +   G+ G  + +  +VFD +  +D ++WNSMI+  C  G  D 
Sbjct: 25  VRHAHGELEVSGCSARIRDLGRLGR-VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDA 83

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
           A + +  +   N+   +  L                RLGR +    +  G  E NT   N
Sbjct: 84  ARDLYDAISGGNMRTGAILLSGYG------------RLGRVLEARRVFDGMLERNTVAWN 131

Query: 222 ALMAMYAKLGRVD-------------------------------DAKTLFKSFEDRDLVS 250
           A+++ Y + G +                                DA+ LF+   +R+LVS
Sbjct: 132 AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W  ++S   + +   +A     +M   G+ PD  + AS L A   L  LD  + +   AL
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251

Query: 311 RNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           +     D   +G+A++++Y     V +   + F+ + ++    W+ MI         + A
Sbjct: 252 KTGFERD-VVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310

Query: 370 LMLFIK--MEEVA---GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           + ++ +  ++ +A    L         +  A +  E  P+   +  +A+  G     Y+Q
Sbjct: 311 IAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG-----YMQ 365

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N         G +  +K +FD M  R+T+SW  MI GY   G+  +AL LL+E       
Sbjct: 366 N---------GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE------- 409

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                   L  + + P  +S+T  ++   C  + AL  G ++H+ A++     +    +A
Sbjct: 410 --------LHRSGMLPSLSSLT--SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ MY KC  + +AR+VF  M  +++++WN  + A   +    E      NM++      
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----- 514

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++V++  + +A +H+   +E M  F  M  ++ +  SP
Sbjct: 515 ----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 173/418 (41%), Gaps = 68/418 (16%)

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VFD +  + I  WN+MI+ Y  N   + A  L+   + ++G   N  T + ++    
Sbjct: 53  AREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---DAISG--GNMRTGAILLSGYG 107

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           R     +   +    ++    R+    NA++  Y + G I +++ +FD M  RD  SWN+
Sbjct: 108 RLGRVLEARRVFDGMLE----RNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNS 163

Query: 458 MITGYTICGQHGDALMLLREM------------QNMEEEKNRNNVYDL-----DETVLRP 500
           M+TGY    Q  DA  L  +M                  +N    +D+      E +L  
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK-CGCLNFAR 559
           + N  + ++ + G G L  L   + +   A++     DVV+G+A++++Y++    L+ A 
Sbjct: 224 QSNFASALSAVKGLGNLDVL---ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN-----------MVAEGSRGGEV-- 606
           + F+ M  RN  TW+ +I A    G     + + +            ++   ++ G +  
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD 340

Query: 607 ---------KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
                    +P  V++ AL      +GMV+E  +LF KM     I      +A ++    
Sbjct: 341 ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WAGMIAGYA 395

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           + G+ E+A  L+     E  ++G   SL     I         A  N+  LE     H
Sbjct: 396 QNGRSEEALGLLQ----ELHRSGMLPSLSSLTSIF-------FACSNIVALETGTQVH 442



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)

Query: 529 YAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           +A+R+      V G SA +    + G +  AR VFD MP R++I WN +I AY  +G   
Sbjct: 23  FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
              +L   +     R G +         L +     G V E   +F  M     +E +  
Sbjct: 83  AARDLYDAISGGNMRTGAI---------LLSGYGRLGRVLEARRVFDGM-----LERNTV 128

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLF 706
            +  ++    + G +  A +L + MP       +W+S+L G C   Q V+     A+NLF
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSR--DVSSWNSMLTGYCHSLQMVD-----ARNLF 181

Query: 707 --LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
             + E ++ S  V++S  Y   +   KA D+  KM   G+
Sbjct: 182 EKMPERNLVSWTVMISG-YGRIENHGKAWDIFCKMHREGL 220


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/782 (36%), Positives = 429/782 (54%), Gaps = 45/782 (5%)

Query: 122 MYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           + G C S  M D   +F+++ E++ VSW  MI+   R      A + F  M    + P  
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV-DDAKT 238
               S   A   L   D L   R +   +L+ G E +  I  A++ +Y++   V D A  
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVL---ALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            F+S  +R+  +W+T++++LS   +   A+    +  ++ I     ++ + L  C  ++ 
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACR-TALITGLAQCGRID- 339

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
                   A  L   I        +AL+  Y     V   + +FD +  +    W  MI 
Sbjct: 340 -------DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY QN   EEAL L  ++   +G+ P+ ++++S+  AC    A      +H  A+K+G  
Sbjct: 393 GYAQNGRSEEALGLLQELHR-SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL------ 472
            + +  NAL+ MY +   +E ++ +F  M  +D VSWN+ +          D L      
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV----QNDLLDEARNT 507

Query: 473 ---MLLRE-------MQNMEEEKNRNNVYDLDETVL--RPKPNSITLMTVLPGCGALSAL 520
              ML R+       +      +  N      +T+      PNS  L  +L  CG+L A 
Sbjct: 508 FDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS 567

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G++IH  AI+  + ++++V +AL+ MY KCGC + +RR+FDLM  R++ TWN II  Y
Sbjct: 568 KIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGY 626

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG G+E +++ ++M + G     V PNEVTF+ L  ACSH+G+V EG   F  M  DY
Sbjct: 627 AQHGLGREAIKMYQHMESAG-----VLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDY 681

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G+ P P+HYAC+VDLLGR G V+ A Q I  MP E D    WS+LLGAC+IH+N EIG+ 
Sbjct: 682 GLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV-IWSALLGACKIHKNAEIGKR 740

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ LF +EP  A +YV+LSNIYSS  +W +  +VRK MK+ GV KEPGCSW +  D++H
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F+ GD  H+Q E++   LE L   ++  GYVPDT  VLH+++EE+KE+ L  HSEKLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           A+ +L TP G  I++ KNLR+C DCH   KF+S +  R+I +RD  RFHHF+NG+CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920

Query: 881 YW 882
           +W
Sbjct: 921 FW 922



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 262/572 (45%), Gaps = 62/572 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R     +A   + +M R  + PD   F + L AV G+ +L + + +    
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+    V +   ++N+Y +  S +    K F+ + E+++ +W++MIA L   G+ D 
Sbjct: 251 LKTGFE-RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  +      ++   +  +  +A       R D  R+  +      ++ E      NAL
Sbjct: 310 AIAVYERDPVKSIACRTALITGLA----QCGRIDDARILFE------QIPEPIVVSWNAL 359

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +  Y + G V++AK LF     R+ +SW  +++  +QN +  EA+  L+++   G+ P  
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            S+ S+  ACS++  L+TG ++H+ A++      NSF  +AL+ MY  CR +E  R+VF 
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQF-NSFACNALITMYGKCRNMEYARQVFS 478

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKM---------------------EEVAGL 382
            +  K I  WN+ +    QN+  +EA   F  M                      E  G 
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538

Query: 383 W---------PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           +         PN+  ++ ++  C    A    + IH  AIKLG+  +  V NAL+ MY +
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G  + S+ IFD ME RD  +WNT+ITGY    QHG     ++  Q+ME           
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGY---AQHGLGREAIKMYQHMESAG-------- 646

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKC 552
              VL   PN +T + +L  C     + +G +      ++   T +    A +VD+  + 
Sbjct: 647 ---VL---PNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           G +  A +    MP+  + + W+ ++ A  +H
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIH 732



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/582 (22%), Positives = 248/582 (42%), Gaps = 93/582 (15%)

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V++ +G   V+  +  +   G+ G  + +  +VFD +  +D ++WNSMI+  C  G  D 
Sbjct: 25  VRHAHGELEVSGCSARIRDLGRLGR-VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDA 83

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
           A + +  +   N+   +  L                RLGR +    +  G  E NT   N
Sbjct: 84  ARDLYDAISGGNMRTGAILLSGYG------------RLGRVLEARRVFDGMLERNTVAWN 131

Query: 222 ALMAMYAKLGRVD-------------------------------DAKTLFKSFEDRDLVS 250
           A+++ Y + G +                                DA+ LF+   +R+LVS
Sbjct: 132 AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W  ++S   + +   +A     +M   G+ PD  + AS L A   L  LD  + +   AL
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251

Query: 311 RNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           +     D   +G+A++++Y     V +   + F+ + ++    W+ MI         + A
Sbjct: 252 KTGFERD-VVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310

Query: 370 LMLFIK--MEEVA---GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           + ++ +  ++ +A    L         +  A +  E  P+   +  +A+  G     Y+Q
Sbjct: 311 IAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG-----YMQ 365

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N         G +  +K +FD M  R+T+SW  MI GY   G+  +AL LL+E       
Sbjct: 366 N---------GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE------- 409

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                   L  + + P  +S+T  ++   C  + AL  G ++H+ A++     +    +A
Sbjct: 410 --------LHRSGMLPSLSSLT--SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ MY KC  + +AR+VF  M  +++++WN  + A   +    E      NM++      
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----- 514

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++V++  + +A +H+   +E M  F  M  ++ +  SP
Sbjct: 515 ----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP 552



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 173/418 (41%), Gaps = 68/418 (16%)

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VFD +  + I  WN+MI+ Y  N   + A  L+   + ++G   N  T + ++    
Sbjct: 53  AREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---DAISG--GNMRTGAILLSGYG 107

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           R     +   +    ++    R+    NA++  Y + G I +++ +FD M  RD  SWN+
Sbjct: 108 RLGRVLEARRVFDGMLE----RNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNS 163

Query: 458 MITGYTICGQHGDALMLLREM------------QNMEEEKNRNNVYDL-----DETVLRP 500
           M+TGY    Q  DA  L  +M                  +N    +D+      E +L  
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK-CGCLNFAR 559
           + N  + ++ + G G L  L   + +   A++     DVV+G+A++++Y++    L+ A 
Sbjct: 224 QSNFASALSAVKGLGNLDVL---ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAI 280

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN-----------MVAEGSRGGEV-- 606
           + F+ M  RN  TW+ +I A    G     + + +            ++   ++ G +  
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD 340

Query: 607 ---------KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
                    +P  V++ AL      +GMV+E  +LF KM     I      +A ++    
Sbjct: 341 ARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WAGMIAGYA 395

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           + G+ E+A  L+     E  ++G   SL     I         A  N+  LE     H
Sbjct: 396 QNGRSEEALGLLQ----ELHRSGMLPSLSSLTSIF-------FACSNIVALETGTQVH 442



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)

Query: 529 YAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           +A+R+      V G SA +    + G +  AR VFD MP R++I WN +I AY  +G   
Sbjct: 23  FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
              +L   +     R G +         L +     G V E   +F  M     +E +  
Sbjct: 83  AARDLYDAISGGNMRTGAI---------LLSGYGRLGRVLEARRVFDGM-----LERNTV 128

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLF 706
            +  ++    + G +  A +L + MP       +W+S+L G C   Q V+     A+NLF
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSR--DVSSWNSMLTGYCHSLQMVD-----ARNLF 181

Query: 707 --LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
             + E ++ S  V++S  Y   +   KA D+  KM   G+
Sbjct: 182 EKMPERNLVSWTVMISG-YGRIENHGKAWDIFCKMHREGL 220


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/678 (38%), Positives = 399/678 (58%), Gaps = 26/678 (3%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +   +G  + A+ LF +    D  + +T++S+L+ +    EA+     +  RGIKPD
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
                +   AC+        KE+H  A R  ++ D  FVG+AL+  Y  C+ VE  RRVF
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSD-VFVGNALIHAYGKCKCVEGARRVF 136

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  + +  W ++ + Y +  +  + + +F +M   +G+ PN  T+SS++PAC   +  
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW-SGVKPNPMTVSSILPACAELKDL 195

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IHG A++ G+  + +V +AL+ +Y++   +  ++ +FD M  RD VSWN ++T Y
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 463 TICGQHGDALMLLREMQN-----------------MEEEKNRNNVYDLDE-TVLRPKPNS 504
               ++     L  +M                   ME  ++   V    +   +  KPN 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           IT+ ++LP C     L  GKEIH Y  R+    D+   +AL+ MYAKCG LN +R VFD+
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  ++V+ WN +I+A  MHG G+E L L   M+        V+PN VTF  + + CSHS 
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLS-----RVQPNSVTFTGVLSGCSHSR 430

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG+ +F  M  D+ +EP  +HY+CVVD+  RAG++ +AY+ I  MP E   A AW +
Sbjct: 431 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME-PTASAWGA 489

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL ACR+++NVE+ +I+A+ LF +EP+   +YV L NI  +A++W +A  VR  MKE G+
Sbjct: 490 LLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 549

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
            K PGCSW++ G+++H F+ GD S+ +S++++ FL+ L E+M+  GY PDT  VL ++++
Sbjct: 550 TKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQ 609

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           EEK   LC HSEKLA+AFGILN    +TIRV KNLR+C DCH A K++SK+    I++RD
Sbjct: 610 EEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRD 669

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHFKNG CSC D W
Sbjct: 670 SLRFHHFKNGNCSCKDLW 687



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 265/550 (48%), Gaps = 67/550 (12%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD I + D  + +++I+ L   G  + A++ +  +    ++P     ++ A AC+   
Sbjct: 33  QLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA--V 90

Query: 195 RRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
             D LR+ ++VH ++ R G   + F+ NAL+  Y K   V+ A+ +F     RD+VSW +
Sbjct: 91  SGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 149

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           + S   +     + +   R+M   G+KP+ ++++S+LPAC+ L+ L +GKEIH +A+R+ 
Sbjct: 150 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 209

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +++ N FV SALV +Y  C  V   R VFD +  + +  WN ++T Y +N+  E+   LF
Sbjct: 210 MVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268

Query: 374 IKM-------------------------EEVA---------GLWPNATTMSSVVPACVRS 399
           +KM                         EE           G  PN  T+SS++PAC  S
Sbjct: 269 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 328

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           E     + IH +  +     D     AL+ MY++ G + +S+ +FD M  +D V+WNTMI
Sbjct: 329 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 388

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
               + G   +AL L  +M                  + R +PNS+T   VL GC     
Sbjct: 389 IANAMHGNGKEALFLFDKM-----------------LLSRVQPNSVTFTGVLSGCSHSRL 431

Query: 520 LAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVII 577
           + +G +I     R+ L   D    S +VD+Y++ G LN A +    MP+    + W  ++
Sbjct: 432 VEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV-TFIALFAACSHSGMVSEGMDLFYKM 636
            A  ++      +EL K       +  E++PN    +++LF     + M SE   +   M
Sbjct: 492 AACRVYKN----VELAK---ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILM 544

Query: 637 KDDYGIEPSP 646
           K+  GI  +P
Sbjct: 545 KER-GITKTP 553



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 159/561 (28%), Positives = 259/561 (46%), Gaps = 83/561 (14%)

Query: 23  QPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPA 82
           QP  TT ++L             I +L +   SN   EAI  Y  +    I+PD   F A
Sbjct: 40  QPDPTTCSTL-------------ISALTTHGLSN---EAIKIYSSLQERGIKPDMPVFLA 83

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
             KA A   D    K++H    + G  +S V V N L++ YGKC   +    +VFD +  
Sbjct: 84  AAKACAVSGDALRVKEVHDDATRCGV-MSDVFVGNALIHAYGKCKC-VEGARRVFDDLVV 141

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D VSW S+ +   + G     ++ FR M +S V+P+  T+ S+  AC+ L     L+ G
Sbjct: 142 RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK---DLKSG 198

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +++HG ++R G   N F+ +AL+++YAK   V +A+ +F     RD+VSWN ++++  +N
Sbjct: 199 KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKN 258

Query: 262 DKFL-----------------------------------EAVMFLRQMALRGIKPDGVSI 286
            ++                                    EAV   R+M   G KP+ ++I
Sbjct: 259 KEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITI 318

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           +S+LPACS  E L  GKEIH Y  R+  + D +   +AL+ MY  C ++   R VFD + 
Sbjct: 319 SSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST-TALLYMYAKCGDLNLSRNVFDMMR 377

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  WN MI     +   +EAL LF KM  ++ + PN+ T + V+  C  S     +E
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKM-LLSRVQPNSVTFTGVLSGCSHSRLV--EE 434

Query: 407 GIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
           G+    I   +GRD  V+      + ++D+YSR GR+  +      M +  T S W  ++
Sbjct: 435 GVQ---IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL-------- 511
               +      A +  +++  +E     N V   +  V     +  + + +L        
Sbjct: 492 AACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITK 551

Query: 512 -PGCGALSALAKGKEIHAYAI 531
            PGC   S L  G ++H + +
Sbjct: 552 TPGC---SWLQVGNKVHTFVV 569



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 169/328 (51%), Gaps = 26/328 (7%)

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           S +G  L+ +  N  +    R++FD I        + +I+    +    EA+ ++  ++E
Sbjct: 12  SHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQE 71

Query: 379 VAGLWPNATTMSSVVPAC-VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             G+ P+     +   AC V  +A   KE +H  A + G+  D +V NAL+  Y +   +
Sbjct: 72  -RGIKPDMPVFLAAAKACAVSGDALRVKE-VHDDATRCGVMSDVFVGNALIHAYGKCKCV 129

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E ++ +FDD+ VRD VSW ++ + Y  CG     + + REM         + V       
Sbjct: 130 EGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM-------GWSGV------- 175

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KPN +T+ ++LP C  L  L  GKEIH +A+R+ +  ++ V SALV +YAKC  +  
Sbjct: 176 ---KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 232

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VFDLMP R+V++WN ++ AY  + E ++   L   M  +G     V+ +E T+ A+ 
Sbjct: 233 ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG-----VRADEATWNAVI 287

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             C  +G   E +++F KM+   G +P+
Sbjct: 288 GGCMENGRSEEAVEMFRKMQ-KMGFKPN 314


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/723 (36%), Positives = 425/723 (58%), Gaps = 33/723 (4%)

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTL 239
           F+ +S ALA +  + +       ++H   + +G  ++ I +A L+A YA       + ++
Sbjct: 16  FSSISRALASAATTTQ-----LHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSV 70

Query: 240 FK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           F+ +    ++  WN+I+ +L+ N  F EA+    +     ++PD  +  SV+ AC+ L  
Sbjct: 71  FRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 130

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
            +  K IH   L      D  ++G+AL+DMYC   +++  R+VF+ +  + +  WN++I+
Sbjct: 131 FEMAKSIHDRVLDMGFGSD-LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLIS 189

Query: 359 GYGQNEYDEEALMLFIK-----MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           GY  N Y  EAL ++ +     ME V    P+  T++S++ AC         + +H + I
Sbjct: 190 GYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMI 249

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
             G   D    N L++MY++ G +  S+ +F  M+ +D+VSWN+MI  Y   G+ GD+L 
Sbjct: 250 TSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLK 309

Query: 474 LLREMQNME----EEKNRNNVYDLD-----ETVLRPK-----PNSITLMTVLPGCGALSA 519
           +   M+  +         + V+  D       + R +     P+  T++++LP C  L+A
Sbjct: 310 VFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAA 369

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
             +GKEIH    +  L +DV VG+ L++MY+KCG L  + +VF LM  ++V+TW  +I A
Sbjct: 370 KRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISA 429

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
            GM+GEG++ +     M A G     + P+ V F+A+  ACSHSG+V EG++ F++MK D
Sbjct: 430 CGMYGEGKKAVRAFGEMEAAG-----IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKD 484

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           Y IEP  +HYACVVDLL R+  ++ A   I  MP + D +  W +LL ACR+  + EI E
Sbjct: 485 YKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD-SSIWGALLSACRMSGDTEIAE 543

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
             ++ +  L PD   +YVL+SNIY++   WD+   +RK +K  G++K+PGCSW+E  +++
Sbjct: 544 RVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKV 603

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           + F  G    +Q E+++  L  L+  M KEGY+ +   VLH+++E+EK  +LCGHSE+LA
Sbjct: 604 YVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLA 663

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           IAFG+LNT PGT ++V KNLRVC DCH  TK+ISKI  RE+++RD  RFH FK+G CSCG
Sbjct: 664 IAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCG 723

Query: 880 DYW 882
           DYW
Sbjct: 724 DYW 726



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 239/505 (47%), Gaps = 54/505 (10%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM 68
           +++ S  L +   H    T++ S+    S +     W   +R+   +  F EA+  Y E 
Sbjct: 47  SVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSET 106

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            R  +QPD + FP+V+ A AG+ D  + K IH  V+  G+G S + + N L++MY +  +
Sbjct: 107 QRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG-SDLYIGNALIDMYCRF-N 164

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR------MMLYSNVEPSSFT 182
           D+    KVF+ +  +D VSWNS+I+     G W+ ALE +       M + +  +P   T
Sbjct: 165 DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLT 224

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG---------- 231
           + S+  AC +L     L  G+ VH   +  G E +T   N L+ MYAK G          
Sbjct: 225 ITSILQACGHLG---DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 281

Query: 232 ---------------------RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
                                ++ D+  +F++ + RD+++WNTI++S   ++     +  
Sbjct: 282 GMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 341

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           + +M   G+ PD  ++ S+LP CS L     GKEIH    +  +  D   VG+ L++MY 
Sbjct: 342 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP-VGNVLIEMYS 400

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +    +VF  +  K +  W A+I+  G     ++A+  F +M E AG+ P+     
Sbjct: 401 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM-EAAGIVPDHVAFV 459

Query: 391 SVVPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           +++ AC  S     +EG+ + H +K     +  +++   ++D+ SR   ++ ++     M
Sbjct: 460 AIIFACSHSGLV--EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 517

Query: 448 EVR-DTVSWNTMITGYTICGQHGDA 471
            ++ D+  W  +++    C   GD 
Sbjct: 518 PLKPDSSIWGALLSA---CRMSGDT 539


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/683 (37%), Positives = 406/683 (59%), Gaps = 28/683 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYAKL--GRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +QVH + L+     +  I  A++   A L    +D A ++F   +  +  ++N ++  L+
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
                  A++  ++M  + ++ D  + +SVL ACS ++ L  G+++HA  L++     N 
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSG-FKSNE 156

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           FV + L+ MY NC ++   R VFD + ++ I  WN+M++GY +N   +E + LF K+ E+
Sbjct: 157 FVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILEL 216

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             +  +  TM SV+ AC R       E I  + +  GL R+  +  +L+DMY++ G+++ 
Sbjct: 217 R-IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDT 275

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +FD+M+ RD V+W+ MI+GY    +  +AL L  EMQ       + NVY        
Sbjct: 276 ARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQ-------KGNVY-------- 320

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
             PN +T+++VL  C  L A   GK +H Y  +  +   V +G+ L+D YAKCG ++ + 
Sbjct: 321 --PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSV 378

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VF  M  +NV TW  +I     +GEG+  LE   +M+       +VKPN+VTFI + +A
Sbjct: 379 EVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE-----NDVKPNDVTFIGVLSA 433

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH+ +V +G  LF  M+ D+ IEP  +HY C+VD+LGRAG +E+AYQ I+ MP     A
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFP-PNA 492

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL +CR H+N+E+ E + +++  LEP  +  Y+LLSN Y+     + A+ VR  +
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLI 552

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           KE  ++K PGCS IE    +H+F + DG H+ S+++H  L+ + +++++ GYVP+T    
Sbjct: 553 KEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDAR 612

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
               EE KET +  HSEKLAIA+G++ T P TTIR++KNLR+C DCH ATKFIS++  R 
Sbjct: 613 LEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERM 672

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           II+RD  RFHHFK+G CSC DYW
Sbjct: 673 IIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 239/490 (48%), Gaps = 25/490 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+HAH++K    L  +     L +        +     +F+ I + +  ++N MI  L 
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                D AL  F+ M   +V+   FT  SV  AC   SR   LR G QVH   L+ G + 
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKAC---SRMKALREGEQVHALILKSGFKS 154

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+ N L+ MYA  G++  A+ +F    +R +V+WN+++S  ++N  + E V   R++ 
Sbjct: 155 NEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKIL 214

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              I+ D V++ SVL AC  L  L+ G+ I  Y +   +  +N+   S L+DMY  C +V
Sbjct: 215 ELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTS-LIDMYAKCGQV 273

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  R++FD +  + +  W+AMI+GY Q +  +EAL LF +M++   ++PN  TM SV+ +
Sbjct: 274 DTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQK-GNVYPNEVTMVSVLYS 332

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C    A+   + +H +  K  +     +   L+D Y++ G I+ S  +F +M  ++  +W
Sbjct: 333 CAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTW 392

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             +I G      +G+  M L    +M E    N+V          KPN +T + VL  C 
Sbjct: 393 TALIQGL---ANNGEGKMALEFFSSMLE----NDV----------KPNDVTFIGVLSACS 435

Query: 516 ALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITW 573
               + +G+ +     R+  +   +     +VD+  + G L  A +  D MP   N + W
Sbjct: 436 HACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVW 495

Query: 574 NVIIMAYGMH 583
             ++ +   H
Sbjct: 496 RTLLASCRAH 505



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 221/429 (51%), Gaps = 23/429 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+L + +M    +Q D F F +VLKA + ++ L  G+Q+HA ++K G+  S+  V NTL+
Sbjct: 105 ALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFK-SNEFVENTLI 163

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            MY  CG  +     VFD + E+  V+WNSM++   + G WD  ++ FR +L   +E   
Sbjct: 164 QMYANCGQ-IGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDD 222

Query: 181 FTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
            T++SV +AC  L+  + G  +G  +    LR    N  +  +L+ MYAK G+VD A+ L
Sbjct: 223 VTMISVLMACGRLANLEIGELIGEYIVSKGLR---RNNTLTTSLIDMYAKCGQVDTARKL 279

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F   + RD+V+W+ ++S  +Q D+  EA+    +M    + P+ V++ SVL +C+ L   
Sbjct: 280 FDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAY 339

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           +TGK +H Y  +  + +  + +G+ L+D Y  C  ++    VF  +S K +  W A+I G
Sbjct: 340 ETGKWVHFYIKKKKMKLTVT-LGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQG 398

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
              N   + AL  F  M E   + PN  T   V+ AC  S A    +G H   +   + R
Sbjct: 399 LANNGEGKMALEFFSSMLE-NDVKPNDVTFIGVLSAC--SHACLVDQGRH---LFNSMRR 452

Query: 420 DRYVQ------NALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDAL 472
           D  ++        ++D+  R G +E +    D+M    + V W T++     C  H +  
Sbjct: 453 DFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS---CRAHKNIE 509

Query: 473 MLLREMQNM 481
           M  + ++++
Sbjct: 510 MAEKSLEHI 518


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 290/809 (35%), Positives = 445/809 (55%), Gaps = 38/809 (4%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           PD  A+ A+ +     + +  G +  AH     +    + + N +++M  + G + W  +
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPGLRACAHADDR-HAWFGLRLGNAMLSMLVRFG-ETWHAW 143

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VF ++ E+D  SWN M+    + G  D AL+ +  M+++ V P  +T   V  +C  + 
Sbjct: 144 RVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 203

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
                R+GR+VH + LR G      ++NALM MYAK G V  A+ +F S    D +SWN 
Sbjct: 204 ---DWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNA 260

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++   +N +    +     M    ++P+ ++I SV  A   L  +   KE+H  A++  
Sbjct: 261 MIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRG 320

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D +F  S L+ MY +   +   R VF  +  +    W AMI+GY +N + ++AL ++
Sbjct: 321 FAGDVAFCNS-LIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVY 379

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             ME V  + P+  T++S + AC    +      +H  A   G      V NA+++MY++
Sbjct: 380 ALME-VNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAK 438

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             RI+ +  +F  M  +D VSW++MI G+    ++ +AL   R M               
Sbjct: 439 SKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--------------- 483

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
              +   KPNS+T +  L  C A  AL  GKEIHA+ +R  +  +  + +AL+D+Y KCG
Sbjct: 484 ---LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCG 540

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
              +A   F     ++V++WN++I  +  HG G   L     MV  G       P+EVTF
Sbjct: 541 QTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGE-----CPDEVTF 595

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +AL  ACS  GMVSEG +LF+ M + Y I P+  HYAC+VDLL RAG++ +AY  IN MP
Sbjct: 596 VALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMP 655

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
              D A  W +LL  CRIH++VE+GE+AA+ +  LEP+ A ++VLL ++Y+ A LWDK  
Sbjct: 656 ITPD-AAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLA 714

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VRK M+E G+  + GCSW+E    +H FL  D SH Q  +++  LE + ERM+  GY P
Sbjct: 715 RVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAP 774

Query: 794 DTSCVLHNVNEEE--KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
             S    +  E+E  K+ + CGHSE+LA+AFG++NT PGT+I V KN   C  CH+  K 
Sbjct: 775 VES----HCPEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKM 830

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGD 880
           IS I  R+II+RD ++ HHFK+G+CSCGD
Sbjct: 831 ISNIVRRDIIVRDSKQLHHFKDGSCSCGD 859


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/771 (36%), Positives = 434/771 (56%), Gaps = 39/771 (5%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MY  C S   D    FD + +++  SW  ++A     G+    L A   M    V P + 
Sbjct: 1   MYAHCDSP-GDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAV 59

Query: 182 TLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLF 240
           T ++   +C +  S RDG+R+ + V  + L   E +  + NAL+ MY K G +  AK +F
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVDSRL---EIDPKVSNALLNMYKKCGSLSHAKRVF 116

Query: 241 KSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
              E  R+++SW+ +  + + +    EA+   R M L GIK    ++ ++L ACS   ++
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176

Query: 300 DTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALW 353
             G+ IH+        +++L+ N     A++ MY  C  VE  R+VFD + +  + +  W
Sbjct: 177 QDGRMIHSCIALSGFESELLVAN-----AVMTMYGRCGAVEEARKVFDAMDEALRDVVSW 231

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N M++ Y  N+  ++A+ L+ +M+    L P+  T  S++ AC  +E       +H   +
Sbjct: 232 NIMLSTYVHNDRGKDAIQLYQRMQ----LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIV 287

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
              L ++  V NAL+ MY++ G    ++ +FD ME R  +SW T+I+ Y       +A  
Sbjct: 288 NDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACH 347

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L ++M  +E EKN ++         R KP+++  +T+L  C  +SAL +GK +   A   
Sbjct: 348 LFQQM--LELEKNGSS--------QRVKPDALAFVTILNACADVSALEQGKMVSEQAASC 397

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLEL 592
            L++D  VG+A+V++Y KCG +  ARR+FD +  R +V  WN +I  Y   G+  E L+L
Sbjct: 398 GLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKL 457

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY-GIEPSPDHYAC 651
              M  EG     V+P+  +F+++  ACSH+G+  +G   F  M  +Y  +  +  H+ C
Sbjct: 458 FWRMEMEG-----VRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGC 512

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           V DLLGR G++++A + +  +P + D A AW+SLL ACR H++++  +  A  L  LEP 
Sbjct: 513 VADLLGRGGRLKEAEEFLEKLPVKPD-AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPR 571

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
            A+ YV LSNIY+  Q W     VRK M E GV+KE G S IE G  +H F  GD +H +
Sbjct: 572 CATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPR 631

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           + ++   L  L  +M++ GYVPDT  VLH V+E+EKE LL  HSE+LAIA G+++TP GT
Sbjct: 632 NREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGT 691

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +RV KNLRVC+DCH ATK ISKI  R+I++RD  RFH FK+G CSC DYW
Sbjct: 692 PLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 268/569 (47%), Gaps = 42/569 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A S Q +E + +   M +  ++PD   F   L +    + L  G +IH  V
Sbjct: 25  SWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMV 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWD 162
           V     +    V+N L+NMY KCGS +    +VF ++   ++ +SW+ M       G   
Sbjct: 85  VDSRLEIDP-KVSNALLNMYKKCGS-LSHAKRVFAKMERTRNVISWSIMAGAHALHGNVW 142

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMN 221
            AL  FR ML   ++ +   +V++  ACS+ +    ++ GR +H   +L   E    + N
Sbjct: 143 EALRHFRFMLLLGIKATKSAMVTILSACSSPAL---VQDGRMIHSCIALSGFESELLVAN 199

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           A+M MY + G V++A+ +F + ++  RD+VSWN ++S+   ND+  +A+   ++M LR  
Sbjct: 200 AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLR-- 257

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD V+  S+L ACS  E +  G+ +H   + ND L  N  VG+ALV MY  C      R
Sbjct: 258 -PDKVTYVSLLSACSSAEDVGLGRVLHKQIV-NDELEKNVIVGNALVSMYAKCGSHTEAR 315

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG------LWPNATTMSSVV 393
            VFD +  + I  W  +I+ Y +     EA  LF +M E+        + P+A    +++
Sbjct: 316 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 375

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC    A    + +   A   GL  D+ V  A++++Y + G IE ++ IFD +  R  V
Sbjct: 376 NACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDV 435

Query: 454 S-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
             WN MI  Y   GQ  +AL L   M+ ME                  +P+S + +++L 
Sbjct: 436 QLWNAMIAVYAQFGQSHEALKLFWRME-MEG----------------VRPDSFSFVSILL 478

Query: 513 GCGALSALAKGKEIHAYAI---RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
            C       +GK          RN+  T    G  + D+  + G L  A    + +PV+ 
Sbjct: 479 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFG-CVADLLGRGGRLKEAEEFLEKLPVKP 537

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           + + W  ++ A   H + +   E+   ++
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVANKLL 566


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/657 (41%), Positives = 382/657 (58%), Gaps = 39/657 (5%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + D+ D+ SWN++++ L+++    EA++    M    + P   S    + ACS L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 297 EMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
             + +GK+ H     +  ++DI     FV SAL+ MY  C ++E  R+VFD I  + I  
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDI-----FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144

Query: 353 WNAMITGYGQNEYDEEALMLFIKM-----EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           W +MI GY  N    +A+ LF  +     ++   ++ ++  + SV+ AC R  A    E 
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           IH   IK G  R   V N L+D Y++ G   + +++ IFD +  +D VS+N++++ Y   
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A  + R +        +N V            N+ITL TVL       AL  GK 
Sbjct: 265 GMSNEAFEVFRRLV-------KNKVVTF---------NAITLSTVLLAVSHSGALRIGKC 308

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   IR  L  DV+VG++++DMY KCG +  AR+ FD M  +NV +W  +I  YGMHG 
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             + LEL   M+  G     V+PN +TF+++ AACSH+G+  EG   F  MK  +G+EP 
Sbjct: 369 AAKALELFPAMIDSG-----VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C+VDLLGRAG ++ AY LI  M  + D    WSSLL ACRIH+NVE+ EI+   L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVELAEISVARL 482

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F L+     +Y+LLS+IY+ A  W     VR  MK  G+ K PG S +E   E+H FL G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H Q E+++ FL  L+ ++ + GYV +TS V H+V+EEEKE  L  HSEKLAIAFGI+
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NT PG+T+ V KNLRVC+DCH   K ISKI  RE ++RD +RFHHFK+G CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 225/435 (51%), Gaps = 23/435 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    EA+L++  M +  + P   +FP  +KA + + D+  GKQ H   
Sbjct: 43  SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +GY  S + V++ L+ MY  CG  + D  KVFD I +++ VSW SMI      G    
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160

Query: 164 ALEAFRMMLYSNVEP------SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
           A+  F+ +L    +        S  LVSV  ACS +  +    L   +H   ++ G +  
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG---LTESIHSFVIKRGFDRG 217

Query: 217 TFIMNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQ 273
             + N L+  YAK G   V  A+ +F    D+D VS+N+I+S  +Q+    EA  +F R 
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           +  + +  + +++++VL A SH   L  GK IH   +R   L D+  VG++++DMYC C 
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCG 336

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            VE  R+ FD + +K +  W AMI GYG + +  +AL LF  M + +G+ PN  T  SV+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVL 395

Query: 394 PACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR 450
            AC  S A    EG    +A+K   G +  +++   ++D+  R G ++ +  +   M+++
Sbjct: 396 AAC--SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 451 -DTVSWNTMITGYTI 464
            D++ W++++    I
Sbjct: 454 PDSIIWSSLLAACRI 468



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 33/460 (7%)

Query: 136 VFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +F+R  +K D  SWNS+IA L R G    AL AF  M   ++ P+  +      ACS+L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               +  G+Q H  +   G + + F+ +AL+ MY+  G+++DA+ +F     R++VSW +
Sbjct: 91  ---DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147

Query: 254 IVSSLSQNDKFLEAVMFLRQMAL------RGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           ++     N   L+AV   + + +        +  D + + SV+ ACS +      + IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207

Query: 308 YALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           + ++       S VG+ L+D Y    E  V   R++FD I DK    +N++++ Y Q+  
Sbjct: 208 FVIKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA  +F ++ +   +  NA T+S+V+ A   S A    + IH   I++GL  D  V  
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +++DMY + GR+E ++  FD M+ ++  SW  MI GY + G    AL L   M       
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM------- 379

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSA 544
                  +D  V   +PN IT ++VL  C       +G +  +A   R  +   +     
Sbjct: 380 -------IDSGV---RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +VD+  + G L  A  +   M ++ + I W+ ++ A  +H
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/808 (35%), Positives = 446/808 (55%), Gaps = 46/808 (5%)

Query: 67  EMTRSDIQP-----DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-YGLSSVTVANTLV 120
           E+T   I P     D+FA    L+      D   G+ +H HVV+ G  G   +  AN L+
Sbjct: 44  ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           NMYGK G  +    ++FDR+ E++ VS+ +++    + G ++ A   FR + +   E + 
Sbjct: 104 NMYGKLGP-LASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162

Query: 181 F---TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
           F   T++ +A+A       D   L   VH  + ++G + N F+ + L+  Y+    V DA
Sbjct: 163 FVLTTMLKLAIAM------DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +F     +D V W  +VS  S+ND    A     +M + G KP+  ++ SVL A   L
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCL 276

Query: 297 EMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
             +  GK IH  A++  ND       VG AL+DMY  C +++  R  F+ I    + L +
Sbjct: 277 PSVVLGKGIHGCAIKTLNDT---EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 333

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI+ Y Q+  +E+A  LF+++   + + PN  ++SSV+ AC         + IH HAIK
Sbjct: 334 FMISRYAQSNQNEQAFELFLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           +G   D +V NALMD Y++   ++ S  IF  +   + VSWNT++ G++  G   +AL +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EMQ  +    +                 +T  +VL  C + +++    +IH    ++ 
Sbjct: 453 FCEMQAAQMPCTQ-----------------VTYSSVLRACASTASIRHAGQIHCSIEKST 495

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
              D V+G++L+D YAKCG +  A +VF  +  R++I+WN II  Y +HG+  + LEL  
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M         V+ N++TF+AL + CS +G+V+ G+ LF  M+ D+GI+PS +HY C+V 
Sbjct: 556 RM-----NKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVR 610

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGRAG++ DA Q I  +P     A  W +LL +C IH+NV +G  +A+ +  +EP   +
Sbjct: 611 LLGRAGRLNDALQFIGDIPSA-PSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 669

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLLSN+Y++A   D+   +RK M+ +GVRK PG SW+E   EIH F  G   H     
Sbjct: 670 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRV 729

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L+ +  +EGY+PD + VLH+V++E+K  +L  HSE+LA+A+G++ TPPG  IR
Sbjct: 730 INAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIR 789

Query: 835 VAKNLRVCNDCHQATKFISKIESREIIL 862
           + KNLR C DCH A   ISKI  REII+
Sbjct: 790 ILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 242/511 (47%), Gaps = 40/511 (7%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           N FR     + +M  S  +P+ FA  +VLKA   +  + LGK IH   +K     +   V
Sbjct: 246 NAFR----VFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIK-TLNDTEPHV 300

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              L++MY KCG D+ D    F+ I   D +  + MI+   +  + + A E F  ++ S+
Sbjct: 301 GGALLDMYAKCG-DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           V P+ ++L SV  AC+N+ + D    G+Q+H +++++G E + F+ NALM  YAK   +D
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLD---FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            +  +F S  D + VSWNTIV   SQ+    EA+    +M    +    V+ +SVL AC+
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
               +    +IH  ++      +++ +G++L+D Y  C  +    +VF  + ++ I  WN
Sbjct: 477 STASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 535

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           A+I+GY  +    +AL LF +M + + +  N  T  +++  C          G+  H + 
Sbjct: 536 AIISGYALHGQAADALELFDRMNK-SNVESNDITFVALLSVC-------SSTGLVNHGLS 587

Query: 415 L--------GLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTI- 464
           L        G+         ++ +  R GR+  +     D+      + W  +++   I 
Sbjct: 588 LFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH 647

Query: 465 ----CGQHGDALMLLREMQNMEEEKNRNNVY----DLDETVLRPKPNSITLMTVLPGCGA 516
                G+     +L  E Q+       +N+Y     LD+  L  K      +  +PG   
Sbjct: 648 KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPG--- 704

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           LS +    EIHA+++ ++   D+ V +A+++
Sbjct: 705 LSWVEIKGEIHAFSVGSVDHPDMRVINAMLE 735



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S    EA+  + EM  + +      + +VL+A A    +    QIH  +
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  +   +V + N+L++ Y KCG  + D  KVF  + E+D +SWN++I+     G+   
Sbjct: 492 EKSTFNNDTV-IGNSLIDTYAKCGY-IRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN-------LSRRDGLRLGRQVHGNSLRVGEWN 216
           ALE F  M  SNVE +  T V++   CS+       LS  D +R+    HG    +  + 
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRID---HGIKPSMEHYT 606

Query: 217 TFIMNALMAMYAKLGRVDDA 236
             +      +  + GR++DA
Sbjct: 607 CIV-----RLLGRAGRLNDA 621


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/657 (41%), Positives = 381/657 (57%), Gaps = 39/657 (5%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + D+ D+ SWN++++ L+++    EA+     M    + P   S    + ACS L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 297 EMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
             + +GK+ H     +  ++DI     FV SAL+ MY  C ++E  R+VFD I  + I  
Sbjct: 90  LDIFSGKQTHQQAFVFGYQSDI-----FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144

Query: 353 WNAMITGYGQNEYDEEALMLFIKM-----EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           W +MI GY  N    +A+ LF  +     ++ A ++ ++  M SV+ AC R  A    E 
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTES 204

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           IH   IK G  R   V N L+D Y++ G   + +++ IFD +  +D VS+N++++ Y   
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A  + R +              + E V+    N ITL TVL       AL  GK 
Sbjct: 265 GMSNEAFDVFRRL--------------IKEKVV--TFNCITLSTVLLAVSHSGALRIGKC 308

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   IR  L  DV+VG++++DMY KCG +  AR  FD M  +NV +W  +I  YGMHG 
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             + LEL   M+  G     V+PN +TF+++ AACSH+G+   G   F  MK  +G+EP 
Sbjct: 369 AAKALELFPAMIDSG-----VRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPG 423

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C+VDLLGRAG ++ AY LI  M  E D    WSSLL ACRIH+NVE+ EI+   L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSI-IWSSLLAACRIHKNVELAEISVARL 482

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F L+P    +Y+LLS+IY+ +  W     VR  MK  G+ K PG S +E   E+H FL G
Sbjct: 483 FELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIG 542

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H Q E+++ FL  L+ ++ + GYV +TS V H+V+EEEKE  L  HSEKLAIAFGI+
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NT PG+T+ V KNLRVC+DCH   K ISKI  RE ++RD +RFHHFK+G CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 223/435 (51%), Gaps = 23/435 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    EA+ ++  M +  + P   +FP  +KA + + D+  GKQ H   
Sbjct: 43  SWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQA 102

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +GY  S + V++ L+ MY  CG  + D  KVFD I +++ VSW SMI      G    
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160

Query: 164 ALEAFRMMLYSNVEP------SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
           A+  F+ +L    +        S  +VSV  ACS ++ +    L   +H   ++ G +  
Sbjct: 161 AVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKG---LTESIHSFVIKRGFDRG 217

Query: 217 TFIMNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQ 273
             + N L+  YAK G   V  A+ +F    D+D VS+N+I+S  +Q+    EA  +F R 
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRL 277

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           +  + +  + +++++VL A SH   L  GK IH   +R   L D+  VG++++DMYC C 
Sbjct: 278 IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCG 336

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            VE  R  FD + +K +  W AMI GYG + +  +AL LF  M + +G+ PN  T  SV+
Sbjct: 337 RVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVL 395

Query: 394 PACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR 450
            AC  S A     G H  +A+K   G +  +++   ++D+  R G ++ +  +   M++ 
Sbjct: 396 AAC--SHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKME 453

Query: 451 -DTVSWNTMITGYTI 464
            D++ W++++    I
Sbjct: 454 PDSIIWSSLLAACRI 468



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 193/389 (49%), Gaps = 31/389 (7%)

Query: 136 VFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +F+R  +K D  SWNS+IA L R G    AL AF  M   ++ P+  +      ACS+L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               +  G+Q H  +   G + + F+ +AL+ MY+  G+++DA+ +F     R++VSW +
Sbjct: 91  ---DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147

Query: 254 IVSSLSQNDKFLEAVMFLRQMALR------GIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           ++     N   L+AV   + + +        +  D + + SV+ ACS +      + IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHS 207

Query: 308 YALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           + ++       S VG+ L+D Y    E  V   R++FD I DK    +N++++ Y Q+  
Sbjct: 208 FVIKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA  +F ++ +   +  N  T+S+V+ A   S A    + IH   I++GL  D  V  
Sbjct: 267 SNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +++DMY + GR+E ++  FD M+ ++  SW  MI GY + G    AL L   M       
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM------- 379

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGC 514
                  +D  V   +PN IT ++VL  C
Sbjct: 380 -------IDSGV---RPNYITFVSVLAAC 398


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 385/638 (60%), Gaps = 31/638 (4%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +S N ++ SL +  K  +A+  L Q +     P   +   ++  C H   L  G  +H +
Sbjct: 47  ISNNQLIQSLCKEGKLKQALRVLSQES----SPSQQTYELLILCCGHRSSLSDGLRVHRH 102

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            L N    D  F+ + L+ MY +   V+  R+VFD    + I +WNA+        + EE
Sbjct: 103 ILDNGSDQD-PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDRYVQ 424
            L L+ KM  + G+  +  T + V+ ACV SE   D     + IH H  + G     Y+ 
Sbjct: 162 VLGLYWKMNRI-GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIM 220

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
             L+DMY+R G ++ +  +F+ M VR+ VSW+ MI  Y   G+  +AL   REM  M E 
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM--MTET 278

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
           K+ +             PNS+T+++VL  C +L+AL +G+ IH Y +R  L + + V SA
Sbjct: 279 KDSS-------------PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISA 325

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LV MY +CG L+  +RVFD M  R+V++WN +I +YG+HG G++ +++ + M+A G+   
Sbjct: 326 LVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGA--- 382

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
              P  VTF+++  ACSH G+V EG  LF  M  D+GI+P  +HYAC+VDLLGRA ++++
Sbjct: 383 --SPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDE 440

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A +++  M  E      W SLLG+CRIH NVE+ E A++ LF LEP  A +YVLL++IY+
Sbjct: 441 AAKMVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
            AQ+WD+   V+K ++  G++K PG  W+E   +++ F++ D  +   EQ+H FL  L+E
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAE 559

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
            M+++GY+P T  VL+ +  EEKE ++ GHSEKLA+AFG++NT  G  IR+ KNLR+C D
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCED 619

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH  TKFISK   +EI++RDV RFH FKNG CSCGDYW
Sbjct: 620 CHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 204/448 (45%), Gaps = 33/448 (7%)

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGR 203
           ++S N +I +LC+ GK   AL     +L     PS  T   + L C + S   DGLR+ R
Sbjct: 46  KISNNQLIQSLCKEGKLKQALR----VLSQESSPSQQTYELLILCCGHRSSLSDGLRVHR 101

Query: 204 QVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
            +  N     + + F+   L+ MY+ LG VD A+ +F     R +  WN +  +L+    
Sbjct: 102 HILDNG---SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE----MLDTGKEIHAYALRNDILIDNS 319
             E +    +M   G++ D  +   VL AC   E     L  GKEIHA+  R      + 
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG-YNSHV 217

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK-MEE 378
           ++ + LVDMY     V+    VF+ +  + +  W+AMI  Y +N    EAL  F + M E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTE 277

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
                PN+ TM SV+ AC    A      IHG+ ++ GL     V +AL+ MY R G+++
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLD 337

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           + + +FD M  RD VSWN++I+ Y + G    A+ +  EM                    
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM-----------------LAN 380

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLN- 556
              P  +T ++VL  C     + +GK +     R+  +   V   + +VD+  +   L+ 
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDE 440

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHG 584
            A+ V D+        W  ++ +  +HG
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 225/492 (45%), Gaps = 44/492 (8%)

Query: 14  PPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDI 73
           PPL S+  +    ++     +  +Q       I+SL  E +  Q        + +   + 
Sbjct: 27  PPLCSVALNNLSISSGAGAKISNNQL------IQSLCKEGKLKQ-------ALRVLSQES 73

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
            P    +  ++        LS G ++H H++  G       +A  L+ MY   GS  +  
Sbjct: 74  SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPF-LATKLIGMYSDLGSVDY-A 131

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC-SN 192
            KVFD+  ++    WN++   L   G  +  L  +  M    VE   FT   V  AC ++
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               D L  G+++H +  R G   + +IM  L+ MYA+ G VD A  +F     R++VSW
Sbjct: 192 ECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSW 251

Query: 252 NTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           + +++  ++N K  EA+   R+M    +   P+ V++ SVL AC+ L  L+ G+ IH Y 
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYI 311

Query: 310 LRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           LR    +D+   V SALV MY  C +++ G+RVFD + D+ +  WN++I+ YG + Y  +
Sbjct: 312 LRRG--LDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRK 369

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI--HGHAIKLGLGRDRYVQ-- 424
           A+ +F +M    G  P   T  SV+ AC         EG+   G  +   + RD  ++  
Sbjct: 370 AIQIFEEM-LANGASPTPVTFVSVLGAC-------SHEGLVEEGKRLFESMWRDHGIKPQ 421

Query: 425 ----NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQ 479
                 ++D+  R  R++ +  +  DM        W +++     C  HG+  +  R  +
Sbjct: 422 VEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS---CRIHGNVELAERASR 478

Query: 480 NM--EEEKNRNN 489
            +   E KN  N
Sbjct: 479 RLFALEPKNAGN 490


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/842 (33%), Positives = 470/842 (55%), Gaps = 36/842 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   A +   +E +  Y  +  + +         V++      D ++G QI   V
Sbjct: 317  SWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDV 376

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K G   SSV+VAN+L++M+G   S + +  +VF+ + E+D +SWNS+I      G+++ 
Sbjct: 377  IKSGLDTSSVSVANSLISMFGNYDS-VEEASRVFNNMQERDTISWNSIITASAHNGRFEE 435

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +L  F  M  ++ +    T+ ++  AC +      L+ GR +HG   + G E N  + N+
Sbjct: 436  SLGHFFWMRRTHPKTDYITISALLPACGSAQH---LKWGRGLHGLITKSGLESNVCVCNS 492

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L++MYA+ G  +DA+ +F +   RDL+SWN++++S  ++ K+  A++ L +M       +
Sbjct: 493  LLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMN 552

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             V+  + L AC +LE L   K +HA+ +   +   N  +G+ LV MY     ++  ++V 
Sbjct: 553  YVTFTTALSACYNLEKL---KIVHAFVIHFAVH-HNLIIGNTLVTMYGKFGLMDEAQKVC 608

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              + ++ +  WNA+I G+  ++ D  A +    +    GL  N  T+ +++  C+ S  +
Sbjct: 609  KIMPERDVVTWNALIGGHADDK-DPNATIQAFNLMRREGLLSNYITIVNLLGTCM-SPDY 666

Query: 403  PDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
              K G  IH H +  G   D YVQ++L+ MY++ G +  S  IFD +  +++ +WN + +
Sbjct: 667  LLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFS 726

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                 G   +AL  +  M        RN+  DLD+        S+ L T+    G L+ L
Sbjct: 727  ANAHYGPGEEALKFIARM--------RNDGVDLDQFSF-----SVALATI----GNLTVL 769

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             +G+++H++ I+     D  V +A +DMY KCG ++   R+  +  +R+  +WN++I A 
Sbjct: 770  DEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISAL 829

Query: 581  GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
              HG  ++  E    M+  G     +KP+ VTF++L +ACSH G+V EG+  F  M  ++
Sbjct: 830  ARHGFFRQATEAFHEMLDLG-----LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEF 884

Query: 641  GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            G+  + +H  C++DLLGR+G++ +A   I+ MP   ++   W SLL AC++H N+E+G  
Sbjct: 885  GVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEF-VWRSLLAACKVHGNLELGRK 943

Query: 701  AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            AA  LF L     S YVL SN+ +S Q W    +VRK+M+   ++K+P CSWI+  +++ 
Sbjct: 944  AADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVM 1003

Query: 761  KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
             F  GD  H QS Q++  LE L +  R+EG++PDTS  L + +EE+KE  L  HSE++A+
Sbjct: 1004 TFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIAL 1063

Query: 821  AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            AFG++N+  G+ +R+ KNLRVC DCH   K +SKI  R+I++RD  RFHHF  G CSC D
Sbjct: 1064 AFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSD 1123

Query: 881  YW 882
            YW
Sbjct: 1124 YW 1125



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 167/602 (27%), Positives = 284/602 (47%), Gaps = 50/602 (8%)

Query: 22  HQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFP 81
           H PP   +   PL   Q +        L +  + N+F    +       S+ Q   F   
Sbjct: 107 HAPPTPYS---PLLNCQNQ--------LETCVKENEFLSYGIHTFIRNHSNPQVSRF--- 152

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
            + K  + I + ++GK +HA  VK      +    NTLVNMY K GS  +  + VFD++ 
Sbjct: 153 -LQKGFSEISEGNVGKALHALCVK-DVIQQNTFYTNTLVNMYSKFGSIKYAQH-VFDKMY 209

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +++  SWN+MI+   R G +  A++ F  M  + V PSS+ + S+  AC     R G   
Sbjct: 210 DRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACD----RSGCMT 265

Query: 202 --GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
              RQ+HG  ++ G   N F+  +L+  Y   G V +A  LF+  E+ ++VSW +++   
Sbjct: 266 EGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCY 325

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           + N    E +   R +   G+   G ++A+V+  C        G +I    +++ +   +
Sbjct: 326 ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             V ++L+ M+ N   VE   RVF+ + ++    WN++IT    N   EE+L  F  M  
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
                 +  T+S+++PAC  ++      G+HG   K GL  +  V N+L+ MY++ G  E
Sbjct: 446 THPK-TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSE 504

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++ +F  M  RD +SWN+M+  +   G++  A++LL EM                    
Sbjct: 505 DAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKT----------------- 547

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           R   N +T  T L  C  L  L   K +HA+ I   +  ++++G+ LV MY K G ++ A
Sbjct: 548 RKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEA 604

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           ++V  +MP R+V+TWN +I  +    +    ++    M  EG     +  N +T + L  
Sbjct: 605 QKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREG-----LLSNYITIVNLLG 659

Query: 619 AC 620
            C
Sbjct: 660 TC 661



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 244/551 (44%), Gaps = 31/551 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q R   SW   + + A + +F E++  +  M R+  + D     A+L A    Q L  G+
Sbjct: 413 QERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGR 472

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H  + K G   S+V V N+L++MY + GS   D   VF  +  +D +SWNSM+A+   
Sbjct: 473 GLHGLITKSGLE-SNVCVCNSLLSMYAQAGSSE-DAELVFHTMPARDLISWNSMMASHVE 530

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            GK+  A+     ML +    +  T  +   AC NL +       + VH   +      N
Sbjct: 531 DGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL------KIVHAFVIHFAVHHN 584

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             I N L+ MY K G +D+A+ + K   +RD+V+WN ++   + +      +     M  
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRR 644

Query: 277 RGIKPDGVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            G+  + ++I ++L  C S   +L  G  IHA+ +     +D ++V S+L+ MY  C ++
Sbjct: 645 EGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELD-TYVQSSLITMYAQCGDL 703

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
                +FD +++K  + WNA+ +        EEAL    +M    G+  +  + S  +  
Sbjct: 704 NTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRN-DGVDLDQFSFSVALAT 762

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                   + + +H   IKLG   D YV NA MDMY + G I+    I    ++R   SW
Sbjct: 763 IGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSW 822

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N +I+     G    A     EM              LD   L  KP+ +T +++L  C 
Sbjct: 823 NILISALARHGFFRQATEAFHEM--------------LD---LGLKPDHVTFVSLLSACS 865

Query: 516 ALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITW 573
               + +G    +       + T +     ++D+  + G L  A    D MPV  N   W
Sbjct: 866 HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925

Query: 574 NVIIMAYGMHG 584
             ++ A  +HG
Sbjct: 926 RSLLAACKVHG 936



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 7/192 (3%)

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            T +R   N      +  G   +S    GK +HA  +++++  +    + LV+MY+K G 
Sbjct: 138 HTFIRNHSNPQVSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGS 197

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           + +A+ VFD M  RN  +WN +I  +   G   + ++   +M   G     V P+     
Sbjct: 198 IKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENG-----VTPSSYVIA 252

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           ++  AC  SG ++EG    +      G+  +      ++   G  G V +A +L   +  
Sbjct: 253 SMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI-- 310

Query: 675 EFDKAGAWSSLL 686
           E     +W+SL+
Sbjct: 311 EEPNIVSWTSLM 322


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/657 (41%), Positives = 382/657 (58%), Gaps = 39/657 (5%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + D+ D+ SWN++++ L+++    EA++    M    + P   S    + ACS L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 297 EMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
             + +GK+ H     +  ++DI     FV SAL+ MY  C ++E  R+VFD I  + I  
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDI-----FVSSALIVMYSTCGKLEDARKVFDEIPKRDIVS 144

Query: 353 WNAMITGYGQNEYDEEALMLFIKM-----EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           W +MI GY  N    +A+ LF  +     ++   ++ ++  + SV+ AC R  A    E 
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           IH   IK G  R   V N L+D Y++ G   + +++ IFD +  +D VS+N++++ Y   
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A  + R +        +N V            N+ITL TVL       AL  GK 
Sbjct: 265 GMSNEAFEVFRRLV-------KNKVVTF---------NAITLSTVLLAVSHSGALRIGKC 308

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   IR  L  DV+VG++++DMY KCG +  AR+ FD M  +NV +W  +I  YGMHG 
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             + LEL   M+  G     V+PN +TF+++ AACSH+G+  EG   F  MK  +G+EP 
Sbjct: 369 AAKALELFPAMIDSG-----VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C+VDLLGRAG ++ AY LI  M  + D    WSSLL ACRIH+NVE+ EI+   L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVELAEISVARL 482

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F L+     +Y+LLS+IY+ A  W     VR  MK  G+ K PG S +E   E+H FL G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H Q E+++ FL  L+ ++ + GYV +TS V H+V+EEEKE  L  HSEKLAIAFGI+
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NT PG+T+ V KNLRVC+DCH   K ISKI  RE ++RD +RFHHFK+G CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 225/435 (51%), Gaps = 23/435 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    EA+L++  M +  + P   +FP  +KA + + D+  GKQ H   
Sbjct: 43  SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +GY  S + V++ L+ MY  CG  + D  KVFD I ++D VSW SMI      G    
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALD 160

Query: 164 ALEAFRMMLYSNVEP------SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
           A+  F+ +L    +        S  LVSV  ACS +  +    L   +H   ++ G +  
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG---LTESIHSFVIKRGFDRG 217

Query: 217 TFIMNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQ 273
             + N L+  YAK G   V  A+ +F    D+D VS+N+I+S  +Q+    EA  +F R 
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           +  + +  + +++++VL A SH   L  GK IH   +R   L D+  VG++++DMYC C 
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCG 336

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            VE  R+ FD + +K +  W AMI GYG + +  +AL LF  M + +G+ PN  T  SV+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVL 395

Query: 394 PACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR 450
            AC  S A    EG    +A+K   G +  +++   ++D+  R G ++ +  +   M+++
Sbjct: 396 AAC--SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 451 -DTVSWNTMITGYTI 464
            D++ W++++    I
Sbjct: 454 PDSIIWSSLLAACRI 468



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 33/460 (7%)

Query: 136 VFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +F+R  +K D  SWNS+IA L R G    AL AF  M   ++ P+  +      ACS+L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               +  G+Q H  +   G + + F+ +AL+ MY+  G+++DA+ +F     RD+VSW +
Sbjct: 91  ---DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTS 147

Query: 254 IVSSLSQNDKFLEAVMFLRQMAL------RGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           ++     N   L+AV   + + +        +  D + + SV+ ACS +      + IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207

Query: 308 YALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           + ++       S VG+ L+D Y    E  V   R++FD I DK    +N++++ Y Q+  
Sbjct: 208 FVIKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA  +F ++ +   +  NA T+S+V+ A   S A    + IH   I++GL  D  V  
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +++DMY + GR+E ++  FD M+ ++  SW  MI GY + G    AL L   M       
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM------- 379

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSA 544
                  +D  V   +PN IT ++VL  C       +G +  +A   R  +   +     
Sbjct: 380 -------IDSGV---RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           +VD+  + G L  A  +   M ++ + I W+ ++ A  +H
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/714 (36%), Positives = 402/714 (56%), Gaps = 66/714 (9%)

Query: 202 GRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            +Q+H   L+    +   ++ L+++Y+ +  + D+  LF +      ++W +++   + +
Sbjct: 25  AQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
               +++     M   G+ PD     SVL +C+ L  L+ G+ +H Y +R  +  D  + 
Sbjct: 85  GLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD-LYT 143

Query: 322 GSALVDMYCNCREVE--------------------------------CGRRVFDFISDKK 349
           G+AL++MY   R +E                                  R++F+ + +K 
Sbjct: 144 GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKD 203

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  WN +I G  +N   EE L +  +M   A L P++ T+SSV+P    +      + IH
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGG-ANLKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G +I+ GL  D YV ++L+DMY++  R+  S  +F  +  RD +SWN++I G    G   
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD 322

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           + L   R+M                  + + KP S +  +++P C  L+ L  GK++H Y
Sbjct: 323 EGLRFFRQM-----------------LMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 365

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
             RN    ++ + S+LVDMYAKCG +  A+++FD M +R++++W  +IM   +HG+  + 
Sbjct: 366 ITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA 425

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +EL + M  EG +            A+  ACSH G+V E    F  M  D+GI P  +HY
Sbjct: 426 IELFEQMETEGIK------------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 473

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNLFLL 708
           A V DLLGRAG++E+AY  I  M       G+ W++LL ACR+H+N+++ E  A  +  +
Sbjct: 474 AAVSDLLGRAGRLEEAYDFICGM--HIGPTGSIWATLLSACRVHKNIDMAEKVANRILEV 531

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           +P+    Y+LL+NIYS+A+ W +A   R  M+ +G+RK P CSWIE  ++++ F+AGD S
Sbjct: 532 DPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDES 591

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H   E++   +E L E M KEGYVPDTS V H+V EE+K+ L+C HSE+LAI FGI+NTP
Sbjct: 592 HPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTP 651

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G TIRV KNLRVC DCH ATKFISKI  REI++RD  RFHHFKNGTCSCGDYW
Sbjct: 652 AGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 231/454 (50%), Gaps = 51/454 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R         +++ S+I M  S + PD+  FP+VLK+ A + DL+LG+ +H ++
Sbjct: 73  AWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYI 132

Query: 104 VKYGYGLSSVTVANTLVNMYGKC------------GSDMWD------------------- 132
           ++ G      T  N L+NMY K               +++D                   
Sbjct: 133 IRVGLDFDLYT-GNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV-ALACS 191
           V K+F+ + EKD VSWN++IA   R G ++  L   R M  +N++P SFTL SV  L   
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           N+     +  G+++HG S+R G + + ++ ++L+ MYAK  RV D+  +F    +RD +S
Sbjct: 252 NVD----ISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+I++   QN  F E + F RQM +  IKP   S +S++PAC+HL  L  GK++H Y  
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           RN    +N F+ S+LVDMY  C  +   +++FD +  + +  W AMI G   +    +A+
Sbjct: 368 RNG-FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALM 428
            LF +ME           + +V+ AC       D+   + +++    G    V++  A+ 
Sbjct: 427 ELFEQME--------TEGIKAVLTACSHG-GLVDEAWKYFNSMTRDFGIAPGVEHYAAVS 477

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           D+  R GR+E +      M +  T S W T+++ 
Sbjct: 478 DLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSA 511


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/755 (34%), Positives = 416/755 (55%), Gaps = 89/755 (11%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           NL  + G  L      N + V    TF  N +++ YAK G+++ A  +F     RD VSW
Sbjct: 18  NLYAKTGFHLDAHDLFNEMPVK--TTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSW 75

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            TI+   +Q  +F +A+     M    + P   ++ +VL +C+       GK++H++ ++
Sbjct: 76  TTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVK 135

Query: 312 ----------NDIL--------------------IDNSFVGSALVDMYCNCREVECGRRV 341
                     N +L                    + N+   +A++ ++ NC  V+     
Sbjct: 136 LGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQ 195

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +S++ I  WN+MI G  Q+ +D EAL  F  + +   L P+  +++S + AC   E 
Sbjct: 196 FELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEK 255

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI---------------------- 439
               + IHG+ ++        V NAL+ MY++ G +EI                      
Sbjct: 256 LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALL 315

Query: 440 -----------SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
                      ++ IF+ ++  D V+W  MI GY   G + DA+ + + M +        
Sbjct: 316 NGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEG------ 369

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                      P+PNS TL  +L    ++++L  GK+IHA AIR+  A    VG+AL  M
Sbjct: 370 -----------PRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418

Query: 549 YAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           YAK G +N AR+VF+L+   R+ ++W  +IMA   HG G+E +EL + M+  G     +K
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG-----IK 473

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ +T++ + +AC+H G+V +G   F  MK+ + I+P+  HYAC+VDL GRAG +++AY+
Sbjct: 474 PDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYK 533

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            +  MP E D   AW SLL +C++++NV++ ++AA+ L L+EP+ +  Y  L+N+YSS  
Sbjct: 534 FVENMPMEPDVI-AWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCG 592

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            WD A  +RK MK  GV+KE G SW++  ++ H F   DG H Q ++++  ++ + + ++
Sbjct: 593 KWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIK 652

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           K G+ PDT  VLH++  E K+ +L  HSEKLAIAFGI++TP  TT+R+ KNLRVCNDCH 
Sbjct: 653 KMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHN 712

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A KFISK+  REII+RD  RFHHFK+G+CSC DYW
Sbjct: 713 AIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 247/532 (46%), Gaps = 96/532 (18%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT+++ Y K G  +   ++VFD I  +D VSW ++I    + G+++ A++ F  M+   V
Sbjct: 45  NTILSGYAKQGK-LEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKV 103

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVH--------------GNSL------------ 210
            P+ FTL +V  +C+    R    +G++VH               NSL            
Sbjct: 104 LPTQFTLTNVLASCAATGSRG---IGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKM 160

Query: 211 ------RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
                 R+   NT   NA+++++   GRVD A   F+   +RD+VSWN++++  +Q+   
Sbjct: 161 AKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFD 220

Query: 265 LEAVMFLRQ-MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVG 322
            EA+ F    +    +KPD  S+AS L AC++LE L  GK+IH Y +R   + D S  VG
Sbjct: 221 NEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRT--MFDASGAVG 278

Query: 323 SALVDMYCNCREVECGRR---------------------------------VFDFISDKK 349
           +AL+ MY     VE  RR                                 +F+ + D  
Sbjct: 279 NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI GY QN  + +A+ +F  M    G  PN+ T+++++ A     +    + IH
Sbjct: 339 VVAWTAMIVGYVQNGLNNDAIEVFKTMVS-EGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQH 468
             AI+ G      V NAL  MY++ G I  ++ +F+ + + RDTVSW +MI      G  
Sbjct: 398 ASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLG 457

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A+ L  +M                   L  KP+ IT + VL  C     + +G+  + 
Sbjct: 458 EEAIELFEQM-----------------LTLGIKPDHITYVGVLSACTHGGLVEQGRS-YF 499

Query: 529 YAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
             ++N+   D  +   + +VD++ + G L  A +  + MP+  +VI W  ++
Sbjct: 500 DLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLL 551



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 225/502 (44%), Gaps = 98/502 (19%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
            R   SW   +    +  +F +AI  +++M +  + P  F    VL + A      +GK+
Sbjct: 69  VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKK 128

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H+ VVK G   + V VAN+L+NMY K G D+     VFDR+  ++  SWN+MI+     
Sbjct: 129 VHSFVVKLGLH-ACVPVANSLLNMYAKTG-DLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186

Query: 159 GKWDLALEAFRMM--------------------------LYSNV------EPSSFTLVSV 186
           G+ DLAL  F ++                           +S++      +P  F+L S 
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLR----------------------------------V 212
             AC+NL +   L  G+Q+HG  +R                                  +
Sbjct: 247 LSACANLEK---LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGI 303

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + +     AL+  Y KLG +  A+ +F S +D D+V+W  ++    QN    +A+   +
Sbjct: 304 SDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFK 363

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M   G +P+  ++A++L A S +  L+ GK+IHA A+R+   +  S VG+AL  MY   
Sbjct: 364 TMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPS-VGNALTTMYAKA 422

Query: 333 REVECGRRVFDFI-SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             +   R+VF+ +  ++    W +MI    Q+   EEA+ LF +M  + G+ P+  T   
Sbjct: 423 GSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTL-GIKPDHITYVG 481

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA------------LMDMYSRMGRIEI 439
           V+ AC            HG  ++ G      ++N             ++D++ R G ++ 
Sbjct: 482 VLSACT-----------HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQE 530

Query: 440 SKTIFDDMEVR-DTVSWNTMIT 460
           +    ++M +  D ++W ++++
Sbjct: 531 AYKFVENMPMEPDVIAWGSLLS 552



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 69/386 (17%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA- 471
           +KLGL    Y+ N LM++Y++ G    +  +F++M V+ T SWNT+++GY   G+   A 
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 472 ----LMLLRE----------MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
               L+ +R+             M   ++   ++ +D    +  P   TL  VL  C A 
Sbjct: 62  QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIF-VDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-------- 569
            +   GK++H++ ++  L   V V ++L++MYAK G L  A+ VFD M +RN        
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180

Query: 570 -----------------------VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
                                  +++WN +I     HG   E L+   +++ + S    +
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTS----L 236

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV----VDLLGRAGKV 662
           KP+  +  +  +AC++   +S     F K    Y +    D    V    + +  ++G V
Sbjct: 237 KPDRFSLASALSACANLEKLS-----FGKQIHGYIVRTMFDASGAVGNALISMYAKSGGV 291

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA-AQNLF--LLEPDVASHYVLL 719
           E A ++I           A+++LL        V++G+I  A+ +F  L +PDV +   ++
Sbjct: 292 EIARRIIEQSGISDLDVIAFTALLNGY-----VKLGDITPARQIFNSLKDPDVVAWTAMI 346

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVR 745
              Y    L + A++V K M   G R
Sbjct: 347 VG-YVQNGLNNDAIEVFKTMVSEGPR 371



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 44/292 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++    +AI  +  M     +P++F   A+L A + +  L+ GKQIHA  
Sbjct: 341 AWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASA 400

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWD 162
           ++ G  LS  +V N L  MY K GS +    KVF+ + + +D VSW SMI  L + G  +
Sbjct: 401 IRSGEALSP-SVGNALTTMYAKAGS-INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGE 458

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A+E F  ML   ++P   T V V  AC+              HG  +  G         
Sbjct: 459 EAIELFEQMLTLGIKPDHITYVGVLSACT--------------HGGLVEQGR-------- 496

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
                      D  K + K   D  L  +  +V    +     EA  F+  M +   +PD
Sbjct: 497 --------SYFDLMKNVHKI--DPTLSHYACMVDLFGRAGLLQEAYKFVENMPM---EPD 543

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILID--NSFVGSALVDMYCNC 332
            ++  S+L +C   + +D  K     A    +LI+  NS   SAL ++Y +C
Sbjct: 544 VIAWGSLLSSCKVYKNVDLAK----VAAERLLLIEPNNSGAYSALANVYSSC 591


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 287/846 (33%), Positives = 458/846 (54%), Gaps = 41/846 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    EA+++Y  M +  +  +  A   V+     ++D   G Q+ AHV
Sbjct: 112 SWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G  L+ V+VAN+L+ M+G     + D  ++FDR+ E+D++SWN+MI+       +  
Sbjct: 172 VVSGL-LTHVSVANSLITMFGNL-RRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSK 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
                  M +  V+P   TL S+   C++    D + LG  +H   +  G   +  ++NA
Sbjct: 230 CFIVLSDMRHGEVKPDVTTLCSLVSVCAS---SDLVALGSGIHSLCVSSGLHCSVPLINA 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-KP 281
           L+ MY+  G++D+A++LF++   RD++SWNT++SS  Q++  +EA+  L Q+       P
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + ++ +S L ACS  E L  G+ IHA  L+   L +   +G++L+ MY  C  +E   RV
Sbjct: 347 NSMTFSSALGACSSPEALMNGRTIHAMILQRS-LQNVLLIGNSLLTMYSKCNSMEDTERV 405

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----- 396
           F+ +    +   N +  GY   E    A+ +F  M    G+ PN  TM ++   C     
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT-GIKPNYITMINLQGTCKSLGD 464

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
           + S   P    +H +  + GL  D Y+ N+L+ MY+  G +E S  IF  +  +  +SWN
Sbjct: 465 LHSYGMP----LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWN 520

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            +I      G+  +A+ L  + Q+   + +R                   L   L     
Sbjct: 521 AIIAANVRHGRGEEAIKLFMDSQHAGNKLDR-----------------FCLAECLSSSAN 563

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L++L +G ++H  +++N L  D  V +A +DMY KCG ++   +       R    WN +
Sbjct: 564 LASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTL 623

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  +G  +E  +  K+MV+ G      KP+ VTF+AL +ACSH+G++ +GMD +  M
Sbjct: 624 ISGYARYGYFKEAEDTFKHMVSVGQ-----KPDYVTFVALLSACSHAGLIDKGMDYYNSM 678

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              +G+ P   H  C+VDLLGR GK  +A + I+ MP        W SLL + R H+N++
Sbjct: 679 APTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV-LPNDLIWRSLLSSSRTHKNLD 737

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           IG  AA+NL  L+P   S YVLLSN+Y++   W     +R  MK + + K P CSW++  
Sbjct: 738 IGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK 797

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           +E+  F  GD SH  +E+++  L+ +  ++R+ GYV DTS  LH+ +EE+KE  L  HSE
Sbjct: 798 NEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSE 857

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+A+G+L  P G+TIR+ KNLRVC DCH   K +S +  REI+LRD  RFH FK+G+C
Sbjct: 858 KLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSC 917

Query: 877 SCGDYW 882
           SC D+W
Sbjct: 918 SCSDFW 923



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 251/527 (47%), Gaps = 31/527 (5%)

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            +   SW + ++   R G    A    R+M   +V  S F L S+  AC +   ++G   
Sbjct: 3   HRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAAC 62

Query: 202 GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G  +H  + R G   N +I  AL+ +Y   G V +A+ LF     R++VSW  I+ +LS 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N    EA++  R+M   G+  +  ++A+V+  C  LE    G ++ A+ + + +L   S 
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS- 181

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V ++L+ M+ N R V+   R+FD + ++    WNAMI+ Y   E   +  ++   M    
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH-G 240

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + P+ TT+ S+V  C  S+      GIH   +  GL     + NAL++MYS  G+++ +
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           +++F +M  RD +SWNTMI+ Y       +AL  L ++   +E                 
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDE----------------G 344

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            PNS+T  + L  C +  AL  G+ IHA  ++  L   +++G++L+ MY+KC  +    R
Sbjct: 345 PPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTER 404

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ MP  +V++ NV+   Y    +    + +   M     RG  +KPN +T I L   C
Sbjct: 405 VFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWM-----RGTGIKPNYITMINLQGTC 459

Query: 621 SHSG-MVSEGMDLFYK------MKDDYGIEPSPDHYACVVDLLGRAG 660
              G + S GM L         + D+Y        YA   DL    G
Sbjct: 460 KSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 178/708 (25%), Positives = 325/708 (45%), Gaps = 41/708 (5%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA--GIQD-LSLG 96
           R   SW  ++   AR      A      M   D+    FA  +++ A    G Q+  + G
Sbjct: 4   RTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACG 63

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
             IHA   + G  + +V +   L+++YG  G  + +  ++F  + +++ VSW +++  L 
Sbjct: 64  AAIHALTHRAGL-MGNVYIGTALLHLYGSRGLVL-NAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR-DGLRLGRQVHGNSLRVGEW 215
             G  + AL A+R M    V  ++  L +V   C  L     GL++   V  + L     
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLT--- 178

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  + N+L+ M+  L RV DA+ LF   E+RD +SWN ++S  S  + + +  + L  M 
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              +KPD  ++ S++  C+  +++  G  IH+  + + +      + +ALV+MY    ++
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI-NALVNMYSTAGKL 297

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +    +F  +S + +  WN MI+ Y Q+    EAL    ++ +     PN+ T SS + A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C   EA  +   IH   ++  L     + N+L+ MYS+   +E ++ +F+ M   D VS 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N +  GY       +A+ +   M+                     KPN IT++ +   C 
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTG-----------------IKPNYITMINLQGTCK 460

Query: 516 ALSAL-AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
           +L  L + G  +HAY  +  L +D  + ++L+ MYA CG L  +  +F  +  ++VI+WN
Sbjct: 461 SLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWN 520

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II A   HG G+E ++L  +    G+     K +        ++ ++   + EGM L +
Sbjct: 521 AIIAANVRHGRGEEAIKLFMDSQHAGN-----KLDRFCLAECLSSSANLASLEEGMQL-H 574

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQ 693
            +    G++         +D+ G+ GK++    ++  +P P       W++L+     + 
Sbjct: 575 GLSVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRPTQCWNTLISGYARYG 631

Query: 694 NVEIGEIAAQNLFLL--EPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             +  E   +++  +  +PD  +   LLS   S A L DK MD    M
Sbjct: 632 YFKEAEDTFKHMVSVGQKPDYVTFVALLSAC-SHAGLIDKGMDYYNSM 678



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 257/551 (46%), Gaps = 29/551 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + SW   +   +    + +  +   +M   +++PD     +++   A    ++LG 
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IH+  V  G    SV + N LVNMY   G  + +   +F  ++ +D +SWN+MI++  +
Sbjct: 267 GIHSLCVSSGLH-CSVPLINALVNMYSTAG-KLDEAESLFRNMSRRDVISWNTMISSYVQ 324

Query: 158 FGKWDLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
                 ALE    +L ++   P+S T  S   ACS+    + L  GR +H   L+    N
Sbjct: 325 SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS---PEALMNGRTIHAMILQRSLQN 381

Query: 217 TFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             ++ N+L+ MY+K   ++D + +F+S    D+VS N +    +  +    A+     M 
Sbjct: 382 VLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMR 441

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             GIKP+ +++ ++   C  L  L + G  +HAY  +  +L D  ++ ++L+ MY  C +
Sbjct: 442 GTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDE-YITNSLITMYATCGD 500

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E    +F  I++K +  WNA+I    ++   EEA+ LF+  +  AG   +   ++  + 
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH-AGNKLDRFCLAECLS 559

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +     +  +   +HG ++K GL  D +V NA MDMY + G+++       D   R T  
Sbjct: 560 SSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQC 619

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WNT+I+GY   G   +A    + M ++ +                 KP+ +T + +L  C
Sbjct: 620 WNTLISGYARYGYFKEAEDTFKHMVSVGQ-----------------KPDYVTFVALLSAC 662

Query: 515 GALSALAKGKEIH-AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
                + KG + + + A    ++  +     +VD+  + G    A +  D MPV  N + 
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 573 WNVIIMAYGMH 583
           W  ++ +   H
Sbjct: 723 WRSLLSSSRTH 733



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 22/158 (13%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-I 505
           M  R + SW T ++G   CG    A  LLR M+                   R  P S  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRE------------------RDVPLSGF 42

Query: 506 TLMTVLPGC---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            L +++  C   G     A G  IHA   R  L  +V +G+AL+ +Y   G +  A+R+F
Sbjct: 43  ALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLF 102

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             MP RNV++W  I++A   +G  +E L   + M  EG
Sbjct: 103 WEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG 140


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/771 (35%), Positives = 444/771 (57%), Gaps = 32/771 (4%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +AN ++ MYGKC S   D  +VFDRI +++  SW+ ++    +   +  ALE ++ M+  
Sbjct: 4   LANMIIQMYGKCKSPE-DARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRK 62

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            +   ++TL SV  AC+ L     +  GR V   +  +G E +  +  +L+ ++AK G +
Sbjct: 63  EISIDAYTLSSVLAACTKLL---DVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 234 DDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           ++A+++F+S    RD++S   ++ +  ++ K   A+    +M  +G++PD  + A++L A
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           CS  + L  GK IH + L +     N  V +AL+ MY  C  ++  + +F  +  K +  
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHF-GNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WNAMI  Y    +D++A  LF +M  + G  P+  T SS++ AC   +   D   +H   
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTL-GHTPDIYTFSSILGACASPKRLEDGRMLHVRI 297

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
              G  RD  +QN L+ M++R G +E ++  F  +E ++  +WNTM+  Y    +  DAL
Sbjct: 298 TARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDAL 357

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L + M              L E      P+  T  +V+  C +L AL +GK IH  +  
Sbjct: 358 FLYKNM--------------LLEGF---TPDRFTFSSVVDSCASLGALREGKFIHECSTS 400

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
                DV++G+ALV+MYAKCG L  A++ FD +  ++V++W+ +I A   HG  +E LEL
Sbjct: 401 CGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL 460

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M  +G     +  NEVT  ++  ACSH G + EG+D F  +  D+GIE   ++    
Sbjct: 461 SHLMNLQG-----IAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGF 515

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           +DLLGRAG +++A  +++ MP +     A  +LLG C++H +V  G+   + +  LEP+ 
Sbjct: 516 IDLLGRAGWLKEAEHVLHTMPFKVSFV-ALVTLLGGCKVHGDVRRGKALTKRIVALEPEN 574

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
              YVLL+N+Y++A  WD    +R+ M++ GV+++ GCS IE+ D+I++F  GD S+ ++
Sbjct: 575 PGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRN 634

Query: 773 EQLHGFLENLSERMRKE-GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
            ++   LE L  RM++E GYVPDT  V H+V++++KE LL  HSEK+A+ FG++ +PPG+
Sbjct: 635 LEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGS 694

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T+R+ KNLRVC+DCH   K  SKI  R II+RD  RFHHF+ G CSCGDYW
Sbjct: 695 TLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 268/563 (47%), Gaps = 36/563 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  ++EA+  Y EM R +I  D +   +VL A   + D+  G+ +    
Sbjct: 35  SWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKA 94

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWD 162
            + G+    V VA +L++++ KCG  + +   VF  +   +D +S  +MI    R GK D
Sbjct: 95  EELGFE-KDVVVATSLIHLFAKCGC-LEEAESVFRSMGAMRDIISVTAMIGAYVRHGKND 152

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
           LAL+ +  M    +EP +FT  ++  ACS+    D L  G+ +H + L    + N  + N
Sbjct: 153 LALDTYWKMRSQGLEPDAFTYAAILGACSS---PDFLLDGKHIHKHILESKHFGNISVRN 209

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK G + D+K+LF + + +D+VSWN ++++ +      +A     +M   G  P
Sbjct: 210 ALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTP 269

Query: 282 DGVSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           D  + +S+L AC+  + L+ G+ +H    A     D  + N+     L+ M+  C  +E 
Sbjct: 270 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNN-----LISMFTRCGSLES 324

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            RR F  I  K++  WN M+  Y Q +  ++AL L+  M  + G  P+  T SSVV +C 
Sbjct: 325 ARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNM-LLEGFTPDRFTFSSVVDSCA 383

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              A  + + IH  +   G  +D  +  AL++MY++ G +  +K  FD +  +D VSW+ 
Sbjct: 384 SLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSA 443

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI       QHG A          EE    +++ +L         N +T  +VL  C   
Sbjct: 444 MIAA---SAQHGHA----------EEALELSHLMNLQGIA----QNEVTASSVLHACSHG 486

Query: 518 SALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
             L +G +      ++  +  D       +D+  + G L  A  V   MP + + +    
Sbjct: 487 GRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVT 546

Query: 576 IIMAYGMHGEGQEVLELLKNMVA 598
           ++    +HG+ +    L K +VA
Sbjct: 547 LLGGCKVHGDVRRGKALTKRIVA 569



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 231/486 (47%), Gaps = 36/486 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +TF+ N ++ MY K    +DA+ +F   + R+  SW+ +V    QN  + EA+   ++M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCN 331
            + I  D  +++SVL AC+ L  ++ G+ +   A       D++     V ++L+ ++  
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVV-----VATSLIHLFAK 115

Query: 332 CREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
           C  +E    VF  +   + I    AMI  Y ++  ++ AL  + KM    GL P+A T +
Sbjct: 116 CGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRS-QGLEPDAFTYA 174

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +++ AC   +   D + IH H ++     +  V+NAL+ MY++ G ++ SK++F  M+V+
Sbjct: 175 AILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVK 234

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSWN MI  YT+ G   DA  L   M                   L   P+  T  ++
Sbjct: 235 DVVSWNAMIAAYTLYGHDKDAFSLFHRM-----------------CTLGHTPDIYTFSSI 277

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C +   L  G+ +H          D  + + L+ M+ +CG L  ARR F  +  + +
Sbjct: 278 LGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKEL 337

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
             WN ++ AY    +G++ L L KNM+ EG       P+  TF ++  +C+  G + EG 
Sbjct: 338 GAWNTMLAAYAQFDKGKDALFLYKNMLLEG-----FTPDRFTFSSVVDSCASLGALREG- 391

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
              ++     G E        +V++  + G + DA +  + +  +     +WS+++ A  
Sbjct: 392 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK--DVVSWSAMIAASA 449

Query: 691 IHQNVE 696
            H + E
Sbjct: 450 QHGHAE 455


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 298/834 (35%), Positives = 450/834 (53%), Gaps = 85/834 (10%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            +++H   +KYG+ + ++ ++NTL+N+Y + G D+    K+FD ++ ++ V+W  +I+  
Sbjct: 118 ARELHLQSIKYGF-VGNLFLSNTLINIYVRIG-DLGSAQKLFDEMSNRNLVTWACLISGY 175

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVG 213
            + GK D A   FR M+ +   P+ +   S   AC   S   G +LG Q+HG  +  R G
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGCKLGVQIHGLISKTRYG 234

Query: 214 EWNTFIMNALMAMYAK-LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
             +  + N L++MY   L   +DA+++F     R+ +SWN+I+S  S+    + A     
Sbjct: 235 S-DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 293

Query: 273 QMALRGI----KP-DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
            M   G+    KP D  S  SVL      E    G+E+HA+ +R  +  +   +G+ LV+
Sbjct: 294 SMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +     VF+ + +K    WN++I+G  QNE  E+A  +F  M E      +  
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEY-----DQV 403

Query: 388 TMSSVVPACVRSEAFPDK------------------------------------EGIHGH 411
           + +SV+ A   SEA   +                                      IH  
Sbjct: 404 SWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHAL 463

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGD 470
            +K  L  D  + NAL+  Y + G +   + IF  M E RD VSWN+MI+GY     H +
Sbjct: 464 VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI----HNE 519

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
            L    ++     +K +             + +S T  T+L  C +++ L +G E+HA  
Sbjct: 520 LLHKAMDLVWFMMQKGQ-------------RLDSFTFATILSACASVATLERGMEVHACG 566

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           IR  L +DVVVGSALVDMY+KCG +++A R F+LMP+RNV +WN +I  Y  HG G++ L
Sbjct: 567 IRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKAL 626

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           +L   M+ +G       P+ VTF+ + +ACSH G V EG + F  M + Y + P  +H++
Sbjct: 627 KLFTRMMLDGQ-----PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFS 681

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLL 708
           C+VDLLGRAGK+++    IN MP +      W ++LGAC R + +N E+G  AA+ L  L
Sbjct: 682 CMVDLLGRAGKLDEVGDFINSMPMK-PNVLIWRTVLGACCRANGRNTELGRRAAEMLLEL 740

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP  A +YVLL+N+Y+S + W+     R  MKE  V+KE GCSW+   D +H F+AGD  
Sbjct: 741 EPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKL 800

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H + + ++  L  L+ +MR  GY+P T   L ++  E KE LL  HSEK+A+AF +L   
Sbjct: 801 HPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQ 859

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
               IR+ KNLRVC DCH A  +ISKI  R+I+LRD  RFHHF++G CSCGDYW
Sbjct: 860 SALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/775 (35%), Positives = 426/775 (54%), Gaps = 51/775 (6%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y   G D+     +F     ++  +W  M+      G+   AL  FR ML   V
Sbjct: 78  NLILSAYSSSG-DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGV 136

Query: 177 EPSSFTLVSVA--LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            P   T+ +V     C+  S          +H  +++ G + + F+ N L+  Y K G +
Sbjct: 137 IPDRVTVTTVLNLPGCTVPS----------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F    D+D V++N ++   S+     +A+     M   GI     + +S+L   
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + +  L  G ++HA  LR+  ++ N FV ++L+D Y  C  ++  RR+FD + ++    +
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPD---KEG 407
           N +I  Y  N+     L LF +M+++     + P AT +S        + + PD    + 
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV-------AGSLPDVHIGKQ 358

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH   + LGL  +  + NAL+DMYS+ G ++ +K+ F +   +  +SW  +ITGY   GQ
Sbjct: 359 IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 418

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           H +AL L  +M+       R  +          +P+  T  +++    +L+ +  G+++H
Sbjct: 419 HEEALQLFSDMR-------RAGL----------RPDRATFSSIIKASSSLAMIGLGRQLH 461

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           +Y IR+   + V  GS LVDMYAKCGCL+ A R FD MP RN I+WN +I AY  +GE +
Sbjct: 462 SYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAK 521

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             +++ + M+  G       P+ VTF+++ AACSH+G+  E M  F+ MK  Y I P  +
Sbjct: 522 NAIKMFEGMLHCG-----FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HYACV+D LGR G      +++  MP + D    W+S+L +CRIH N E+  +AA  LF 
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGNQELARVAADKLFG 635

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           +EP  A+ YV+LSNIY+ A  W+ A  V+K M++ GVRKE G SW+E   +I+ F + D 
Sbjct: 636 MEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDL 695

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +    +++   L+ L + M K+GY PD +C LH V+ E K   L  HSE+LAIAF ++NT
Sbjct: 696 TSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNT 755

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P GT IR+ KNL  C DCH   K ISKI +R+II+RD RRFHHFK+G CSCGDYW
Sbjct: 756 PAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 38/476 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F +N +++ Y+  G +  A+ LF S   R+  +W  ++ + +   +  +A+   R M 
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 276 LRGIKPDGVSIASV--LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
             G+ PD V++ +V  LP C       T   +H +A++   L  + FV + L+D YC   
Sbjct: 133 GEGVIPDRVTVTTVLNLPGC-------TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHG 184

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   RRVF  + DK    +NAM+ G  +     +AL LF  M   AG+     T SS++
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR-AGIPATHFTFSSIL 243

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                         +H   ++     + +V N+L+D YS+   ++  + +FD+M  RD V
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           S+N +I  Y         L L REMQ +            D  VL          T+L  
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKL----------GFDRQVL-------PYATMLSV 346

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
            G+L  +  GK+IHA  +   LA++ ++G+AL+DMY+KCG L+ A+  F     ++ I+W
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
             +I  Y  +G+ +E L+L  +M     R   ++P+  TF ++  A S   M+  G  L 
Sbjct: 407 TALITGYVQNGQHEEALQLFSDM-----RRAGLRPDRATFSSIIKASSSLAMIGLGRQLH 461

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            Y ++  Y  + S    + +VD+  + G +++A +  + MP     + +W++++ A
Sbjct: 462 SYLIRSGY--KSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER--NSISWNAVISA 513



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 218/433 (50%), Gaps = 24/433 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  +  M R+ I   +F F ++L   AG+  L LG Q+HA V++    + +V V N+L
Sbjct: 219 QALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR-STSVLNVFVNNSL 277

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM----LYSN 175
           ++ Y KC   + D+ ++FD + E+D VS+N +IA           L  FR M        
Sbjct: 278 LDFYSKCDC-LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVD 234
           V P + T++SVA +  +      + +G+Q+H   + +G  +  ++ NAL+ MY+K G +D
Sbjct: 337 VLPYA-TMLSVAGSLPD------VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            AK+ F +  ++  +SW  +++   QN +  EA+     M   G++PD  + +S++ A S
Sbjct: 390 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASS 449

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            L M+  G+++H+Y +R+     + F GS LVDMY  C  ++   R FD + ++    WN
Sbjct: 450 SLAMIGLGRQLHSYLIRSG-YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 508

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           A+I+ Y      + A+ +F  M    G  P++ T  SV+ AC  +    D+   + H +K
Sbjct: 509 AVISAYAHYGEAKNAIKMFEGMLH-CGFNPDSVTFLSVLAACSHN-GLADECMKYFHLMK 566

Query: 415 ----LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
               +   ++ Y    ++D   R+G     + +  +M  + D + W +++    I G   
Sbjct: 567 HQYSISPWKEHYA--CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE 624

Query: 470 DALMLLREMQNME 482
            A +   ++  ME
Sbjct: 625 LARVAADKLFGME 637



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ Q  EA+  + +M R+ ++PD   F +++KA + +  + LG+Q+H+++
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GY  SSV   + LV+MY KCG  + +  + FD + E++ +SWN++I+    +G+   
Sbjct: 465 IRSGYK-SSVFSGSVLVDMYAKCGC-LDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 522

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++ F  ML+    P S T +SV  ACS+
Sbjct: 523 AIKMFEGMLHCGFNPDSVTFLSVLAACSH 551


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/819 (34%), Positives = 450/819 (54%), Gaps = 46/819 (5%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV-Y 134
           D+  +  +++       L  GK  H H++K  +    + + N L+ MY KCG    DV  
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFK-PCLFLLNNLLYMYCKCGET--DVAK 74

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FDR+ +++ VSWNS+I+   + G +   +  F+    S++    FT  +    C    
Sbjct: 75  KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG--- 131

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
           R   LRLGR +H      G     ++ N+L+ MY K GR+D A+ +F+S ++ D VSWN+
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191

Query: 254 IVSS---LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC--SHLEMLDTGKEIHAY 308
           +++    +  ND+ L     L +M   G+  +  ++ S L AC  +    ++ GK +H  
Sbjct: 192 LIAGYVRIGSNDEMLR---LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGC 248

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ-----N 363
           A++  + +D   VG+AL+D Y    ++E   ++F  + D  + ++NAMI G+ Q     +
Sbjct: 249 AVKLGLDLD-VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMAD 307

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           E+  EA+ LF +M+   G+ P+  T SS++ AC   EAF   + IH    K  L  D ++
Sbjct: 308 EFANEAMYLFFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 366

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NAL+++YS  G IE     F      D VSW ++I G+   GQ    L L  E+     
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL----- 421

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                            KP+  T+  +L  C  L+A+  G++IHAYAI+  +    ++ +
Sbjct: 422 ------------LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN 469

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           + + MYAKCG ++ A   F      ++++W+V+I +   HG  +E ++L + M     +G
Sbjct: 470 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM-----KG 524

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             + PN +TF+ +  ACSH G+V EG+  F  MK D+GI P+  H AC+VDLLGRAG++ 
Sbjct: 525 SGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLA 584

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A   I     E D    W SLL ACR+H+  + G+  A+ +  LEP+ A+ YVLL NIY
Sbjct: 585 EAESFIMDSGFEGDPV-MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIY 643

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A +   A ++R  MK+ GV+KEPG SWIE G+ +H F+AGD SH  S+ ++  LE + 
Sbjct: 644 NDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEML 703

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
           E ++K  Y+ +      +  + +  +++  HSEKLA+ FGI++ P    +RV KNLR C 
Sbjct: 704 EEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCW 763

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            CH+  K  S++E+REIILRD  RFH F++G+CSCGDYW
Sbjct: 764 HCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 176/615 (28%), Positives = 292/615 (47%), Gaps = 45/615 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   + E +  + E   SD++ D F F   L       DL LG+ IHA +
Sbjct: 87  SWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALI 146

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G G   V + N+L++MY KCG   W    VF+   E D VSWNS+IA   R G  D 
Sbjct: 147 TVSGLG-GPVLLTNSLIDMYCKCGRIDW-ARLVFESADELDSVSWNSLIAGYVRIGSNDE 204

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALAC-SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            L     ML   +  +S+ L S   AC SN S    +  G+ +HG ++++G + +  +  
Sbjct: 205 MLRLLVKMLRHGLNLNSYALGSALKACGSNFS--SSIECGKMLHGCAVKLGLDLDVVVGT 262

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ----NDKFLEAVMFL-RQMAL 276
           AL+  YAK+G ++DA  +FK   D ++V +N +++   Q     D+F    M+L  +M  
Sbjct: 263 ALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 322

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           RG+KP   + +S+L ACS +E  + GK+IHA   + ++  D  F+G+ALV++Y     +E
Sbjct: 323 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE-FIGNALVELYSLSGSIE 381

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            G + F       +  W ++I G+ QN   E  L LF ++   +G  P+  T+S ++ AC
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL-LFSGRKPDEFTISIMLSAC 440

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    E IH +AIK G+G    +QN+ + MY++ G I+ +   F + +  D VSW+
Sbjct: 441 ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWS 500

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+      QHG A    +E  ++ E    + +           PN IT + VL  C  
Sbjct: 501 VMISSN---AQHGCA----KEAVDLFELMKGSGI----------APNHITFLGVLVACSH 543

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARR-VFDLMPVRNVITWN 574
              + +G        ++   T  V  SA +VD+  + G L  A   + D     + + W 
Sbjct: 544 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 603

Query: 575 VIIMAYGMH---GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            ++ A  +H     G+ V E +  +  E +          +++ L+   + +G+     +
Sbjct: 604 SLLSACRVHKATDTGKRVAERVIELEPEAA---------ASYVLLYNIYNDAGIQMPATE 654

Query: 632 LFYKMKDDYGIEPSP 646
           +   MKD  G++  P
Sbjct: 655 IRNLMKDR-GVKKEP 668



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 23/294 (7%)

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           GL  ++ T + +V    R+ +    +  H H IK       ++ N L+ MY + G  +++
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           K +FD M  R+ VSWN++I+GYT  G + + + L +E +          + DL       
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEAR----------MSDL------- 116

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           + +  T    L  CG    L  G+ IHA    + L   V++ ++L+DMY KCG +++AR 
Sbjct: 117 RLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARL 176

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+     + ++WN +I  Y   G   E+L LL  M+  G     +  N     +   AC
Sbjct: 177 VFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG-----LNLNSYALGSALKAC 231

Query: 621 SHSGMVS-EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             +   S E   + +      G++        ++D   + G +EDA ++  +MP
Sbjct: 232 GSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 285


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/613 (40%), Positives = 362/613 (59%), Gaps = 25/613 (4%)

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           L  MALRG+  +     +VL  C     +  G+ +HA+ ++   L    ++ + L+  Y 
Sbjct: 46  LLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYL-PCVYLRTRLIVFYV 104

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +   R VFD + ++ +  W AMI+ Y Q  Y  +AL LF++M   +G  PN  T +
Sbjct: 105 KCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLR-SGTEPNEFTFA 163

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +V+ +C+ S  F     IH H IKL      YV ++L+DMY++ G+I  ++ IF  +  R
Sbjct: 164 TVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER 223

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VS   +I+GY   G   +AL L R +Q       R  +          + N +T  +V
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQ-------REGM----------QSNYVTYTSV 266

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L     L+AL  GK++H + +R+ + + VV+ ++L+DMY+KCG L +ARR+FD +  R V
Sbjct: 267 LTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTV 326

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           I+WN +++ Y  HGEG+EVLEL   M+ E     +VKP+ VT +A+ + CSH G+  +GM
Sbjct: 327 ISWNAMLVGYSKHGEGREVLELFNLMIDEN----KVKPDSVTVLAVLSGCSHGGLEDKGM 382

Query: 631 DLFYKMKD-DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
           D+FY M      ++P   HY CVVD+LGRAG+VE A++ +  MP E   A  W  LLGAC
Sbjct: 383 DIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFE-PSAAIWGCLLGAC 441

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
            +H N++IGE     L  +EP+ A +YV+LSN+Y+SA  W+    +R  M +  V KEPG
Sbjct: 442 SVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPG 501

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
            SWIE    +H F A D SH + E++   ++ LS R ++ GYVPD SCVLH+V+EE+KE 
Sbjct: 502 RSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEK 561

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
           +L  HSEKLA+ FG++ TP    IRV KNLR+C DCH   K+ SKI  RE+ LRD  RFH
Sbjct: 562 ILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFH 621

Query: 870 HFKNGTCSCGDYW 882
               G CSCGDYW
Sbjct: 622 RIVGGKCSCGDYW 634



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 214/420 (50%), Gaps = 27/420 (6%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
            + REA+L    M    +  +   +  VL      + +  G+++HAH++K  Y L  V +
Sbjct: 40  TRLREALL---HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHY-LPCVYL 95

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              L+  Y KC S + D   VFD + E++ VSW +MI+   + G    AL  F  ML S 
Sbjct: 96  RTRLIVFYVKCDS-LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSG 154

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
            EP+ FT  +V  +C   S   G  LGRQ+H + +++  E + ++ ++L+ MYAK G++ 
Sbjct: 155 TEPNEFTFATVLTSCIGSS---GFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIH 211

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           +A+ +F+   +RD+VS   I+S  +Q     EA+   R++   G++ + V+  SVL A S
Sbjct: 212 EARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALS 271

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFV--GSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            L  LD GK++H + LR+++    S+V   ++L+DMY  C  +   RR+FD + ++ +  
Sbjct: 272 GLAALDHGKQVHNHLLRSEV---PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVIS 328

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WNAM+ GY ++    E L LF  M +   + P++ T+ +V+  C       DK    G  
Sbjct: 329 WNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHG-GLEDK----GMD 383

Query: 413 I-------KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTI 464
           I       K+ +  D      ++DM  R GR+E +      M    + + W  ++   ++
Sbjct: 384 IFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSV 443



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 167/323 (51%), Gaps = 19/323 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++     +A+  +++M RS  +P+ F F  VL +  G     LG+QIH+H+
Sbjct: 126 SWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHI 185

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  Y  + V V ++L++MY K G  + +   +F  + E+D VS  ++I+   + G  + 
Sbjct: 186 IKLNYE-AHVYVGSSLLDMYAKDGK-IHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--N 221
           ALE FR +    ++ +  T  SV  A S L+  D    G+QVH + LR  E  ++++  N
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDH---GKQVHNHLLR-SEVPSYVVLQN 299

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIK 280
           +L+ MY+K G +  A+ +F +  +R ++SWN ++   S++ +  E + +F   +    +K
Sbjct: 300 SLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVK 359

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI--DNSFVGSALVDMYCNCREVECG 338
           PD V++ +VL  CSH  + D G +I        I +  D+   G  +VDM      VE  
Sbjct: 360 PDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYG-CVVDMLGRAGRVEAA 418

Query: 339 RRVFDFIS----DKKIALWNAMI 357
              F+F+     +   A+W  ++
Sbjct: 419 ---FEFVKKMPFEPSAAIWGCLL 438


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 432/761 (56%), Gaps = 33/761 (4%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAVAGIQ 91
           LP     C   W   +R    +  +R A+L Y++M    S   PD+  FP V+K+ A + 
Sbjct: 101 LPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            ++LG+ +H      G     + V + L+ MY   G  +WD  +VFD + E+D V WN M
Sbjct: 161 AIALGRLVHRTARTLGLD-GDMFVGSALIKMYAN-GGLLWDARQVFDGMAERDCVLWNVM 218

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +    + G    A+E F  M  S  EP+  TL   A   S  +    L  G Q+H  +++
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATL---ACFLSVSATESDLFFGVQLHTLAVK 275

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G E    + N L++MYAK   +DD   LF      DLV+WN ++S   QN    +A++ 
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLL 335

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M   GI+PD V++ S+LPA + L   + GKE+H Y +RN + +D  F+ SALVD+Y 
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD-VFLVSALVDIYF 394

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            CR V   + V+D      + + + MI+GY  N   +EA+ +F  + E  G+ PNA  ++
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIA 453

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           SV+PAC    A    + +H +A+K       YV++ALMDMY++ GR+++S  IF  +  +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V+WN+MI+ +   G+  +AL L REM  ME  K  N                +T+ +V
Sbjct: 514 DEVTWNSMISSFAQNGEPEEALNLFREM-CMEGVKYSN----------------VTISSV 556

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C +L A+  GKEIH   I+  +  D+   SAL+DMY KCG L +A RVF+ MP +N 
Sbjct: 557 LSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++WN II +YG +G  +E + LL++M  EG      K + VTF+AL +AC+H+G V EG+
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEG-----FKADHVTFLALVSACAHAGQVQEGL 671

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            LF  M ++Y I P  +H+AC+VDL  RAGK++ A +LI  MP + D AG W +LL ACR
Sbjct: 672 RLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPD-AGIWGALLHACR 730

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H+NVE+ EIA+Q LF L+P  + +YVL+SNI + A  WD    VR+ MK+  V+K PG 
Sbjct: 731 VHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGY 790

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
           SW++  +  H F+A D SH  SE ++  L+++   +R+EG+
Sbjct: 791 SWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 316/623 (50%), Gaps = 57/623 (9%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY--GKCGSDMWDVYKVFDR 139
           AVL+       LSLG Q+H   V  G   +   +   LV MY   +   D   V+    R
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRR 196
                 + WN +I  L   G +  AL  F + ++++     P S T   V  +C+ L   
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALG-- 160

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             + LGR VH  +  +G + + F+ +AL+ MYA  G + DA+ +F    +RD V WN ++
Sbjct: 161 -AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YALR 311
               +      AV     M   G +P+  ++A  L   +    L  G ++H     Y L 
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +++ + N+     LV MY  C+ ++ G ++F  +    +  WN MI+G  QN + ++AL+
Sbjct: 280 SEVAVANT-----LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF  M++ +G+ P++ T+ S++PA      F   + +HG+ ++  +  D ++ +AL+D+Y
Sbjct: 335 LFCDMQK-SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIY 393

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            +   + ++++++D  +  D V  +TMI+GY + G   +A+ + R              Y
Sbjct: 394 FKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFR--------------Y 439

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
            L++ +   +PN++ + +VLP C +++A+  G+E+H+YA++N       V SAL+DMYAK
Sbjct: 440 LLEQGI---RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAK 496

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG L+ +  +F  +  ++ +TWN +I ++  +GE +E L L + M  EG     VK + V
Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG-----VKYSNV 551

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGI----EPSPDHYA--CVVDLLGRAGKVEDA 665
           T  ++ +AC+        +   Y  K+ +G+        D +A   ++D+ G+ G +E A
Sbjct: 552 TISSVLSACA-------SLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWA 604

Query: 666 YQLINMMPPEFDKAGAWSSLLGA 688
           +++   MP + +   +W+S++ +
Sbjct: 605 HRVFESMPEKNEV--SWNSIIAS 625



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 26/351 (7%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + +VL  C     L  G ++H  A+   +   ++ + + LV MY   R       VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 346 SDKKIAL---WNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEA 401
                A    WN +I G         AL+ ++KM    +   P++ T   VV +C    A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +H  A  LGL  D +V +AL+ MY+  G +  ++ +FD M  RD V WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G    A+ L  +M+    E                 PN  TL   L      S L 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCE-----------------PNFATLACFLSVSATESDLF 264

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G ++H  A++  L ++V V + LV MYAKC CL+   ++F LMP  +++TWN +I    
Sbjct: 265 FGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCV 324

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
            +G   + L L  +M   G     ++P+ VT ++L  A +     ++G +L
Sbjct: 325 QNGFVDQALLLFCDMQKSG-----IRPDSVTLVSLLPALTDLNGFNQGKEL 370



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L+ VL GC + S L+ G ++H  A+   L ATD  + + LV MY        A  VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 566 P---VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           P       + WN +I    M G+ +  L     M A  S      P+  TF  +  +C+ 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPS---APLPDSHTFPYVVKSCAA 158

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ-----------LINM 671
            G ++ G  L ++     G++      + ++ +    G + DA Q           L N+
Sbjct: 159 LGAIALG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217

Query: 672 MPPEFDKAGAWSS 684
           M   + KAG+ SS
Sbjct: 218 MMDGYVKAGSVSS 230


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 289/798 (36%), Positives = 437/798 (54%), Gaps = 45/798 (5%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIA 153
           LG+ +H  ++      +   VAN+L+ MY KCG  +    +VFD +   +D VSW +M  
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCG-HVRAARRVFDGMRGLRDLVSWTAMAF 119

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGNSLR 211
            L R G    AL     ML S + P++FTL + A AC    L R  G      V G +++
Sbjct: 120 CLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSG----GTVLGFAIK 175

Query: 212 VGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            G W T   +  AL+ M+A+ G +  A+ +F    +R +V W  +++   Q     +AV 
Sbjct: 176 TGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVE 235

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
               M   G +PDG +++S++ AC+       G+++H+  LR   L+ ++ V   LVDMY
Sbjct: 236 LFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLG-LVSDTCVSCGLVDMY 294

Query: 330 CNCR---EVECGRRVFDFISDKKIALWNAMITGYGQ-NEYDEEALMLFIKMEEVAGLWPN 385
              +    +EC R+VF  +    +  W A+I+GY Q    +  A+ L  +M   + + PN
Sbjct: 295 TKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNES-IEPN 353

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T SS++ AC           IH   +K  +G    V NAL+ MY+  G +E ++  FD
Sbjct: 354 HLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFD 413

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  R+                      LL    ++ E    N  +      +    ++ 
Sbjct: 414 QLYERN----------------------LLSTSSDIGETGRSNASWSSQIESMDVGVSTF 451

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  ++L     +    KG+++HA +I+    +D  + ++LV MY++CG L+ A R FD M
Sbjct: 452 TFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEM 511

Query: 566 PV-RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
               NVI+W  II A   HG  +  L L  +M+  G     VKPN+VT+IA+ +ACSH G
Sbjct: 512 EDDHNVISWTSIISALAKHGHAERALSLFHDMILSG-----VKPNDVTYIAVLSACSHVG 566

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG + F  M+ D+ + P  +HYAC+VDLL R+G V++A + IN MP + D A  W +
Sbjct: 567 LVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKAD-ALVWKT 625

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLGACR ++N+EIGEIAA+++  LEP   + YVLLSN+Y+   LWD+   +R  M+   +
Sbjct: 626 LLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNL 685

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
            KE G SW+  G+ IH+F AGD SH ++++++  L  L   ++  GYVPDTS VLH++++
Sbjct: 686 SKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSD 745

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           + KE  L  HSEK+A+AFG++ T P   IR+ KNLRVC DCH A K+ISK   REIILRD
Sbjct: 746 KLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRD 805

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFH  K+G CSCG+YW
Sbjct: 806 SNRFHRMKDGKCSCGEYW 823



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 258/550 (46%), Gaps = 47/550 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV-AGIQDLSLGKQIHAH 102
           SW        R+   +EA++   EM  S ++P+ F   A   A   G    S G  +   
Sbjct: 113 SWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGF 172

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K G+  + V+V   L++M+ + G D+    KVF+ + E+  V W  MI    + G   
Sbjct: 173 AIKTGFWGTDVSVGCALIDMFARNG-DLVAARKVFNGLVERTVVVWTLMITRYVQGGCAG 231

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+E F  ML    EP  +T+ S+  AC+    +    LG+Q+H   LR+G   +T +  
Sbjct: 232 KAVELFLGMLEDGFEPDGYTMSSMVSACAE---QGSAGLGQQLHSLVLRLGLVSDTCVSC 288

Query: 222 ALMAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ-NDKFLEAVMFLRQMALR 277
            L+ MY KL     ++ A+ +FK     +++SW  ++S   Q   +   AV  L +M   
Sbjct: 289 GLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE 348

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            I+P+ ++ +S+L AC++L   D+G++IHA  ++  I   N  VG+ALV MY     +E 
Sbjct: 349 SIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVN-VVGNALVSMYAESGCMEE 407

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R+ FD + ++ +   ++ I   G++     + +      E   +  +  T +S++ A  
Sbjct: 408 ARKAFDQLYERNLLSTSSDIGETGRSNASWSSQI------ESMDVGVSTFTFASLLSAAA 461

Query: 398 RSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME-VRDTVSW 455
            +   P K + +H  +IK G   D+ + N+L+ MYSR G ++ +   FD+ME   + +SW
Sbjct: 462 -TVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISW 520

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
            ++I+     G    AL L  +M                  +   KPN +T + VL  C 
Sbjct: 521 TSIISALAKHGHAERALSLFHDM-----------------ILSGVKPNDVTYIAVLSACS 563

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-N 569
            +  + +GKE      R+M     ++      + +VD+ A+ G +  A    + MP + +
Sbjct: 564 HVGLVKEGKEY----FRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKAD 619

Query: 570 VITWNVIIMA 579
            + W  ++ A
Sbjct: 620 ALVWKTLLGA 629


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/731 (35%), Positives = 400/731 (54%), Gaps = 87/731 (11%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +TF  N L++ YAK G  + ++ L     D D VSW  I+   +Q   F  A+    +M 
Sbjct: 75  STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR------------------------ 311
              + P   ++++VL +C+  + LD G++IH++ ++                        
Sbjct: 135 SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPV 194

Query: 312 ------NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
                 + + + N    +AL+ +Y    + E     F+ + D+ I  WN+MI+GY Q  Y
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           + EAL++F KM     L P+  T++S++ AC   E     + IH + ++        V N
Sbjct: 255 NLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314

Query: 426 ALMDMYSRMGRIEI---------------------------------SKTIFDDMEVRDT 452
           AL+ MY++ G +EI                                 ++ IF+ +  RD 
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V+W  MI GY   G   DAL L R M N                   P+PNS TL  +L 
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNE-----------------GPEPNSYTLAAMLS 417

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL-MPVRNVI 571
              +L+ L  GK+IHA AI+   ++   V +AL+ MYAK G +N A+RVFDL    + ++
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +IMA   HG G+E + L + M++ G     +KP+ +T++ + +AC+H G+V +G  
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVG-----MKPDHITYVGVLSACTHVGLVEQGRK 532

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            +  M + + IEP+  HYAC++DL GRAG +++AY  I  MP E D   AW SLL +C+I
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI-AWGSLLASCKI 591

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N ++ ++AA+ L L++P  +  Y+ L+N+YS+   W+ A   RK MK+ GVRKE G S
Sbjct: 592 HKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           WI   +E+H F   D  H Q ++++  +  + E ++K G++PDT  VLH++ EE KE +L
Sbjct: 652 WIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQIL 711

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLAIAFG+LNTP  T +R+ KNLRVCNDCH A KFISK+  REII+RD  RFHHF
Sbjct: 712 KYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 771

Query: 872 KNGTCSCGDYW 882
           K+G+CSC DYW
Sbjct: 772 KDGSCSCRDYW 782



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 261/604 (43%), Gaps = 124/604 (20%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  +L+    I+D   G+ +H  ++K G  L  V + N L+  Y K GS  +  + VFD 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLG-VYLMNNLMTFYAKTGSLRF-AHHVFDE 70

Query: 140 ITEKDQVSWNSMIATLCR-------------------------------FGKWDLALEAF 168
           +  K   SWN++I+   +                               FG +D A+  F
Sbjct: 71  MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--------------- 213
             M+   V PS FT+ +V  +C   +    L +GR++H   +++G               
Sbjct: 131 AKMISERVPPSQFTVSNVLSSC---AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 214 -----------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
                              N    NAL+++Y + G+ + A + F+   DRD+VSWN+++S
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 257 SLSQNDKFLEA-VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
             SQ    LEA V+F + +    +KPD  ++AS+L AC++LE L+ GK+IHAY LR +  
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 316 IDNSFVGSALVDMYCNCREVEC---------------------------------GRRVF 342
              + VG+AL+ MY     VE                                   R +F
Sbjct: 308 TSGA-VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIF 366

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + D+ +  W AMI GY QN    +AL LF  M    G  PN+ T+++++         
Sbjct: 367 NKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVN-EGPEPNSYTLAAMLSVSSSLTIL 425

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD-DMEVRDTVSWNTMITG 461
              + IH  AIK G      V NAL+ MY++ G I ++K +FD     ++ VSW +MI  
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   +A+ L   M ++                   KP+ IT + VL  C  +  + 
Sbjct: 486 LAQHGLGKEAINLFERMLSVGM-----------------KPDHITYVGVLSACTHVGLVE 528

Query: 522 KGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G++ +      + +   +   + ++D+Y + G L  A    + MP+  + I W  ++ +
Sbjct: 529 QGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS 588

Query: 580 YGMH 583
             +H
Sbjct: 589 CKIH 592



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 227/501 (45%), Gaps = 87/501 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F  AI  + +M    + P  F    VL + A  Q L +G++IH+ V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G G S V VA +L+NMY KCG D      VFDR+T K+  +WN++I+   + G+++L
Sbjct: 169 VKLGLG-SCVPVATSLLNMYAKCG-DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFEL 226

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A   F                                +M+   +++P +FTL S+  AC+
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 192 NLSRRDGLRLGRQVHGNSLRV-GEWNTFIMNALMAMYAK--------------------- 229
           NL +   L +G+Q+H   LR   E +  + NAL++MYAK                     
Sbjct: 287 NLEK---LNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNI 343

Query: 230 ------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                       LG V  A+ +F    DRD+V+W  ++    QN  + +A+   R M   
Sbjct: 344 IAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE 403

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A++L   S L +L+ GK+IHA A++       S V +AL+ MY     +  
Sbjct: 404 GPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS-VTNALIAMYAKTGNINV 462

Query: 338 GRRVFDFISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +RVFD  + KK I  W +MI    Q+   +EA+ LF +M  V G+ P+  T   V+ AC
Sbjct: 463 AKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV-GMKPDHITYVGVLSAC 521

Query: 397 VRSEAFPDKEGIHG-----HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR- 450
                       +      H I+  L         ++D+Y R G ++ +    + M +  
Sbjct: 522 THVGLVEQGRKYYNMMTEVHEIEPTLSH----YACMIDLYGRAGLLQEAYLFIESMPIEP 577

Query: 451 DTVSWNTMITGYTICGQHGDA 471
           D ++W +++     C  H +A
Sbjct: 578 DNIAWGSLLAS---CKIHKNA 595



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 199/458 (43%), Gaps = 92/458 (20%)

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           TG    A+ + +++ + ++F  + L+  Y      E  RR+   + D     W A+I GY
Sbjct: 58  TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117

Query: 361 GQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Q    + A+ +F KM  E V    P+  T+S+V+ +C  ++       IH   +KLGLG
Sbjct: 118 NQFGLFDNAIWMFAKMISERVP---PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEV----------------------------- 449
               V  +L++MY++ G   I+K +FD M V                             
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234

Query: 450 --RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWN+MI+GY+  G + +AL++  +M              L+E  L  KP++ TL
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALVIFSKM--------------LNEPSL--KPDNFTL 278

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF---------- 557
            ++L  C  L  L  GK+IHAY +R    T   VG+AL+ MYAK G +            
Sbjct: 279 ASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRT 338

Query: 558 -----------------------ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                                  AR +F+ +  R+V+ W  +I+ Y  +G   + LEL +
Sbjct: 339 SNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFR 398

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            MV EG      +PN  T  A+ +  S   ++  G  + +      G   +P     ++ 
Sbjct: 399 LMVNEGP-----EPNSYTLAAMLSVSSSLTILEHGKQI-HASAIKAGESSTPSVTNALIA 452

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +  + G +  A ++ + +P    +  +W+S++ A   H
Sbjct: 453 MYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 163/351 (46%), Gaps = 35/351 (9%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   IK GL    Y+ N LM  Y++ G +  +  +FD+M ++ T SWNT+I+GY   G 
Sbjct: 32  VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91

Query: 468 HGDALMLLREMQNMEEEK--------NRNNVYDLDETVL------RPKPNSITLMTVLPG 513
              +  LL EM + +           N+  ++D    +       R  P+  T+  VL  
Sbjct: 92  FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSS 151

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C A   L  G++IH++ ++  L + V V ++L++MYAKCG    A+ VFD M V+N+ TW
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE--VTFIALFAACSHSGMVSEGMD 631
           N +I  Y   G+ +      + M           P+   V++ ++ +  S  G   E + 
Sbjct: 212 NALISLYMQSGQFELAASQFEKM-----------PDRDIVSWNSMISGYSQQGYNLEALV 260

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL-INMMPPEFDKAGA-WSSLLGAC 689
           +F KM ++  ++P     A ++       K+    Q+   ++  E + +GA  ++L+   
Sbjct: 261 IFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMY 320

Query: 690 RIHQNVEIGEIAAQ-----NLFLLE-PDVASHYVLLSNIYSSAQLWDKAMD 734
                VEI  +  +     NL ++    +   Y  L N+  + ++++K  D
Sbjct: 321 AKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 48/312 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  + +A+  +  M     +P+++   A+L   + +  L  GKQIHA  
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT-EKDQVSWNSMIATLCRFGKWD 162
           +K G   S+ +V N L+ MY K G ++    +VFD    +K+ VSW SMI  L + G   
Sbjct: 436 IKAGES-STPSVTNALIAMYAKTG-NINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGK 493

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN- 221
            A+  F  ML   ++P   T V V  AC+++     +  GR+ +     V E    + + 
Sbjct: 494 EAINLFERMLSVGMKPDHITYVGVLSACTHVGL---VEQGRKYYNMMTEVHEIEPTLSHY 550

Query: 222 -ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
             ++ +Y + G +                                EA +F+  M    I+
Sbjct: 551 ACMIDLYGRAGLLQ-------------------------------EAYLFIESMP---IE 576

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID--NSFVGSALVDMYCNCREVECG 338
           PD ++  S+L +C   +  D  K     A    +LID  NS    AL ++Y  C + E  
Sbjct: 577 PDNIAWGSLLASCKIHKNADLAK----VAAERLLLIDPGNSGAYLALANVYSACGKWENA 632

Query: 339 RRVFDFISDKKI 350
            +    + D+ +
Sbjct: 633 AQTRKLMKDRGV 644



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ +H   I+  L   V + + L+  YAK G L FA  VFD MP+++  +WN +I  Y  
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
            G  +    LL  M        +  P  V++ A+    +  G+    + +F KM
Sbjct: 89  QGNFEVSRRLLYEM-------PDCDP--VSWTAIIVGYNQFGLFDNAIWMFAKM 133


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/842 (33%), Positives = 465/842 (55%), Gaps = 37/842 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +   +E +  Y  + R  +  +  A   V+++   + D  LG Q+   V
Sbjct: 127 SWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSV 186

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   ++V+VAN+L++M+G C S + +   VFD + E+D +SWNS+I      G  + 
Sbjct: 187 IKSGLD-TTVSVANSLISMFGNCDS-IEEASCVFDDMKERDTISWNSIITASVHNGHCEK 244

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +LE F  M Y++ +    T+ ++   C +      LR GR +HG  ++ G E N  + N+
Sbjct: 245 SLEYFSQMRYTHAKTDYITISALLPVCGS---AQNLRWGRGLHGMVVKSGLESNVCVCNS 301

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY++ G+ +DA+ +F    +RDL+SWN++++S   N  +  A+  L +M       +
Sbjct: 302 LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATN 361

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  + L AC +LE L   K +HA+ +    L  N  +G+ALV MY     +   +RV 
Sbjct: 362 YVTFTTALSACYNLETL---KIVHAFVILLG-LHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             + D+    WNA+I G+  N+    A+  F  + E  G+  N  T+ +++ A +  +  
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLRE-EGVPVNYITIVNLLSAFLSPDDL 476

Query: 403 PDKE-GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            D    IH H +  G   + +VQ++L+ MY++ G +  S  IFD +  +++ +WN +++ 
Sbjct: 477 LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSA 536

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   +AL L+ +M        RN+   LD+         I         G L+ L 
Sbjct: 537 NAHYGPGEEALKLIIKM--------RNDGIHLDQFSFSVAHAII---------GNLTLLD 579

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+++H+  I++   ++  V +A +DMY KCG ++   R+      R+  +WN++I A  
Sbjct: 580 EGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALA 639

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG  Q+  E    M+  G     ++P+ VTF++L +ACSH G+V EG+  F  M   +G
Sbjct: 640 RHGFFQQAREAFHEMLDLG-----LRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFG 694

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQNVEIGEI 700
           +    +H  C++DLLGRAGK+ +A   IN MP P  D    W SLL AC+IH N+E+   
Sbjct: 695 VPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLV--WRSLLAACKIHGNLELARK 752

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA  LF L+    S YVL SN+ +S + W    +VRK+M+   ++K+P CSW++  +++ 
Sbjct: 753 AADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVT 812

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F  GD  H Q+ +++  LE L + +R+ GY+PDTS  L + +EE+KE  L  HSE++A+
Sbjct: 813 TFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIAL 872

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG++N+  G+ +R+ KNLRVC DCH   K +S+I  R+IILRD  RFHHF +G CSC D
Sbjct: 873 AFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSD 932

Query: 881 YW 882
           YW
Sbjct: 933 YW 934



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 168/687 (24%), Positives = 314/687 (45%), Gaps = 42/687 (6%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK-Q 98
           R + SW   +    R   +++A+  +  M    ++P ++   +++ A      ++ G  Q
Sbjct: 21  RNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQ 80

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW--DVYKVFDRITEKDQVSWNSMIATLC 156
           +HAHV+K G     V V  +L++ YG  G   W  +V  VF  I E + VSW S++    
Sbjct: 81  VHAHVIKCGLA-CDVFVGTSLLHFYGTFG---WVAEVDMVFKEIEEPNIVSWTSLMVGYA 136

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
             G     +  +R +    V  +   + +V  +C  L  +    LG QV G+ ++ G   
Sbjct: 137 YNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDK---MLGYQVLGSVIKSGLDT 193

Query: 217 TF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           T  + N+L++M+     +++A  +F   ++RD +SWN+I+++   N    +++ +  QM 
Sbjct: 194 TVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMR 253

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
               K D ++I+++LP C   + L  G+ +H   +++  L  N  V ++L+ MY    + 
Sbjct: 254 YTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSG-LESNVCVCNSLLSMYSQAGKS 312

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E    VF  + ++ +  WN+M+  +  N     AL L I+M +      N  T ++ + A
Sbjct: 313 EDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA-TNYVTFTTALSA 371

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C   E     + +H   I LGL  +  + NAL+ MY + G +  ++ +   M  RD V+W
Sbjct: 372 CYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N +I G+    +   A+     ++      N   + +L    L P               
Sbjct: 429 NALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPD-------------- 474

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
               L  G  IHA+ +      +  V S+L+ MYA+CG LN +  +FD++  +N  TWN 
Sbjct: 475 --DLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNA 532

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           I+ A   +G G+E L+L+  M  +G     +  ++ +F    A   +  ++ EG  L + 
Sbjct: 533 ILSANAHYGPGEEALKLIIKMRNDG-----IHLDQFSFSVAHAIIGNLTLLDEGQQL-HS 586

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           +   +G E +       +D+ G+ G+++D ++++    P      +W+ L+ A   H   
Sbjct: 587 LIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQ--PRSRSQRSWNILISALARHGFF 644

Query: 696 EIGEIAAQNL--FLLEPDVASHYVLLS 720
           +    A   +    L PD  +   LLS
Sbjct: 645 QQAREAFHEMLDLGLRPDHVTFVSLLS 671



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 248/500 (49%), Gaps = 33/500 (6%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MY K GS +     VFD++ E+++ SWN++++   R G +  A++ F  ML   V PSS+
Sbjct: 1   MYSKFGS-IEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59

Query: 182 TLVSVALACSNLSRRDGLRLGR-QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
              S+  AC    R   +  G  QVH + ++ G   + F+  +L+  Y   G V +   +
Sbjct: 60  VAASLVTAC---DRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMV 116

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           FK  E+ ++VSW +++   + N    E +   R++   G+  +  ++A+V+ +C  L   
Sbjct: 117 FKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDK 176

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G ++    +++ +    S V ++L+ M+ NC  +E    VFD + ++    WN++IT 
Sbjct: 177 MLGYQVLGSVIKSGLDTTVS-VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA 235

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
              N + E++L  F +M        +  T+S+++P C  ++      G+HG  +K GL  
Sbjct: 236 SVHNGHCEKSLEYFSQMRYTHAK-TDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLES 294

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           +  V N+L+ MYS+ G+ E ++ +F  M  RD +SWN+M+  +   G +  AL LL EM 
Sbjct: 295 NVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEML 354

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                              R   N +T  T L  C  L  L   K +HA+ I   L  ++
Sbjct: 355 QT-----------------RKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNL 394

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           ++G+ALV MY K G +  A+RV  +MP R+ +TWN +I  +  + E    +E    +  E
Sbjct: 395 IIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREE 454

Query: 600 GSRGGEVKPNEVTFIALFAA 619
           G     V  N +T + L +A
Sbjct: 455 G-----VPVNYITIVNLLSA 469


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/775 (35%), Positives = 426/775 (54%), Gaps = 51/775 (6%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y   G D+     +F     ++  +W  M+      G+   AL  FR ML   V
Sbjct: 78  NLILSAYSSSG-DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGV 136

Query: 177 EPSSFTLVSVA--LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            P   T+ +V     C+  S          +H  +++ G + + F+ N L+  Y K G +
Sbjct: 137 IPDRVTVTTVLNLPGCTVPS----------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F    D+D V++N ++   S+     +A+     M   GI     + +S+L   
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVA 246

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + +  L  G ++HA  LR+  ++ N FV ++L+D Y  C  ++  RR+FD + ++    +
Sbjct: 247 AGMAHLLLGHQVHALVLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPD---KEG 407
           N +I  Y  N+     L LF +M+++     + P AT +S        + + PD    + 
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV-------AGSLPDVHIGKQ 358

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH   + LGL  +  + NAL+DMYS+ G ++ +K+ F +   +  +SW  +ITGY   GQ
Sbjct: 359 IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 418

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           H +AL L  +M+       R  +          +P+  T  +++    +L+ +  G+++H
Sbjct: 419 HEEALQLFSDMR-------RAGL----------RPDRATFSSIIKASSSLAMIGLGRQLH 461

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           +Y IR+   + V  GS LVDMYAKCGCL+ A R FD MP RN I+WN +I AY  +GE +
Sbjct: 462 SYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAK 521

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             +++ + M+  G       P+ VTF+++ AACSH+G+  E M  F+ MK  Y I P  +
Sbjct: 522 NAIKMFEGMLHCG-----FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HYACV+D LGR G      +++  MP + D    W+S+L +CRIH N E+  +AA  LF 
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGNQELARVAADKLFG 635

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           +EP  A+ YV+LSNIY+ A  W+ A  V+K M++ GVRKE G SW+E   +I+ F + D 
Sbjct: 636 MEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDL 695

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +    +++   L+ L + M K+GY PD +C LH V+ E K   L  HSE+LAIAF ++NT
Sbjct: 696 TSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNT 755

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P GT IR+ KNL  C DCH   K ISKI +R+II+RD RRFHHFK+G CSCGDYW
Sbjct: 756 PAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 38/476 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F +N +++ Y+  G +  A+ LF S   R+  +W  ++ + +   +  +A+   R M 
Sbjct: 73  NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132

Query: 276 LRGIKPDGVSIASV--LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
             G+ PD V++ +V  LP C       T   +H +A++   L  + FV + L+D YC   
Sbjct: 133 GEGVIPDRVTVTTVLNLPGC-------TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHG 184

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   RRVF  + DK    +NAM+ G  +     +AL LF  M   AG+     T SS++
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRR-AGIPATHFTFSSIL 243

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                         +H   ++     + +V N+L+D YS+   ++  + +FD+M  RD V
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           S+N +I  Y         L L REMQ +            D  VL          T+L  
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKL----------GFDRQVL-------PYATMLSV 346

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
            G+L  +  GK+IHA  +   LA++ ++G+AL+DMY+KCG L+ A+  F     ++ I+W
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
             +I  Y  +G+ +E L+L  +M     R   ++P+  TF ++  A S   M+  G  L 
Sbjct: 407 TALITGYVQNGQHEEALQLFSDM-----RRAGLRPDRATFSSIIKASSSLAMIGLGRQLH 461

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            Y ++  Y  + S    + +VD+  + G +++A +  + MP     + +W++++ A
Sbjct: 462 SYLIRSGY--KSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER--NSISWNAVISA 513



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 214/421 (50%), Gaps = 27/421 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  +  M R+ I   +F F ++L   AG+  L LG Q+HA V++    + +V V N+L
Sbjct: 219 QALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR-STSVLNVFVNNSL 277

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM----LYSN 175
           ++ Y KC   + D+ ++FD + E+D VS+N +IA           L  FR M        
Sbjct: 278 LDFYSKCDC-LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVD 234
           V P + T++SVA +  +      + +G+Q+H   + +G  +  ++ NAL+ MY+K G +D
Sbjct: 337 VLPYA-TMLSVAGSLPD------VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            AK+ F +  ++  +SW  +++   QN +  EA+     M   G++PD  + +S++ A S
Sbjct: 390 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASS 449

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            L M+  G+++H+Y +R+     + F GS LVDMY  C  ++   R FD + ++    WN
Sbjct: 450 SLAMIGLGRQLHSYLIRSG-YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 508

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           A+I+ Y      + A+ +F  M    G  P++ T  SV+ AC  +    D+   + H +K
Sbjct: 509 AVISAYAHYGEAKNAIKMFEGMLH-CGFNPDSVTFLSVLAACSHN-GLADECMKYFHLMK 566

Query: 415 ----LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
               +   ++ Y    ++D   R+G     + +  +M  + D + W +++     C  HG
Sbjct: 567 HQYSISPWKEHYA--CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS---CRIHG 621

Query: 470 D 470
           +
Sbjct: 622 N 622



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ Q  EA+  + +M R+ ++PD   F +++KA + +  + LG+Q+H+++
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GY  SSV   + LV+MY KCG  + +  + FD + E++ +SWN++I+    +G+   
Sbjct: 465 IRSGYK-SSVFSGSVLVDMYAKCGC-LDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 522

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++ F  ML+    P S T +SV  ACS+
Sbjct: 523 AIKMFEGMLHCGFNPDSVTFLSVLAACSH 551


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 273/759 (35%), Positives = 426/759 (56%), Gaps = 53/759 (6%)

Query: 155 LCRFGKWDLALEAFRMM--LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-R 211
           L +F +   ++++ ++      +V PS F   + A A  +  ++D    G+ +H   L R
Sbjct: 8   LIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
            G  + F  N L+ MY K   + DA  LF    +R+ +S+ T++   +++ +FLEA+   
Sbjct: 68  GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA--YALRNDILIDNSFVGSALVDMY 329
            ++   G + +     ++L      +  + G  IHA  + L ++    N+FVG+AL+D Y
Sbjct: 128 VRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHE---SNAFVGTALIDAY 184

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  V+  R VFD I  K +  W  M+T + +N+  +EAL LF +M  V G  PN  T 
Sbjct: 185 SVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMV-GFKPNNFTF 243

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +SV  AC+  EAF   + +HG A+K     D YV  AL+D+Y++ G I+ ++  F+++  
Sbjct: 244 ASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPK 303

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +D + W+ MI  Y    Q  +A+ +  +M+                 VL   PN  T  +
Sbjct: 304 KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ--------------ALVL---PNQFTFAS 346

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           VL  C  +  L  G +IH + I+  L +DV V +AL+D+YAKCG +  +  +F   P RN
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 406

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE------------------------ 605
            +TWN +I+ +   G+G++ L L  NM+    +  E                        
Sbjct: 407 DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHS 466

Query: 606 --VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             VKP+++TF+ + +AC+++G++ +G   F  M  D+GIEP  +HY C+V LLGR G ++
Sbjct: 467 LTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 526

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
            A +LI+ +P +      W +LLGAC IH ++E+G I+AQ +  +EP   + +VLLSN+Y
Sbjct: 527 KAVKLIDEIPFQ-PSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMY 585

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           ++A+ WD    VRK MK  GV+KEPG SWIE    +H F  GD SH +   ++G LE L 
Sbjct: 586 ATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLH 645

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
            + +K GY+P+ + VL +V +EEKE LL  HSE+LA++FGI+ TP G+ IR+ KNLR+C 
Sbjct: 646 MKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICV 705

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH A K ISK+  REI++RD+ RFHHF+ G CSCGDYW
Sbjct: 706 DCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 187/373 (50%), Gaps = 10/373 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++  ++  A S +F EAI  ++ + R   + + F F  +LK +       LG  IHA +
Sbjct: 106 SFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACI 165

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
            K G+  S+  V   L++ Y  CG    DV + VFD I  KD VSW  M+        + 
Sbjct: 166 FKLGHE-SNAFVGTALIDAYSVCGRV--DVAREVFDGILYKDMVSWTGMVTCFAENDCFK 222

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+ F  M     +P++FT  SV  AC  L   D   +G+ VHG +L+   E + ++  
Sbjct: 223 EALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFD---VGKSVHGCALKSRYELDLYVGV 279

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ +Y K G +DDA+  F+    +D++ W+ +++  +Q+D+  EAV    QM    + P
Sbjct: 280 ALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + ASVL AC+ +E L+ G +IH + ++  +  D  FV +AL+D+Y  C  +E    +
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD-VFVSNALMDVYAKCGRMENSMEL 398

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F     +    WN +I G+ Q    E+AL LF+ M E   +     T SS + AC    A
Sbjct: 399 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYR-VQATEVTYSSALRACASLAA 457

Query: 402 FPDKEGIHGHAIK 414
                 IH   +K
Sbjct: 458 LEPGLQIHSLTVK 470



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A ++ F+EA+  + +M     +P+NF F +V KA  G++   +GK +H   
Sbjct: 207 SWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCA 266

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  Y L  + V   L+++Y K G D+ D  + F+ I +KD + W+ MIA   +  +   
Sbjct: 267 LKSRYEL-DLYVGVALLDLYTKSG-DIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKE 324

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+E F  M  + V P+ FT  SV  AC+ +   +GL LG Q+H + +++G   + F+ NA
Sbjct: 325 AVEMFFQMRQALVLPNQFTFASVLQACATM---EGLNLGNQIHCHVIKIGLHSDVFVSNA 381

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV---SSLSQNDKFLEAVMFLRQMALRGI 279
           LM +YAK GR++++  LF     R+ V+WNT++     L   +K L   +FL  +  R +
Sbjct: 382 LMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALR--LFLNMLEYR-V 438

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           +   V+ +S L AC+ L  L+ G +IH+  ++ D L   +FVG
Sbjct: 439 QATEVTYSSALRACASLAALEPGLQIHSLTVKPDKL---TFVG 478



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 8/198 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+S+Q +EA+  + +M ++ + P+ F F +VL+A A ++ L+LG QIH HV+
Sbjct: 309 WSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G   S V V+N L+++Y KCG  M +  ++F     ++ V+WN++I    + G  + A
Sbjct: 369 KIGLH-SDVFVSNALMDVYAKCGR-MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKA 426

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           L  F  ML   V+ +  T  S   AC++L+    L  G Q+H  +++  +  TF+   ++
Sbjct: 427 LRLFLNMLEYRVQATEVTYSSALRACASLA---ALEPGLQIHSLTVKPDKL-TFV--GVL 480

Query: 225 AMYAKLGRVDDAKTLFKS 242
           +  A  G +D  +  F S
Sbjct: 481 SACANAGLLDQGQAYFTS 498


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/731 (35%), Positives = 399/731 (54%), Gaps = 87/731 (11%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +TF  N L++ YAK G  + ++ L     D D VSW  I+   +Q   F  A+    +M 
Sbjct: 75  STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR------------------------ 311
              + P   ++++VL +C+  + LD G++IH++ ++                        
Sbjct: 135 SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPV 194

Query: 312 ------NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
                 + + + N    +AL+ +Y    + E     F+ + D+ I  WN+MI+GY Q  Y
Sbjct: 195 IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGY 254

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           + EAL +F KM     L P+  T++S++ AC   E     + IH + ++        V N
Sbjct: 255 NLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314

Query: 426 ALMDMYSRMGRIEI---------------------------------SKTIFDDMEVRDT 452
           AL+ MY++ G +EI                                 ++ IF+ +  RD 
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V+W  MI GY   G   DAL L R M N                   P+PNS TL  +L 
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNE-----------------GPEPNSYTLAAMLS 417

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL-MPVRNVI 571
              +L+ L  GK+IHA AI+   ++   V +AL+ MYAK G +N A+RVFDL    + ++
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +IMA   HG G+E + L + M++ G     +KP+ +T++ + +AC+H G+V +G  
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVG-----MKPDHITYVGVLSACTHVGLVEQGRK 532

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            +  M + + IEP+  HYAC++DL GRAG +++AY  I  MP E D   AW SLL +C+I
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI-AWGSLLASCKI 591

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N ++ ++AA+ L L++P  +  Y+ L+N+YS+   W+ A   RK MK+ GVRKE G S
Sbjct: 592 HKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           WI   +E+H F   D  H Q ++++  +  + E ++K G++PDT  VLH++ EE KE +L
Sbjct: 652 WIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQIL 711

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLAIAFG+LNTP  T +R+ KNLRVCNDCH A KFISK+  REII+RD  RFHHF
Sbjct: 712 KYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHF 771

Query: 872 KNGTCSCGDYW 882
           K+G+CSC DYW
Sbjct: 772 KDGSCSCRDYW 782



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 261/604 (43%), Gaps = 124/604 (20%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  +L+    I+D   G+ +H  ++K G  L  V + N L+  Y K GS  +  + VFD 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLG-VYLMNNLMTFYAKTGSLRF-AHHVFDE 70

Query: 140 ITEKDQVSWNSMIATLCR-------------------------------FGKWDLALEAF 168
           +  K   SWN++I+   +                               FG +D A+  F
Sbjct: 71  MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--------------- 213
             M+   V PS FT+ +V  +C   +    L +GR++H   +++G               
Sbjct: 131 AKMISERVPPSQFTVSNVLSSC---AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 214 -----------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
                              N    NAL+++Y + G+ + A + F+   DRD+VSWN+++S
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 257 SLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
             SQ    LEA+ +F + +    +KPD  ++AS+L AC++LE L+ GK+IHAY LR +  
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 316 IDNSFVGSALVDMYCNCREVEC---------------------------------GRRVF 342
              + VG+AL+ MY     VE                                   R +F
Sbjct: 308 TSGA-VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIF 366

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + D+ +  W AMI GY QN    +AL LF  M    G  PN+ T+++++         
Sbjct: 367 NKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVN-EGPEPNSYTLAAMLSVSSSLTIL 425

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD-DMEVRDTVSWNTMITG 461
              + IH  AIK G      V NAL+ MY++ G I ++K +FD     ++ VSW +MI  
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   +A+ L   M ++                   KP+ IT + VL  C  +  + 
Sbjct: 486 LAQHGLGKEAINLFERMLSVGM-----------------KPDHITYVGVLSACTHVGLVE 528

Query: 522 KGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G++ +      + +   +   + ++D+Y + G L  A    + MP+  + I W  ++ +
Sbjct: 529 QGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS 588

Query: 580 YGMH 583
             +H
Sbjct: 589 CKIH 592



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 227/501 (45%), Gaps = 87/501 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F  AI  + +M    + P  F    VL + A  Q L +G++IH+ V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G G S V VA +L+NMY KCG D      VFDR+T K+  +WN++I+   + G+++L
Sbjct: 169 VKLGLG-SCVPVATSLLNMYAKCG-DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFEL 226

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A   F                                +M+   +++P +FTL S+  AC+
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 192 NLSRRDGLRLGRQVHGNSLRV-GEWNTFIMNALMAMYAK--------------------- 229
           NL +   L +G+Q+H   LR   E +  + NAL++MYAK                     
Sbjct: 287 NLEK---LNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNI 343

Query: 230 ------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                       LG V  A+ +F    DRD+V+W  ++    QN  + +A+   R M   
Sbjct: 344 IAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE 403

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A++L   S L +L+ GK+IHA A++       S V +AL+ MY     +  
Sbjct: 404 GPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS-VTNALIAMYAKTGNINV 462

Query: 338 GRRVFDFISDKK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +RVFD  + KK I  W +MI    Q+   +EA+ LF +M  V G+ P+  T   V+ AC
Sbjct: 463 AKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV-GMKPDHITYVGVLSAC 521

Query: 397 VRSEAFPDKEGIHG-----HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR- 450
                       +      H I+  L         ++D+Y R G ++ +    + M +  
Sbjct: 522 THVGLVEQGRKYYNMMTEVHEIEPTLSH----YACMIDLYGRAGLLQEAYLFIESMPIEP 577

Query: 451 DTVSWNTMITGYTICGQHGDA 471
           D ++W +++     C  H +A
Sbjct: 578 DNIAWGSLLAS---CKIHKNA 595



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 198/458 (43%), Gaps = 92/458 (20%)

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           TG    A+ + +++ + ++F  + L+  Y      E  RR+   + D     W A+I GY
Sbjct: 58  TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117

Query: 361 GQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Q    + A+ +F KM  E V    P+  T+S+V+ +C  ++       IH   +KLGLG
Sbjct: 118 NQFGLFDNAIWMFAKMISERVP---PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEV----------------------------- 449
               V  +L++MY++ G   I+K +FD M V                             
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234

Query: 450 --RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWN+MI+GY+  G + +AL +  +M              L+E  L  KP++ TL
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALAIFSKM--------------LNEPSL--KPDNFTL 278

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF---------- 557
            ++L  C  L  L  GK+IHAY +R    T   VG+AL+ MYAK G +            
Sbjct: 279 ASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRT 338

Query: 558 -----------------------ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                                  AR +F+ +  R+V+ W  +I+ Y  +G   + LEL +
Sbjct: 339 SNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFR 398

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            MV EG      +PN  T  A+ +  S   ++  G  + +      G   +P     ++ 
Sbjct: 399 LMVNEGP-----EPNSYTLAAMLSVSSSLTILEHGKQI-HASAIKAGESSTPSVTNALIA 452

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +  + G +  A ++ + +P    +  +W+S++ A   H
Sbjct: 453 MYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 163/351 (46%), Gaps = 35/351 (9%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   IK GL    Y+ N LM  Y++ G +  +  +FD+M ++ T SWNT+I+GY   G 
Sbjct: 32  VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91

Query: 468 HGDALMLLREMQNMEEEK--------NRNNVYDLDETVL------RPKPNSITLMTVLPG 513
              +  LL EM + +           N+  ++D    +       R  P+  T+  VL  
Sbjct: 92  FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSS 151

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C A   L  G++IH++ ++  L + V V ++L++MYAKCG    A+ VFD M V+N+ TW
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE--VTFIALFAACSHSGMVSEGMD 631
           N +I  Y   G+ +      + M           P+   V++ ++ +  S  G   E + 
Sbjct: 212 NALISLYMQSGQFELAASQFEKM-----------PDRDIVSWNSMISGYSQQGYNLEALA 260

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL-INMMPPEFDKAGA-WSSLLGAC 689
           +F KM ++  ++P     A ++       K+    Q+   ++  E + +GA  ++L+   
Sbjct: 261 IFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMY 320

Query: 690 RIHQNVEIGEIAAQ-----NLFLLE-PDVASHYVLLSNIYSSAQLWDKAMD 734
                VEI  +  +     NL ++    +   Y  L N+  + ++++K  D
Sbjct: 321 AKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 48/312 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  + +A+  +  M     +P+++   A+L   + +  L  GKQIHA  
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASA 435

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT-EKDQVSWNSMIATLCRFGKWD 162
           +K G   S+ +V N L+ MY K G ++    +VFD    +K+ VSW SMI  L + G   
Sbjct: 436 IKAGES-STPSVTNALIAMYAKTG-NINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGK 493

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN- 221
            A+  F  ML   ++P   T V V  AC+++     +  GR+ +     V E    + + 
Sbjct: 494 EAINLFERMLSVGMKPDHITYVGVLSACTHVGL---VEQGRKYYNMMTEVHEIEPTLSHY 550

Query: 222 -ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
             ++ +Y + G +                                EA +F+  M    I+
Sbjct: 551 ACMIDLYGRAGLLQ-------------------------------EAYLFIESMP---IE 576

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID--NSFVGSALVDMYCNCREVECG 338
           PD ++  S+L +C   +  D  K     A    +LID  NS    AL ++Y  C + E  
Sbjct: 577 PDNIAWGSLLASCKIHKNADLAK----VAAERLLLIDPGNSGAYLALANVYSACGKWENA 632

Query: 339 RRVFDFISDKKI 350
            +    + D+ +
Sbjct: 633 AQTRKLMKDRGV 644



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ +H   I+  L   V + + L+  YAK G L FA  VFD MP+++  +WN +I  Y  
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
            G  +    LL  M        +  P  V++ A+    +  G+    + +F KM
Sbjct: 89  QGNFEVSRRLLYEM-------PDCDP--VSWTAIIVGYNQFGLFDNAIWMFAKM 133


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/657 (39%), Positives = 385/657 (58%), Gaps = 55/657 (8%)

Query: 250 SW-NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG------VSIASVLPACSHLEMLDTG 302
           SW + I  + SQ D      +FLR   +R   P         S+   L +C+ L +   G
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLR---MRASDPAAACSSVLTSLPGALKSCAALGLRALG 77

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCRE--------------VECGRRVFDFISDK 348
             +HA ALR+    D  F  +AL+++YC                  +E  R+VFD + +K
Sbjct: 78  ASLHALALRSGAFADR-FAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK 136

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WN ++ G  ++    EAL L  +M    G  P++ T+SSV+P             +
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWR-DGCKPDSFTLSSVLPIFAEGADVRRGMEL 195

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG A + G   D +V ++L+DMY+   R + S  +FD++ VRD + WN+M+ G   C Q+
Sbjct: 196 HGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG---CAQN 252

Query: 469 G---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +AL L R M +               + ++P P  +T  +++P CG L++L  GK+
Sbjct: 253 GSVDEALGLFRRMLH---------------SGIKPMP--VTFSSLIPACGNLASLLLGKQ 295

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +HAY IR     +V + S+L+DMY KCG ++ ARR+FD +   ++++W  +IM + +HG 
Sbjct: 296 LHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGP 355

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E L L   M       G +KPN +TF+A+  ACSH+G+V +G   F  M D YGI PS
Sbjct: 356 AREALVLFDRM-----ELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPS 410

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +H+A + D LGR GK+E+AY  I+ M  +   A  WS+LL AC++H+N  + E  A+ +
Sbjct: 411 LEHHAALADTLGRPGKLEEAYNFISGMKIK-PTASVWSTLLRACKVHKNTVLAEEVAKKI 469

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F LEP     +++LSN YSS+  W++A  +RK M++ G++KEP CSWIE  ++ H F+A 
Sbjct: 470 FDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAH 529

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH   E++   L   SE+M ++GYVP+T  V  ++ EE+K ++LCGHSEKLAI FGI+
Sbjct: 530 DKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGII 589

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +TPPGTTIRV KNLRVC DCH  TKFISKI  REI++RD  RFHHFK+G CSCGD+W
Sbjct: 590 STPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 220/451 (48%), Gaps = 31/451 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDN----FAFPAVLKAVAGIQDLSLGKQI 99
           SW   +R  A    F  AI  ++ M  SD          + P  LK+ A +   +LG  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSD-------------MWDVYKVFDRITEKDQV 146
           HA  ++ G   +    AN L+N+Y K  +              +  V KVFD + EKD V
Sbjct: 81  HALALRSG-AFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SWN+++      G+   AL   R M     +P SFTL SV       +    +R G ++H
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV---LPIFAEGADVRRGMELH 196

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           G + R G   + F+ ++L+ MYA   R D +  +F +   RD + WN++++  +QN    
Sbjct: 197 GFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVD 256

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+   R+M   GIKP  V+ +S++PAC +L  L  GK++HAY +R      N F+ S+L
Sbjct: 257 EALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG-FDGNVFISSSL 315

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +DMYC C  V   RR+FD I    I  W AMI G+  +    EAL+LF +M E+  L PN
Sbjct: 316 IDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRM-ELGNLKPN 374

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTI 443
             T  +V+ AC  +    DK   + +++    G+        AL D   R G++E +   
Sbjct: 375 HITFLAVLTACSHA-GLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNF 433

Query: 444 FDDMEVRDTVS-WNTMITGYTICGQHGDALM 473
              M+++ T S W+T++     C  H + ++
Sbjct: 434 ISGMKIKPTASVWSTLLRA---CKVHKNTVL 461


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 283/787 (35%), Positives = 435/787 (55%), Gaps = 39/787 (4%)

Query: 113 VTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           VT  N++V   G C S  M D + +F ++ +++ V+W  MI+   R  +     + FRMM
Sbjct: 157 VTSWNSMVT--GYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK- 229
            +    P      SV  A + L     L + R +    L+ G E +  I  +++ +Y + 
Sbjct: 215 HHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL---VLKTGFESDVVIGTSILNVYTRD 271

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
              +D A   F    +R+  +W+T++++LS   +   A+    +  ++ I P   ++ + 
Sbjct: 272 ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTG 330

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L  C        G+   A  L   I        +A++  Y     V+  + +FD +  + 
Sbjct: 331 LARC--------GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRN 382

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
              W  MI GY QN   EEAL L   +    G+ P+ ++++S   AC    A      +H
Sbjct: 383 TISWAGMIAGYAQNGRSEEALDLLQALHR-NGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             A+K G   + YV NAL+ MY +   +E  + +F+ M V+DTVSWN+ I          
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501

Query: 470 DALMLLREMQNME------------EEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCG 515
           DA  +   M + +            + +  +   +  +T+L    KPNS  L  +L  CG
Sbjct: 502 DARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L +   G++IH  AI++ + ++++V +AL+ MY KCGC + + +VFD M  R++ TWN 
Sbjct: 562 GLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNT 620

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
            I     HG G+E +++ ++M + G     V PNEVTF+ L  ACSH+G+V EG   F  
Sbjct: 621 FITGCAQHGLGREAIKMYEHMESVG-----VLPNEVTFVGLLNACSHAGLVDEGWQFFKS 675

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M  DYG+ P  +HYAC+VDLLGR G V+ A + I  MP E D    WS+LLGAC+IH+N 
Sbjct: 676 MSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTV-IWSALLGACKIHKNA 734

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           EIG  AA+ LF  EP  A +YV+LSNIYSS  +W +  ++RK MK+ GV KEPGCSW++ 
Sbjct: 735 EIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQI 794

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
            +++H F+ GD  H++ E++   L++L   +R  GYVPDT  VLH+++EE+KE+ L  HS
Sbjct: 795 RNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHS 854

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLA+A+G+L TP G  I++ KNLR+C DCH   KF+S +  R+I +RD  RFHHF+NG+
Sbjct: 855 EKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGS 914

Query: 876 CSCGDYW 882
           CSCGD+W
Sbjct: 915 CSCGDFW 921



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 263/576 (45%), Gaps = 62/576 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    R  Q  +    +  M      PD   F +VL AV G+QDL + + +   V
Sbjct: 190 TWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLV 249

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S V +  +++N+Y +  S +    K FD + E+++ +W++MIA L   G+ D 
Sbjct: 250 LKTGFE-SDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  +      ++ PS   L++    C  ++  +   L  Q+      V  W     NA+
Sbjct: 309 AIAVYGRDPVKSI-PSQTALLTGLARCGRIT--EARILFEQIPDPI--VVSW-----NAM 358

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +  Y + G VD+AK LF     R+ +SW  +++  +QN +  EA+  L+ +   G+ P  
Sbjct: 359 ITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSL 418

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            S+ S   ACSH+  L+TG+++H+ A++      NS+V +AL+ MY  CR +E  R+VF+
Sbjct: 419 SSLTSSFLACSHIGALETGRQVHSLAVKAGCQF-NSYVCNALISMYGKCRNMEYVRQVFN 477

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKM---------------------EEVAGL 382
            +  K    WN+ I    QN   E+A  +F  M                     +E    
Sbjct: 478 RMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEF 537

Query: 383 W---------PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           +         PN+  ++ ++  C    +    + IH  AIK G+  +  V NALM MY +
Sbjct: 538 FKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFK 597

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G  + S  +FD ME RD  +WNT ITG   C QHG    L RE   M E      V   
Sbjct: 598 CGCAD-SHKVFDSMEERDIFTWNTFITG---CAQHG----LGREAIKMYEHMESVGVL-- 647

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKC 552
                   PN +T + +L  C     + +G +      R+   T ++   A +VD+  + 
Sbjct: 648 --------PNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRT 699

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           G +  A +    MP+  + + W+ ++ A  +H   +
Sbjct: 700 GDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAE 735



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 243/548 (44%), Gaps = 86/548 (15%)

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           A+LGR+ +A+ +F +   RD+++WN+++S+   N   LE    L       I    V  A
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYC-NSGMLEDARIL----FDAISGGNVRTA 98

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           ++L +         G+ + A  + + +   N+   +A+V  Y    ++   RR+FD +  
Sbjct: 99  TILLS----GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPS 154

Query: 348 KKIALWNAMITGYGQNEYDEEALMLF------------------IKMEEVAGLW------ 383
           + +  WN+M+TGY  +    +A  LF                  +++E+    W      
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214

Query: 384 ------PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR-MGR 436
                 P+ +  +SV+ A    +     E +    +K G   D  +  +++++Y+R    
Sbjct: 215 HHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASA 274

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           ++I+   FD M  R+  +W+TMI   +  G+   A+                 VY  D  
Sbjct: 275 LDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIA----------------VYGRDP- 317

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCL 555
            ++  P+   L+T L  CG ++         A  +   +   +VV  +A++  Y + G +
Sbjct: 318 -VKSIPSQTALLTGLARCGRIT--------EARILFEQIPDPIVVSWNAMITGYMQNGMV 368

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A+ +FD MP RN I+W  +I  Y  +G  +E L+LL+ +   G     + P+  +  +
Sbjct: 369 DEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNG-----MLPSLSSLTS 423

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMMP 673
            F ACSH G +  G  + + +    G + +   Y C  ++ + G+   +E   Q+ N M 
Sbjct: 424 SFLACSHIGALETGRQV-HSLAVKAGCQFNS--YVCNALISMYGKCRNMEYVRQVFNRM- 479

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQLWDK 731
                  +W+S + A   +  +E     A+++F  +L  DV S   ++S  Y+ A+  D+
Sbjct: 480 -RVKDTVSWNSFIAALVQNNMLE----DARHIFDNMLSRDVVSWTTIIS-AYAQAERGDE 533

Query: 732 AMDVRKKM 739
           A++  K M
Sbjct: 534 AVEFFKTM 541



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 35/234 (14%)

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D+   +A +   +R+GR+  ++ +FD M  RD ++WN+MI+ Y   G   DA +L   + 
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                                  N  T   +L G   L  +   + +       M   + 
Sbjct: 92  G---------------------GNVRTATILLSGYARLGRVLDARRV----FDGMPERNT 126

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           V  +A+V  Y + G +  ARR+FD MP R+V +WN ++  Y    +  +   L K M   
Sbjct: 127 VAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQM--- 183

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
                  + N VT+  + +         +G D+F  M  + G  P   ++A V+
Sbjct: 184 ------PQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHE-GASPDQSNFASVL 230



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 25/211 (11%)

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           A D    SA +   A+ G L  AR VFD MP R++I WN +I AY   G  ++   L   
Sbjct: 30  ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF-- 87

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
              +   GG V+    T   L +  +  G V +   +F  M      E +   +  +V  
Sbjct: 88  ---DAISGGNVR----TATILLSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSC 135

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLFLLEP--DV 712
             + G +  A +L + MP       +W+S++ G C   Q V+     A NLF   P  ++
Sbjct: 136 YVQNGDITMARRLFDAMPSR--DVTSWNSMVTGYCHSRQMVD-----AWNLFKQMPQRNL 188

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
            +  V++S  Y   +   K  D+ + M   G
Sbjct: 189 VTWTVMISG-YVRIEQHGKGWDIFRMMHHEG 218


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 288/808 (35%), Positives = 445/808 (55%), Gaps = 36/808 (4%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           PD  A+ A+ +     + +  G +  AH     +    + + N +++M  + G + W  +
Sbjct: 92  PDEDAYVALFRLCEWRRAVEPGLRACAHADDR-HAWFGLRLGNAMLSMLVRFG-ETWHAW 149

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VF ++ E+D  SWN M+    + G  + AL+ +  M+++ V P  +T   V  +C  + 
Sbjct: 150 RVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 209

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
                R+GR+VH + LR G      ++NALM MYAK G V  A+ +F S    D +SWN 
Sbjct: 210 ---DWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNA 266

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++   +N +    +     M    ++P+ ++I SV  A   L  +   KE+H  A++  
Sbjct: 267 MIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRG 326

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D +F  S L+ MY +   +   R VF  +  +    W AMI+GY +N + ++AL ++
Sbjct: 327 FATDVAFCNS-LIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVY 385

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             ME V  + P+  T++S + AC    +      +H  A   G      V NAL++MY++
Sbjct: 386 ALME-VNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAK 444

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             RI+ +  +F  M  +D VSW++MI G+    ++ +AL   R M               
Sbjct: 445 SKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--------------- 489

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
              +   KPNS+T +  L  C A  AL  GKEIHA+ +R  +A +  + +AL+D+Y KCG
Sbjct: 490 ---LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCG 546

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
              +A   F     ++V++WN++I  +  HG G+  L     MV  G       P+EVTF
Sbjct: 547 QTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGE-----CPDEVTF 601

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +AL  ACS  GMVSEG +LF+ M D Y I P+  HYAC+VDLL R G++ +AY  IN MP
Sbjct: 602 VALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMP 661

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
              D A  W +LL  CRIH++VE+GE+AA+ +  LEP+ A ++VLL ++Y+ A +WDK  
Sbjct: 662 ITPD-AAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLA 720

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VRK M+E G+  + GCSW+E    +H FL  D SH Q  +++  LE + ERM+  G  P
Sbjct: 721 RVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAP 780

Query: 794 DTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
             S   H+  ++  K+ + CGHSE+LA+AFG++NT PGT+I V KN   C  CH+  K I
Sbjct: 781 VES---HSPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMI 837

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGD 880
           S I  R+II+RD ++ HHFK+G+CSCGD
Sbjct: 838 SYIVRRDIIVRDSKQVHHFKDGSCSCGD 865



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 167/580 (28%), Positives = 287/580 (49%), Gaps = 41/580 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    EA+  Y  M  + ++PD + FP VL++  G+ D  +G+++HAHV
Sbjct: 162 SWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV 221

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +++G+    V V N L+ MY KCG D+    KVFD +   D +SWN+MIA     G+ + 
Sbjct: 222 LRFGFA-EEVDVLNALMTMYAKCG-DVVAARKVFDSMAVMDCISWNAMIAGHFENGECNA 279

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            LE F  ML   V+P+  T+ SV +A   LS    +   +++HG +++ G   +    N+
Sbjct: 280 GLELFLTMLQDEVQPNLMTITSVTVASGLLS---DITFAKEMHGLAVKRGFATDVAFCNS 336

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMALRGI 279
           L+ MYA LG +  A+T+F   + RD +SW  ++S   +N   DK LE       M +  +
Sbjct: 337 LIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYAL---MEVNNV 393

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD ++IAS L AC+ L  LD G ++H  A  +   +    V +AL++MY   + ++   
Sbjct: 394 SPDDITIASALAACACLGSLDVGVKLHELA-ESKGFMSYVVVTNALLEMYAKSKRIDKAI 452

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF  + +K +  W++MI G+  N  + EAL  F  M  +A + PN+ T  + + AC  +
Sbjct: 453 EVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--LADVKPNSVTFIAALAACAAT 510

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A    + IH H ++ G+  + Y+ NAL+D+Y + G+   +   F     +D VSWN MI
Sbjct: 511 GALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMI 570

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            G+   G    AL    +M  + E                  P+ +T + +L  C     
Sbjct: 571 AGFVAHGNGETALSFFNQMVKIGE-----------------CPDEVTFVALLCACSRGGM 613

Query: 520 LAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           +++G E+ H+   +  +  ++   + +VD+ ++ G L  A    + MP+  +   W  ++
Sbjct: 614 VSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALL 673

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
               +H    E+ EL    V       E++PN+  +  L 
Sbjct: 674 NGCRIH-RHVELGELAAKYVL------ELEPNDAGYHVLL 706



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 14/326 (4%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   SW   +    ++    +A+  Y  M  +++ PD+    + L A A +  L +G +
Sbjct: 359 TRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK 418

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H      G+ +S V V N L+ MY K    +    +VF  + EKD VSW+SMIA  C  
Sbjct: 419 LHELAESKGF-MSYVVVTNALLEMYAK-SKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFN 476

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            +   AL  FR ML ++V+P+S T ++   AC+       LR G+++H + LR G  +  
Sbjct: 477 HRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGA---LRSGKEIHAHVLRCGIAYEG 532

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           ++ NAL+ +Y K G+   A   F +   +D+VSWN +++    +     A+ F  QM   
Sbjct: 533 YLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKI 592

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G  PD V+  ++L ACS   M+  G E+         ++ N    + +VD+     ++  
Sbjct: 593 GECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLT- 651

Query: 338 GRRVFDFISDKKI----ALWNAMITG 359
               ++FI++  I    A+W A++ G
Sbjct: 652 --EAYNFINEMPITPDAAVWGALLNG 675


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/841 (32%), Positives = 468/841 (55%), Gaps = 32/841 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +   +  E I  Y  M    +  +  +   V+ +   ++D SLG+QI   V
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S + V N+L++M G  G+  +  Y +FD+++E+D +SWNS+ A   + G  + 
Sbjct: 187 VKSGLE-SKLAVENSLISMLGSMGNVDYANY-IFDQMSERDTISWNSIAAAYAQNGHIEE 244

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +   F +M   + E +S T   V+   S L   D  + GR +HG  +++G +    + N 
Sbjct: 245 SFRIFSLMRRFHDEVNSTT---VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYA  GR  +A  +FK    +DL+SWN++++S   + + L+A+  L  M   G   +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  S L AC   +  + G+ +H   + +  L  N  +G+ALV MY    E+   RRV 
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSG-LFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  WNA+I GY ++E  ++AL  F  M  V G+  N  T+ SV+ AC+     
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDL 479

Query: 403 PDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            ++ + +H + +  G   D +V+N+L+ MY++ G +  S+ +F+ ++ R+ ++WN M+  
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   + L L+ +M        R+    LD+          +    L     L+ L 
Sbjct: 540 NAHHGHGEEVLKLVSKM--------RSFGVSLDQ---------FSFSEGLSAAAKLAVLE 582

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+++H  A++     D  + +A  DMY+KCG +    ++      R++ +WN++I A G
Sbjct: 583 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 642

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG  +EV      M+  G     +KP  VTF++L  ACSH G+V +G+  +  +  D+G
Sbjct: 643 RHGYFEEVCATFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 697

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           +EP+ +H  CV+DLLGR+G++ +A   I+ MP + +    W SLL +C+IH N++ G  A
Sbjct: 698 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASCKIHGNLDRGRKA 756

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+NL  LEP+  S YVL SN++++   W+   +VRK+M    ++K+  CSW++  D++  
Sbjct: 757 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 816

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD +H Q+ +++  LE++ + +++ GYV DTS  L + +EE+KE  L  HSE+LA+A
Sbjct: 817 FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 876

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           + +++TP G+T+R+ KNLR+C+DCH   KF+S++  R I+LRD  RFHHF+ G CSC DY
Sbjct: 877 YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDY 936

Query: 882 W 882
           W
Sbjct: 937 W 937



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 330/706 (46%), Gaps = 50/706 (7%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL-SLGK 97
            R + SW   +    R   + E +  + +M    I+P +F   +++ A      +   G 
Sbjct: 20  VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 79

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H  V K G  LS V V+  ++++YG  G       KVF+ + +++ VSW S++     
Sbjct: 80  QVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCS-RKVFEEMPDRNVVSWTSLMVGYSD 137

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G+ +  ++ ++ M    V  +  ++  V  +C  L       LGRQ+ G  ++ G E  
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES---LGRQIIGQVVKSGLESK 194

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N+L++M   +G VD A  +F    +RD +SWN+I ++ +QN    E+      M  
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNC-RE 334
              + +  +++++L    H++    G+ IH   ++  +  D+   V + L+ MY    R 
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDSVVCVCNTLLRMYAGAGRS 312

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           VE    VF  +  K +  WN+++  +  +    +AL L   M   +G   N  T +S + 
Sbjct: 313 VE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALA 370

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC   + F     +HG  +  GL  ++ + NAL+ MY ++G +  S+ +   M  RD V+
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 430

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I GY    +  D    L   Q M  E                  N IT+++VL  C
Sbjct: 431 WNALIGGYA---EDEDPDKALAAFQTMRVEG--------------VSSNYITVVSVLSAC 473

Query: 515 ---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
              G L  L +GK +HAY +     +D  V ++L+ MYAKCG L+ ++ +F+ +  RN+I
Sbjct: 474 LLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN ++ A   HG G+EVL+L+  M + G     V  ++ +F    +A +   ++ EG  
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFG-----VSLDQFSFSEGLSAAAKLAVLEEGQQ 586

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA-GAWSSLLGACR 690
           L + +    G E     +    D+  + G++    +++ M+PP  +++  +W+ L+ A  
Sbjct: 587 L-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISALG 642

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY---SSAQLWDKAM 733
            H   E  E+ A    +LE  +   +V   ++    S   L DK +
Sbjct: 643 RHGYFE--EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 686



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 265/568 (46%), Gaps = 41/568 (7%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD +  +++VSWN+M++ + R G +   +E FR M    ++PSSF + S+  AC     
Sbjct: 14  LFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG---- 69

Query: 196 RDG--LRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           R G   R G QVHG   + G   + ++  A++ +Y   G V  ++ +F+   DR++VSW 
Sbjct: 70  RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++   S   +  E +   + M   G+  +  S++ V+ +C  L+    G++I    +++
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L     V ++L+ M  +   V+    +FD +S++    WN++   Y QN + EE+  +
Sbjct: 190 G-LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248

Query: 373 FIKM----EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           F  M    +EV     N+TT+S+++      +      GIHG  +K+G      V N L+
Sbjct: 249 FSLMRRFHDEV-----NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MY+  GR   +  +F  M  +D +SWN+++  +   G+  DAL LL  M +  +     
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK----- 358

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                         N +T  + L  C       KG+ +H   + + L  + ++G+ALV M
Sbjct: 359 ------------SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y K G ++ +RRV   MP R+V+ WN +I  Y    +  + L   + M  EG     V  
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-----VSS 461

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N +T +++ +AC   G + E     +      G E        ++ +  + G +  +  L
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVE 696
            N +         W+++L A   H + E
Sbjct: 522 FNGLDNR--NIITWNAMLAANAHHGHGE 547



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 246/506 (48%), Gaps = 34/506 (6%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY K GRV  A+ LF     R+ VSWNT++S + +   +LE + F R+M   GIKP    
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 286 IASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           IAS++ AC     M   G ++H +  ++ +L D  +V +A++ +Y     V C R+VF+ 
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--VRSEAF 402
           + D+ +  W +++ GY      EE + ++  M    G+  N  +MS V+ +C  ++ E+ 
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG-EGVGCNENSMSLVISSCGLLKDESL 178

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
             +  I G  +K GL     V+N+L+ M   MG ++ +  IFD M  RDT+SWN++   Y
Sbjct: 179 GRQ--IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G   ++  +   M+   +E                  NS T+ T+L   G +     
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDE-----------------VNSTTVSTLLSVLGHVDHQKW 279

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ IH   ++    + V V + L+ MYA  G    A  VF  MP +++I+WN ++ ++  
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            G   + L LL +M++ G        N VTF +  AAC       +G  + + +    G+
Sbjct: 340 DGRSLDALGLLCSMISSGK-----SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL 393

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             +      +V + G+ G++ ++ +++  MP       AW++L+G     ++ +    A 
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNALIGGYAEDEDPDKALAAF 451

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQL 728
           Q + +    V+S+Y+ + ++ S+  L
Sbjct: 452 QTMRV--EGVSSNYITVVSVLSACLL 475


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 278/773 (35%), Positives = 429/773 (55%), Gaps = 32/773 (4%)

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
           +G   + + N +++M  + G + W  +KVF ++ E+D  SWN M+    + G  + AL+ 
Sbjct: 124 HGTFGLRLGNAMLSMLVRFG-ETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDL 182

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           +  ML++   P  +T   V  +C  +     L +GR+VH + LR G      ++NAL+ M
Sbjct: 183 YHRMLWAGARPDVYTFPCVLRSCGGVPD---LTMGREVHAHVLRFGLGVEVDVLNALVTM 239

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK G V+ A+ +F      D +SWN +++   +N +    +     M    ++P+ ++I
Sbjct: 240 YAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTI 299

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            SV  A   L  LD  KEIHA A++     D +F  S L+ MY +   +     VF  + 
Sbjct: 300 TSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNS-LIQMYSSLGRMGEACTVFSRME 358

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            +    W AMI+GY +N + ++AL ++  ME V  + P+  T++S + AC          
Sbjct: 359 TRDAMSWTAMISGYEKNGFPDKALEVYALME-VNNVSPDDVTVASALAACASLGRLDVGI 417

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H  A   G  R   V NAL++MY++   IE +  +F  M  +D +SW++MI G+  C 
Sbjct: 418 KLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGF--CF 475

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
            H                KN   +Y     +   KPNS+T +  L  C A  +L  GKEI
Sbjct: 476 NH----------------KNFEALYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEI 519

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           HA+ +R  +A++  V +AL+D+Y KCG   +A   F     ++V++WN+++  +  HG G
Sbjct: 520 HAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHG 579

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
              L     M+  G       P+EVTF+AL   CS +GMVS+G +LF+ M + Y I P+ 
Sbjct: 580 DIALSFFNEMLETGEH-----PDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNL 634

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
            HYAC+VDLL R G++ + Y  IN MP   D A  W +LL  CRIH+N+E+GE+AA+ + 
Sbjct: 635 KHYACMVDLLSRVGRLTEGYNFINRMPITPD-AAVWGALLNGCRIHRNIELGELAAKIVL 693

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEP+ A ++VLLS++Y+ A +W +   VRK M+  G+  + GCSW+E    IH FL  D
Sbjct: 694 ELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDD 753

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH Q ++++  L+ + ERM+  G+ P  S  L +  E  K+ +LCGHSE+LA+AFG++N
Sbjct: 754 ESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-KEVSKDDVLCGHSERLAVAFGLIN 812

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           T PGT+I V KN   C  CH   + ISKI  REI +RD + FHHF++G+CSCG
Sbjct: 813 TTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCSCG 865


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/638 (40%), Positives = 382/638 (59%), Gaps = 31/638 (4%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +S N ++ SL +  K  +A+  L Q +     P   +   ++  C H   L     +H +
Sbjct: 47  ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            L N    D  F+ + L+ MY +   V+  R+VFD    + I +WNA+        + EE
Sbjct: 103 ILDNGSDQD-PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDRYVQ 424
            L L+ KM  + G+  +  T + V+ ACV SE   +     + IH H  + G     Y+ 
Sbjct: 162 VLGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
             L+DMY+R G ++ +  +F  M VR+ VSW+ MI  Y   G+  +AL   REM  M E 
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM--MRET 278

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
           K+ +             PNS+T+++VL  C +L+AL +GK IH Y +R  L + + V SA
Sbjct: 279 KDSS-------------PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LV MY +CG L   +RVFD M  R+V++WN +I +YG+HG G++ +++ + M+A G+   
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA--- 382

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
              P  VTF+++  ACSH G+V EG  LF  M  D+GI+P  +HYAC+VDLLGRA ++++
Sbjct: 383 --SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A +++  M  E      W SLLG+CRIH NVE+ E A++ LF LEP  A +YVLL++IY+
Sbjct: 441 AAKMVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
            AQ+WD+   V+K ++  G++K PG  W+E   +++ F++ D  +   EQ+H FL  L+E
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
            M+++GY+P T  VL+ +  EEKE ++ GHSEKLA+AFG++NT  G  IR+ KNLR+C D
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCED 619

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH  TKFISK   +EI++RDV RFH FKNG CSCGDYW
Sbjct: 620 CHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 203/448 (45%), Gaps = 33/448 (7%)

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGR 203
           ++S N +I +LC+ GK   A+     +L     PS  T   + L C + S   D LR+ R
Sbjct: 46  KISNNQLIQSLCKEGKLKQAIR----VLSQESSPSQQTYELLILCCGHRSSLSDALRVHR 101

Query: 204 QVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
            +  N     + + F+   L+ MY+ LG VD A+ +F     R +  WN +  +L+    
Sbjct: 102 HILDNG---SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE----MLDTGKEIHAYALRNDILIDNS 319
             E +    +M   G++ D  +   VL AC   E     L  GKEIHA+  R      + 
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG-YSSHV 217

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK-MEE 378
           ++ + LVDMY     V+    VF  +  + +  W+AMI  Y +N    EAL  F + M E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
                PN+ TM SV+ AC    A    + IHG+ ++ GL     V +AL+ MY R G++E
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           + + +FD M  RD VSWN++I+ Y + G    A+ +  EM                    
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-----------------LAN 380

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLN- 556
              P  +T ++VL  C     + +GK +     R+  +   +   + +VD+  +   L+ 
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHG 584
            A+ V D+        W  ++ +  +HG
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 231/499 (46%), Gaps = 42/499 (8%)

Query: 8   LTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE 67
           +  LP  PL       P  + A + P   S    K S  + ++S  +  + ++AI     
Sbjct: 17  VNFLPRSPLKP-----PSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAI----R 67

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           +   +  P    +  ++        LS   ++H H++  G       +A  L+ MY   G
Sbjct: 68  VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPF-LATKLIGMYSDLG 126

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
           S  +   KVFD+  ++    WN++   L   G  +  L  +  M    VE   FT   V 
Sbjct: 127 SVDY-ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185

Query: 188 LAC-SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
            AC ++    + L  G+++H +  R G   + +IM  L+ MYA+ G VD A  +F     
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK---PDGVSIASVLPACSHLEMLDTG 302
           R++VSW+ +++  ++N K  EA+   R+M +R  K   P+ V++ SVL AC+ L  L+ G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREM-MRETKDSSPNSVTMVSVLQACASLAALEQG 304

Query: 303 KEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           K IH Y LR    +D+   V SALV MY  C ++E G+RVFD + D+ +  WN++I+ YG
Sbjct: 305 KLIHGYILRRG--LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI--HGHAIKLGLGR 419
            + Y ++A+ +F +M    G  P   T  SV+ AC         EG+   G  +   + R
Sbjct: 363 VHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGAC-------SHEGLVEEGKRLFETMWR 414

Query: 420 DRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDAL 472
           D  ++        ++D+  R  R++ +  +  DM        W +++     C  HG+  
Sbjct: 415 DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS---CRIHGNVE 471

Query: 473 MLLREMQNM--EEEKNRNN 489
           +  R  + +   E KN  N
Sbjct: 472 LAERASRRLFALEPKNAGN 490


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/842 (32%), Positives = 458/842 (54%), Gaps = 47/842 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +     EA+  +  M  S   P+ F     L++ + +++ + G +  A V
Sbjct: 83  SWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALV 142

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  S+  + + L++ Y KCG    + Y+VF+ +   D VSW  M+++    G W  
Sbjct: 143 TKSGFD-SNPVLGSALIDFYSKCGCTQ-EAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMN 221
           AL+ +  M+ + V P+ FT V +  A S L    GL  G+ VH + +  R+ E N  +  
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFL----GLNYGKLVHAHLMMWRI-ELNLVLKT 255

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K   ++DA  + K   + D+  W  I+S  +Q+ KF EA+    +M   G+ P
Sbjct: 256 ALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVP 315

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE-VECGRR 340
           +  + + +L ACS +  LD GK+IH+  +   +  D S VG++LVDMY  C   +E   R
Sbjct: 316 NNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVS-VGNSLVDMYMKCSNMIEDAVR 374

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            F  I+   +  W ++I G+ ++  +EE++ +F  M+ V G+ PN+ T+S+++ AC   +
Sbjct: 375 AFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGV-GVRPNSFTLSTILGACGTIK 433

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +      +HG+ IK     D  V NAL+D Y+ +G ++ +  +   M+ RD +++ ++ T
Sbjct: 434 SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLAT 493

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G H  AL ++  M       N+++V          + +  +L + L     +  +
Sbjct: 494 RINQTGNHEMALNIITHM-------NKDDV----------RMDGFSLASFLSAAAGIPIM 536

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             GK++H Y++++ L + + V + LVD+Y KCGC++ A R F  +   + ++WN +I   
Sbjct: 537 ETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGL 596

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             +G     L   ++M   G     V+P+++T + +  ACSH G+V  G+D F  M++ +
Sbjct: 597 ASNGHVSSALSAFEDMRLAG-----VEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKH 651

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GI P  DHY C+VDLLGRAG++E+A  +I  MP + D A  + +LLGAC++H N+ +GE 
Sbjct: 652 GIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPD-ALIYKTLLGACKLHGNIPLGEH 710

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            A+    L+P   + YVLL+N+Y  +   +     R+ M+E GVRK PG SW+E  + +H
Sbjct: 711 MARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVH 770

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F AGD SH Q  ++H  +E+L  + R +G       + +  N       L  HSEKLA+
Sbjct: 771 LFTAGDTSHPQIGKIHEKIESLIAQFRNQG-------IWYQENRA-----LAHHSEKLAV 818

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG+++TPP   IR+ KN+R+C DCH     ++++  REII+RD  RFH FK G CSC  
Sbjct: 819 AFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRG 878

Query: 881 YW 882
           YW
Sbjct: 879 YW 880



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 184/659 (27%), Positives = 327/659 (49%), Gaps = 43/659 (6%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  IH+ ++K G+    + ++N L+++YGKC   + +  ++FD +  +D  SW  +++  
Sbjct: 34  GICIHSPIIKMGFQ-EDMFLSNNLLSLYGKCFG-VAEARQLFDEMPCRDVASWTMLMSAY 91

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGE 214
            + G  + ALE F  ML S   P+ FTL +   +CS L   + G R    V  +     +
Sbjct: 92  GKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGF---D 148

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N  + +AL+  Y+K G   +A  +F+   + D+VSW  +VSS  +   + +A+    +M
Sbjct: 149 SNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM 208

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G+ P+  +   +L A S L  L+ GK +HA+ +   I + N  + +ALVDMYC C+ 
Sbjct: 209 IQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIEL-NLVLKTALVDMYCKCQS 266

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E   +V     +  + LW A+I+G+ Q+    EA+  F +M E +G+ PN  T S ++ 
Sbjct: 267 IEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEM-ETSGVVPNNFTYSGILN 325

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR-IEISKTIFDDMEVRDTV 453
           AC    A    + IH   +  GL  D  V N+L+DMY +    IE +   F  +   + +
Sbjct: 326 ACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVI 385

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SW ++I G++  G   +++ +   MQ                  +  +PNS TL T+L  
Sbjct: 386 SWTSLIAGFSEHGLEEESIKVFGAMQG-----------------VGVRPNSFTLSTILGA 428

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           CG + +L + +++H Y I+N    DVVVG+ALVD YA  G ++ A  V  +M  R+VIT+
Sbjct: 429 CGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITY 488

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
             +       G  +  L ++ +M  +     +V+ +  +  +  +A +   ++  G  L 
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKD-----DVRMDGFSLASFLSAAAGIPIMETGKQLH 543

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ-LINMMPPEFDKAGAWSSLLGACRI 691
            Y +K   G   S  +   +VDL G+ G + DA++  + +  P+   A +W+ L+     
Sbjct: 544 CYSVKSGLGSWISVSN--GLVDLYGKCGCIHDAHRSFLEITEPD---AVSWNGLIFGLAS 598

Query: 692 HQNVEIGEIAAQNLFL--LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM-GVRKE 747
           + +V     A +++ L  +EPD  +  ++L    S   L D  +D  + M+E  G+R +
Sbjct: 599 NGHVSSALSAFEDMRLAGVEPDQITCLLVLYAC-SHGGLVDMGLDYFQSMREKHGIRPQ 656



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 229/491 (46%), Gaps = 44/491 (8%)

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C++ S RDG+     +H   +++G + + F+ N L+++Y K   V +A+ LF     RD+
Sbjct: 26  CNSRSVRDGI----CIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDV 81

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
            SW  ++S+  +     EA+     M + G  P+  ++++ L +CS L   + G    A 
Sbjct: 82  ASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQAL 141

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
             ++     N  +GSAL+D Y  C   +   RVF+++++  I  W  M++ + +     +
Sbjct: 142 VTKSG-FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNA 426
           AL L+ +M +  G+ PN  T   ++ A   S       G  +H H +   +  +  ++ A
Sbjct: 201 ALQLYHRMIQ-TGVAPNEFTFVKLLAA---SSFLGLNYGKLVHAHLMMWRIELNLVLKTA 256

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMY +   IE +  +       D   W  +I+G+T   +  +A+    EM+       
Sbjct: 257 LVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET------ 310

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                     V+   PN+ T   +L  C ++ AL  GK+IH+  +   L  DV VG++LV
Sbjct: 311 --------SGVV---PNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLV 359

Query: 547 DMYAKCG-CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           DMY KC   +  A R F  +   NVI+W  +I  +  HG  +E +++   M     +G  
Sbjct: 360 DMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM-----QGVG 414

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV----VDLLGRAGK 661
           V+PN  T   +  AC     +++   L       Y I+ + D+   V    VD     G 
Sbjct: 415 VRPNSFTLSTILGACGTIKSLTQTRKL-----HGYIIKNNADNDVVVGNALVDAYAGLGM 469

Query: 662 VEDAYQLINMM 672
           V+DA+ + +MM
Sbjct: 470 VDDAWHVTSMM 480



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 27/300 (9%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           + +  +V  C  S +  D   IH   IK+G   D ++ N L+ +Y +   +  ++ +FD+
Sbjct: 17  SLLKDIVSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDE 75

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  RD  SW  +++ Y   G H +AL L   M                  +    PN  T
Sbjct: 76  MPCRDVASWTMLMSAYGKIGNHEEALELFDSM-----------------LISGEYPNEFT 118

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L T L  C AL     G    A   ++   ++ V+GSAL+D Y+KCGC   A RVF+ M 
Sbjct: 119 LSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMN 178

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
             ++++W +++ ++   G   + L+L   M+  G     V PNE TF+ L AA S  G+ 
Sbjct: 179 NGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTG-----VAPNEFTFVKLLAASSFLGLN 233

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
              +   + M   + IE +      +VD+  +   +EDA + ++ +  E+D    W++++
Sbjct: 234 YGKLVHAHLMM--WRIELNLVLKTALVDMYCKCQSIEDAVK-VSKLTLEYD-VFLWTAII 289



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 33/291 (11%)

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH+  I+     D+ + + L+ +Y KC  +  AR++FD MP R+V +W +++ AYG  G 
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E LEL  +M+  G       PNE T      +CS     + G   F  +    G + +
Sbjct: 97  HEEALELFDSMLISGEY-----PNEFTLSTALRSCSALREFNHGTR-FQALVTKSGFDSN 150

Query: 646 PDHYACVVDLLGRAGKVEDAYQLI-----------NMMPPEFDKAGAWSSLLGACRIHQN 694
           P   + ++D   + G  ++AY++             MM   F +AG+WS  L     H+ 
Sbjct: 151 PVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQL--YHRM 208

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSN---IYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           ++ G +A      ++   AS ++ L+    +++   +W   +++   +K   V     C 
Sbjct: 209 IQTG-VAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMW--RIELNLVLKTALVDMYCKCQ 265

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER--------MRKEGYVPD 794
            IE   ++ K          +  + GF ++L  R        M   G VP+
Sbjct: 266 SIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPN 316


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/640 (40%), Positives = 381/640 (59%), Gaps = 50/640 (7%)

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
           L    ++R++    I+ D   I SVL ACS + +   GKEIH ++++N  L+ + FV +A
Sbjct: 94  LNTYTYMRKL---DIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNG-LVSDVFVVNA 149

Query: 325 LVDMYCNCREVECGRRVFDFISDK----------------------KIALWNAMITGYGQ 362
           L+ MY  C  +   R +FD +S++                       I  W AMI GY +
Sbjct: 150 LMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIR 209

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
               EE   LF++M E   ++PN  TM S++ +C    A    + +H + ++ G G    
Sbjct: 210 CNDLEEGERLFVRMIE-ENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           +  AL+DMY + G I  ++ IFD M+ +D ++W  MI+ Y        A  L  +M++  
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD-- 326

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                N V          +PN +T++++L  C    AL  GK  HAY  +  +  DV++ 
Sbjct: 327 -----NGV----------RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILK 371

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL+DMYAKCG ++ A+R+F     R++ TWNV++  YGMHG G++ L+L   M   G  
Sbjct: 372 TALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLG-- 429

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              VKPN++TFI    ACSH+G+V EG  LF KM  D+G+ P  +HY C+VDLLGRAG +
Sbjct: 430 ---VKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLL 486

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++AY++I  MP   + A  W ++L AC+IH+N  +GE+AA+ L  LEP    + VL+SNI
Sbjct: 487 DEAYKMIESMPVTPNIA-IWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNI 545

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y++A  W+    +RK +K+ G++KEPG S IE    +H F  GD +H   E++   L  +
Sbjct: 546 YAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEM 605

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           S+++++ GY+PDTS VLHN++EEEKET L  HSEKLA+AFG+++T PGT IRV KNLR+C
Sbjct: 606 SKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRIC 665

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +DCH  TK +SKI  R II+RD  RFHHF+ G+CSCG YW
Sbjct: 666 DDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 242/504 (48%), Gaps = 38/504 (7%)

Query: 12  PSPPLSSLQTHQPPATTATSLPLPGSQ------TRCKESWIESLRSEARSNQFREAILSY 65
           PSP   +     P  T    L L  +Q      TR   +  + +      +  R A+ +Y
Sbjct: 38  PSPQHQNKHQKHPSFTPNNHLCLDQTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTY 97

Query: 66  IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK 125
             M + DI+ D+F  P+VLKA + I    +GK+IH   VK G  +S V V N L+ MY +
Sbjct: 98  TYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGL-VSDVFVVNALMQMYSE 156

Query: 126 CGSDMWDVYKVFDRITEKDQVSWNSMI----------------------ATLCRFGKWDL 163
           CGS +     +FD+++E+D VSW++MI                      A   R    + 
Sbjct: 157 CGS-LVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEE 215

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
               F  M+  NV P+  T++S+ ++C  +     ++LG+++H   LR G   +  +  A
Sbjct: 216 GERLFVRMIEENVFPNDITMLSLIISCGFVG---AVQLGKRLHAYILRNGFGMSLALATA 272

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G +  A+ +F S +++D+++W  ++S+ +Q +    A     QM   G++P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +++ S+L  C+    LD GK  HAY  +  + +D   + +AL+DMY  C ++   +R+F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD-VILKTALIDMYAKCGDISGAQRLF 391

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
               D+ I  WN M+ GYG + Y E+AL LF +ME + G+ PN  T    + AC  +   
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETL-GVKPNDITFIGALHACSHAGLV 450

Query: 403 PDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
            + +G+    I   GL         ++D+  R G ++ +  + + M V   ++ W  M+ 
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510

Query: 461 GYTICGQHGDALMLLREMQNMEEE 484
              I        +  RE+  +E +
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQ 534


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/767 (35%), Positives = 429/767 (55%), Gaps = 34/767 (4%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + N +++M  + G ++W  ++VF ++ E+D  SWN M+    + G  + AL+ +  ML++
Sbjct: 133 LGNAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRV 233
            + P  +T   V   C  +      R+GR+VH + LR G  +   ++NAL+ MYAK G +
Sbjct: 192 GMRPDVYTFPCVLRTCGGIP---DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F      D +SWN +++   +N +    +     M    ++P+ ++I SV  A 
Sbjct: 249 VAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L  +   KE+H +A++    ID +F  S L+ MY +   +    ++F  +  K    W
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNS-LIQMYTSLGRMGDAGKIFSRMETKDAMSW 367

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            AMI+GY +N + ++AL ++  ME +  + P+  T++S + AC           +H  A 
Sbjct: 368 TAMISGYEKNGFPDKALEVYALME-LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
             G  R   V NAL++MY++   I+ +  +F  M  +D VSW++MI G+    +  +AL 
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALY 486

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
             R M                      KPNS+T +  L  C A  AL  GKEIHAY +R 
Sbjct: 487 YFRYMLG------------------HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            + ++  V +AL+D+Y KCG  ++A   F +   ++V++WN+++  +  HG G   L L 
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             MV  G       P+EVTF+AL  ACS +GMV +G +LF+ M + + I P+  HYAC+V
Sbjct: 589 NQMVEMGEH-----PDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMV 643

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLL R GK+ +AY LIN MP + D A  W +LL  CRIH++VE+GE+AA+ +  LEP+  
Sbjct: 644 DLLSRVGKLTEAYNLINRMPIKPD-AAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
           +++VLL ++Y+ A  W +   VRK M+E G+ ++ GCSW+E     H FL  D SH Q +
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIK 762

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           +++  L  + ERM+  G+ P  S     V+E++   +LCGHSE+LA+AFG++NT PGTTI
Sbjct: 763 EINVVLHGIYERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLINTTPGTTI 819

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            V KN   C  CH   K IS+I  REI +RD ++ H FK+G CSCGD
Sbjct: 820 SVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 866


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 281/767 (36%), Positives = 421/767 (54%), Gaps = 60/767 (7%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           +N +I      G  D A+  +  ML   + P  +T   +  ACS +     L  G QVHG
Sbjct: 98  YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKIL---ALSEGVQVHG 154

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             L++G E + F+ N+L+  YA+ G+VD  + LF    +R++VSW ++++  S  D   E
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKE 214

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           AV    QM   G++P+ V++  V+ AC+ L+ L+ GK++ +Y     + +    V +ALV
Sbjct: 215 AVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV-NALV 273

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           DMY  C ++   R++FD  ++K + ++N +++ Y  +E+  + L++  +M +  G  P+ 
Sbjct: 274 DMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQ-KGPRPDK 332

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR---------- 436
            TM S + AC +       +  H + ++ GL     + NA++DMY + G+          
Sbjct: 333 VTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEH 392

Query: 437 ---------------------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
                                +E++  IFD+M  RD VSWNTMI          +A+ L 
Sbjct: 393 MPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELF 452

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           REMQN     +R                 +T++ +   CG L AL   K +  Y  +N +
Sbjct: 453 REMQNQGIPGDR-----------------VTMVGIASACGYLGALDLAKWVCTYIEKNDI 495

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             D+ +G+ALVDM+++CG  + A  VF  M  R+V  W   I    M G  +  +EL   
Sbjct: 496 HVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNE 555

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M+ +     +VKP++V F+AL  ACSH G V +G  LF+ M+  +GI P   HY C+VDL
Sbjct: 556 MLEQ-----KVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDL 610

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG +E+A  LI  MP E +    W SLL ACR H+NVE+   AA+ L  L P+    
Sbjct: 611 LGRAGLLEEAVDLIQSMPIEPNDV-VWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGI 669

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           +VLLSNIY+SA  W     VR +MKE GV+K PG S IE    IH+F +GD SH ++  +
Sbjct: 670 HVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHI 729

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
              LE ++ R+ + GYVPDT+ VL +V+E+EKE LL  HSEKLA+A+G++ T  G  IRV
Sbjct: 730 GLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRV 789

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLR+C+DCH   K +SK+ +REI +RD  R+H FK G CSC DYW
Sbjct: 790 VKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 167/578 (28%), Positives = 278/578 (48%), Gaps = 76/578 (13%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A +    +AIL Y++M    I PD + FP +L A + I  LS G Q+H  V+K G 
Sbjct: 102 IRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGL 161

Query: 109 GLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
               + V+N+L++ Y +CG  D+    K+FD + E++ VSW S+I     +   DL+ EA
Sbjct: 162 E-GDIFVSNSLIHFYAECGKVDLG--RKLFDGMLERNVVSWTSLING---YSGRDLSKEA 215

Query: 168 ---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              F  M  + VEP+  T+V V  AC+ L     L LG++V      +G E +T ++NAL
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLK---DLELGKKVCSYISELGMELSTIMVNAL 272

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G +  A+ +F    +++LV +NTI+S+   ++   + ++ L +M  +G +PD 
Sbjct: 273 VDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDK 332

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDIL-IDNSFVGSALVDMYCNCREVECGRRVF 342
           V++ S + AC+ L  L  GK  HAY LRN +   DN  + +A++DMY  C + E   +VF
Sbjct: 333 VTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDN--ISNAIIDMYMKCGKREAACKVF 390

Query: 343 DFISDKKIALWNAMITGYGQN--------------EYD-----------------EEALM 371
           + + +K +  WN++I G  ++              E D                 EEA+ 
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIE 450

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M+   G+  +  TM  +  AC    A    + +  +  K  +  D  +  AL+DM+
Sbjct: 451 LFREMQN-QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           SR G    +  +F  ME RD  +W   I    + G    A+ L  EM             
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEM------------- 556

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALV 546
            L++ V   KP+ +  + +L  C    ++ +G+++      A+ IR      +V    +V
Sbjct: 557 -LEQKV---KPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIR----PHIVHYGCMV 608

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           D+  + G L  A  +   MP+  N + W  ++ A   H
Sbjct: 609 DLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKH 646



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 269/600 (44%), Gaps = 90/600 (15%)

Query: 178 PSSFTLVSVALACSNLSRRDG----------LRLGRQVHGNSLRVG---EWNTFIMNALM 224
           PSS  LV  +L  +N   R+           L+  +Q+H + ++ G         +N L+
Sbjct: 7   PSSTLLVPASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLI 66

Query: 225 AMYAKLGRVDDAKTLFKSFEDRD-----LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           A   ++G ++       +F D D     L  +N ++   +      +A++   QM + GI
Sbjct: 67  ASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGI 126

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD  +   +L ACS +  L  G ++H   L+  +  D  FV ++L+  Y  C +V+ GR
Sbjct: 127 VPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGD-IFVSNSLIHFYAECGKVDLGR 185

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           ++FD + ++ +  W ++I GY   +  +EA+ LF +M E AG+ PN  TM  V+ AC + 
Sbjct: 186 KLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGE-AGVEPNPVTMVCVISACAKL 244

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           +     + +  +  +LG+     + NAL+DMY + G I  ++ IFD+   ++ V +NT++
Sbjct: 245 KDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIM 304

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           + Y       D L++L EM                     P+P+ +T+++ +  C  L  
Sbjct: 305 SNYVHHEWASDVLVILDEMLQK-----------------GPRPDKVTMLSTIAACAQLGD 347

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L+ GK  HAY +RN L     + +A++DMY KCG    A +VF+ MP + V+TWN +I  
Sbjct: 348 LSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAG 407

Query: 580 YGMHGEG-------------------------------QEVLELLKNMVAEGSRGGEVKP 608
               G+                                +E +EL + M  +G  G     
Sbjct: 408 LVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPG----- 462

Query: 609 NEVTFIALFAACSHSGMVSEGMDL-----FYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
           + VT + + +AC + G     +DL      Y  K+D  ++        +VD+  R G   
Sbjct: 463 DRVTMVGIASACGYLG----ALDLAKWVCTYIEKNDIHVDLQLG--TALVDMFSRCGDPS 516

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL---LEPDVASHYVLLS 720
            A  +   M  E     AW++ +G   +  N E G I   N  L   ++PD      LL+
Sbjct: 517 SAMHVFKRM--EKRDVSAWTAAIGVMAMEGNTE-GAIELFNEMLEQKVKPDDVVFVALLT 573



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 210/469 (44%), Gaps = 64/469 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +  +  +EA+  + +M  + ++P+      V+ A A ++DL LGK++ +++
Sbjct: 198 SWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYI 257

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G  LS++ V N LV+MY KCG D+    ++FD    K+ V +N++++          
Sbjct: 258 SELGMELSTIMV-NALVDMYMKCG-DICAARQIFDECANKNLVMYNTIMSNYVHHEWASD 315

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
            L     ML     P   T++S   AC+ L     L +G+  H   LR G   W+  I N
Sbjct: 316 VLVILDEMLQKGPRPDKVTMLSTIAACAQLG---DLSVGKSSHAYVLRNGLEGWDN-ISN 371

Query: 222 ALMAMYAKLGRVDDA---------KT----------------------LFKSFEDRDLVS 250
           A++ MY K G+ + A         KT                      +F    +RDLVS
Sbjct: 372 AIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVS 431

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WNT++ +L Q   F EA+   R+M  +GI  D V++  +  AC +L  LD  K +  Y  
Sbjct: 432 WNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIE 491

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +NDI +D    G+ALVDM+  C +      VF  +  + ++ W A I         E A+
Sbjct: 492 KNDIHVDLQL-GTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAI 550

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHG---HAIKLGLGRD 420
            LF +M E   + P+     +++ AC          + F   E  HG   H +  G    
Sbjct: 551 ELFNEMLE-QKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYG---- 605

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQH 468
                 ++D+  R G +E +  +   M +  + V W +++     C +H
Sbjct: 606 -----CMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA---CRKH 646


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/720 (38%), Positives = 398/720 (55%), Gaps = 65/720 (9%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD---AKTLFKSFEDR--DLVSWNTIVSS 257
           +Q+H   ++ G  NT    + +  +  L    D   A +LF S   +  ++  WNT++ +
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            S       ++    QM   G+ P+  +  S+  +C+  +     K++HA+AL+  + + 
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL- 160

Query: 318 NSFVGSALVDMYCNCRE-------------------------------VECGRRVFDFIS 346
           +  V ++L+ MY    E                               V+  RR+FD I 
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  WNAMI GY Q+   EEAL  F +M+E A + PN +TM SV+ AC    +    +
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQE-ADVSPNQSTMVSVLSACGHLRSLELGK 279

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            I       G G++  + NAL+DMYS+ G I  ++ +FD ME +D + WNTMI GY    
Sbjct: 280 WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLS 339

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
            + +AL+L   M        R NV           PN +T + VLP C +L AL  GK +
Sbjct: 340 LYEEALVLFEVML-------RENV----------TPNDVTFLAVLPACASLGALDLGKWV 382

Query: 527 HAYAIRNMLAT----DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           HAY  +N+  T    +V + ++++ MYAKCGC+  A +VF  M  R++ +WN +I    M
Sbjct: 383 HAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +G  +  L L + M+ EG      +P+++TF+ + +AC+ +G V  G   F  M  DYGI
Sbjct: 443 NGHAERALGLFEEMINEG-----FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGI 497

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P   HY C++DLL R+GK ++A  L+  M  E D A  W SLL ACRIH  VE GE  A
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGA-IWGSLLNACRIHGQVEFGEYVA 556

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + LF LEP+ +  YVLLSNIY+ A  WD    +R K+ + G++K PGC+ IE    +H+F
Sbjct: 557 ERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEF 616

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD  H QSE +   L+ +   + + G+VPDTS VL++++EE KE  L  HSEKLAIAF
Sbjct: 617 LVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAF 676

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+++T PG+TIR+ KNLRVC +CH ATK ISKI +REII RD  RFHHFK+G CSC D W
Sbjct: 677 GLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 246/531 (46%), Gaps = 76/531 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ + +     ++  + +M  S + P++  FP++ K+ A  +     KQ+HAH +
Sbjct: 95  WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154

Query: 105 KYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVY 134
           K    L    V  +L++MY + G                                + D  
Sbjct: 155 KLALHLHP-HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDAR 213

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD I  KD VSWN+MIA   + G+++ AL  F  M  ++V P+  T+VSV  AC +L 
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273

Query: 195 RRDGLRLGRQVHGNSLRVGEW--------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
               L LG+        +G W        N  ++NAL+ MY+K G +  A+ LF   ED+
Sbjct: 274 ---SLELGKW-------IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D++ WNT++        + EA++    M    + P+ V+  +VLPAC+ L  LD GK +H
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVH 383

Query: 307 AYA---LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           AY    L+    ++N  + ++++ MY  C  VE   +VF  +  + +A WNAMI+G   N
Sbjct: 384 AYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMN 443

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            + E AL LF +M    G  P+  T   V+ AC ++  F +     GH     + +D  +
Sbjct: 444 GHAERALGLFEEMIN-EGFQPDDITFVGVLSACTQA-GFVEL----GHRYFSSMNKDYGI 497

Query: 424 QNAL------MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
              L      +D+ +R G+ + +K +  +ME+  D   W +++    I GQ      +  
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE 557

Query: 477 EMQNMEEEKN-----RNNVYDL-----DETVLRPKPNSITLMTVLPGCGAL 517
            +  +E E +      +N+Y       D   +R K N   +  V PGC ++
Sbjct: 558 RLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKV-PGCTSI 607



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 138/269 (51%), Gaps = 20/269 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +S +F EA+  +  M  +D+ P+     +VL A   ++ L LGK I + V
Sbjct: 226 SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWV 285

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G+G  ++ + N LV+MY KCG ++    K+FD + +KD + WN+MI   C    ++ 
Sbjct: 286 RDRGFG-KNLQLVNALVDMYSKCG-EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEE 343

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----------GNSLRVG 213
           AL  F +ML  NV P+  T ++V  AC++L   D   LG+ VH          GN   V 
Sbjct: 344 ALVLFEVMLRENVTPNDVTFLAVLPACASLGALD---LGKWVHAYIDKNLKGTGNVNNVS 400

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            W + I+     MYAK G V+ A+ +F+S   R L SWN ++S L+ N     A+    +
Sbjct: 401 LWTSIIV-----MYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE 455

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTG 302
           M   G +PD ++   VL AC+    ++ G
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELG 484


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/670 (39%), Positives = 404/670 (60%), Gaps = 28/670 (4%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +  A  LF    + DL +W  ++S  +Q+    +A+     +  R ++PD   + SV 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC+    L   K+IH  A++     D   +G+AL+DM+  C+ V   R VFD +  K +
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKD-LVLGNALIDMFGKCKFVNGARCVFDDMVVKDV 143

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W +M   Y       + ++LF +M  + G+  N+ T+SS++PAC  ++       +HG
Sbjct: 144 VSWTSMTYCYVNCGMCRQGILLFREMG-LNGIRANSLTVSSILPAC--ADYIKLGREVHG 200

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             ++  +  + YV +AL++MY+    ++ ++ +FD M  RD VSWN M+T Y +  ++  
Sbjct: 201 FILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYER 260

Query: 471 ALMLLREMQNMEEEKNR------------NNVYDLDETVLRP------KPNSITLMTVLP 512
            L L  +M+    + N+            N  ++L   +L        KPN IT+++ LP
Sbjct: 261 GLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALP 320

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           GC  L +L  GKEIH Y  R+    DV + +ALV +YAKCG L  +R VF+ MP ++V+ 
Sbjct: 321 GCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVA 380

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +IMA  MHG+G E L L   M+  G     V+PN VTFI + + CSHS +  EG+ +
Sbjct: 381 WNTMIMANSMHGKGGESLILFNKMLDSG-----VEPNSVTFIGVLSGCSHSQLADEGLLV 435

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M  ++ I P  DHY+C+VD+L RAG++E+AY  I  MP E   A AW +LLGACR++
Sbjct: 436 FNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIE-PTAAAWGALLGACRVY 494

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
           +NVE+G +AA  LF +EPD A +YVLLSNI  +A+ W +A ++RK M++ G+ K PG SW
Sbjct: 495 KNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSW 554

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           ++  ++++ F+ GD S++Q + ++ FL+ + E+MR +GY P+T  VL NV++E++E  LC
Sbjct: 555 VQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLC 614

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSE+LA+AFGILN+   TT+RV KNLR+C DCH A K I+KI   +II+RD  RFHHF+
Sbjct: 615 SHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFR 674

Query: 873 NGTCSCGDYW 882
           +G C+C D+W
Sbjct: 675 DGYCTCNDFW 684



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 233/475 (49%), Gaps = 59/475 (12%)

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+     +FD+I E D  +W  +I+   + G    A++ +  +L  NV P  F L+SVA 
Sbjct: 26  DLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAK 85

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC+       L + +++H ++++ G     ++ NAL+ M+ K   V+ A+ +F     +D
Sbjct: 86  ACA---ASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKD 142

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSW ++           + ++  R+M L GI+ + ++++S+LPAC+  + +  G+E+H 
Sbjct: 143 VVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHG 200

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           + LRN+ +  N +V SALV+MY +   ++  R VFD +  + I  WN M+T Y  N+  E
Sbjct: 201 FILRNE-MEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYE 259

Query: 368 EALMLFIKME----------------------------------EVAGLWPNATTMSSVV 393
             L LF +M                                   + +G+ PN  T+ S +
Sbjct: 260 RGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSAL 319

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           P C   E+    + IHG+  +     D  +  AL+ +Y++ G +E+S+ +F+ M  +D V
Sbjct: 320 PGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVV 379

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WNTMI   ++ G+ G++L+L  +M              LD  V   +PNS+T + VL G
Sbjct: 380 AWNTMIMANSMHGKGGESLILFNKM--------------LDSGV---EPNSVTFIGVLSG 422

Query: 514 CGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           C       +G  + ++ +  + +  D    S +VD+ ++ G L  A      MP+
Sbjct: 423 CSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPI 477



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 210/433 (48%), Gaps = 50/433 (11%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           ++AI  Y  +   +++PD F   +V KA A   DL + K+IH   +++G+    + + N 
Sbjct: 59  KKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFN-KDLVLGNA 117

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++M+GKC   +     VFD +  KD VSW SM       G     +  FR M  + +  
Sbjct: 118 LIDMFGKC-KFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRA 176

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           +S T+ S+  AC+     D ++LGR+VHG  LR   E N ++ +AL+ MYA    +  A+
Sbjct: 177 NSLTVSSILPACA-----DYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQAR 231

Query: 238 TLFKSFEDRDLVSWNTI-----------------------------------VSSLSQND 262
            +F S   RD+VSWN +                                   +S   QN 
Sbjct: 232 LVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNG 291

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           +   A+  L +M   GIKP+ ++I S LP C++LE L  GKEIH Y  R+   I++  + 
Sbjct: 292 QHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRH-WFIEDVTIT 350

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           +ALV +Y  C ++E  R VF+ +  K +  WN MI     +    E+L+LF KM + +G+
Sbjct: 351 TALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLD-SGV 409

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGI---HGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            PN+ T   V+  C  S+     EG+   +  + +  +  D    + ++D+ SR GR+E 
Sbjct: 410 EPNSVTFIGVLSGCSHSQL--ADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEE 467

Query: 440 SKTIFDDMEVRDT 452
           +      M +  T
Sbjct: 468 AYDFIRKMPIEPT 480



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 47/297 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW             R+ IL + EM  + I+ ++    ++L A A    + LG+++H  +
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFI 202

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD------------------- 144
           ++      +V V++ LVNMY      +     VFD +  +D                   
Sbjct: 203 LRNEME-GNVYVSSALVNMYAS-SLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYER 260

Query: 145 ----------------QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
                           Q SWN+ I+   + G+ +LAL     M  S ++P+  T+VS   
Sbjct: 261 GLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALP 320

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW---NTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
            C+NL   + LR G+++HG   R   W   +  I  AL+ +YAK G ++ ++ +F +   
Sbjct: 321 GCTNL---ESLRGGKEIHGYVFR--HWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPR 375

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +D+V+WNT++ + S + K  E+++   +M   G++P+ V+   VL  CSH ++ D G
Sbjct: 376 KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 285/799 (35%), Positives = 436/799 (54%), Gaps = 47/799 (5%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNS 150
           DL LG+ +H  +++         VAN+L+ +Y +CG+ +     VFD +   +D VSW +
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGA-VASARNVFDGMRGLRDIVSWTA 121

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGN 208
           M + L R G    +L     ML S + P+++TL +VA AC    L    G  +   VH  
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVH-- 179

Query: 209 SLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             ++G W T I   +AL+ M A+ G +  A+ +F    ++ +V W  ++S   Q +   E
Sbjct: 180 --KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEE 237

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           AV         G +PD  +++S++ AC+ L  +  G ++H+ ALR     D + V   LV
Sbjct: 238 AVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASD-ACVSCGLV 296

Query: 327 DMYCNC---REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           DMY      + ++   +VF+ +    +  W A+I+GY Q+   E  +M+         + 
Sbjct: 297 DMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIK 356

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           PN  T SS++ AC           +H H IK        V NAL+ MY+  G +E ++ +
Sbjct: 357 PNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRV 416

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+ +  R  +S          C   G    L   +  M+                    +
Sbjct: 417 FNQLYERSMIS----------CITEGRDAPLDHRIGRMDM-----------------GIS 449

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           S T  +++    ++  L KG+++HA  ++    +D  V ++LV MY++CG L  A R F+
Sbjct: 450 SSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFN 509

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            +  RNVI+W  +I     HG  +  L L  +M+  G     VKPN+VT+IA+ +ACSH 
Sbjct: 510 ELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG-----VKPNDVTYIAVLSACSHV 564

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G+V EG + F  M+ D+G+ P  +HYAC+VDLL R+G V++A + IN MP + D A  W 
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKAD-ALVWK 623

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           +LLGACR H N+E+GEIAA+N+  LEP   + YVLLSN+Y+ A LWD+   +R  M++  
Sbjct: 624 TLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNN 683

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           + KE G SW+E  +  H+F AGD SH +++ ++G L+ L   ++  GYVPDTS VLH+++
Sbjct: 684 LNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMS 743

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           +E KE  L  HSEK+A+AFG++ T     IR+ KNLRVC DCH A K++SK   REIILR
Sbjct: 744 DELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILR 803

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFH  K+G CSCG+YW
Sbjct: 804 DSNRFHRMKDGECSCGEYW 822



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 269/565 (47%), Gaps = 44/565 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW       AR+   RE++L   EM  S + P+ +   AV  A     +L          
Sbjct: 118 SWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFP-HELYCLVGGVVLG 176

Query: 104 VKYGYGL--SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           + +  GL  + + V + L++M  + G D+    KVFD + EK  V W  +I+   +    
Sbjct: 177 LVHKMGLWGTDIAVGSALIDMLARNG-DLASARKVFDGLIEKTVVVWTLLISRYVQGECA 235

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
           + A+E F   L    EP  +T+ S+  AC+ L     +RLG Q+H  +LR+G   +  + 
Sbjct: 236 EEAVEIFLDFLEDGFEPDRYTMSSMISACTELG---SVRLGLQLHSLALRMGFASDACVS 292

Query: 221 NALMAMYAKLG---RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMAL 276
             L+ MYAK      +D A  +F+     D++SW  ++S   Q+      VM L  +M  
Sbjct: 293 CGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLN 352

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             IKP+ ++ +S+L AC+++   D+G+++HA+ ++++    ++ VG+ALV MY     +E
Sbjct: 353 ESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHT-VGNALVSMYAESGCME 411

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             RRVF+ + ++      +MI+   +   D        +M+    +  +++T +S++ A 
Sbjct: 412 EARRVFNQLYER------SMISCITEGR-DAPLDHRIGRMD----MGISSSTFASLISAA 460

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + +H   +K G G DR+V N+L+ MYSR G +E +   F++++ R+ +SW 
Sbjct: 461 ASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MI+G    G    AL L  +M                  +   KPN +T + VL  C  
Sbjct: 521 SMISGLAKHGYAERALSLFHDM-----------------ILTGVKPNDVTYIAVLSACSH 563

Query: 517 LSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
           +  + +GKE      R+  L   +   + +VD+ A+ G +  A    + MP++ + + W 
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWK 623

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAE 599
            ++ A   H +  EV E+    V E
Sbjct: 624 TLLGACRSH-DNIEVGEIAAKNVIE 647


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/686 (38%), Positives = 394/686 (57%), Gaps = 39/686 (5%)

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q+H   +  G + N F+M  L+   + LG++  A+ LF  F   D+  WN I+ S S+N+
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG------KEIHAYALRNDILI 316
            + + V   R M   G+ PDG +   VL AC+  E+LD G       +I  Y   +D+ +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACT--ELLDFGLSCIIHGQIIKYGFGSDVFV 191

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N      LV +Y  C  +   + VFD +  + I  W ++I+GY QN    EAL +F +M
Sbjct: 192 QN-----GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQM 246

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               G+ P+   + S++ A    +       IHG  IK+GL  +  +  +L   Y++ G 
Sbjct: 247 RN-NGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGL 305

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           + ++K+ FD M+  + + WN MI+GY   G   +A+ L   M       +RN        
Sbjct: 306 VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYM------ISRN-------- 351

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               KP+S+T+ + +     + +L   + +  Y  ++   +D+ V ++L+DMYAKCG + 
Sbjct: 352 ---IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVE 408

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
           FARRVFD    ++V+ W+ +IM YG+HG+G E + L   M   G     V PN+VTFI L
Sbjct: 409 FARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAG-----VFPNDVTFIGL 463

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             AC+HSG+V EG +LF+ MKD + I P  +HY+CVVDLLGRAG + +A   I  +P E 
Sbjct: 464 LTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIE- 521

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
                W +LL AC+I++ V +GE AA  LF L+P    HYV LSN+Y+S+ LWD    VR
Sbjct: 522 PGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVR 581

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
             M+E G+ K+ G S IE   ++  F  GD SH  ++++   L+ L  R+++ G+VP T 
Sbjct: 582 VLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTE 641

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
            VLH++N EEKE  L  HSE++A+A+G+++T PGTT+R+ KNLR C +CH A K ISK+ 
Sbjct: 642 SVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLV 701

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REII+RD  RFHHFK+G CSCGDYW
Sbjct: 702 EREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 195/356 (54%), Gaps = 8/356 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +RS +R+N +R+ +  Y  M  + + PD F FP VLKA   + D  L   IH  ++
Sbjct: 122 WNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQII 181

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           KYG+G S V V N LV +Y KCG  +     VFD +  +  VSW S+I+   + GK   A
Sbjct: 182 KYGFG-SDVFVQNGLVALYAKCG-HIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEA 239

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F  M  + V+P    LVS+  A +++   D L  GR +HG  +++G E    ++ +L
Sbjct: 240 LRMFSQMRNNGVKPDWIALVSILRAYTDV---DDLEQGRSIHGFVIKMGLEDEPALLISL 296

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            A YAK G V  AK+ F   +  +++ WN ++S  ++N    EAV     M  R IKPD 
Sbjct: 297 TAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDS 356

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++ S + A + +  L+  + +  Y  +++   D  FV ++L+DMY  C  VE  RRVFD
Sbjct: 357 VTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSD-IFVNTSLIDMYAKCGSVEFARRVFD 415

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             SDK + +W+AMI GYG +    EA+ L+  M++ AG++PN  T   ++ AC  S
Sbjct: 416 RNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQ-AGVFPNDVTFIGLLTACNHS 470



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 215/447 (48%), Gaps = 24/447 (5%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD     D   WN++I +  R   +   +E +R M ++ V P  FT   V  AC+ L 
Sbjct: 109 KLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELL 168

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
                 L   +HG  ++ G   + F+ N L+A+YAK G +  AK +F     R +VSW +
Sbjct: 169 ---DFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTS 225

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           I+S  +QN K +EA+    QM   G+KPD +++ S+L A + ++ L+ G+ IH + ++  
Sbjct: 226 IISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMG 285

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            L D   +  +L   Y  C  V   +  FD +    + +WNAMI+GY +N + EEA+ LF
Sbjct: 286 -LEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLF 344

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
             M     + P++ T+ S V A  +  +    + +  +  K   G D +V  +L+DMY++
Sbjct: 345 HYMIS-RNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAK 403

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G +E ++ +FD    +D V W+ MI GY + GQ  +A+ L   M+       +  V+  
Sbjct: 404 CGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMK-------QAGVF-- 454

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                   PN +T + +L  C     + +G E+        +       S +VD+  + G
Sbjct: 455 --------PNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAG 506

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMA 579
            L  A      +P+   V  W  ++ A
Sbjct: 507 YLGEACAFIMKIPIEPGVSVWGALLSA 533



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 30/283 (10%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +   A++ +  EA+  + +M  + ++PD  A  ++L+A   + DL  
Sbjct: 214 GLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQ 273

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIAT 154
           G+ IH  V+K G       +  +L   Y KCG  +  V K  FD++   + + WN+MI+ 
Sbjct: 274 GRSIHGFVIKMGLEDEPALLI-SLTAFYAKCG--LVTVAKSFFDQMKTTNVIMWNAMISG 330

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
             + G  + A+  F  M+  N++P S T+ S  LA + +               SL + +
Sbjct: 331 YAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG--------------SLELAQ 376

Query: 215 W------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           W            + F+  +L+ MYAK G V+ A+ +F    D+D+V W+ ++     + 
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +  EA+     M   G+ P+ V+   +L AC+H  ++  G E+
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWEL 479


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 303/847 (35%), Positives = 446/847 (52%), Gaps = 103/847 (12%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS--W 148
           + L+  K +H   +  G+ L+S T    L+  Y    S    +  +   +T        W
Sbjct: 35  KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWW 94

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N +I     F   + AL  FR M   +  P  +T   V  AC  +S      LG  +HG 
Sbjct: 95  NQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEIS---NFELGASIHGC 151

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR---DLVSWNTIVSSLSQNDKF 264
            +R+G E N F+ NA+++MY K   V  A+ +F     R   D V+WN+IVS  S     
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211

Query: 265 LEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             AV   R+M +  GI PD V + ++LP C +L +   G+++H + +R+  L+++ FVG+
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSG-LVEDVFVGN 270

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE----- 378
           ALVDMY  C ++E   +VF+ +  K +  WNAM+TGY QN   E+AL LF KM E     
Sbjct: 271 ALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES 330

Query: 379 --------VAGLW---------------------PNATTMSSVVPACVRSEAFPDKEGIH 409
                   ++G                       PN  T+ S++ AC    A    +  H
Sbjct: 331 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETH 390

Query: 410 GHAIKLGLG-------RDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMIT 460
            +++K  L         D  V NAL+DMY++   +E+++ +FD++  + RD V+W  MI 
Sbjct: 391 CYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 450

Query: 461 GYTICGQHGDA---LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           GY    QHGDA   L L  EM            + +D  ++   PN  T+  VL  C  L
Sbjct: 451 GY---AQHGDANHALQLFSEM------------FKIDNCIV---PNDFTISCVLMACARL 492

Query: 518 SALAKGKEIHAYAIR-NMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           +AL  GK+IHAY +R + + +DV+ V + L+DMY+K G ++ A+ VFD M  RN ++W  
Sbjct: 493 AALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTS 552

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           ++  YGMHG  ++   +   M  E      +  + +TF+ +  ACSHSGM          
Sbjct: 553 LLTGYGMHGRSEDAFRVFDEMRKEA-----LVLDGITFLVVLYACSHSGM---------- 597

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
              D+G++P  +HYAC+VDLLGRAG++ +A +LIN MP E      W +LL ACRIH N 
Sbjct: 598 ---DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIE-PTPVVWIALLSACRIHSNE 653

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           E+ E AA+ L  L+ D    Y LLSNIY++A+ W     +   MK  G++K PG SW++ 
Sbjct: 654 ELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKG 713

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
              +  F  GD +H QS++++  L +L +R++        +  LH+V++EEK   L  HS
Sbjct: 714 RKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDDEEKGDQLSEHS 766

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLA+A+ IL  PPG  IR+ KNLR+C D H A  +IS I   EIILRD  RFH FKNG+
Sbjct: 767 EKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGS 826

Query: 876 CSCGDYW 882
           CSC  YW
Sbjct: 827 CSCKGYW 833



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 183/616 (29%), Positives = 290/616 (47%), Gaps = 105/616 (17%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W + +R     N    A+  +  M      PD++ FP V KA   I +  LG  IH  V+
Sbjct: 94  WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKW 161
           + G+  S+V V N +++MYGKC + +    KVFD +  +   D V+WNS+++        
Sbjct: 154 RLGFE-SNVFVCNAVISMYGKCKAVV-HARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211

Query: 162 DLALEAFR-MMLYSNVEPSSFTLVSVALACSNLSRRDGLRL-GRQVHGNSLRVG-EWNTF 218
           ++A+  FR M +   + P +  +V++   C  L    GL L GRQVHG  +R G   + F
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYL----GLGLCGRQVHGFCVRSGLVEDVF 267

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-------------- 264
           + NAL+ MYAK G+++DA  +F+    +D+V+WN +V+  SQN +F              
Sbjct: 268 VGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEK 327

Query: 265 ---------------------LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
                                 EA+   RQM     +P+ V++ S+L AC+ +  L  GK
Sbjct: 328 IESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGK 387

Query: 304 EIHAYALR-------NDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWN 354
           E H Y+++       ND   D+  V +AL+DMY  C+ +E  R +FD I   D+ +  W 
Sbjct: 388 ETHCYSVKFILKGEHNDD-TDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 446

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            MI GY Q+     AL LF +M ++   + PN  T+S V+ AC R  A    + IH + +
Sbjct: 447 VMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVL 506

Query: 414 KLGLGRDR------YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +    R R      +V N L+DMYS+ G ++ ++ +FD M  R+ VSW +++TGY + G+
Sbjct: 507 R----RSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGR 562

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC---GALSALAKGK 524
             DA  +  EM        R     LD          IT + VL  C   G    +  G 
Sbjct: 563 SEDAFRVFDEM--------RKEALVLD---------GITFLVVLYACSHSGMDFGVDPGV 605

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAYGMH 583
           E +A                +VD+  + G L  A R+ + MP+    + W  ++ A  +H
Sbjct: 606 EHYA---------------CMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 650

Query: 584 GEGQEVLELLKNMVAE 599
              +E+ E     + E
Sbjct: 651 SN-EELAEFAAKKLLE 665



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 22/298 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     EA+  + +M     +P+     ++L A A +  L  GK+ H + 
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393

Query: 104 VKY------GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATL 155
           VK+            + V N L++MY KC S +     +FD I  KD+  V+W  MI   
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKS-LEVARAMFDEICPKDRDVVTWTVMIGGY 452

Query: 156 CRFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
            + G  + AL+ F  M   +  + P+ FT+  V +AC+ L+    L+ G+Q+H   LR  
Sbjct: 453 AQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA---ALKFGKQIHAYVLRRS 509

Query: 214 EWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
             ++   F+ N L+ MY+K G VD A+ +F S   R+ VSW ++++    + +  +A   
Sbjct: 510 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRV 569

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEM---LDTGKEIHAYALRNDILIDNSFVGSAL 325
             +M    +  DG++   VL ACSH  M   +D G E   YA   D+L     +G A+
Sbjct: 570 FDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVE--HYACMVDLLGRAGRLGEAM 625


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/732 (35%), Positives = 397/732 (54%), Gaps = 89/732 (12%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N+L+++YAK GR+ DA+ +F    +RD VSW  +V  L++  +F EA+     M 
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+ P   ++ +VL +C+  E    G+++H++ ++   L     V +++++MY  C + 
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLG-LSSCVPVANSVLNMYGKCGDA 213

Query: 336 ECGRRVFDFISDKKIALWNAM-------------------------------ITGYGQNE 364
           E  R VF+ + ++ ++ WNAM                               I GY QN 
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            + +AL  F +M   + + P+  T++SV+ AC         + +H + ++  +     V 
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 425 NALMDMYSRMGRIEISKTI---------------------------------FDDMEVRD 451
           NAL+ MY++ G +E ++ +                                 FD M  RD
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V+W  MI GY   G + +A+ L R M                     P+PNS T+  VL
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSG-----------------PEPNSYTVAAVL 436

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-V 570
             C +L+ L  GK+IH  AIR++      V +++V MYA+ G L +ARRVFD +  R   
Sbjct: 437 SVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKET 496

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           +TW  +I+A   HG G++ + L + M+  G     VKP+ +TF+ + +AC+H G V EG 
Sbjct: 497 VTWTSMIVALAQHGLGEDAVGLFEEMLRVG-----VKPDRITFVGVLSACTHVGFVDEGK 551

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             F +++D +GI P   HYAC+VDLL RAG   +A + I  MP E D A AW SLL ACR
Sbjct: 552 RYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPD-AIAWGSLLSACR 610

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H+N ++ E+AA+ L  ++P  +  Y  LSN+YS+   W+ A  + K+ K+  V+KE G 
Sbjct: 611 VHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGF 670

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SW   G+ +H F A D  H Q + ++     + + ++K G+VPD   VLH+V++E KE +
Sbjct: 671 SWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEM 730

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG+++TP  TT+R+ KNLRVCNDCH A KFISK+  REIILRD  RFHH
Sbjct: 731 LSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHH 790

Query: 871 FKNGTCSCGDYW 882
           FK+G CSC DYW
Sbjct: 791 FKDGFCSCKDYW 802



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 254/535 (47%), Gaps = 90/535 (16%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+L+++Y K G  + D   VF  + E+D VSW  M+  L R G++  A++ F  M+   +
Sbjct: 100 NSLLSLYAKSGR-LADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGL 158

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG----------------------- 213
            P+ FTL +V  +C+    R    +GR+VH   +++G                       
Sbjct: 159 SPTQFTLTNVLSSCAATEARG---VGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAET 215

Query: 214 ---------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
                    E +    NA++++ A LGR+D A +LF++  DR +VSWN +++  +QN   
Sbjct: 216 ARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLN 275

Query: 265 LEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI----LIDNS 319
            +A+ F  R ++   + PD  +I SVL AC++L M+  GK++HAY LR+ +     + N+
Sbjct: 276 AKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNA 335

Query: 320 FVG----------------------------SALVDMYCNCREVECGRRVFDFISDKKIA 351
            +                             +AL++ Y    +++  R +FD +S++ + 
Sbjct: 336 LISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVV 395

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W AMI GY QN +++EA+ LF  M   +G  PN+ T+++V+  C         + IH  
Sbjct: 396 AWTAMIVGYEQNGHNDEAMELFRLMIR-SGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           AI+    +   V N+++ MY+R G +  ++ +FD +  R +TV+W +MI      G   D
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAY 529
           A+ L  EM  +                   KP+ IT + VL  C  +  + +GK      
Sbjct: 515 AVGLFEEMLRVG-----------------VKPDRITFVGVLSACTHVGFVDEGKRYFQQL 557

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
             ++ +  ++   + +VD+ A+ G  + A+     MPV  + I W  ++ A  +H
Sbjct: 558 QDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 231/502 (46%), Gaps = 89/502 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R  +F EAI  +++M    + P  F    VL + A  +   +G+++H+ V
Sbjct: 129 SWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFV 188

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S V VAN+++NMYGKCG D      VF+R+ E+   SWN+M++     G+ DL
Sbjct: 189 VKLGLS-SCVPVANSVLNMYGKCG-DAETARAVFERMPERSVSSWNAMVSLDAHLGRMDL 246

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           AL  F                                RM+ YS + P  FT+ SV  AC+
Sbjct: 247 ALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA 306

Query: 192 NLSRRDGLRLGRQVHGNSLR-----VGEWNTFIMNALMAMYAKLGRVDD----------- 235
           NL     + +G+QVH   LR     +G+    + NAL++MYAK G V++           
Sbjct: 307 NLGM---VSIGKQVHAYILRSRMPYIGQ----VTNALISMYAKSGSVENARGVMQQAVMA 359

Query: 236 ----------------------AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
                                 A+ +F    +RD+V+W  ++    QN    EA+   R 
Sbjct: 360 DLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRL 419

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G +P+  ++A+VL  C+ L  L+ GK+IH  A+R+ +   +S V +++V MY    
Sbjct: 420 MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS-LQEQSSSVSNSIVTMYARSG 478

Query: 334 EVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            +   RRVFD +   K+   W +MI    Q+   E+A+ LF +M  V G+ P+  T   V
Sbjct: 479 SLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV-GVKPDRITFVGV 537

Query: 393 VPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           + AC     F D+   +   +  K G+  +      ++D+ +R G    ++     M V 
Sbjct: 538 LSACTHV-GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVE 596

Query: 451 -DTVSWNTMITGYTICGQHGDA 471
            D ++W ++++    C  H +A
Sbjct: 597 PDAIAWGSLLSA---CRVHKNA 615



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 90/293 (30%)

Query: 406 EGIHGHAIKLGL--------------------------------------GRDRYVQNAL 427
             IH  A+K GL                                       R+ +  N+L
Sbjct: 43  RAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSL 102

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           + +Y++ GR+  ++ +F +M  RD VSW  M+ G    G+ G+A+ +             
Sbjct: 103 LSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF------------ 150

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                LD       P   TL  VL  C A  A   G+++H++ ++  L++ V V +++++
Sbjct: 151 -----LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLN 205

Query: 548 MYAKCGCLNFARRVFDLMPVRNV-------------------------------ITWNVI 576
           MY KCG    AR VF+ MP R+V                               ++WN +
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAV 265

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           I  Y  +G   + L     M++  +    + P+E T  ++ +AC++ GMVS G
Sbjct: 266 IAGYNQNGLNAKALWFFSRMLSYST----MAPDEFTITSVLSACANLGMVSIG 314


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 452/794 (56%), Gaps = 32/794 (4%)

Query: 91   QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
            +D SLG+QI   VVK G   S + V N+L++M G  G+  +  Y +FD+++E+D +SWNS
Sbjct: 264  KDESLGRQIIGQVVKSGLE-SKLAVENSLISMLGSMGNVDYANY-IFDQMSERDTISWNS 321

Query: 151  MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
            + A   + G  + +   F +M   + E +S T   V+   S L   D  + GR +HG  +
Sbjct: 322  IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT---VSTLLSVLGHVDHQKWGRGIHGLVV 378

Query: 211  RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            ++G +    + N L+ MYA  GR  +A  +FK    +DL+SWN++++S   + + L+A+ 
Sbjct: 379  KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 438

Query: 270  FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             L  M   G   + V+  S L AC   +  + G+ +H   + +  L  N  +G+ALV MY
Sbjct: 439  LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG-LFYNQIIGNALVSMY 497

Query: 330  CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                E+   RRV   +  + +  WNA+I GY ++E  ++AL  F  M  V G+  N  T+
Sbjct: 498  GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITV 556

Query: 390  SSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
             SV+ AC+      ++ + +H + +  G   D +V+N+L+ MY++ G +  S+ +F+ ++
Sbjct: 557  VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616

Query: 449  VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
             R+ ++WN M+      G   + L L+ +M        R+    LD+          +  
Sbjct: 617  NRNIITWNAMLAANAHHGHGEEVLKLVSKM--------RSFGVSLDQ---------FSFS 659

Query: 509  TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
              L     L+ L +G+++H  A++     D  + +A  DMY+KCG +    ++      R
Sbjct: 660  EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 719

Query: 569  NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
            ++ +WN++I A G HG  +EV      M+  G     +KP  VTF++L  ACSH G+V +
Sbjct: 720  SLPSWNILISALGRHGYFEEVCATFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDK 774

Query: 629  GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            G+  +  +  D+G+EP+ +H  CV+DLLGR+G++ +A   I+ MP + +    W SLL +
Sbjct: 775  GLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLAS 833

Query: 689  CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
            C+IH N++ G  AA+NL  LEP+  S YVL SN++++   W+   +VRK+M    ++K+ 
Sbjct: 834  CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 893

Query: 749  GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
             CSW++  D++  F  GD +H Q+ +++  LE++ + +++ GYV DTS  L + +EE+KE
Sbjct: 894  ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 953

Query: 809  TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
              L  HSE+LA+A+ +++TP G+T+R+ KNLR+C+DCH   KF+S++  R I+LRD  RF
Sbjct: 954  HNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF 1013

Query: 869  HHFKNGTCSCGDYW 882
            HHF+ G CSC DYW
Sbjct: 1014 HHFERGLCSCKDYW 1027



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 276/610 (45%), Gaps = 68/610 (11%)

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
           + G+ +HA  VK G    SV   NTL+NMY K G  +     +FD +  +++VSWN+M++
Sbjct: 89  TTGRAVHALCVK-GLVRLSVLHTNTLINMYTKFGR-VKPARHLFDIMPVRNEVSWNTMMS 146

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG--LRLGRQVHGNSLR 211
            + R G +   +E FR M    ++PSSF + S+  AC     R G   R G QVHG   +
Sbjct: 147 GIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG----RSGSMFREGVQVHGFVAK 202

Query: 212 VGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   + ++  A++ +Y   G V  ++ +F+   DR++VSW +++   S   +  E +  
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 262

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            +  +L G +  G  + S                     L + + ++NS     L+ M  
Sbjct: 263 YKDESL-GRQIIGQVVKS--------------------GLESKLAVENS-----LISMLG 296

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM----EEVAGLWPNA 386
           +   V+    +FD +S++    WN++   Y QN + EE+  +F  M    +EV     N+
Sbjct: 297 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-----NS 351

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           TT+S+++      +      GIHG  +K+G      V N L+ MY+  GR   +  +F  
Sbjct: 352 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 411

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  +D +SWN+++  +   G+  DAL LL  M +  +                   N +T
Sbjct: 412 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-----------------VNYVT 454

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             + L  C       KG+ +H   + + L  + ++G+ALV MY K G ++ +RRV   MP
Sbjct: 455 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+V+ WN +I  Y    +  + L   + M  EG     V  N +T +++ +AC   G +
Sbjct: 515 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-----VSSNYITVVSVLSACLLPGDL 569

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            E     +      G E        ++ +  + G +  +  L N +         W+++L
Sbjct: 570 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR--NIITWNAML 627

Query: 687 GACRIHQNVE 696
            A   H + E
Sbjct: 628 AANAHHGHGE 637



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 263/569 (46%), Gaps = 43/569 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW     + A++    E+   +  M R   + ++     +L  +  +     G+ IH  V
Sbjct: 318 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 377

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+  S V V NTL+ MY   G  + +   VF ++  KD +SWNS++A+    G+   
Sbjct: 378 VKMGFD-SVVCVCNTLLRMYAGAGRSV-EANLVFKQMPTKDLISWNSLMASFVNDGRSLD 435

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           AL     M+ S    +  T  S   AC      D    GR +HG  +  G  +N  I NA
Sbjct: 436 ALGLLCSMISSGKSVNYVTFTSALAACFT---PDFFEKGRILHGLVVVSGLFYNQIIGNA 492

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY K+G + +++ +      RD+V+WN ++   ++++   +A+   + M + G+  +
Sbjct: 493 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552

Query: 283 GVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            +++ SVL AC    ++L+ GK +HAY +      D   V ++L+ MY  C ++   + +
Sbjct: 553 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH-VKNSLITMYAKCGDLSSSQDL 611

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ + ++ I  WNAM+     + + EE L L  KM    G+  +  + S  + A  +   
Sbjct: 612 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEGLSAAAKLAV 670

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNTMIT 460
             + + +HG A+KLG   D ++ NA  DMYS+ G I E+ K +   +  R   SWN +I+
Sbjct: 671 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN-RSLPSWNILIS 729

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G+HG    +      M E              +  KP  +T +++L  C     +
Sbjct: 730 A---LGRHGYFEEVCATFHEMLE--------------MGIKPGHVTFVSLLTACSHGGLV 772

Query: 521 AKGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGCLNFARRVFDLMPVR-NVITW 573
            KG      A  +M+A D  +  A+      +D+  + G L  A      MP++ N + W
Sbjct: 773 DKG-----LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 827

Query: 574 NVIIMAYGMHG---EGQEVLELLKNMVAE 599
             ++ +  +HG    G++  E L  +  E
Sbjct: 828 RSLLASCKIHGNLDRGRKAAENLSKLEPE 856



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 245/529 (46%), Gaps = 56/529 (10%)

Query: 202 GRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR VH   ++ +   +    N L+ MY K GRV  A+ LF     R+ VSWNT++S + +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNS 319
              +LE + F R+M   GIKP    IAS++ AC     M   G ++H +  ++ +L D  
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD-V 209

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           +V +A++ +Y     V C R+VF+ + D+ +  W +++ GY      EE + ++      
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------ 263

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
                             + E+   +  I G  +K GL     V+N+L+ M   MG ++ 
Sbjct: 264 ------------------KDESLGRQ--IIGQVVKSGLESKLAVENSLISMLGSMGNVDY 303

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  IFD M  RDT+SWN++   Y   G   ++  +   M+   +E               
Sbjct: 304 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE--------------- 348

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
              NS T+ T+L   G +     G+ IH   ++    + V V + L+ MYA  G    A 
Sbjct: 349 --VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 406

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VF  MP +++I+WN ++ ++   G   + L LL +M++ G        N VTF +  AA
Sbjct: 407 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK-----SVNYVTFTSALAA 461

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C       +G  + + +    G+  +      +V + G+ G++ ++ +++  MP      
Sbjct: 462 CFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DV 518

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
            AW++L+G     ++ +    A Q + +    V+S+Y+ + ++ S+  L
Sbjct: 519 VAWNALIGGYAEDEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLL 565



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 15/178 (8%)

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           G   ++    G+ +HA  ++ ++   V+  + L++MY K G +  AR +FD+MPVRN ++
Sbjct: 81  GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS 140

Query: 573 WNVI---IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG-MVSE 628
           WN +   I+  G++ EG   +E  + M   G     +KP+     +L  AC  SG M  E
Sbjct: 141 WNTMMSGIVRVGLYLEG---MEFFRKMCDLG-----IKPSSFVIASLVTACGRSGSMFRE 192

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           G+ + +      G+         ++ L G  G V  + ++   MP       +W+SL+
Sbjct: 193 GVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLM 247


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/685 (38%), Positives = 377/685 (55%), Gaps = 25/685 (3%)

Query: 200 RLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGR  H   ++       +FI N L+ MY+KL R + A+ L     +R +V+W  +++ 
Sbjct: 23  RLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             QN +F  A+     M    I+P+  +      A   L     GK++HA A++    I 
Sbjct: 83  SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG-QIS 141

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           + FVG +  DMY      E  R++FD + ++ IA WNA ++        ++AL  FI+  
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFR 201

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G  PN  T  + + AC  +        +HG  ++ G   D  V N L+D Y +  ++
Sbjct: 202 H-EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQV 260

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             S+ IF  +   + VSW +MI  Y               +QN EEEK    +  L    
Sbjct: 261 GCSEIIFSGISKPNDVSWCSMIVSY---------------VQNDEEEKA--CLVFLRARK 303

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              +P    + +VL  C  LS L  GK +H  A++  +  ++ VGSALVDMY KCG +  
Sbjct: 304 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 363

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A R FD MP RN++TWN +I  Y   G+    + L   M     R   V PN VTF+ + 
Sbjct: 364 AERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR---VAPNYVTFVCVL 420

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACS +G V+ GM++F  M+  YGIEP  +HYACVVDLLGRAG VE AYQ I  MP    
Sbjct: 421 SACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIR-P 479

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W +LLGA ++    E+G++AA NLF L+P  + ++VLLSN++++A  W++A  VRK
Sbjct: 480 TVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRK 539

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
           +MK++G++K  GCSWI  G+ +H F A D SH+++ ++   L  L   M   GY+PDTS 
Sbjct: 540 EMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSF 599

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
            L ++ EEEK   +  HSEK+A+AFG+++ P G  IR+ KNLR+C DCH A KFIS I  
Sbjct: 600 ALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVG 659

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REII+RD   FH F++  CSC DYW
Sbjct: 660 REIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 237/485 (48%), Gaps = 34/485 (7%)

Query: 2   ASSAQCLTLLPSPPLSSLQTH------QPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           A+ AQ +  L +P  S +  H      +     +  L L  +  R   +W   +    ++
Sbjct: 27  AAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQN 86

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
            +F  A+  +  M R  IQP++F FP   KA   ++   +GKQ+HA  VK G  +S V V
Sbjct: 87  GRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ-ISDVFV 145

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
             +  +MY K G    +  K+FD + E++  +WN+ ++     G++D AL AF    +  
Sbjct: 146 GCSAFDMYSKAGLTE-EARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEG 204

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
            EP+  T  +   AC+  S    LRLGRQ+HG  L+ G E +  + N L+  Y K  +V 
Sbjct: 205 WEPNLITFCAFLNACAGASY---LRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            ++ +F      + VSW +++ S  QND+  +A +   +    GI+P    ++SVL AC+
Sbjct: 262 CSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            L +L+ GK +H  A++   ++ N FVGSALVDMY  C  +E   R FD + ++ +  WN
Sbjct: 322 GLSVLEVGKSVHTLAVKA-CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWN 380

Query: 355 AMITGYGQNEYDEEALMLFIKM----EEVAGLWPNATTMSSVVPACVRS-------EAFP 403
           AMI GY      + A+ LF +M      VA   PN  T   V+ AC R+       E F 
Sbjct: 381 AMIGGYAHQGQADMAVTLFDEMTCGSHRVA---PNYVTFVCVLSACSRAGSVNVGMEIFE 437

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGY 462
              G +G    +  G + Y    ++D+  R G +E +      M +R TVS W  ++   
Sbjct: 438 SMRGRYG----IEPGAEHYA--CVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGAS 491

Query: 463 TICGQ 467
            + G+
Sbjct: 492 KMFGK 496


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/652 (38%), Positives = 391/652 (59%), Gaps = 31/652 (4%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F    +R+LV+W  +++  +Q     +A+     M L G  PD  + +SVL AC+ 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIAL 352
           L +L  GK++H+  +R  + +D   VG +LVDMY  C     V+  R+VF+ + +  +  
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVC-VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122

Query: 353 WNAMITGYGQN-EYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           W A+IT Y Q+ E D+EA+ LF KM  ++G + PN  + SSV+ AC         E ++ 
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKM--ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 180

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +A+KLG+     V N+L+ MY+R GR+E ++  FD +  ++ VS+N ++ GY    +  +
Sbjct: 181 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 240

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A +L             N + D    +     ++ T  ++L G  ++ A+ KG++IH   
Sbjct: 241 AFLLF------------NEIADTGIGI-----SAFTFASLLSGAASIGAMGKGEQIHGRL 283

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           ++    ++  + +AL+ MY++CG +  A +VF+ M  RNVI+W  +I  +  HG     L
Sbjct: 284 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 343

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           E+   M+  G+     KPNE+T++A+ +ACSH GM+SEG   F  M  ++GI P  +HYA
Sbjct: 344 EMFHKMLETGT-----KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 398

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VDLLGR+G + +A + IN MP   D A  W +LLGACR+H N E+G  AA+ +   EP
Sbjct: 399 CMVDLLGRSGLLVEAMEFINSMPLMAD-ALVWRTLLGACRVHGNTELGRHAAEMILEQEP 457

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           D  + Y+LLSN+++SA  W   + +RK MKE  + KE GCSWIE  + +H+F  G+ SH 
Sbjct: 458 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 517

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           Q+ Q++  L+ L+ ++++ GY+PDT  VLH++ EE+KE  L  HSEK+A+AFG+++T   
Sbjct: 518 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQS 577

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IR+ KNLRVC DCH A K+IS    REI++RD  RFHH KNG CSC DYW
Sbjct: 578 KPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 241/460 (52%), Gaps = 33/460 (7%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           YKVFD++ E++ V+W  MI    + G    A++ F  M  S   P  FT  SV  AC+ L
Sbjct: 5   YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 64

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL---GRVDDAKTLFKSFEDRDLV 249
                L LG+Q+H   +R+G   +  +  +L+ MYAK    G VDD++ +F+   + +++
Sbjct: 65  GL---LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 250 SWNTIVSSLSQN---DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           SW  I+++ +Q+   DK  EA+    +M    I+P+  S +SVL AC +L    TG++++
Sbjct: 122 SWTAIITAYAQSGECDK--EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 179

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           +YA++  I   N  VG++L+ MY     +E  R+ FD + +K +  +NA++ GY +N   
Sbjct: 180 SYAVKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           EEA +LF ++ +  G+  +A T +S++       A    E IHG  +K G   ++ + NA
Sbjct: 239 EEAFLLFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 297

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+ MYSR G IE +  +F++ME R+ +SW +MITG+    +HG A   L     M E   
Sbjct: 298 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF---AKHGFATRALEMFHKMLETGT 354

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSAL 545
                         KPN IT + VL  C  +  +++G K  ++    + +   +   + +
Sbjct: 355 --------------KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 400

Query: 546 VDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHG 584
           VD+  + G L  A    + MP+  + + W  ++ A  +HG
Sbjct: 401 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 440



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 233/451 (51%), Gaps = 29/451 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+    R+AI  +++M  S   PD F + +VL A   +  L+LGKQ+H+ V
Sbjct: 18  TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV 77

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++ G  L  V V  +LV+MY KC +D  + D  KVF+++ E + +SW ++I    + G+ 
Sbjct: 78  IRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 136

Query: 162 DL-ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FI 219
           D  A+E F  M+  ++ P+ F+  SV  AC NLS       G QV+  ++++G  +   +
Sbjct: 137 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP---YTGEQVYSYAVKLGIASVNCV 193

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N+L++MYA+ GR++DA+  F    +++LVS+N IV   ++N K  EA +   ++A  GI
Sbjct: 194 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 253

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
                + AS+L   + +  +  G++IH   L+      N  + +AL+ MY  C  +E   
Sbjct: 254 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG-YKSNQCICNALISMYSRCGNIEAAF 312

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR- 398
           +VF+ + D+ +  W +MITG+ ++ +   AL +F KM E  G  PN  T  +V+ AC   
Sbjct: 313 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET-GTKPNEITYVAVLSACSHV 371

Query: 399 ------SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RD 451
                  + F      HG   ++    + Y    ++D+  R G +  +    + M +  D
Sbjct: 372 GMISEGQKHFNSMYKEHGIVPRM----EHYA--CMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 452 TVSWNTM-----ITGYTICGQHGDALMLLRE 477
            + W T+     + G T  G+H   ++L +E
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQE 456


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/652 (38%), Positives = 391/652 (59%), Gaps = 31/652 (4%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F    +R+LV+W  +++  +Q     +A+     M L G  PD  + +SVL AC+ 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIAL 352
           L +L  GK++H+  +R  + +D   VG +LVDMY  C     V+  R+VF+ + +  +  
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVC-VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127

Query: 353 WNAMITGYGQN-EYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           W A+IT Y Q+ E D+EA+ LF KM  ++G + PN  + SSV+ AC         E ++ 
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKM--ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 185

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +A+KLG+     V N+L+ MY+R GR+E ++  FD +  ++ VS+N ++ GY    +  +
Sbjct: 186 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 245

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A +L             N + D    +     ++ T  ++L G  ++ A+ KG++IH   
Sbjct: 246 AFLLF------------NEIADTGIGI-----SAFTFASLLSGAASIGAMGKGEQIHGRL 288

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           ++    ++  + +AL+ MY++CG +  A +VF+ M  RNVI+W  +I  +  HG     L
Sbjct: 289 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 348

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           E+   M+  G+     KPNE+T++A+ +ACSH GM+SEG   F  M  ++GI P  +HYA
Sbjct: 349 EMFHKMLETGT-----KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 403

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VDLLGR+G + +A + IN MP   D A  W +LLGACR+H N E+G  AA+ +   EP
Sbjct: 404 CMVDLLGRSGLLVEAMEFINSMPLMAD-ALVWRTLLGACRVHGNTELGRHAAEMILEQEP 462

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           D  + Y+LLSN+++SA  W   + +RK MKE  + KE GCSWIE  + +H+F  G+ SH 
Sbjct: 463 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 522

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           Q+ Q++  L+ L+ ++++ GY+PDT  VLH++ EE+KE  L  HSEK+A+AFG+++T   
Sbjct: 523 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQS 582

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IR+ KNLRVC DCH A K+IS    REI++RD  RFHH KNG CSC DYW
Sbjct: 583 KPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 245/468 (52%), Gaps = 34/468 (7%)

Query: 127 GSDMW-DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
           GS +W   YKVFD++ E++ V+W  MI    + G    A++ F  M  S   P  FT  S
Sbjct: 2   GSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 61

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL---GRVDDAKTLFK 241
           V  AC+ L     L LG+Q+H   +R+G   +  +  +L+ MYAK    G VDD++ +F+
Sbjct: 62  VLSACTELGL---LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 118

Query: 242 SFEDRDLVSWNTIVSSLSQN---DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
              + +++SW  I+++ +Q+   DK  EA+    +M    I+P+  S +SVL AC +L  
Sbjct: 119 QMPEHNVMSWTAIITAYAQSGECDK--EAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 176

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
             TG+++++YA++  I   N  VG++L+ MY     +E  R+ FD + +K +  +NA++ 
Sbjct: 177 PYTGEQVYSYAVKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 235

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY +N   EEA +LF ++ +  G+  +A T +S++       A    E IHG  +K G  
Sbjct: 236 GYAKNLKSEEAFLLFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 294

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            ++ + NAL+ MYSR G IE +  +F++ME R+ +SW +MITG+    +HG A   L   
Sbjct: 295 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF---AKHGFATRALEMF 351

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLAT 537
             M E                 KPN IT + VL  C  +  +++G K  ++    + +  
Sbjct: 352 HKMLETGT--------------KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 397

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHG 584
            +   + +VD+  + G L  A    + MP+  + + W  ++ A  +HG
Sbjct: 398 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 445



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 229/445 (51%), Gaps = 17/445 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+    R+AI  +++M  S   PD F + +VL A   +  L+LGKQ+H+ V
Sbjct: 23  TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV 82

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++ G  L  V V  +LV+MY KC +D  + D  KVF+++ E + +SW ++I    + G+ 
Sbjct: 83  IRLGLALD-VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 141

Query: 162 DL-ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FI 219
           D  A+E F  M+  ++ P+ F+  SV  AC NLS       G QV+  ++++G  +   +
Sbjct: 142 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP---YTGEQVYSYAVKLGIASVNCV 198

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N+L++MYA+ GR++DA+  F    +++LVS+N IV   ++N K  EA +   ++A  GI
Sbjct: 199 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 258

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
                + AS+L   + +  +  G++IH   L+      N  + +AL+ MY  C  +E   
Sbjct: 259 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG-YKSNQCICNALISMYSRCGNIEAAF 317

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VF+ + D+ +  W +MITG+ ++ +   AL +F KM E  G  PN  T  +V+ AC   
Sbjct: 318 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET-GTKPNEITYVAVLSACSHV 376

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALM-DMYSRMGRIEISKTIFDDMEV-RDTVSWNT 457
               + +       K      R    A M D+  R G +  +    + M +  D + W T
Sbjct: 377 GMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 436

Query: 458 M-----ITGYTICGQHGDALMLLRE 477
           +     + G T  G+H   ++L +E
Sbjct: 437 LLGACRVHGNTELGRHAAEMILEQE 461


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 279/753 (37%), Positives = 423/753 (56%), Gaps = 34/753 (4%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD   ++     N ++    R  +   AL  F  +  S       +L  V   C  L 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            R    +G+QVH   ++ G   +  +  +L+ MY K   V+D + +F     +++VSW +
Sbjct: 107 DR---IVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +++   QN    +A+    QM L GIKP+  + A+VL   +    ++ G ++H   +++ 
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            L    FVG+++V+MY     V   + VFD + ++    WN+MI G+  N  D EA  LF
Sbjct: 224 -LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M  + G+    T  ++V+  C   +     + +H   IK G   D  ++ ALM  YS+
Sbjct: 283 YRMR-LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 434 MGRIEISKTIFDDME-VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
              I+ +  +F  M  V++ VSW  +I+GY   G+   A+ L  +M+  E          
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEG--------- 392

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                   +PN  T  +VL  C A +A + +GK+ H+ +I++  +  + V SALV MYAK
Sbjct: 393 -------VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK 445

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            G +  A  VF     R++++WN +I  Y  HG G++ L++ + M     R   ++ + +
Sbjct: 446 RGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM-----RSKNLELDGI 500

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TFI + +AC+H+G+V+EG   F  M  DY I P+ +HY+C+VDL  RAG +E A  LIN 
Sbjct: 501 TFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINK 560

Query: 672 MPPEFDKAGA--WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           MP     AGA  W +LL ACR+H NV++GE+AA+ L  L+P  ++ YVLLSNIY++A  W
Sbjct: 561 MPFP---AGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 617

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
            +   VRK M    V+KE G SWIE  ++   F+AGD SH QS++++  LE LS R++  
Sbjct: 618 QERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA 677

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GY PDT  VLH+V EE KE +L  HSE+LAIAFG++ TPPGT I++ KNLRVC DCH   
Sbjct: 678 GYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVI 737

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K ISKIE R+I++RD  RFHHFK G+CSCGDYW
Sbjct: 738 KLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 157/536 (29%), Positives = 274/536 (51%), Gaps = 28/536 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R++Q +EA+  ++ + RS    D  +   VLK    + D  +GKQ+H   +K G+ +  
Sbjct: 68  SRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGF-VED 126

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V+V  +LV+MY K  S + D  +VFD +  K+ VSW S++A   + G  + AL+ F  M 
Sbjct: 127 VSVGTSLVDMYMKTES-VEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              ++P+ FT  +V      L+    +  G QVH   ++ G +   F+ N+++ MY+K  
Sbjct: 186 LEGIKPNPFTFAAV---LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSL 242

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V DAK +F S E+R+ VSWN++++    N   LEA     +M L G+K      A+V+ 
Sbjct: 243 MVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIK 302

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD-KKI 350
            C++++ +   K++H   ++N    D + + +AL+  Y  C E++   ++F  +   + +
Sbjct: 303 LCANIKEMSFAKQLHCQVIKNGSDFDLN-IKTALMVAYSKCSEIDDAFKLFCMMHGVQNV 361

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIH 409
             W A+I+GY QN   + A+ LF +M    G+ PN  T SSV+ AC    A  ++ +  H
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 421

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             +IK G      V +AL+ MY++ G IE +  +F     RD VSWN+MI+GY    QHG
Sbjct: 422 SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY---AQHG 478

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
                 + ++  EE +++N   +LD          IT + V+  C     + +G+     
Sbjct: 479 CG---KKSLKIFEEMRSKN--LELD---------GITFIGVISACTHAGLVNEGQRYFDL 524

Query: 530 AIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMH 583
            +++  +   +   S +VD+Y++ G L  A  + + MP       W  ++ A  +H
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 253/543 (46%), Gaps = 65/543 (11%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           ++ LF     + L   N ++   S+ND+  EA+     +   G   DG S++ VL  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L     GK++H   ++   + D S VG++LVDMY     VE G RVFD +  K +  W +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVS-VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           ++ GY QN  +E+AL LF +M ++ G+ PN  T ++V+       A      +H   IK 
Sbjct: 164 LLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL    +V N++++MYS+   +  +K +FD ME R+ VSWN+MI G+   G   +A  L 
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M+ +E  K       L +T+           TV+  C  +  ++  K++H   I+N  
Sbjct: 283 YRMR-LEGVK-------LTQTI---------FATVIKLCANIKEMSFAKQLHCQVIKNGS 325

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLK 594
             D+ + +AL+  Y+KC  ++ A ++F +M  V+NV++W  II  Y  +G     + L  
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  E      V+PNE TF ++  AC+      E    F+      G   +    + +V 
Sbjct: 386 QMRREEG----VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVT 441

Query: 655 LLGRAGKVEDAYQLINMMPPEFDK-AGAWSSLLGACRIH---------------QNVE-- 696
           +  + G +E A ++      + D+   +W+S++     H               +N+E  
Sbjct: 442 MYAKRGNIESANEVFK---RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 498

Query: 697 ----IGEIAA----------QNLF-LLEPD-----VASHYVLLSNIYSSAQLWDKAMDVR 736
               IG I+A          Q  F L+  D        HY  + ++YS A + +KAMD+ 
Sbjct: 499 GITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLI 558

Query: 737 KKM 739
            KM
Sbjct: 559 NKM 561



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 207/431 (48%), Gaps = 27/431 (6%)

Query: 44  SWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  SL +  R N   E  L  + +M    I+P+ F F AVL  +A    +  G Q+H  
Sbjct: 160 SWT-SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTM 218

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G   S++ V N++VNMY K    + D   VFD +  ++ VSWNSMIA     G   
Sbjct: 219 VIKSGLD-STIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDL 276

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A E F  M    V+ +     +V   C+N+     +   +Q+H   ++ G +++  I  
Sbjct: 277 EAFELFYRMRLEGVKLTQTIFATVIKLCANIKE---MSFAKQLHCQVIKNGSDFDLNIKT 333

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL-RGI 279
           ALM  Y+K   +DDA  LF      +++VSW  I+S   QN +   A+    QM    G+
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGV 393

Query: 280 KPDGVSIASVLPACSH-LEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVEC 337
           +P+  + +SVL AC+     ++ GK+ H+ ++++     N+  V SALV MY     +E 
Sbjct: 394 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG--FSNALCVSSALVTMYAKRGNIES 451

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              VF    D+ +  WN+MI+GY Q+   +++L +F +M     L  +  T   V+ AC 
Sbjct: 452 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS-KNLELDGITFIGVISACT 510

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYV------QNALMDMYSRMGRIEISKTIFDDMEVRD 451
            +    + +      +K     D ++       + ++D+YSR G +E +  + + M    
Sbjct: 511 HAGLVNEGQRYFDLMVK-----DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPA 565

Query: 452 TVS-WNTMITG 461
             + W T++  
Sbjct: 566 GATIWRTLLAA 576


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/750 (35%), Positives = 406/750 (54%), Gaps = 90/750 (12%)

Query: 198 GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           GLR  R++  + + +   N F  N+L++M+AK GR+ DA+ +F    +RD VSW  +V  
Sbjct: 80  GLRDARRLF-DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L++  +F EA+  L  M   G  P   ++ +VL +C+  +    G+++H++ ++   L  
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGS 197

Query: 318 NSFVGSALVDMYCNCREVECGRRVFD-------------------------------FIS 346
              V +++++MY  C + E    VF+                                + 
Sbjct: 198 CVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           D+ I  WNAMI GY QN  D +AL LF +M   + + P+  T++SV+ AC         +
Sbjct: 258 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD--------------------- 445
            +H + ++  +  +  V NAL+  Y++ G +E ++ I D                     
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377

Query: 446 --DMEV----------RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             DME           RD V+W  MI GY   G++ +A+ L R M               
Sbjct: 378 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM--------------- 422

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                 P+PNS TL  VL  C +L+ L  GK+IH  AIR++L     V +A++ MYA+ G
Sbjct: 423 --ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSG 480

Query: 554 CLNFARRVFDLMPVRN-VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
              +ARR+FD +  R   ITW  +I+A   HG+G+E + L + M+  G     V+P+ +T
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG-----VEPDRIT 535

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           ++ + +ACSH+G V+EG   + ++K+++ I P   HYAC+VDLL RAG   +A + I  M
Sbjct: 536 YVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM 595

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E D A AW SLL ACR+H+N E+ E+AA+ L  ++P+ +  Y  ++N+YS+   W  A
Sbjct: 596 PVEPD-AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             + K  KE  VRKE G SW     +IH F A D  H Q + ++     + E ++  G+V
Sbjct: 655 ARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFV 714

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           PD   VLH+V++E KE LL  HSEKLAIAFG+++TP  TT+RV KNLRVCNDCH A K I
Sbjct: 715 PDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAI 774

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SK+  REII+RD  RFHHF++G CSC DYW
Sbjct: 775 SKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 252/546 (46%), Gaps = 95/546 (17%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+L++M+ K G  + D   VF  + E+D VSW  M+  L R G++  A++    M     
Sbjct: 102 NSLLSMFAKSGR-LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAK------ 229
            P+ FTL +V  +C+         +GR+VH   +++G  +   + N+++ MY K      
Sbjct: 161 TPTQFTLTNVLSSCAVT---QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSET 217

Query: 230 -------------------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
                                    LGR+D A++LF+S  DR +VSWN +++  +QN   
Sbjct: 218 ATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLD 277

Query: 265 LEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
            +A+ +F R +    + PD  +I SVL AC++L  +  GK++HAY LR ++   NS V +
Sbjct: 278 AKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY-NSQVTN 336

Query: 324 ALVDMYCNCREVECGRRVFD---------------------------------FISDKKI 350
           AL+  Y     VE  RR+ D                                  ++++ +
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W AMI GY QN  ++EA+ LF  M    G  PN+ T+++V+  C         + IH 
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
            AI+  L +   V NA++ MY+R G    ++ +FD +  R +T++W +MI      GQ  
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +A+ L  EM     E                 P+ IT + VL  C     + +GK  +  
Sbjct: 516 EAVGLFEEMLRAGVE-----------------PDRITYVGVLSACSHAGFVNEGKRYYD- 557

Query: 530 AIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEG 586
            I+N   +A ++   + +VD+ A+ G  + A+     MPV  + I W  ++ A  +H + 
Sbjct: 558 QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH-KN 616

Query: 587 QEVLEL 592
            E+ EL
Sbjct: 617 AELAEL 622



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 86/512 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+ +F EAI + ++MT     P  F    VL + A  Q  ++G+++H+ V
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 190

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G G S V VAN+++NMYGKCG D      VF+R+  +   SWN+M++     G+ DL
Sbjct: 191 VKLGLG-SCVPVANSVLNMYGKCG-DSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDL 248

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A   F                                RM+  S++ P  FT+ SV  AC+
Sbjct: 249 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD--------------- 235
           NL     +R+G+QVH   LR    +N+ + NAL++ YAK G V++               
Sbjct: 309 NLG---NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNV 365

Query: 236 ------------------AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                             A+ +F    +RD+V+W  ++    QN +  EA+   R M   
Sbjct: 366 ISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITC 425

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A+VL  C+ L  LD GK+IH  A+R+ +L  +S V +A++ MY        
Sbjct: 426 GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQSSSVSNAIITMYARSGSFPW 484

Query: 338 GRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            RR+FD +  +K  + W +MI    Q+   EEA+ LF +M   AG+ P+  T   V+ AC
Sbjct: 485 ARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR-AGVEPDRITYVGVLSAC 543

Query: 397 VRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
             +  F ++   +   IK    +  +      ++D+ +R G    ++     M V  D +
Sbjct: 544 SHA-GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +W ++++    C  H +A     E+  +  EK
Sbjct: 603 AWGSLLSA---CRVHKNA-----ELAELAAEK 626


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/704 (36%), Positives = 408/704 (57%), Gaps = 66/704 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N +  N +++ Y+KLGRV + + LF +   RD VSWN+++S  +      ++V     M 
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM- 132

Query: 276 LRGIKPDG------VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
              +K DG      ++ +++L   S    +  G++IH + ++   +    FVGS LVDMY
Sbjct: 133 ---LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFM-SYVFVGSPLVDMY 188

Query: 330 CNCREVECGRRVFDFISDKKIAL-------------------------------WNAMIT 358
                + C R+VFD + +K + +                               W +MIT
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMIT 248

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           G+ QN  D +A+ +F +M+ +  L  +  T  SV+ AC    A  + + +H + I+    
Sbjct: 249 GFTQNGLDRDAIDIFREMK-LENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            + +V +AL+DMY +   I+ ++ +F  M  ++ VSW  M+ GY   G   +A+    +M
Sbjct: 308 DNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q    E                 P+  TL +V+  C  L++L +G + HA A+ + L + 
Sbjct: 368 QKYGIE-----------------PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISF 410

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + V +ALV +Y KCG +  + R+F+ +  ++ +TW  ++  Y   G+  E + L ++M+A
Sbjct: 411 ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLA 470

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     +KP++VTFI + +ACS +G+V +G  +F  M +++GI P  DHY C++DL  R
Sbjct: 471 HG-----LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSR 525

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG++E+A   IN MP   D A +W++LL +CR + N++IG+ AA+ L  L+P   + YVL
Sbjct: 526 AGRIEEARNFINKMPFSPD-AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVL 584

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LS++Y++   W++   +RK M++ G+RKEPGCSWI++ +++H F A D S+  S+Q++  
Sbjct: 585 LSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSE 644

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           LE L+ +M KEGYVPD + VLH+V + EK  +L  HSEKLAIAFG+L  PPG  IRV KN
Sbjct: 645 LEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKN 704

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC+DCH ATK+ISKI +REI++RD  RFH FK+GTCSCGD+W
Sbjct: 705 LRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 171/641 (26%), Positives = 298/641 (46%), Gaps = 112/641 (17%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKY--------------GYG-LSSVTVA-------- 116
           + A+LK      + +  K +H+H++K                Y  L S+  A        
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 117 -------NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                  NT+++ Y K G  + ++  +FD +  +D VSWNS+I+     G    +++A+ 
Sbjct: 72  HPNLYSWNTILSAYSKLGR-VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 170 MMLYSNVEPSSFTLVSVALACSNL--SRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAM 226
           +ML ++    SF L  +  +   +  S+R  ++LGRQ+HG+ ++ G  +  F+ + L+ M
Sbjct: 131 LMLKND---GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 227 YAKL-------------------------------GRVDDAKTLFKSFEDRDLVSWNTIV 255
           Y+K+                               GRV+D+K LF    +RD +SW +++
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           +  +QN    +A+   R+M L  ++ D  +  SVL AC  +  L  GK++HAY +R D  
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-Y 306

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            DN FV SALVDMYC C+ ++    VF  ++ K +  W AM+ GYGQN Y EEA+  F  
Sbjct: 307 KDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M++  G+ P+  T+ SV+ +C    +  +    H  A+  GL     V NAL+ +Y + G
Sbjct: 367 MQKY-GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            IE S  +F+++  +D V+W  +++GY   G+  + + L   M            + L  
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML----------AHGL-- 473

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYA 550
                KP+ +T + VL  C     + KG +I      +M+    +V      + ++D+++
Sbjct: 474 -----KPDKVTFIGVLSACSRAGLVEKGNQI----FESMINEHGIVPIQDHYTCMIDLFS 524

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVIIMA---YGMHGEGQEVLELLKNMVAEGSRGGEV 606
           + G +  AR   + MP   + I+W  ++ +   YG    G+   E L           E+
Sbjct: 525 RAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM----------EL 574

Query: 607 KP-NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            P N  +++ L +  +  G   E   L   M+D  G+   P
Sbjct: 575 DPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK-GLRKEP 614



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 153/301 (50%), Gaps = 6/301 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++   R+AI  + EM   ++Q D + F +VL A  G+  L  GKQ+HA++
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y   ++ VA+ LV+MY KC  ++     VF ++T K+ VSW +M+    + G  + 
Sbjct: 302 IRTDYK-DNIFVASALVDMYCKC-KNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEE 359

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A++ F  M    +EP  FTL SV  +C+NL+    L  G Q H  +L  G  +   + NA
Sbjct: 360 AVKTFSDMQKYGIEPDDFTLGSVISSCANLA---SLEEGAQFHARALTSGLISFITVSNA 416

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++D+  LF     +D V+W  +VS  +Q  K  E +     M   G+KPD
Sbjct: 417 LVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+   VL ACS   +++ G +I    +    ++      + ++D++     +E  R   
Sbjct: 477 KVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 536

Query: 343 D 343
           +
Sbjct: 537 N 537



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 20/227 (8%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK   SW   L    ++    EA+ ++ +M +  I+PD+F   +V+ + A +  L  G Q
Sbjct: 338 CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQ 397

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            HA  +  G  +S +TV+N LV +YGKCGS + D +++F+ I+ KD+V+W ++++   +F
Sbjct: 398 FHARALTSGL-ISFITVSNALVTLYGKCGS-IEDSHRLFNEISFKDEVTWTALVSGYAQF 455

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           GK +  +  F  ML   ++P   T + V  ACS        R G    GN +     N  
Sbjct: 456 GKANETIGLFESMLAHGLKPDKVTFIGVLSACS--------RAGLVEKGNQIFESMINEH 507

Query: 219 IM-------NALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
            +         ++ ++++ GR+++A+          D +SW T++SS
Sbjct: 508 GIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSS 554


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/660 (40%), Positives = 379/660 (57%), Gaps = 59/660 (8%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           LM  YA  G     + +F    D+++V +N ++ S   N  + +A++  + MA +G  PD
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +   VL ACS    L  G +IH   ++  + + N ++G+ LV MY  C+ ++  RRV 
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDM-NLYIGNGLVSMYGKCKWLDAARRVL 195

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  + +  WN+M+ GY QN    +AL L  +ME++  L P+A TM S++PA       
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLK-LKPDAGTMGSLLPA------- 247

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                               V N   D       +   K +F  ++ +  +SWN MI  Y
Sbjct: 248 --------------------VTNTSCD------NVLYVKDMFVKLKEKSLISWNVMIAVY 281

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                  +A+ L  +MQ                 V   +P+++++ +VLP CG LSA   
Sbjct: 282 VNNAMPNEAVDLYLQMQ-----------------VHGVEPDAVSISSVLPACGDLSAAVL 324

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ IH Y  R  L  ++++ +AL+DMYAKCGCL  AR VFD M  R+V++W  +I AYGM
Sbjct: 325 GRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGM 384

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            G+G++ + L K M     R     P+ + F+++ AACSH+G+V EG   F  M  +YGI
Sbjct: 385 SGQGKDAVALFKKM-----RDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGI 438

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P  +HY C+VDLLGRAGK+++AY L   MP E ++   W SLL ACR++ ++ I  +AA
Sbjct: 439 TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNER-VWGSLLSACRVYSSMNIALLAA 497

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            +LF L P+ + +YVLLSNIY+ A  W     VR  M   G++K PG S +E  D ++ F
Sbjct: 498 DHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTF 557

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           LAGD SH QS++++  L  L  RM++ GY+P+T   LH+V EE+KE  L  HSEKLAI F
Sbjct: 558 LAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVF 617

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ILNT PG+TIR+ KN+RVC DCH ATK ISKI  REII+RD  RFHHF++G CSCGDYW
Sbjct: 618 AILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 224/467 (47%), Gaps = 66/467 (14%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L+  Y  CG   +  + +FD IT+K+ V +N MI +    G +  AL  F+ M      P
Sbjct: 77  LMRAYAACGEPCYTRH-IFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP 135

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
            ++T   V  ACS       L +G Q+HG  +++G + N +I N L++MY K   +D A+
Sbjct: 136 DNYTYPCVLKACS---VSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAAR 192

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +      RD+VSWN++V+  +QN +F +A+   R+M    +KPD  ++ S+LPA ++  
Sbjct: 193 RVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN-- 250

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
                                            +C  V   + +F  + +K +  WN MI
Sbjct: 251 --------------------------------TSCDNVLYVKDMFVKLKEKSLISWNVMI 278

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
             Y  N    EA+ L+++M +V G+ P+A ++SSV+PAC    A      IH +  +  L
Sbjct: 279 AVYVNNAMPNEAVDLYLQM-QVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKL 337

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             +  ++NAL+DMY++ G ++ ++ +FD M  RD VSW +MI+ Y + GQ  DA+ L ++
Sbjct: 338 RPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKK 397

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M        R++ +          P+ I  ++VL  C     + +G+    Y    M   
Sbjct: 398 M--------RDSGF---------TPDWIAFVSVLAACSHAGLVDEGR----YCFNLMAEY 436

Query: 538 DVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
            +  G    + +VD+  + G ++ A  +   MP+  N   W  ++ A
Sbjct: 437 GITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 213/445 (47%), Gaps = 52/445 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +  +++A+L +  M      PDN+ +P VLKA +   +L +G QIH  VVK G 
Sbjct: 109 IRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGL 168

Query: 109 GLSSVTVANTLVNMYGKCGSDMW--DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
            ++ + + N LV+MYGKC    W     +V D +  +D VSWNSM+A   + G+++ AL+
Sbjct: 169 DMN-LYIGNGLVSMYGKCK---WLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALK 224

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
             R M    ++P + T+ S+  A +N S  + L +                         
Sbjct: 225 LCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYV------------------------- 259

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
                     K +F   +++ L+SWN +++    N    EAV    QM + G++PD VSI
Sbjct: 260 ----------KDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSI 309

Query: 287 ASVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
           +SVLPAC  L     G+ IH Y     LR ++L++N     AL+DMY  C  ++  R VF
Sbjct: 310 SSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLEN-----ALIDMYAKCGCLKEARAVF 364

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  + +  W +MI+ YG +   ++A+ LF KM + +G  P+     SV+ AC  +   
Sbjct: 365 DQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRD-SGFTPDWIAFVSVLAACSHAGLV 423

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            +         + G+       N ++D+  R G+I+ +  +   M +  +   W ++++ 
Sbjct: 424 DEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483

Query: 462 YTICGQHGDALMLLREMQNMEEEKN 486
             +      AL+    +  +  E++
Sbjct: 484 CRVYSSMNIALLAADHLFQLAPEQS 508


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/699 (39%), Positives = 394/699 (56%), Gaps = 36/699 (5%)

Query: 195 RRDGLRLGRQVHGNSLRVGEWNT--------FIMNALMAMYAKLGRVDDAKTLFK--SFE 244
           RR  LR   Q+H   L+ G   T            AL A       +  A  LF+     
Sbjct: 72  RRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHP 131

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            R   S+N ++ S  +     +A+ +F+  +    + PD  ++A+ + +CS +  L  G+
Sbjct: 132 PRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGR 191

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
            + AYA +   ++D  FV ++L+ MY +C +V     +F  +  K +  WNAMI GY +N
Sbjct: 192 GVQAYAFKRGFMVDQ-FVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              +E + +F  M EV   + +  T+ SV  AC R       + I  +A + G+ R R +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPF-DEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
             AL+DMY++ G ++ ++ +FD M  RD V+W+ MI+GYT   +  +AL +  EMQ  E 
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                             PN +T+++VL  C  L AL  GK +H+Y  R  L   V++G+
Sbjct: 370 -----------------NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT 412

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           ALVD YAKCGC+  A + F+ MPVRN  TW  +I     +G  +E LEL  +M+      
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLE----- 467

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             ++P +VTFI +  ACSH  +V EG   F  M  DYGI P  +HY C+VDLLGRAG ++
Sbjct: 468 ANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLID 527

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +AYQ I  MP E   A  W +LL AC +H+NVEIGE A + +  L+P  + +Y+LLSN Y
Sbjct: 528 EAYQFIRNMPIE-PNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTY 586

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           +S   W  A  VRK+MKE GV K PGCS IE    I +F A D  H Q  +++  +  + 
Sbjct: 587 ASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMI 646

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
           E ++  GY+P+T+    +V+E EK+  +  HSEKLAIAFG++ + PG TIR++KNLRVC 
Sbjct: 647 ENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCI 706

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH ATK ISK+ +REII+RD  RFHHFK+G CSC DYW
Sbjct: 707 DCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 217/431 (50%), Gaps = 15/431 (3%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           R   S+   +RS  R+    +A+  ++EM   + + PD       +K+ + + DLS+G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           + A+  K G+ +    V N+L++MY  CG D+   + +F  +  K  ++WN+MIA   + 
Sbjct: 193 VQAYAFKRGFMVDQF-VLNSLIHMYASCG-DVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G W   +E F+ ML         TL+SVA AC  L   +   LG+ +   +   G   + 
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDAN---LGQWIAEYAEEKGMLRSR 307

Query: 219 -IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            +  AL+ MYAK G +D A+ LF     RD+V+W+ ++S  +Q+D+  EA+    +M   
Sbjct: 308 NLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            + P+ V++ SVL AC+ L  L+TGK +H+Y  R D+ +    +G+ALVD Y  C  ++ 
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPL-TVILGTALVDFYAKCGCIKD 426

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             + F+ +  +    W A+I G   N    EAL LF  M E A + P   T   V+ AC 
Sbjct: 427 AVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLE-ANIEPTDVTFIGVLLAC- 484

Query: 398 RSEAFPDKEG-IHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
            S     +EG  H  ++    G    +++   ++D+  R G I+ +     +M +  + V
Sbjct: 485 -SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAV 543

Query: 454 SWNTMITGYTI 464
            W  +++  T+
Sbjct: 544 VWRALLSACTV 554


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/734 (36%), Positives = 405/734 (55%), Gaps = 97/734 (13%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F  N +++ Y+K G +D     F     RD VSW T++       ++ +A+  +  M   
Sbjct: 81  FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCR 333
           GI+P   ++ +VL + +    ++TGK++H++     LR ++ + NS     L++MY  C 
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS-----LLNMYAKCG 195

Query: 334 EVECGRRVFDFI-------------------------------SDKKIALWNAMITGYGQ 362
           +    + VFD +                               +++ I  WN+MI+G+ Q
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
             YD  AL +F KM   + L P+  T++SV+ AC   E     + IH H +  G      
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315

Query: 423 VQNALMDMYSRMGRIEI---------------------------------SKTIFDDMEV 449
           V NAL+ MYSR G +E                                  +K IF  ++ 
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD V+W  MI GY   G +G+A+ L R M    +                 +PNS TL  
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-----------------RPNSYTLAA 418

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-R 568
           +L    +L++L+ GK+IH  A+++     V V +AL+ MYAK G +  A R FDL+   R
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + ++W  +I+A   HG  +E LEL + M+ EG R     P+ +T++ +F+AC+H+G+V++
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLR-----PDHITYVGVFSACTHAGLVNQ 533

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   F  MKD   I P+  HYAC+VDL GRAG +++A + I  MP E D    W SLL A
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLLSA 592

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR+H+N+++G++AA+ L LLEP+ +  Y  L+N+YS+   W++A  +RK MK+  V+KE 
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE   ++H F   DG+H +  +++  ++ + + ++K GYVPDT+ VLH++ EE KE
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
            +L  HSEKLAIAFG+++TP  TT+R+ KNLRVCNDCH A KFISK+  REII+RD  RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+G CSC DYW
Sbjct: 773 HHFKDGFCSCRDYW 786



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 270/619 (43%), Gaps = 112/619 (18%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  +HA  +     L +    NT+++ Y K G DM    + FD++ ++D VSW +MI   
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYSKRG-DMDSTCEFFDQLPQRDSVSWTTMIVGY 121

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G++  A+     M+   +EP+ FTL +V LA    +R   +  G++VH   +++G  
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV-LASVAATR--CMETGKKVHSFIVKLGLR 178

Query: 215 WNTFIMNALMAMYAK-------------------------------LGRVDDAKTLFKSF 243
            N  + N+L+ MYAK                               +G++D A   F+  
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            +RD+V+WN+++S  +Q    L A+ +F + +    + PD  ++ASVL AC++LE L  G
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR---------------------- 340
           K+IH++ +     I +  V +AL+ MY  C  VE  RR                      
Sbjct: 299 KQIHSHIVTTGFDI-SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357

Query: 341 -----------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                      +F  + D+ +  W AMI GY Q+    EA+ LF  M    G  PN+ T+
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTL 416

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           ++++       +    + IHG A+K G      V NAL+ MY++ G I  +   FD +  
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476

Query: 450 -RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            RDTVSW +MI       QHG A   L   + M  E  R              P+ IT +
Sbjct: 477 ERDTVSWTSMIIA---LAQHGHAEEALELFETMLMEGLR--------------PDHITYV 519

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFD 563
            V   C     + +G++        M   D ++ +      +VD++ + G L  A+   +
Sbjct: 520 GVFSACTHAGLVNQGRQY----FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575

Query: 564 LMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            MP+  +V+TW  ++ A  +H     G+   E L  +  E S       N      L++A
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN------LYSA 629

Query: 620 CSHSGMVSEGMDLFYKMKD 638
           C   G   E   +   MKD
Sbjct: 630 C---GKWEEAAKIRKSMKD 645



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 229/500 (45%), Gaps = 102/500 (20%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       Q+ +AI    +M +  I+P  F    VL +VA  + +  GK++H+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G    +V+V+N+L+NMY KCG  M   + VFDR+  +D  SWN+MIA   + G+ DL
Sbjct: 173 VKLGL-RGNVSVSNSLLNMYAKCGDPMMAKF-VFDRMVVRDISSWNAMIALHMQVGQMDL 230

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A+  F                                +M+  S + P  FTL SV  AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA---------------------- 228
           NL +   L +G+Q+H + +  G + +  ++NAL++MY+                      
Sbjct: 291 NLEK---LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347

Query: 229 -----------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                      KLG ++ AK +F S +DRD+V+W  ++    Q+  + EA+   R M   
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A++L   S L  L  GK+IH  A+++  +   S V +AL+ MY     +  
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGNITS 466

Query: 338 GRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R FD I  ++    W +MI    Q+ + EEAL LF  M  + GL P+  T   V  AC
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-LMEGLRPDHITYVGVFSAC 525

Query: 397 VRSEAFPDKEGIHGHAIKLGLGR---------DRYVQN-----ALMDMYSRMGRIEISKT 442
                         HA  +  GR         D+ +        ++D++ R G ++ ++ 
Sbjct: 526 T-------------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 443 IFDDMEVR-DTVSWNTMITG 461
             + M +  D V+W ++++ 
Sbjct: 573 FIEKMPIEPDVVTWGSLLSA 592



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 78/361 (21%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   IK GL    Y+ N LM++YS+ G    ++ +FD+M +R   SWNT+++ Y+  G 
Sbjct: 36  VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95

Query: 468 HGDALMLLREMQNMEE---------EKNRNNVYDL-----DETVLRPKPNSITLMTVLPG 513
                    ++   +           KN    +       D      +P   TL  VL  
Sbjct: 96  MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV------ 567
             A   +  GK++H++ ++  L  +V V ++L++MYAKCG    A+ VFD M V      
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215

Query: 568 -------------------------RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
                                    R+++TWN +I  +   G     L++   M+    R
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML----R 271

Query: 603 GGEVKPNEVTFIALFAACS-----------HSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
              + P+  T  ++ +AC+           HS +V+ G D+        GI  +      
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI-------SGIVLNA----- 319

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLFLLEP 710
           ++ +  R G VE A +LI     +  K   +++LL        +++G++  A+N+F+   
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG-----YIKLGDMNQAKNIFVSLK 374

Query: 711 D 711
           D
Sbjct: 375 D 375



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 54/315 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +   + EAI  +  M     +P+++   A+L   + +  LS GKQIH   
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWD 162
           VK G  + SV+V+N L+ MY K G ++    + FD I  E+D VSW SMI  L + G  +
Sbjct: 440 VKSG-EIYSVSVSNALITMYAKAG-NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            ALE F  ML   + P   T V V  AC++                              
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTH------------------------------ 527

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRD-----LVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                   G V+  +  F   +D D     L  +  +V    +     EA  F+ +M   
Sbjct: 528 -------AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP-- 578

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI--DNSFVGSALVDMYCNCREV 335
            I+PD V+  S+L AC   + +D GK     A    +L+  +NS   SAL ++Y  C + 
Sbjct: 579 -IEPDVVTWGSLLSACRVHKNIDLGK----VAAERLLLLEPENSGAYSALANLYSACGKW 633

Query: 336 ECGRRVFDFISDKKI 350
           E   ++   + D ++
Sbjct: 634 EEAAKIRKSMKDGRV 648



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 502 PNSITLMTVLPGCGALSALAKGKE--------IHAYAIRNMLATDVVVGSALVDMYAKCG 553
           P  ++L T+L  C  L   +  K         +H   I++ L   V + + L+++Y+K G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
               AR++FD MP+R   +WN ++ AY   G+     E    +
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/697 (36%), Positives = 411/697 (58%), Gaps = 25/697 (3%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYA---KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H  ++  G  +  I+ A +  +    +LG ++ A+ +F +    +   WN ++   S
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +      AV    +M  RG+ PD  +   +L   +    +  G+E+H + ++      N 
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG-FSSNV 154

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           FV +AL+ +Y    EV   R VFD  S   +  WN MI+GY +++  +E++ LF +ME +
Sbjct: 155 FVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERM 214

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             L P++ T+ SV+ AC + +     + +H +   L +   R ++NAL+DMY+  G ++ 
Sbjct: 215 RVL-PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDT 273

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN--------MEEEKNRNNVY 491
           +  IFD+M+ RD +SW  ++TG+T  GQ G A     +M          M +   + N +
Sbjct: 274 ALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRF 333

Query: 492 DLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
               ++ R       KP+  T++++L  C  L AL  G+ I AY  +N +  D  VG+AL
Sbjct: 334 KEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNAL 393

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           +DMY  CG +  A R+F+ MP R+ I+W  +I    ++G G+E L++   M+        
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK-----AS 448

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + P+EVT I +  AC+HSGMV +G   F +M   +GIEP+  HY C+VDLLGRAG +++A
Sbjct: 449 ITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEA 508

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
           +++I  MP + +    W SLLGACR+H++ E+ E+AAQ +  LEP+  + YVLL NIY++
Sbjct: 509 HEVIKNMPVKPNSI-VWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAA 567

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
              W+K  +VRK M + G++K PGCS IE    +H+F+AGD  H QS++++  L+ +S  
Sbjct: 568 CNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVD 627

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           ++  GY PDTS V  ++ EEEKE+ +  HSEKLAIAFG++++ PG TIR+ KNLR+C DC
Sbjct: 628 LKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDC 687

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H   K +SK+ +RE+I+RD  RFHHF++G+CSC DYW
Sbjct: 688 HYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 239/485 (49%), Gaps = 47/485 (9%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++  +R      A+  Y EM    + PD + +P +LK       +  G+++H H+V
Sbjct: 87  WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIV 146

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+  S+V V N L+++Y   G ++     VFDR ++ D V+WN MI+   R  ++D +
Sbjct: 147 KLGFS-SNVFVQNALIHLYSLSG-EVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDES 204

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNA 222
           ++ F  M    V PSS TLVSV  ACS L     L +G++VH     L++ E    + NA
Sbjct: 205 MKLFDEMERMRVLPSSITLVSVLSACSKLK---DLNVGKRVHRYVKDLKI-EPVRVLENA 260

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS----------------------- 259
           L+ MYA  G +D A  +F + + RD++SW  IV+  +                       
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSW 320

Query: 260 --------QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
                   Q ++F E +   R+M    IKPD  ++ S+L AC+HL  L+ G+ I AY  +
Sbjct: 321 TAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDK 380

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N+I ID SFVG+AL+DMY NC  VE   R+F+ +  +    W A+I G   N Y EEAL 
Sbjct: 381 NEIKID-SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALD 439

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDM 430
           +F +M + A + P+  T   V+ AC  S      K+       + G+  +      ++D+
Sbjct: 440 MFSQMLK-ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALML-LREMQNMEEEKNRN 488
             R G ++ +  +  +M V+ +++ W +++     C  H D  M  +   Q +E E    
Sbjct: 499 LGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGA---CRVHRDEEMAEMAAQQILELEPENG 555

Query: 489 NVYDL 493
            VY L
Sbjct: 556 AVYVL 560



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 271/599 (45%), Gaps = 67/599 (11%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L  +   + ++  KQIH+  +  G   + +  A  +         DM     VFD +   
Sbjct: 23  LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           +   WN+MI    R G  + A+  +  ML   V P  +T           +R   ++ GR
Sbjct: 83  NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTY---PFLLKRFTRDTAVKCGR 139

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           ++H + +++G   N F+ NAL+ +Y+  G V  A+ +F      D+V+WN ++S  +++ 
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSK 199

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV- 321
           +F E++    +M    + P  +++ SVL ACS L+ L+ GK +H Y    D+ I+   V 
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV--KDLKIEPVRVL 257

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY--------GQNEYD------- 366
            +AL+DMY  C +++    +FD +  + +  W A++TG+         +N +D       
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317

Query: 367 ----------------EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
                           +E L LF +M + A + P+  TM S++ AC    A    E I  
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREM-QAANIKPDEFTMVSILTACAHLGALELGEWIKA 376

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +  K  +  D +V NAL+DMY   G +E +  IF+ M  RD +SW  +I G  I G   +
Sbjct: 377 YIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEE 436

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA-Y 529
           AL +  +M              L  ++    P+ +T + VL  C     + KGK+  A  
Sbjct: 437 ALDMFSQM--------------LKASI---TPDEVTCIGVLCACTHSGMVDKGKKFFARM 479

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQE 588
             ++ +  +V     +VD+  + G L  A  V   MPV+ N I W  ++ A  +H + +E
Sbjct: 480 TTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRD-EE 538

Query: 589 VLELLKNMVAE-GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           + E+    + E     G V    V    ++AAC+      E +    K+  D GI+ +P
Sbjct: 539 MAEMAAQQILELEPENGAVY---VLLCNIYAACNR----WEKLHEVRKLMMDRGIKKTP 590



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 41/298 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    RS QF E++  + EM R  + P +    +VL A + ++DL++GK++H +V
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-----DMWDVYK----------------------- 135
                    V + N L++MY  CG       ++D  K                       
Sbjct: 247 KDLKIEPVRV-LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLA 305

Query: 136 --VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
              FD++ E+D VSW +MI    +  ++   L  FR M  +N++P  FT+VS+  AC++L
Sbjct: 306 RNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHL 365

Query: 194 SRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                L LG  +      N +++   ++F+ NAL+ MY   G V+ A  +F +   RD +
Sbjct: 366 G---ALELGEWIKAYIDKNEIKI---DSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKI 419

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           SW  ++  L+ N    EA+    QM    I PD V+   VL AC+H  M+D GK+  A
Sbjct: 420 SWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFA 477


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/843 (32%), Positives = 456/843 (54%), Gaps = 35/843 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + S + +   +E I +Y  M    I  +      V+ +   + D+ LG Q+  H 
Sbjct: 127 SWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHA 186

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G   + V+ AN+L+ M+G CG D+ +   +F+ + E+D +SWNS+I+      +  L
Sbjct: 187 LKFGLE-TKVSAANSLIFMFGGCG-DINEACSIFNEMNERDTISWNSIISA---NAQNTL 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             E+FR   +  +        ++++  S     D L+ G+ VHG +++ G E N  + N 
Sbjct: 242 HEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNT 301

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+++Y+  GR  DA+ +F+   +RDL+SWN++++   Q+ + L A+    +M     + +
Sbjct: 302 LLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEIN 361

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  S L AC   E    GK +H + +    L D   +G+ L+  Y  C ++   ++VF
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLG-LQDELIIGNTLITFYGKCHKMAEAKKVF 420

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +       WNA+I G+  N    EA+  F  M E +    +  T+ +++ +C+  E  
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480

Query: 403 PDKEGI--HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
             K GI  H H +  G   D++VQ++L+ MY++ G +  S  IFD +  + +  WN +I 
Sbjct: 481 I-KYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIA 539

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G   +AL L+  M++   E ++ N                   T L     L+ L
Sbjct: 540 ANARYGFGEEALKLVVRMRSAGIEFDQFN-----------------FSTALSVAADLAML 582

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            +G+++H   I+     D  + +A +DMY KCG L+ A R+      R+ ++WN +I   
Sbjct: 583 EEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIS 642

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG+  +  E   +M+  G     VKPN V+F+ L +ACSH G+V EG+  +  M   Y
Sbjct: 643 ARHGQFHKAKETFHDMLKLG-----VKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVY 697

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQNVEIGE 699
           GI+P  +H  C++DLLGR+G++ +A   I  MP P  D    W SLL +CRI++N+++G 
Sbjct: 698 GIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLV--WRSLLASCRIYRNLDLGR 755

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
            AA++L  L+P   S YVL SN++++   W+   DVR +M    ++K+P  SW+++   I
Sbjct: 756 KAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNI 815

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
             F  GD +H Q EQ++G L  L + + + GYVPDTS  L + +EE+KE  +  HSE++A
Sbjct: 816 SIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIA 875

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           +AFG++N P G+T+R+ KNLRVC DCH   KF+S +  R+I+LRD  RFHHF NG CSC 
Sbjct: 876 LAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCS 935

Query: 880 DYW 882
           DYW
Sbjct: 936 DYW 938



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 276/561 (49%), Gaps = 42/561 (7%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNL 193
           VFDR++E+++ SWN M++   R G +  A+  FR +    ++PS F + S+  AC  S++
Sbjct: 14  VFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSI 73

Query: 194 SRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
             ++G     Q HG +++ G  ++ F+  + +  YA  G V +A+ +F    DR++VSW 
Sbjct: 74  MAKEGF----QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWT 129

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++ S S N    E +   ++M   GI  +  +IA V+ +C  L  +  G ++  +AL+ 
Sbjct: 130 SLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKF 189

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            +    S   ++L+ M+  C ++     +F+ ++++    WN++I+   QN   EE+   
Sbjct: 190 GLETKVS-AANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRY 248

Query: 373 FIKM----EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           F  M    EE+     N TT+S ++  C   +     +G+HG A+K GL  +  + N L+
Sbjct: 249 FHWMRLVHEEI-----NYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLL 303

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            +YS  GR + ++ IF  M  RD +SWN+M+  Y   G+   AL +  EM  M++E    
Sbjct: 304 SVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE---- 359

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                         N +T  + L  C        GK +H + +   L  ++++G+ L+  
Sbjct: 360 -------------INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITF 406

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y KC  +  A++VF  MP  + +TWN +I  +  + E  E +   K ++ EGS  G    
Sbjct: 407 YGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFK-LMREGSTSG---V 462

Query: 609 NEVTFIALFAAC-SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           + +T + +  +C +H  ++  G+ + +      G +      + ++ +  + G +  +  
Sbjct: 463 DYITIVNILGSCLTHEDLIKYGIPI-HAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSY 521

Query: 668 LINMMPPEFDKAGAWSSLLGA 688
           + + +   F  +  W++++ A
Sbjct: 522 IFDQLV--FKTSSVWNAIIAA 540



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/693 (24%), Positives = 323/693 (46%), Gaps = 50/693 (7%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL-GKQ 98
           R + SW   +    R   + EA+L + ++    I+P  F   +++ A      ++  G Q
Sbjct: 21  RNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKEGFQ 80

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H   +K G  +  V V  + V+ Y   G  + +  K+F+ + +++ VSW S++ +    
Sbjct: 81  FHGFAIKCGL-IYDVFVGTSFVHFYASYGI-VSNAQKMFNEMPDRNVVSWTSLMVSYSDN 138

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G     +  ++ M +  +  +   +  V  +C  L     + LG Q+ G++L+ G E   
Sbjct: 139 GSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMD---IILGHQLLGHALKFGLETKV 195

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
              N+L+ M+   G +++A ++F    +RD +SWN+I+S+ +QN    E+  +   M L 
Sbjct: 196 SAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLV 255

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             + +  +++ +L  C  ++ L  GK +H  A++   L  N  + + L+ +Y +    + 
Sbjct: 256 HEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYG-LESNICLCNTLLSVYSDAGRSKD 314

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW----PNATTMSSVV 393
              +F  + ++ +  WN+M+  Y Q+     AL +F +M     LW     N  T +S +
Sbjct: 315 AELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM-----LWMKKEINYVTFTSAL 369

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC+  E F + + +HG  + LGL  +  + N L+  Y +  ++  +K +F  M   D V
Sbjct: 370 AACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKV 429

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WN +I G+    +  +A+   + M+    E + + V            + IT++ +L  
Sbjct: 430 TWNALIGGFANNAELNEAVAAFKLMR----EGSTSGV------------DYITIVNILGS 473

Query: 514 CGALSALAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           C     L K G  IHA+ +      D  V S+L+ MYAKCG L+ +  +FD +  +    
Sbjct: 474 CLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSV 533

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN II A   +G G+E L+L+  M     R   ++ ++  F    +  +   M+ EG  L
Sbjct: 534 WNAIIAANARYGFGEEALKLVVRM-----RSAGIEFDQFNFSTALSVAADLAMLEEGQQL 588

Query: 633 FYKMKDDYGIEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGAC 689
            +      G E   DH+     +D+ G+ G+++DA   + ++P   D++  +W++L+   
Sbjct: 589 -HGSTIKLGFE--LDHFIINAAMDMYGKCGELDDA---LRILPQPTDRSRLSWNTLISIS 642

Query: 690 RIHQNVEIGEIAAQNLFLL--EPDVASHYVLLS 720
             H      +    ++  L  +P+  S   LLS
Sbjct: 643 ARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 242/507 (47%), Gaps = 41/507 (8%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY+K GR++ A+ +F    +R+  SWN ++S   +   ++EAV+F R +   GIKP G  
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 286 IASVLPACSHLE-MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           IAS++ AC+    M   G + H +A++  ++ D  FVG++ V  Y +   V   +++F+ 
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYD-VFVGTSFVHFYASYGIVSNAQKMFNE 119

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + D+ +  W +++  Y  N   +E +  + +M    G+  N   ++ V+ +C        
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRH-EGICCNENNIALVISSCGFLMDIIL 178

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              + GHA+K GL       N+L+ M+   G I  + +IF++M  RDT+SWN++I+    
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
              H ++      M+ + EE N                   TL  +L  CG++  L  GK
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYT-----------------TLSILLSICGSVDYLKWGK 281

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
            +H  A++  L +++ + + L+ +Y+  G    A  +F  MP R++I+WN ++  Y   G
Sbjct: 282 GVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDG 341

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC-----SHSGMVSEGMDLFYKMKDD 639
                L++   M+       + + N VTF +  AAC       +G +  G  +   ++D+
Sbjct: 342 RCLCALKVFAEMLWM-----KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE 396

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
             I  +      ++   G+  K+ +A ++   M P+ DK   W++L+G      N E+ E
Sbjct: 397 LIIGNT------LITFYGKCHKMAEAKKVFQRM-PKLDKV-TWNALIGG--FANNAELNE 446

Query: 700 IAAQNLFLLEPDVAS-HYVLLSNIYSS 725
             A    + E   +   Y+ + NI  S
Sbjct: 447 AVAAFKLMREGSTSGVDYITIVNILGS 473


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/661 (39%), Positives = 381/661 (57%), Gaps = 61/661 (9%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           LM  YA  G     + +F    DR++V +N ++ S   N ++ + ++  R+M   G +PD
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRRV 341
             +   VL ACS  E L  G  IH   L+  + +D N FVG+ L+ MY  C  +   RRV
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLK--VGLDFNLFVGNGLIAMYGKCGCLFEARRV 176

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  K +  WN+M+ GY  N   ++AL +  +ME+  G  P+  TM+S++PA   + +
Sbjct: 177 FDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDY-GQKPDGCTMASLMPAVANTSS 235

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                                 +N L             + IF ++E ++ +SWN MI  
Sbjct: 236 ----------------------ENVLY-----------VEKIFVNLERKNLISWNVMIRV 262

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y        A+ L  +M+                   R +P++IT  +VLP CG LSAL 
Sbjct: 263 YMKNSLPTQAVDLYLQMEK-----------------CRVEPDAITFASVLPACGDLSALL 305

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G+ IH Y  +  L  ++++ ++L+DMYA+CGCL+ A+RVFD M  R+V +W  +I AYG
Sbjct: 306 LGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYG 365

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
           M G+G   + L   M+  G       P+ + F+A+ +ACSHSG++ EG   F +M DDY 
Sbjct: 366 MTGQGCNAVALFTEMLNSGQ-----APDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYR 420

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I P  +HYAC+VDLLGRAG+V++AY +I  MP E ++   W++LL +CR+  N++IG +A
Sbjct: 421 ITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNER-VWATLLSSCRVFTNMDIGILA 479

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A NL  L P+ + +YVLLSNIY+ A  W +  ++R  MK   +RK PG S +E  +++H 
Sbjct: 480 ADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHT 539

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           FLAGD SH QS++++  L  L  +M++ GYVP+T   LH+V EE+KE  L  HSEKLAI 
Sbjct: 540 FLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIV 599

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           F +LNT     IR+ KNLRVC DCH A K ISKI  REII+RD  RFHHFK+G CSCGDY
Sbjct: 600 FALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDY 658

Query: 882 W 882
           W
Sbjct: 659 W 659



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 243/508 (47%), Gaps = 60/508 (11%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           IQ    +F  + KA+    D+   K++H  +  Y     + ++   L+  Y  CG     
Sbjct: 14  IQQILTSFGLLAKALDQNPDIKTLKKLHTMIF-YLNSHQNPSLGIKLMRSYAACGEPGL- 71

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             KVFD +++++ V +N MI +     ++D  L  FR M+     P ++T   V  ACS 
Sbjct: 72  TRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC 131

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               + LR G  +HG+ L+VG ++N F+ N L+AMY K G + +A+ +F     +D+VSW
Sbjct: 132 ---SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSW 188

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N++V+  + N +F +A+   R+M   G KPDG ++AS++PA +     +T  E       
Sbjct: 189 NSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVA-----NTSSE------- 236

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N + ++  FV                       +  K +  WN MI  Y +N    +A+ 
Sbjct: 237 NVLYVEKIFVN----------------------LERKNLISWNVMIRVYMKNSLPTQAVD 274

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           L+++ME+   + P+A T +SV+PAC    A      IH +  K  L  +  ++N+L+DMY
Sbjct: 275 LYLQMEKCR-VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMY 333

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           +R G ++ +K +FD M+ RD  SW ++I+ Y + GQ  +A+ L  EM N  +        
Sbjct: 334 ARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQ-------- 385

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYA 550
                     P+SI  + +L  C     L +G+        +   T  +   A LVD+  
Sbjct: 386 ---------APDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLG 436

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVII 577
           + G ++ A  +   MP+  N   W  ++
Sbjct: 437 RAGRVDEAYNIIKQMPIEPNERVWATLL 464



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 43/415 (10%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   ++++ + +L + EM     +PDN+ +P VLKA +  ++L  G  IH  V+K G 
Sbjct: 91  IRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGL 150

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
              ++ V N L+ MYGKCG  +++  +VFD +  KD VSWNSM+A      ++D ALE  
Sbjct: 151 DF-NLFVGNGLIAMYGKCGC-LFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M     +P   T+ S+  A +N S  + L + +                         
Sbjct: 209 REMEDYGQKPDGCTMASLMPAVANTSSENVLYVEK------------------------- 243

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                     +F + E ++L+SWN ++    +N    +AV    QM    ++PD ++ AS
Sbjct: 244 ----------IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFAS 293

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPAC  L  L  G+ IH Y  +   L  N  + ++L+DMY  C  ++  +RVFD +  +
Sbjct: 294 VLPACGDLSALLLGRRIHEYVEKKK-LCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR 352

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +A W ++I+ YG       A+ LF +M   +G  P++    +++ AC  S    D+  I
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLN-SGQAPDSIAFVAILSACSHS-GLLDEGRI 410

Query: 409 HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
           +   +         +++   L+D+  R GR++ +  I   M +  +   W T+++
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 6/216 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +R   +++   +A+  Y++M +  ++PD   F +VL A   +  L LG++IH +V
Sbjct: 255 SWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYV 314

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K      ++ + N+L++MY +CG  + D  +VFDR+  +D  SW S+I+     G+   
Sbjct: 315 EKKKL-CPNLLLENSLIDMYARCGC-LDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCN 372

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  ML S   P S   V++  ACS+    D  R+  +   +  R+          L
Sbjct: 373 AVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYA-CL 431

Query: 224 MAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSS 257
           + +  + GRVD+A  + K    E  + V W T++SS
Sbjct: 432 VDLLGRAGRVDEAYNIIKQMPIEPNERV-WATLLSS 466


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/645 (39%), Positives = 381/645 (59%), Gaps = 49/645 (7%)

Query: 263 KFLEAVMFLRQMAL--RGIKPDG--VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +F E     R M L  +  KPD    +  SVL  C+ L+ +  G+ IH+    ND+ +D 
Sbjct: 77  RFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVD- 135

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             +GS LV MY  C ++  GRR+FD ++++K+ LWN ++ GY +     E+L LF +M E
Sbjct: 136 GVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE 195

Query: 379 VA--------GLWP-----NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR---- 421
           +          L+      +  + +S++   V +        +    + LG+  D     
Sbjct: 196 LGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMV 255

Query: 422 ----YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
                + N L+DMYS+ G +  +  +F+ M  R  VSW +MI GY    + G + M +R 
Sbjct: 256 SVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY---AREGLSDMSVRL 312

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
              ME+E       DL        PNSIT+  +LP C +L+AL +G+EIH + +RN  + 
Sbjct: 313 FHEMEKE-------DL-------FPNSITMACILPACASLAALERGQEIHGHILRNGFSL 358

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           D  V +ALVDMY KCG L  AR +FD++P +++++W V+I  YGMHG G E +     M 
Sbjct: 359 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM- 417

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
               R   ++P+EV+FI++  ACSHSG++ EG   F  M+++  IEP  +HYAC+VDLL 
Sbjct: 418 ----RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLA 473

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG +  AY+ I MMP E D A  W +LL  CRI+ +V++ E  A+++F LEP+   +YV
Sbjct: 474 RAGNLSKAYKFIKMMPIEPD-ATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYV 532

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LL+NIY+ A+ W++   +R+++   G+RK PGCSWIE   ++H F+ GD SH  + ++  
Sbjct: 533 LLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 592

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            L+    RM++EG+ P     L   ++ EKE  LCGHSEK+A+AFGIL+ PPG T+RV K
Sbjct: 593 LLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTK 652

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLRVC DCH+  KF+SK+  R+IILRD  RFHHFK+G+CSC  +W
Sbjct: 653 NLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 96/451 (21%)

Query: 199 LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG------------------RVDDAKTLF 240
           LR GR++     +V     F+ N LM  YAK+G                  RV+ A+ LF
Sbjct: 152 LREGRRIFD---KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLF 208

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
               DRD++SWN+++S    N    + +    QM L GI  D  ++ SV           
Sbjct: 209 DELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV----------- 257

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
                       ++ ++N      L+DMY     +    +VF+ + ++ +  W +MI GY
Sbjct: 258 ------------ELTLNN-----CLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 300

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            +    + ++ LF +ME+   L+PN+ TM+ ++PAC    A    + IHGH ++ G   D
Sbjct: 301 AREGLSDMSVRLFHEMEK-EDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 359

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
           R+V NAL+DMY + G + +++ +FD +  +D VSW  MI GY + G   +A+    EM+N
Sbjct: 360 RHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRN 419

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
              E                 P+ ++ +++L  C     L +G     +   NM+  +  
Sbjct: 420 SGIE-----------------PDEVSFISILYACSHSGLLDEG-----WGFFNMMRNNCC 457

Query: 541 VG------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE-------G 586
           +       + +VD+ A+ G L+ A +   +MP+  +   W  ++    ++ +        
Sbjct: 458 IEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVA 517

Query: 587 QEVLE----------LLKNMVAEGSRGGEVK 607
           + V E          LL N+ AE  +  EVK
Sbjct: 518 EHVFELEPENTGYYVLLANIYAEAEKWEEVK 548



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   AR      ++  + EM + D+ P++     +L A A +  L  G++IH H+
Sbjct: 292 SWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHI 351

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+ L    VAN LV+MY KCG+ +     +FD I EKD VSW  MIA     G    
Sbjct: 352 LRNGFSLDR-HVANALVDMYLKCGA-LGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSE 409

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A+ AF  M  S +EP   + +S+  ACS+
Sbjct: 410 AIAAFNEMRNSGIEPDEVSFISILYACSH 438


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/750 (35%), Positives = 405/750 (54%), Gaps = 90/750 (12%)

Query: 198 GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           GLR  R++  + + +   N F  N+L++M+AK GR+ DA+ +F    +RD VSW  +V  
Sbjct: 80  GLRDARRLF-DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L++  +F EA+  L  M   G  P   ++ +VL +C+  +    G+++H++ ++   L  
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGS 197

Query: 318 NSFVGSALVDMYCNCREVECGRRVFD-------------------------------FIS 346
              V +++++MY  C + E    VF+                                + 
Sbjct: 198 CVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + I  WNAMI GY QN  D +AL LF +M   + + P+  T++SV+ AC         +
Sbjct: 258 GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD--------------------- 445
            +H + ++  +  +  V NAL+  Y++ G +E ++ I D                     
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377

Query: 446 --DMEV----------RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             DME           RD V+W  MI GY   G++ +A+ L R M               
Sbjct: 378 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM--------------- 422

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                 P+PNS TL  VL  C +L+ L  GK+IH  AIR++L     V +A++ MYA+ G
Sbjct: 423 --ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSG 480

Query: 554 CLNFARRVFDLMPVRN-VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
              +ARR+FD +  R   ITW  +I+A   HG+G+E + L + M+  G     V+P+ +T
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG-----VEPDRIT 535

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           ++ + +ACSH+G V+EG   + ++K+++ I P   HYAC+VDLL RAG   +A + I  M
Sbjct: 536 YVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM 595

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E D A AW SLL ACR+H+N E+ E+AA+ L  ++P+ +  Y  ++N+YS+   W  A
Sbjct: 596 PVEPD-AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             + K  KE  VRKE G SW     +IH F A D  H Q + ++     + E ++  G+V
Sbjct: 655 ARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFV 714

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           PD   VLH+V++E KE LL  HSEKLAIAFG+++TP  TT+RV KNLRVCNDCH A K I
Sbjct: 715 PDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAI 774

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SK+  REII+RD  RFHHF++G CSC DYW
Sbjct: 775 SKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 251/546 (45%), Gaps = 95/546 (17%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+L++M+ K G  + D   VF  + E+D VSW  M+  L R G++  A++    M     
Sbjct: 102 NSLLSMFAKSGR-LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAK------ 229
            P+ FTL +V  +C+         +GR+VH   +++G  +   + N+++ MY K      
Sbjct: 161 TPTQFTLTNVLSSCAVT---QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAET 217

Query: 230 -------------------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
                                    LGR+D A++LF+S   R +VSWN +++  +QN   
Sbjct: 218 ASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLD 277

Query: 265 LEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
            +A+ +F R +    + PD  +I SVL AC++L  +  GK++HAY LR ++   NS V +
Sbjct: 278 AKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY-NSQVTN 336

Query: 324 ALVDMYCNCREVECGRRVFD---------------------------------FISDKKI 350
           AL+  Y     VE  RR+ D                                  ++++ +
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W AMI GY QN  ++EA+ LF  M    G  PN+ T+++V+  C         + IH 
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
            AI+  L R   V NA++ MY+R G    ++ +FD +  R +T++W +MI      GQ  
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +A+ L  EM     E                 P+ IT + VL  C     + +GK  +  
Sbjct: 516 EAVGLFEEMLRAGVE-----------------PDRITYVGVLSACSHAGFVNEGKRYYD- 557

Query: 530 AIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEG 586
            I+N   +A ++   + +VD+ A+ G  + A+     MPV  + I W  ++ A  +H + 
Sbjct: 558 QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH-KN 616

Query: 587 QEVLEL 592
            E+ EL
Sbjct: 617 AELAEL 622



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 86/512 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+ +F EAI + ++MT     P  F    VL + A  Q  ++G+++H+ V
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 190

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G G S V VAN+++NMYGKCG D      VF+R+  +   SWN+M++     G+ DL
Sbjct: 191 VKLGLG-SCVPVANSVLNMYGKCG-DAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDL 248

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A   F                                RM+  S++ P  FT+ SV  AC+
Sbjct: 249 AESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD--------------- 235
           NL     +R+G+QVH   LR    +N+ + NAL++ YAK G V++               
Sbjct: 309 NLG---NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNV 365

Query: 236 ------------------AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                             A+ +F    +RD+V+W  ++    QN +  EA+   R M   
Sbjct: 366 ISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITC 425

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A+VL  C+ L  LD GK+IH  A+R+ +L  +S V +A++ MY        
Sbjct: 426 GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLERSSSVSNAIITMYARSGSFPW 484

Query: 338 GRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            RR+FD +  +K  + W +MI    Q+   EEA+ LF +M   AG+ P+  T   V+ AC
Sbjct: 485 ARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR-AGVEPDRITYVGVLSAC 543

Query: 397 VRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
             +  F ++   +   IK    +  +      ++D+ +R G    ++     M V  D +
Sbjct: 544 SHA-GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +W ++++    C  H +A     E+  +  EK
Sbjct: 603 AWGSLLSA---CRVHKNA-----ELAELAAEK 626


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 287/827 (34%), Positives = 446/827 (53%), Gaps = 102/827 (12%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQ-DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M   ++ PD   F +VL+A +G +    + +QIHA ++ +G+G SS  V N L+++Y K 
Sbjct: 102 MITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFG-SSPLVCNPLIDLYSKN 160

Query: 127 GSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
           G    D+ K VF+R+  KD VSW +MI+ L + G+ D A+  F  M  S V P+ +   S
Sbjct: 161 GHV--DLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSS 218

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           V  AC+ +   +  +LG Q+HG  ++ G    TF+ NAL+ +Y++ G +  A+ +F    
Sbjct: 219 VLSACTKI---ELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            RD +S+N+++S L+Q      A+    +M L  +KPD V++AS+L AC+ +     GK+
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335

Query: 305 IHAYALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           +H+Y ++    +D++I+ S     L+D+Y  C ++E     F     + + LWN M+  Y
Sbjct: 336 LHSYVIKMGMSSDLIIEGS-----LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
           GQ     E+  +F++M+ + GL PN  T  S++  C    A    E IH   IK G   +
Sbjct: 391 GQLGNLSESYWIFLQMQ-IEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            YV + L+DMY++ G ++ ++ I   +   D VSW  MI GYT      +AL L +EM+N
Sbjct: 450 VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN 509

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                               + ++I   + +  C  + AL +G++IHA +  +  + D+ 
Sbjct: 510 Q-----------------GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLS 552

Query: 541 VGSAL-----VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           +G+AL     + +Y+KCG +  A+R F  MP +NV++WN +I  Y               
Sbjct: 553 IGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY--------------- 597

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
                                    S  G  SE + LF +MK    +   P+H    V  
Sbjct: 598 -------------------------SQHGYGSEAVSLFEEMKQ---LGLMPNH----VTF 625

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           +G              MP E D A  W +LL AC +H+N+EIGE AA++L  LEP+ ++ 
Sbjct: 626 VGE-------------MPIEPD-AMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSAT 671

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           YVLLSN+Y+ +  WD     R+ MK+ GV+KEPG SWIE  + IH F  GD  H  +EQ+
Sbjct: 672 YVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQI 731

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           + ++++L+ER  + GYV D   +L++V +E+K+     HSEKLA+AFG+L+      IRV
Sbjct: 732 YEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRV 791

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVCNDCH   KF+SKI +R I++RD  RFHHF+ G CSC DYW
Sbjct: 792 IKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 278/537 (51%), Gaps = 26/537 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +   +++ +  EAIL + +M +S + P  + F +VL A   I+   LG+Q+H  +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 104 VKYGYGLSSVT-VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK  +GLSS T V N LV +Y + G ++    ++F ++  +D++S+NS+I+ L + G  D
Sbjct: 240 VK--WGLSSETFVCNALVTLYSRWG-NLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-N 221
            AL+ F  M    ++P   T+ S+  AC+++    G + G+Q+H   +++G  +  I+  
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGA--GYK-GKQLHSYVIKMGMSSDLIIEG 353

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ +Y K   ++ A   F + E  ++V WN ++ +  Q     E+     QM + G+ P
Sbjct: 354 SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP 413

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +  S+L  C+ L  LD G++IH   +++     N +V S L+DMY    E++  R +
Sbjct: 414 NQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF-NVYVCSVLIDMYAKHGELDTARGI 472

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
              + ++ +  W AMI GY Q++   EAL LF +ME   G+  +    SS + AC   +A
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN-QGIRSDNIGFSSAISACAGIQA 531

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNA-----LMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               + IH  +   G   D  + NA     L+ +YS+ G IE +K  F +M  ++ VSWN
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWN 591

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MITGY+  G   +A+ L  EM+ +      N+V  + E  +  +P+++   T+L  C  
Sbjct: 592 AMITGYSQHGYGSEAVSLFEEMKQLGLMP--NHVTFVGEMPI--EPDAMIWRTLLSAC-- 645

Query: 517 LSALAKGKEIHAYAIRNML---ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
              + K  EI  +A R++L     D      L +MYA  G  ++  R   +M  R V
Sbjct: 646 --TVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGV 700



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 234/471 (49%), Gaps = 28/471 (5%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y   G VD+A  LF      ++  WN ++S L       + +     M    + PD
Sbjct: 51  LIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD 110

Query: 283 GVSIASVLPACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             + ASVL ACS  +      ++IHA  + +     +  V + L+D+Y     V+  + V
Sbjct: 111 ESTFASVLRACSGGKAPFQVTEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLV 169

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  K    W AMI+G  QN  ++EA++LF +M + A + P     SSV+ AC + E 
Sbjct: 170 FERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIEL 228

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F   E +HG  +K GL  + +V NAL+ +YSR G +  ++ IF  M  RD +S+N++I+G
Sbjct: 229 FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISG 288

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G    AL L  +MQ             LD      KP+ +T+ ++L  C ++ A  
Sbjct: 289 LAQRGFSDRALQLFEKMQ-------------LDCM----KPDCVTVASLLSACASVGAGY 331

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           KGK++H+Y I+  +++D+++  +L+D+Y KC  +  A   F      NV+ WNV+++AYG
Sbjct: 332 KGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYG 391

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G   E   +   M  EG     + PN+ T+ ++   C+  G +  G  +  ++    G
Sbjct: 392 QLGNLSESYWIFLQMQIEG-----LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-G 445

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            + +    + ++D+  + G+++ A  ++  +  E     +W++++     H
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLREE--DVVSWTAMIAGYTQH 494



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 29/300 (9%)

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           MEE  G+  N  T   +   C  S +  D + +H    K G   +  + + L+D+Y   G
Sbjct: 1   MEE-RGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHG 59

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++ +  +FDD+   +   WN +I+G          L L   M              + E
Sbjct: 60  EVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLM--------------ITE 105

Query: 496 TVLRPKPNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            V    P+  T  +VL  C G  +     ++IHA  I +   +  +V + L+D+Y+K G 
Sbjct: 106 NV---TPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGH 162

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           ++ A+ VF+ + +++ ++W  +I     +G   E + L   M         V P    F 
Sbjct: 163 VDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM-----HKSAVIPTPYVFS 217

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
           ++ +AC+   +   G  L +     +G+  S + + C  +V L  R G +  A Q+ + M
Sbjct: 218 SVLSACTKIELFKLGEQL-HGFIVKWGL--SSETFVCNALVTLYSRWGNLIAAEQIFSKM 274


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 283/801 (35%), Positives = 441/801 (55%), Gaps = 51/801 (6%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNS 150
           DL LG+ +H  +++         VAN+L+ +Y +CG+ +     VFD +   +D VSW +
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGA-VASARNVFDGMRGLRDIVSWTA 121

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGN 208
           M + L R G    +L     ML S + P+++TL + A AC    L    G  +   VH  
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVH-- 179

Query: 209 SLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             ++G W T +   +AL+ M A+ G +  A+ +F    ++ +V W  ++S   Q +   E
Sbjct: 180 --KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEE 237

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           AV         G +PD  +++S++ AC+ L  +  G ++H+ ALR  +  D + V   LV
Sbjct: 238 AVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASD-ACVSCGLV 296

Query: 327 DMYCNC---REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           DMY      + ++   +VF+ +    +  W A+I+GY Q+   E  +M          + 
Sbjct: 297 DMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIK 356

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           PN  T SS++ +C           +H H IK        V NAL+ MY+  G +E ++ +
Sbjct: 357 PNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRV 416

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP- 502
           F+ +  R      +MI   T                     + R+  + LD  ++R    
Sbjct: 417 FNQLYER------SMIPCIT---------------------EGRD--FPLDHRIVRMDVG 447

Query: 503 -NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            +S T  +++    ++  L KG+++HA +++    +D  V ++LV MY++CG L  A R 
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+ +  RNVI+W  +I     HG  +  L L  +M+  G     VKPN+VT+IA+ +ACS
Sbjct: 508 FNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG-----VKPNDVTYIAVLSACS 562

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H G+V EG + F  M+ D+G+ P  +HYAC+VDLL R+G V++A + IN MP + D A  
Sbjct: 563 HVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKAD-ALV 621

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLGACR H N+E+GEI A+N+  LEP   + YVLLSN+Y+ A LWD+   +R  M++
Sbjct: 622 WKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRD 681

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             + KE G SW+E  +  H+F AGD SH +++ ++G L+ L  +++  GYVPDTS VLH+
Sbjct: 682 NNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHD 741

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           +++E KE  L  HSEK+A+AFG++ T     IR+ KNLRVC DCH A K++SK   REII
Sbjct: 742 MSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREII 801

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           LRD  RFH  K+G CSCG+YW
Sbjct: 802 LRDSNRFHRMKDGECSCGEYW 822



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 268/565 (47%), Gaps = 44/565 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW       AR+   R ++L   EM  S + P+ +   A   A     +L          
Sbjct: 118 SWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFP-HELYCLVGGVVLG 176

Query: 104 VKYGYGL--SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           + +  GL  + V V + L++M  + G D+    KVFD + EK  V W  +I+   +    
Sbjct: 177 LVHKMGLWGTDVAVGSALIDMLARNG-DLASARKVFDGLIEKTVVVWTLLISRYVQGECA 235

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
           + A+E F   L    EP  +T+ S+  AC+ L     +RLG Q+H  +LR+G   +  + 
Sbjct: 236 EEAVELFLDFLEDGFEPDRYTMSSMISACTELG---SVRLGLQLHSLALRMGLASDACVS 292

Query: 221 NALMAMYAK--LGR-VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMAL 276
             L+ MYAK  +G+ +D A  +F+     D++SW  ++S   Q+      VM L  +M  
Sbjct: 293 CGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLN 352

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             IKP+ ++ +S+L +C+ +   D+G+++HA+ ++++    ++ VG+ALV MY     +E
Sbjct: 353 ESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHT-VGNALVSMYAESGCME 411

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             RRVF+ + ++ +      IT       D   + + + +        +++T +S++ A 
Sbjct: 412 EARRVFNQLYERSMI---PCITEGRDFPLDHRIVRMDVGI--------SSSTFASLISAA 460

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + +H  ++K G G DR+V N+L+ MYSR G +E +   F++++ R+ +SW 
Sbjct: 461 ASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MI+G    G    AL L  +M                  +   KPN +T + VL  C  
Sbjct: 521 SMISGLAKHGYAERALSLFHDM-----------------ILTGVKPNDVTYIAVLSACSH 563

Query: 517 LSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
           +  + +GKE      R+  L   +   + +VD+ A+ G +  A    + MP++ + + W 
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWK 623

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAE 599
            ++ A   H +  EV E+    V E
Sbjct: 624 TLLGACRSH-DNIEVGEITAKNVVE 647


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/604 (40%), Positives = 355/604 (58%), Gaps = 26/604 (4%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + P   + AS+L +C   + +  GK++HA         D + + + LV++YC C  +   
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFD-TVIATKLVNLYCVCDSLSSA 129

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD I    I LWN +I GY  N   E A+ L+ +M +  GL P+  T   V+ AC  
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDY-GLVPDNFTFPFVLKACAA 188

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A      IH H ++ G  +D +V  AL+DMY++ G +  ++ +FD + VRD V WN+M
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +  Y+  G     L L  EM                  +   +P   TL+T +      +
Sbjct: 249 LAAYSQNGHPDACLSLCSEM-----------------VLTGLRPTEATLVTAISASADNA 291

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL +G+E+H  + R    +   V +ALVDMYAKCG +  AR +F+ + V+ V++WN +I 
Sbjct: 292 ALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMIT 351

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y MHG   E L+L + M          KP+ +TF+ + +ACSH G++ EG   F  M  
Sbjct: 352 GYAMHGHATEALDLFEEM------NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           DY I+P+  HY C+VDLLG +G++++AY LI  M    D +G W +LL +C+IH NVE+G
Sbjct: 406 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPD-SGVWGALLNSCKIHANVELG 464

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           EIA + L  LEPD A +YV+LSNIY+ A  W+    +RK M +  ++K   CSWIE  ++
Sbjct: 465 EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNK 524

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H FL+GD SH  S++++  LE +   M++ GY P T  V H+V ++EK  ++C HSE+L
Sbjct: 525 VHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERL 584

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIAFG+++TPPGT + + KNLR+C DCH A KFISKI  REI +RDV R+HHFK+G CSC
Sbjct: 585 AIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSC 644

Query: 879 GDYW 882
           GDYW
Sbjct: 645 GDYW 648



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 196/396 (49%), Gaps = 13/396 (3%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P    + ++L++    + +  GKQ+HA V   G+G  +V +A  LVN+Y  C S +  
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDS-LSS 128

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FDRI + +   WN +I      G ++ A++ +  M    + P +FT   V  AC+ 
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           LS    +  GR++H + ++ G E + F+  AL+ MYAK G V  A+ +F     RD V W
Sbjct: 189 LS---AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++++ SQN      +    +M L G++P   ++ + + A +    L  G+E+H  + R
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            +    +  V +ALVDMY  C  V   R +F+ +  K++  WNAMITGY  + +  EAL 
Sbjct: 306 QEFESHDK-VKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALD 364

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMD 429
           LF +M  VA   P+  T   V+ AC       +        I+     D  VQ+   ++D
Sbjct: 365 LFEEMNRVAK--PDHITFVGVLSACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVD 421

Query: 430 MYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTI 464
           +    GR++ +  +   M+V  D+  W  ++    I
Sbjct: 422 LLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 457



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 170/342 (49%), Gaps = 19/342 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +  +  A+  Y +M    + PDNF FP VLKA A +  +  G++IH HVV
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+    V V   L++MY KCG  +    +VFD+I  +D V WNSM+A   + G  D  
Sbjct: 204 QTGWE-KDVFVGAALIDMYAKCGC-VGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDAC 261

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L     M+ + + P+  TLV+   A S  +    L  GR++HG S R   E +  +  AL
Sbjct: 262 LSLCSEMVLTGLRPTEATLVT---AISASADNAALPQGRELHGLSWRQEFESHDKVKTAL 318

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G V  A+ LF+    + +VSWN +++  + +    EA+    +M  R  KPD 
Sbjct: 319 VDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDH 377

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVF 342
           ++   VL ACSH  +L+ G       +R D  ID +    + +VD+  +   ++     +
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVDLLGHSGRLD---EAY 433

Query: 343 DFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
           + I   K+     +W A++     +   E  E AL   I++E
Sbjct: 434 NLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELE 475


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 297/827 (35%), Positives = 462/827 (55%), Gaps = 42/827 (5%)

Query: 67   EMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
            E T  + +P+ + F +++     + D  L+L +Q+ A + K  + +  + V + LV+ + 
Sbjct: 238  EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSF-VKDLYVGSALVSGFA 296

Query: 125  KCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSF- 181
            + G  + D  K +F+++ +++ V+ N ++  L R  + + A + F+ M     +  SS+ 
Sbjct: 297  RYG--LIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYA 354

Query: 182  TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTL 239
             L+S     SNL  ++G R G++VH   +R    + +I+  NAL+ +YAK   +D+A+++
Sbjct: 355  VLLSAFTEFSNL--KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSI 412

Query: 240  FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            F+    +D VSWN+I+S L  N++F EAV     M   G+ P   S+ S L +C+ L  +
Sbjct: 413  FQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472

Query: 300  DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              G++IH   ++  + +D S V +AL+ +Y     +E  ++VF  + +     WN+ I  
Sbjct: 473  MLGQQIHGEGIKCGLDLDVS-VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGA 531

Query: 360  YGQNEYDE-EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
               +E    +A+  F++M + AG  PN  T  +++ A            IH   +K  + 
Sbjct: 532  LATSEASVLQAIKYFLEMMQ-AGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVA 590

Query: 419  RDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D  ++N L+  Y +  ++E  + IF  M E RD VSWN MI+GY   G    A+ L+  
Sbjct: 591  DDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWL 650

Query: 478  MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
            M    +                 + +  TL TVL  C +++ L +G E+HA AIR  L  
Sbjct: 651  MMQKGQ-----------------RLDDFTLATVLSACASVATLERGMEVHACAIRACLEA 693

Query: 538  DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
            +VVVGSALVDMYAKCG +++A R F+LMPVRN+ +WN +I  Y  HG G + L+L   M 
Sbjct: 694  EVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMK 753

Query: 598  AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
              G       P+ VTF+ + +ACSH G+V EG + F  M + Y + P  +H++C+VDLLG
Sbjct: 754  QHGQL-----PDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLG 808

Query: 658  RAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC--RIHQNVEIGEIAAQNLFLLEPDVASH 715
            RAG V+   + I  MP     A  W ++LGAC     +N E+G  AA+ L  LEP  A +
Sbjct: 809  RAGDVKKLEEFIKTMPMN-PNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVN 867

Query: 716  YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
            YVLLSN++++   W+   + R  M+   V+KE GCSW+   D +H F+AGD +H + E++
Sbjct: 868  YVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKI 927

Query: 776  HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
            +  L+ +  +MR  GYVP+T   L+++  E KE LL  HSEKLAIAF +L       IR+
Sbjct: 928  YDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRI 986

Query: 836  AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             KNLRVC DCH A K+IS I +R+IILRD  RFHHF  G CSC DYW
Sbjct: 987  IKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 178/666 (26%), Positives = 317/666 (47%), Gaps = 50/666 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA--GIQDLSLGKQIHA 101
           SW   +   A++    EA + +  +  + + P+++A  + L+A    G   L LG +IH 
Sbjct: 107 SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHG 166

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            + K  Y  S + ++N L++MY  C + + D  +VF+ I  K   SWNS+I+  CR G  
Sbjct: 167 LISKSPYA-SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDA 225

Query: 162 DLALEAFRMMLYS----NVEPSSFTLVS-VALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
             A + F  M       N  P+ +T  S V +ACS +    GL L  Q+    L   E +
Sbjct: 226 ISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVD--CGLTLLEQM----LARIEKS 279

Query: 217 TFIMN-----ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           +F+ +     AL++ +A+ G +D AK +F+  +DR+ V+ N ++  L++  +  EA    
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGK----EIHAYALRNDILIDNSFVGSALVD 327
           ++M    ++ +  S A +L A +    L  GK    E+HAY +RN ++     +G+ALV+
Sbjct: 340 KEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVN 398

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           +Y  C  ++  R +F  +  K    WN++I+G   NE  EEA+  F  M    G+ P+  
Sbjct: 399 LYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR-NGMVPSKF 457

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           ++ S + +C         + IHG  IK GL  D  V NAL+ +Y+    +E  + +F  M
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
              D VSWN+ I    +       L  ++              Y L+      KPN +T 
Sbjct: 518 PEYDQVSWNSFIGA--LATSEASVLQAIK--------------YFLEMMQAGWKPNRVTF 561

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP- 566
           + +L    +LS L  G++IHA  +++ +A D  + + L+  Y KC  +     +F  M  
Sbjct: 562 INILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSE 621

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+ ++WN +I  Y  +G   + + L+  M+ +G R      ++ T   + +AC+    +
Sbjct: 622 RRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQR-----LDDFTLATVLSACASVATL 676

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             GM++ +       +E      + +VD+  + GK++ A +   +MP       +W+S++
Sbjct: 677 ERGMEV-HACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR--NIYSWNSMI 733

Query: 687 GACRIH 692
                H
Sbjct: 734 SGYARH 739



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 302/618 (48%), Gaps = 57/618 (9%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H  + K G   S V   NTLVN++ + G ++    K+FD + +K+ VSW+ +++   +
Sbjct: 60  QLHLQIYKTGLT-SDVFWCNTLVNIFVRAG-NLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G  D A   FR ++ + + P+ + + S   AC  L   + L+LG ++HG   +    + 
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG-PNMLKLGMEIHGLISKSPYASD 176

Query: 218 FIM-NALMAMYAKL-GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            ++ N LM+MY+     +DDA+ +F+  + +   SWN+I+S   +    + A      M 
Sbjct: 177 MVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQ 236

Query: 276 LRGI----KPDGVSIASVLP-ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
                   +P+  +  S++  ACS ++   T  E     +     + + +VGSALV  + 
Sbjct: 237 REATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
               ++  + +F+ + D+     N ++ G  +    EEA  +F +M+++  +  NA++ +
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI--NASSYA 354

Query: 391 SVVPACVRSEAFPDKEG------IHGHAIKLGLGRDRY--VQNALMDMYSRMGRIEISKT 442
            ++ A   +E    KEG      +H + I+  L  D +  + NAL+++Y++   I+ +++
Sbjct: 355 VLLSA--FTEFSNLKEGKRKGQEVHAYLIRNAL-VDVWILIGNALVNLYAKCNAIDNARS 411

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           IF  M  +DTVSWN++I+G     +  +A+     M+       RN +           P
Sbjct: 412 IFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMR-------RNGMV----------P 454

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +  ++++ L  C +L  +  G++IH   I+  L  DV V +AL+ +YA+  C+   ++VF
Sbjct: 455 SKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVF 514

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
            LMP  + ++WN  I A  +      VL+ +K  +     G   KPN VTFI + +A S 
Sbjct: 515 FLMPEYDQVSWNSFIGA--LATSEASVLQAIKYFLEMMQAGW--KPNRVTFINILSAVSS 570

Query: 623 SGMVSEG-----MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
             ++  G     + L + + DD  IE +      ++   G+  ++ED   + + M    D
Sbjct: 571 LSLLELGRQIHALILKHSVADDNAIENT------LLAFYGKCEQMEDCEIIFSRMSERRD 624

Query: 678 KAGAWSSLLGACRIHQNV 695
           +  +W++++    IH  +
Sbjct: 625 EV-SWNAMISG-YIHNGI 640



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 210/477 (44%), Gaps = 70/477 (14%)

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           HL++  TG            L  + F  + LV+++     +   +++FD +  K +  W+
Sbjct: 62  HLQIYKTG------------LTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWS 109

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD--KEG--IHG 410
            +++GY QN   +EA MLF  +   AGL PN   + S + AC   E  P+  K G  IHG
Sbjct: 110 CLVSGYAQNGMPDEACMLFRGIIS-AGLLPNHYAIGSALRAC--QELGPNMLKLGMEIHG 166

Query: 411 HAIKLGLGRDRYVQNALMDMYSRM-GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
              K     D  + N LM MYS     I+ ++ +F++++++ + SWN++I+ Y    + G
Sbjct: 167 LISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYC---RRG 223

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL--SALAKGKEIH 527
           DA+   +   +M+ E           T L  +PN  T  +++    +L    L   +++ 
Sbjct: 224 DAISAFKLFSSMQREA----------TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQML 273

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A   ++    D+ VGSALV  +A+ G ++ A+ +F+ M  RN +T N +++      +G+
Sbjct: 274 ARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGE 333

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E  ++ K M         V+ N  ++  L +A +    + EG     ++          D
Sbjct: 334 EAAKIFKEM------KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVD 387

Query: 648 HYACV----VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
            +  +    V+L  +   +++A  +  +MP +     +W+S++     ++  E   +A  
Sbjct: 388 VWILIGNALVNLYAKCNAIDNARSIFQLMPSK--DTVSWNSIISGLDHNERFE-EAVACF 444

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           +       V S + ++S + S A L                       WI  G +IH
Sbjct: 445 HTMRRNGMVPSKFSVISTLSSCASL----------------------GWIMLGQQIH 479



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 33/326 (10%)

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           D   +H    K GL  D +  N L++++ R G +  ++ +FD+M  ++ VSW+ +++GY 
Sbjct: 57  DAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYA 116

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL--SALA 521
             G   +A ML R +              +   +L   PN   + + L  C  L  + L 
Sbjct: 117 QNGMPDEACMLFRGI--------------ISAGLL---PNHYAIGSALRACQELGPNMLK 159

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNVIIMAY 580
            G EIH    ++  A+D+V+ + L+ MY+ C   ++ ARRVF+ + ++   +WN II  Y
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY 219

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA-ACSHSGMVSEGMDLFYKMKDD 639
              G+     +L  +M  E +     +PNE TF +L   ACS   +V  G+ L  +M   
Sbjct: 220 CRRGDAISAFKLFSSMQREATELN-CRPNEYTFCSLVTVACS---LVDCGLTLLEQMLAR 275

Query: 640 YGIEPSP---DHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
             IE S    D Y  + +V    R G ++ A  +   M    +       ++G  R HQ 
Sbjct: 276 --IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDR-NAVTMNGLMVGLARQHQG 332

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLS 720
            E  +I  +   L+E + +S+ VLLS
Sbjct: 333 EEAAKIFKEMKDLVEINASSYAVLLS 358


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 287/808 (35%), Positives = 439/808 (54%), Gaps = 34/808 (4%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVS-----WN 149
           KQ+H+ + K G     +++ N L++   + G+   +    K  +   E + +      ++
Sbjct: 50  KQLHSQITKNGLNHHPLSLTN-LISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFS 108

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           S+I      G    A+  FR ++     P +FT   V  AC+   +   L  G QVHG  
Sbjct: 109 SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACT---KSAALTEGFQVHGAI 165

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +++G E + F+ N+L+  Y + G +D  + +F    +R++VSW +++   ++   + EAV
Sbjct: 166 VKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAV 225

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
               +M   GI+P+ V++  V+ AC+ L+ L  G+++       ++ + N+ + +ALVDM
Sbjct: 226 SLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEV-NALMVNALVDM 284

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  ++  R++FD   DK + L+N +++ Y +     E L +  +M +  G  P+  T
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLK-HGPRPDRIT 343

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           M S V AC   +     +  HG+ ++ GL     V NA+++MY + G+ E++  +FD M 
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQN------------MEEEKNRNNVYDLDET 496
            +  VSWN++I G+   G    A  +   M +            + +E       +L   
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 497 VLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           +       + +T++ V   CG L AL   K IH Y  +  +  D+ +G+ALVDM+A+CG 
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
              A +VF+ M  R+V  W   I A  M G G   +EL   M+ +G     +KP+ V F+
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQG-----IKPDGVVFV 578

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           AL  A SH G+V +G  +F  MKD YGI P   HY C+VDLLGRAG + +A  LIN M  
Sbjct: 579 ALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQM 638

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E +    W SLL ACR+H+NV+I   AA+ +  L+P+    +VLLSNIY+SA  WD    
Sbjct: 639 EPNDV-IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAK 697

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR  +KE G  K PG S IE   +I +F  GD SH +   +   L+ +  R+R  GYVPD
Sbjct: 698 VRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPD 757

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            + VL +VNE+EKE LL  HSEKLAIAF +++T  G  IRVAKNLR+C+DCH   K +SK
Sbjct: 758 LTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSK 817

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
             SREII+RD  RFH F+ G CSCGDYW
Sbjct: 818 SYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 161/567 (28%), Positives = 270/567 (47%), Gaps = 76/567 (13%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +AI+ + ++      PDNF FP VL A      L+ G Q+H  +VK G+    + V N+L
Sbjct: 122 KAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFE-RDMFVENSL 180

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ YG+CG ++  + +VFD+++E++ VSW S+I    + G +  A+  F  M+   + P+
Sbjct: 181 IHFYGECG-EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPN 239

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW----NTFIMNALMAMYAKLGRVDD 235
           S T+V V  AC+ L     L+LG QV      +GE     N  ++NAL+ MY K G +D 
Sbjct: 240 SVTMVGVISACAKL---QDLQLGEQV---CTCIGELELEVNALMVNALVDMYMKCGAIDK 293

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F    D++LV +NTI+S+  +     E +  L +M   G +PD +++ S + ACS 
Sbjct: 294 ARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSE 353

Query: 296 LEMLDTGKEIHAYALRNDIL-IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           L+ +  GK  H Y LRN +   DN  V +A+++MY  C + E   RVFD + +K    WN
Sbjct: 354 LDDVSCGKWCHGYVLRNGLEGWDN--VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWN 411

Query: 355 AMITGYGQNEYDEEALMLFIKME------------------------------EVAGLWP 384
           ++I G+ +N   E A  +F  M                               +  G+  
Sbjct: 412 SLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITA 471

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +  TM  V  AC    A    + IHG+  K  +  D ++  AL+DM++R G  + +  +F
Sbjct: 472 DKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVF 531

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           + M  RD  +W   I    + G    A+ L  EM              L + +   KP+ 
Sbjct: 532 NKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEM--------------LQQGI---KPDG 574

Query: 505 ITLMTVLPGCGALSALAKGKEIHA--YAIRNM-----LATDVVVGSALVDMYAKCGCLNF 557
           +  + +      L+AL+ G  +    +  R+M     +A   V    +VD+  + G L+ 
Sbjct: 575 VVFVAL------LTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMH 583
           A  + + M +  N + W  ++ A  +H
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVH 655



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 209/462 (45%), Gaps = 61/462 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+   ++EA+  + EM    I+P++     V+ A A +QDL LG+Q+   +
Sbjct: 207 SWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCI 266

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +    ++++ V N LV+MY KCG+ +    K+FD   +K+ V +N++++   R G    
Sbjct: 267 GELELEVNALMV-NALVDMYMKCGA-IDKARKIFDECVDKNLVLYNTIMSNYVRQGLARE 324

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
            L     ML     P   T++S   ACS L   D +  G+  HG  LR G   W+  + N
Sbjct: 325 VLAVLGEMLKHGPRPDRITMLSAVSACSEL---DDVSCGKWCHGYVLRNGLEGWDN-VCN 380

Query: 222 ALMAMYAKLGR-------------------------------VDDAKTLFKSFEDRDLVS 250
           A++ MY K G+                               ++ A  +F +  D DLVS
Sbjct: 381 AIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVS 440

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WNT++ +L Q   F EA+   R M   GI  D V++  V  AC +L  LD  K IH Y  
Sbjct: 441 WNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIK 500

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           + DI  D   +G+ALVDM+  C + +   +VF+ +  + ++ W A I           A+
Sbjct: 501 KKDIHFD-MHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAI 559

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRS----------EAFPDKEGIHGHAIKLGLGRD 420
            LF +M +  G+ P+     +++ A               +  D  GI   A+  G    
Sbjct: 560 ELFDEMLQ-QGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG---- 614

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
                 ++D+  R G +  + ++ + M++  + V W +++  
Sbjct: 615 -----CMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAA 651


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/713 (36%), Positives = 410/713 (57%), Gaps = 38/713 (5%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML   V P+++T      ACS L+       GR +H +++  G + + F+  AL+ MY K
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADH---HCGRAIHRHAIHAGLQADLFVSTALLDMYVK 57

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL--RQMALRGIKPDGVSIA 287
              + DA  +F +   RDLV+WN +++  + +  +  AV  L   QM +  ++P+  ++ 
Sbjct: 58  CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDI---------LIDNSFVGSALVDMYCNCREVECG 338
           ++LP  +    L  G  +HAY +R  +         L D   +G+AL+DMY  C  +   
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           RRVFD +  +    W+A+I G+       +A +LF  M      + + T+++S + AC  
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            +     E +H    K G+  D    N+L+ MY++ G I+ +  +FD+M V+DTVS++ +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ++GY   G+  +A ++ ++MQ    E                 P++ T+++++P C  L+
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVE-----------------PDAATMVSLIPACSHLA 340

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  G+  H   I   LA++  + +AL+DMYAKCG ++ +R+VF++MP R++++WN +I 
Sbjct: 341 ALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 400

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            YG+HG G+E   L   M   G       P+ VTFI L +ACSHSG+V EG   F+ M  
Sbjct: 401 GYGIHGLGKEATALFLEMNNLG-----FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGH 455

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            YG+ P  +HY C+VDLL R G +++AY+ I  MP   D    W +LLGACR+++N+++G
Sbjct: 456 GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD-VRVWVALLGACRVYKNIDLG 514

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           +  ++ +  L P+   ++VLLSNIYS+A  +D+A +VR   K  G +K PGCSWIE    
Sbjct: 515 KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGS 574

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+ GD SH QS +++  L+N+   ++K GY PDTS VL ++ EEEKE  L  HSEKL
Sbjct: 575 LHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKL 634

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
           AIA+GIL+     TI V KNLRVC DCH   K IS ++ R II+RD  RFHHF
Sbjct: 635 AIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 275/560 (49%), Gaps = 57/560 (10%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R  + P+N+ FP  LKA + + D   G+ IH H +  G   + + V+  L++MY KC 
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCA 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA---LEAFRMMLYSNVEPSSFTLV 184
             + D   +F  +  +D V+WN+M+A     G +  A   L + +M ++  + P++ TLV
Sbjct: 60  C-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH-RLRPNASTLV 117

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEW-----------NTFIMNALMAMYAKLGRV 233
           ++      L+++  L  G  VH   +R                  +  AL+ MYAK G +
Sbjct: 118 AL---LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG---IKPDGVSIASVL 290
             A+ +F +   R+ V+W+ ++       +  +A +  + M  +G   + P   SIAS L
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASAL 232

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC+ L+ L  G+++HA   ++ +  D +  G++L+ MY     ++    +FD ++ K  
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLT-AGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             ++A+++GY QN   EEA ++F KM +   + P+A TM S++PAC    A       HG
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             I  GL  +  + NAL+DMY++ GRI++S+ +F+ M  RD VSWNTMI GY I G   +
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI---- 526
           A  L  EM N                 L   P+ +T + +L  C     + +GK      
Sbjct: 411 ATALFLEMNN-----------------LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453

Query: 527 -HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            H Y +   +   +     +VD+ ++ G L+ A      MP+R +V  W  ++ A  ++ 
Sbjct: 454 GHGYGLTPRMEHYI----CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYK 509

Query: 585 E---GQEVLELLKNMVAEGS 601
               G++V  +++ +  EG+
Sbjct: 510 NIDLGKKVSRMIQELGPEGT 529


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/706 (36%), Positives = 393/706 (55%), Gaps = 25/706 (3%)

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDA 236
           S  T  ++ L   N      +RLGR VH   ++        F+ N L+ MY+KL   + A
Sbjct: 2   SLLTADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + + +    R++VSW ++VS L+QN  F  A+    +M   G+ P+  +   V  A + L
Sbjct: 62  RLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASL 121

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
            +  TGK+IHA A++   ++D  FVG +  DMYC  R  +  R++FD I ++ +  WNA 
Sbjct: 122 RLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAY 180

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+    +   +EA+  FI+   + G  PN+ T    + AC           +HG   + G
Sbjct: 181 ISNSVTDGRPKEAIEAFIEFRRIGG-QPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSG 239

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
              D  V N L+D Y +  +I  S+ IF +M +++ VSW +++  Y              
Sbjct: 240 FDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAY-------------- 285

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            +QN E+EK   +V  L       + +   + +VL  C  ++ L  G+ IHA+A++  + 
Sbjct: 286 -VQNHEDEKA--SVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            ++ VGSALVDMY KCGC+  + + FD MP +N++T N +I  Y   G+    L L ++M
Sbjct: 343 RNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDM 402

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                RG    PN +TF++L +ACS +G V  GM +F  MK  YGIEP  +HY+C+VD+L
Sbjct: 403 ---APRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDML 459

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG VE A++ I  MP +      W +L  ACR+H    +G +AA+NLF L+P  + ++
Sbjct: 460 GRAGMVEQAFEFIKKMPIK-PTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNH 518

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLLSN +++A  W +A  VR++MK +G++K  G SWI   +++H F A D SH+ ++++ 
Sbjct: 519 VLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQ 578

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
             L  L  +M   GY PD    L+++ EEEK   +  HSEKLA+AFG++  P    IR+ 
Sbjct: 579 TMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRIT 638

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLR+C DCH   KF+S    REII+RD  RFH FK+G CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 245/518 (47%), Gaps = 40/518 (7%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +LK       + LG+ +HA +VK         +AN L+NMY K   D  +  ++  
Sbjct: 8   ALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL--DHPESARLVL 65

Query: 139 RIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           R+T  ++ VSW S+++ L + G +  AL  F  M    V P+ FT   V  A ++     
Sbjct: 66  RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVAS----- 120

Query: 198 GLRL---GRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            LRL   G+Q+H  +++ G   + F+  +   MY K    DDA+ LF    +R+L +WN 
Sbjct: 121 -LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
            +S+   + +  EA+    +    G +P+ ++    L ACS   +LD G ++H    R+ 
Sbjct: 180 YISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSG 239

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D S V + L+D Y  C+++     +F  +  K    W +++  Y QN  DE+A +L+
Sbjct: 240 FDTDVS-VYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLY 298

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           ++  +   +  +   +SSV+ AC           IH HA+K  + R+ +V +AL+DMY +
Sbjct: 299 LRSRKEI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGK 357

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G IE S+  FD+M  ++ V+ N++I GY   GQ   AL L                 D+
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFE---------------DM 402

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-----LVDM 548
                 P PN +T +++L  C    A+  G +I      +M +T  +   A     +VDM
Sbjct: 403 APRGCGPAPNYMTFVSLLSACSRAGAVENGMKI----FDSMKSTYGIEPGAEHYSCIVDM 458

Query: 549 YAKCGCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGE 585
             + G +  A      MP++  I+ W  +  A  MHG+
Sbjct: 459 LGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGK 496



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 236/493 (47%), Gaps = 31/493 (6%)

Query: 5   AQCLTLLPSPPLSSLQTH------QPPATTATSLPLPGSQTRCKESWIESLRSEARSNQF 58
           A+ +  L SPP   L  +      +     +  L L  +  R   SW   +   A++  F
Sbjct: 30  ARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHF 89

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
             A+  + EM R  + P++F FP V KAVA ++    GKQIHA  VK G  L  V V  +
Sbjct: 90  STALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRIL-DVFVGCS 148

Query: 119 LVNMYGKCGSDMW-DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
             +MY  C + +  D  K+FD I E++  +WN+ I+     G+   A+EAF        +
Sbjct: 149 AFDMY--CKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQ 206

Query: 178 PSSFTLVSVALACSNLSRRDG--LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           P+S T      ACS     DG  L LG Q+HG   R G + +  + N L+  Y K  ++ 
Sbjct: 207 PNSITFCGFLNACS-----DGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQMALRGIKPDGVSIASVLPAC 293
            ++ +F     ++ VSW ++V++  QN +  +A V++LR      ++     I+SVL AC
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-EIVETSDFMISSVLSAC 320

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + +  L+ G+ IHA+A++   +  N FVGSALVDMY  C  +E   + FD + +K +   
Sbjct: 321 AGMAGLELGRSIHAHAVKA-CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL 379

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVPACVRSEAFPDKEGIHG-- 410
           N++I GY      + AL LF  M     G  PN  T  S++ AC R+ A  +   I    
Sbjct: 380 NSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSM 439

Query: 411 -HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQH 468
                +  G + Y  + ++DM  R G +E +      M ++ T+S W  +      C  H
Sbjct: 440 KSTYGIEPGAEHY--SCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL---QNACRMH 494

Query: 469 GDALMLLREMQNM 481
           G   + +   +N+
Sbjct: 495 GKPHLGILAAENL 507


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/732 (35%), Positives = 394/732 (53%), Gaps = 89/732 (12%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N+L++MYAK GR+ DA+ +F    +RD VSW  +V  L++  +F +AV     M 
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+ P    + +VL +C+  E    G+++H++ ++   L     V ++++ MY  C + 
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLG-LSSCVPVANSVLYMYGKCGDA 214

Query: 336 ECGRRVFDFIS-------------------------------DKKIALWNAMITGYGQNE 364
           E  R VF+ +                                ++ I  WNA+I GY QN 
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            D+ AL  F +M   + + P+  T++SV+ AC         + +H + ++ G+     + 
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334

Query: 425 NALMDMYSRMGRIEISKTI---------------------------------FDDMEVRD 451
           NAL+  Y++ G +E ++ I                                 FD M  RD
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W  MI GY   GQ+ +A+ L R M                     P+PNS TL  VL
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSG-----------------PEPNSHTLAAVL 437

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-V 570
             C +L+ L  GK+IH  AIR++    V V +A++ +YA+ G +  ARRVFD +  R   
Sbjct: 438 SACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKET 497

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           +TW  +I+A   HG G++ + L + M+  G     VKP+ VT+I +F+AC+H+G + +G 
Sbjct: 498 VTWTSMIVALAQHGLGEQAIVLFEEMLRVG-----VKPDRVTYIGVFSACTHAGFIDKGK 552

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             + +M +++GI P   HYAC+VDLL RAG + +A++ I  MP   D    W SLL ACR
Sbjct: 553 RYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTV-VWGSLLAACR 611

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           + +N ++ E+AA+ L  ++PD +  Y  L+N+YS+   W+ A  + K  K+  V+KE G 
Sbjct: 612 VRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGF 671

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SW     ++H F A D  H Q + +      + E ++K G+VPD + VLH+V++E KE L
Sbjct: 672 SWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEEL 731

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG+++TP  TT+R+ KNLRVCNDCH A KFISK+  REII+RD  RFHH
Sbjct: 732 LSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHH 791

Query: 871 FKNGTCSCGDYW 882
           F++G CSC DYW
Sbjct: 792 FRDGYCSCKDYW 803



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 263/591 (44%), Gaps = 128/591 (21%)

Query: 94  SLGKQIHAHVVKYG------------------------------------YGLSSVTVAN 117
           S G+ IHAH VK G                                    Y   +    N
Sbjct: 42  SAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWN 101

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK-WDLALEAFRMMLYSNV 176
           +L++MY K G  + D   VF ++ E+D VSW  M+  L R G+ WD A++ F  M+   +
Sbjct: 102 SLLSMYAKSGR-LADARVVFAQMPERDAVSWTVMVVGLNRAGRFWD-AVKTFLDMVGEGL 159

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG------EWNTFIM---------- 220
            PS F L +V  +C+    R    +GR+VH   +++G        N+ +           
Sbjct: 160 APSQFMLTNVLSSCAATEARG---IGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216

Query: 221 ----------------NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
                           NA++++Y   GR+D A ++F++ E+R +VSWN I++  +QN   
Sbjct: 217 ARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLD 276

Query: 265 LEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--------- 314
             A+ F  R +    ++PD  ++ SVL AC++L ML  GK++H+Y LR  +         
Sbjct: 277 DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNA 336

Query: 315 ----------------LIDNSFVG-------SALVDMYCNCREVECGRRVFDFISDKKIA 351
                           ++D + V        +AL++ Y    + +  R VFD ++++ + 
Sbjct: 337 LISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI 396

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W AMI GY QN  ++EA+ LF  M   +G  PN+ T+++V+ AC         + IH  
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIR-SGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           AI+    +   V NA++ +Y+R G + +++ +FD +  R +TV+W +MI      G    
Sbjct: 456 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQ 515

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A++L  EM  +                   KP+ +T + V   C     + KGK  +   
Sbjct: 516 AIVLFEEMLRVG-----------------VKPDRVTYIGVFSACTHAGFIDKGKRYYEQM 558

Query: 531 I-RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +  + +  ++   + +VD+ A+ G L  A      MPV  + + W  ++ A
Sbjct: 559 LNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 231/489 (47%), Gaps = 80/489 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+ +F +A+ ++++M    + P  F    VL + A  +   +G+++H+ V
Sbjct: 130 SWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFV 189

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S V VAN+++ MYGKCG D      VF+R+  + + SWN+M++     G+ DL
Sbjct: 190 IKLGLS-SCVPVANSVLYMYGKCG-DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDL 247

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           AL  F                                RM+  S++EP  FT+ SV  AC+
Sbjct: 248 ALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACA 307

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL----------- 239
           NL     L++G+Q+H   LR G  +++ IMNAL++ YAK G V+ A+ +           
Sbjct: 308 NLRM---LKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNV 364

Query: 240 ----------------------FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                                 F    +RD+++W  ++    QN +  EA+   R M   
Sbjct: 365 ISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRS 424

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVE 336
           G +P+  ++A+VL AC+ L  L  GK+IH  A+R+  L + S  V +A++ +Y     V 
Sbjct: 425 GPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRS--LQEQSVSVSNAIITVYARSGSVP 482

Query: 337 CGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
             RRVFD I   K+   W +MI    Q+   E+A++LF +M  V G+ P+  T   V  A
Sbjct: 483 LARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRV-GVKPDRVTYIGVFSA 541

Query: 396 CVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
           C  +  F DK   +   +  + G+  +      ++D+ +R G +  +      M V  DT
Sbjct: 542 CTHA-GFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDT 600

Query: 453 VSWNTMITG 461
           V W +++  
Sbjct: 601 VVWGSLLAA 609



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 42/349 (12%)

Query: 16  LSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE--MTRSDI 73
           + SL THQ     A S+     + R   SW  ++ +    N   +  L +    +T S +
Sbjct: 235 MVSLYTHQGRMDLALSM-FENMEERSIVSW-NAIIAGYNQNGLDDMALKFFSRMLTASSM 292

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS----- 128
           +PD F   +VL A A ++ L +GKQ+H+++++ G   SS  + N L++ Y K GS     
Sbjct: 293 EPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSS-QIMNALISTYAKSGSVETAR 351

Query: 129 ---------------------------DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
                                      D     +VFD +  +D ++W +MI    + G+ 
Sbjct: 352 RIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQN 411

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIM 220
           D A+E FR M+ S  EP+S TL +V  AC++L+    L  G+Q+H  ++R + E +  + 
Sbjct: 412 DEAMELFRSMIRSGPEPNSHTLAAVLSACASLAY---LGYGKQIHCRAIRSLQEQSVSVS 468

Query: 221 NALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           NA++ +YA+ G V  A+ +F      ++ V+W +++ +L+Q+    +A++   +M   G+
Sbjct: 469 NAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGV 528

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           KPD V+   V  AC+H   +D GK  +   L    ++      + +VD+
Sbjct: 529 KPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDL 577



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 35/262 (13%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           R+ +  N+L+ MY++ GR+  ++ +F  M  RD VSW  M+ G    G+  DA+    +M
Sbjct: 95  RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                         + E +    P+   L  VL  C A  A   G+++H++ I+  L++ 
Sbjct: 155 --------------VGEGL---APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSC 197

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V V ++++ MY KCG    AR VF+ M VR+  +WN ++  Y   G     L + +NM  
Sbjct: 198 VPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENM-- 255

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY-------AC 651
                   + + V++ A+ A  + +G+    +  F +M     +E  PD +       AC
Sbjct: 256 -------EERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSME--PDEFTVTSVLSAC 306

Query: 652 VVDLLGRAGKVEDAYQLINMMP 673
               + + GK   +Y L   MP
Sbjct: 307 ANLRMLKMGKQMHSYILRTGMP 328



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKC----GCLNFARRVFDLMPV--RNVITWNVI 576
           G+ IHA+A++  L     + + L+  YA+     GC + ARR+FD +P   RN  TWN +
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 577 IMAYGMHGE 585
           +  Y   G 
Sbjct: 104 LSMYAKSGR 112


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/731 (34%), Positives = 402/731 (54%), Gaps = 87/731 (11%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            TF  N +++ +AK G +D A+ +F      D VSW T++   +    F  AV    +M 
Sbjct: 78  TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----------NDIL---------- 315
             GI P   +  +VL +C+  + LD GK++H++ ++          N +L          
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV 197

Query: 316 ----------IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
                     + ++   + ++ M+    + +    +FD ++D  I  WN++ITGY    Y
Sbjct: 198 MAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGY 257

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           D  AL  F  M + + L P+  T+ SV+ AC   E+    + IH H ++  +     V N
Sbjct: 258 DIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN 317

Query: 426 ALMDMYSRMGRIEI---------------------------------SKTIFDDMEVRDT 452
           AL+ MY++ G +E+                                 ++ IFD ++ RD 
Sbjct: 318 ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDV 377

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V+W  MI GY   G   DAL+L R M  + E                PKPN+ TL  VL 
Sbjct: 378 VAWTAMIVGYAQNGLISDALVLFRLM--IREG---------------PKPNNYTLAAVLS 420

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD-LMPVRNVI 571
              +L++L  GK++HA AIR    + V VG+AL+ MY++ G +  AR++F+ +   R+ +
Sbjct: 421 VISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTL 480

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TW  +I++   HG G E +EL + M+        +KP+ +T++ + +AC+H G+V +G  
Sbjct: 481 TWTSMILSLAQHGLGNEAIELFEKMLRI-----NLKPDHITYVGVLSACTHVGLVEQGKS 535

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  MK+ + IEP+  HYAC++DLLGRAG +E+AY  I  MP E D   AW SLL +CR+
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVV-AWGSLLSSCRV 594

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+ V++ ++AA+ L L++P+ +  Y+ L+N  S+   W+ A  VRK MK+  V+KE G S
Sbjct: 595 HKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFS 654

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W++  +++H F   D  H Q + ++  +  + + ++K G++PDT+ VLH++ +E KE +L
Sbjct: 655 WVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQIL 714

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLAIAF ++NTP  TT+R+ KNLRVCNDCH A ++IS +  REII+RD  RFHHF
Sbjct: 715 RHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHF 774

Query: 872 KNGTCSCGDYW 882
           K+G+CSC DYW
Sbjct: 775 KDGSCSCQDYW 785



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 233/503 (46%), Gaps = 91/503 (18%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           +P P S      SW   +        F+ A+ +++ M  S I P  F F  VL + A  Q
Sbjct: 105 IPQPDSV-----SWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQ 159

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG----------------SDMWDV-- 133
            L +GK++H+ VVK G     V VAN+L+NMY KCG                +  W+   
Sbjct: 160 ALDVGKKVHSFVVKLGQS-GVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMI 218

Query: 134 ------------YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSS 180
                         +FD++T+ D VSWNS+I   C  G    ALE F  ML  S+++P  
Sbjct: 219 SMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDK 278

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA----------- 228
           FTL SV  AC+N   R+ L+LG+Q+H + +R   +    + NAL++MYA           
Sbjct: 279 FTLGSVLSACAN---RESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRI 335

Query: 229 ----------------------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
                                 K+G +D A+ +F S + RD+V+W  ++   +QN    +
Sbjct: 336 VEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISD 395

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           A++  R M   G KP+  ++A+VL   S L  LD GK++HA A+R +  + +  VG+AL+
Sbjct: 396 ALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLE-EVSSVSVGNALI 454

Query: 327 DMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            MY     ++  R++F+ I   +  L W +MI    Q+    EA+ LF KM  +  L P+
Sbjct: 455 TMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRI-NLKPD 513

Query: 386 ATTMSSVVPACVR-------SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             T   V+ AC            F   + +H     +      Y    ++D+  R G +E
Sbjct: 514 HITYVGVLSACTHVGLVEQGKSYFNLMKNVHN----IEPTSSHYA--CMIDLLGRAGLLE 567

Query: 439 ISKTIFDDMEVR-DTVSWNTMIT 460
            +     +M +  D V+W ++++
Sbjct: 568 EAYNFIRNMPIEPDVVAWGSLLS 590



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 201/440 (45%), Gaps = 64/440 (14%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           + TG    A+ L +++ +  +F  + ++  +     ++  RRVFD I       W  MI 
Sbjct: 59  VKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIV 118

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY      + A+  F++M   +G+ P   T ++V+ +C  ++A    + +H   +KLG  
Sbjct: 119 GYNHLGLFKSAVHAFLRMVS-SGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQS 177

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
               V N+L++MY++ G   ++K +FD M ++DT +WNTMI+ +    Q   AL L  +M
Sbjct: 178 GVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM 237

Query: 479 QNMEEEKNRNNV--------YDLD--ET---VLRP---KPNSITLMTVLPGCGALSALAK 522
            +  +  + N++        YD+   ET   +L+    KP+  TL +VL  C    +L  
Sbjct: 238 TD-PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKL 296

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR---------------------- 560
           GK+IHA+ +R  +     VG+AL+ MYAK G +  A R                      
Sbjct: 297 GKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGY 356

Query: 561 -----------VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
                      +FD +  R+V+ W  +I+ Y  +G   + L L + M+ EG      KPN
Sbjct: 357 FKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGP-----KPN 411

Query: 610 EVTFIALFAACSHSGMVSEGMDLF---YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
             T  A+ +  S    +  G  L     ++++   +         ++ +  R+G ++DA 
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVG----NALITMYSRSGSIKDAR 467

Query: 667 QLINMMPPEFDKAGAWSSLL 686
           ++ N +    D    W+S++
Sbjct: 468 KIFNHICSYRDTL-TWTSMI 486



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 59/329 (17%)

Query: 408 IHGHAIKLGLGRDRYV----QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           IH   IK GL   RY+     N L+++Y + G    +  +FD+M ++ T SWNT+++ + 
Sbjct: 34  IHARIIKHGL---RYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--------------KPNSITLMT 509
             G    A  +  E+   +       +   +   L                 P   T   
Sbjct: 91  KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
           VL  C A  AL  GK++H++ ++   +  V V ++L++MYAKCG    A+ VFD M ++ 
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210

Query: 569 ------------------------------NVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                                         ++++WN II  Y   G     LE    M+ 
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLG 657
             S    +KP++ T  ++ +AC++   +  G  +  + ++ D  I  +  +   ++ +  
Sbjct: 271 SSS----LKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN--ALISMYA 324

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           ++G VE A++++ +         A++SLL
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLL 353



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 30/169 (17%)

Query: 523 GKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           G+ IHA  I++ L    V + + L+++Y K G  + A R+FD MP++   +WN I+ A+ 
Sbjct: 31  GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G       +   +          +P+ V++  +    +H G+    +  F +M    G
Sbjct: 91  KAGNLDSARRVFDEI---------PQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSS-G 140

Query: 642 IEPSPDHYACV-------------------VDLLGRAGKVEDAYQLINM 671
           I P+   +  V                   V  LG++G V  A  L+NM
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNM 189


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/750 (35%), Positives = 424/750 (56%), Gaps = 70/750 (9%)

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           ++AFR        P  F L ++    S  ++ D +   R+V     ++ + N +  N L+
Sbjct: 36  IKAFR-------NPEIFLLNNLV---SAYAKFDRITYARRVFD---QMPQRNLYSWNTLL 82

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDG 283
           + Y+KL  + + + +F +   RD+VSWN+++S+ +     L++V     M   G    + 
Sbjct: 83  SSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNR 142

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++++++L   S    +  G ++H + ++        FVGS LVDMY     V C R+ FD
Sbjct: 143 IALSTMLILASKQGCVHLGLQVHGHVVKFGFQ-SYVFVGSPLVDMYSKTGLVFCARQAFD 201

Query: 344 FISDKKIAL-------------------------------WNAMITGYGQNEYDEEALML 372
            + +K + +                               W AMI G+ QN  D EA+ L
Sbjct: 202 EMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDL 261

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M  +  L  +  T  SV+ AC    A  + + +H + I+     + +V +AL+DMY 
Sbjct: 262 FREMR-LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYC 320

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           +   I+ ++T+F  M  ++ VSW  M+ GY   G   +A+ +  +MQN       N +  
Sbjct: 321 KCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN-------NGI-- 371

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                   +P+  TL +V+  C  L++L +G + H  A+ + L + + V +ALV +Y KC
Sbjct: 372 --------EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKC 423

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +  + R+F  M   + ++W  ++  Y   G+  E L L ++M+A G      KP++VT
Sbjct: 424 GSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG-----FKPDKVT 478

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           FI + +ACS +G+V +G  +F  M  ++ I P  DHY C++DL  RAG++E+A + IN M
Sbjct: 479 FIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKM 538

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P   D  G W+SLL +CR H+N+EIG+ AA++L  LEP   + Y+LLS+IY++   W++ 
Sbjct: 539 PFSPDAIG-WASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEV 597

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
            ++RK M++ G+RKEPGCSWI++ +++H F A D S+  S+Q++  LE L+ +M +EGYV
Sbjct: 598 ANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYV 657

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           PD + VLH+V++ EK  +L  HSEKLAIAFG++  PPG  IRV KNLRVC DCH ATK+I
Sbjct: 658 PDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYI 717

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SKI  REI++RD  RFH FK+G CSCGD+W
Sbjct: 718 SKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 190/401 (47%), Gaps = 43/401 (10%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--------------------------- 127
           LG Q+H HVVK+G+  S V V + LV+MY K G                           
Sbjct: 160 LGLQVHGHVVKFGFQ-SYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGL 218

Query: 128 ---SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
              S + D  ++F  + EKD +SW +MIA   + G    A++ FR M   N+E   +T  
Sbjct: 219 MRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFG 278

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
           SV  AC  +     L+ G+QVH   +R   + N F+ +AL+ MY K   +  A+T+F+  
Sbjct: 279 SVLTACGGVM---ALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM 335

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             +++VSW  ++    QN    EAV     M   GI+PD  ++ SV+ +C++L  L+ G 
Sbjct: 336 NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGA 395

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           + H  AL +  LI    V +ALV +Y  C  +E   R+F  +S      W A+++GY Q 
Sbjct: 396 QFHCRALVSG-LISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQF 454

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK---LGLGRD 420
               E L LF  M    G  P+  T   V+ AC R+        I    IK   +    D
Sbjct: 455 GKANETLRLFESM-LAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIED 513

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
            Y    ++D++SR GR+E ++   + M    D + W ++++
Sbjct: 514 HYT--CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 151/301 (50%), Gaps = 6/301 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++   REAI  + EM   +++ D + F +VL A  G+  L  GKQ+HA++
Sbjct: 241 SWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYI 300

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y   ++ V + LV+MY KC S +     VF ++  K+ VSW +M+    + G  + 
Sbjct: 301 IRTDYQ-DNIFVGSALVDMYCKCKS-IKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEE 358

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A++ F  M  + +EP  FTL SV  +C+NL+    L  G Q H  +L  G  +   + NA
Sbjct: 359 AVKIFCDMQNNGIEPDDFTLGSVISSCANLA---SLEEGAQFHCRALVSGLISFITVSNA 415

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++D+  LF      D VSW  +VS  +Q  K  E +     M   G KPD
Sbjct: 416 LVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPD 475

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+   VL ACS   ++  G +I    ++   +I      + ++D++     +E  R+  
Sbjct: 476 KVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFI 535

Query: 343 D 343
           +
Sbjct: 536 N 536



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 38/256 (14%)

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           D + IH H IK     + ++ N L+  Y++  RI  ++ +FD M  R+  SWNT+++ Y+
Sbjct: 27  DTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYS 86

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV-------------------LRPKP-- 502
                   L  L EM+ +       ++   +  +                   L   P  
Sbjct: 87  -------KLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFN 139

Query: 503 -NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
            N I L T+L        +  G ++H + ++    + V VGS LVDMY+K G +  AR+ 
Sbjct: 140 LNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQA 199

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD MP +NV+ +N +I         ++  +L  +M  + S         +++ A+ A  +
Sbjct: 200 FDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDS---------ISWTAMIAGFT 250

Query: 622 HSGMVSEGMDLFYKMK 637
            +G+  E +DLF +M+
Sbjct: 251 QNGLDREAIDLFREMR 266



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  L      K+IH + I+     ++ + + LV  YAK   + +ARRVFD MP RN+ +W
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 574 NVIIMAY 580
           N ++ +Y
Sbjct: 79  NTLLSSY 85


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/706 (36%), Positives = 408/706 (57%), Gaps = 51/706 (7%)

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           +F L S+  AC+  S  D   LGR++HG + + G   + F+ NALM MY K G +  A+ 
Sbjct: 88  NFILPSLLKACAQASSGD---LGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARL 144

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F    +RD+VSW T++    ++  F EA+  +R+M   G+K  GV++ S++    +L  
Sbjct: 145 VFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLD 204

Query: 299 LDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           + +G+ +H Y +RN  D  ++ S   +AL+DMYC    +   +R+FD +S + +  W  M
Sbjct: 205 MKSGRAVHGYIVRNVGDEKMEVSMT-TALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVM 263

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I G  ++   +E    F +M E   L+PN  T+ S++  C         +  H + ++ G
Sbjct: 264 IAGCIRSCRLDEGAKNFNRMLE-EKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNG 322

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
            G    +  AL+DMY + G++  ++ +F+ ++ +D   W+ +I+ Y           L  
Sbjct: 323 FGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFV 382

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           EM N       N+V          KPN++T++++L  C    AL  GK  HAY  R+ L 
Sbjct: 383 EMLN-------NDV----------KPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLE 425

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            DV++ +AL++MYAKCG +  AR +F+    R++  WN ++  + MHG G+E LEL   M
Sbjct: 426 VDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEM 485

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
            + G     V+PN++TF+++F ACSHSG++                    +HY C+VDLL
Sbjct: 486 ESHG-----VEPNDITFVSIFHACSHSGLM--------------------EHYGCLVDLL 520

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG +++A+ +I  MP   +    W +LL AC++H+N+ +GE+AA+ +  L+P    + 
Sbjct: 521 GRAGHLDEAHNIIENMPMRPNTI-IWGALLAACKLHKNLALGEVAARKILELDPQNCGYS 579

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VL SNIY+SA+ W+    VR+ M   G++KEPG SWIE    +H F +GD +  Q+ +++
Sbjct: 580 VLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVY 639

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
             +  +  ++R+ GY P+T+ VL N++EEEKE+ L  HSEKLA AFG+++T PGT IR+ 
Sbjct: 640 EMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIV 699

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLR+C+DCH ATK +SKI  R II+RD  RFHHF  G CSC  YW
Sbjct: 700 KNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 303/636 (47%), Gaps = 76/636 (11%)

Query: 20  QTHQPPA---TTATSLPLPG-SQTR-CKESWIESLRSEARSNQFREAILS-YIEMTRSDI 73
           QTHQ  A    T    P P  SQ+    E+    L S   +N   +A  + Y+ M  +D 
Sbjct: 24  QTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDA 83

Query: 74  QP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
              DNF  P++LKA A      LG+++H    K G+  S V V N L+NMY KCG  +  
Sbjct: 84  AALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFA-SDVFVCNALMNMYEKCGC-LVS 141

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              VFD++ E+D VSW +M+    R   +  AL   R M +  V+ S   L+S+     N
Sbjct: 142 ARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGN 201

Query: 193 LSRRDGLRLGRQVHGNSLR-VGE--WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           L     ++ GR VHG  +R VG+      +  AL+ MY K G +  A+ LF     R +V
Sbjct: 202 LL---DMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVV 258

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SW  +++   ++ +  E      +M    + P+ +++ S++  C  +  LD GK  HAY 
Sbjct: 259 SWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYL 318

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           LRN   +  + V +AL+DMY  C +V   R +F+ +  K + +W+ +I+ Y      ++ 
Sbjct: 319 LRNGFGMSLALV-TALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQV 377

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
             LF++M     + PN  TM S++  C  + A    +  H +  + GL  D  ++ AL++
Sbjct: 378 FNLFVEMLN-NDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALIN 436

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY++ G + I++++F++   RD   WNTM+ G+++ G   +AL L  EM++   E     
Sbjct: 437 MYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVE----- 491

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                       PN IT +++   C            H+  + +           LVD+ 
Sbjct: 492 ------------PNDITFVSIFHACS-----------HSGLMEHY--------GCLVDLL 520

Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH-----GE--GQEVLEL--------- 592
            + G L+ A  + + MP+R N I W  ++ A  +H     GE   +++LEL         
Sbjct: 521 GRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSV 580

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           LK+ +   ++    + N+VT  ++  A SHSGM  E
Sbjct: 581 LKSNIYASAK----RWNDVT--SVREAMSHSGMKKE 610



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           ++  L ++L  C   S+   G+E+H +A +N  A+DV V +AL++MY KCGCL  AR VF
Sbjct: 87  DNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVF 146

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D MP R+V++W  ++  Y       E L L++ M   G     VK + V  I+L A   +
Sbjct: 147 DQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVG-----VKLSGVALISLIAVFGN 201

Query: 623 SGMVSEGMDLFYKMKDDYGIEP-SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
              +  G  +   +  + G E         ++D+  + G +  A +L + +        +
Sbjct: 202 LLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKR--SVVS 259

Query: 682 WSSLLGAC 689
           W+ ++  C
Sbjct: 260 WTVMIAGC 267


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/763 (36%), Positives = 418/763 (54%), Gaps = 65/763 (8%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FDRI   +   WN+M+    +    + AL  +++M+ +NV P ++T   V  AC+   
Sbjct: 96  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
              G   G+++H + L+VG + + ++ N L+ MYA  G + DA+ LF      D VSWN+
Sbjct: 156 LEFG---GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 212

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           I++   +     EA +   QM  R I      +AS                         
Sbjct: 213 ILAGYVKKGDVEEAKLIFDQMPQRNI------VAS------------------------- 241

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
                    ++++ +     +V    ++F+ + +K +  W+A+I+GY QN   EEAL++F
Sbjct: 242 ---------NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           I+M    G+  +   + SV+ AC         + IHG  I++G+     +QNAL+ MYS 
Sbjct: 293 IEMN-ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG 351

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN------------- 480
            G I  ++ +F+     D +SWN+MI+G   CG    A  L   M               
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411

Query: 481 MEEEKNRNNVYDLDETVL-RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
            + +     +    E  L + +P+   L++V+  C  L+AL +GK +HAY  +N L  +V
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNV 471

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           ++G+ L+DMY KCGC+  A  VF+ M  + V +WN +I+   ++G  +  L++   M   
Sbjct: 472 ILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNN 531

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     V PNE+TF+ +  AC H G+V EG   F  M + +GIEP+  HY C+VDLLGRA
Sbjct: 532 G-----VIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRA 586

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G + +A +LI  MP   D A  W +LLGAC+ H + E+GE   + L  L+PD    +VLL
Sbjct: 587 GLLNEAEKLIESMPMAPDVA-TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLL 645

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNI++S   W+  ++VR  MK+ GV K PGCS IE    +H+FLAGD +H    ++ G L
Sbjct: 646 SNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGML 705

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
             +++R++ EGY PDT+ V  +++EEEKET L  HSEKLAIAFG+L   P T IR+ KNL
Sbjct: 706 NEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNL 765

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R+CNDCH A K ISK  +REI++RD  RFH+FK G CSC DYW
Sbjct: 766 RICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 173/591 (29%), Positives = 282/591 (47%), Gaps = 108/591 (18%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL-GKQIHAHV 103
           W   +R+  +SN   +A+L Y  M ++++ PDN+ +P V++A A ++ L   GK+IH HV
Sbjct: 109 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHV 167

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S V V NTL+NMY  CG +M D  K+FD     D VSWNS++A   + G  + 
Sbjct: 168 LKVGFD-SDVYVQNTLINMYAVCG-NMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEE 225

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A   F  M   N+  S                                         N++
Sbjct: 226 AKLIFDQMPQRNIVAS-----------------------------------------NSM 244

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + +  K+G+V +A  LF   +++D+VSW+ ++S   QN  + EA++   +M   G++ D 
Sbjct: 245 IVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE 304

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYC----------- 330
           V + SVL AC+HL ++ TGK IH   +R  I    S+V   +AL+ MY            
Sbjct: 305 VVVVSVLSACAHLSIVKTGKMIHGLVIRMGI---ESYVNLQNALIHMYSGSGEIMDAQKL 361

Query: 331 --------------------NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
                                C  VE  R +FD + +K I  W+A+I+GY Q++   E L
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF +M ++  + P+ T + SV+ AC    A    + +H +  K GL  +  +   L+DM
Sbjct: 422 ALFHEM-QLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDM 480

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y + G +E +  +F+ ME +   SWN +I G  + G    +L +  EM+N       N V
Sbjct: 481 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN-------NGV 533

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNMLATDVVVGSALVDMY 549
                      PN IT M VL  C  +  + +G+   A  I ++ +  +V     +VD+ 
Sbjct: 534 I----------PNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 583

Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE-------GQEVLEL 592
            + G LN A ++ + MP+  +V TW  ++ A   HG+       G++++EL
Sbjct: 584 GRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIEL 634



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 43/295 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  + EA++ +IEM  + ++ D     +VL A A +  +  GK IH  V
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   S V + N L++MY   G  M D  K+F+     DQ+SWNSMI+   + G  + 
Sbjct: 331 IRMGIE-SYVNLQNALIHMYSGSGEIM-DAQKLFNGSHNLDQISWNSMISGCMKCGSVEK 388

Query: 164 A-------------------------------LEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A                               L  F  M    + P    LVSV  AC++
Sbjct: 389 ARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTH 448

Query: 193 LSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           L+  D    G+ VH     N L+V   N  +   L+ MY K G V++A  +F   E++ +
Sbjct: 449 LAALDQ---GKWVHAYIRKNGLKV---NVILGTTLLDMYMKCGCVENALEVFNGMEEKGV 502

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            SWN ++  L+ N     ++    +M   G+ P+ ++   VL AC H+ ++D G+
Sbjct: 503 SSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 557



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 155/370 (41%), Gaps = 84/370 (22%)

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           ++ S  IFD +E  +   WNTM+  Y        AL+L + M        +NNV      
Sbjct: 91  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMV-------KNNV------ 137

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P++ T   V+  C        GKEIH + ++    +DV V + L++MYA CG + 
Sbjct: 138 ----GPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMR 193

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL-----KNMVAEGS------RGGE 605
            AR++FD  PV + ++WN I+  Y   G+ +E   +      +N+VA  S      + G+
Sbjct: 194 DARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQ 253

Query: 606 V----------------------------------------------KPNEVTFIALFAA 619
           V                                              + +EV  +++ +A
Sbjct: 254 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 313

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+H  +V  G  + + +    GIE   +    ++ +   +G++ DA +L N      D+ 
Sbjct: 314 CAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN-GSHNLDQI 371

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
            +W+S++  C    +VE     A+ LF  + E D+ S   ++S  Y+    + + + +  
Sbjct: 372 -SWNSMISGCMKCGSVE----KARALFDVMPEKDIVSWSAVISG-YAQHDCFSETLALFH 425

Query: 738 KMKEMGVRKE 747
           +M+   +R +
Sbjct: 426 EMQLGQIRPD 435


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/818 (35%), Positives = 432/818 (52%), Gaps = 50/818 (6%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           +F   A ++ V     ++ GK +H+ +           +A++LV MY +CGS +     V
Sbjct: 26  SFDSAAAVRLVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGS-LESAIDV 84

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           F +I  K  V W  +I+     G    A+  F  +L   +   +   VSV  ACS+    
Sbjct: 85  FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSS---E 141

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTI 254
           + L  GR +H  ++  G      + +AL++MY + G + DA  LF   E   D+V WN +
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRN 312
           +++ SQN    EA+    +M   GI PD V+  SV  ACS    L     K  HA  L  
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHA-CLDE 260

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L  +  V +ALV+ Y  C E++C R+ F  + ++    W +MI  + Q  +       
Sbjct: 261 TGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLAVETF 320

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
              + E  G+ P  +T+ + +  C   E       +   A ++G+  D  +   L+  Y+
Sbjct: 321 HAMLLE--GVVPTRSTLFAALEGC---EDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYA 375

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNT-----MITGYTICGQHGDALMLLREMQNMEEEKNR 487
           R    E +  +F     R+   W+      MI  Y  C                   ++R
Sbjct: 376 RCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQC-------------------RDR 413

Query: 488 NNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHA-YAIRNMLATDVVVGSA 544
            + + L    +     P+ I  +T L  C +L+AL++G++IHA  A    L  DV +G+A
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           +V MY +CG L  AR  FD MP R+ I+WN ++ A   HG  ++  +L + M+ EG    
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEG---- 529

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
                 + F+ L +AC+H+G+V  G + F  M  D+G+ P+ +HY C+VDLLGR G++ D
Sbjct: 530 -FDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLAD 588

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A+ ++  MP   D A  W +L+GACRI+ + E G  AA+ +  L  D  + YV L NIYS
Sbjct: 589 AHGIVQAMPVPPD-AATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYS 647

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           +A  WD A  VRK M ++G+RK PG S IE   ++H+F+  D SH QSE ++  LE +  
Sbjct: 648 AAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMG 707

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
            + + GY   T  VLH+V EE+KE LL  HSEKLAIAFG+++TP G+T+RV KNLRVC D
Sbjct: 708 AIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVD 767

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH A+KFISK+  REI++RDVRRFHHFK+G CSCGDYW
Sbjct: 768 CHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 189/435 (43%), Gaps = 29/435 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL--SLGKQIHAH 102
           W   + + +++   REA+  +  M +  I PD   F +V KA +    L  S  K  HA 
Sbjct: 198 WNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHAC 257

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + + G G S V VA  LVN Y +CG ++    K F  + E++ VSW SMIA   + G   
Sbjct: 258 LDETGLG-SDVVVATALVNAYARCG-EIDCARKFFAEMPERNAVSWTSMIAAFTQIGHL- 314

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           LA+E F  ML   V P+  TL +    C +      LR+ R V   +  +G   +  I+ 
Sbjct: 315 LAVETFHAMLLEGVVPTRSTLFAALEGCED------LRVARLVEAIAQEIGVVTDVAIVT 368

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            L+  YA+    +DA  +F + E+   D      +++  +Q                RGI
Sbjct: 369 DLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD +   + L AC+ L  L  G++IHA    +  L  +  +G+A+V MY  C  +   R
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             FD +  +    WNAM++   Q+   E+   LF  M +  G         +++ AC  +
Sbjct: 489 DAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQ-EGFDAERIAFLNLLSACAHA 547

Query: 400 -------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RD 451
                  E F    G HG    +    + Y    ++D+  R GR+  +  I   M V  D
Sbjct: 548 GLVKAGCEHFSAMTGDHG----VVPATEHY--GCMVDLLGRKGRLADAHGIVQAMPVPPD 601

Query: 452 TVSWNTMITGYTICG 466
             +W  ++    I G
Sbjct: 602 AATWMALMGACRIYG 616


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/662 (39%), Positives = 380/662 (57%), Gaps = 62/662 (9%)

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            LM  YA  G     + +F     +++V +N ++ S   N  + +A++  + MA  GI PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCREVECGRR 340
              +   VL A S  E L  G +IHA  +R  + + N FVG+ L+ MY  C C    C  R
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDL-NVFVGNGLISMYGKCGCLVEAC--R 1182

Query: 341  VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            V D +  + +  WN+++ G  +N   ++AL +  +ME + GL P+A TM+S++PA     
Sbjct: 1183 VLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME-LLGLKPDAGTMASLLPA----- 1236

Query: 401  AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                                  V N  +D       +   K +F  +  +  VSWN MI 
Sbjct: 1237 ----------------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIA 1268

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
             Y       +A+ +  +M+              D  V    P++I++ +VLP CG LSAL
Sbjct: 1269 VYMNNSMPAEAVDIFLQME--------------DHAV---DPDAISIASVLPACGDLSAL 1311

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
              G+ IH Y +R  L  ++++ +AL+DMYAKCGCL +AR VFD M  R+V++W  +I AY
Sbjct: 1312 LLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAY 1371

Query: 581  GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            GM+G+G++ + L   M   G     + P+ + F+++ +ACSH+G++ EG   F  M ++ 
Sbjct: 1372 GMNGKGRDAVSLFSRMQDLG-----LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC 1426

Query: 641  GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
             I P  +H+ C+VDLLGRAG+V++AY  I  MP E ++   W +LL ACR++ N+ IG +
Sbjct: 1427 KIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER-VWGALLSACRVYSNMIIGLL 1485

Query: 701  AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            AA  LF L P+ + +YVLLSNIY+ A  W+    VR  MK  G++K PG S  E  + +H
Sbjct: 1486 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 1545

Query: 761  KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
             FLAGD SH QS+Q++  L+ L  +M++ GYVP+T   LH+V EE+KE  L  HSEKLAI
Sbjct: 1546 TFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAI 1605

Query: 821  AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            AF ILNT PG+ IR+ KNLRVC DCH A K ISKI  REI +RD  RFHHF NG CSCGD
Sbjct: 1606 AFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGD 1665

Query: 881  YW 882
            YW
Sbjct: 1666 YW 1667



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 180/348 (51%), Gaps = 39/348 (11%)

Query: 49   LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
            +RS   ++ + +A+L +  M    I PD++ +P VLKA +G +DL +G QIHA VV+ G 
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 1157

Query: 109  GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             L +V V N L++MYGKCG  + +  +V D +  +D VSWNS++A   R G++D ALE  
Sbjct: 1158 DL-NVFVGNGLISMYGKCGC-LVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVC 1215

Query: 169  RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
            + M    ++P + T+ S+  A +N                                    
Sbjct: 1216 KEMELLGLKPDAGTMASLLPAVTNTC---------------------------------- 1241

Query: 229  KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
             L  V   K +F    ++ LVSWN +++    N    EAV    QM    + PD +SIAS
Sbjct: 1242 -LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIAS 1300

Query: 289  VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
            VLPAC  L  L  G+ IH Y +R   L  N  + +AL+DMY  C  +E  R VFD +  +
Sbjct: 1301 VLPACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 1359

Query: 349  KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +  W +MI+ YG N    +A+ LF +M+++ GL P++    SV+ AC
Sbjct: 1360 DVVSWTSMISAYGMNGKGRDAVSLFSRMQDL-GLNPDSIAFVSVLSAC 1406



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 239/495 (48%), Gaps = 67/495 (13%)

Query: 92   DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            D+   K++H+ +       S+ ++   L+  Y  CG + W    +FD I +K+ V +N M
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCG-EPWSTRHIFDEIPKKNVVFFNVM 1097

Query: 152  IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
            I +      +  AL  F+ M    ++P  +T   V  A S     + L +G Q+H   +R
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSG---SEDLWVGMQIHAAVVR 1154

Query: 212  VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            VG + N F+ N L++MY K G + +A  +      RD+VSWN++V+  ++N +F +A+  
Sbjct: 1155 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEV 1214

Query: 271  LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             ++M L G+KPD  ++AS+LPA +                 N  L + SFV         
Sbjct: 1215 CKEMELLGLKPDAGTMASLLPAVT-----------------NTCLDNVSFV--------- 1248

Query: 331  NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
                    + +F  +++K +  WN MI  Y  N    EA+ +F++ME+ A + P+A +++
Sbjct: 1249 --------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA-VDPDAISIA 1299

Query: 391  SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
            SV+PAC    A      IH + ++  L  +  ++NAL+DMY++ G +E ++ +FD M+ R
Sbjct: 1300 SVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 1359

Query: 451  DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
            D VSW +MI+ Y + G+  DA+ L   MQ+                 L   P+SI  ++V
Sbjct: 1360 DVVSWTSMISAYGMNGKGRDAVSLFSRMQD-----------------LGLNPDSIAFVSV 1402

Query: 511  LPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFDLM 565
            L  C     L +G+    Y  + M     +V        +VD+  + G ++ A      M
Sbjct: 1403 LSACSHAGLLDEGR----YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQM 1458

Query: 566  PVR-NVITWNVIIMA 579
            P+  N   W  ++ A
Sbjct: 1459 PMEPNERVWGALLSA 1473



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 5/183 (2%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
            EA+  +++M    + PD  +  +VL A   +  L LG++IH +VV+      ++ + N L
Sbjct: 1278 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQ-PNLLLENAL 1336

Query: 120  VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            ++MY KCG   +   +VFD++  +D VSW SMI+     GK   A+  F  M    + P 
Sbjct: 1337 IDMYAKCGCLEY-AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 1395

Query: 180  SFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKT 238
            S   VSV  ACS+    D  R   ++     + V     F+   ++ +  + G+VD+A  
Sbjct: 1396 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAYG 1453

Query: 239  LFK 241
              K
Sbjct: 1454 FIK 1456



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 33/216 (15%)

Query: 524  KEIHA-YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            K++H+   I + L ++  +G  L+  YA CG     R +FD +P +NV+ +NV+I +Y  
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103

Query: 583  HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----------HSGMVSEGMD 631
            +    + L + KNM   G     + P+  T+  +  A S           H+ +V  G+D
Sbjct: 1104 NHLYSDALLVFKNMAGHG-----IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 1158

Query: 632  LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-R 690
            L   + +             ++ + G+ G + +A ++++ MP       +W+SL+  C R
Sbjct: 1159 LNVFVGNG------------LISMYGKCGCLVEACRVLDZMPCR--DVVSWNSLVAGCAR 1204

Query: 691  IHQNVEIGEIAAQ-NLFLLEPDVASHYVLLSNIYSS 725
              Q  +  E+  +  L  L+PD  +   LL  + ++
Sbjct: 1205 NGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT 1240


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/612 (40%), Positives = 372/612 (60%), Gaps = 29/612 (4%)

Query: 274 MALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           MA++G  IK DG ++  +L  C +   +  G+ +HA+ ++   L    ++ + L+ +Y  
Sbjct: 1   MAIQGPEIKFDGYNM--LLNECVNKRAVREGQRVHAHMIKTCYL-PPVYLSTRLIILYTK 57

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  + C R VFD + ++ +  W AMI+GY Q  +  EAL LF++M   +   PN  T ++
Sbjct: 58  CECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLR-SDTEPNEFTFAT 116

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ +C     F     IH H  K       +V ++L+DMY++ GRI  ++ +F+ +  RD
Sbjct: 117 VLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERD 176

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VS   +I+GY   G   +AL L   +Q       R  +            N +T  ++L
Sbjct: 177 VVSCTAIISGYAQLGLDEEALELFCRLQ-------REGM----------SSNYVTYASLL 219

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
                L+AL  GK++H++ +R  L   VV+ ++L+DMY+KCG LN+AR++F+ MPVR VI
Sbjct: 220 TALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVI 279

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WN +++ Y  HG+G EV++L K M  E     +VKP+ VTF+A+ + CSH G+  +G++
Sbjct: 280 SWNAMLVGYSKHGKGIEVVKLFKLMREEN----KVKPDSVTFLAVLSGCSHGGLEDKGLE 335

Query: 632 LFYKMKDDYG-IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
           +F +M +    IE   +HY CV+DLLGRAG+VE+A++LI  MP E   A  W SLLGACR
Sbjct: 336 MFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFE-PTAAIWGSLLGACR 394

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           +H N  IGE     L  +EP+ A +YV+LSN+Y+SA  W+   +VR+ M E  V KEPG 
Sbjct: 395 VHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGR 454

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SWIE    IH F A D SH + E++   +  L  + ++ GYVPD SCVL++V+EE+KE +
Sbjct: 455 SWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKI 514

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L GHSEKLA+AFG+++T  G  +RV KNLR+C DCH   KF+SK+  R++ +RD  RFHH
Sbjct: 515 LLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHH 574

Query: 871 FKNGTCSCGDYW 882
              G CSCGDYW
Sbjct: 575 VAGGICSCGDYW 586



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 200/378 (52%), Gaps = 30/378 (7%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+++HAH++K  Y L  V ++  L+ +Y KC   +     VFD + E++ VSW +MI+  
Sbjct: 29  GQRVHAHMIKTCY-LPPVYLSTRLIILYTKCEC-LGCARHVFDEMRERNVVSWTAMISGY 86

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGE 214
            + G    AL  F  ML S+ EP+ FT  +V  +C+  S   G  LGRQ+H +   R  E
Sbjct: 87  SQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFS---GFELGRQIHSHIFKRNYE 143

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+ ++L+ MYAK GR+ +A+ +F+   +RD+VS   I+S  +Q     EA+    ++
Sbjct: 144 NHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRL 203

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND----ILIDNSFVGSALVDMYC 330
              G+  + V+ AS+L A S L  LD GK++H++ LR +    +++ NS     L+DMY 
Sbjct: 204 QREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS-----LIDMYS 258

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +   R++F+ +  + +  WNAM+ GY ++    E + LF  M E   + P++ T  
Sbjct: 259 KCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFL 318

Query: 391 SVVPACVRSEAFPDKEGIH--------GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
           +V+  C  S    + +G+         G  I+ G+  + Y    ++D+  R GR+E +  
Sbjct: 319 AVLSGC--SHGGLEDKGLEMFDEMMNGGDEIEAGI--EHY--GCVIDLLGRAGRVEEAFE 372

Query: 443 IFDDMEVRDTVS-WNTMI 459
           +   M    T + W +++
Sbjct: 373 LIKKMPFEPTAAIWGSLL 390



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 140/264 (53%), Gaps = 7/264 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++     EA+  +++M RSD +P+ F F  VL +  G     LG+QIH+H+
Sbjct: 78  SWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHI 137

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K  Y  + + V ++L++MY K G  + +   VF+ + E+D VS  ++I+   + G  + 
Sbjct: 138 FKRNYE-NHIFVGSSLLDMYAKAGR-IHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F  +    +  +  T  S+  A S L+  D    G+QVH + LR    +   + N+
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDH---GKQVHSHVLRCELPFYVVLQNS 252

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
           L+ MY+K G ++ A+ +F +   R ++SWN ++   S++ K +E V   + M     +KP
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312

Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
           D V+  +VL  CSH  + D G E+
Sbjct: 313 DSVTFLAVLSGCSHGGLEDKGLEM 336


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/797 (34%), Positives = 443/797 (55%), Gaps = 41/797 (5%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK  HAH++K  +    + + N  +N+Y K G +M +  K+FDR++E+  +S+N +I+  
Sbjct: 28  GKLAHAHMIKTAFN-PCLFLLNNFLNLYSKWG-EMGNAQKLFDRMSERSVISYNILISGY 85

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G +  A+  F     + ++   F+   V  AC  +       LG+ +HG ++  G  
Sbjct: 86  GGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKD---FALGKVIHGLAIVCGLG 142

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
              F+ N L+ MY K  R+D A+ LF+S ++ D VSWN++++  ++   + E +  L +M
Sbjct: 143 QQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKM 202

Query: 275 ALRGIKPDGVSIASVLPAC--SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
              G++ +  ++ S L +C  +   M+  GK +H Y ++  + +D   VG+AL+DMY   
Sbjct: 203 HHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD-IVVGTALLDMYAKT 261

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDE-----EALMLFIKMEEVAGLWPNAT 387
             +    ++F    ++ + ++NAMI G+ Q E  +     EAL LF +M+   G+ P+  
Sbjct: 262 GYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQR-QGIKPSDF 320

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T SS++  C   EAF   + IH H  K  +  D ++ + L+++YS +G  E     F+  
Sbjct: 321 TFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNST 380

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
              D VSW TMI GY   GQ   AL L  E+                      KP+   +
Sbjct: 381 PKLDIVSWTTMIAGYAQNGQFESALALFYEL-----------------LASGKKPDEFII 423

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            T+L  C  ++A   G+++H YA++  + T  +V ++ + MYAK G L+ A+  F+ +  
Sbjct: 424 TTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKN 483

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            +V++W+V+I +   HG  ++ + L + M + G     + PN++TF+ +  ACSH G+V 
Sbjct: 484 PDVVSWSVMICSNAQHGHAKDAINLFELMKSYG-----IHPNQITFLGVLTACSHGGLVE 538

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF-DKAGAWSSLL 686
           EG+  +  MK DY ++ +  H  C+VDLL RAG++ DA   I  +   F D    W +LL
Sbjct: 539 EGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFI--LNSGFGDHPVMWRTLL 596

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
             CRI++++  G+  A+ L  L+P  +S YVLL NIY+ A +   A  +R+ MK+ G+RK
Sbjct: 597 SGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRK 656

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           EPG SWIE G+E+H F+ GD SH  S+ ++  LE + E+ RK GY+      +    +E 
Sbjct: 657 EPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEV 716

Query: 807 KETL-LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
           K TL +  HSEKLA++FGI++ PP   ++V KNLRVC+DCH   K IS +E REIILRD 
Sbjct: 717 KGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDS 776

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFHHFK G+CSC DYW
Sbjct: 777 LRFHHFKEGSCSCNDYW 793



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 261/505 (51%), Gaps = 29/505 (5%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + +AI  + E   + ++ D F++  VL A   I+D +LGK IH   +  G G   V + N
Sbjct: 91  YHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLG-QQVFLTN 149

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            L++MY KC   +     +F+   E D VSWNS+I    R G ++  L+    M ++ + 
Sbjct: 150 LLIDMYCKC-ERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLR 208

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
            ++FTL S   +C  L+  + +  G+ +HG +++ G + +  +  AL+ MYAK G + DA
Sbjct: 209 LNAFTLGSALKSCY-LNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDA 267

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKF-----LEAVMFLRQMALRGIKPDGVSIASVLP 291
             LF++  ++++V +N +++   Q +        EA+    QM  +GIKP   + +S++ 
Sbjct: 268 IQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIK 327

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
            C+H+E  + GK+IHA+  +++I  D  F+GS L+++Y      E   + F+      I 
Sbjct: 328 ICNHIEAFEYGKQIHAHICKHNIQSDE-FIGSTLIELYSLLGSTEDQLKCFNSTPKLDIV 386

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W  MI GY QN   E AL LF ++   +G  P+   +++++ AC    A    E +HG+
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYEL-LASGKKPDEFIITTMLSACADVAAERSGEQVHGY 445

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           A+K G+G    VQN+ + MY++ G ++ +K  F++++  D VSW+ MI       QHG A
Sbjct: 446 AVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSN---AQHGHA 502

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
                        K+  N+++L ++     PN IT + VL  C     + +G   +    
Sbjct: 503 -------------KDAINLFELMKS-YGIHPNQITFLGVLTACSHGGLVEEGLRYYESMK 548

Query: 532 RNM-LATDVVVGSALVDMYAKCGCL 555
           ++  +  +V   + +VD+ ++ G L
Sbjct: 549 KDYDMKINVKHCTCIVDLLSRAGRL 573



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 12/218 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ QF  A+  + E+  S  +PD F    +L A A +     G+Q+H + 
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA 446

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV-FDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G G  ++ V N+ ++MY K G+   D  K+ F+ I   D VSW+ MI +  + G   
Sbjct: 447 VKTGIGTLAI-VQNSQISMYAKSGN--LDSAKITFEEIKNPDVVSWSVMICSNAQHGHAK 503

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGN-SLRVGEWNTFIM 220
            A+  F +M    + P+  T + V  ACS+     +GLR    +  +  +++   N    
Sbjct: 504 DAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKI---NVKHC 560

Query: 221 NALMAMYAKLGRVDDAKT--LFKSFEDRDLVSWNTIVS 256
             ++ + ++ GR+ DAK   L   F D   V W T++S
Sbjct: 561 TCIVDLLSRAGRLLDAKNFILNSGFGDHP-VMWRTLLS 597


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/665 (38%), Positives = 376/665 (56%), Gaps = 26/665 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+M   +      G V+ A   F+   + D++ WN I+   +Q +     +     M + 
Sbjct: 35  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            + P+  +   VL AC    +   GK+IH    +      N FV ++LV MY    ++  
Sbjct: 95  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG-FGSNVFVQNSLVSMYAKFGQISY 153

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VFD + D+ +  W ++I+GY QN    EAL +F +M +   + P+   + SV+ A  
Sbjct: 154 ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ-CNVKPDWIALVSVMTAYT 212

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E     + IHG   KLGL  +  +  +L  MY++ G +E+++  F+ ME  + + WN 
Sbjct: 213 NVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 272

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI+GY   G   +A+ L REM      KN              + +SIT+ + +     +
Sbjct: 273 MISGYANNGYGEEAIKLFREMIT----KN-------------IRVDSITMRSAVLASAQV 315

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
            +L   + +  Y  ++    D  V + L+DMYAKCG +  AR VFD +  ++V+ W+V+I
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           M YG+HG GQE + L   M   G     V PN+ TFI L  AC +SG+V EG +LF+ M 
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAG-----VCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 430

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           D +GIEP   HY+CVVDLLGRAG +  AY  I  MP +      W +LL AC+IH+ V +
Sbjct: 431 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK-PGVSVWGALLSACKIHRKVRL 488

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GEIAA+ LF+L+P    HYV LSN+Y+SA LW +  +VR  M + G+ K+ G S IE   
Sbjct: 489 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 548

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +  F  GD SH +S+++   L+ L +R++  GYVP    VLH++N EE E  LC HSE+
Sbjct: 549 NLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSER 608

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+A+GI++T PGTT+R+ KNLR C +CH A K ISK+  REII+RD +RFHHFK+G CS
Sbjct: 609 LAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCS 668

Query: 878 CGDYW 882
           CGD+W
Sbjct: 669 CGDFW 673



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 222/424 (52%), Gaps = 13/424 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++   + N     I  Y++M  S + P+ F F  VLKA  G     +GKQIH    
Sbjct: 68  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           KYG+G S+V V N+LV+MY K G   +    VFD++ ++  VSW S+I+   + G    A
Sbjct: 128 KYGFG-SNVFVQNSLVSMYAKFGQISY-ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEA 185

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F+ M   NV+P    LVSV  A +N+   + L  G+ +HG   ++G E+   I+ +L
Sbjct: 186 LNVFKEMRQCNVKPDWIALVSVMTAYTNV---EDLGQGKSIHGLVTKLGLEFEPDIVISL 242

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
             MYAK G V+ A+  F   E  +L+ WN ++S  + N    EA+   R+M  + I+ D 
Sbjct: 243 TTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 302

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           +++ S + A + +  L+  + +  Y  +++   D++FV + L+DMY  C  +   R VFD
Sbjct: 303 ITMRSAVLASAQVGSLELARWLDGYISKSEYR-DDTFVNTGLIDMYAKCGSIYLARCVFD 361

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            ++DK + LW+ MI GYG + + +EA+ L+ +M++ AG+ PN  T   ++ AC  S    
Sbjct: 362 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ-AGVCPNDGTFIGLLTACKNSGLV- 419

Query: 404 DKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
            KEG     +    G + + Q+   ++D+  R G +  +      M ++  VS W  +++
Sbjct: 420 -KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLS 478

Query: 461 GYTI 464
              I
Sbjct: 479 ACKI 482



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 217/452 (48%), Gaps = 24/452 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           +K F  ++E D + WN++I    +    D  +  +  M  S V P+ FT + V  AC   
Sbjct: 54  HKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGT 113

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           S      +G+Q+HG + + G   N F+ N+L++MYAK G++  A+ +F    DR +VSW 
Sbjct: 114 SVEG---IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWT 170

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +I+S   QN   +EA+   ++M    +KPD +++ SV+ A +++E L  GK IH    + 
Sbjct: 171 SIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKL 230

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            +  +   V S L  MY     VE  R  F+ +    + LWNAMI+GY  N Y EEA+ L
Sbjct: 231 GLEFEPDIVIS-LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 289

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M     +  ++ TM S V A  +  +      + G+  K     D +V   L+DMY+
Sbjct: 290 FREM-ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 348

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G I +++ +FD +  +D V W+ MI GY + G   +A+ L  EM+             
Sbjct: 349 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG---------- 398

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                    PN  T + +L  C     + +G E+      + +       S +VD+  + 
Sbjct: 399 -------VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRA 451

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           G LN A      MP++  V  W  ++ A  +H
Sbjct: 452 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 10/269 (3%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +    ++    EA+  + EM + +++PD  A  +V+ A   ++DL  GK I
Sbjct: 164 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 223

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRF 158
           H  V K G       V  +L  MY K G  + +V +  F+R+ + + + WN+MI+     
Sbjct: 224 HGLVTKLGLEFEPDIVI-SLTTMYAKRG--LVEVARFFFNRMEKPNLILWNAMISGYANN 280

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--N 216
           G  + A++ FR M+  N+   S T+ S  LA + +     L L R + G  +   E+  +
Sbjct: 281 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG---SLELARWLDG-YISKSEYRDD 336

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           TF+   L+ MYAK G +  A+ +F    D+D+V W+ ++     +    EA+    +M  
Sbjct: 337 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 396

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            G+ P+  +   +L AC +  ++  G E+
Sbjct: 397 AGVCPNDGTFIGLLTACKNSGLVKEGWEL 425



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 23/257 (8%)

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL + R++    ++     G +  +   F ++   D + WN +I GYT            
Sbjct: 29  GLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT------------ 76

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
              +N+ +   R  +Y +D  + +  PN  T + VL  CG  S    GK+IH    +   
Sbjct: 77  --QKNIVDAPIR--MY-MDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGF 131

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
            ++V V ++LV MYAK G +++AR VFD +  R V++W  II  Y  +G+  E L + K 
Sbjct: 132 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 191

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M     R   VKP+ +  +++  A ++   + +G  + + +    G+E  PD    +  +
Sbjct: 192 M-----RQCNVKPDWIALVSVMTAYTNVEDLGQGKSI-HGLVTKLGLEFEPDIVISLTTM 245

Query: 656 LGRAGKVEDAYQLINMM 672
             + G VE A    N M
Sbjct: 246 YAKRGLVEVARFFFNRM 262


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/665 (38%), Positives = 376/665 (56%), Gaps = 26/665 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+M   +      G V+ A   F+   + D++ WN I+   +Q +     +     M + 
Sbjct: 20  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            + P+  +   VL AC    +   GK+IH    +      N FV ++LV MY    ++  
Sbjct: 80  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG-FGSNVFVQNSLVSMYAKFGQISY 138

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VFD + D+ +  W ++I+GY QN    EAL +F +M +   + P+   + SV+ A  
Sbjct: 139 ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ-CNVKPDWIALVSVMTAYT 197

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E     + IHG   KLGL  +  +  +L  MY++ G +E+++  F+ ME  + + WN 
Sbjct: 198 NVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 257

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI+GY   G   +A+ L REM      KN              + +SIT+ + +     +
Sbjct: 258 MISGYANNGYGEEAIKLFREMIT----KN-------------IRVDSITMRSAVLASAQV 300

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
            +L   + +  Y  ++    D  V + L+DMYAKCG +  AR VFD +  ++V+ W+V+I
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           M YG+HG GQE + L   M   G     V PN+ TFI L  AC +SG+V EG +LF+ M 
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAG-----VCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           D +GIEP   HY+CVVDLLGRAG +  AY  I  MP +      W +LL AC+IH+ V +
Sbjct: 416 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK-PGVSVWGALLSACKIHRKVRL 473

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GEIAA+ LF+L+P    HYV LSN+Y+SA LW +  +VR  M + G+ K+ G S IE   
Sbjct: 474 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 533

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +  F  GD SH +S+++   L+ L +R++  GYVP    VLH++N EE E  LC HSE+
Sbjct: 534 NLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSER 593

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+A+GI++T PGTT+R+ KNLR C +CH A K ISK+  REII+RD +RFHHFK+G CS
Sbjct: 594 LAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCS 653

Query: 878 CGDYW 882
           CGD+W
Sbjct: 654 CGDFW 658



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 222/424 (52%), Gaps = 13/424 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++   + N     I  Y++M  S + P+ F F  VLKA  G     +GKQIH    
Sbjct: 53  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           KYG+G S+V V N+LV+MY K G   +    VFD++ ++  VSW S+I+   + G    A
Sbjct: 113 KYGFG-SNVFVQNSLVSMYAKFGQISY-ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEA 170

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F+ M   NV+P    LVSV  A +N+   + L  G+ +HG   ++G E+   I+ +L
Sbjct: 171 LNVFKEMRQCNVKPDWIALVSVMTAYTNV---EDLGQGKSIHGLVTKLGLEFEPDIVISL 227

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
             MYAK G V+ A+  F   E  +L+ WN ++S  + N    EA+   R+M  + I+ D 
Sbjct: 228 TTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 287

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           +++ S + A + +  L+  + +  Y  +++   D++FV + L+DMY  C  +   R VFD
Sbjct: 288 ITMRSAVLASAQVGSLELARWLDGYISKSEYR-DDTFVNTGLIDMYAKCGSIYLARCVFD 346

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            ++DK + LW+ MI GYG + + +EA+ L+ +M++ AG+ PN  T   ++ AC  S    
Sbjct: 347 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ-AGVCPNDGTFIGLLTACKNSGLV- 404

Query: 404 DKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
            KEG     +    G + + Q+   ++D+  R G +  +      M ++  VS W  +++
Sbjct: 405 -KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLS 463

Query: 461 GYTI 464
              I
Sbjct: 464 ACKI 467



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 217/452 (48%), Gaps = 24/452 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           +K F  ++E D + WN++I    +    D  +  +  M  S V P+ FT + V  AC   
Sbjct: 39  HKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGT 98

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           S      +G+Q+HG + + G   N F+ N+L++MYAK G++  A+ +F    DR +VSW 
Sbjct: 99  SVEG---IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWT 155

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +I+S   QN   +EA+   ++M    +KPD +++ SV+ A +++E L  GK IH    + 
Sbjct: 156 SIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKL 215

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            +  +   V S L  MY     VE  R  F+ +    + LWNAMI+GY  N Y EEA+ L
Sbjct: 216 GLEFEPDIVIS-LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 274

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M     +  ++ TM S V A  +  +      + G+  K     D +V   L+DMY+
Sbjct: 275 FREM-ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 333

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G I +++ +FD +  +D V W+ MI GY + G   +A+ L  EM+             
Sbjct: 334 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG---------- 383

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                    PN  T + +L  C     + +G E+      + +       S +VD+  + 
Sbjct: 384 -------VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRA 436

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           G LN A      MP++  V  W  ++ A  +H
Sbjct: 437 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 10/269 (3%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +    ++    EA+  + EM + +++PD  A  +V+ A   ++DL  GK I
Sbjct: 149 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 208

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRF 158
           H  V K G       V  +L  MY K G  + +V +  F+R+ + + + WN+MI+     
Sbjct: 209 HGLVTKLGLEFEPDIVI-SLTTMYAKRG--LVEVARFFFNRMEKPNLILWNAMISGYANN 265

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--N 216
           G  + A++ FR M+  N+   S T+ S  LA + +     L L R + G  +   E+  +
Sbjct: 266 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG---SLELARWLDG-YISKSEYRDD 321

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           TF+   L+ MYAK G +  A+ +F    D+D+V W+ ++     +    EA+    +M  
Sbjct: 322 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 381

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            G+ P+  +   +L AC +  ++  G E+
Sbjct: 382 AGVCPNDGTFIGLLTACKNSGLVKEGWEL 410



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 23/257 (8%)

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL + R++    ++     G +  +   F ++   D + WN +I GYT            
Sbjct: 14  GLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT------------ 61

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
              +N+ +   R  +Y +D  + +  PN  T + VL  CG  S    GK+IH    +   
Sbjct: 62  --QKNIVDAPIR--MY-MDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGF 116

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
            ++V V ++LV MYAK G +++AR VFD +  R V++W  II  Y  +G+  E L + K 
Sbjct: 117 GSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKE 176

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M     R   VKP+ +  +++  A ++   + +G  + + +    G+E  PD    +  +
Sbjct: 177 M-----RQCNVKPDWIALVSVMTAYTNVEDLGQGKSI-HGLVTKLGLEFEPDIVISLTTM 230

Query: 656 LGRAGKVEDAYQLINMM 672
             + G VE A    N M
Sbjct: 231 YAKRGLVEVARFFFNRM 247


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/667 (38%), Positives = 382/667 (57%), Gaps = 25/667 (3%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + +++N ++         +  + LF   +  ++  WNT++  L  ND F +A+ F   M 
Sbjct: 45  DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  P+  +   VL AC+ L  L  G +IH   ++     D  FV ++LV +Y  C  +
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCD-VFVKTSLVCLYAKCGYL 163

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E   +VFD I DK +  W A+I+GY       EA+ +F ++ E+  L P++ T+  V+ A
Sbjct: 164 EDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEM-NLAPDSFTIVRVLSA 222

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C +       E IH   +++G+ R+ +V  +L+DMY++ G +E ++++FD M  +D VSW
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             MI GY + G   +A+ L  +MQ       R NV          KP+  T++ VL  C 
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQ-------RENV----------KPDCYTVVGVLSACA 325

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L AL  G+ +     RN    + V+G+AL+D+YAKCG ++ A  VF  M  ++ + WN 
Sbjct: 326 RLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNA 385

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II    M+G  +    L   +   G     +KP+  TFI L   C+H+G+V EG   F  
Sbjct: 386 IISGLAMNGYVKISFGLFGQVEKLG-----IKPDGNTFIGLLCGCTHAGLVDEGRRYFNS 440

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M   + + PS +HY C+VDLLGRAG +++A+QLI  MP E + A  W +LLGACRIH++ 
Sbjct: 441 MYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEAN-AIVWGALLGACRIHRDT 499

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           ++ E+A + L  LEP  + +YVLLSNIYS+   WD+A  VR  M E  ++K PGCSWIE 
Sbjct: 500 QLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEV 559

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
              +H+FL GD  H  SE+++  L+ L+++M+  GYVP T  VL ++ EEEKE  L  HS
Sbjct: 560 DGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHS 619

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLAIAFG+++  P   IRV KNLRVC DCH A K IS I  REI +RD  RFH F+ G+
Sbjct: 620 EKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGS 679

Query: 876 CSCGDYW 882
           CSC DYW
Sbjct: 680 CSCNDYW 686



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 226/449 (50%), Gaps = 10/449 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R    ++ F +AI  Y  M      P+NF FP VLKA A + DL LG +IH  VV
Sbjct: 80  WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+    V V  +LV +Y KCG  + D +KVFD I +K+ VSW ++I+     GK+  A
Sbjct: 140 KGGFD-CDVFVKTSLVCLYAKCGY-LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREA 197

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNAL 223
           ++ FR +L  N+ P SFT+V V  AC+ L     L  G  +H   + +G   N F+  +L
Sbjct: 198 IDMFRRLLEMNLAPDSFTIVRVLSACTQLG---DLNSGEWIHKCIMEMGMVRNVFVGTSL 254

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G ++ A+++F    ++D+VSW  ++   + N    EA+    QM    +KPD 
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++  VL AC+ L  L+ G+ +     RN+ L  N  +G+AL+D+Y  C  +     VF 
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLY-NPVLGTALIDLYAKCGSMSRAWEVFK 373

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + +K   +WNA+I+G   N Y + +  LF ++E++ G+ P+  T   ++  C  +    
Sbjct: 374 GMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKL-GIKPDGNTFIGLLCGCTHAGLVD 432

Query: 404 DKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
           +         +   L         ++D+  R G ++ +  +  +M +  + + W  ++  
Sbjct: 433 EGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 492

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNV 490
             I      A + L+++  +E   + N V
Sbjct: 493 CRIHRDTQLAELALKQLIELEPWNSGNYV 521



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 238/487 (48%), Gaps = 28/487 (5%)

Query: 117 NTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           N L+NM  +C  D  D      +F +I + +   WN+MI  L     +D A+E + +M  
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR 232
               P++FT   V  AC+ L     L+LG ++H   ++ G + + F+  +L+ +YAK G 
Sbjct: 106 EGFLPNNFTFPFVLKACARLL---DLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY 162

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           ++DA  +F    D+++VSW  I+S      KF EA+   R++    + PD  +I  VL A
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L  L++G+ IH   +    ++ N FVG++LVDMY  C  +E  R VFD + +K I  
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMG-MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           W AMI GY  N   +EA+ LF++M+    + P+  T+  V+ AC R  A    E + G  
Sbjct: 282 WGAMIQGYALNGLPKEAIDLFLQMQR-ENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            +     +  +  AL+D+Y++ G +  +  +F  M+ +D V WN +I+G  + G    + 
Sbjct: 341 DRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISF 400

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L  +++                  L  KP+  T + +L GC     + +G+       R
Sbjct: 401 GLFGQVEK-----------------LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 443

Query: 533 NM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVL 590
              L   +     +VD+  + G L+ A ++   MP+  N I W  ++ A  +H + Q   
Sbjct: 444 FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAE 503

Query: 591 ELLKNMV 597
             LK ++
Sbjct: 504 LALKQLI 510



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 135/265 (50%), Gaps = 14/265 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       +FREAI  +  +   ++ PD+F    VL A   + DL+ G+ IH  +
Sbjct: 180 SWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G  + +V V  +LV+MY KCG +M     VFD + EKD VSW +MI      G    
Sbjct: 240 MEMGM-VRNVFVGTSLVDMYAKCG-NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKE 297

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-- 221
           A++ F  M   NV+P  +T+V V  AC+ L     L LG  V G   R    N F+ N  
Sbjct: 298 AIDLFLQMQRENVKPDCYTVVGVLSACARLG---ALELGEWVSGLVDR----NEFLYNPV 350

Query: 222 ---ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
              AL+ +YAK G +  A  +FK  +++D V WN I+S L+ N     +     Q+   G
Sbjct: 351 LGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLG 410

Query: 279 IKPDGVSIASVLPACSHLEMLDTGK 303
           IKPDG +   +L  C+H  ++D G+
Sbjct: 411 IKPDGNTFIGLLCGCTHAGLVDEGR 435



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 23/260 (8%)

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           + GL  D Y+ N ++           ++ +F  ++  +   WNTMI G        DA+ 
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
               M++              E  L   PN+ T   VL  C  L  L  G +IH   ++ 
Sbjct: 99  FYGLMRS--------------EGFL---PNNFTFPFVLKACARLLDLQLGVKIHTLVVKG 141

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
               DV V ++LV +YAKCG L  A +VFD +P +NV++W  II  Y   G+ +E +++ 
Sbjct: 142 GFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMF 201

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           + ++        + P+  T + + +AC+  G ++ G +  +K   + G+  +      +V
Sbjct: 202 RRLLEM-----NLAPDSFTIVRVLSACTQLGDLNSG-EWIHKCIMEMGMVRNVFVGTSLV 255

Query: 654 DLLGRAGKVEDAYQLINMMP 673
           D+  + G +E A  + + MP
Sbjct: 256 DMYAKCGNMEKARSVFDGMP 275


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/610 (40%), Positives = 365/610 (59%), Gaps = 38/610 (6%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCR 333
           GI+PD  +   ++ ACS L   + G  IH     +  ++ + I NS     L+ MY  C 
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNS-----LITMYGKCD 59

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           + E  R+VFD + DK    W+A+I    Q++  +E   LF +M            ++++ 
Sbjct: 60  KYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM- 118

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            ACVRS    + + ++   ++ GL  D+ VQ+A   M++R GR+E+++ +FD +  +D V
Sbjct: 119 -ACVRSH--EEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLV 175

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +W T I  Y       +AL LL++M           ++          P++ITL+ V+  
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMM-------LQGIF----------PDAITLLGVIRA 218

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           C  L++      +H           ++ V +AL+D+Y KCG L +AR+VFD M  RN+IT
Sbjct: 219 CSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIIT 278

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W+ +I  YGMHG G+E L L   M A       VKP+ +TF+++ +ACSHSG+V+EG + 
Sbjct: 279 WSAMISGYGMHGWGREALNLFDQMKAS------VKPDHITFVSILSACSHSGLVAEGWEC 332

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M  D+G+ P P+HYAC+VD+LGRAGK+++A   I  MP     A  W +LLGACRIH
Sbjct: 333 FNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVR-PNAAVWGALLGACRIH 391

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            NV++ E+ A+ LF L+P  A  YV+L NIY+      +A  +R  MK  GV+K  G S 
Sbjct: 392 LNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSV 451

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IE  ++++ F+AGD SH Q++ ++  LE L +R+R+EGY PD + VLH+V+EE KE++L 
Sbjct: 452 IEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLY 511

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLAI FG+LN  PG+ IR+ KNLRVC DCH ATKFISK+  REI++RD  RFHHFK
Sbjct: 512 LHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFK 571

Query: 873 NGTCSCGDYW 882
           NG CSC DYW
Sbjct: 572 NGACSCRDYW 581



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 230/450 (51%), Gaps = 21/450 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R  IQPDNF FP ++KA + ++    G +IH  VVK+GY  S V ++N+L+ MYGKC 
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQ-SQVFISNSLITMYGKC- 58

Query: 128 SDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
            D +++ + VFD + +K+ VSW+++I    +  +       FR ML     PS   +++ 
Sbjct: 59  -DKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILN- 116

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           A+AC   S  +   + R V  N L   +++  + +A   M+A+ GRV+ A+ LF     +
Sbjct: 117 AMACVR-SHEEADDVYRVVVENGL---DFDQSVQSAAAGMFARCGRVEVARKLFDGIMSK 172

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           DLV+W T + +  + D  LEA+  L+QM L+GI PD +++  V+ ACS L        +H
Sbjct: 173 DLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVH 232

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
                         V +AL+D+Y  C  +   R+VFD + ++ I  W+AMI+GYG + + 
Sbjct: 233 GIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWG 292

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQN 425
            EAL LF +M+  A + P+  T  S++ AC  S    +  E  +  A   G+        
Sbjct: 293 REALNLFDQMK--ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYA 350

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            ++D+  R G+++ +    + M VR +   W  ++    I      A M+ R + +++  
Sbjct: 351 CMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPH 410

Query: 485 KNRN-----NVYDLDETVLRPKPNSI-TLM 508
                    N+Y L  T  R + +SI TLM
Sbjct: 411 NAGRYVILYNIYTL--TGKRKEADSIRTLM 438



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W  ++ +  +++   EA+    +M    I PD      V++A + +    L   +H  +
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGII 235

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
               +    + V   L+++Y KCGS  +   KVFD + E++ ++W++MI+     G    
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTY-ARKVFDGMQERNIITWSAMISGYGMHGWGRE 294

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL  F  M  ++V+P   T VS+  ACS+
Sbjct: 295 ALNLFDQM-KASVKPDHITFVSILSACSH 322


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/783 (36%), Positives = 430/783 (54%), Gaps = 39/783 (4%)

Query: 113 VTVANTLVNMYGKCGSD-MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           V+  NT++   G C S  M +   +F+R+ E++ VSW  MI+      +   A + FR M
Sbjct: 157 VSSWNTMLT--GYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTM 214

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK- 229
           L   + P    LVSV  A  +L +   L     +H    + G E +  +  A++  Y K 
Sbjct: 215 LCEGMTPEQPNLVSVLSAVRHLGKPGILE---SIHVLVHKTGFERDVVVGTAILNGYTKD 271

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
           +  +D A   F+    R+  +W+TI+++LSQ  +  +A    ++  L+ +     S  S+
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSM 327

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L   +    +D  K      L + I   N    +A++  Y     V+    +F+ +  + 
Sbjct: 328 LTGLARYGRIDDAK-----ILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRN 382

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
              W  MI GY +N   E+AL+    +    G+ P+ ++++S   AC   EA    + +H
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQALHR-KGMLPSLSSLTSSFFACSNIEALETGKQVH 441

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             A+K G   + YV NAL+ +Y +   I   + IFD M V+DTVS+N+ ++         
Sbjct: 442 SLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFD 501

Query: 470 DALMLLREMQNME------------EEKNRNNVYDLDETVL--RPKPNSITLMTVLPGCG 515
           +A  +   M + +            +    N   ++  ++L  R  PN   L  +L   G
Sbjct: 502 EARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSG 561

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L A   G++IH  AI+  + + +VV +ALV MY KC   + + +VFD M  R++ TWN 
Sbjct: 562 NLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNT 620

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II  Y  HG G+E + + + MV+ G     V PNEVTF+ L  ACSHSG+V EG   F  
Sbjct: 621 IITGYAQHGLGREAIRMYQLMVSAG-----VLPNEVTFVGLLHACSHSGLVDEGHQFFKS 675

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M  DYG+ P  +HYAC+VDLLGRAG V+ A   I  MP E D    WS+LLGAC+IH+NV
Sbjct: 676 MSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSV-IWSALLGACKIHKNV 734

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           EIG  AA+ LF +EP  A +YV+LSNIYSS  +WD+   VRK MKE GV K+PGCSW++ 
Sbjct: 735 EIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQI 794

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
            +++H F+ GD  H+Q + ++  L  L   ++  GYVPDT  VLH+++EE+KE+ L  HS
Sbjct: 795 KNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHS 854

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLA+A+G+L TP G  I++ KNLR+C DCH   KF+S +  REI +RD  RFHHF+NG+
Sbjct: 855 EKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGS 914

Query: 876 CSC 878
           CSC
Sbjct: 915 CSC 917



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/580 (21%), Positives = 247/580 (42%), Gaps = 86/580 (14%)

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           G+ G  + +  +VFD +  +D ++WNSMI   C  G  D        +   N+   +  L
Sbjct: 44  GRLGR-LHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILL 102

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
                  S  +R   +R  R+V      +G  NT   NA++  Y + G +  A+ LF + 
Sbjct: 103 -------SGYARAGRVRDARRVFDG---MGVRNTVAWNAMVTCYVQNGDITLARKLFDAM 152

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEA----------------VMF---------------LR 272
             RD+ SWNT+++    +    EA                VM                 R
Sbjct: 153 PSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFR 212

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC-N 331
            M   G+ P+  ++ SVL A  HL      + IH    +     D   VG+A+++ Y  +
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERD-VVVGTAILNGYTKD 271

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK--MEEVAGLWPNATTM 389
              ++   + F+ ++ +    W+ +I    Q    ++A  ++ +  ++ V    P+ T+M
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV----PSRTSM 327

Query: 390 SSVVPACVR-SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            + +    R  +A    + IH   +           NA++  Y +   ++ ++ +F+ M 
Sbjct: 328 LTGLARYGRIDDAKILFDQIHEPNV--------VSWNAMITGYMQNEMVDEAEDLFNRMP 379

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            R+T+SW  MI GY   G+   AL+ L+ +       +R  +           P+  +L 
Sbjct: 380 FRNTISWAGMIAGYARNGRSEQALVSLQAL-------HRKGM----------LPSLSSLT 422

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +    C  + AL  GK++H+ A++     +  V +AL+ +Y K   +   R++FD M V+
Sbjct: 423 SSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK 482

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + +++N  + A   +    E  ++  NM +         P+ V++  + +AC+ +   +E
Sbjct: 483 DTVSYNSFMSALVQNNLFDEARDVFNNMPS---------PDVVSWTTIISACAQADQGNE 533

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            +++F  M  +  + P+P     ++ L G  G  +   Q+
Sbjct: 534 AVEIFRSMLHEREL-PNPPILTILLGLSGNLGAPQLGQQI 572



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 38/294 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   AR+ +  +A++S   + R  + P   +  +   A + I+ L  GKQ+H+  
Sbjct: 385 SWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLA 444

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD- 162
           VK G   +S  V N L+ +YGK  S +  V ++FDR+T KD VS+NS ++ L +   +D 
Sbjct: 445 VKAGCQFNSY-VCNALITLYGKYRS-IGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDE 502

Query: 163 ------------------------------LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
                                          A+E FR ML+    P+   L  +     N
Sbjct: 503 ARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGN 562

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L      +LG+Q+H  ++++G +    + NAL++MY K    D  K +F S E+RD+ +W
Sbjct: 563 LG---APQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-VFDSMEERDIFTW 618

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           NTI++  +Q+    EA+   + M   G+ P+ V+   +L ACSH  ++D G + 
Sbjct: 619 NTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQF 672



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 253/598 (42%), Gaps = 117/598 (19%)

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
            +LGR+ +A+ +F S   RD+++WN+++ +   N                G+   G S+A
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNN----------------GMPDAGRSLA 87

Query: 288 SVLPACSHLEMLDTGKEI---HAYALR--------NDILIDNSFVGSALVDMYCNCREVE 336
             +   +    L TG  +   +A A R        + + + N+   +A+V  Y    ++ 
Sbjct: 88  DAISGGN----LRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDIT 143

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE------------------ 378
             R++FD +  + ++ WN M+TGY  ++  EEA  LF +M E                  
Sbjct: 144 LARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQ 203

Query: 379 ------------VAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQN 425
                         G+ P    + SV+ A VR    P   E IH    K G  RD  V  
Sbjct: 204 HGRAWDMFRTMLCEGMTPEQPNLVSVLSA-VRHLGKPGILESIHVLVHKTGFERDVVVGT 262

Query: 426 ALMDMYSR-MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           A+++ Y++ +  ++ +   F+ M  R+  +W+T+I   +  G+  DA             
Sbjct: 263 AILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFA----------- 311

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGS 543
                VY  D   L+  P+  +++T L   G +  A     +IH          +VV  +
Sbjct: 312 -----VYQRDP--LKSVPSRTSMLTGLARYGRIDDAKILFDQIH--------EPNVVSWN 356

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           A++  Y +   ++ A  +F+ MP RN I+W  +I  Y  +G  ++ L  L+ +  +G   
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKG--- 413

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGK 661
             + P+  +  + F ACS+   +  G  + + +    G +   + Y C  ++ L G+   
Sbjct: 414 --MLPSLSSLTSSFFACSNIEALETGKQV-HSLAVKAGCQ--FNSYVCNALITLYGKYRS 468

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLL 719
           +    Q+ + M        +++S + A  + QN    E  A+++F  +  PDV S   ++
Sbjct: 469 IGSVRQIFDRM--TVKDTVSYNSFMSA--LVQNNLFDE--ARDVFNNMPSPDVVSWTTII 522

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD-GSHQQSEQLH 776
           S    + Q  ++A+++ + M        P    I  G      L+G+ G+ Q  +Q+H
Sbjct: 523 SACAQADQ-GNEAVEIFRSMLHERELPNPPILTILLG------LSGNLGAPQLGQQIH 573



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 39/200 (19%)

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY---GMHGEGQEVLELLKNMVAE 599
           SA +    + G L+ AR VFD MP R++I WN +I AY   GM   G+         +A+
Sbjct: 37  SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRS--------LAD 88

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
              GG ++   +    L +  + +G V +   +F    D  G+  +   +  +V    + 
Sbjct: 89  AISGGNLRTGTI----LLSGYARAGRVRDARRVF----DGMGVRNTV-AWNAMVTCYVQN 139

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLFLLEPD------- 711
           G +  A +L + MP       +W+++L G C      E     A+NLF   P+       
Sbjct: 140 GDITLARKLFDAMPSR--DVSSWNTMLTGYCHSQLMEE-----ARNLFERMPERNGVSWT 192

Query: 712 -VASHYVLLSNIYSSAQLWD 730
            + S YVL   I    + WD
Sbjct: 193 VMISGYVL---IEQHGRAWD 209


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/754 (35%), Positives = 420/754 (55%), Gaps = 28/754 (3%)

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M +   +F+ + + D   WN MI      G +  A++ +  M +  V   +FT   V  A
Sbjct: 76  MKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKA 135

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C  L     L  G +VHG  ++ G + + +I N+L+ MYAK+G ++ A+ +F+    RDL
Sbjct: 136 CGGLY---DLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDL 192

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           VSWN+++S          ++   R+M   GIK D  S+  +L ACS    L  GKEIH  
Sbjct: 193 VSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQ 252

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            +R+ + +D   V ++LVDMY  C  ++   R+FD I+DK I  WNAMI GY  N    E
Sbjct: 253 MMRSRLELD-VMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFE 311

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           +     KM+E   L P+  TM +++P C + EA    + +HG AI+ G      ++ AL+
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY   G+++ ++ +F  M  R+ +SWN MI  YT  G++  A+ L +++ N        
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCN-------- 423

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                 +T+   KP++ T+ ++LP    L++L + ++IH Y  +  L ++  V +++V M
Sbjct: 424 ------KTL---KPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFM 474

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y KCG L  AR +FD M  ++VI+WN +IMAY +HG G+  +EL   M  +G      +P
Sbjct: 475 YGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKG-----FEP 529

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N  TF++L  +CS +G+V+EG + F  MK DY I P  +HY C++DL+GR G ++ A   
Sbjct: 530 NGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNF 589

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP     A  W SLL A R   +VE+ EIAA+++  LE D    YVLLSN+Y+ A  
Sbjct: 590 IEEMPLA-PTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGR 648

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W+    ++  MK+ G+ K  GCS ++   +  +F+  D S  +   ++  L+ +S+++ +
Sbjct: 649 WEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
           + YV   +    +  E+++      HS +LAI FG+++T  G  + V KN+R+C  CH+ 
Sbjct: 709 DVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRF 768

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K IS+   REII+RD + FHHF  G CSCGDYW
Sbjct: 769 AKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 293/584 (50%), Gaps = 45/584 (7%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R    +  F +A+  Y  M    ++ DNF +P V+KA  G+ DL+ G+++H  V+
Sbjct: 94  WNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVI 153

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G  L  + + N+L+ MY K G  +     VF  +  +D VSWNSMI+     G    +
Sbjct: 154 KSGLDL-DIYIGNSLIIMYAKIGC-IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRS 211

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  FR M  S ++   F+++ +  AC   S    LR G+++H   +R   E +  +  +L
Sbjct: 212 LSCFREMQASGIKLDRFSVIGILGAC---SLEGFLRNGKEIHCQMMRSRLELDVMVQTSL 268

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPD 282
           + MYAK GR+D A+ LF    D+ +V+WN ++   S N +  E+  ++R+M   G + PD
Sbjct: 269 VDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPD 328

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +++ ++LP C+ LE +  GK +H +A+RN  L  +  + +ALVDMY  C +++    +F
Sbjct: 329 WITMINLLPPCAQLEAILLGKSVHGFAIRNGFL-PHLVLETALVDMYGECGKLKPAECLF 387

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             ++++ +  WNAMI  Y +N  + +A+ LF  +     L P+ATT++S++PA     + 
Sbjct: 388 GQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKT-LKPDATTIASILPAYAELASL 446

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + E IHG+  KL L  + +V N+++ MY + G +  ++ IFD M  +D +SWNT+I  Y
Sbjct: 447 REAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAY 506

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            I G    ++ L  EM+    E                 PN  T +++L  C     + +
Sbjct: 507 AIHGFGRISIELFSEMREKGFE-----------------PNGSTFVSLLLSCSVAGLVNE 549

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G E      R+  +   +     ++D+  + G L+ A+   + MP+      W  ++ A 
Sbjct: 550 GWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS 609

Query: 581 GMHGE-------GQEVLE----------LLKNMVAEGSRGGEVK 607
              G+        + +L           LL NM AE  R  +V+
Sbjct: 610 RNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVE 653



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 239/482 (49%), Gaps = 32/482 (6%)

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E N+  +   ++ Y + G + +A  LF++    D   WN ++     N  F +AV F  +
Sbjct: 57  ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G++ D  +   V+ AC  L  L  G+ +H   +++ + +D  ++G++L+ MY    
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLD-IYIGNSLIIMYAKIG 175

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E    VF  +  + +  WN+MI+GY        +L  F +M + +G+  +  ++  ++
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREM-QASGIKLDRFSVIGIL 234

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC       + + IH   ++  L  D  VQ +L+DMY++ GR++ ++ +FD +  +  V
Sbjct: 235 GACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV 294

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           +WN MI GY++  Q  ++   +R+MQ                   +  P+ IT++ +LP 
Sbjct: 295 AWNAMIGGYSLNAQSFESFAYVRKMQEGG----------------KLHPDWITMINLLPP 338

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  L A+  GK +H +AIRN     +V+ +ALVDMY +CG L  A  +F  M  RN+I+W
Sbjct: 339 CAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISW 398

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL- 632
           N +I +Y  +GE ++ + L +++  +      +KP+  T  ++  A +    + E   + 
Sbjct: 399 NAMIASYTKNGENRKAMTLFQDLCNK-----TLKPDATTIASILPAYAELASLREAEQIH 453

Query: 633 --FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
               K+K D     S      +V + G+ G +  A ++ + M   F    +W++++ A  
Sbjct: 454 GYVTKLKLDSNTFVSNS----IVFMYGKCGNLLRAREIFDRMT--FKDVISWNTVIMAYA 507

Query: 691 IH 692
           IH
Sbjct: 508 IH 509



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + S  ++ + R+A+  + ++    ++PD     ++L A A +  L   +QIH +V
Sbjct: 397 SWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYV 456

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K     S+  V+N++V MYGKCG ++    ++FDR+T KD +SWN++I      G   +
Sbjct: 457 TKLKLD-SNTFVSNSIVFMYGKCG-NLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRI 514

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           ++E F  M     EP+  T VS+ L+CS
Sbjct: 515 SIELFSEMREKGFEPNGSTFVSLLLSCS 542


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 380/658 (57%), Gaps = 49/658 (7%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           ++W  I+   + +     ++     +   GI PD     S+L A +  +  +  + +HA 
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 309 ALRNDILIDNSFVGSALVDMYCNCR----------------------EVECGRRVFDFIS 346
            +R     D  +  +AL++MY                          +++  R++FD + 
Sbjct: 102 VIRLGFHFD-LYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + +  WN +I G  QN   EEAL +  +M +   L P++ T+SS++P           +
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGK-ENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IHG+AI+ G  +D ++ ++L+DMY++  ++E+S   F  +  RD +SWN++I G    G
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           +    L   R M              L E V   KP  ++  +V+P C  L+AL  GK++
Sbjct: 280 RFDQGLGFFRRM--------------LKEKV---KPMQVSFSSVIPACAHLTALNLGKQL 322

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHG 584
           HAY IR     +  + S+L+DMYAKCG +  AR +F+ + +  R++++W  IIM   MHG
Sbjct: 323 HAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHG 382

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
              + + L + M+ +G     VKP  V F+A+  ACSH+G+V EG   F  M+ D+G+ P
Sbjct: 383 HALDAVSLFEEMLVDG-----VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAP 437

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HYA V DLLGRAG++E+AY  I+ M  E      WS+LL ACR H+N+E+ E     
Sbjct: 438 GLEHYAAVADLLGRAGRLEEAYDFISNMGEE-PTGSVWSTLLAACRAHKNIELAEKVVNK 496

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           + L++P     +V++SNIYS+AQ W  A  +R +M++ G++K P CSWIE G+++H FLA
Sbjct: 497 ILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLA 556

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
           GD SH   ++++  L  L E+M KEGYV DT+ VLH+V+EE K  LL  HSE+LAIAFGI
Sbjct: 557 GDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGI 616

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++T  GTTIRV KN+RVC DCH A KF++KI  REII+RD  RFHHFKNG+CSCGDYW
Sbjct: 617 ISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 268/561 (47%), Gaps = 63/561 (11%)

Query: 9   TLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM 68
           T++P+  +  L       T AT   L         +WI  ++  A     R ++ S+  +
Sbjct: 17  TVVPTCHVKQLHAQIVKTTKATPHSL---------AWICIIKCYASHGLLRHSLASFNLL 67

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
               I PD   FP++L+A    +  +L + +HA V++ G+     T AN L+NMY K   
Sbjct: 68  RSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYT-ANALMNMYSKFHP 126

Query: 129 DMW---------------------DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
            +                       V K+FDR+  +D VSWN++IA   + G ++ AL  
Sbjct: 127 HLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNM 186

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
            + M   N+ P SFTL S+       +    +  G+++HG ++R G + + FI ++L+ M
Sbjct: 187 VKEMGKENLRPDSFTLSSI---LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDM 243

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK  +V+ +   F    +RD +SWN+I++   QN +F + + F R+M    +KP  VS 
Sbjct: 244 YAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSF 303

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           +SV+PAC+HL  L+ GK++HAY +R     DN F+ S+L+DMY  C  ++  R +F+ I 
Sbjct: 304 SSVIPACAHLTALNLGKQLHAYIIRLG-FDDNKFIASSLLDMYAKCGNIKMARYIFNKIE 362

Query: 347 --DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
             D+ +  W A+I G   + +  +A+ LF +M  V G+ P      +V+ AC  +    D
Sbjct: 363 MCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM-LVDGVKPCYVAFMAVLTACSHA-GLVD 420

Query: 405 KEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           +   + ++++   G    +++  A+ D+  R GR+E +     +M    T S W+T++  
Sbjct: 421 EGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA 480

Query: 462 YTICGQHGDALM--------LLREMQNMEEEKNRNNVYDL-----DETVLRPKPNSITLM 508
              C  H +  +        LL +  NM      +N+Y       D   LR +     L 
Sbjct: 481 ---CRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLK 537

Query: 509 TVLPGCGALSALAKGKEIHAY 529
              P C   S +  G ++H +
Sbjct: 538 KT-PAC---SWIEVGNKVHTF 554


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/569 (42%), Positives = 358/569 (62%), Gaps = 26/569 (4%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           + F+ + L++M+     V+  R+VFD    + I +WNA+           + L L+ +M 
Sbjct: 103 DPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMN 162

Query: 378 EVAGLWPNATTMSSVVPACVRSE---AFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            + G+  +  T + ++ ACV SE   +F  K + IH H ++ G G   +V   LMDMY+R
Sbjct: 163 -MMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYAR 221

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G +  +  +FD+M V++ VSW+ MI  Y   G+  +AL L REM          N +D 
Sbjct: 222 FGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMML--------NTHD- 272

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                   PNS+T+++VL  C A +AL +GK IHAY +R  L + + V SAL+ MYA+CG
Sbjct: 273 ------SVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 326

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            L   + +FD M  ++V+ WN +I +YG+HG G++ +++ + M+  G       P+ ++F
Sbjct: 327 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG-----FSPSHISF 381

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           I++  ACSH+G+V EG  LF  M  ++GI+PS +HYAC+VDLLGRA ++++A ++I  + 
Sbjct: 382 ISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLR 441

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            E      W SLLGACRIH +VE+ E A++ LF LEP  A +YVLL++IY+ A++WD+  
Sbjct: 442 IE-PGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVK 500

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            V+K +    ++K PG SWIE   +I+ F + D  + Q EQLH  L NLS  M++ GY P
Sbjct: 501 RVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTP 560

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
            T  VL+++++EEKE ++ GHSEKLA+AFG++NT  G TIR+ KNLR+C DCH  TKFIS
Sbjct: 561 QTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFIS 620

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K   REI++RD+ RFHHFK+G CSCGDYW
Sbjct: 621 KFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 185/363 (50%), Gaps = 11/363 (3%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           LS    +H  +V  G+      +A  L+NM+ +  + + +  KVFD+  ++    WN++ 
Sbjct: 85  LSDALDVHQLLVDGGFDQDPF-LATKLINMFSELDT-VDNARKVFDKTRKRTIYVWNALF 142

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC-SNLSRRDGLRLGRQVHGNSLR 211
             L   G+ +  LE +  M    V    FT   +  AC ++      L+ G+++H + LR
Sbjct: 143 RALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 202

Query: 212 VGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   +  +M  LM MYA+ G V  A  +F     +++VSW+ +++  ++N K  EA+  
Sbjct: 203 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALEL 262

Query: 271 LRQMALRGIK--PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVD 327
            R+M L      P+ V++ SVL AC+    L+ GK IHAY LR    +D+   V SAL+ 
Sbjct: 263 FREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRG--LDSILPVISALIT 320

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C ++E G+ +FD +  K + LWN++I+ YG + Y  +A+ +F +M +  G  P+  
Sbjct: 321 MYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMID-HGFSPSHI 379

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           +  SV+ AC  +    + + +    +K  G+         ++D+  R  R++ +  I +D
Sbjct: 380 SFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIED 439

Query: 447 MEV 449
           + +
Sbjct: 440 LRI 442



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 202/443 (45%), Gaps = 33/443 (7%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N +I +LC+ G         +  LY     S+ T  +  L   + +RR+ L     VH  
Sbjct: 42  NHLIQSLCKQGN-------LKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQL 94

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            +  G + + F+   L+ M+++L  VD+A+ +F     R +  WN +  +L+   +  + 
Sbjct: 95  LVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDV 154

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLE----MLDTGKEIHAYALRNDILIDNSFVGS 323
           +    +M + G+  D  +   +L AC   E     L  GKEIHA+ LR+     +  V +
Sbjct: 155 LELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGA-HVHVMT 213

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVAGL 382
            L+DMY     V     VFD +  K +  W+AMI  Y +N    EAL LF +M       
Sbjct: 214 TLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDS 273

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN+ TM SV+ AC    A    + IH + ++ GL     V +AL+ MY+R G++E  + 
Sbjct: 274 VPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQL 333

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           IFD M  +D V WN++I+ Y + G    A+ +  EM              +D       P
Sbjct: 334 IFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEM--------------IDHGF---SP 376

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRV 561
           + I+ ++VL  C     + +GK++    ++   +   V   + +VD+  +   L+ A ++
Sbjct: 377 SHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI 436

Query: 562 F-DLMPVRNVITWNVIIMAYGMH 583
             DL        W  ++ A  +H
Sbjct: 437 IEDLRIEPGPKVWGSLLGACRIH 459



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 148/276 (53%), Gaps = 12/276 (4%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG----IQD 92
           ++ R    W    R+ A + +  + +  Y  M    +  D F +  +LKA       +  
Sbjct: 130 TRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSF 189

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  GK+IHAH++++GYG + V V  TL++MY + G   +    VFD +  K+ VSW++MI
Sbjct: 190 LQKGKEIHAHILRHGYG-AHVHVMTTLMDMYARFGCVSY-ASAVFDEMPVKNVVSWSAMI 247

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           A   + GK   ALE FR M+ +  +  P+S T+VSV  AC+  +    L  G+ +H   L
Sbjct: 248 ACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFA---ALEQGKLIHAYIL 304

Query: 211 RVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           R G  +   +++AL+ MYA+ G+++  + +F     +D+V WN+++SS   +    +A+ 
Sbjct: 305 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 364

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
              +M   G  P  +S  SVL ACSH  +++ GK++
Sbjct: 365 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 400


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/685 (37%), Positives = 388/685 (56%), Gaps = 59/685 (8%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +S    +   S+ + F   +     M  +GI PD   + +V+  C+ L  L TGK++H +
Sbjct: 40  ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD------------------------- 343
           AL + + +D S V S+L+ MY     ++  R VFD                         
Sbjct: 100 ALVSGLGLD-SVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKE 158

Query: 344 ----FISDKKIAL------WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
               F   + + +      WN MI+G+ ++    +A+++F  M  + GL P+ T++SSV+
Sbjct: 159 TKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMH-LEGLKPDGTSVSSVL 217

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           PA    +       IH + IK GLG D++V +AL+DMY +         +F++M+  D  
Sbjct: 218 PAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVG 277

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEE---------KNRNNVYDLDETVL------ 498
           + N ++TG +  G   +AL + ++ + M+               N  D++   L      
Sbjct: 278 ACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQI 337

Query: 499 -RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KPNS+T+  +LP CG ++AL  GK  H +++RN +  DV VGSAL+DMYAKCG +  
Sbjct: 338 EGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLA 397

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           +R  FD+MP RN+++WN ++  Y MHG+  E + + + M     R G+ KP+ V+F  + 
Sbjct: 398 SRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELM----QRCGQ-KPDHVSFTCVL 452

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +AC+  G+  EG   F  M  ++G+E   +HY+C+V LLGR+G++E+AY +I  MP E D
Sbjct: 453 SACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPD 512

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W +LL +CR+H  V++GEIAA+ +F LEP    +Y+LLSNIY+S  +W +   VR 
Sbjct: 513 SC-VWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRD 571

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            M+  G++K PG SWIE  +++H  LAGD SH Q  Q+   L  L+  M+K GYVP T  
Sbjct: 572 MMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDF 631

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VL +V E++KE +LCGHSEKLA+  G+LNT PG  ++V KNLR+C DCH   KFIS  E 
Sbjct: 632 VLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEK 691

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI +RD  RFH FK G CSCGDYW
Sbjct: 692 REIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 237/528 (44%), Gaps = 95/528 (17%)

Query: 5   AQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS 64
           + CL       LS  Q H     T  SLP             E+++  ++ N F   I  
Sbjct: 17  SHCLCSATKASLS--QAHAHILKTGISLP-------------ETIQIFSKLNHFGHVIRV 61

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           +  M    I PD+   P V+K  A +  L  GKQ+H   +  G GL SV V ++L++MY 
Sbjct: 62  FSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSV-VLSSLLHMYV 120

Query: 125 KCGSDMWDVYKVFDRI-----------------------------------TEKDQVSWN 149
           +    + D   VFD++                                    E + VSWN
Sbjct: 121 QF-DHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWN 179

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
            MI+   R G +  A+  F+ M    ++P   ++ SV  A  +L   D   +G Q+H   
Sbjct: 180 GMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDL---DMPLMGIQIHCYV 236

Query: 210 LRVGEW-NTFIMNALMAMYAKL-------------------------------GRVDDAK 237
           ++ G   + F+++AL+ MY K                                G VD+A 
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296

Query: 238 TLFKSFEDRDL--VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
            +FK F+  DL  VSW ++++S SQN K +EA+   R+M + G+KP+ V+I  +LPAC +
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGN 356

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           +  L  GK  H ++LRN I  ++ +VGSAL+DMY  C  +   R  FD + ++ +  WN+
Sbjct: 357 IAALLHGKAAHCFSLRNGIF-NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNS 415

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           ++ GY  +    EA+ +F  M+   G  P+  + + V+ AC +     ++   +  ++  
Sbjct: 416 LMAGYAMHGKTFEAINIFELMQR-CGQKPDHVSFTCVLSACTQG-GLTEEGWFYFDSMSR 473

Query: 416 GLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
             G +  +++   ++ +  R GR+E +  +   M    D+  W  +++
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLS 521


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/732 (34%), Positives = 393/732 (53%), Gaps = 89/732 (12%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N+L+++YAK GR+ DA  +F    DRD VSW  ++  L+++ +F +AV     M 
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  P   ++ +VL +C+ +E    G+++H + ++   L     V ++++ MY  C + 
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG-LSSCVPVANSVLYMYGKCGDA 398

Query: 336 ECGRRVFDFIS-------------------------------DKKIALWNAMITGYGQNE 364
           E  R VF+ +                                ++ I  WN +I GY QN 
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            D  AL  F +M   + + P+A T++SV+ AC         + +H + ++ G+     + 
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518

Query: 425 NALMDMYSRMGRIEI---------------------------------SKTIFDDMEVRD 451
           NAL+  Y++ G +E                                  ++ IFD M  RD
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W  MI GY   GQ+ +A+ L R M                  ++ P+PNS TL  VL
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSM-----------------ILIGPEPNSHTLAAVL 621

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-V 570
             C +L+ L  GK+IH  AIR++    V V +A++ +YA+ G +  ARRVFD +  R   
Sbjct: 622 SACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKET 681

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ITW  +I+A   HG G++ + L + MV  G     VKP+ +T++ + +AC+H+G V +G 
Sbjct: 682 ITWTSMIVAMAQHGLGEQAVVLFEEMVRVG-----VKPDHITYVGVLSACAHAGFVDKGK 736

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             + +M++++GI P   HYAC+VDL  RAG + +A++ I  MP   D    W SLL ACR
Sbjct: 737 RYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTV-VWGSLLAACR 795

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           + +N ++ E+AA  L  ++P  +  Y  L+N+YS+   W+ A  + K  K+ GV+KE G 
Sbjct: 796 VRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGF 855

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SW     ++H F A D  H Q + ++     + E ++K G+VPD + VLH+V++E KE L
Sbjct: 856 SWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEEL 915

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG+++TP  TT+R+ KNLRVCNDCH A KFISK   REII+RD  RFHH
Sbjct: 916 LSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHH 975

Query: 871 FKNGTCSCGDYW 882
           F++G CSC DYW
Sbjct: 976 FRDGYCSCKDYW 987



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 236/488 (48%), Gaps = 78/488 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    RS +F +A+ ++++M      P  F    VL + A ++   +G+++H  V
Sbjct: 314 SWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFV 373

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS----------------DMWDV-------------- 133
           VK G   S V VAN+++ MYGKCG                   W+V              
Sbjct: 374 VKLGLS-SCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELA 432

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSN 192
             +F+ + E+  VSWN++IA   + G   +AL+ F RM+  S++EP +FT+ SV  AC+N
Sbjct: 433 VSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACAN 492

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD----------------- 234
           L     L++G+Q+H   LR G   ++ IMNAL++ YAK G V+                 
Sbjct: 493 LRM---LKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVI 549

Query: 235 ----------------DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                            A+ +F    +RD+++W  ++    QN +  EA+   R M L G
Sbjct: 550 SFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIG 609

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVEC 337
            +P+  ++A+VL AC+ L  LD GK+IH  A+R+  L + S  V +A++ +Y     V  
Sbjct: 610 PEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS--LQEQSVSVSNAIITVYARSGSVPL 667

Query: 338 GRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            RRVFD I  +K  + W +MI    Q+   E+A++LF +M  V G+ P+  T   V+ AC
Sbjct: 668 ARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRV-GVKPDHITYVGVLSAC 726

Query: 397 VRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
             +  F DK   +   ++   G+         ++D+++R G +  +      M V  DTV
Sbjct: 727 AHA-GFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTV 785

Query: 454 SWNTMITG 461
            W +++  
Sbjct: 786 VWGSLLAA 793



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 266/591 (45%), Gaps = 128/591 (21%)

Query: 94  SLGKQIHAHVVKYGYGLS------------SVTVA------------------------N 117
           S G+ IHAH VK G  +S            SV V+                        N
Sbjct: 226 SAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWN 285

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK-WDLALEAFRMMLYSNV 176
           +L+++Y K G  + D + VF  + ++D VSW  MI  L R G+ WD A++ F  M+    
Sbjct: 286 SLLSLYAKSGR-LPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWD-AVKTFLDMVSEGF 343

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDD 235
            PS FTL +V  +C+ +   +   +GR+VH   +++G  +   + N+++ MY K G  + 
Sbjct: 344 APSQFTLTNVLSSCAAM---EACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAET 400

Query: 236 AKTLFKSFE-------------------------------DRDLVSWNTIVSSLSQNDKF 264
           A+ +F+  +                               +R +VSWNTI++  +QN   
Sbjct: 401 ARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLD 460

Query: 265 LEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--------- 314
             A+ F  R ++   ++PD  ++ SVL AC++L ML  GK++H+Y LR  +         
Sbjct: 461 GMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNA 520

Query: 315 ----------------LIDNSFVG-------SALVDMYCNCREVECGRRVFDFISDKKIA 351
                           ++D + V        +AL++ Y    + +  R +FD ++++ + 
Sbjct: 521 LISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVI 580

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W AMI GY QN  ++EA+ LF  M  + G  PN+ T+++V+ AC         + IH  
Sbjct: 581 AWTAMIVGYHQNGQNDEAMELFRSMILI-GPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           AI+    +   V NA++ +Y+R G + +++ +FD +  R +T++W +MI      G    
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-AY 529
           A++L  EM  +                   KP+ IT + VL  C     + KGK  +   
Sbjct: 700 AVVLFEEMVRVGV-----------------KPDHITYVGVLSACAHAGFVDKGKRYYEQM 742

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
              + +   +   + +VD++A+ G L  A      MPV  + + W  ++ A
Sbjct: 743 QNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 35/262 (13%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           R+ +  N+L+ +Y++ GR+  +  +F +M  RD VSW  MI G    G+  DA+    +M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                         + E      P+  TL  VL  C A+ A   G+++H + ++  L++ 
Sbjct: 339 --------------VSEGF---APSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSC 381

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V V ++++ MY KCG    AR VF+ M VR+V +WNV++  Y   G  +  + + +NMV 
Sbjct: 382 VPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY-------AC 651
                     + V++  + A  + +G+    +  F +M     +E  PD +       AC
Sbjct: 442 R---------SIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSME--PDAFTVTSVLSAC 490

Query: 652 VVDLLGRAGKVEDAYQLINMMP 673
               + + GK   +Y L   MP
Sbjct: 491 ANLRMLKMGKQMHSYILRTGMP 512



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 42/138 (30%)

Query: 521 AKGKEIHAYAIR-----------NMLATDVVVG--------------------------S 543
           + G+ IHA+A++           N+LA    VG                          +
Sbjct: 226 SAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWN 285

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           +L+ +YAK G L  A  VF  MP R+ ++W ++I+     G   + ++   +MV+EG   
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEG--- 342

Query: 604 GEVKPNEVTFIALFAACS 621
               P++ T   + ++C+
Sbjct: 343 --FAPSQFTLTNVLSSCA 358


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/818 (35%), Positives = 430/818 (52%), Gaps = 50/818 (6%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           +F   A ++ V     ++ GK +H+ +           +A++LV MY +CGS +     V
Sbjct: 26  SFDSAAAVRLVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGS-LESAIDV 84

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           F +I  K  V W  +I+     G    A+  F  +L   +   +   VSV  ACS+    
Sbjct: 85  FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSS---E 141

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTI 254
           + L  GR +H  ++  G      + +AL++MY + G + DA  LF   E   D+V WN +
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRN 312
           +++ SQN    EA+    +M   GI PD V+  SV  ACS    L     K  H   L  
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHT-CLDE 260

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L  +  V +ALV+ Y  C E++C R  F  + ++    W +MI  + Q  +       
Sbjct: 261 TGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETF 320

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
              + E  G+ P  +T+ + +  C   E       +   A ++G+  D  +   L+  Y+
Sbjct: 321 HAMLLE--GVVPTRSTLFAALEGC---EDLHTARLVEAIAQEIGVATDVAIVTDLVMAYA 375

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNT-----MITGYTICGQHGDALMLLREMQNMEEEKNR 487
           R    E +  +F     R+   W+      MI  Y  C                   ++R
Sbjct: 376 RCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQC-------------------RDR 413

Query: 488 NNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHA-YAIRNMLATDVVVGSA 544
            + + L    +     P+ I  +T L  C +L+AL++G++IHA  A    L  DV +G+A
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           +V MY +CG L  AR  FD MP R+ I+WN ++ A   HG  ++  +L + M+ EG    
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEG---- 529

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
                 V F+ L +AC+H+G+V  G + F  M  D+G+ P+ +HY C+VDLLGR G++ D
Sbjct: 530 -FDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLAD 588

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A+ ++  MP   D A  W +L+GACRI+ + E G  AA+ +  L  +  + YV L NIYS
Sbjct: 589 AHGIVQAMPVPPD-AATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYS 647

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           +A  W+ A  VRK M ++G+RK PG S IE   ++H+F+  D SH QSE ++  LE +  
Sbjct: 648 AAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMG 707

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
            + + GY   T  VLH+V EE+KE LL  HSEKLAIAFG+++TP G+T+RV KNLRVC D
Sbjct: 708 AIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVD 767

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH A+KFISK+  REI++RDVRRFHHFK+G CSCGDYW
Sbjct: 768 CHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 239/554 (43%), Gaps = 44/554 (7%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           AI  +  + +  I  D   F +VL A +  + L+ G+ IH   V+ G GL  + VA+ LV
Sbjct: 112 AIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEI-VASALV 170

Query: 121 NMYGKCGSDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +MYG+CGS + D   +F  +    D V WN+MI    + G    ALE F  ML   + P 
Sbjct: 171 SMYGRCGS-LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPD 229

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW----NTFIMNALMAMYAKLGRVDD 235
             T VSV  ACS+      LR   QV G    + E     +  +  AL+  YA+ G +D 
Sbjct: 230 LVTFVSVFKACSS---SPSLR-ASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDC 285

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+  F +  +R+ VSW +++++ +Q    L AV     M L G+ P   ++ + L  C  
Sbjct: 286 AREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGC-- 342

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALW 353
            E L T + + A A    +  D + V + LV  Y  C   E   RVF    + +   AL 
Sbjct: 343 -EDLHTARLVEAIAQEIGVATDVAIV-TDLVMAYARCDGQEDAIRVFSAREEGEWDAALV 400

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH-A 412
            AMI  Y Q         L+    E  G+ P+     + + AC    A  +   IH   A
Sbjct: 401 TAMIAVYAQCRDRRSTFKLWGAAIE-RGISPDRILYITALDACASLAALSEGRQIHACVA 459

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
               L RD  + NA++ MY + G +  ++  FD M  RD +SWN M++     G+  D  
Sbjct: 460 ADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCC 519

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L R M     +  R    +L                V  GC   SA+     +      
Sbjct: 520 DLFRAMLQEGFDAERVAFLNLLSACAHAG-------LVEAGCEHFSAMTGDHGV------ 566

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGE------ 585
            + AT+      +VD+  + G L  A  +   MPV  +  TW  ++ A  ++G+      
Sbjct: 567 -VPATEHY--GCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRF 623

Query: 586 -GQEVLELLKNMVA 598
             + VLEL  N  A
Sbjct: 624 AAERVLELRANHTA 637



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 186/435 (42%), Gaps = 29/435 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL--SLGKQIHAH 102
           W   + + +++   REA+  +  M +  I PD   F +V KA +    L  S  K  H  
Sbjct: 198 WNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTC 257

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + + G G S V VA  LVN Y +CG ++    + F  + E++ VSW SMIA   + G   
Sbjct: 258 LDETGLG-SDVVVATALVNAYARCG-EIDCAREFFAAMPERNAVSWTSMIAAFAQIGHL- 314

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           LA+E F  ML   V P+  TL +    C +      L   R V   +  +G   +  I+ 
Sbjct: 315 LAVETFHAMLLEGVVPTRSTLFAALEGCED------LHTARLVEAIAQEIGVATDVAIVT 368

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            L+  YA+    +DA  +F + E+   D      +++  +Q                RGI
Sbjct: 369 DLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD +   + L AC+ L  L  G++IHA    +  L  +  +G+A+V MY  C  +   R
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             FD +  +    WNAM++   Q+   E+   LF  M +  G         +++ AC  +
Sbjct: 489 DAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQ-EGFDAERVAFLNLLSACAHA 547

Query: 400 -------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RD 451
                  E F    G HG    +    + Y    ++D+  R GR+  +  I   M V  D
Sbjct: 548 GLVEAGCEHFSAMTGDHG----VVPATEHY--GCMVDLLGRKGRLADAHGIVQAMPVPPD 601

Query: 452 TVSWNTMITGYTICG 466
             +W  ++    I G
Sbjct: 602 AATWMALMGACRIYG 616


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/846 (32%), Positives = 443/846 (52%), Gaps = 73/846 (8%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   SW+  +   +++    EA+L + ++              VL A   ++    GK
Sbjct: 226 KARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGK 271

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H  V+K G+  S   V N LV +Y + G ++    ++F  ++++D+VS+NS+I+ L +
Sbjct: 272 QLHGLVLKQGFS-SETYVCNALVTLYSRSG-NLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G  + AL  F+ M     +P   T+ S+  AC+++     L  G+Q H  +++ G  + 
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVG---ALPNGKQFHSYAIKAGMTSD 386

Query: 218 FIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            ++  +L+ +Y K   +  A   F  +                Q D   ++     QM +
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFFLCY---------------GQLDNLNKSFQIFTQMQI 431

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI P+  +  S+L  C+ L   D G++IH   L+      N +V S L+DMY    +++
Sbjct: 432 EGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQF-NVYVSSVLIDMYAKHGKLD 490

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              ++F  + +  +  W AMI GY Q++   EAL LF +M++  G+  +    +S + AC
Sbjct: 491 HALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD-QGIKSDNIGFASAISAC 549

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
              +A      IH  +   G   D  + NAL+ +Y+R G++  +   FD +  +D VSWN
Sbjct: 550 AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWN 609

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           ++++G+   G   +AL +  +M     E                  NS T  + +     
Sbjct: 610 SLVSGFAQSGYFEEALNIFAQMNKAGLE-----------------INSFTFGSAVSAAAN 652

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           ++ +  GK+IH    +    ++  V +AL+ +YAKCG ++              I+WN +
Sbjct: 653 IANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID-------------DISWNSM 699

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  HG G E L+L ++M     +  +V PN VTF+ + +ACSH G+V EG+  F  M
Sbjct: 700 ITGYSQHGCGFEALKLFEDM-----KQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSM 754

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
            + + + P P+HYACVVDLLGR+G +  A + +  MP + D A  W +LL AC +H+N++
Sbjct: 755 SEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPD-AMVWRTLLSACNVHKNID 813

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           IGE AA +L  LEP  ++ YVL+SN+Y+ +  WD     R+ MK+ GV+KEPG SW+E  
Sbjct: 814 IGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVD 873

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           + +H F AGD +H +++ ++ +L  L  R  + GYVP  + +L +    +K+     HSE
Sbjct: 874 NSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSE 933

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           +LAIAFG+L+    T + V KNLRVC DCH   K +SKI  R II+RD  RFHHFK G+C
Sbjct: 934 RLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSC 993

Query: 877 SCGDYW 882
           SC DYW
Sbjct: 994 SCKDYW 999



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 254/574 (44%), Gaps = 70/574 (12%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++ Y   G D+     VFD +  +    WN +  T             FR ML  NVE 
Sbjct: 103 LIDFYLAFG-DLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
                  V   CS        R   Q+H  ++  G E +TFI N L+ +Y K G +  AK
Sbjct: 162 DERIFAVVLRGCS--GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F++ + RD VSW  ++S LSQN    EA++   Q+              VL AC+ +E
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVE 265

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
             + GK++H   L+       ++V +ALV +Y     +    ++F  +S +    +N++I
Sbjct: 266 FFEFGKQLHGLVLKQG-FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 324

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           +G  Q  Y   AL LF KM  +    P+  T++S++ AC    A P+ +  H +AIK G+
Sbjct: 325 SGLAQQGYINRALALFKKM-NLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D  V+ +L+D+Y +   I+ +   F                   +C  +G    L + 
Sbjct: 384 TSDIVVEGSLLDLYVKCSDIKTAHEFF-------------------LC--YGQLDNLNKS 422

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
            Q   + +    V           PN  T  ++L  C  L A   G++IH   ++     
Sbjct: 423 FQIFTQMQIEGIV-----------PNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQF 471

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +V V S L+DMYAK G L+ A ++F  +   +V++W  +I  Y  H +  E L L K M 
Sbjct: 472 NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ 531

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-----MKDDYGIEPSPDHYACV 652
            +G     +K + + F +  +AC+    + +G  +  +       DD  I  +      +
Sbjct: 532 DQG-----IKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNA------L 580

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           V L  R GKV +AY   + +  + D   +W+SL+
Sbjct: 581 VSLYARCGKVREAYAAFDQIYAK-DNV-SWNSLV 612



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 229/551 (41%), Gaps = 124/551 (22%)

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
           G  L+D Y    ++ C   VFD +  + ++ WN +      N +  E LM       V G
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIF-----NTFIAERLM-----GRVPG 149

Query: 382 LWPNATT---------MSSVVPACV-RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           L+    T          + V+  C   + +F   E IH   I  G     ++ N L+D+Y
Sbjct: 150 LFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLY 209

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G +  +K +F++++ RD+VSW  MI+G +  G   +A++L  ++             
Sbjct: 210 FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI------------- 256

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                             VL  C  +     GK++H   ++   +++  V +ALV +Y++
Sbjct: 257 ------------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSR 298

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            G L+ A ++F  M  R+ +++N +I      G     L L K M  +       KP+ V
Sbjct: 299 SGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ-----KPDCV 353

Query: 612 TFIALFAACS-----------HSGMVSEGM-----------DLFYKMKDDYGIEPSPDHY 649
           T  +L +AC+           HS  +  GM           DL+ K  D   I+ + + +
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSD---IKTAHEFF 410

Query: 650 ACV--VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE-IAAQNL- 705
            C   +D L ++ ++    Q+  ++P +F     + S+L  C      ++GE I  Q L 
Sbjct: 411 LCYGQLDNLNKSFQIFTQMQIEGIVPNQF----TYPSILKTCTTLGATDLGEQIHTQVLK 466

Query: 706 --FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
             F     V+S   +L ++Y+     D A+ + +++KE  V      SW          +
Sbjct: 467 TGFQFNVYVSS---VLIDMYAKHGKLDHALKIFRRLKENDV-----VSWT-------AMI 511

Query: 764 AGDGSHQQ-SEQLHGFLENLSERMRKEGYVPD--------TSC----VLHNVNEEEKETL 810
           AG   H + +E L     NL + M+ +G   D        ++C     L    +   ++ 
Sbjct: 512 AGYTQHDKFTEAL-----NLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSC 566

Query: 811 LCGHSEKLAIA 821
           L G+S+ L+I 
Sbjct: 567 LSGYSDDLSIG 577



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 147/373 (39%), Gaps = 66/373 (17%)

Query: 362 QNEYDEEALML-FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
           +NE D  A  + ++ + E  G+  N+ T   ++  C+ S +F D           GL   
Sbjct: 56  ENEMDGNASGIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYD-----------GL--- 101

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
                 L+D Y   G +  +  +FD+M +R    WN +   +      G    L R M  
Sbjct: 102 -----KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLT 156

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC-GALSALAKGKEIHAYAIRNMLATDV 539
              E         DE +            VL GC G   +    ++IHA  I +   +  
Sbjct: 157 KNVE--------FDERIF---------AVVLRGCSGNAVSFRFVEQIHAKTITSGFESST 199

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + + L+D+Y K G L+ A++VF+ +  R+ ++W  +I     +G  +E + L   +V  
Sbjct: 200 FICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLS 259

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLG 657
                     +V F   F    H  ++ +G               S + Y C  +V L  
Sbjct: 260 AC-------TKVEFFE-FGKQLHGLVLKQGF--------------SSETYVCNALVTLYS 297

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLG--ACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           R+G +  A Q+ + M    D+  +++SL+   A + + N  +      NL   +PD  + 
Sbjct: 298 RSGNLSSAEQIFHCMSQR-DRV-SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTV 355

Query: 716 YVLLSNIYSSAQL 728
             LLS   S   L
Sbjct: 356 ASLLSACASVGAL 368


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/720 (37%), Positives = 391/720 (54%), Gaps = 67/720 (9%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +L+A +A  GR+ DA   F +     RD V  N ++S+ ++      AV     +   G
Sbjct: 98  TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157

Query: 279 -IKPDGVSIASVLPACSHLEMLDTGK--EIHAYALRNDILIDNSFVGSALVDMYCNCR-- 333
            ++PD  S  +++ A   +  L      ++H   L++      S V +AL+ +Y  C   
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLS-VSNALIALYMKCDTP 216

Query: 334 --------------------------------EVECGRRVFDFISDKKIALWNAMITGYG 361
                                           +V   R VF+ +  K   +WNAMI+GY 
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276

Query: 362 QNEYDEEALMLFIKMEEVAGLWP-NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG-- 418
           Q+    +A  LF +M  V+   P +  T +SV+ AC  +  F   + +HG  I+L     
Sbjct: 277 QSGMCADAFELFRRM--VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 334

Query: 419 --RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                 V NAL+ +YS+ G+I I+K IFD M ++D VSWNT+++GY   G    A+ + +
Sbjct: 335 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 394

Query: 477 EMQNMEEEKNRNNVYD-----LDETVLR---------PKPNSITLMTVLPGCGALSALAK 522
            M    +      V       L E  L+          KP   T    +  CG L AL  
Sbjct: 395 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 454

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+++HA+ ++         G+AL+ MYAKCG +N AR VF +MP  + ++WN +I A G 
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E LEL   MVAEG     + P+ ++F+ +  AC+H+G+V EG   F  MK D+GI
Sbjct: 515 HGHGREALELFDQMVAEG-----IDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 569

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P  DHYA ++DLLGR+G++ +A  LI  MP E      W ++L  CR + ++E G  AA
Sbjct: 570 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE-PTPSIWEAILSGCRTNGDMEFGAYAA 628

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             LF + P     Y+LLSN YS+A  W  A  VRK M++ GV+KEPGCSWIE G +IH F
Sbjct: 629 DQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVF 688

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD  H ++++++ FLE +  RMRK GYVPDT  VLH++   EKE +L  HSEKLA+ F
Sbjct: 689 LVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGF 748

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+L  PPG T+ V KNLR+C DCH A  F+SK   REI++RDVRRFHHFK+G CSCG+YW
Sbjct: 749 GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 214/475 (45%), Gaps = 90/475 (18%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGK--QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD- 129
           ++PD+++F A++ AV  + +L+     Q+H  V+K G   + ++V+N L+ +Y KC +  
Sbjct: 159 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSG-AAAVLSVSNALIALYMKCDTPE 217

Query: 130 -MWDVYKVFDRITEKDQVSWNSMIATLCRF--------------GKWDL----------- 163
             WD  KV D + +KD ++W +M+    R               GK+D+           
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277

Query: 164 ------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-----V 212
                 A E FR M+   V    FT  SV  AC+N         G+ VHG  +R     V
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGF---FVHGKSVHGQIIRLQPNFV 334

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLE--- 266
            E    + NAL+ +Y+K G++  AK +F +   +D+VSWNTI+S    +   DK +E   
Sbjct: 335 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 394

Query: 267 -------------------------AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
                                    A+    QM    +KP   + A  + AC  L  L  
Sbjct: 395 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 454

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+++HA+ ++      NS  G+AL+ MY  C  V   R VF  + +     WNAMI+  G
Sbjct: 455 GRQLHAHLVQCGFEASNS-AGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALG 513

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLG 416
           Q+ +  EAL LF +M    G+ P+  +  +++ AC  + A    EG H          + 
Sbjct: 514 QHGHGREALELFDQM-VAEGIDPDRISFLTILTAC--NHAGLVDEGFHYFESMKRDFGIS 570

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
            G D Y +  L+D+  R GRI  ++ +   M    T S W  +++G   C  +GD
Sbjct: 571 PGEDHYAR--LIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG---CRTNGD 620



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 39/293 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    +S    +A   +  M    +  D F F +VL A A       GK +H  ++
Sbjct: 268 WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQII 327

Query: 105 KYGYGL---SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           +        +++ V N LV +Y K G  +    ++FD +  KD VSWN++++     G  
Sbjct: 328 RLQPNFVPEAALPVNNALVTLYSK-GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 386

Query: 162 DLALEAFRMMLYSN-------------------------------VEPSSFTLVSVALAC 190
           D A+E F++M Y N                               V+P  +T      AC
Sbjct: 387 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 446

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
             L     L+ GRQ+H + ++ G E +    NAL+ MYAK G V+DA+ +F    + D V
Sbjct: 447 GELG---ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 503

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           SWN ++S+L Q+    EA+    QM   GI PD +S  ++L AC+H  ++D G
Sbjct: 504 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 556



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 10/222 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +          +A+  + +M   D++P ++ +   + A   +  L  G+Q+HAH+
Sbjct: 403 SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHL 462

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+  S+ +  N L+ MY KCG+ + D   VF  +   D VSWN+MI+ L + G    
Sbjct: 463 VQCGFEASN-SAGNALLTMYAKCGA-VNDARLVFLVMPNLDSVSWNAMISALGQHGHGRE 520

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGN-SLRVGEWNTFIMN 221
           ALE F  M+   ++P   + +++  AC++    D G      +  +  +  GE +     
Sbjct: 521 ALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH---YA 577

Query: 222 ALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQN 261
            L+ +  + GR+ +A+ L K+  FE    + W  I+S    N
Sbjct: 578 RLIDLLGRSGRIGEARDLIKTMPFEPTPSI-WEAILSGCRTN 618


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/620 (40%), Positives = 357/620 (57%), Gaps = 26/620 (4%)

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P  +S A V    + L ML  G ++HA+ L    L   + VGS +V  Y +  +++    
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRG-LQPTALVGSKMVAFYASSGDIDSSVS 126

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF+ I +    L+N+MI  Y +  + E  +  +  M    G   +  T   V+ + V   
Sbjct: 127 VFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHS-WGFTGDYFTFPFVLKSSVELL 185

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +    + +HG  +++GL  D YV  +L+ +Y + G I  +  +FD+M +RD  SWN ++ 
Sbjct: 186 SVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 245

Query: 461 GYTICGQHGDALMLLREM--QNMEEEKNRNNVYD-----------LDETVLRP---KPNS 504
           GYT  G    AL +   M  +N+       + Y             DE V      +PN 
Sbjct: 246 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           +T+M+VLP C  LS L +G++IH  A R  L ++  V  AL  MYAKCG L  AR  FD 
Sbjct: 306 VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 365

Query: 565 MPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           +    +N+I WN +I AY  +G G + +   + M+  G     ++P+++TF  L + CSH
Sbjct: 366 LNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG-----IQPDDITFTGLLSGCSH 420

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           SG+V  G+  F  M   Y I P  +HYACV DLLGRAG++ +A +L+  MP     +  W
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPS-IW 479

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            SLL ACR H+N+E+ E AA+ LF+LEP+   +YVLLSN+Y+ A  W +   +R  +K  
Sbjct: 480 GSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 539

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           G +K PGCSWIE   + H FL GD SH Q ++++ FLE L E+M+  GY PDTS VLH++
Sbjct: 540 GTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDI 599

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           +EEEKE  L  HSEKLA+AFGILNTP  T +RV KNLR+C DCH A  FIS+I  RE+I+
Sbjct: 600 SEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIV 659

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD+ RFHHFK G CSCGDYW
Sbjct: 660 RDINRFHHFKGGCCSCGDYW 679



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 41/290 (14%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R+ AR       + +Y  M       D F FP VLK+   +  + +GK +H  +++ G 
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGL 202

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
               + VA +L+ +YGKCG ++ D  KVFD +T +D  SWN+++A   + G  D AL  F
Sbjct: 203 QFD-LYVATSLIILYGKCG-EINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIF 260

Query: 169 RMMLYSN---------------------------------VEPSSFTLVSVALACSNLSR 195
             M + N                                 V P+  T++SV  AC+ LS 
Sbjct: 261 ERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 320

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE--DRDLVSWN 252
              L  GRQ+H  + R+G   N  ++ AL AMYAK G + DA+  F      +++L++WN
Sbjct: 321 ---LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 377

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           T++++ +     L+AV   R+M   GI+PD ++   +L  CSH  ++D G
Sbjct: 378 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 202/457 (44%), Gaps = 51/457 (11%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P   ++  V + + G+  L LG Q+HAH++  G   +++ V + +V  Y   G D+    
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTAL-VGSKMVAFYASSG-DIDSSV 125

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            VF+ I E   + +NSMI    R+G  +  +  +  M         FT   V  +   L 
Sbjct: 126 SVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELL 185

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD------ 247
               + +G+ VHG  LR+G +++ ++  +L+ +Y K G ++DA  +F +   RD      
Sbjct: 186 ---SVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNA 242

Query: 248 -------------------------LVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIK 280
                                    +VSW T++S  SQ+    +A+    +M     G++
Sbjct: 243 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVR 302

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ V+I SVLPAC+ L  L+ G++IH  A R   L  N+ V  AL  MY  C  +   R 
Sbjct: 303 PNWVTIMSVLPACAQLSTLERGRQIHELACRMG-LNSNASVLIALTAMYAKCGSLVDARN 361

Query: 341 VFDFI--SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            FD +  ++K +  WN MIT Y    +  +A+  F +M + AG+ P+  T + ++  C  
Sbjct: 362 CFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQ-AGIQPDDITFTGLLSGCSH 420

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
           S           H         R    A + D+  R GR+  +  +  +M +    S W 
Sbjct: 421 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWG 480

Query: 457 TMITGYTICGQHGDALM---LLREMQNMEEEKNRNNV 490
           +++     C +H +  M     R++  +E E   N V
Sbjct: 481 SLLAA---CRKHRNLEMAETAARKLFVLEPENTGNYV 514



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 200/483 (41%), Gaps = 72/483 (14%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM-AMYAKLGRVDDA 236
           P    ++S A     L+  + L+LG QVH + L  G   T ++ + M A YA  G +D +
Sbjct: 65  PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSS 124

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
            ++F    +   + +N+++ + ++       V     M   G   D  +   VL +   L
Sbjct: 125 VSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA- 355
             +  GK +H   LR  +  D  +V ++L+ +Y  C E+    +VFD ++ + ++ WNA 
Sbjct: 185 LSVWMGKCVHGLILRIGLQFD-LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNAL 243

Query: 356 ------------------------------MITGYGQNEYDEEALMLFIKM-EEVAGLWP 384
                                         MI+GY Q+   ++AL LF +M +E +G+ P
Sbjct: 244 LAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP 303

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  T+ SV+PAC +         IH  A ++GL  +  V  AL  MY++ G +  ++  F
Sbjct: 304 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCF 363

Query: 445 DDMEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           D +    ++ ++WNTMIT Y   G    A+   REM     +                 P
Sbjct: 364 DKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ-----------------P 406

Query: 503 NSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           + IT   +L GC     +  G K  +  +    +   V   + + D+  + G L  A ++
Sbjct: 407 DDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKL 466

Query: 562 FDLMPV-RNVITWNVIIMAYGMH---------GEGQEVLE--------LLKNMVAEGSRG 603
              MP+      W  ++ A   H              VLE        LL NM AE  R 
Sbjct: 467 VGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRW 526

Query: 604 GEV 606
            EV
Sbjct: 527 QEV 529


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/635 (39%), Positives = 370/635 (58%), Gaps = 59/635 (9%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           ++T K++H   L +  L  N  VG  L+ +Y  C E    R +FD I+DK +  +N MI 
Sbjct: 34  INTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIR 93

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y  N   ++AL+++  M    G  P+  T   V+ A  RS++      IHG  +K+GL 
Sbjct: 94  SYVNNHLYKDALLVYKTMY-TQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLD 152

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            + YV N L+ MY +   ++ ++ + D++  RD VSWN+M++ Y   G+  DAL L REM
Sbjct: 153 LNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREM 212

Query: 479 QNMEEEKN---------------RNNVYDLDETVLR---------------------PK- 501
           + +  + N                +NV  + E  L+                     PK 
Sbjct: 213 EALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKE 272

Query: 502 --------------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                         P+ +++++VLP  G LSAL+ G+ +H +A R  L  ++++ +AL+D
Sbjct: 273 AVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALID 332

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKCGCL  AR VF+ M  R+V++W  II AYG  G+G++ + +   M     R   + 
Sbjct: 333 MYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEM-----RNSGLN 387

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ + F+++ AACSH+G++ +G   ++ +  + GI P  +H+ACVVDLLGRAGK+++AY 
Sbjct: 388 PDSIAFVSVLAACSHAGLLDDGR-YYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYG 446

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP E D+   W  LL ACR++ N+ IG +AA  L +L P+ + +YVLLSNIY+ A 
Sbjct: 447 FIRQMPLEPDER-VWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAG 505

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W     +R  M+  G++K PG S +E  D +H FLAGD SH QS++++  L+ L  +M+
Sbjct: 506 RWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMK 565

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + GY+P+T   LH+V EE+KE  L  HSEKLA+AF I+NT PGT IRV KNLRVC DCH 
Sbjct: 566 ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHV 625

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A K ISKI  REII+RD  RFHHF+ G CSCGDYW
Sbjct: 626 AAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 223/477 (46%), Gaps = 57/477 (11%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           D++  K++H  V+   Y   + +V   L+ +Y  CG      + +FD IT+K+ V +N M
Sbjct: 33  DINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARH-IFDEITDKNVVFFNVM 91

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I +      +  AL  ++ M      P  +T   V  A S   R D L +G Q+HG  L+
Sbjct: 92  IRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASS---RSDSLWVGLQIHGAVLK 148

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G + N ++ N L+AMY K   + +A+ +      RD+VSWN++VS  +QN +F +A+  
Sbjct: 149 IGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALEL 208

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M    +KP+  ++AS+LPA +     +T  +   Y                      
Sbjct: 209 CREMEALNLKPNDCTMASLLPAVT-----NTTSDNVLYV--------------------- 242

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
                   + +F  ++ K +  WN MI  Y  N   +EA++L+ +M E  G+ P+  ++ 
Sbjct: 243 --------KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQM-EANGVEPDVVSIV 293

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           SV+PA     A      +H  A +  L  +  ++NAL+DMY++ G +  ++ +F+ M+ R
Sbjct: 294 SVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR 353

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSW ++I+ Y  CGQ  DA+ +  EM+N                     P+SI  ++V
Sbjct: 354 DVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLN-----------------PDSIAFVSV 396

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           L  C     L  G+          +   +   + +VD+  + G ++ A      MP+
Sbjct: 397 LAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPL 453



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 197/414 (47%), Gaps = 40/414 (9%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   ++ +++A+L Y  M      PD + +P VLKA +    L +G QIH  V+K G 
Sbjct: 92  IRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGL 151

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L ++ V N L+ MYGKC S + +  +V D I  +D VSWNSM++   + G+++ ALE  
Sbjct: 152 DL-NLYVGNGLIAMYGKCKS-LKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELC 209

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M   N++P+  T+ S+  A +N +  + L +                           
Sbjct: 210 REMEALNLKPNDCTMASLLPAVTNTTSDNVLYV--------------------------- 242

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                   K +F     + ++SWN +++    N    EAV+   QM   G++PD VSI S
Sbjct: 243 --------KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVS 294

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPA   L  L  G+ +H +A R   L+ N  + +AL+DMY  C  +   R VF+ +  +
Sbjct: 295 VLPAYGDLSALSLGRRVHKFAERKK-LLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR 353

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  W ++I+ YG+     +A+ +F +M   +GL P++    SV+ AC  +    D    
Sbjct: 354 DVVSWTSIISAYGKCGQGRDAVAVFAEMRN-SGLNPDSIAFVSVLAACSHAGLLDDGRYY 412

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
                + G+         ++D+  R G+I+ +      M +  D   W  +++ 
Sbjct: 413 FNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 46/263 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     ++  +EA++ Y +M  + ++PD  +  +VL A   +  LSLG+++H   
Sbjct: 256 SWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFA 315

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +    L ++ + N L++MY KCG  + D   VF+++  +D VSW S+I+   + G+   
Sbjct: 316 ERKKL-LPNLLLENALIDMYAKCGC-LRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRD 373

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M  S + P S   VSV  ACS+                               
Sbjct: 374 AVAVFAEMRNSGLNPDSIAFVSVLAACSH------------------------------- 402

Query: 224 MAMYAKLGRVDDAKTLFKSFED----RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
                  G +DD +  F    +      L  +  +V  L +  K  EA  F+RQM L   
Sbjct: 403 ------AGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPL--- 453

Query: 280 KPDGVSIASVLPACSHLEMLDTG 302
           +PD      +L AC     ++ G
Sbjct: 454 EPDERVWGPLLSACRVYSNMNIG 476


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/662 (39%), Positives = 379/662 (57%), Gaps = 62/662 (9%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           LM  YA  G     + +F     +++V +N ++ S   N  + +A++  + MA  GI PD
Sbjct: 77  LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCREVECGRR 340
             +   VL A S  E L  G +IHA  +R  + + N FVG+ L+ MY  C C    C  R
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDL-NVFVGNGLISMYGKCGCLVEAC--R 193

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           V D +  + +  WN+++ G  +N   ++AL +  +ME + GL P+A TM+S++PA     
Sbjct: 194 VLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME-LLGLKPDAGTMASLLPA----- 247

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                                 V N  +D       +   K +F  +  +  VSWN MI 
Sbjct: 248 ----------------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIA 279

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y       +A+ +  +M+              D  V    P++I++ +VLP CG LSAL
Sbjct: 280 VYMNNSMPAEAVDIFLQME--------------DHAV---DPDAISIASVLPACGDLSAL 322

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+ IH Y +R  L  ++++ +AL+DMYAKCGCL +AR VFD M  R+V++W  +I AY
Sbjct: 323 LLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAY 382

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
           GM+G+G++ + L   M   G     + P+ + F+++ +ACSH+G++ EG   F  M ++ 
Sbjct: 383 GMNGKGRDAVSLFSRMQDLG-----LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC 437

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            I P  +H+ C+VDLLGRAG+V++AY  I  MP E ++   W +LL ACR++ N+ IG +
Sbjct: 438 KIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER-VWGALLSACRVYSNMIIGLL 496

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA  LF L P+ + +YVLLSNIY+ A  W+    VR  MK  G++K PG S  E  + +H
Sbjct: 497 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 556

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            FLAGD SH QS+Q++  L+    +M++ GYVP+T   LH+V EE+KE  L  HSEKLAI
Sbjct: 557 TFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAI 616

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AF ILNT PG+ IR+ KNLRVC DCH A K ISKI  REI +RD  RFHHF NG CSCGD
Sbjct: 617 AFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGD 676

Query: 881 YW 882
           YW
Sbjct: 677 YW 678



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 39/348 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   ++ + +A+L +  M    I PD++ +P VLKA +G +DL +G QIHA VV+ G 
Sbjct: 109 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 168

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L +V V N L++MYGKCG  + +  +V D++  +D VSWNS++A   R G++D ALE  
Sbjct: 169 DL-NVFVGNGLISMYGKCGC-LVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVC 226

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           + M    ++P + T+ S+  A +N                                    
Sbjct: 227 KEMELLGLKPDAGTMASLLPAVTNTC---------------------------------- 252

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
            L  V   K +F    ++ LVSWN +++    N    EAV    QM    + PD +SIAS
Sbjct: 253 -LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIAS 311

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPAC  L  L  G+ IH Y +R   L  N  + +AL+DMY  C  +E  R VFD +  +
Sbjct: 312 VLPACGDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 370

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  W +MI+ YG N    +A+ LF +M+++ GL P++    SV+ AC
Sbjct: 371 DVVSWTSMISAYGMNGKGRDAVSLFSRMQDL-GLNPDSIAFVSVLSAC 417



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 239/495 (48%), Gaps = 67/495 (13%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           D+   K++H+ +       S+ ++   L+  Y  CG + W    +FD I +K+ V +N M
Sbjct: 50  DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCG-EPWSTRHIFDEIPKKNVVFFNVM 108

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I +      +  AL  F+ M    ++P  +T   V  A S     + L +G Q+H   +R
Sbjct: 109 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSG---SEDLWVGMQIHAAVVR 165

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           VG + N F+ N L++MY K G + +A  +      RD+VSWN++V+  ++N +F +A+  
Sbjct: 166 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEV 225

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            ++M L G+KPD  ++AS+LPA +                 N  L + SFV         
Sbjct: 226 CKEMELLGLKPDAGTMASLLPAVT-----------------NTCLDNVSFV--------- 259

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
                   + +F  +++K +  WN MI  Y  N    EA+ +F++ME+ A + P+A +++
Sbjct: 260 --------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA-VDPDAISIA 310

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           SV+PAC    A      IH + ++  L  +  ++NAL+DMY++ G +E ++ +FD M+ R
Sbjct: 311 SVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR 370

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSW +MI+ Y + G+  DA+ L   MQ+                 L   P+SI  ++V
Sbjct: 371 DVVSWTSMISAYGMNGKGRDAVSLFSRMQD-----------------LGLNPDSIAFVSV 413

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFDLM 565
           L  C     L +G+    Y  + M     +V        +VD+  + G ++ A      M
Sbjct: 414 LSACSHAGLLDEGR----YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQM 469

Query: 566 PVR-NVITWNVIIMA 579
           P+  N   W  ++ A
Sbjct: 470 PMEPNERVWGALLSA 484



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 41/269 (15%)

Query: 38  QTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           Q  C++  SW   +   AR+ QF +A+    EM    ++PD     ++L AV        
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT------- 249

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
                                NT       C  ++  V ++F ++  K  VSWN MIA  
Sbjct: 250 ---------------------NT-------CLDNVSFVKEMFMKLANKSLVSWNVMIAVY 281

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                   A++ F  M    V+P + ++ SV  AC +LS    L LGR++H   +R   +
Sbjct: 282 MNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLS---ALLLGRRIHEYVVRKRLQ 338

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N  + NAL+ MYAK G ++ A+ +F   + RD+VSW +++S+   N K  +AV    +M
Sbjct: 339 PNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRM 398

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGK 303
              G+ PD ++  SVL ACSH  +LD G+
Sbjct: 399 QDLGLNPDSIAFVSVLSACSHAGLLDEGR 427



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 5/183 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  +++M    + PD  +  +VL A   +  L LG++IH +VV+      ++ + N L
Sbjct: 289 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQ-PNLLLENAL 347

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MY KCG   +   +VFD++  +D VSW SMI+     GK   A+  F  M    + P 
Sbjct: 348 IDMYAKCGCLEY-AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 406

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKT 238
           S   VSV  ACS+    D  R   ++     + V     F+   ++ +  + G+VD+A  
Sbjct: 407 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV--CMVDLLGRAGQVDEAYG 464

Query: 239 LFK 241
             K
Sbjct: 465 FIK 467



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 33/216 (15%)

Query: 524 KEIHA-YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           K++H+   I + L ++  +G  L+  YA CG     R +FD +P +NV+ +NV+I +Y  
Sbjct: 55  KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----------HSGMVSEGMD 631
           +    + L + KNM   G     + P+  T+  +  A S           H+ +V  G+D
Sbjct: 115 NHLYSDALLVFKNMAGHG-----IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-R 690
           L   + +             ++ + G+ G + +A ++++ MP       +W+SL+  C R
Sbjct: 170 LNVFVGNG------------LISMYGKCGCLVEACRVLDQMPCR--DVVSWNSLVAGCAR 215

Query: 691 IHQNVEIGEIAAQ-NLFLLEPDVASHYVLLSNIYSS 725
             Q  +  E+  +  L  L+PD  +   LL  + ++
Sbjct: 216 NGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNT 251


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/695 (35%), Positives = 395/695 (56%), Gaps = 31/695 (4%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEWNTFI-MNALMAMYAKLGRVDDAKTLFKSFE--DRD 247
           +N ++   L+   Q+H   +      +   +N L+ +YAK G +     LF ++     +
Sbjct: 105 NNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTN 164

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +V+W T+++ LS+++K  +A+ F  +M   GI P+  + +++LPAC+H  +L  G++IHA
Sbjct: 165 VVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHA 224

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
             +     +++ FV +AL+DMY  C  +     VFD +  + +  WN+MI G+ +N+   
Sbjct: 225 L-IHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYG 283

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            A+ +F    EV  L P+  ++SSV+ AC         + +HG  +K GL    YV+N+L
Sbjct: 284 RAIGVF---REVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY + G  E +  +F     RD V+WN MI G   C     A    + M         
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAM--------- 391

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                + E V   +P+  +  ++     +++AL +G  IH++ ++     +  + S+LV 
Sbjct: 392 -----IREGV---EPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVT 443

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY KCG +  A +VF      NV+ W  +I  +  HG   E ++L + M+ EG     V 
Sbjct: 444 MYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEG-----VV 498

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P  +TF+++ +ACSH+G + +G   F  M + + I+P  +HYAC+VDLLGR G++E+A +
Sbjct: 499 PEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACR 558

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP E D    W +LLGAC  H NVE+G   A+ LF LEPD   +Y+LLSNIY    
Sbjct: 559 FIESMPFEPDSL-VWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHG 617

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           + ++A +VR+ M   GVRKE GCSWI+  +    F A D SH ++++++G L+ L E ++
Sbjct: 618 MLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIK 677

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + GYV +T    ++V   E+++L C HSEKLA+AFG+L  PPG+ +R+ KNLR C DCH 
Sbjct: 678 RRGYVAETQFATNSVEGSEEQSLWC-HSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHT 736

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             KF S+I  REII+RD+ RFH F NG+CSC DYW
Sbjct: 737 VMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 222/437 (50%), Gaps = 23/437 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   +RSN+  +A+  +  M  + I P++F F A+L A A    LS G+QIHA +
Sbjct: 167 TWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALI 226

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+ + L+   VA  L++MY KCGS M     VFD +  ++ VSWNSMI    +   +  
Sbjct: 227 HKHCF-LNDPFVATALLDMYAKCGS-MLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGR 284

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           A+  FR +L  ++ P   ++ SV  AC+ L   D    G+QVHG+ ++ G     ++ N+
Sbjct: 285 AIGVFREVL--SLGPDQVSISSVLSACAGLVELD---FGKQVHGSIVKRGLVGLVYVKNS 339

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G  +DA  LF    DRD+V+WN ++    +   F +A  + + M   G++PD
Sbjct: 340 LVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPD 399

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             S +S+  A + +  L  G  IH++ L+    + NS + S+LV MY  C  +    +VF
Sbjct: 400 EASYSSLFHASASIAALTQGTMIHSHVLKTG-HVKNSRISSSLVTMYGKCGSMLDAYQVF 458

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
               +  +  W AMIT + Q+    EA+ LF +M    G+ P   T  SV+ AC  +   
Sbjct: 459 RETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN-EGVVPEYITFVSVLSACSHTGKI 517

Query: 403 PD-----KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWN 456
            D         + H IK GL  + Y    ++D+  R+GR+E +    + M    D++ W 
Sbjct: 518 DDGFKYFNSMANVHNIKPGL--EHYA--CMVDLLGRVGRLEEACRFIESMPFEPDSLVWG 573

Query: 457 TMITGYTICGQHGDALM 473
            ++     CG+H +  M
Sbjct: 574 ALLGA---CGKHANVEM 587



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 247/519 (47%), Gaps = 34/519 (6%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L   A ++ L    QIH+ +V      +S+   NTL+ +Y KCGS +     +F+    
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTN-NHASLANINTLLLLYAKCGS-IHHTLLLFNTYPH 160

Query: 143 --KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
              + V+W ++I  L R  K   AL  F  M  + + P+ FT  ++  AC++ +    L 
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAAL---LS 217

Query: 201 LGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
            G+Q+H    +    N  F+  AL+ MYAK G +  A+ +F     R+LVSWN+++    
Sbjct: 218 EGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFV 277

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +N  +  A+   R++   G  PD VSI+SVL AC+ L  LD GK++H   ++   L+   
Sbjct: 278 KNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRG-LVGLV 334

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           +V ++LVDMYC C   E   ++F    D+ +  WN MI G  +    E+A   F  M   
Sbjct: 335 YVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIR- 393

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ P+  + SS+  A     A      IH H +K G  ++  + ++L+ MY + G +  
Sbjct: 394 EGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLD 453

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +F + +  + V W  MIT +   G   +A+ L  EM              L+E V+ 
Sbjct: 454 AYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM--------------LNEGVV- 498

Query: 500 PKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             P  IT ++VL  C     +  G K  ++ A  + +   +   + +VD+  + G L  A
Sbjct: 499 --PEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEA 556

Query: 559 RRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELL 593
            R  + MP   + + W  ++ A G H     G+EV E L
Sbjct: 557 CRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERL 595



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 47/257 (18%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           R   F +A   +  M R  ++PD  ++ ++  A A I  L+ G  IH+HV+K G+ + + 
Sbjct: 377 RCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGH-VKNS 435

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            ++++LV MYGKCGS M D Y+VF    E + V W +MI    + G  + A++ F  ML 
Sbjct: 436 RISSSLVTMYGKCGS-MLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN 494

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRV 233
             V P   T VSV  ACS+                                      G++
Sbjct: 495 EGVVPEYITFVSVLSACSH-------------------------------------TGKI 517

Query: 234 DDAKTLFKSFED-----RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           DD    F S  +       L  +  +V  L +  +  EA  F+  M     +PD +   +
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPF---EPDSLVWGA 574

Query: 289 VLPACSHLEMLDTGKEI 305
           +L AC     ++ G+E+
Sbjct: 575 LLGACGKHANVEMGREV 591



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM- 565
           L  +L     L +L    +IH+  +       +   + L+ +YAKCG ++    +F+   
Sbjct: 100 LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYP 159

Query: 566 -PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            P  NV+TW  +I       +  + L     M   G     + PN  TF A+  AC+H+ 
Sbjct: 160 HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG-----IYPNHFTFSAILPACAHAA 214

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           ++SEG  + + +   +     P     ++D+  + G +  A  + + MP       +W+S
Sbjct: 215 LLSEGQQI-HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR--NLVSWNS 271

Query: 685 LL 686
           ++
Sbjct: 272 MI 273


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/631 (39%), Positives = 378/631 (59%), Gaps = 32/631 (5%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           + +L  + +  EA++   QMA+ G +       ++L  C     +  G+ +H + ++   
Sbjct: 65  LKTLCSSGQLKEALL---QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCY 121

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L  + ++ + L+ +Y  C  +   R +FD +  K +  W AMI+ Y Q  +  EAL LF+
Sbjct: 122 L-PSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFV 180

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M   +   PN  T ++++ +C  S  F     IH  AIK       +V ++L+DMY++ 
Sbjct: 181 EMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKS 239

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           GRI  +  +F  +  RD V+   +I+GY   G   +AL L R++Q               
Sbjct: 240 GRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQ--------------- 284

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +     NS+T  +VL     L+AL  GK++H++ +R+   + VV+ ++L+DMY+KCG 
Sbjct: 285 --IEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGN 342

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           + +ARR+FD MP R  I+WN +++ Y  HG  +EVLEL K M  E     +VKP+ +T++
Sbjct: 343 VCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN----KVKPDSITYL 398

Query: 615 ALFAACSHSGMVSEGMDLFYKM---KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           A+ + CSH  +   G+++FY M   KD  GIEP   HY CVVDLLGRAG+VE+A+  I  
Sbjct: 399 AVLSGCSHGQLEDMGLEIFYNMVNGKD--GIEPDIGHYGCVVDLLGRAGRVEEAFDFIKK 456

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP     A  W SLLG+CR+H +VEIG I  Q L  LEP+ A +YV+LSN+Y+SA  W+ 
Sbjct: 457 MPF-VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWED 515

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
             ++R  M+E  V KEPG SW+E    +H F A D +H + E++   ++ LS + +++GY
Sbjct: 516 MRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGY 575

Query: 792 VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
           VPD SCVL++V+EE+KE +L GHSEKLA+AFG++ TP GTTIRV KNLR+C DCH   KF
Sbjct: 576 VPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKF 635

Query: 852 ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +S++ +R +ILRD  RFH+   G CSCGDYW
Sbjct: 636 VSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 230/452 (50%), Gaps = 23/452 (5%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +L++   S Q +EA+L    + R +++ +   +  +L      + +  G+++H H++K  
Sbjct: 64  NLKTLCSSGQLKEALLQMAILGR-EVKFE--GYDTILNECVSQRAIREGQRVHTHMIKTC 120

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
           Y L SV +   L+ +Y KC   + D  ++FD + +K+ VSW +MI+   + G    AL  
Sbjct: 121 Y-LPSVYLRTRLIVLYNKCDC-LGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNL 178

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMNALMAM 226
           F  ML S+ EP+ FT  ++  +C       G   GRQ+H  ++ R  E + F+ ++L+ M
Sbjct: 179 FVEMLRSDTEPNHFTFATILTSCYG---SLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 235

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK GR+ DA  +F    +RD+V+   I+S  +Q     EA+   RQ+ + G+  + V+ 
Sbjct: 236 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 295

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYCNCREVECGRRVFDF 344
           ASVL A S L  L+ GK++H++ LR+      S+V   ++L+DMY  C  V   RR+FD 
Sbjct: 296 ASVLTALSGLAALNHGKQVHSHVLRSG---QYSYVVLLNSLIDMYSKCGNVCYARRIFDS 352

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + ++    WNAM+ GY ++    E L LF  M E   + P++ T  +V+  C   +    
Sbjct: 353 MPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDM 412

Query: 405 KEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
              I  + +  K G+  D      ++D+  R GR+E +      M    T + W +++  
Sbjct: 413 GLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 472

Query: 462 YTICGQHGD---ALMLLREMQNMEEEKNRNNV 490
              C  H D    +++ +++  +E E   N V
Sbjct: 473 ---CRVHSDVEIGIIVGQKLLELEPENAGNYV 501



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 166/322 (51%), Gaps = 17/322 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++     EA+  ++EM RSD +P++F F  +L +  G      G+QIH+  
Sbjct: 158 SWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIA 217

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  Y  S + V ++L++MY K G  + D + VF  + E+D V+  ++I+   + G  + 
Sbjct: 218 IKRNYE-SHMFVGSSLLDMYAKSGR-ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           AL+ FR +    +  +S T  SV  A S L+    L  G+QVH + LR G+++   ++N+
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLA---ALNHGKQVHSHVLRSGQYSYVVLLNS 332

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
           L+ MY+K G V  A+ +F S  +R  +SWN ++   S++    E +   + M     +KP
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 392

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYAL--RNDILIDNSFVGSALVDMYCNCREVECGR 339
           D ++  +VL  CSH ++ D G EI    +  ++ I  D    G  +VD+      VE   
Sbjct: 393 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG-CVVDLLGRAGRVE--- 448

Query: 340 RVFDFISDKKI----ALWNAMI 357
             FDFI         A+W +++
Sbjct: 449 EAFDFIKKMPFVPTAAIWGSLL 470


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/699 (37%), Positives = 396/699 (56%), Gaps = 57/699 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N ++++Y+KLG +   + +F     RD VSWN  +S  +      +AV   + M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 276 L-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY----- 329
               +  + ++ +++L  CS    +D G++I+   L+     D  FVGS LVDMY     
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSD-VFVGSPLVDMYTKLGL 188

Query: 330 ------------------CN--------CREVECGRRVFDFISDKKIALWNAMITGYGQN 363
                             CN        C  +E  +R+F  + ++    W  MITG  QN
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
             + EAL +F +M  +AG   +  T  SV+ AC    A  + + IH + I+     + +V
Sbjct: 249 GLEREALDMFREMR-LAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL+DMYS+   I+ ++T+F  M  ++ +SW  M+ GY   G   +A+ +  EMQ    
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ---- 363

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
              RN V          +P+  TL +V+  C  L++L +G + H  A+ + L + + V +
Sbjct: 364 ---RNGV----------EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 410

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           AL+ +Y KCG    + R+F  M +R+ ++W  ++  Y   G+  E + L + M+A G   
Sbjct: 411 ALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG--- 467

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             +KP+ VTFI + +ACS +G+V +G+  F  M  ++GI P  DH  C++DLLGRAG++E
Sbjct: 468 --LKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLE 525

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A   IN MP   D  G W++LL +CR+H ++EIG+ AA +L  LEP   + YVLLS++Y
Sbjct: 526 EARNFINNMPCHPDVVG-WATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLY 584

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           +S   WDK   +R+ M++  VRKEPG SWI++  ++H F A D S     Q++  LE L+
Sbjct: 585 ASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLN 644

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
            +M +EGYVPD S VLH+V E EK  +L  HSEKLAIAFG++  PPG  IRV KNLRVC 
Sbjct: 645 YKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCG 704

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH ATKFISKI  REI++RD  RFH FK+GTCSCGD+W
Sbjct: 705 DCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 259/547 (47%), Gaps = 63/547 (11%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           QP+ F    ++ A   + +L+    +  H+ +      ++   NT++++Y K G  +  +
Sbjct: 37  QPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ-----PNLFSWNTILSVYSKLGL-LSQM 90

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSN 192
            ++F+ +  +D VSWN  I+    +G    A+  +++ML  + +  +  T  ++ + CS 
Sbjct: 91  QQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSK 150

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT------------- 238
               D   LGRQ++G  L+ G   + F+ + L+ MY KLG + DAK              
Sbjct: 151 FRCVD---LGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMC 207

Query: 239 ------------------LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
                             LF   ++RD +SW  +++ L QN    EA+   R+M L G  
Sbjct: 208 NTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFA 267

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D  +  SVL AC  L  L  GK+IHAY +R D   DN FVGSALVDMY  CR ++    
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD-HKDNVFVGSALVDMYSKCRSIKSAET 326

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF  +  K +  W AM+ GYGQN + EEA+ +F +M+   G+ P+  T+ SV+ +C    
Sbjct: 327 VFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR-NGVEPDDFTLGSVISSCANLA 385

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +  +    H  A+  GL     V NAL+ +Y + G  E S  +F +M +RD VSW  ++ 
Sbjct: 386 SLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLA 445

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY   G+  + + L   M            + L       KP+ +T + VL  C     +
Sbjct: 446 GYAQFGKANETIGLFERML----------AHGL-------KPDGVTFIGVLSACSRAGLV 488

Query: 521 AKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
            KG +     I+      +V   + ++D+  + G L  AR   + MP   +V+ W  ++ 
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548

Query: 579 AYGMHGE 585
           +  +HG+
Sbjct: 549 SCRVHGD 555



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 222/462 (48%), Gaps = 30/462 (6%)

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G   +A+ + + I   N F  + ++ +Y     +   +++F+ +  +    WN  I+GY 
Sbjct: 54  GNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYA 113

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
                 +A+ ++  M + A +  N  T S+++  C +         I+G  +K G G D 
Sbjct: 114 NYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDV 173

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA---------- 471
           +V + L+DMY+++G I  +K  FD+M  R+ V  NTMITG   CG   ++          
Sbjct: 174 FVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKER 233

Query: 472 ------LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
                 +M+   MQN  E +  +   ++         +  T  +VL  CG+L AL +GK+
Sbjct: 234 DSISWTIMITGLMQNGLEREALDMFREMRLAGF--AMDQFTFGSVLTACGSLLALGEGKQ 291

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IHAY IR     +V VGSALVDMY+KC  +  A  VF  MP +NVI+W  +++ YG +G 
Sbjct: 292 IHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGF 351

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E +++   M   G     V+P++ T  ++ ++C++   + EG   F+      G+   
Sbjct: 352 SEEAVKIFFEMQRNG-----VEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISF 405

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQ-NVEIGEIAAQ 703
                 ++ L G+ G  E++++L   M        +W++LL G  +  + N  IG     
Sbjct: 406 ITVSNALITLYGKCGSTENSHRLFTEM--NIRDEVSWTALLAGYAQFGKANETIGLFERM 463

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM-KEMGV 744
               L+PD  +   +LS   S A L +K +   + M KE G+
Sbjct: 464 LAHGLKPDGVTFIGVLSAC-SRAGLVEKGLQYFESMIKEHGI 504



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 139/268 (51%), Gaps = 6/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   SW   +    ++   REA+  + EM  +    D F F +VL A   +  L  
Sbjct: 229 GLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGE 288

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GKQIHA+V++  +   +V V + LV+MY KC S +     VF R+ +K+ +SW +M+   
Sbjct: 289 GKQIHAYVIRTDHK-DNVFVGSALVDMYSKCRS-IKSAETVFKRMPQKNVISWTAMLVGY 346

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G  + A++ F  M  + VEP  FTL SV  +C+NL+    L  G Q H  +L  G  
Sbjct: 347 GQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLA---SLEEGAQFHCRALVSGLI 403

Query: 216 NTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +   + NAL+ +Y K G  +++  LF     RD VSW  +++  +Q  K  E +    +M
Sbjct: 404 SFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERM 463

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
              G+KPDGV+   VL ACS   +++ G
Sbjct: 464 LAHGLKPDGVTFIGVLSACSRAGLVEKG 491



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 45/268 (16%)

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C       + K++H   ++ +   +  + + L+  Y K G L +A  VFD +P  
Sbjct: 10  SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69

Query: 569 NVITWNVIIMAY---GMHGEGQEVLELLK-------NMVAEGS----------------- 601
           N+ +WN I+  Y   G+  + Q++  L+        N+   G                  
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIE---PSPDHYACVVDLLG 657
           +   +  N +TF  +   CS    V  G  +  + +K  +G +    SP     +VD+  
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP-----LVDMYT 184

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASH 715
           + G + DA +  + M PE +     + + G  R     E     +Q LF  L E D  S 
Sbjct: 185 KLGLIYDAKRYFDEM-PERNVVMCNTMITGLMRCGMIEE-----SQRLFCGLKERDSISW 238

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
            ++++ +  +  L  +A+D+ ++M+  G
Sbjct: 239 TIMITGLMQNG-LEREALDMFREMRLAG 265


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/698 (37%), Positives = 395/698 (56%), Gaps = 55/698 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L++ Y+KLG + D + +F S  + D+VSWN+++S  + N    E+V     M 
Sbjct: 70  NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             G +  + ++ +++L   S+   +D G++IH    +        FVGS LVDMY     
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQ-SYLFVGSPLVDMYAKTGF 188

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE---------VAGLWPN 385
           +    R+F+ I +K I ++N MITG  +  +  EA  LF  M E         + GL  N
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248

Query: 386 AT---------------------TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
                                  T  SV+ AC    A  + + IH + I+     + +V 
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           +AL+DMY +   ++ ++ +F  M  ++ +SW  M+ GY   G   +A+ +  +MQ     
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQ----- 363

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
             RN ++          P+  TL +V+  C  L++L +G + H  A+ + L   V V +A
Sbjct: 364 --RNEIH----------PDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNA 411

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+ +Y KCG L  A ++F  M +R+ ++W  ++  Y   G+  E + L + M+A G    
Sbjct: 412 LITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG---- 467

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
            + P+ VTF+ + +ACS +G+V +G   F  M  ++ I P PDHY C++DLL RAG++E+
Sbjct: 468 -IVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEE 526

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A   IN MP   D  G W++LL +CR++ N+EIG+ AA++L  LEP   + Y+LLS+IY+
Sbjct: 527 AKNFINQMPFSPDAIG-WATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYA 585

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           +   WD    +RK M+EMGV+KEPG SWI++ +++H F A D S   S+Q++  LE+L  
Sbjct: 586 AKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYL 645

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           +M +EGYVPD S VLH+V + EK  +L  HSEKLAIAFG+L  P G  IRV KNLRVC D
Sbjct: 646 KMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGD 705

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH ATK+IS+I  REI++RD  RFH FK+G CSCGD+W
Sbjct: 706 CHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 266/555 (47%), Gaps = 63/555 (11%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           +  + R+   P+ F +  ++     + DL   + +  H+ +      ++   NTL++ Y 
Sbjct: 28  HCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ-----PNLFSWNTLLSAYS 82

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTL 183
           K G  + D+ +VFD +   D VSWNS+++     G    ++  + MML   +V  +  T 
Sbjct: 83  KLGY-LQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA------ 236
            ++ +  SN   R  + LGRQ+HG   + G +   F+ + L+ MYAK G ++DA      
Sbjct: 142 STMLILSSN---RGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198

Query: 237 -------------------------KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
                                    + LF +  ++D +SW TI++ L+QN  F EAV   
Sbjct: 199 IPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF 258

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           ++M + G   D  +  SVL AC     LD GK+IHAY +R D   DN FVGSAL+DMYC 
Sbjct: 259 KEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQ-DNIFVGSALLDMYCK 317

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           CR V+    VF  +  K +  W AM+ GYGQN Y EEA+ +F  M+    + P+  T+ S
Sbjct: 318 CRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQR-NEIHPDDFTLGS 376

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ +C    +  +    HG A+  GL     V NAL+ +Y + G +E +  +F +M++RD
Sbjct: 377 VISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRD 436

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSW  +++GY   G+  + + L   M              L   ++   P+ +T + VL
Sbjct: 437 EVSWTALVSGYAQFGKANETISLFETM--------------LAHGIV---PDGVTFVGVL 479

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-N 569
             C     + KG       ++    T +    + ++D+ ++ G L  A+   + MP   +
Sbjct: 480 SACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPD 539

Query: 570 VITWNVIIMAYGMHG 584
            I W  ++ +  ++G
Sbjct: 540 AIGWATLLSSCRLNG 554



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  F+EA+  + EM       D F F +VL A  G   L  GKQIHA++
Sbjct: 237 SWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYI 296

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y   ++ V + L++MY KC +  +    VF ++  K+ +SW +M+    + G  + 
Sbjct: 297 IRTDYQ-DNIFVGSALLDMYCKCRNVKY-AEAVFRKMRHKNVISWTAMLVGYGQNGYSEE 354

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           A+  F  M  + + P  FTL SV  +C+NL+    L  G Q HG +L  G      + NA
Sbjct: 355 AVRIFCDMQRNEIHPDDFTLGSVISSCANLA---SLEEGAQFHGQALASGLICFVTVSNA 411

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++ A  LF   + RD VSW  +VS  +Q  K  E +     M   GI PD
Sbjct: 412 LITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPD 471

Query: 283 GVSIASVLPACSHLEMLDTG 302
           GV+   VL ACS   +++ G
Sbjct: 472 GVTFVGVLSACSRAGLVEKG 491



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 32/271 (11%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           ++ +  C  +      + +H   I+     + ++ N L++ Y ++G ++ ++ +FD +  
Sbjct: 9   TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNME-----------------EEKNRNNVYD 492
            +  SWNT+++ Y+  G   D   +   M N +                  E  R  VY+
Sbjct: 69  PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVR--VYN 126

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
           +         N IT  T+L        +  G++IH    +    + + VGS LVDMYAK 
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +N A R+F+ +P +N++ +N +I          E  +L  NM  + S         ++
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS---------IS 237

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           +  +    + +G+  E +D F +M    GIE
Sbjct: 238 WTTIITGLTQNGLFKEAVDKFKEM----GIE 264



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 58/296 (19%)

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
           A+ K++H   IR +   +  + + L++ Y K G L  AR VFD +P  N+ +WN ++ AY
Sbjct: 22  AQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAY 81

Query: 581 GMHGEGQEVLELLKNM--------------------VAEGSR-------GGEVKPNEVTF 613
              G  Q++  +  +M                    ++E  R        G V  N +TF
Sbjct: 82  SKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITF 141

Query: 614 IALFAACSHSGMVSEGM----DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
             +    S+ G V  G      +F      Y    SP     +VD+  + G + DA ++ 
Sbjct: 142 STMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSP-----LVDMYAKTGFINDANRIF 196

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQ 727
             + PE +     + + G  R    VE     A+ LF  + E D  S   +++ +  +  
Sbjct: 197 EEI-PEKNIVVYNTMITGLLRCRFIVE-----AEQLFDNMPEKDSISWTTIITGLTQNG- 249

Query: 728 LWDKAMDVRKKMKEMGVRKEPGC-SWIEFGDEIHK---FLAGDGSHQQSEQLHGFL 779
           L+ +A+D   K KEMG+  E  C     FG  +     FLA D    + +Q+H ++
Sbjct: 250 LFKEAVD---KFKEMGI--EGFCMDQFTFGSVLTACGGFLALD----EGKQIHAYI 296


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/722 (36%), Positives = 390/722 (54%), Gaps = 89/722 (12%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           M+AK GR+ DA+ +F    +RD VSW  +V  L++  +F EA+  L  M   G  P   +
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD-- 343
           + +VL +C+  +    G+++H++ ++   L     V +++++MY  C + E    VF+  
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 344 -----------------------------FISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                                         + D+ I  WNAMI GY QN  D +AL LF 
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M   + + P+  T++SV+ AC         + +H + ++  +  +  V NAL+  Y++ 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 435 GRIEISKTIFD-----------------------DMEV----------RDTVSWNTMITG 461
           G +E ++ I D                       DME           RD V+W  MI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G++ +A+ L R M                     P+PNS TL  VL  C +L+ L 
Sbjct: 300 YEQNGRNDEAIDLFRSM-----------------ITCGPEPNSYTLAAVLSVCASLACLD 342

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-VITWNVIIMAY 580
            GK+IH  AIR++L     V +A++ MYA+ G   +ARR+FD +  R   ITW  +I+A 
Sbjct: 343 YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 402

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG+G+E + L + M+  G     V+P+ +T++ + +ACSH+G V+EG   + ++K+++
Sbjct: 403 AQHGQGEEAVGLFEEMLRAG-----VEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEH 457

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            I P   HYAC+VDLL RAG   +A + I  MP E D A AW SLL ACR+H+N E+ E+
Sbjct: 458 QIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPD-AIAWGSLLSACRVHKNAELAEL 516

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ L  ++P+ +  Y  ++N+YS+   W  A  + K  KE  VRKE G SW     +IH
Sbjct: 517 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH 576

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F A D  H Q + ++     + E ++  G+VPD   VLH+V++E KE LL  HSEKLAI
Sbjct: 577 VFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAI 636

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG+++TP  TT+RV KNLRVCNDCH A K ISK+  REII+RD  RFHHF++G CSC D
Sbjct: 637 AFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKD 696

Query: 881 YW 882
           YW
Sbjct: 697 YW 698



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 86/512 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+ +F EAI + ++MT     P  F    VL + A  Q  ++G+++H+ V
Sbjct: 25  SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFV 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G G S V VAN+++NMYGKCG D      VF+R+  +   SWN+M++     G+ DL
Sbjct: 85  VKLGLG-SCVPVANSVLNMYGKCG-DSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDL 142

Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
           A   F                                RM+  S++ P  FT+ SV  AC+
Sbjct: 143 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 202

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD--------------- 235
           NL     +R+G+QVH   LR    +N+ + NAL++ YAK G V++               
Sbjct: 203 NLG---NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNV 259

Query: 236 ------------------AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                             A+ +F    +RD+V+W  ++    QN +  EA+   R M   
Sbjct: 260 ISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITC 319

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G +P+  ++A+VL  C+ L  LD GK+IH  A+R+ +L  +S V +A++ MY        
Sbjct: 320 GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQSSSVSNAIITMYARSGSFPW 378

Query: 338 GRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            RR+FD +  +K  + W +MI    Q+   EEA+ LF +M   AG+ P+  T   V+ AC
Sbjct: 379 ARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR-AGVEPDRITYVGVLSAC 437

Query: 397 VRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
             +  F ++   +   IK    +  +      ++D+ +R G    ++     M V  D +
Sbjct: 438 SHA-GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +W ++++    C  H +A     E+  +  EK
Sbjct: 497 AWGSLLSA---CRVHKNA-----ELAELAAEK 520



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 247/541 (45%), Gaps = 95/541 (17%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           M+ K G  + D   VF  + E+D VSW  M+  L R G++  A++    M      P+ F
Sbjct: 1   MFAKSGR-LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAK----------- 229
           TL +V  +C+         +GR+VH   +++G  +   + N+++ MY K           
Sbjct: 60  TLTNVLSSCAVT---QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 116

Query: 230 --------------------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV- 268
                               LGR+D A++LF+S  DR +VSWN +++  +QN    +A+ 
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           +F R +    + PD  +I SVL AC++L  +  GK++HAY LR ++   NS V +AL+  
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY-NSQVTNALIST 235

Query: 329 YCNCREVECGRRVFD---------------------------------FISDKKIALWNA 355
           Y     VE  RR+ D                                  ++++ +  W A
Sbjct: 236 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 295

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MI GY QN  ++EA+ LF  M    G  PN+ T+++V+  C         + IH  AI+ 
Sbjct: 296 MIVGYEQNGRNDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 354

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALML 474
            L +   V NA++ MY+R G    ++ +FD +  R +T++W +MI      GQ  +A+ L
Sbjct: 355 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 414

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN- 533
             EM     E                 P+ IT + VL  C     + +GK  +   I+N 
Sbjct: 415 FEEMLRAGVE-----------------PDRITYVGVLSACSHAGFVNEGKRYYD-QIKNE 456

Query: 534 -MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE 591
             +A ++   + +VD+ A+ G  + A+     MPV  + I W  ++ A  +H +  E+ E
Sbjct: 457 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH-KNAELAE 515

Query: 592 L 592
           L
Sbjct: 516 L 516


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/718 (36%), Positives = 400/718 (55%), Gaps = 62/718 (8%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED------RDLVSWNTIVS 256
           +Q+H   ++ G  NT  + + +  +  +    D       FE+       ++  WN+++ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             S +   L ++    +M   G++P+  +   +  +C+  +    GK++HA+AL+  +  
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 317 DNSFVGSALVDMYCNCREVE----------------------------C---GRRVFDFI 345
            N  V ++++ MY +  E++                            C    RR+FD I
Sbjct: 165 -NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEI 223

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             K +  WNAMI+GY Q+   EEA++ F +M+E A + PN +TM  V+ AC  + +    
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE-ANVLPNKSTMVVVLSACGHTRSGELG 282

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + I       G G +  + NAL+DMY + G  +I++ +FD +E +D +SWNTMI GY+  
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
             + +AL L   M        R+NV          KPN +T + +L  C  L AL  GK 
Sbjct: 343 SLYEEALALFEVML-------RSNV----------KPNDVTFLGILHACACLGALDLGKW 385

Query: 526 IHAYAIRNML-ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +HAY  +N+  +++  + ++L+DMYAKCGC+  A RVF  M  RN+ +WN ++  + MHG
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             +  L L   MV +G      +P+++TF+ + +AC+ +G+V  G   F  M  DYGI P
Sbjct: 446 HAERALALFSEMVNKGL----FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
              HY C++DLL RA K E+A  L+  M  E D A  W SLL AC+ H  VE GE  A+ 
Sbjct: 502 KLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGA-IWGSLLSACKAHGRVEFGEYVAER 560

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           LF LEP+ A  +VLLSNIY+ A  WD    +R ++ + G++K PGC+ IE   ++H+FL 
Sbjct: 561 LFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLV 620

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
           GD  H +   ++  L  + + + + G+VP+TS VL++++EE KE  L  HSEKLAI+FG+
Sbjct: 621 GDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGL 680

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + T PGTTIR+ KNLRVC +CH ATK ISKI +REII RD  RFHHFK+G CSC D W
Sbjct: 681 IKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 207/436 (47%), Gaps = 42/436 (9%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M    +QP++  FP + K+    +    GKQ+HAH +K     +   V  ++++MY   G
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNP-HVHTSVIHMYASVG 180

Query: 128 SDMW------------------------------DVYKVFDRITEKDQVSWNSMIATLCR 157
              +                              D  ++FD I  KD VSWN+MI+   +
Sbjct: 181 EMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQ 240

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN 216
            G+++ A+  F  M  +NV P+  T+V V  AC +  S   G  +G  V  N       N
Sbjct: 241 SGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGS---N 297

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + NAL+ MY K G  D A+ LF   E++D++SWNT++   S    + EA+     M  
Sbjct: 298 LQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLR 357

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KP+ V+   +L AC+ L  LD GK +HAY  +N     N+ + ++L+DMY  C  +E
Sbjct: 358 SNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIE 417

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              RVF  +  + +A WNAM++G+  + + E AL LF +M       P+  T   V+ AC
Sbjct: 418 AAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSAC 477

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
            ++    D    +  ++    G    +Q+   ++D+ +R  + E ++ +  +ME+  D  
Sbjct: 478 TQA-GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGA 536

Query: 454 SWNTMITGYTICGQHG 469
            W ++++    C  HG
Sbjct: 537 IWGSLLSA---CKAHG 549



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 12/266 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +S +F EAI+ + EM  +++ P+      VL A    +   LGK I + V
Sbjct: 230 SWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWV 289

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
              G+G S++ + N L++MY KCG    D+ + +FD I EKD +SWN+MI        ++
Sbjct: 290 RDNGFG-SNLQLTNALIDMYCKCGET--DIARELFDGIEEKDVISWNTMIGGYSYLSLYE 346

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG---NSLRVGEWNTFI 219
            AL  F +ML SNV+P+  T + +  AC+ L     L LG+ VH     +LR    N  +
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLG---ALDLGKWVHAYIDKNLRNSS-NASL 402

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             +L+ MYAK G ++ A+ +F+S   R+L SWN ++S  + +     A+    +M  +G+
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462

Query: 280 -KPDGVSIASVLPACSHLEMLDTGKE 304
            +PD ++   VL AC+   ++D G +
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQ 488



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 47/256 (18%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +  + + EA+  +  M RS+++P++  F  +L A A +  L LGK +HA++
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K     S+ ++  +L++MY KCG  +    +VF  +  ++  SWN+M++     G  + 
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGC-IEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449

Query: 164 ALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           AL  F  M+   +  P   T V V  AC+                               
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACT------------------------------- 478

Query: 223 LMAMYAKLGRVDDAKTLFKS-FEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                 + G VD     F+S  +D      L  +  ++  L++ +KF EA + ++ M + 
Sbjct: 479 ------QAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEM- 531

Query: 278 GIKPDGVSIASVLPAC 293
             +PDG    S+L AC
Sbjct: 532 --EPDGAIWGSLLSAC 545


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/594 (42%), Positives = 371/594 (62%), Gaps = 28/594 (4%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           V+ AC   ++LD GK+IH   L+     D  FV ++LV MY     V   R++FD +  +
Sbjct: 3   VVKACG--DLLD-GKKIHCLVLKLGFEWD-VFVAASLVHMYSRFGLVGDARKLFDDMPAR 58

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WNAMI+GY QN    EAL +  +M  + G+  +A T++SV+P C +       + I
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMR-LEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H + IK GL  + +V NAL++MY++ G +  ++ +F  + ++D VSWNT+ITGY   G  
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLA 176

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A+ +   M+  EE                  PN  T +++LP    + AL +G  IH 
Sbjct: 177 SEAIEVYLLMEEHEE----------------IIPNQGTWVSILPAYSHVGALQQGMRIHG 220

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
             I+N L +DV VG+ L+DMY KCG L+ A  +F  +P +N + WN +I  YG+HG+G++
Sbjct: 221 QVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEK 280

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            LEL + M AE      VKP+ +TF++L +ACSHSG+VS+    F  M+++YGI+PS  H
Sbjct: 281 ALELFREMKAE-----RVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKH 335

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           Y C+VDL GRAG++E A+  I  MP + D A AW +LL ACRIH N+E+G+ A++ LF +
Sbjct: 336 YGCMVDLFGRAGELEMAFNFIKKMPIQPD-ASAWGALLNACRIHGNIELGKHASERLFEV 394

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           + +   +YVLLSNIY++   W+   DVR   ++ G+RK PG S I   +++  F  G+ +
Sbjct: 395 DSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQT 454

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H + E+++  L +L+ +++  GYVPD   VL +V E+EKE +L GHSE+LAIA+GI++T 
Sbjct: 455 HPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTS 514

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P T IR+ KNLRVC DCH  TKFIS I  REII+RD  RFHHFK GTCSCGDYW
Sbjct: 515 PKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 223/453 (49%), Gaps = 39/453 (8%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G+++H   L++G EW+ F+  +L+ MY++ G V DA+ LF     RD  SWN ++S   Q
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N    EA+    +M L G+K D +++ASVLP C+ +  + +GK IH Y +++ +  +  F
Sbjct: 73  NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFE-LF 131

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V +AL++MY     +   ++VF  +  K +  WN +ITGY QN    EA+ +++ MEE  
Sbjct: 132 VSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHE 190

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PN  T  S++PA     A      IHG  IK  L  D +V   L+DMY + G+++ +
Sbjct: 191 EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDA 250

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
            ++F  +  +++V WN MI+ Y + G    AL L REM+                   R 
Sbjct: 251 ISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMK-----------------AERV 293

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGC 554
           KP+ IT +++L  C     ++      A    NM+  +  +  +L      VD++ + G 
Sbjct: 294 KPDHITFVSLLSACSHSGLVSD-----AQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGE 348

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           L  A      MP++ +   W  ++ A  +HG     +EL K+      R  EV    V +
Sbjct: 349 LEMAFNFIKKMPIQPDASAWGALLNACRIHGN----IELGKH---ASERLFEVDSENVGY 401

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
             L +    +    EG+D    +  D G+  +P
Sbjct: 402 YVLLSNIYANVGKWEGVDDVRSLARDRGLRKNP 434



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 203/400 (50%), Gaps = 30/400 (7%)

Query: 81  PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI 140
           P V+KA   + D   GK+IH  V+K G+    V VA +LV+MY + G  + D  K+FD +
Sbjct: 1   PPVVKACGDLLD---GKKIHCLVLKLGFEWD-VFVAASLVHMYSRFGL-VGDARKLFDDM 55

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
             +D+ SWN+MI+  C+ G    AL+    M    V+  + T+ SV   C+ +     + 
Sbjct: 56  PARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGD---IL 112

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
            G+ +H   ++ G E+  F+ NAL+ MYAK G +  A+ +F     +D+VSWNT+++  +
Sbjct: 113 SGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYA 171

Query: 260 QNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           QN    EA+ ++L       I P+  +  S+LPA SH+  L  G  IH   ++N  L  +
Sbjct: 172 QNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN-CLYSD 230

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF--IKM 376
            FVG+ L+DMY  C +++    +F  +  K    WNAMI+ YG +   E+AL LF  +K 
Sbjct: 231 VFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKA 290

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG-----HAIKLGLGRDRYVQNALMDMY 431
           E V    P+  T  S++ AC  S    D +         + IK  L         ++D++
Sbjct: 291 ERVK---PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKH----YGCMVDLF 343

Query: 432 SRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
            R G +E++      M ++ D  +W  ++     C  HG+
Sbjct: 344 GRAGELEMAFNFIKKMPIQPDASAWGALLNA---CRIHGN 380



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 8/259 (3%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
            R + SW   +    ++    EA+    EM    ++ D     +VL   A + D+  GK 
Sbjct: 57  ARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKL 116

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IH +V+K+G     + V+N L+NMY K GS +    KVF  +  KD VSWN++I    + 
Sbjct: 117 IHLYVIKHGLEF-ELFVSNALINMYAKFGS-LGHAQKVFGLLI-KDVVSWNTLITGYAQN 173

Query: 159 GKWDLALEAFRMM-LYSNVEPSSFTLVSVALACSNL-SRRDGLRLGRQVHGNSLRVGEWN 216
           G    A+E + +M  +  + P+  T VS+  A S++ + + G+R+  QV  N L     +
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYS---D 230

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+   L+ MY K G++DDA +LF     ++ V WN ++S    +    +A+   R+M  
Sbjct: 231 VFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKA 290

Query: 277 RGIKPDGVSIASVLPACSH 295
             +KPD ++  S+L ACSH
Sbjct: 291 ERVKPDHITFVSLLSACSH 309


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/601 (40%), Positives = 367/601 (61%), Gaps = 36/601 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++L  C+HL  L+ GK IHA  L    R+D+++ N+     L+++Y  C ++   R++FD
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNT-----LLNLYAKCGDLVYARKLFD 74

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC--VRSEA 401
            +S + +  W A+ITGY Q++  ++AL+L  +M  + GL PN  T++S++ A   V S  
Sbjct: 75  EMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRI-GLKPNQFTLASLLKAASGVGSTD 133

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 +HG  ++ G   + YV  A++DMY+R   +E ++ IFD M  ++ VSWN +I G
Sbjct: 134 VLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAG 193

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   GQ   A  L   M        R NV          KP   T  +VL  C ++ +L 
Sbjct: 194 YARKGQGDKAFCLFSNML-------RENV----------KPTHFTYSSVLCACASMGSLE 236

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +GK +HA  I+        VG+ L+DMYAK G +  A++VFD +  R+V++WN ++  Y 
Sbjct: 237 QGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYS 296

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G+  L+  + M+        + PN++TF+ +  ACSH+G++ EG   F  MK  Y 
Sbjct: 297 QHGLGKVALQRFEEMLRT-----RIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YN 350

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           +EP   HY  +VDLLGRAG ++ A Q I+ MP +   A  W +LLGACR+H+N+E+G  A
Sbjct: 351 VEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIK-PTAAVWGALLGACRMHKNMELGGYA 409

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ +F L+      +VLL NIY+ A  W+ A  VRK MKE GV+KEP CSW+E  +E+H 
Sbjct: 410 AECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHV 469

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+A D +H Q  ++H   E +S+++++ GYVPD+S VL  ++++E+E  L  HSEKLA+A
Sbjct: 470 FVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALA 529

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           F +LNTPPG+TIR+ KN+R+C DCH A KF+SK+  REII+RD  RFHHF +G CSC DY
Sbjct: 530 FALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDY 589

Query: 882 W 882
           W
Sbjct: 590 W 590



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 195/398 (48%), Gaps = 26/398 (6%)

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C++L++   L  G+ +H   L     +  +M N L+ +YAK G +  A+ LF     RD+
Sbjct: 25  CTHLNK---LNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT--GKEIH 306
           V+W  +++  SQ+D+  +A++ L +M   G+KP+  ++AS+L A S +   D   G+++H
Sbjct: 82  VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
              LR      N +V  A++DMY  C  +E  + +FD +  K    WNA+I GY +    
Sbjct: 142 GLCLRYG-YDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           ++A  LF  M     + P   T SSV+ AC    +    + +H   IK G     +V N 
Sbjct: 201 DKAFCLFSNMLR-ENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L+DMY++ G IE +K +FD +  RD VSWN+M+TGY+   QHG   + L+  + M     
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYS---QHGLGKVALQRFEEMLRT-- 314

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                       R  PN IT + VL  C     L +G+       +  +   +     +V
Sbjct: 315 ------------RIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMV 362

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           D+  + G L+ A +    MP++     W  ++ A  MH
Sbjct: 363 DLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 201/382 (52%), Gaps = 13/382 (3%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +LK    +  L+ GK IHA ++   +    + + NTL+N+Y KCG D+    K+FD ++ 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFR-DDLVMQNTLLNLYAKCG-DLVYARKLFDEMSS 78

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           +D V+W ++I    +  +   AL     ML   ++P+ FTL S+  A S +   D L+ G
Sbjct: 79  RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-G 137

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQ+HG  LR G + N ++  A++ MYA+   +++A+ +F     ++ VSWN +++  ++ 
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR-NDILIDNSF 320
            +  +A      M    +KP   + +SVL AC+ +  L+ GK +HA  ++  + L+  +F
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV--AF 255

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VG+ L+DMY     +E  ++VFD ++ + +  WN+M+TGY Q+   + AL  F +M    
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIE 438
            + PN  T   V+ AC  S A    EG H   +      +  + +   ++D+  R G ++
Sbjct: 316 -IAPNDITFLCVLTAC--SHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLD 372

Query: 439 ISKTIFDDMEVRDTVS-WNTMI 459
            +     +M ++ T + W  ++
Sbjct: 373 RAIQFISEMPIKPTAAVWGALL 394



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 174/322 (54%), Gaps = 18/322 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI--QDLSLGKQIHA 101
           +W   +   ++ ++ ++A+L   EM R  ++P+ F   ++LKA +G+   D+  G+Q+H 
Sbjct: 83  TWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHG 142

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
             ++YGY  S+V V+  +++MY +C   + +   +FD +  K++VSWN++IA   R G+ 
Sbjct: 143 LCLRYGYD-SNVYVSCAILDMYARC-HHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIM 220
           D A   F  ML  NV+P+ FT  SV  AC+++     L  G+ VH   ++ GE    F+ 
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMG---SLEQGKWVHALMIKWGEKLVAFVG 257

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ MYAK G ++DAK +F     RD+VSWN++++  SQ+     A+    +M    I 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS-ALVDMYCNCREVECGR 339
           P+ ++   VL ACSH  +LD G+  H + +     ++        +VD+      ++   
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLD--- 372

Query: 340 RVFDFISDKKI----ALWNAMI 357
           R   FIS+  I    A+W A++
Sbjct: 373 RAIQFISEMPIKPTAAVWGALL 394


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/736 (35%), Positives = 421/736 (57%), Gaps = 33/736 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M    + PD + FP V+K   G+ ++ LGK I   +++ G+ L  + VA++L+ +Y   G
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLD-MFVASSLIKLYADNG 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV- 186
             + D  + FD++ +KD V WN MI    + G+ D A++ F+ M+ S  +P S T   V 
Sbjct: 60  C-IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVL 118

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           +++CS       +  GRQ+HG  +R G ++   + N L+ +Y+K  ++ DA+ LF     
Sbjct: 119 SISCSEAM----VEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQ 174

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            DLV WN ++    QN    +A M   +M   GIKPD ++  S LP+ +    L   KEI
Sbjct: 175 IDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEI 234

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H Y +R+ +++D  ++ SAL+D+Y  CR+     ++F+  +   I ++ AMI+GY  N  
Sbjct: 235 HGYIVRHGVILD-VYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGM 293

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           +++AL +F  + +   + PNA T SS++PAC    A      +HG+ IK  L     V +
Sbjct: 294 NKDALEIFRWLLQ-KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGS 352

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           A+M+MY++ GR++++  IF  + ++D + WN++IT ++  G+  +A+ L R+M  ME  K
Sbjct: 353 AIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQM-GMEGVK 411

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                YD            +T+   L  C  + AL  GKEIH + I+    +D+   SAL
Sbjct: 412 -----YD-----------CVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           ++MYAKCG LN AR VF+LM  +N + WN II AYG HG   + L L  NM+ EG     
Sbjct: 456 INMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG----- 510

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           ++P+ +TF+ + ++C H+G V +G+  F  M ++YGI    +HYAC+ DL GRAG +++A
Sbjct: 511 IQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEA 570

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
           +++I  MP     A  W +LLGACR+H NVE+ E+A++ L  LEP  + +Y+LL+++ + 
Sbjct: 571 FEVITSMPFP-PAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLAD 629

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
           A  W     ++  MKE GV+K PGCSWIE  +    F A DGSH +S Q++  L++L   
Sbjct: 630 AGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLE 689

Query: 786 MRKEGYVPDTSCVLHN 801
           +RK GYVP       N
Sbjct: 690 LRKVGYVPQAVACFGN 705



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 264/543 (48%), Gaps = 27/543 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    +  +   AI  + +M  S+ +PD+  F  VL        +  G+Q+H  VV
Sbjct: 79  WNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G     + V NTLV +Y K G  + D  K+FD + + D V WN MI    + G  D A
Sbjct: 139 RSGLDFVPL-VGNTLVTVYSK-GRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDA 196

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNAL 223
              F  M+ + ++P S T  S      +L+    L+  +++HG  +R G   + ++ +AL
Sbjct: 197 SMLFNEMISAGIKPDSITFTSFL---PSLAESSSLKQIKEIHGYIVRHGVILDVYLNSAL 253

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + +Y K      A  +F      D+V +  ++S    N    +A+   R +  + + P+ 
Sbjct: 254 IDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNA 313

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++ +S+LPAC+ L  +  G+E+H Y ++N+ L +   VGSA+++MY  C  ++    +F 
Sbjct: 314 LTFSSILPACAGLAAIKLGRELHGYIIKNE-LEEKCPVGSAIMNMYAKCGRLDLAHLIFG 372

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            IS K    WN++IT + Q+   EEA+ LF +M  + G+  +  T+S+ + AC    A  
Sbjct: 373 RISIKDAICWNSIITSFSQDGKPEEAIYLFRQM-GMEGVKYDCVTVSAALSACANIPALH 431

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHG  IK     D +  +AL++MY++ G++ I++ +F+ M+ ++ V+WN++I  Y 
Sbjct: 432 YGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYG 491

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G   D+L L   M              L+E +   +P+ IT +T+L  CG    +  G
Sbjct: 492 YHGYLADSLALFHNM--------------LEEGI---QPDHITFLTILSSCGHAGQVEDG 534

Query: 524 -KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVIIMAYG 581
            +          +   +   + + D++ + G L+ A  V   MP     + W  ++ A  
Sbjct: 535 VRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACR 594

Query: 582 MHG 584
           +HG
Sbjct: 595 VHG 597



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 221/429 (51%), Gaps = 13/429 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    ++    +A + + EM  + I+PD+  F + L ++A    L   K+IH ++V
Sbjct: 180 WNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           ++G  L  V + + L+++Y KC  D     K+F+  T+ D V + +MI+     G    A
Sbjct: 240 RHGVIL-DVYLNSALIDLYFKC-RDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDA 297

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           LE FR +L   + P++ T  S+  AC+ L+    ++LGR++HG  ++   E    + +A+
Sbjct: 298 LEIFRWLLQKKMIPNALTFSSILPACAGLA---AIKLGRELHGYIIKNELEEKCPVGSAI 354

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           M MYAK GR+D A  +F     +D + WN+I++S SQ+ K  EA+   RQM + G+K D 
Sbjct: 355 MNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDC 414

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++++ L AC+++  L  GKEIH + ++     D  F  SAL++MY  C ++   R VF+
Sbjct: 415 VTVSAALSACANIPALHYGKEIHGFMIKGAFESD-LFDMSALINMYAKCGKLNIARLVFN 473

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + +K    WN++I  YG + Y  ++L LF  M E  G+ P+  T  +++ +C  +    
Sbjct: 474 LMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLE-EGIQPDHITFLTILSSCGHAGQVE 532

Query: 404 DK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           D          + G+         + D++ R G ++ +  +   M      S W T++  
Sbjct: 533 DGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGA 592

Query: 462 YTICGQHGD 470
              C  HG+
Sbjct: 593 ---CRVHGN 598


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/748 (36%), Positives = 398/748 (53%), Gaps = 82/748 (10%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD + E+D VSWN MI    R      A E F +M   +V        S     S  +
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV-------CSWNTMLSGYA 168

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           +   +   R V     R+ E N    NAL++ Y +  ++++A  LFKS E+  LVSWN +
Sbjct: 169 QNGCVDDARSVFD---RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL 225

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    +  K +EA  F   M +R    D VS  +++   +      +GK   A  L ++ 
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQ-----SGKIDEARQLFDES 276

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            + + F  +A+V  Y   R VE  R +FD + ++    WNAM+ GY Q E  E A  LF 
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF- 335

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
                            V+P                        R+    N ++  Y++ 
Sbjct: 336 ----------------DVMPC-----------------------RNVSTWNTMITGYAQC 356

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G+I  +K +FD M  RD VSW  MI GY+  G   +AL L  +M+      NR+      
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS------ 410

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                      +  + L  C  + AL  GK++H   ++    T   VG+AL+ MY KCG 
Sbjct: 411 -----------SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A  +F  M  +++++WN +I  Y  HG G+  L   ++M  EG     +KP++ T +
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-----LKPDDATMV 514

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A+ +ACSH+G+V +G   FY M  DYG+ P+  HYAC+VDLLGRAG +EDA+ L+  MP 
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E D A  W +LLGA R+H N E+ E AA  +F +EP+ +  YVLLSN+Y+S+  W     
Sbjct: 575 EPD-AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 633

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R +M++ GV+K PG SWIE  ++ H F  GD  H + +++  FLE L  RM+K GYV  
Sbjct: 634 LRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSK 693

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           TS VLH+V EEEKE ++  HSE+LA+A+GI+    G  IRV KNLRVC DCH A K++++
Sbjct: 694 TSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAR 753

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I  R IILRD  RFHHFK+G+CSCGDYW
Sbjct: 754 ITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 213/517 (41%), Gaps = 70/517 (13%)

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           + EWN  I     + Y + GR ++A  +FK       VS+N ++S   +N +F  A    
Sbjct: 64  IKEWNVAI-----SSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M  R    D VS   ++        L   +E+       D+   N+ +       Y  
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQ 169

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              V+  R VFD + +K    WNA+++ Y QN   EEA MLF   E  A +  N      
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229

Query: 392 V-VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           V     V +  F D   +          RD    N ++  Y++ G+I+ ++ +FD+  V+
Sbjct: 230 VKKKKIVEARQFFDSMNV----------RDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D  +W  M++GY               +QN   E+ R  ++D       P+ N ++   +
Sbjct: 280 DVFTWTAMVSGY---------------IQNRMVEEAR-ELFD-----KMPERNEVSWNAM 318

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L G      +   KE+       M   +V   + ++  YA+CG ++ A+ +FD MP R+ 
Sbjct: 319 LAGYVQGERMEMAKELFDV----MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++W  +I  Y   G   E L L   M  EG R      N  +F +  + C+    +  G 
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGR-----LNRSSFSSALSTCADVVALELGK 429

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            L  ++    G E        ++ +  + G +E+A  L   M  +     +W++++    
Sbjct: 430 QLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK--DIVSWNTMIAGYS 486

Query: 691 IHQNVEIGEIAAQNLFL-------LEPDVASHYVLLS 720
            H     GE+A +  F        L+PD A+   +LS
Sbjct: 487 RHG---FGEVALR--FFESMKREGLKPDDATMVAVLS 518



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 8/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S    EA+  +++M R   + +  +F + L   A +  L LGKQ+H  +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK GY  +   V N L+ MY KCGS + +   +F  +  KD VSWN+MIA   R G  ++
Sbjct: 436 VKGGYE-TGCFVGNALLLMYCKCGS-IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ-VHGNSLRVGEW-NTFIMN 221
           AL  F  M    ++P   T+V+V  ACS+    D    GRQ  +  +   G   N+    
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK---GRQYFYTMTQDYGVMPNSQHYA 550

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
            ++ +  + G ++DA  L K+   + D   W T++ +
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 280/854 (32%), Positives = 464/854 (54%), Gaps = 45/854 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   L   A+  +  EA   +  MT  ++     ++ A++       DL   +++   +
Sbjct: 235  TWTILLTGYAKEGRIEEAREVFESMTERNV----VSWNAMISGYVQNGDLKNARKLFDEM 290

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +      +V   N++V  Y  C   M +  ++FD++ E++ VSW  MI+       +  
Sbjct: 291  PE-----KNVASWNSVVTGYCHC-YRMSEARELFDQMPERNSVSWMVMISGYVHISDYWE 344

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            A + F  M  +   P     V V  A + L   D L L   +   +++ G E +  + +A
Sbjct: 345  AWDVFVKMCRTVARPDQSIFVVVLSAITGL---DDLELIGSLRPIAIKTGYEGDVVVGSA 401

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            ++  Y + G +D A   F++  +R+  SW T++++ +Q  +  +A+    ++  + +   
Sbjct: 402  ILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV--- 458

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
              +  +++ A + +     G+   A  + ++IL  N    +A++  Y     ++  + +F
Sbjct: 459  -ATKTAMMTAYAQV-----GRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLF 512

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              +  K  A W AMI G+ QNE   EAL L I++   +G  P+ ++ +S + AC      
Sbjct: 513  QKMPVKNSASWAAMIAGFVQNEESREALELLIELHR-SGSVPSDSSFTSALSACANIGDV 571

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 IH  AIK G   + YV N L+ MY++ G +E    +F  + V+DTVSWN++I+G 
Sbjct: 572  EIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGL 631

Query: 463  TICGQHGDALMLLREMQNME------------EEKNRNNVYDL--DETVLRPKPNSITLM 508
            +      DA ++  +M   +            +  +     DL  D      KPN +T+ 
Sbjct: 632  SENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVT 691

Query: 509  TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
            ++L  CG L A+  G++ HA   +    T + VG++L+ MY KCG  +    VF+ MP  
Sbjct: 692  SLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEH 750

Query: 569  NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
            ++ITWN +++    +G G+E +++ + M  EG     + P++++F+ +  ACSH+G+V E
Sbjct: 751  DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG-----ILPDQMSFLGVLCACSHAGLVDE 805

Query: 629  GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            G   F  M   YGI P   HY C+VDLLGRAG + +A  LI  MP + D    W +LLGA
Sbjct: 806  GWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSV-IWEALLGA 864

Query: 689  CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
            CRIH+NVE+G+  A+ LF +    ++ YVLLSN+++S  +WDK  ++RK MK+ G+ KEP
Sbjct: 865  CRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEP 924

Query: 749  GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
            G SWI+  +++H F+ GD +H Q E+++  L+      R  GY+PDT+ VLH+V EE+K+
Sbjct: 925  GISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQ 984

Query: 809  TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
              L  HSEKLA+ FGIL+TP G+ I++ KNLR+C DCH   KF+SK+  R+II+RD  RF
Sbjct: 985  NELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRF 1044

Query: 869  HHFKNGTCSCGDYW 882
            HHF++G+CSCGDYW
Sbjct: 1045 HHFRDGSCSCGDYW 1058



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 149/651 (22%), Positives = 265/651 (40%), Gaps = 141/651 (21%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT +   G+ G  + +  +VF+ + ++D VSWNSMI    + GK D A   F   +  N+
Sbjct: 175 NTRIQELGRLGR-VEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
              +  L   A       +   +   R+V  +   + E N    NA+++ Y + G + +A
Sbjct: 234 RTWTILLTGYA-------KEGRIEEAREVFES---MTERNVVSWNAMISGYVQNGDLKNA 283

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG------------------ 278
           + LF    ++++ SWN++V+      +  EA     QM  R                   
Sbjct: 284 RKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYW 343

Query: 279 -------------IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
                         +PD      VL A + L+ L+    +   A++     D   VGSA+
Sbjct: 344 EAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGD-VVVGSAI 402

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           ++ Y     ++     F+ + ++    W  MI  + Q    ++A+ L+ ++       P 
Sbjct: 403 LNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV-------PE 455

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            T  +                                 + A+M  Y+++GRI+ ++ IFD
Sbjct: 456 QTVAT---------------------------------KTAMMTAYAQVGRIQKARLIFD 482

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRNN 489
           ++   + V+WN +I GYT  G   +A  L ++M                QN E  +    
Sbjct: 483 EILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
           + +L  +   P  +S T  + L  C  +  +  G+ IH+ AI+     +  V + L+ MY
Sbjct: 543 LIELHRSGSVPSDSSFT--SALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMY 600

Query: 550 AKCG-------------------------------CLNFARRVFDLMPVRNVITWNVIIM 578
           AKCG                                L+ AR VF+ MP R+V++W  II 
Sbjct: 601 AKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIIS 660

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           AY   G G+  L+L  +M+A G     +KPN++T  +L +AC + G +  G + F+ +  
Sbjct: 661 AYVQAGHGEVALDLFLDMLARG-----IKPNQLTVTSLLSACGNLGAIKLG-EQFHALIF 714

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             G +        ++ +  + G  ED + +   M PE D    W+++L  C
Sbjct: 715 KLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEM-PEHDLI-TWNAVLVGC 762



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 129/552 (23%), Positives = 236/552 (42%), Gaps = 63/552 (11%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F  N  +    +LGRV++A+ +F     RD+VSWN++++  SQN K  EA +       +
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGK 231

Query: 278 GIKPDGVSIA------------SVLPACSHLEMLDTGKEIHAYALRNDI-----LID--- 317
            I+   + +              V  + +   ++     I  Y    D+     L D   
Sbjct: 232 NIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP 291

Query: 318 --NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N    +++V  YC+C  +   R +FD + ++    W  MI+GY       EA  +F+K
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M       P+ +    V+ A    +       +   AIK G   D  V +A+++ Y+R G
Sbjct: 352 MCRTVAR-PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            ++++   F+ M  R+  SW TMI  +  CG+  DA+ L   +                 
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV----------------- 453

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
               P+    T   ++     +  + K + I       +L  +VV  +A++  Y + G L
Sbjct: 454 ----PEQTVATKTAMMTAYAQVGRIQKARLI----FDEILNPNVVAWNAIIAGYTQNGML 505

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A+ +F  MPV+N  +W  +I  +  + E +E LELL     E  R G V P++ +F +
Sbjct: 506 KEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELL----IELHRSGSV-PSDSSFTS 560

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
             +AC++ G V  G  + + +    G + +      ++ +  + G VED   +   +   
Sbjct: 561 ALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI--R 617

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAM 733
                +W+SL+    + +N  + +  A+ +F   P  DV S   ++S  Y  A   + A+
Sbjct: 618 VKDTVSWNSLISG--LSENYMLDD--ARVVFEKMPKRDVVSWTAIIS-AYVQAGHGEVAL 672

Query: 734 DVRKKMKEMGVR 745
           D+   M   G++
Sbjct: 673 DLFLDMLARGIK 684


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/701 (37%), Positives = 389/701 (55%), Gaps = 30/701 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALM--AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL- 258
           +Q+H   LR G + + F  + L+  A  +    +D A+ +F      +L +WNT++ +  
Sbjct: 52  KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S ++     ++FLR +      PD  +   ++ A S LE L TGK  H   ++  +L  +
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV-LLGSD 170

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F+ ++L+  Y  C E+  G RVF  I  + +  WN+MIT + Q    EEAL LF +ME 
Sbjct: 171 VFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME- 229

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
              + PN  TM  V+ AC +   F     +H +  +  +G    + NA++DMY++ G +E
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVE 289

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +K +FD M  +D VSW TM+ GY   G++  A  +   M N ++    N +    E   
Sbjct: 290 DAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPN-QDIAAWNALISAYEQCG 348

Query: 499 RPK----------------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
           +PK                P+ +TL++ L  C  L A+  G  IH Y  +  +  +  + 
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           ++L+DMY KCG L  A  VF  +  ++V  W+ +I    MHG G++ + L   M  +   
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQED--- 465

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
             +VKPN VTF  +  ACSH G+V EG   F +M+  YG+ P   HYAC+VD+LGRAG +
Sbjct: 466 --KVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLL 523

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           E+A +LI  MP     A  W +LLGAC IH+NV + E A   L  LEP     YVLLSNI
Sbjct: 524 EEAVELIEKMPMA-PAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNI 582

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A  WD+   +RK M+++G++KEPGCS IE    +H+FL GD SH  +++++  L+ +
Sbjct: 583 YAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEI 642

Query: 783 SERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
             R+   GYVP+ S +L  V EE+ KE  L  HSEKLAIAFG+++T     IR+ KNLRV
Sbjct: 643 VARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRV 702

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K +SK+  REI+LRD  RFHHF+ G CSC DYW
Sbjct: 703 CGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 245/505 (48%), Gaps = 65/505 (12%)

Query: 3   SSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAI 62
           S+++ +T     P  SL   Q        +P P   T     W   +R+ A S+   +++
Sbjct: 69  SASRLITAAALSPFPSLDYAQ---QVFDQIPHPNLYT-----WNTLIRAYASSSNPHQSL 120

Query: 63  LSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           L ++ M  +S   PD F FP ++KA + +++L  GK  H  V+K   G S V + N+L++
Sbjct: 121 LIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG-SDVFILNSLIH 179

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
            Y KCG ++   Y+VF  I  +D VSWNSMI    + G  + ALE F+ M   NV+P+  
Sbjct: 180 FYAKCG-ELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGI 238

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
           T+V V  AC   +++     GR VH      R+GE  T + NA++ MY K G V+DAK L
Sbjct: 239 TMVGVLSAC---AKKSDFEFGRWVHSYIERNRIGESLT-LSNAMLDMYTKCGSVEDAKRL 294

Query: 240 FKSFEDRDLVS-------------------------------WNTIVSSLSQNDKFLEAV 268
           F    ++D+VS                               WN ++S+  Q  K  EA+
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEAL 354

Query: 269 MFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
               ++ L +  KPD V++ S L AC+ L  +D G  IH Y  +  + + N  + ++L+D
Sbjct: 355 ELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKL-NCHLTTSLID 413

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MYC C +++    VF  +  K + +W+AMI G   + + ++A+ LF KM+E   + PNA 
Sbjct: 414 MYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQE-DKVKPNAV 472

Query: 388 TMSSVVPACVR-------SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           T ++++ AC            F   E ++G    +  G   Y    ++D+  R G +E +
Sbjct: 473 TFTNILCACSHVGLVEEGRTFFNQMELVYG----VLPGVKHYA--CMVDILGRAGLLEEA 526

Query: 441 KTIFDDMEVRDTVS-WNTMITGYTI 464
             + + M +    S W  ++   TI
Sbjct: 527 VELIEKMPMAPAASVWGALLGACTI 551


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 390/688 (56%), Gaps = 74/688 (10%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYAKLG-----RVDDAKTLFKSFEDRDLVSWNTIVS 256
           +Q H   LR G   +++I  +L+  YA +        + +  +F      ++  WN ++ 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
              +N++  +A++   +M +   +P+  +  +VL ACS   ++  G ++HA+ +++ +  
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIK 375
           D   + SA + MY +   +   RR+ D    +  A+ WNAMI GY +    E A  LF  
Sbjct: 171 DGHILSSA-IRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF-- 227

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
                                   E  PD+  I                NA++  +SR G
Sbjct: 228 ------------------------EGMPDRSMIS-------------TWNAMISGFSRCG 250

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E+++  FD+M+ RD +SW+ MI GY   G   +AL +  +MQ   +EK R        
Sbjct: 251 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ---KEKIR-------- 299

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                 P    L +VL  C  L AL +G+ IH YA RN +  D V+G++LVDMYAKCG +
Sbjct: 300 ------PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 353

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A  VF+ M  + V +WN +I    MHG  ++ ++L   M        ++ PNE+TF+ 
Sbjct: 354 DLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--------DINPNEITFVG 405

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  AC+H G+V +G+ +F  M+ +YG+EP  +HY C+VDLLGRAG + +A ++++ +P E
Sbjct: 406 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 465

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
              A  W +LLGACR H NVE+GE   + L  LEP  +  Y LLSNIY+ A  W++  +V
Sbjct: 466 PTPA-VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEV 524

Query: 736 RKKMKEMGVRKEPGCSWIEFG-DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           RK MKE G++  PG S I+ G  E+HKF+ GDGSH Q + ++  L+ + ER++ EGY PD
Sbjct: 525 RKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 584

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            S VL +++EEEKET +  HSEKLAI FG++NT PGTTIR+ KNLRVC DCH ATK IS+
Sbjct: 585 PSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQ 644

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +REII+RD  R+HHF+NG CSC D+W
Sbjct: 645 VYNREIIVRDRIRYHHFRNGACSCKDFW 672



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 215/458 (46%), Gaps = 81/458 (17%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           +N+  +AIL Y EM  +  +P+ + +PAVLKA +    ++ G Q+HAH+VK+G G     
Sbjct: 115 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG-GDGH 173

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + ++ + MY   G  +     + D+  E D V WN+MI    RFG+ + A E F  M   
Sbjct: 174 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM--- 230

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVD 234
                  +++S                             W     NA+++ +++ G V+
Sbjct: 231 ----PDRSMIST----------------------------W-----NAMISGFSRCGMVE 253

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+  F   ++RD +SW+ ++    Q   F+EA+    QM    I+P    + SVL AC+
Sbjct: 254 VAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACA 313

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +L  LD G+ IH YA RN I +D   +G++LVDMY  C  ++    VF+ +S+K+++ WN
Sbjct: 314 NLGALDQGRWIHTYAKRNSIQLD-GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 372

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           AMI G   +   E+A+ LF KM+    + PN  T   V+ AC            HG  ++
Sbjct: 373 AMIGGLAMHGRAEDAIDLFSKMD----INPNEITFVGVLNACA-----------HGGLVQ 417

Query: 415 LGL----------GRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
            GL          G +  +++   ++D+  R G +  ++ +   +    T + W  ++  
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477

Query: 462 YTICGQHGDA--------LMLLREMQNMEEEKNRNNVY 491
              C +HG+         ++L  E QN       +N+Y
Sbjct: 478 ---CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIY 512



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 7/150 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F EA+  + +M +  I+P  F  P+VL A A +  L  G+ IH + 
Sbjct: 269 SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 328

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +    L  V +  +LV+MY KCG  D+   ++VF++++ K+  SWN+MI  L   G+ +
Sbjct: 329 KRNSIQLDGV-LGTSLVDMYAKCGRIDL--AWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 385

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            A++ F  M   ++ P+  T V V  AC++
Sbjct: 386 DAIDLFSKM---DINPNEITFVGVLNACAH 412


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/629 (39%), Positives = 377/629 (59%), Gaps = 28/629 (4%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           + +L  + +  EA++   QMA+ G +       S+L  C     +  G+ +H + ++   
Sbjct: 37  LKTLCSSGQLKEALL---QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCY 93

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L  + ++ + L+ +Y  C  +   R +FD +  + +  W AMI+ Y Q  +  EAL LF+
Sbjct: 94  L-PSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFV 152

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M   +   PN  T ++++ +C  S  F     IH  AIK       +V ++L+DMY++ 
Sbjct: 153 EMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKS 211

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           GRI  +  +F  +  RD V+   +I+GY   G   +AL L R++Q               
Sbjct: 212 GRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQ--------------- 256

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +     NS+T  +VL     L+AL  GK++H++ +R+   + VV+ ++L+DMY+KCG 
Sbjct: 257 --IEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGN 314

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           + +ARR+FD MP R  I+WN +++ Y  HG  +EVLEL K M  E     +VKP+ +T++
Sbjct: 315 VCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN----KVKPDSITYL 370

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDY-GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           A+ + CSH  +   G+++FY M +   GIEP   HY CVVDLLGRAG+VE+A+  I  MP
Sbjct: 371 AVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMP 430

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
                A  W SLLG+CR+H +VEIG I  Q L  LEP+ A +YV+LSN+Y+SA  W+   
Sbjct: 431 F-VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMR 489

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           ++R  M+E  V KEPG SW+E    +H F A D +H + E++   ++ LS + +++GYVP
Sbjct: 490 NIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVP 549

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           D SCVL++V+EE+KE +L GHSEKLA+AFG++ TP GTTIRV KNLR+C DCH   KF+S
Sbjct: 550 DLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVS 609

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++ +R +ILRD  RFH+   G CSCGDYW
Sbjct: 610 RLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 230/452 (50%), Gaps = 23/452 (5%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +L++   S Q +EA+L    + R +++ +   + ++L      + +  G+++H H++K  
Sbjct: 36  NLKTLCSSGQLKEALLQMAILGR-EVKFE--GYDSILNECVSQRAIREGQRVHTHMIKTC 92

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
           Y L SV +   L+ +Y KC   + D   +FD + +++ VSW +MI+   + G    AL  
Sbjct: 93  Y-LPSVYLRTRLIVLYNKCDC-LGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNL 150

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMNALMAM 226
           F  ML S+ EP+ FT  ++  +C       G   GRQ+H  ++ R  E + F+ ++L+ M
Sbjct: 151 FVEMLRSDTEPNHFTFATILTSCYG---SLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 207

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK GR+ DA  +F    +RD+V+   I+S  +Q     EA+   RQ+ + G+  + V+ 
Sbjct: 208 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 267

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYCNCREVECGRRVFDF 344
           ASVL A S L  L+ GK++H++ LR+      S+V   ++L+DMY  C  V   RR+FD 
Sbjct: 268 ASVLTALSGLAALNHGKQVHSHVLRSG---QYSYVVLLNSLIDMYSKCGNVCYARRIFDS 324

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + ++    WNAM+ GY ++    E L LF  M E   + P++ T  +V+  C   +    
Sbjct: 325 MPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDM 384

Query: 405 KEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
              I  + +  K G+  D      ++D+  R GR+E +      M    T + W +++  
Sbjct: 385 GLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 444

Query: 462 YTICGQHGD---ALMLLREMQNMEEEKNRNNV 490
              C  H D    +++ +++  +E E   N V
Sbjct: 445 ---CRVHSDVEIGIIVGQKLLELEPENAGNYV 473



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 166/322 (51%), Gaps = 17/322 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++     EA+  ++EM RSD +P++F F  +L +  G      G+QIH+  
Sbjct: 130 SWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIA 189

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  Y  S + V ++L++MY K G  + D + VF  + E+D V+  ++I+   + G  + 
Sbjct: 190 IKRNYE-SHMFVGSSLLDMYAKSGR-ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           AL+ FR +    +  +S T  SV  A S L+    L  G+QVH + LR G+++   ++N+
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLA---ALNHGKQVHSHVLRSGQYSYVVLLNS 304

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
           L+ MY+K G V  A+ +F S  +R  +SWN ++   S++    E +   + M     +KP
Sbjct: 305 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 364

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYAL--RNDILIDNSFVGSALVDMYCNCREVECGR 339
           D ++  +VL  CSH ++ D G EI    +  ++ I  D    G  +VD+      VE   
Sbjct: 365 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG-CVVDLLGRAGRVE--- 420

Query: 340 RVFDFISDKKI----ALWNAMI 357
             FDFI         A+W +++
Sbjct: 421 EAFDFIKKMPFVPTAAIWGSLL 442


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/833 (32%), Positives = 462/833 (55%), Gaps = 32/833 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +   +  E I  Y  M    +  +  +   V+ +   ++D SLG+QI   V
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S + V N+L++M G  G+  +  Y +FD+++E+D +SWNS+ A   + G  + 
Sbjct: 170 VKSGLE-SKLAVENSLISMLGSMGNVDYANY-IFDQMSERDTISWNSIAAAYAQNGHIEE 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +   F +M   + E +S T   V+   S L   D  + GR +HG  +++G +    + N 
Sbjct: 228 SFRIFSLMRRFHDEVNSTT---VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 284

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYA  GR  +A  +FK    +DL+SWN++++S   + + L+A+  L  M   G   +
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 344

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  S L AC   +  + G+ +H   + +  L  N  +G+ALV MY    E+   RRV 
Sbjct: 345 YVTFTSALAACFTPDFFEKGRILHGLVVVSG-LFYNQIIGNALVSMYGKIGEMSESRRVL 403

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  WNA+I GY ++E  ++AL  F  M  V G+  N  T+ SV+ AC+     
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYITVVSVLSACLLPGDL 462

Query: 403 PDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            ++ + +H + +  G   D +V+N+L+ MY++ G +  S+ +F+ ++ R+ ++WN M+  
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   + L L+ +M        R+    LD+          +    L     L+ L 
Sbjct: 523 NAHHGHGEEVLKLVSKM--------RSFGVSLDQ---------FSFSEGLSAAAKLAVLE 565

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+++H  A++     D  + +A  DMY+KCG +    ++      R++ +WN++I A G
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 625

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG  +EV      M+  G     +KP  VTF++L  ACSH G+V +G+  +  +  D+G
Sbjct: 626 RHGYFEEVCATFHEMLEMG-----IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           +EP+ +H  CV+DLLGR+G++ +A   I+ MP + +    W SLL +C+IH N++ G  A
Sbjct: 681 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASCKIHGNLDRGRKA 739

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+NL  LEP+  S YVL SN++++   W+   +VRK+M    ++K+  CSW++  D++  
Sbjct: 740 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 799

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD +H Q+ +++  LE++ + +++ GYV DTS  L + +EE+KE  L  HSE+LA+A
Sbjct: 800 FGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALA 859

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           + +++TP G+T+R+ KNLR+C+DCH   KF+S++  R I+LRD  RFHHF+ G
Sbjct: 860 YALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 330/706 (46%), Gaps = 50/706 (7%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL-SLGK 97
            R + SW   +    R   + E +  + +M    I+P +F   +++ A      +   G 
Sbjct: 3   VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H  V K G  LS V V+  ++++YG  G       KVF+ + +++ VSW S++     
Sbjct: 63  QVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCS-RKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G+ +  ++ ++ M    V  +  ++  V  +C  L       LGRQ+ G  ++ G E  
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES---LGRQIIGQVVKSGLESK 177

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N+L++M   +G VD A  +F    +RD +SWN+I ++ +QN    E+      M  
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNC-RE 334
              + +  +++++L    H++    G+ IH   ++  +  D+   V + L+ MY    R 
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDSVVCVCNTLLRMYAGAGRS 295

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           VE    VF  +  K +  WN+++  +  +    +AL L   M   +G   N  T +S + 
Sbjct: 296 VEA-NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALA 353

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC   + F     +HG  +  GL  ++ + NAL+ MY ++G +  S+ +   M  RD V+
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 413

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I GY    +  D    L   Q M  E                  N IT+++VL  C
Sbjct: 414 WNALIGGYA---EDEDPDKALAAFQTMRVEG--------------VSSNYITVVSVLSAC 456

Query: 515 ---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
              G L  L +GK +HAY +     +D  V ++L+ MYAKCG L+ ++ +F+ +  RN+I
Sbjct: 457 LLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN ++ A   HG G+EVL+L+  M + G     V  ++ +F    +A +   ++ EG  
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFG-----VSLDQFSFSEGLSAAAKLAVLEEGQQ 569

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA-GAWSSLLGACR 690
           L + +    G E     +    D+  + G++    +++ M+PP  +++  +W+ L+ A  
Sbjct: 570 L-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISALG 625

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY---SSAQLWDKAM 733
            H   E  E+ A    +LE  +   +V   ++    S   L DK +
Sbjct: 626 RHGYFE--EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 669



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 26/251 (10%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M VR+ VSWNTM++G    G + + +   R+M +                 L  KP+S  
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD-----------------LGIKPSSFV 43

Query: 507 LMTVLPGCG-ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           + +++  CG + S   +G ++H +  ++ L +DV V +A++ +Y   G ++ +R+VF+ M
Sbjct: 44  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 103

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P RNV++W  +++ Y   GE +EV+++ K M  EG     V  NE +   + ++C     
Sbjct: 104 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG-----VGCNENSMSLVISSCGLLKD 158

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
            S G  +  ++    G+E        ++ +LG  G V+ A  + + M  E D   +W+S+
Sbjct: 159 ESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQM-SERDTI-SWNSI 215

Query: 686 LGACRIHQNVE 696
             A   + ++E
Sbjct: 216 AAAYAQNGHIE 226


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/687 (37%), Positives = 381/687 (55%), Gaps = 27/687 (3%)

Query: 200 RLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGR  H  +LR+       FI   L+ +Y+KL     A +   S  +  +VS+   +S 
Sbjct: 26  RLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISG 85

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL--PACSHLEMLDTGKEIHAYALRNDIL 315
            +Q+ + L A+     M   G++P+  +  S     AC+       G +IHA ALR   L
Sbjct: 86  AAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYL 145

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             + FV  A +DMY     +   RR+F+ + ++ +  WNA++T    +    E    +  
Sbjct: 146 PGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFG 205

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           + E  G+ PN  ++ +   AC  +      E  HG  +  G   D  V NA++D Y +  
Sbjct: 206 LREAGGM-PNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCR 264

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
               ++ +FD M VR++VSW +MI  Y   G   DAL +    +N  EE           
Sbjct: 265 CAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEE----------- 313

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                 P    + +VL  C  L  L  G+ +HA A+R+ +  ++ V SALVDMY KCG +
Sbjct: 314 ------PTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGV 367

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A +VF  MP RN++TWN +I  Y   G+ Q  L +   M+    R G   PN +T + 
Sbjct: 368 EDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMI----RSGGTSPNHITLVN 423

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  ACS  G+  +G +LF  M++ +G+EP  +HYACVVDLLGRAG  E AY++I  MP  
Sbjct: 424 VITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMR 483

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
                 W +LLGAC++H   E+G IA++ LF L+P  + ++VLLSN+ +SA  W +A DV
Sbjct: 484 -PSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDV 542

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           RK+MK +G++KEPGCSWI + + +H F A D  H ++ ++   L  L ++M+  GY+PDT
Sbjct: 543 RKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDT 602

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
              L++V EEEKET +  HSEKLA+AFG+++ PP   IR+ KNLR+C DCH+A KF+S I
Sbjct: 603 QYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGI 662

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             REII+RD  RFH+FK   CSC DYW
Sbjct: 663 VGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 24/440 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL--SLGKQIHAHVVKYGYGLSSVTVANT 118
           A+ ++  M R  ++P++F FP+  KA A       ++G QIHA  +++GY      V+  
Sbjct: 95  ALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCA 154

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
            ++MY K G  +    ++F+ +  ++ ++WN+++      G+     +A+  +  +   P
Sbjct: 155 AMDMYFKTGC-LGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMP 213

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           +  ++ +   AC+       L LG Q HG  +  G + +  + NA++  Y K      A+
Sbjct: 214 NVVSVCAFFNACAGAMF---LSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKAR 270

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F     R+ VSW +++ + +Q+    +A+         G +P    ++SVL  C+ L 
Sbjct: 271 AVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLL 330

Query: 298 MLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
            L+ G+ +HA A+R+   ID N FV SALVDMY  C  VE   +VF  + ++ +  WNAM
Sbjct: 331 GLNFGRALHAVAVRS--CIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAM 388

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKL 415
           I GY      + AL +F  M    G  PN  T+ +V+ AC R     D  E       + 
Sbjct: 389 IGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERF 448

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALML 474
           G+         ++D+  R G  E +  I   M +R ++S W  ++     C  HG     
Sbjct: 449 GVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGA---CKMHGKT--- 502

Query: 475 LREMQNMEEEKNRNNVYDLD 494
             E+  +  EK    +++LD
Sbjct: 503 --ELGRIASEK----LFELD 516



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 7/248 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E   +Y  +  +   P+  +  A   A AG   LSLG+Q H  VV  G+ +  V+V+N +
Sbjct: 198 ETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMD-VSVSNAM 256

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+ YGKC         VFD +  ++ VSW SMI    + G  + AL  +     +  EP+
Sbjct: 257 VDFYGKCRC-AGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            F + SV   C+ L    GL  GR +H  ++R   + N F+ +AL+ MY K G V+DA+ 
Sbjct: 316 DFMVSSVLTTCAGLL---GLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQ 372

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLE 297
           +F    +R+LV+WN ++   +       A+     M    G  P+ +++ +V+ ACS   
Sbjct: 373 VFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGG 432

Query: 298 MLDTGKEI 305
           +   G E+
Sbjct: 433 LTKDGYEL 440



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 4/168 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   SW   + + A+     +A+  Y+    +  +P +F   +VL   AG+  L+ 
Sbjct: 275 GMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +HA  V+     +++ VA+ LV+MYGKCG  + D  +VF  + E++ V+WN+MI   
Sbjct: 335 GRALHAVAVRSCID-ANIFVASALVDMYGKCGG-VEDAEQVFLDMPERNLVTWNAMIGGY 392

Query: 156 CRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLS-RRDGLRL 201
              G    AL  F  M+ S    P+  TLV+V  ACS     +DG  L
Sbjct: 393 AHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYEL 440


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/623 (40%), Positives = 371/623 (59%), Gaps = 29/623 (4%)

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P   S A +    +    +  G++ HA  + +  L  N+F+ + +V MY +  +++    
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHG-LQPNAFLAAKMVAMYASSGDLDSAVV 133

Query: 341 VFDFISDKKIALWNAMITGY---GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
           VFD I +    L+N++I  Y   G        L  + +M  + GL  +  T+  V+ +C 
Sbjct: 134 VFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFL-GLLGDNFTLPFVLKSCA 192

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                     +HG  +++GL  D YV  +L+DMY + G I  ++ +FD M VRD  SWN 
Sbjct: 193 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 252

Query: 458 MITGYTICGQHGDALMLLREM----------------QNMEEEKNRNNVYDLDETVLRPK 501
           +I GY   G+ G A  L   M                QN   E+      ++ +     K
Sbjct: 253 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 312

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN +T+++VLP C   +AL +G+ IH +A    L  +  V +AL  MYAKC  L  AR  
Sbjct: 313 PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCC 372

Query: 562 FDLMPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           FD++    +N+I WN +I AY  HG G E + + +NM+  G     V+P+ VTF+ L + 
Sbjct: 373 FDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAG-----VQPDAVTFMGLLSG 427

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSHSG++  G++ F  M   + +EP  +HYACVVDLLGRAG++ +A +LI+ MP +   +
Sbjct: 428 CSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPS 487

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL ACR H+N+EI E+AA+ LF+LEPD + +YVLLSN+Y+ A +W++   +R  +
Sbjct: 488 -VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALL 546

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           K  G++K PGCSWIE   + H F+  D SH Q+++++ FLE L E+++  GY+PDTS VL
Sbjct: 547 KYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVL 606

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H+++EEEKE  L  HSEKLAIAFG+LNT PG  +RV KNLR+C DCH ATKFISKI  RE
Sbjct: 607 HDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYERE 666

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           II+RD+ RFH FK+G+CSCGDYW
Sbjct: 667 IIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 211/467 (45%), Gaps = 68/467 (14%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P   ++  + + +     + LG+Q HA +V +G   ++  +A  +V MY   G D+    
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAF-LAAKMVAMYASSG-DLDSAV 132

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLA---LEAFRMMLYSNVEPSSFTLVSVALACS 191
            VFDRI     + +NS+I    R G        LEA+  M +  +   +FTL  V  +C+
Sbjct: 133 VVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCA 192

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +LSR   + +GR VHG  LRVG E + ++  +L+ MY K G + DA+ LF     RD+ S
Sbjct: 193 DLSR---VCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMAS 249

Query: 251 WNTI-------------------------------VSSLSQNDKFLEAVMFLRQMALRG- 278
           WN +                               +S  +QN    +A+    +M   G 
Sbjct: 250 WNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGS 309

Query: 279 -IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVE 336
            +KP+ V+I SVLPAC+    L+ G+ IH +A  N I L  NS V +AL  MY  C  + 
Sbjct: 310 EMKPNWVTIVSVLPACAQSAALERGRRIHDFA--NGIGLHLNSSVQTALAGMYAKCYSLV 367

Query: 337 CGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
             R  FD I+   K +  WN MIT Y  +    EA+ +F  M   AG+ P+A T   ++ 
Sbjct: 368 EARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR-AGVQPDAVTFMGLLS 426

Query: 395 ACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            C  S         F D   IH    ++    + Y    ++D+  R GR+  +K +   M
Sbjct: 427 GCSHSGLIDAGLNHFNDMGTIHSVEPRV----EHYA--CVVDLLGRAGRLVEAKELISQM 480

Query: 448 EVRDTVS-WNTMITGYTICGQHGD---ALMLLREMQNMEEEKNRNNV 490
            ++   S W  ++     C  H +   A +  R +  +E + + N V
Sbjct: 481 PMQAGPSVWGALLAA---CRSHRNLEIAELAARRLFVLEPDNSGNYV 524



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 165/398 (41%), Gaps = 52/398 (13%)

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L L I ++ +   +P+ ++ + +     R       +  H   +  GL  + ++   ++ 
Sbjct: 61  LQLRILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVA 120

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY+  G ++ +  +FD ++   ++ +N++I  YT  G        L     M        
Sbjct: 121 MYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMH------- 173

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                   L    ++ TL  VL  C  LS +  G+ +H   +R  L  D  VG++L+DMY
Sbjct: 174 -------FLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMY 226

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE------------------------ 585
            KCG +  AR++FD M VR++ +WN +I  Y   GE                        
Sbjct: 227 VKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMIS 286

Query: 586 -------GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
                   ++ L L   M+ +GS   E+KPN VT +++  AC+ S  +  G  + +   +
Sbjct: 287 GYTQNGFAEQALGLFDEMLQDGS---EMKPNWVTIVSVLPACAQSAALERGRRI-HDFAN 342

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ-NVEI 697
             G+  +      +  +  +   + +A    +M+        AW++++ A   H   VE 
Sbjct: 343 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 402

Query: 698 GEIAAQNLFL-LEPDVASHYVLLSNIYSSAQLWDKAMD 734
             I    L   ++PD  +   LLS   S + L D  ++
Sbjct: 403 VSIFENMLRAGVQPDAVTFMGLLSGC-SHSGLIDAGLN 439


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/821 (34%), Positives = 448/821 (54%), Gaps = 34/821 (4%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M    +  ++    +V+     +++  LG Q+  HV+KYG   ++V+VAN+L++M+G
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLE-TNVSVANSLISMFG 177

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
             GS     Y VF  + E D +SWNSMIA   R G    +L  F  M   + E +S TL 
Sbjct: 178 YFGSVEEACY-VFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKS 242
           ++   C ++   D L+ GR +H   L+ G WN+ +   N L+ MY+  GR +DA+ +F+ 
Sbjct: 237 TMLAGCGSV---DNLKWGRGIHSLVLKFG-WNSNVCASNTLITMYSDAGRCEDAELVFQG 292

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             ++D++SWN++++  +Q+   L+A+  L  M       + V+  S L ACS  E    G
Sbjct: 293 MVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG 352

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K +HA  +    L +N  VG+ALV +Y     +   ++VF  +  +    WNA+I G+  
Sbjct: 353 KILHALVIHVG-LHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHAD 411

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-SEAFPDKEGIHGHAIKLGLGRDR 421
           +E  +EAL  F  M E  G+  N  T+S+V+ AC+  ++       IH   I  G   D 
Sbjct: 412 SEEPDEALKAFKLMRE-EGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDE 470

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           YVQN+L+ MY++ G +  S  IFD +  ++  +WN M+      G   +AL  L EM   
Sbjct: 471 YVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEM--- 527

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                R    ++DE          +    L     L+ L +G+++H  A++    ++  V
Sbjct: 528 -----RRAGVNVDE---------FSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFV 573

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            SA +DMY KCG ++   R+      R+ ++WN++  ++  HG  ++  E    M+  G 
Sbjct: 574 ASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLG- 632

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               VKP+ VTF++L +ACSH GMV EG+  +  M  ++GI     H  C++DLLGR+G+
Sbjct: 633 ----VKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGR 688

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
             +A   I  MP        W SLL AC+ H N+E+G  A +NL  L+P   S YVL SN
Sbjct: 689 FAEAETFIKEMPVS-PTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSN 747

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           I ++   W+    +R++M    ++K+P CSW++  +++  F  GD SH Q+ +++  LE 
Sbjct: 748 ICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEE 807

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L + +++ GY+PD S  L + +EE+KE  L  HSE+LA+A+G++++P G+T+++ KNLRV
Sbjct: 808 LKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRV 867

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   KF S I  R+I+LRD  RFH F  G CSC DYW
Sbjct: 868 CGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 183/702 (26%), Positives = 331/702 (47%), Gaps = 39/702 (5%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL-GKQIHAHVVKYGYGLSS 112
           R+  +RE++  + EM    ++P   A  +++ A    + + + G Q+H  +VK G  LS 
Sbjct: 6   RAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGL-LSD 64

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V V  +LV++YG  G    D  KVF  +  K+ VSW +++     +G+  + +  +R M 
Sbjct: 65  VFVGTSLVHLYGNYGLAA-DAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              +  +  T+ SV   C +L       LG QV G+ ++ G E N  + N+L++M+   G
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENE---LLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V++A  +F   ++ D +SWN+++++  +N    E++     M     + +  +++++L 
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
            C  ++ L  G+ IH+  L+      N    + L+ MY +    E    VF  + +K + 
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFG-WNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            WN+M+  Y Q+    +AL L   M  +     N  T +S + AC   E   + + +H  
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMR-RGANYVTFTSALAACSDPEFATEGKILHAL 358

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            I +GL  +  V NAL+ +Y++ G +  +K +F  M  RD V+WN +I G+    +  +A
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEA 418

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK-GKEIHAYA 530
           L   + M+              +E V     N IT+  VL  C A + L + G  IHA+ 
Sbjct: 419 LKAFKLMR--------------EEGV---PINYITISNVLGACLAPNDLLEHGMPIHAFI 461

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           I     +D  V ++L+ MYAKCG LN +  +FD +  +N   WN ++ A   HG  +E L
Sbjct: 462 ILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEAL 521

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           + L  M     R   V  +E +F    AA +   ++ EG  L + +    G + +P   +
Sbjct: 522 KFLLEM-----RRAGVNVDEFSFSECLAAAAKLAILEEGQQL-HGLAVKLGCDSNPFVAS 575

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNVEIGEIAAQNLFLL- 708
             +D+ G+ G+++D  ++I   P   +++  +W+ L  +   H   E  +     +  L 
Sbjct: 576 ATMDMYGKCGEIDDVLRII---PRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLG 632

Query: 709 -EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
            +PD  +   LLS       + +        +KE G+  + G
Sbjct: 633 VKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIG 674



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 262/559 (46%), Gaps = 32/559 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  R+   +E++  +  M R   + ++     +L     + +L  G+ IH+ V
Sbjct: 199 SWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLV 258

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G+  S+V  +NTL+ MY   G    D   VF  + EKD +SWNSM+A   + G    
Sbjct: 259 LKFGWN-SNVCASNTLITMYSDAGR-CEDAELVFQGMVEKDMISWNSMMACYAQDGNCLD 316

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+    M Y     +  T  S   ACS+    +    G+ +H   + VG   N  + NA
Sbjct: 317 ALKLLATMFYMRRGANYVTFTSALAACSD---PEFATEGKILHALVIHVGLHENVIVGNA 373

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G + +AK +F++   RD V+WN ++   + +++  EA+   + M   G+  +
Sbjct: 374 LVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPIN 433

Query: 283 GVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            ++I++VL AC +  ++L+ G  IHA+ +      D  +V ++L+ MY  C ++     +
Sbjct: 434 YITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDE-YVQNSLITMYAKCGDLNSSNNI 492

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD ++ K  + WNAM+     + + EEAL   ++M   AG+  +  + S  + A  +   
Sbjct: 493 FDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRR-AGVNVDEFSFSECLAAAAKLAI 551

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             + + +HG A+KLG   + +V +A MDMY + G I+    I      R  +SWN + + 
Sbjct: 552 LEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSS 611

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           ++  G    A     EM N                 L  KP+ +T +++L  C     + 
Sbjct: 612 FSRHGFFEKAKETFHEMIN-----------------LGVKPDHVTFVSLLSACSHGGMVE 654

Query: 522 KGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMA 579
           +G   +   I+   +   +     ++D+  + G    A      MPV      W  ++ A
Sbjct: 655 EGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAA 714

Query: 580 YGMHGE---GQEVLE-LLK 594
              HG    G++ +E LLK
Sbjct: 715 CKTHGNLELGRKAVENLLK 733



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 227/471 (48%), Gaps = 34/471 (7%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE-MLDTGKEIHAYALRND 313
           +S   +   + E++ F  +M   G+KP G+++AS++ AC   E ML  G ++H + ++  
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +L D  FVG++LV +Y N        +VF  +  K +  W A++  Y   +Y E ++++ 
Sbjct: 61  LLSD-VFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAY--VDYGEPSMVMN 117

Query: 374 I-KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           I +     G+  N  TMSSV+  CV  E       + GH IK GL  +  V N+L+ M+ 
Sbjct: 118 IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
             G +E +  +F  M+  DT+SWN+MI  Y   G   ++L     M  + +E        
Sbjct: 178 YFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKE-------- 229

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                     NS TL T+L GCG++  L  G+ IH+  ++    ++V   + L+ MY+  
Sbjct: 230 ---------INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDA 280

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G    A  VF  M  +++I+WN ++  Y   G   + L+LL  M     RG     N VT
Sbjct: 281 GRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYM-RRGA----NYVT 335

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F +  AACS     +EG  + + +    G+  +      +V L  ++G + +A ++   M
Sbjct: 336 FTSALAACSDPEFATEG-KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTM 394

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL-EPDVASHYVLLSNI 722
           P        W++L+G    H + E  + A +   L+ E  V  +Y+ +SN+
Sbjct: 395 PKR--DGVTWNALIGG---HADSEEPDEALKAFKLMREEGVPINYITISNV 440


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/755 (35%), Positives = 428/755 (56%), Gaps = 34/755 (4%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           +NS+I      G  + A+  F  M+ S + P  +T      AC+  SR  G   G Q+HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGN--GIQIHG 158

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             +++G   + F+ N+L+  YA+ G +D A+ +F    +R++VSW +++   ++ D   +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218

Query: 267 AV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           AV +F R +    + P+ V++  V+ AC+ LE L+TG++++A+ +RN  +  N  + SAL
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSAL 277

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VDMY  C  ++  +R+FD      + L NAM + Y +     EAL +F  M + +G+ P+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPD 336

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             +M S + +C +       +  HG+ ++ G      + NAL+DMY +  R + +  IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK--NRNNVYD------LDETV 497
            M  +  V+WN+++ GY    ++G+        + M E+   + N +        L E  
Sbjct: 397 RMSNKTVVTWNSIVAGYV---ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 498 LRP----------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           +              + +T+M++   CG L AL   K I+ Y  +N +  DV +G+ LVD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           M+++CG    A  +F+ +  R+V  W   I A  M G  +  +EL  +M+ +G     +K
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG-----LK 568

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ V F+    ACSH G+V +G ++FY M   +G+ P   HY C+VDLLGRAG +E+A Q
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  MP E +    W+SLL ACR+  NVE+   AA+ + +L P+    YVLLSN+Y+SA 
Sbjct: 629 LIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+    VR  MKE G+RK PG S I+   + H+F +GD SH +   +   L+ +S+R  
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
             G+VPD S VL +V+E+EK  +L  HSEKLA+A+G++++  GTTIR+ KNLRVC+DCH 
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             KF SK+ +REIILRD  RFH+ + G CSCGD+W
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 272/576 (47%), Gaps = 68/576 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A S    EAIL ++ M  S I PD + FP  L A A  +    G QIH  +VK GY
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA- 167
               + V N+LV+ Y +CG ++    KVFD ++E++ VSW SMI   C + + D A +A 
Sbjct: 166 A-KDLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMI---CGYARRDFAKDAV 220

Query: 168 ---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              FRM+    V P+S T+V V  AC+ L   + L  G +V+      G E N  +++AL
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKL---EDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K   +D AK LF  +   +L   N + S+  +     EA+     M   G++PD 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVECGRRVF 342
           +S+ S + +CS L  +  GK  H Y LRN     DN  + +AL+DMY  C   +   R+F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIF 395

Query: 343 DFISDKKIALWNAMITGYGQN-EYD------------------------------EEALM 371
           D +S+K +  WN+++ GY +N E D                              EEA+ 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M+   G+  +  TM S+  AC    A    + I+ +  K G+  D  +   L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           SR G  E + +IF+ +  RD  +W   I    + G    A+ L  +M             
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM------------- 562

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMY 549
            +++ +   KP+ +  +  L  C     + +GKEI    ++   +   DV  G  +VD+ 
Sbjct: 563 -IEQGL---KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLL 617

Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            + G L  A ++ + MP+  N + WN ++ A  + G
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 229/525 (43%), Gaps = 82/525 (15%)

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           VA +C  L  R+ L   ++V  NS   G    F+ N+L+  YA  G  ++A         
Sbjct: 71  VARSCE-LGTRESLSFAKEVFENSESYG--TCFMYNSLIRGYASSGLCNEA--------- 118

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
                                 ++FLR M   GI PD  +    L AC+       G +I
Sbjct: 119 ---------------------ILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQI 156

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H   ++     D  FV ++LV  Y  C E++  R+VFD +S++ +  W +MI GY + ++
Sbjct: 157 HGLIVKMGYAKD-LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            ++A+ LF +M     + PN+ TM  V+ AC + E     E ++      G+  +  + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DMY +   I+++K +FD+    +    N M + Y   G   +AL +   M       
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM------- 328

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                  +D  V   +P+ I++++ +  C  L  +  GK  H Y +RN   +   + +AL
Sbjct: 329 -------MDSGV---RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM--------- 596
           +DMY KC   + A R+FD M  + V+TWN I+  Y  +GE     E  + M         
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438

Query: 597 -----VAEGSRGGE-------------VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
                + +GS   E             V  + VT +++ +AC H G +     ++Y ++ 
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           + GI+        +VD+  R G  E A  + N +        AW+
Sbjct: 499 N-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWT 540


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/704 (36%), Positives = 390/704 (55%), Gaps = 33/704 (4%)

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           ++ L   N      +RLGR VH   ++        F+ N L+ MY+KL   + A+ + + 
Sbjct: 8   ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
              R++VSW +++S L+QN  F  A++   +M   G+ P+  +      A + L +  TG
Sbjct: 68  TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K+IHA A++   ++D  FVG +  DMYC  R  +  R++FD I ++ +  WNA I+    
Sbjct: 128 KQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           +    EA+  FI+   + G  PN+ T  + + AC           +HG  ++ G   D  
Sbjct: 187 DGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V N L+D Y +  +I  S+ IF +M  ++ VSW +++  Y               +QN E
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY---------------VQNHE 290

Query: 483 EEKNR----NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           +EK       +  D+ ET      +   + +VL  C  ++ L  G+ IHA+A++  +   
Sbjct: 291 DEKASVLYLRSRKDIVET------SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + VGSALVDMY KCGC+  + + FD MP +N++T N +I  Y   G+    L L + M  
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM-- 402

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
              RG    PN +TF++L +ACS +G V  GM +F  M+  YGIEP  +HY+C+VD+LGR
Sbjct: 403 -APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG VE AY+ I  MP +      W +L  ACR+H   ++G +AA+NLF L+P  + ++VL
Sbjct: 462 AGMVERAYEFIKKMPIQ-PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN +++A  W +A  VR+++K +G++K  G SWI   +++H F A D SH  ++++   
Sbjct: 521 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTT 580

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L  L   M   GY PD    L+++ EEEK   +  HSEKLA+AFG+L+ P    IR+ KN
Sbjct: 581 LAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKN 640

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LR+C DCH   KF+S    REII+RD  RFH FK+G CSC DYW
Sbjct: 641 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 247/526 (46%), Gaps = 34/526 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           A   +LK       + LG+ +HA +VK         +AN L+NMY K   D  +  ++  
Sbjct: 8   ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL--DHPESARLVL 65

Query: 139 RIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           R+T  ++ VSW S+I+ L + G +  AL  F  M    V P+ FT      A ++     
Sbjct: 66  RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS----- 120

Query: 198 GLRL---GRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            LRL   G+Q+H  +++ G   + F+  +   MY K    DDA+ LF    +R+L +WN 
Sbjct: 121 -LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
            +S+   + +  EA+    +       P+ ++  + L ACS    L+ G ++H   LR+ 
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
              D S V + L+D Y  C+++     +F  +  K    W +++  Y QN  DE+A +L+
Sbjct: 240 FDTDVS-VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           ++  +   +  +   +SSV+ AC           IH HA+K  + R  +V +AL+DMY +
Sbjct: 299 LRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK 357

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G IE S+  FD+M  ++ V+ N++I GY   GQ   AL L  EM               
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA-------------- 403

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAK 551
                 P PN +T +++L  C    A+  G +I   ++R+    +      S +VDM  +
Sbjct: 404 -PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 552 CGCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGEGQEVLELLKNM 596
            G +  A      MP++  I+ W  +  A  MHG+ Q  L   +N+
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 21/446 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F  A++ + EM R  + P++F FP   KAVA ++    GKQIHA  
Sbjct: 75  SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMW-DVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G  L  V V  +  +MY  C + +  D  K+FD I E++  +WN+ I+     G+  
Sbjct: 135 VKCGRIL-DVFVGCSAFDMY--CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+EAF      +  P+S T  +   ACS+      L LG Q+HG  LR G + +  + N
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH---LNLGMQLHGLVLRSGFDTDVSVCN 248

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQMALRGIK 280
            L+  Y K  ++  ++ +F     ++ VSW ++V++  QN +  +A V++LR      ++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVE 307

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
                I+SVL AC+ +  L+ G+ IHA+A++   +    FVGSALVDMY  C  +E   +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQ 366

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVPACVRS 399
            FD + +K +   N++I GY      + AL LF +M     G  PN  T  S++ AC R+
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426

Query: 400 EAFPDKEGIHG---HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
            A  +   I         +  G + Y  + ++DM  R G +E +      M ++ T+S W
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHY--SCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484

Query: 456 NTMITGYTICGQHGDALMLLREMQNM 481
             +      C  HG   + L   +N+
Sbjct: 485 GAL---QNACRMHGKPQLGLLAAENL 507



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 25/389 (6%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           E+W   + +     + REAI ++IE  R D  P++  F A L A +    L+LG Q+H  
Sbjct: 175 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 234

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V++ G+  + V+V N L++ YGKC   +     +F  +  K+ VSW S++A   +  + +
Sbjct: 235 VLRSGFD-TDVSVCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A   +       VE S F + SV  AC+ ++   GL LGR +H ++++   E   F+ +
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMA---GLELGRSIHAHAVKACVERTIFVGS 349

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-- 279
           AL+ MY K G ++D++  F    +++LV+ N+++   +   +   A+    +MA RG   
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECG 338
            P+ ++  S+L ACS    ++ G +I   ++R+   I+  +   S +VDM      VE  
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVE-- 466

Query: 339 RRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP----NATTMS 390
            R ++FI        I++W A+      +   +  L+     E +  L P    N   +S
Sbjct: 467 -RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL---AAENLFKLDPKDSGNHVLLS 522

Query: 391 SVVPACVR-SEAFPDKEGIHGHAIKLGLG 418
           +   A  R +EA   +E + G  IK G G
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAG 551



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T+   SW   + +  ++++  +A + Y+   +  ++  +F   +VL A AG+  L LG+ 
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IHAH VK      ++ V + LV+MYGKCG  + D  + FD + EK+ V+ NS+I      
Sbjct: 332 IHAHAVKACVE-RTIFVGSALVDMYGKCGC-IEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389

Query: 159 GKWDLALEAFRMMLYSNVEPSS--FTLVSVALACS 191
           G+ D+AL  F  M      P+    T VS+  ACS
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/647 (38%), Positives = 375/647 (57%), Gaps = 36/647 (5%)

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +W++I+   + +     +      M    + P+     S+L A + L+       +HA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 310 LR----NDILIDNSFVGS--------ALVDMYCNCRE--VECGRRVFDFISDKKIALWNA 355
           +R    +D+ I N+ + +         + D++    E  ++C ++VFD +  + +  WN 
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +I G+ QN    EAL +  +M +   L P++ T+SS++P           + IHG+A++ 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G   D ++ ++L+DMY++  R+E S   F  +  +D +SWN++I G    G+    L   
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           R M              L E V   KP +++  +V+P C  L+AL+ G+++H   +R   
Sbjct: 317 RRM--------------LKENV---KPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +  + S+LVDMYAKCG +  AR VFD +  R+++ W  IIM   MHG   + + L +N
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M+ +G     V+P  V F+A+  ACSH+G+V EG   F  M+ D+GI P  +HYA V DL
Sbjct: 420 MLEDG-----VRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADL 474

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG++E+AY  I+ M         WS LL ACR H++VE+ E     L  ++ +    
Sbjct: 475 LGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGA 534

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           YVL+SNIYS+AQ W  A  +R  M++ G++K P CSWIE G+++H F+AGD SH   +++
Sbjct: 535 YVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKI 594

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           +  L+ L E+M KEGYV DT+ VLH+V+EE K  LL  HSE+LAIA+GI++T  GTTIRV
Sbjct: 595 NKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRV 654

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KN+RVC DCH A KFI+KI  REI +RD  RFHHFKNG+CSCGDYW
Sbjct: 655 IKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 257/530 (48%), Gaps = 53/530 (10%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD-RITEKDQVSWNSMIAT 154
            KQ+HAH+VK    L S    N LV       + +     +F+   +    ++W+S+I  
Sbjct: 28  AKQLHAHIVKTKGTLHS---DNILVLSLYSNLNLLQHSLHLFNSLPSPPPPLAWSSIIKC 84

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
                   L+  +F  M   +V P+     S+  A + L      +L   +H  ++R+G 
Sbjct: 85  YTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHH---KLAHSLHACTVRLGL 141

Query: 214 EWNTFIMNALMAMYAKL---GRVDD------------AKTLFKSFEDRDLVSWNTIVSSL 258
           + + +I NAL+  YAK    G+V D             K +F     RD+VSWNT+++  
Sbjct: 142 DSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGF 201

Query: 259 SQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           +QN  ++EA+  +R+M   G +KPD  +++S+LP  +    ++ GKEIH YA+RN    D
Sbjct: 202 AQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGD 261

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             F+GS+L+DMY  C  +EC  R F  +  K    WN++I G  QN   +  L  F +M 
Sbjct: 262 -VFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRML 320

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           +   + P A + SSV+PAC    A      +HG  ++LG   + ++ ++L+DMY++ G I
Sbjct: 321 K-ENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNI 379

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           ++++ +FD ++ RD V+W  +I G   C  HG AL  +   +NM E+  R          
Sbjct: 380 KMARYVFDRIDKRDMVAWTAIIMG---CAMHGHALDAVSLFENMLEDGVR---------- 426

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCL- 555
               P  +  M VL  C     + +G        R+  +A  +   +A+ D+  + G L 
Sbjct: 427 ----PCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLE 482

Query: 556 ---NFARRVFDLMPVRNVITWNVIIMAYGMHGE---GQEVLELLKNMVAE 599
              +F   +  + P  +V  W++++ A   H      ++VL+ L ++ +E
Sbjct: 483 EAYDFISNMRGVQPTGSV--WSILLAACRAHKSVELAEKVLDKLLSVDSE 530



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 217/443 (48%), Gaps = 37/443 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   ++     +    +  S+  M    + P+   FP++LKA   ++   L   +HA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 104 VKYGYGLSSVTVANTLVNMYGKC--GSDMWDVY------------KVFDRITEKDQVSWN 149
           V+ G   S + +AN L+N Y K      ++DV+            KVFD +  +D VSWN
Sbjct: 137 VRLGLD-SDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWN 195

Query: 150 SMIATLCRFGKWDLALEAFRMM-LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           ++IA   + G +  AL+  R M     ++P SFTL S+       +    +  G+++HG 
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSI---LPIFAEHVDVNKGKEIHGY 252

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           ++R G + + FI ++L+ MYAK  R++ +   F     +D +SWN+I++   QN +F   
Sbjct: 253 AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRG 312

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           + F R+M    +KP  VS +SV+PAC+HL  L  G+++H   +R     DN F+ S+LVD
Sbjct: 313 LGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG-FDDNEFIASSLVD 371

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++  R VFD I  + +  W A+I G   + +  +A+ LF  M E  G+ P   
Sbjct: 372 MYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE-DGVRPCYV 430

Query: 388 TMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
              +V+ AC  +         F   E   G    +  G + Y   A+ D+  R GR+E +
Sbjct: 431 AFMAVLTACSHAGLVDEGWRYFNSMERDFG----IAPGLEHYA--AVADLLGRAGRLEEA 484

Query: 441 KTIFDDME-VRDTVS-WNTMITG 461
                +M  V+ T S W+ ++  
Sbjct: 485 YDFISNMRGVQPTGSVWSILLAA 507


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 378/661 (57%), Gaps = 26/661 (3%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           +   Y +LG +  A   F      +L SWNTI++S S+N  F + +   ++M   G   D
Sbjct: 53  IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 112

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++   + AC  L +    K  H+ A++  +  D  +V  AL+++Y     +E   +VF
Sbjct: 113 SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGD-PYVAPALMNVYTELGSLEEAHKVF 171

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  K   +W  MI G+     +     LF +M   +G   +   +  ++ AC    A 
Sbjct: 172 EEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRR-SGFELDPFVVEGLIQACGNVYAG 230

Query: 403 PDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            + +  HG  IK   +  + ++Q +L+DMY + G ++ +  +F+++  RD V W+ +I G
Sbjct: 231 KEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAG 290

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G+  +++ + R+M              L ++V    PNS+T  +++  C +L +L 
Sbjct: 291 FARNGRALESISMFRQM--------------LADSV---TPNSVTFASIVLACSSLGSLK 333

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G+ +H Y IRN +  DV   ++ +DMYAKCGC+  A RVF  +P +NV +W+ +I  +G
Sbjct: 334 QGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFG 393

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
           MHG   E L L   M     R     PN VTF+++ +ACSHSG + EG   F  M  DYG
Sbjct: 394 MHGLCAEALNLFYEM-----RSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYG 448

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I P  +HYAC+VDLLGRAGK+++A   IN MP E   A AW +LLGACRIH+  E+ E  
Sbjct: 449 ITPVEEHYACMVDLLGRAGKIDEALSFINNMPTE-PGASAWGALLGACRIHRRAELAEEV 507

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ L  LE D +  YV+LSNIY+   +W+     R KM E G+ K  G + IE  ++++ 
Sbjct: 508 AKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYL 567

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F + D    ++ Q+     +L ERMR+ GYVPD   VLH+V++E K+ +LCGHSEKLAI 
Sbjct: 568 FSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIV 627

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+LN+  G  IR+ KN+RVC DCH A+KFIS I  R+II+RDV+RFHH ++G CSCGDY
Sbjct: 628 FGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDY 687

Query: 882 W 882
           W
Sbjct: 688 W 688



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 200/426 (46%), Gaps = 21/426 (4%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
            SW   L S +++  F + +  +  M +     D+F     +KA  G+      K  H+ 
Sbjct: 79  HSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSL 138

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +K         VA  L+N+Y + GS + + +KVF+ +  K+ V W  MI     F +  
Sbjct: 139 AIKLRLE-GDPYVAPALMNVYTELGS-LEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIM 220
              E F  M  S  E   F +  +  AC N+      + G+  HG  ++    + N F+ 
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAG---KEGKTFHGLCIKKNFIDSNFFLQ 253

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MY K G +D A  LF+    RD+V W+ I++  ++N + LE++   RQM    + 
Sbjct: 254 TSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVT 313

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ V+ AS++ ACS L  L  G+ +H Y +RN + +D     ++ +DMY  C  +    R
Sbjct: 314 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNY-TSFIDMYAKCGCIVTAYR 372

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF  I +K +  W+ MI G+G +    EAL LF +M  V  L PN+ T  SV+ AC  S 
Sbjct: 373 VFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL-PNSVTFVSVLSACSHSG 431

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
              +     G +    + RD  +         ++D+  R G+I+ + +  ++M      S
Sbjct: 432 RIEE-----GWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGAS 486

Query: 455 -WNTMI 459
            W  ++
Sbjct: 487 AWGALL 492



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 226/466 (48%), Gaps = 24/466 (5%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K F+ IT ++  SWN+++A+  +   +   L+ F+ ML       SF LV    AC  LS
Sbjct: 68  KAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLS 127

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              G +L   +    LR+ E + ++  ALM +Y +LG +++A  +F+    ++ V W  +
Sbjct: 128 LFQGAKLFHSL-AIKLRL-EGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185

Query: 255 VSS-LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +   L+ +++F    +F R M   G + D   +  ++ AC ++     GK  H   ++ +
Sbjct: 186 IKGHLNFSEEFGVFELFSR-MRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKN 244

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            +  N F+ ++LVDMY  C  ++   ++F+ IS + + +W+A+I G+ +N    E++ +F
Sbjct: 245 FIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMF 304

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M     + PN+ T +S+V AC    +      +HG+ I+ G+  D     + +DMY++
Sbjct: 305 RQM-LADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAK 363

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G I  +  +F  +  ++  SW+TMI G+ + G   +AL L  EM+++ +          
Sbjct: 364 CGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQ---------- 413

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKC 552
                   PNS+T ++VL  C     + +G        R+   T V    A +VD+  + 
Sbjct: 414 -------LPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRA 466

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           G ++ A    + MP       W  ++ A  +H   +   E+ K ++
Sbjct: 467 GKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 8/156 (5%)

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            LA   +++A  + N L   ++ G  +   Y + G L+ A + F+ +   N+ +WN I+ 
Sbjct: 27  TLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILA 86

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM-VSEGMDLFYKMK 637
           ++  +    +VL+L K M+ EG           +F  +FA  +  G+ + +G  LF+ + 
Sbjct: 87  SHSKNKCFYDVLQLFKRMLKEGKLVD-------SFNLVFAVKACFGLSLFQGAKLFHSLA 139

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
               +E  P     ++++    G +E+A+++   +P
Sbjct: 140 IKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVP 175


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 259/668 (38%), Positives = 382/668 (57%), Gaps = 60/668 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + FI   L+ +YA LG V  ++  F     +D+ +WN+++S+   N  F EA+    Q+ 
Sbjct: 50  SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL 109

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           L   I+PD  +   VL AC     L  G++IH +A +      N FV ++L+ MY     
Sbjct: 110 LVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQW-NVFVAASLIHMYSRFGF 165

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               R +FD +  + +  WNAMI+G  QN    +AL +  +M  + G+  N  T+ S++P
Sbjct: 166 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR-LEGIKMNFVTVVSILP 224

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             V                               DMY+++G ++ +  +F+ + V+D +S
Sbjct: 225 VFV-------------------------------DMYAKLGLLDSAHKVFEIIPVKDVIS 253

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WNT+ITGY   G   +A+ + + M+  +E                  PN  T +++LP  
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKE----------------IIPNQGTWVSILPAY 297

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             + AL +G +IH   I+  L  DV V + L+D+Y KCG L  A  +F  +P  + +TWN
Sbjct: 298 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 357

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II  +G+HG  ++ L+L   M+ EG     VKP+ VTF++L +ACSHSG V EG   F 
Sbjct: 358 AIISCHGIHGHAEKTLKLFGEMLDEG-----VKPDHVTFVSLLSACSHSGFVEEGKWCF- 411

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
           ++  +YGI+PS  HY C+VDLLGRAG +E AY  I  MP + D A  W +LLGACRIH N
Sbjct: 412 RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD-ASIWGALLGACRIHGN 470

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E+G+ A+  LF ++     +YVLLSNIY++   W+    VR   +E G++K PG S IE
Sbjct: 471 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 530

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
              ++  F  G+ SH + ++++  L  L+ +M+  GY+PD S VL +V E+EKE +L  H
Sbjct: 531 VNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSH 590

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SE+LAIAFGI++TPP + IR+ KNLRVC DCH ATKFIS+I  REI++RD  RFHHFK+G
Sbjct: 591 SERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDG 650

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 651 ICSCGDYW 658



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 258/577 (44%), Gaps = 82/577 (14%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           NF F +  K           K +HA +V  G  + S+ ++  LVN+Y   G D+      
Sbjct: 23  NFLFDSSTKT-------PFAKCLHALLVVAG-KVQSIFISTRLVNLYANLG-DVSLSRCT 73

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSR 195
           FD+I +KD  +WNSMI+     G +  A+  F +++L S + P  +T   V  AC  L  
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 133

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                 GR++H  + ++G +WN F+  +L+ MY++ G    A++LF     RD+ SWN +
Sbjct: 134 ------GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 187

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S L QN    +A+  L +M L GIK + V++ S+LP                       
Sbjct: 188 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP----------------------- 224

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                      VDMY     ++   +VF+ I  K +  WN +ITGY QN    EA+ ++ 
Sbjct: 225 ---------VFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 275

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            MEE   + PN  T  S++PA     A      IHG  IK  L  D +V   L+D+Y + 
Sbjct: 276 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 335

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           GR+  + ++F  +    +V+WN +I+ + I G     L L  EM              LD
Sbjct: 336 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM--------------LD 381

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKE----IHAYAIRNMLATDVVVGSALVDMYA 550
           E V   KP+ +T +++L  C     + +GK     +  Y I+  L         +VD+  
Sbjct: 382 EGV---KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY----GCMVDLLG 434

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           + G L  A      MP++ +   W  ++ A  +HG     +EL K       R  EV   
Sbjct: 435 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN----IELGK---FASDRLFEVDSK 487

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            V +  L +    +    EG+D    +  + G++ +P
Sbjct: 488 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 524



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 202/430 (46%), Gaps = 46/430 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   + +   +  F EAI  + ++   S+I+PD + FP VLKA   + D   G++IH  
Sbjct: 84  AWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCW 140

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
             K G+   +V VA +L++MY + G        +FD +  +D  SWN+MI+ L + G   
Sbjct: 141 AFKLGFQW-NVFVAASLIHMYSRFGFTG-IARSLFDDMPFRDMGSWNAMISGLIQNGNAA 198

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            AL+    M    ++ +  T+VS                                 I+  
Sbjct: 199 QALDVLDEMRLEGIKMNFVTVVS---------------------------------ILPV 225

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKP 281
            + MYAKLG +D A  +F+    +D++SWNT+++  +QN    EA+   + M   + I P
Sbjct: 226 FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 285

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +  S+LPA +H+  L  G +IH   ++ ++ +D  FV + L+D+Y  C  +     +
Sbjct: 286 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD-VFVATCLIDVYGKCGRLVDAMSL 344

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  +  +    WNA+I+ +G + + E+ L LF +M +  G+ P+  T  S++ AC  S  
Sbjct: 345 FYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD-EGVKPDHVTFVSLLSACSHSGF 403

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
             + +       + G+         ++D+  R G +E++     DM ++ D   W  ++ 
Sbjct: 404 VEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLG 463

Query: 461 GYTICGQHGD 470
               C  HG+
Sbjct: 464 A---CRIHGN 470



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/421 (20%), Positives = 174/421 (41%), Gaps = 98/421 (23%)

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           P  + +H   +  G  +  ++   L+++Y+ +G + +S+  FD +  +D  +WN+MI+ Y
Sbjct: 33  PFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAY 92

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G   +A+    ++  + E                 +P+  T   VL  CG    L  
Sbjct: 93  VHNGHFHEAIGCFYQLLLVSE----------------IRPDFYTFPPVLKACG---TLVD 133

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G++IH +A +     +V V ++L+ MY++ G    AR +FD MP R++ +WN +I     
Sbjct: 134 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 193

Query: 583 HGEGQEVLELLKNMVAEGSRGG----------------------------EVKP--NEVT 612
           +G   + L++L  M  EG +                              E+ P  + ++
Sbjct: 194 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVIS 253

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY----------------------- 649
           +  L    + +G+ SE ++++  M++   I P+   +                       
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313

Query: 650 ------------ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE- 696
                        C++D+ G+ G++ DA  L   +P E   +  W++++    IH + E 
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE--SSVTWNAIISCHGIHGHAEK 371

Query: 697 ----IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR---KEPG 749
                GE+  +    ++PD  +   LLS   S +   ++     + M+E G++   K  G
Sbjct: 372 TLKLFGEMLDEG---VKPDHVTFVSLLSAC-SHSGFVEEGKWCFRLMQEYGIKPSLKHYG 427

Query: 750 C 750
           C
Sbjct: 428 C 428


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 390/688 (56%), Gaps = 74/688 (10%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYAKLG-----RVDDAKTLFKSFEDRDLVSWNTIVS 256
           +Q H   LR G   +++I  +L+  YA +        + +  +F      ++  WN ++ 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
              +N++  +A++   +M +   +P+  +  +VL ACS   ++  G ++HA+ +++ +  
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEEALMLFIK 375
           D   + SA + MY +   +   RR+ D    +  A+ WNAMI GY +    E A  LF  
Sbjct: 172 DGHILSSA-IRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF-- 228

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
                                   E  PD+  I                NA++  +SR G
Sbjct: 229 ------------------------EGMPDRSMIS-------------TWNAMISGFSRCG 251

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E+++  FD+M+ RD +SW+ MI GY   G   +AL +  +MQ   +EK R        
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ---KEKIR-------- 300

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                 P    L +VL  C  L AL +G+ IH YA RN +  D V+G++LVDMYAKCG +
Sbjct: 301 ------PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 354

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A  VF+ M  + V +WN +I    MHG  ++ ++L   M        ++ PNE+TF+ 
Sbjct: 355 DLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--------DIYPNEITFVG 406

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  AC+H G+V +G+ +F  M+ +YG+EP  +HY C+VDLLGRAG + +A ++++ +P E
Sbjct: 407 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 466

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
              A  W +LLGACR H NVE+GE   + L  LEP  +  Y LLSNIY+ A  W++  +V
Sbjct: 467 PTPA-VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEV 525

Query: 736 RKKMKEMGVRKEPGCSWIEFG-DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           RK MKE G++  PG S I+ G  E+HKF+ GDGSH Q + ++  L+ + ER++ EGY PD
Sbjct: 526 RKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 585

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            S VL +++EEEKET +  HSEKLAI FG++NT PGTTIR+ KNLRVC DCH ATK IS+
Sbjct: 586 PSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQ 645

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +REII+RD  R+HHF+NG CSC D+W
Sbjct: 646 VYNREIIVRDRIRYHHFRNGACSCKDFW 673



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 215/458 (46%), Gaps = 81/458 (17%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           +N+  +AIL Y EM  +  +P+ + +PAVLKA +    ++ G Q+HAH+VK+G G     
Sbjct: 116 NNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLG-GDGH 174

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + ++ + MY   G  +     + D+  E D V WN+MI    RFG+ + A E F  M   
Sbjct: 175 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDR 234

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVD 234
           ++                                   +  W     NA+++ +++ G V+
Sbjct: 235 SM-----------------------------------ISTW-----NAMISGFSRCGMVE 254

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+  F   ++RD +SW+ ++    Q   F+EA+    QM    I+P    + SVL AC+
Sbjct: 255 VAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACA 314

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +L  LD G+ IH YA RN I +D   +G++LVDMY  C  ++    VF+ +S+K+++ WN
Sbjct: 315 NLGALDQGRWIHTYAKRNSIQLDG-VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 373

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           AMI G   +   E+A+ LF KM+    ++PN  T   V+ AC            HG  ++
Sbjct: 374 AMIGGLAMHGRAEDAIDLFSKMD----IYPNEITFVGVLNACA-----------HGGLVQ 418

Query: 415 LGL----------GRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
            GL          G +  +++   ++D+  R G +  ++ +   +    T + W  ++  
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478

Query: 462 YTICGQHGDA--------LMLLREMQNMEEEKNRNNVY 491
              C +HG+         ++L  E QN       +N+Y
Sbjct: 479 ---CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIY 513



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 7/150 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F EA+  + +M +  I+P  F  P+VL A A +  L  G+ IH + 
Sbjct: 270 SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 329

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +    L  V +  +LV+MY KCG  D+   ++VF++++ K+  SWN+MI  L   G+ +
Sbjct: 330 KRNSIQLDGV-LGTSLVDMYAKCGRIDL--AWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 386

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            A++ F  M   ++ P+  T V V  AC++
Sbjct: 387 DAIDLFSKM---DIYPNEITFVGVLNACAH 413


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/782 (34%), Positives = 432/782 (55%), Gaps = 39/782 (4%)

Query: 106 YGYGLSS-----VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           Y   LSS     V + N  + M+ + G ++ D + VF +++E++  SWN ++    + G 
Sbjct: 117 YSIALSSMSSLGVELGNAFLAMFVRFG-NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY 175

Query: 161 WDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           +D A+  + RM+    V+P  +T   V   C  +     L  G++VH + +R G E +  
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP---DLARGKEVHVHVVRYGYELDID 232

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           ++NAL+ MY K G V  A+ LF     RD++SWN ++S   +N    E +     M    
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + PD +++ SV+ AC  L     G++IHAY +     +D S V ++L  MY N       
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS-VCNSLTQMYLNAGSWREA 351

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            ++F  +  K I  W  MI+GY  N   ++A+  + +M +   + P+  T+++V+ AC  
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACAT 410

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
                    +H  AIK  L     V N L++MYS+   I+ +  IF ++  ++ +SW ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G  +  +  +AL+ LR+M+                  +  +PN+ITL   L  C  + 
Sbjct: 471 IAGLRLNNRCFEALIFLRQMK------------------MTLQPNAITLTAALAACARIG 512

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  GKEIHA+ +R  +  D  + +AL+DMY +CG +N A   F+    ++V +WN+++ 
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y   G+G  V+EL   MV        V+P+E+TFI+L   CS S MV +G+  F KM +
Sbjct: 572 GYSERGQGSMVVELFDRMVKS-----RVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-E 625

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           DYG+ P+  HYACVVDLLGRAG++++A++ I  MP   D A  W +LL ACRIH  +++G
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA-VWGALLNACRIHHKIDLG 684

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E++AQ++F L+     +Y+LL N+Y+    W +   VR+ MKE G+  + GCSW+E   +
Sbjct: 685 ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H FL+ D  H Q+++++  LE   E+M + G    +     +  E  ++ + CGHSE+ 
Sbjct: 745 VHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERK 804

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           AIAFG++NT PG  I V KNL +C +CH   KFISK   REI +RD   FHHFK+G CSC
Sbjct: 805 AIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSC 864

Query: 879 GD 880
           GD
Sbjct: 865 GD 866



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 182/565 (32%), Positives = 281/565 (49%), Gaps = 36/565 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +   A+   F EA+  Y  M     ++PD + FP VL+   GI DL+ GK++H H
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV+YGY L  + V N L+ MY KCG D+     +FDR+  +D +SWN+MI+     G   
Sbjct: 222 VVRYGYEL-DIDVVNALITMYVKCG-DVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             LE F  M   +V+P   TL SV  AC  L  R   RLGR +H   +  G   +  + N
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCN 336

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MY   G   +A+ LF   E +D+VSW T++S    N    +A+   R M    +KP
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++A+VL AC+ L  LDTG E+H  A++   LI    V + L++MY  C+ ++    +
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKAR-LISYVIVANNLINMYSKCKCIDKALDI 455

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  I  K +  W ++I G   N    EAL+   +M+    L PNA T+++ + AC R  A
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGA 513

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH H ++ G+G D ++ NAL+DMY R GR+  + + F+  + +D  SWN ++TG
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTG 572

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y+  GQ    + L   M                    R +P+ IT +++L GC     + 
Sbjct: 573 YSERGQGSMVVELFDRMVKS-----------------RVRPDEITFISLLCGCSKSQMVR 615

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           +G    +      +  ++   + +VD+  + G L  A +    MPV  +   W  ++ A 
Sbjct: 616 QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 581 GMH-----GE--GQEVLELLKNMVA 598
            +H     GE   Q + EL K  V 
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVG 700



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           LR   +    + ++  C    A  +G ++++ A+ +M +  V +G+A + M+ + G L  
Sbjct: 88  LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVD 147

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  VF  M  RN+ +WNV++  Y   G   E + L   M+  G     VKP+  TF  + 
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG----VKPDVYTFPCVL 203

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
             C     ++ G ++   +   YG E   D    ++ +  + G V+ A  L + MP    
Sbjct: 204 RTCGGIPDLARGKEVHVHVV-RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-- 260

Query: 678 KAGAWSSLL------GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
              +W++++      G C  H+ +E+    A     ++PD+ +    L+++ S+ +L
Sbjct: 261 DIISWNAMISGYFENGMC--HEGLEL--FFAMRGLSVDPDLMT----LTSVISACEL 309


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/813 (33%), Positives = 432/813 (53%), Gaps = 60/813 (7%)

Query: 116  ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL-CRFGKWDLALEAFRMMLYS 174
            A  L++ Y   G D W    VF     ++ + WNS +       G   + LE F+ +   
Sbjct: 610  AKNLISSYLGFG-DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668

Query: 175  NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
             V   S  + SVAL     +R   + LG ++HG  ++ G + + ++  ALM  Y +   +
Sbjct: 669  GVVFDS-EVYSVAL--KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGL 725

Query: 234  DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            + A  +F    + + + WN  +    Q++K  + V   R+M    +K +  +I  VL AC
Sbjct: 726  EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQAC 785

Query: 294  SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
              +  L+  K+IH Y  R  +  D S   + L+ MY    ++E  RRVFD + ++  + W
Sbjct: 786  GKMGALNAAKQIHGYVFRFGLDSDVSLC-NPLISMYSKNGKLELARRVFDSMENRNTSSW 844

Query: 354  NAMITGYGQNEYDEEALMLFIKME----------------------------------EV 379
            N+MI+ Y    +  +A  LF ++E                                  + 
Sbjct: 845  NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904

Query: 380  AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             G  PN+++M+SV+ A          +  HG+ ++ G   D YV  +L+DMY +   +  
Sbjct: 905  EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXS 964

Query: 440  SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV-- 497
            ++ +FD+M+ R+  +WN++++GY+  G   DAL LL +M   E+E  + ++   +  +  
Sbjct: 965  AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM---EKEGIKPDLVTWNGMISG 1021

Query: 498  ------LRPK--PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                   R    PNS ++  +L  C +LS L KGKEIH  +IRN    DV V +AL+DMY
Sbjct: 1022 YAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081

Query: 550  AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            +K   L  A +VF  +  + + +WN +IM + + G G+E + +   M   G     V P+
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG-----VGPD 1136

Query: 610  EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
             +TF AL +AC +SG++ EG   F  M  DY I P  +HY C+VDLLGRAG +++A+ LI
Sbjct: 1137 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 1196

Query: 670  NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
            + MP + D A  W +LLG+CRIH+N+   E AA+NLF LEP+ +++Y+L+ N+YS    W
Sbjct: 1197 HTMPLKPD-ATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRW 1255

Query: 730  DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
            +    +R+ M   GVR     SWI+    +H F + +  H  + +++  L  L   M+K 
Sbjct: 1256 EDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1315

Query: 790  GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
            GYVPD +CV  N++E EK+ +L  H+EKLAI +G++    G  IRV KN R+C+DCH A 
Sbjct: 1316 GYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAA 1375

Query: 850  KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K+IS +++RE+ LRD  RFHHF+ G CSC D+W
Sbjct: 1376 KYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 277/609 (45%), Gaps = 102/609 (16%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            S++E  +S A S      +  + E+    +  D+  +   LK    + D+ LG +IH  +
Sbjct: 643  SFVEEFKSSAGSLHI--VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCL 700

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWNSMIATLCRFGK 160
            +K G+ L  V +   L+N YG+C    W + K   VF  +   + + WN  I    +  K
Sbjct: 701  IKRGFDLD-VYLRCALMNFYGRC----WGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 755

Query: 161  WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
                +E FR M +S ++  + T+V V  AC  +     L   +Q+HG   R G + +  +
Sbjct: 756  LQKGVELFRKMQFSFLKAETATIVRVLQACGKMG---ALNAAKQIHGYVFRFGLDSDVSL 812

Query: 220  MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ----ND------------- 262
             N L++MY+K G+++ A+ +F S E+R+  SWN+++SS +     ND             
Sbjct: 813  CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 872

Query: 263  -------------KFL-----EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                          FL     E +  L++M   G KP+  S+ SVL A S L  L+ GKE
Sbjct: 873  KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 932

Query: 305  IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
             H Y LRN    D  +VG++L+DMY     +   + VFD + ++ I  WN++++GY    
Sbjct: 933  THGYVLRNGFDCD-VYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKG 991

Query: 365  YDEEALMLFIKMEE-------------VAG--LW--------PNATTMSSVVPACVRSEA 401
              E+AL L  +ME+             ++G  +W        PN+ +++ ++ AC     
Sbjct: 992  MFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSL 1051

Query: 402  FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                + IH  +I+ G   D +V  AL+DMYS+   ++ +  +F  ++ +   SWN MI G
Sbjct: 1052 LQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMG 1111

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            + I G   +A+ +  EMQ +                    P++IT   +L  C     + 
Sbjct: 1112 FAIFGLGKEAISVFNEMQKVG-----------------VGPDAITFTALLSACKNSGLIG 1154

Query: 522  KGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
            +G     +   + + TD  +   L      VD+  + G L+ A  +   MP++ +   W 
Sbjct: 1155 EG-----WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 1209

Query: 575  VIIMAYGMH 583
             ++ +  +H
Sbjct: 1210 ALLGSCRIH 1218


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/518 (46%), Positives = 325/518 (62%), Gaps = 24/518 (4%)

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ PN  T+S+VV AC    +    +  H + IK+G   D  VQ AL+ MY+R G +E +
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEE 484
             +FD M  R T +WN MITG+        AL L  EM                QN   +
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
           ++ N    + +T +  K +   + +VL  C  L+AL  G++ HAY +++  A D+VVGSA
Sbjct: 125 ESLNVFNQMRKTGM--KSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LVDMYAK G +  A +VFD MP RN ++WN II     HG G + + L + M+  G    
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG---- 238

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
            +KPNE++F+ + +ACSH+G+V+EG   F  M  +YGI P   HY C++DLLGRAG +++
Sbjct: 239 -IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDE 297

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A   IN MP E D    W +LLGACRIH N E+ +  A++L  +E  +A  YVLLSNIY+
Sbjct: 298 AENFINGMPVEPD-VSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYA 356

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           +A  WD A  VRK MK+ GV K+PG SWIE    +H F+AG+ SH Q +++H FLE+LS 
Sbjct: 357 AAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSR 416

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           +M+  GYVP+ + VL +V ++EKE  L  HSEKLAIAFGI+NT PGTTIRVAKNLRVC D
Sbjct: 417 KMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGD 476

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH   KFIS   +R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 477 CHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 173/369 (46%), Gaps = 61/369 (16%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M  +G+KP+  ++++V+ AC+ +  L+ GK+ H Y ++     D   V +ALV MY  C 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESD-VVVQTALVHMYARCG 59

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE---------VAGLWP 384
            +E    VFD +S++    WNAMITG+ QN   ++AL LF +M E         +AG   
Sbjct: 60  SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119

Query: 385 NAT---------------------TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           N                        M SV+ AC    A       H + ++ G   D  V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG---DALMLLREMQN 480
            +AL+DMY++ G +E +  +FD M  R+ VSWN++ITG   C QHG   DA++L  +M  
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITG---CAQHGRGNDAVLLFEQM-- 234

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDV 539
                       L   +   KPN I+ + VL  C     + +G+       +N  +  DV
Sbjct: 235 ------------LQAGI---KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDV 279

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
              + ++D+  + GCL+ A    + MPV  +V  W  ++ A  +HG  +     L   +A
Sbjct: 280 SHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTE-----LAKRIA 334

Query: 599 EGSRGGEVK 607
           E   G EV+
Sbjct: 335 EHLLGMEVQ 343



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 172/355 (48%), Gaps = 46/355 (12%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M    ++P+ F    V+KA A I  L  GKQ H +++K G+  S V V   LV+MY +CG
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFE-SDVVVQTALVHMYARCG 59

Query: 128 S------------------------------DMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           S                              DM    K+F  ++E+D VSW ++IA   +
Sbjct: 60  SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G  D +L  F  M  + ++   F + SV  AC++L+    L LGRQ H   ++ G   +
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLA---ALELGRQFHAYVVQSGFALD 176

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + +AL+ MYAK G ++DA  +F     R+ VSWN+I++  +Q+ +  +AV+   QM  
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GIKP+ +S   VL ACSH  +++ G+       +N  ++ +    + ++D+        
Sbjct: 237 AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL---GRAG 293

Query: 337 CGRRVFDFIS----DKKIALWNAMITG---YGQNEYDEEALMLFIKME-EVAGLW 383
           C     +FI+    +  +++W A++     +G  E  +      + ME ++AG++
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIY 348



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 42/340 (12%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           M+   V+P+ FTL +V  AC++++    L  G+Q H   +++G E +  +  AL+ MYA+
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIA---SLEQGKQAHNYIIKMGFESDVVVQTALVHMYAR 57

Query: 230 LGRVDDAK-------------------------------TLFKSFEDRDLVSWNTIVSSL 258
            G ++DA                                 LF    +RD+VSW  +++  
Sbjct: 58  CGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +QN    E++    QM   G+K D   + SVL AC+ L  L+ G++ HAY +++   +D 
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD- 176

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             VGSALVDMY     +E   +VFD +  +    WN++ITG  Q+    +A++LF +M +
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRI 437
            AG+ PN  +   V+ AC  +    +  G      +  G+  D      ++D+  R G +
Sbjct: 237 -AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCL 295

Query: 438 EISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLR 476
           + ++   + M V   VS W  ++     C  HG+  +  R
Sbjct: 296 DEAENFINGMPVEPDVSVWGALLGA---CRIHGNTELAKR 332



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 89/149 (59%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++    E++  + +M ++ ++ D F   +VL A A +  L LG+Q HA+V
Sbjct: 109 SWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYV 168

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+ L  + V + LV+MY K GS M D  +VFD++ ++++VSWNS+I    + G+ + 
Sbjct: 169 VQSGFAL-DIVVGSALVDMYAKSGS-MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGND 226

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A+  F  ML + ++P+  + V V  ACS+
Sbjct: 227 AVLLFEQMLQAGIKPNEISFVGVLSACSH 255


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/688 (36%), Positives = 397/688 (57%), Gaps = 32/688 (4%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V ++L+ +Y + G  + D  ++FD++  KD V WN M+    + G+ + A++ F  M   
Sbjct: 9   VGSSLIKLYAENGC-IEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNC 67

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
             +P+S T  SV   C++ +  +    G Q+HG  +  G  ++  + NAL+AMY+K G++
Sbjct: 68  QTKPNSITFASVLSICASEALSE---FGNQLHGLVISCGFHFDPLVANALVAMYSKFGQL 124

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            DA  LF +  D ++V+WN +++   QN    EA +   +M   G+ PD ++ AS LP+ 
Sbjct: 125 SDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSV 184

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           +    L  GKEIH Y LR+ I +D  F+ SAL+D+Y  CR+V    ++F   ++  I + 
Sbjct: 185 TESASLKQGKEIHGYILRHGIALD-VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            A+I+GY  N  + +AL +F  + E   + PNA T++SV+PAC         + +H + +
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWLLE-EKMSPNAVTLASVLPACAGLATLNLGKELHANIL 302

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           K GL   R+V +A+MDMY++ GR++++  IF  M  +D V WN +IT  +  G+  +A+ 
Sbjct: 303 KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAID 362

Query: 474 LLREMQNMEEEKNRNNV-YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
           L R+M        R  + YD            +++   L  C  L AL  GK IH++ I+
Sbjct: 363 LFRQM-------GREGLSYD-----------CVSISAALSACANLPALHHGKAIHSFMIK 404

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
               ++V   SAL+DMY KCG L+ AR VFD+M  +N ++WN II AYG HG  +  L L
Sbjct: 405 GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLAL 464

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M+ +G     ++P+ VTF+ + +AC H+G V +G+  F  M ++YGI    +HYAC+
Sbjct: 465 FHKMLEDG-----IQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACI 519

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VDL GRAG++ +A++ I  MP   D  G W +LLGACR+H NVE+ E+A++ L  L+P+ 
Sbjct: 520 VDLFGRAGRLNEAFETIKNMPFSPDD-GVWGTLLGACRVHGNVELAEVASRCLLDLDPEN 578

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           +  YVLLSN+++ A  W     +R  MK+ GV+K PG SWIE     H F+A DGSH +S
Sbjct: 579 SGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPES 638

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLH 800
            Q++  L NL   +RKEGY P     +H
Sbjct: 639 AQIYSVLNNLLLELRKEGYCPKPYLPMH 666



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 275/529 (51%), Gaps = 32/529 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ ++L+ +YA+ G ++DA+ LF    ++D V WN +++   +  +   AV     M 
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
               KP+ ++ ASVL  C+   + + G ++H   +      D   V +ALV MY    ++
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFD-PLVANALVAMYSKFGQL 124

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               ++F+ + D  +  WN MI G+ QN + +EA +LF +M   AG+ P++ T +S +P+
Sbjct: 125 SDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMIS-AGVSPDSITFASFLPS 183

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
              S +    + IHG+ ++ G+  D ++++AL+D+Y +   + ++  IF      D V  
Sbjct: 184 VTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             +I+GY + G + DAL + R +  +EE+ +               PN++TL +VLP C 
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWL--LEEKMS---------------PNAVTLASVLPACA 286

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L+ L  GKE+HA  +++ L     VGSA++DMYAKCG L+ A ++F  MP ++ + WN 
Sbjct: 287 GLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNA 346

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-Y 634
           II     +G+ QE ++L + M  EG     +  + V+  A  +AC++   +  G  +  +
Sbjct: 347 IITNCSQNGKPQEAIDLFRQMGREG-----LSYDCVSISAALSACANLPALHHGKAIHSF 401

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            +K  +  E   +  + ++D+ G+ G +  A  + +MM  + +   +W+S++ A   H +
Sbjct: 402 MIKGAFDSEVFAE--SALIDMYGKCGNLSVARCVFDMMREKNEV--SWNSIIAAYGSHGH 457

Query: 695 VEIGEIAAQNLFL--LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           +E+       +    ++PD  +   +LS    + Q+ DK +   + M E
Sbjct: 458 LEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQV-DKGIQYFRCMTE 505



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/416 (32%), Positives = 220/416 (52%), Gaps = 17/416 (4%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA L + EM  + + PD+  F + L +V     L  GK+IH +++++G  L  V + + L
Sbjct: 157 EASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIAL-DVFLKSAL 215

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +++Y KC  D+    K+F + T  D V   ++I+     G  + ALE FR +L   + P+
Sbjct: 216 IDIYFKC-RDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPN 274

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           + TL SV  AC+ L+    L LG+++H N L+ G +    + +A+M MYAK GR+D A  
Sbjct: 275 AVTLASVLPACAGLAT---LNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ 331

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F+   ++D V WN I+++ SQN K  EA+   RQM   G+  D VSI++ L AC++L  
Sbjct: 332 IFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPA 391

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK IH++ ++        F  SAL+DMY  C  +   R VFD + +K    WN++I 
Sbjct: 392 LHHGKAIHSFMIKG-AFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIA 450

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KL 415
            YG + + E +L LF KM E  G+ P+  T  +++ AC    A    +GI        + 
Sbjct: 451 AYGSHGHLEVSLALFHKMLE-DGIQPDHVTFLTILSAC--GHAGQVDKGIQYFRCMTEEY 507

Query: 416 GLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           G+         ++D++ R GR+ E  +TI +     D   W T++     C  HG+
Sbjct: 508 GIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGA---CRVHGN 560



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 22/218 (10%)

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           +G   D +V ++L+ +Y+  G IE ++ +FD M  +D V WN M+ G+  CG+   A+ +
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             +M+N +                  KPNSIT  +VL  C + +    G ++H   I   
Sbjct: 61  FEDMRNCQT-----------------KPNSITFASVLSICASEALSEFGNQLHGLVISCG 103

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
              D +V +ALV MY+K G L+ A ++F+ MP  NV+TWN +I  +  +G   E   L  
Sbjct: 104 FHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFS 163

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
            M++ G     V P+ +TF +   + + S  + +G ++
Sbjct: 164 EMISAG-----VSPDSITFASFLPSVTESASLKQGKEI 196


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/612 (40%), Positives = 355/612 (58%), Gaps = 64/612 (10%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           +IHA   R+  L  +  +   L   Y +   ++    +F    +  +  W A+I G+   
Sbjct: 48  QIHAVLFRHG-LDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              E+AL  + +M    G+ PNA T SS++  C         + +H  A+KLG   D YV
Sbjct: 107 GLHEQALNFYAQML-TQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYV 161

Query: 424 QNALMDMYSR-------------------------------MGRIEISKTIFDDMEVRDT 452
           +  L+D+Y+R                                G ++ ++ +FD ME RD 
Sbjct: 162 RTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 221

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V WN MI GYT  G   +AL+L R M                    + KPN +T+++VL 
Sbjct: 222 VCWNVMIDGYTQNGMPNEALVLFRRMLKA-----------------KAKPNEVTVLSVLS 264

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            CG L AL  G+ +H+Y   N +  +V VG+ALVDMY+KCG L  AR VFD +  ++V+ 
Sbjct: 265 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 324

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I+ Y MHG  QE L+L K+M   G     + P  +TFI + +AC HSG V+EG D+
Sbjct: 325 WNSMIVGYAMHGFSQEALQLFKSMCRMG-----LHPTNITFIGILSACGHSGWVTEGWDI 379

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F KMKD+YGIEP  +HY C+V+LLGRAG VE AY+L+  M  E D    W +LLGACR+H
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV-LWGTLLGACRLH 438

Query: 693 QNVEIGEIAAQNLFLLEPDVASH--YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
             + +GE   +   L++ ++A+   Y+LLSNIY++   WD    +R  MK+ GV+KEPGC
Sbjct: 439 GKIALGEKIVE--LLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGC 496

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S IE  +++H+FLAG  +H + ++++  LE ++  ++  GY P T  VLH++ E EKE  
Sbjct: 497 SSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERS 556

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG++NT PGTTI++ KNLRVC DCH+ TK ISKI  R+I++RD  RFHH
Sbjct: 557 LEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHH 616

Query: 871 FKNGTCSCGDYW 882
           F NG+CSCGDYW
Sbjct: 617 FVNGSCSCGDYW 628



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 188/401 (46%), Gaps = 38/401 (9%)

Query: 98  QIHAHVVKYGYGLSSVTVAN-TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           QIHA  V + +GL    + N  L   Y   G   + V  +F R        W ++I    
Sbjct: 48  QIHA--VLFRHGLDHHPILNFKLQRSYASLGRLDYSV-ALFGRTQNPSVFFWTAIIHGHA 104

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC------------------SNLSRRDG 198
             G  + AL  +  ML   VEP++FT  S+   C                  S+L  R G
Sbjct: 105 LRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTG 164

Query: 199 L-----RLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L     R G  V    L   + E +   + A++  YAK G +D A+ LF   E+RD V W
Sbjct: 165 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 224

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++   +QN    EA++  R+M     KP+ V++ SVL AC  L  L++G+ +H+Y   
Sbjct: 225 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 284

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I   N  VG+ALVDMY  C  +E  R VFD I DK +  WN+MI GY  + + +EAL 
Sbjct: 285 NGIQF-NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMD 429
           LF  M  + GL P   T   ++ AC  S    +   I  + +K   G +  +++   +++
Sbjct: 344 LFKSMCRM-GLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYGIEPKIEHYGCMVN 401

Query: 430 MYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
           +  R G +E +  +  +M +  D V W T++     C  HG
Sbjct: 402 LLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA---CRLHG 439



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 201/440 (45%), Gaps = 68/440 (15%)

Query: 204 QVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q+H    R G  +  I+N  L   YA LGR+D +  LF   ++  +  W  I+   +   
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----------- 311
              +A+ F  QM  +G++P+  + +S+L  C     ++ GK +H+ A++           
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163

Query: 312 ------------------NDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIAL 352
                              D + + S V  +A++  Y    E++  R +FD + ++    
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN MI GY QN    EAL+LF +M + A   PN  T+ SV+ AC +  A      +H + 
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLK-AKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
              G+  + +V  AL+DMYS+ G +E ++ +FD ++ +D V+WN+MI GY + G   +AL
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH----- 527
            L + M  M                    P +IT + +L  CG    + +G +I      
Sbjct: 343 QLFKSMCRMGLH-----------------PTNITFIGILSACGHSGWVTEGWDIFNKMKD 385

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE- 585
            Y I   +         +V++  + G +  A  +   M +  + + W  ++ A  +HG+ 
Sbjct: 386 EYGIEPKIEHY----GCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 441

Query: 586 --GQEVLELL--KNMVAEGS 601
             G++++ELL  +N+   G+
Sbjct: 442 ALGEKIVELLVDQNLANSGT 461



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 39/292 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A      +A+  Y +M    ++P+ F F ++LK    +  +  GK +H+  V
Sbjct: 96  WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAV 151

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--------------------SDMWDVYK--------- 135
           K G+  S + V   L+++Y + G                    + M   Y          
Sbjct: 152 KLGFD-SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 210

Query: 136 -VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            +FD + E+D V WN MI    + G  + AL  FR ML +  +P+  T++SV  AC  L 
Sbjct: 211 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 270

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  GR VH      G ++N  +  AL+ MY+K G ++DA+ +F   +D+D+V+WN+
Sbjct: 271 ---ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 327

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           ++   + +    EA+   + M   G+ P  ++   +L AC H   +  G +I
Sbjct: 328 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 379



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 17/274 (6%)

Query: 1   MASSAQCLTLLPSPPLSSLQT-----HQPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           + S+ Q    +P   L SL        +     A  +   G + R    W   +    ++
Sbjct: 175 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 234

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
               EA++ +  M ++  +P+     +VL A   +  L  G+ +H+++   G    +V V
Sbjct: 235 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF-NVHV 293

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              LV+MY KCGS + D   VFD+I +KD V+WNSMI      G    AL+ F+ M    
Sbjct: 294 GTALVDMYSKCGS-LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 352

Query: 176 VEPSSFTLVSVALACSN----LSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG 231
           + P++ T + +  AC +        D     +  +G   ++  +       ++ +  + G
Sbjct: 353 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY-----GCMVNLLGRAG 407

Query: 232 RVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKF 264
            V+ A  L K+   + D V W T++ +   + K 
Sbjct: 408 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 441


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/748 (36%), Positives = 397/748 (53%), Gaps = 84/748 (11%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL-ACSNLS 194
           +FD + E+D VSWN MI    R      A E F  M   +V   +  L   A   C + +
Sbjct: 112 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDA 171

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           RR   R+            E N    NAL++ Y +  ++++A  LF S E+  LVSWN +
Sbjct: 172 RRVFDRMP-----------EKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCL 220

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    +  K +EA  F   M +R    D VS  +++   +    +D  +++   +  +D+
Sbjct: 221 LGGFVKKKKIVEARQFFDSMKVR----DVVSWNTIITGYAQNGEIDEARQLFDESPVHDV 276

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                F  +A+V  Y   R VE  R +FD + ++    WNAM+ GY Q E  E A  LF 
Sbjct: 277 -----FTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF- 330

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
                            V+P                        R+    N ++  Y++ 
Sbjct: 331 ----------------DVMPC-----------------------RNVSTWNTMITGYAQC 351

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G+I  +K +FD M  RD VSW  MI GY+  G   +AL L   M+      NR+      
Sbjct: 352 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRS------ 405

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                      +  + L  C  + AL  GK++H   ++    T   VG+AL+ MY KCG 
Sbjct: 406 -----------SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A  +F  M  +++++WN +I  Y  HG G+E L   ++M  EG     +KP++ T +
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG-----LKPDDATMV 509

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A+ +ACSH+G+V +G   F+ M  DYG+ P+  HYAC+VDLLGRAG +E+A+ L+  MP 
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E D A  W +LLGA R+H N E+ E AA  +F +EP+ +  YVLLSN+Y+S+  W     
Sbjct: 570 EPD-AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 628

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R +M++ GV+K PG SWIE  ++ H F  GD  H + +++  FLE+L  RM+K GYV  
Sbjct: 629 LRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSK 688

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           TS VLH+V EEEKE ++  HSE+LA+A+GI+    G  IRV KNLRVC DCH A K+++K
Sbjct: 689 TSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAK 748

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  R IILRD  RFHHFK+G+CSCGDYW
Sbjct: 749 VTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 162/635 (25%), Positives = 270/635 (42%), Gaps = 87/635 (13%)

Query: 17  SSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAI-----------LSY 65
           SS  + Q     + + PLP S     + W  ++ S  R+ +  EA+           +SY
Sbjct: 34  SSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSY 93

Query: 66  IEMTRSDIQPDNFAFPAVLKAVAGIQDL-SLGKQIHAHVVKYGYGLS----------SVT 114
             M    ++   F    +L      +DL S    I  +V     G +           V 
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC 153

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
             NT+++ Y + G  + D  +VFDR+ EK+ VSWN++++   +  K + A      +L+ 
Sbjct: 154 SWNTILSGYAQNGC-VDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEAC-----VLFG 207

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE---WNTFIMNALMAMYAKLG 231
           + E  ++ LVS         ++  +   RQ   +S++V +   WNT I       YA+ G
Sbjct: 208 SRE--NWALVSWNCLLGGFVKKKKIVEARQFF-DSMKVRDVVSWNTIITG-----YAQNG 259

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            +D+A+ LF      D+ +W  +VS   QN    EA     +M  R    + VS  ++L 
Sbjct: 260 EIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLA 315

Query: 292 ACSHLEMLDTGKEIHAYALRNDIL-IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
                E ++  KE+       D++   N    + ++  Y  C ++   + +FD +  +  
Sbjct: 316 GYVQGERVEMAKELF------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 369

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W AMI GY Q+ +  EAL LF+ ME   G   N ++ SS +  C    A    + +HG
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGR-LNRSSFSSALSTCADVVALELGKQLHG 428

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K G     +V NAL+ MY + G IE +  +F +M  +D VSWNTMI GY+   +HG 
Sbjct: 429 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS---RHGF 485

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAY 529
               LR  ++M+ E                KP+  T++ VL  C     + KG++  H  
Sbjct: 486 GEEALRFFESMKREG--------------LKPDDATMVAVLSACSHTGLVDKGRQYFHTM 531

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG---- 584
                +  +    + +VD+  + G L  A  +   MP   +   W  ++ A  +HG    
Sbjct: 532 TQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 591

Query: 585 -------------EGQEVLELLKNMVAEGSRGGEV 606
                        E   +  LL N+ A   R G+V
Sbjct: 592 AETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 626


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 383/670 (57%), Gaps = 65/670 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F  NAL++ YAK G + + K  F     RD VS+NT ++  S N    E++   ++M 
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +P   +I S+L A + L  L  GK+IH   +  + L  N F+ +AL DMY  C E+
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFL-GNVFIWNALTDMYAKCGEI 206

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R +FD ++ K +  WN MI+GY +N   E+ + L  +M  ++G  P+  TMS+++ A
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMR-LSGHMPDQVTMSTIIAA 265

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                                              Y + GR++ ++ +F + + +D V W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             M+ GY   G+  DAL+L  EM              L E +   +P+S TL +V+  C 
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEM--------------LLEHI---EPDSYTLSSVVSSCA 333

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L++L  G+ +H  +I   L  +++V SAL+DMY+KCG ++ AR VF+LMP RNV++WN 
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+    +G  ++ LEL +NM+ +     + KP+ VTFI + +AC H   + +G + F  
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQ-----KFKPDNVTFIGILSACLHCNWIEQGQEYFDS 448

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQ 693
           + + +G+ P+ DHYAC+V+LLGR G++E A  LI  M   P+F     WS+LL  C    
Sbjct: 449 ITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDF---LIWSTLLSICSTKG 505

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           ++   E+AA++LF L+P +A  Y++LSN+Y+S   W     VR  MK   V+K  G SWI
Sbjct: 506 DIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWI 565

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E  +E+H+F + D +H +SE ++  L  L  ++++EG+ P+T+ VLH+V E+EK   +C 
Sbjct: 566 EIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICF 625

Query: 814 HSEKLAIAFGILNTPPGTT-IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
           HSEKLA+AFG++  P G + IR+ KN+R+CNDCH+  KF S+I  R+IILRD  RFHHF 
Sbjct: 626 HSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFS 685

Query: 873 NGTCSCGDYW 882
            G CSC D W
Sbjct: 686 TGKCSCNDNW 695



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 241/494 (48%), Gaps = 65/494 (13%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQD 92
           L    T   E++ + +    R+N+  +A      M     QP D+F    +L   A    
Sbjct: 14  LCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGK 73

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L   + +   ++K       +   N L++ Y K GS + ++   FDR+  +D VS+N+ I
Sbjct: 74  LRDAQNLFDKMLK-----RDIFSWNALLSAYAKSGS-IQNLKATFDRMPFRDSVSYNTTI 127

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-R 211
           A          +LE F+ M     EP+ +T+VS+  A + LS    LR G+Q+HG+ + R
Sbjct: 128 AGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLS---DLRYGKQIHGSIIVR 184

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
               N FI NAL  MYAK G ++ A+ LF     ++LVSWN ++S  ++N +  + +  L
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLL 244

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            QM L G  PD V++++++ A                                    YC 
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAA------------------------------------YCQ 268

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  V+  RRVF    +K I  W AM+ GY +N  +E+AL+LF +M  +  + P++ T+SS
Sbjct: 269 CGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEM-LLEHIEPDSYTLSS 327

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           VV +C +  +    + +HG +I  GL  +  V +AL+DMYS+ G I+ ++++F+ M  R+
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSWN MI G    G   DAL L    +NM ++K               KP+++T + +L
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELF---ENMLQQK--------------FKPDNVTFIGIL 430

Query: 512 PGCGALSALAKGKE 525
             C   + + +G+E
Sbjct: 431 SACLHCNWIEQGQE 444



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 35/278 (12%)

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           L RD +  NAL+  Y++ G I+  K  FD M  RD+VS+NT I G++      ++L L +
Sbjct: 85  LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNML 535
            MQ    E                 P   T++++L     LS L  GK+IH   I RN L
Sbjct: 145 RMQREGFE-----------------PTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFL 187

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V + +AL DMYAKCG +  AR +FD +  +N+++WN++I  Y  +G+ ++ + LL  
Sbjct: 188 G-NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M   G       P++VT   + AA    G V E   +F + K+        D       +
Sbjct: 247 MRLSGHM-----PDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-------KDIVCWTAMM 294

Query: 656 LGRA--GKVEDAYQLINMMPPEFDKAGAW--SSLLGAC 689
           +G A  G+ EDA  L N M  E  +  ++  SS++ +C
Sbjct: 295 VGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 30/244 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A++ +  +A+L + EM    I+PD++   +V+ + A +  L  G+ +H   +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G   +++ V++ L++MY KCG  + D   VF+ +  ++ VSWN+MI    + G    A
Sbjct: 350 LAGLN-NNLLVSSALIDMYSKCGF-IDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE------WNTF 218
           LE F  ML    +P + T + +  AC              +H N +  G+       N  
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSAC--------------LHCNWIEQGQEYFDSITNQH 453

Query: 219 IMNALMAMYA-------KLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            M   +  YA       + GR++ A  L K+   D D + W+T++S  S     + A + 
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVA 513

Query: 271 LRQM 274
            R +
Sbjct: 514 ARHL 517



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
           ML  D+   +AL+  YAK G +   +  FD MP R+ +++N  I  +  +   QE LEL 
Sbjct: 84  MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAA 619
           K M  EG      +P E T +++  A
Sbjct: 144 KRMQREG-----FEPTEYTIVSILNA 164


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/772 (36%), Positives = 405/772 (52%), Gaps = 93/772 (12%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  ++F  +  +   ++N+M+A     G+  LA   FR +   +    +  L ++A++ S
Sbjct: 56  DAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSS 115

Query: 192 ---------NLSRRDGLRLGRQV--HGNSLRVG----------EWNTFIMNALMAMYAKL 230
                     +  RD +     +  H N   V           E +    N ++A Y + 
Sbjct: 116 LADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRN 175

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           GRV++A+ LF S  + D++SWN ++S   Q  K  EA     +M  R +    + ++   
Sbjct: 176 GRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVS--- 232

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
                            YA R D+                    VE  RR+FD    + +
Sbjct: 233 ----------------GYARRGDM--------------------VE-ARRLFDAAPVRDV 255

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W A+++GY QN   EEA  +F  M E      NA + +++V A ++     + + +  
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAMPE-----RNAVSWNAMVAAYIQRRMMDEAKEL-- 308

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
               +   R+    N ++  Y++ G +E +K +FD M  +D VSW  M+  Y+  G   +
Sbjct: 309 --FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
            L L  EM    E  NR+                     VL  C  ++AL  G ++H   
Sbjct: 367 TLQLFIEMGRCGEWVNRS-----------------AFACVLSTCADIAALECGMQLHGRL 409

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           IR        VG+AL+ MY KCG +  AR  F+ M  R+V++WN +I  Y  HG G+E L
Sbjct: 410 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 469

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           E+   M     R    KP+++T + + AACSHSG+V +G+  FY M  D+G+   P+HY 
Sbjct: 470 EIFDMM-----RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 524

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C++DLLGRAG++ +A+ L+  MP E D    W +LLGA RIH+N E+G  AA+ +F LEP
Sbjct: 525 CMIDLLGRAGRLAEAHDLMKDMPFEPDST-MWGALLGASRIHRNPELGRSAAEKIFELEP 583

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           + A  YVLLSNIY+S+  W  A  +R  M+E GV+K PG SWIE  +++H F AGD  H 
Sbjct: 584 ENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHP 643

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           + E+++ FLE+L  RM+K GYV  T  VLH+V EEEKE +L  HSEKLA+A+GILN PPG
Sbjct: 644 EKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPG 703

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IRV KNLRVC DCH A K+IS IE R I+LRD  RFHHF+ G+CSCGDYW
Sbjct: 704 RPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 181/423 (42%), Gaps = 49/423 (11%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N  +  + + GRV DA+ LF +   R   ++N +++  S N +   A    R +     +
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----R 97

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  S  ++L A +    L   +      L +++ + +S   + ++  + N   V   R 
Sbjct: 98  PDNYSYNTLLHALAVSSSLADAR-----GLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            FD   +K    WN M+  Y +N   EEA  LF    E   +  NA  MS  V     SE
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNA-LMSGYVQWGKMSE 211

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + +         GRD    N ++  Y+R G +  ++ +FD   VRD  +W  +++
Sbjct: 212 ARELFDRMP--------GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY    Q+G           M EE  R  V+D       P+ N+++   ++        +
Sbjct: 264 GYA---QNG-----------MLEEARR--VFD-----AMPERNAVSWNAMVAAYIQRRMM 302

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            + KE+       M   +V   + ++  YA+ G L  A+ VFD MP ++ ++W  ++ AY
Sbjct: 303 DEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 358

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM-KDD 639
              G  +E L+L   M     R GE   N   F  + + C+    +  GM L  ++ +  
Sbjct: 359 SQGGCSEETLQLFIEM----GRCGEWV-NRSAFACVLSTCADIAALECGMQLHGRLIRAG 413

Query: 640 YGI 642
           YG+
Sbjct: 414 YGV 416



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 50/383 (13%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N L++ Y + G  M +  ++FDR+  +D VSWN M++   R G     +EA R+   + V
Sbjct: 197 NALMSGYVQWGK-MSEARELFDRMPGRDVVSWNIMVSGYARRGD---MVEARRLFDAAPV 252

Query: 177 -EPSSFTLVSVALACSNL---SRR--DGLRLGRQVHGNSL-------------------- 210
            +  ++T V    A + +   +RR  D +     V  N++                    
Sbjct: 253 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 211 ---RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
               V  WNT +       YA+ G +++AK +F +   +D VSW  ++++ SQ     E 
Sbjct: 313 PCRNVASWNTMLTG-----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +    +M   G   +  + A VL  C+ +  L+ G ++H   +R    +   FVG+AL+ 
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-GCFVGNALLA 426

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E  R  F+ + ++ +  WN MI GY ++ + +EAL +F  M   +   P+  
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTK-PDDI 485

Query: 388 TMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
           T+  V+ AC  S     ++GI       H   +    + Y    ++D+  R GR+  +  
Sbjct: 486 TLVGVLAACSHSGLV--EKGISYFYSMHHDFGVTAKPEHYT--CMIDLLGRAGRLAEAHD 541

Query: 443 IFDDMEVR-DTVSWNTMITGYTI 464
           +  DM    D+  W  ++    I
Sbjct: 542 LMKDMPFEPDSTMWGALLGASRI 564



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + ++     E +  +IEM R     +  AF  VL   A I  L  G Q+H  +
Sbjct: 350 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRL 409

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GYG+    V N L+ MY KCG +M D    F+ + E+D VSWN+MIA   R G    
Sbjct: 410 IRAGYGVGCF-VGNALLAMYFKCG-NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 467

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ALE F MM  ++ +P   TLV V  ACS+
Sbjct: 468 ALEIFDMMRTTSTKPDDITLVGVLAACSH 496



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 69/345 (20%)

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N  +  + R GR+  ++ +F  M  R T ++N M+ GY+  G+   A  L R +      
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI------ 95

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                          P+P++ +  T+L      S+LA  + +       M   D V  + 
Sbjct: 96  ---------------PRPDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNV 136

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           ++  +A  G ++ AR  FDL P ++ ++WN ++ AY  +G  +E         A G    
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE---------ARGLFNS 187

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKM------------------------KDDY 640
             + + +++ AL +     G +SE  +LF +M                        +  +
Sbjct: 188 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247

Query: 641 GIEPSPD--HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
              P  D   +  VV    + G +E+A ++ + MP     A +W++++ A    + ++  
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER--NAVSWNAMVAAYIQRRMMD-- 303

Query: 699 EIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
              A+ LF + P  +VAS   +L+  Y+ A + ++A  V   M +
Sbjct: 304 --EAKELFNMMPCRNVASWNTMLTG-YAQAGMLEEAKAVFDTMPQ 345


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/752 (34%), Positives = 417/752 (55%), Gaps = 42/752 (5%)

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +++ VSWNS+I+   + G +   +  F+    S++    FT  +    C    R   LRL
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG---RTLDLRL 59

Query: 202 GRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS--- 257
           GR +H      G     ++ N+L+ MY K GR+D A+ +F+S ++ D VSWN++++    
Sbjct: 60  GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC--SHLEMLDTGKEIHAYALRNDIL 315
           +  ND+ L     L +M   G+  +  ++ S L AC  +    ++ GK +H  A++  + 
Sbjct: 120 IGSNDEMLR---LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 176

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ-----NEYDEEAL 370
           +D   VG+AL+D Y    ++E   ++F  + D  + ++NAMI G+ Q     +E+  EA+
Sbjct: 177 LD-VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 235

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF +M+   G+ P+  T SS++ AC   EAF   + IH    K  L  D ++ NAL+++
Sbjct: 236 YLFFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 294

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           YS  G IE     F      D VSW ++I G+   GQ    L L  E+            
Sbjct: 295 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL------------ 342

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                     KP+  T+  +L  C  L+A+  G++IHAYAI+  +    ++ ++ + MYA
Sbjct: 343 -----LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG ++ A   F      ++++W+V+I +   HG  +E ++L + M     +G  + PN 
Sbjct: 398 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM-----KGSGIAPNH 452

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           +TF+ +  ACSH G+V EG+  F  MK D+GI P+  H AC+VDLLGRAG++ +A   I 
Sbjct: 453 ITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 512

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
               E D    W SLL ACR+H+  + G+  A+ +  LEP+ A+ YVLL NIY+ A +  
Sbjct: 513 DSGFEGDPV-MWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQM 571

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
            A ++R  MK+ GV+KEPG SWIE G+ +H F+AGD SH  S+ ++  LE + E ++K  
Sbjct: 572 PATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLD 631

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y+ +      +  + +  +++  HSEKLA+ FGI++ P    +RV KNLR C  CH+  K
Sbjct: 632 YIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMK 691

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             S++E+REIILRD  RFH F++G+CSCGDYW
Sbjct: 692 LFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/615 (28%), Positives = 292/615 (47%), Gaps = 45/615 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   + E +  + E   SD++ D F F   L       DL LG+ IHA +
Sbjct: 8   SWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALI 67

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G G   V + N+L++MY KCG   W    VF+   E D VSWNS+IA   R G  D 
Sbjct: 68  TVSGLG-GPVLLTNSLIDMYCKCGRIDW-ARLVFESADELDSVSWNSLIAGYVRIGSNDE 125

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALAC-SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            L     ML   +  +S+ L S   AC SN S    +  G+ +HG ++++G + +  +  
Sbjct: 126 MLRLLVKMLRHGLNLNSYALGSALKACGSNFS--SSIECGKMLHGCAVKLGLDLDVVVGT 183

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ----NDKFLEAVMFL-RQMAL 276
           AL+  YAK+G ++DA  +FK   D ++V +N +++   Q     D+F    M+L  +M  
Sbjct: 184 ALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 243

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           RG+KP   + +S+L ACS +E  + GK+IHA   + ++  D  F+G+ALV++Y     +E
Sbjct: 244 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE-FIGNALVELYSLSGSIE 302

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            G + F       +  W ++I G+ QN   E  L LF ++   +G  P+  T+S ++ AC
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL-LFSGRKPDEFTISIMLSAC 361

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    E IH +AIK G+G    +QN+ + MY++ G I+ +   F + +  D VSW+
Sbjct: 362 ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWS 421

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+      QHG A    +E  ++ E    + +           PN IT + VL  C  
Sbjct: 422 VMISSN---AQHGCA----KEAVDLFELMKGSGI----------APNHITFLGVLVACSH 464

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARR-VFDLMPVRNVITWN 574
              + +G        ++   T  V  SA +VD+  + G L  A   + D     + + W 
Sbjct: 465 GGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 524

Query: 575 VIIMAYGMH---GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            ++ A  +H     G+ V E +  +  E +          +++ L+   + +G+     +
Sbjct: 525 SLLSACRVHKATDTGKRVAERVIELEPEAA---------ASYVLLYNIYNDAGIQMPATE 575

Query: 632 LFYKMKDDYGIEPSP 646
           +   MKD  G++  P
Sbjct: 576 IRNLMKDR-GVKKEP 589



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 23/228 (10%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  R+ VSWN++I+GYT  G + + + L +E +          + DL       + +  T
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEAR----------MSDL-------RLDKFT 43

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
               L  CG    L  G+ IHA    + L   V++ ++L+DMY KCG +++AR VF+   
Sbjct: 44  FSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD 103

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
             + ++WN +I  Y   G   E+L LL  M+  G     +  N     +   AC  +   
Sbjct: 104 ELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG-----LNLNSYALGSALKACGSNFSS 158

Query: 627 S-EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           S E   + +      G++        ++D   + G +EDA ++  +MP
Sbjct: 159 SIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 206


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/697 (37%), Positives = 388/697 (55%), Gaps = 66/697 (9%)

Query: 204 QVHGNSLRVGEWN-TFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           Q+H  SL+   +N  F+ + L+A+Y+  K+  +  A+++F   + R L+ WNTI+    +
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N    + ++   ++    + PD  ++  V+  C+ L ++  GK+IH  AL+     D  F
Sbjct: 91  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD-VF 148

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V  +LV+MY  C E++C R+VFD + DK + LWN++I GY +    + AL LF +M E  
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE-- 206

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
                                                 RD +    L+D  S+ G++E +
Sbjct: 207 --------------------------------------RDAFSWTVLVDGLSKCGKVESA 228

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ-------NMEEEKNRNNVYDL 493
           + +FD M  R+ VSWN MI GY   G    AL L  +M        N+       N   +
Sbjct: 229 RKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 288

Query: 494 DETV-------LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
           D          L  +P+  TL++VL     L+ L KG+ IH+Y  +N    D ++G++L+
Sbjct: 289 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 348

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           +MYAKCGC+  A  VF  +  + V  W  II+  G+HG     L L   M   G     +
Sbjct: 349 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTG-----L 403

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           KPN + FI +  AC+H+G+V +G   F  M ++Y IEP+ +HY C+VD+L RAG +E+A 
Sbjct: 404 KPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAK 463

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
             I  MP   +K   W SLLG  R H  ++IGE AAQ +  + P+    Y+LLSN+Y+++
Sbjct: 464 NTIENMPISPNKV-IWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAAS 522

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
            +W+K   VR+ M + G RK+PGCS +E    +H+F+ GD SH Q+++++  +  + E++
Sbjct: 523 GMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKL 582

Query: 787 RKEGYVPDTSCVLHNV-NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           +  G+VPDT+ VL  +  E+EKE  L  HSE+LAIAFG++N  PG  IR+ KNLRVCNDC
Sbjct: 583 KCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDC 642

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H  TK +SKI SREII+RD  RFHHFKNG+CSC DYW
Sbjct: 643 HSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 206/412 (50%), Gaps = 24/412 (5%)

Query: 56  NQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           NQF  + I+ + E+    + PDNF  P V+K  A +  +  GKQIH   +K G+G S V 
Sbjct: 91  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG-SDVF 148

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V  +LVNMY KCG ++    KVFD + +KD V WNS+I    R G+ D+AL+ F  M   
Sbjct: 149 VQGSLVNMYSKCG-EIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM--- 204

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRV 233
             E  +F+   +    S   + +  R L  Q+   +L    WN     A++  Y K G  
Sbjct: 205 -PERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLV--SWN-----AMINGYMKSGDF 256

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           D A  LF      DLV+WN +++    N +F++AV     M   G +P   ++ SVL A 
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 316

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           S L +L  G+ IH+Y  +N   +D   +G++L++MY  C  +E    VF  I  KK+  W
Sbjct: 317 SGLAVLGKGRWIHSYMEKNGFELD-GILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 375

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE---GIHG 410
            A+I G G +     AL LF++M +  GL PNA     V+ AC  +    D      +  
Sbjct: 376 TAIIVGLGIHGMANHALALFLEMCK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
           +  K+    + Y    L+D+  R G +E +K   ++M +  + V W +++ G
Sbjct: 435 NEYKIEPTLEHY--GCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 484



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 196/392 (50%), Gaps = 38/392 (9%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG--RRVFDFISDKKIALWNAMITGY 360
           +++HA++L+  I  ++ FV S L+ +Y + +  + G  R +FD I  + +  WN +I  Y
Sbjct: 30  EQLHAFSLKTAIF-NHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 88

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            +N++  + ++LF   E V    P+  T+  V+  C R     + + IHG A+K+G G D
Sbjct: 89  VENQFSHDGIVLF--HELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 146

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +VQ +L++MYS+ G I+ ++ +FD M  +D V WN++I GY  CG+   AL L  EM  
Sbjct: 147 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE 206

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                             R   +   L+  L  CG + +  K           M   ++V
Sbjct: 207 ------------------RDAFSWTVLVDGLSKCGKVESARK-------LFDQMPCRNLV 241

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             +A+++ Y K G  + A  +F  MP+ +++TWN++I  Y ++G+  + +++   M+  G
Sbjct: 242 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 301

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
           SR     P+  T +++ +A S   ++ +G  +   M+ + G E        ++++  + G
Sbjct: 302 SR-----PSHATLVSVLSAVSGLAVLGKGRWIHSYMEKN-GFELDGILGTSLIEMYAKCG 355

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +E A  +   +  +  K G W++++    IH
Sbjct: 356 CIESALTVFRAIQKK--KVGHWTAIIVGLGIH 385



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 219/497 (44%), Gaps = 44/497 (8%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SDMWDVYKVFDRITEKDQVSWNSMIATL 155
           +Q+HA  +K     +   V++ L+ +Y     +D+     +FDRI  +  + WN++I   
Sbjct: 30  EQLHAFSLKTAI-FNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 88

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                    +  F  +++  + P +FTL  V   C+ L     ++ G+Q+HG +L++G  
Sbjct: 89  VENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGV---VQEGKQIHGLALKIGFG 144

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+  +L+ MY+K G +D A+ +F    D+D+V WN+++   ++  +   A+    +M
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM 204

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             R    D  S   ++   S       GK   A  L + +   N    +A+++ Y    +
Sbjct: 205 PER----DAFSWTVLVDGLS-----KCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGD 255

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            +    +F  +    +  WN MI GY  N    +A+ +F  M ++ G  P+  T+ SV+ 
Sbjct: 256 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKL-GSRPSHATLVSVLS 314

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A            IH +  K G   D  +  +L++MY++ G IE + T+F  ++ +    
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W  +I G  I G    AL L  EM                +T L  KPN+I  + VL  C
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMC---------------KTGL--KPNAIIFIGVLNAC 417

Query: 515 GALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
                +  G++     ++ Y I   L         LVD+  + G L  A+   + MP+  
Sbjct: 418 NHAGLVDDGRQYFDMMMNEYKIEPTLEHY----GCLVDILCRAGHLEEAKNTIENMPISP 473

Query: 569 NVITWNVIIMAYGMHGE 585
           N + W  ++     HG+
Sbjct: 474 NKVIWMSLLGGSRNHGK 490



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 5/150 (3%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           + QF +A+  +  M +   +P +    +VL AV+G+  L  G+ IH+++ K G+ L  + 
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGI- 342

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +  +L+ MY KCG  +     VF  I +K    W ++I  L   G  + AL  F  M  +
Sbjct: 343 LGTSLIEMYAKCGC-IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKT 401

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
            ++P++   + V  AC++    D    GRQ
Sbjct: 402 GLKPNAIIFIGVLNACNHAGLVDD---GRQ 428


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/692 (37%), Positives = 402/692 (58%), Gaps = 32/692 (4%)

Query: 198 GLRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
           GL   R++H   + R  + NTF+ N L+  Y+K G +  A+  F      +  SWN +++
Sbjct: 47  GLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMA 106

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           + +QN     A      M  +G++P+ V++++ L AC+    L  G++++       + I
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEI 166

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D S V S+L+ MY  CRE+E   R FD   +K +  W AMI+ Y  N     AL L  +M
Sbjct: 167 D-SHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRM 225

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR-YVQNALMDMYSRMG 435
           + + G+     T  S++ AC  +    +    H  A  +GL R    V   L+++Y + G
Sbjct: 226 D-LEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG 284

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
           R++ ++ + D M VR +VSW  MI  Y    Q+G+A   +   Q M+ E           
Sbjct: 285 RVDDARRVLDAMPVRTSVSWTAMIAAY---AQNGNAAEAINLFQCMDLEG---------- 331

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCG 553
                +P+ ITL++V+  C  L  L+ GK IHA  IR+    +  +++ +A++ MY KCG
Sbjct: 332 ----AEPSDITLISVVDSCAVLGTLSLGKRIHAR-IRSSPSFSQSLMLLNAVITMYGKCG 386

Query: 554 CLNFARRVFDLMPVR--NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            L  AR VF+ +P+R  +V+TW  +I AY  +G G+E +EL + M+ +G      +PN V
Sbjct: 387 NLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGG----TEPNRV 442

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+++  ACSH G + +  + F  M  D+G+ P+ DHY C+VDLLGRAG++ +A +L+ +
Sbjct: 443 TFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLL-L 501

Query: 672 MPPEFDK-AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
              +F+     W + L AC+++ ++E  + AA+ +  LEP+  +  VLLSN+Y++     
Sbjct: 502 RHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRA 561

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
               +R +MK  GV+K  G SWIE  + +H+F+  D SH +  +++  LE L   +++ G
Sbjct: 562 DVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAG 621

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           YVPDT  VL +V+EE+K  LL  HSE+LA+A GI++TPPGTT+RV KNLRVC+DCH ATK
Sbjct: 622 YVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATK 681

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           FIS+I  R+II+RD  RFHHFK+G CSCGDYW
Sbjct: 682 FISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 209/458 (45%), Gaps = 27/458 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++   R A   +  M    ++P+       L A    ++L+LG++++  +
Sbjct: 100 SWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELI 159

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                 + S  V ++L+ MYG+C  ++ +  + FDR  EKD V W +MI+      +   
Sbjct: 160 ASEALEIDS-HVESSLITMYGRC-REIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSR 217

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
           ALE  R M    ++    T VS+  AC++      LR G   H  +  +G    +T +  
Sbjct: 218 ALELVRRMDLEGIKLGLPTYVSLLDACASTM---DLRNGVAFHQRAAAIGLDRSSTVVAG 274

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+ +Y K GRVDDA+ +  +   R  VSW  ++++ +QN    EA+   + M L G +P
Sbjct: 275 TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEP 334

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             +++ SV+ +C+ L  L  GK IHA    +     +  + +A++ MY  C  +E  R V
Sbjct: 335 SDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREV 394

Query: 342 FDFI--SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           F+ +    + +  W AMI  Y QN   EEA+ LF +M    G  PN  T  SV+ AC   
Sbjct: 395 FECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCAC--- 451

Query: 400 EAFPDKEGIHGHAIKLG------LGRDRYVQNALMDMYSRMGRI-EISKTIF--DDMEVR 450
                 E    H   +G         D Y    L+D+  R GR+ E  K +    D E  
Sbjct: 452 SHLGQLEQAWEHFCSMGPDFGVPPAGDHYC--CLVDLLGRAGRLGEAEKLLLRHKDFEA- 508

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           D V W   I   + C  +GD     R  + + E +  N
Sbjct: 509 DVVCW---IAFLSACQMNGDLERSQRAAKRVSELEPEN 543



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 233/531 (43%), Gaps = 54/531 (10%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++HA +       ++  + N LV+ Y K GS +      F RIT  +  SWN ++A   
Sbjct: 52  RKLHAQIAARKLDRNTF-LGNVLVDAYSKHGS-LHGAQLAFGRITLHNAHSWNILMAAYA 109

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--- 213
           + G    A   F  M    V P++ TL +  LAC+       L LGR++  N L      
Sbjct: 110 QNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAAR---NLALGRKL--NELIASEAL 164

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E ++ + ++L+ MY +   +++A+  F    ++D+V W  ++S+ + N +   A+  +R+
Sbjct: 165 EIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRR 224

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L GIK    +  S+L AC+    L  G   H  A    +   ++ V   LV++Y  C 
Sbjct: 225 MDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG 284

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            V+  RRV D +  +    W AMI  Y QN    EA+ LF  M ++ G  P+  T+ SVV
Sbjct: 285 RVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCM-DLEGAEPSDITLISVV 343

Query: 394 PACVRSEAFPDKEGIHGHA-IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD--DMEVR 450
            +C         + IH          +   + NA++ MY + G +E+++ +F+   +  R
Sbjct: 344 DSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTR 403

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
             V+W  MI  Y   G   +A+ L +EM              +D      +PN +T ++V
Sbjct: 404 SVVTWTAMIRAYAQNGVGEEAIELFQEML-------------IDGGT---EPNRVTFLSV 447

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA------LVDMYAKCGCLNFARRVF-- 562
           L  C  L  L +  E         +  D  V  A      LVD+  + G L  A ++   
Sbjct: 448 LCACSHLGQLEQAWEHFCS-----MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLR 502

Query: 563 --DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
             D     +V+ W   + A  M+G+       L+       R  E++P  V
Sbjct: 503 HKDFEA--DVVCWIAFLSACQMNGD-------LERSQRAAKRVSELEPENV 544



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 27/238 (11%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
            R   SW   + + A++    EAI  +  M     +P +    +V+ + A +  LSLGK+
Sbjct: 298 VRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKR 357

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLC 156
           IHA +        S+ + N ++ MYGKCG ++    +VF+ +  + +  V+W +MI    
Sbjct: 358 IHARIRSSPSFSQSLMLLNAVITMYGKCG-NLELAREVFECVPLRTRSVVTWTAMIRAYA 416

Query: 157 RFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRD---------GLRLGRQVH 206
           + G  + A+E F+ ML     EP+  T +SV  ACS+L + +         G   G    
Sbjct: 417 QNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPA 476

Query: 207 GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLF---KSFEDRDLVSWNTIVSSLSQN 261
           G+              L+ +  + GR+ +A+ L    K FE  D+V W   +S+   N
Sbjct: 477 GDH----------YCCLVDLLGRAGRLGEAEKLLLRHKDFEA-DVVCWIAFLSACQMN 523


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 357/596 (59%), Gaps = 26/596 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+L +C   + ++ GK++HA   +  I   N  + + LV++YC C  +     +FD IS
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISF-NPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + + LWN MI GY  N   E A+ L+ +M +  GL P+  T   V+ AC    A  + +
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDY-GLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH   I+ GL  D +V  AL+DMY++ G +E ++ +FD ++ RD V WN+M+  Y+  G
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q  ++L L R M         N +          KP   T +  +        L +GKE+
Sbjct: 183 QPDESLALCRVMA-------FNGL----------KPTEGTFVISIAASADNGLLPQGKEL 225

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H Y+ R+   ++  V +AL+DMYAK G +N AR +F+L+  + V++WN +I  Y MHG  
Sbjct: 226 HGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHA 285

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            E L+L K M       G+V P+ +TF+ + AACSH G+++EG   F  M  D+ I P+ 
Sbjct: 286 NEALDLFKEM------KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTV 339

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
            HY C++DLLG  G++E+AY+LI  M  E D AG W +LL +C+IH NVE+GE+A + L 
Sbjct: 340 QHYTCMIDLLGHCGRLEEAYKLIMEMRVEPD-AGVWGALLHSCKIHGNVEMGELALEKLV 398

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEPD   +YV+LSN+Y+ A  WD    +R  M   G++K   CSWIE G+++H FL+ D
Sbjct: 399 ELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSED 458

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH +SE ++  L+   + M++ GY P    V H+V ++EK  ++  HSE+LAIAFG+++
Sbjct: 459 TSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLIS 518

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T  GT + + KNLR+C DCH A KFISKI  REI +RDV R+HHFK+G CSCGD+W
Sbjct: 519 TSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 214/415 (51%), Gaps = 13/415 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + ++L++    + +  GKQ+HA + + G   + + +A  LVN+Y  C S + + + +FDR
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPL-LATKLVNLYCICNS-LTNAHLLFDR 61

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I++++   WN MI      G ++LA+  +  M    + P  FT   V  ACS LS    +
Sbjct: 62  ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALS---AM 118

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+++H + +R G E + F+  AL+ MYAK G V+ A+ +F   ++RD+V WN+++++ 
Sbjct: 119 EEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATY 178

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           SQN +  E++   R MA  G+KP   +    + A +   +L  GKE+H Y+ R+     N
Sbjct: 179 SQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHG-FESN 237

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             V +AL+DMY     V   R +F+ + +K++  WNAMITGY  + +  EAL LF +M+ 
Sbjct: 238 DKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK- 296

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGR 436
              + P+  T   V+ AC       ++  +H  ++         VQ+   ++D+    GR
Sbjct: 297 -GKVLPDHITFVGVLAACSHG-GLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGR 354

Query: 437 IEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           +E +  +  +M V  D   W  ++    I G      + L ++  +E +   N V
Sbjct: 355 LEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYV 409



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 185/340 (54%), Gaps = 15/340 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +  +  AI  Y +M    + PD F FP VLKA + +  +  GK+IH  V+
Sbjct: 70  WNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVI 129

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G   S V V   L++MY KCG  +    +VFD+I E+D V WNSM+AT  + G+ D +
Sbjct: 130 RSGLE-SDVFVGAALIDMYAKCGC-VESARQVFDKIDERDVVCWNSMLATYSQNGQPDES 187

Query: 165 LEAFRMMLYSNVEPSSFTLV-SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           L   R+M ++ ++P+  T V S+A +  N      L  G+++HG S R G E N  +  A
Sbjct: 188 LALCRVMAFNGLKPTEGTFVISIAASADN----GLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           LM MYAK G V+ A++LF+  E++ +VSWN +++  + +    EA+   ++M  + + PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNC-REVECGRR 340
            ++   VL ACSH  +L+ GK +H  ++ +D  I  +    + ++D+  +C R  E  + 
Sbjct: 303 HITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 341 VFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
           + +   +    +W A++     +G  E  E AL   +++E
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELE 401


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 278/772 (36%), Positives = 404/772 (52%), Gaps = 93/772 (12%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  ++F  +  +   ++N+M+A     G+  LA   FR +   +    +  L ++A++ S
Sbjct: 56  DAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSS 115

Query: 192 ---------NLSRRDGLRLGRQV--HGNSLRVG----------EWNTFIMNALMAMYAKL 230
                     +  RD +     +  H N   V           E +    N ++A Y + 
Sbjct: 116 LADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRN 175

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           GRV++A+ LF S  + D +SWN ++S   Q  K  EA     +M  R +    + ++   
Sbjct: 176 GRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVS--- 232

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
                            YA R D+                    VE  RR+FD    + +
Sbjct: 233 ----------------GYARRGDM--------------------VE-ARRLFDAAPVRDV 255

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W A+++GY QN   EEA  +F  M E      NA + +++V A ++     + + +  
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAMPE-----RNAVSWNAMVAAYIQRRMMDEAKEL-- 308

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
               +   R+    N ++  Y++ G +E +K +FD M  +D VSW  M+  Y+  G   +
Sbjct: 309 --FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
            L L  EM    E  NR+                     VL  C  ++AL  G ++H   
Sbjct: 367 TLQLFIEMGRCGEWVNRS-----------------AFACVLSTCADIAALECGMQLHGRL 409

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           IR        VG+AL+ MY KCG +  AR  F+ M  R+V++WN +I  Y  HG G+E L
Sbjct: 410 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 469

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           E+   M     R    KP+++T + + AACSHSG+V +G+  FY M  D+G+   P+HY 
Sbjct: 470 EIFDMM-----RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 524

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C++DLLGRAG++ +A+ L+  MP E D    W +LLGA RIH+N E+G  AA+ +F LEP
Sbjct: 525 CMIDLLGRAGRLAEAHDLMKDMPFEPDST-MWGALLGASRIHRNPELGRSAAEKIFELEP 583

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           + A  YVLLSNIY+S+  W  A  +R  M+E GV+K PG SWIE  +++H F AGD  H 
Sbjct: 584 ENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHP 643

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           + E+++ FLE+L  RM+K GYV  T  VLH+V EEEKE +L  HSEKLA+A+GILN PPG
Sbjct: 644 EKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPG 703

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IRV KNLRVC DCH A K+IS IE R I+LRD  RFHHF+ G+CSCGDYW
Sbjct: 704 RPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 179/423 (42%), Gaps = 49/423 (11%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N  +  + + GRV DA+ LF +   R   ++N +++  S N +   A    R +     +
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----R 97

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  S  ++L A +    L   +      L +++ + +S   + ++  + N   V   R 
Sbjct: 98  PDNYSYNTLLHALAVSSSLADAR-----GLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            FD   +K    WN M+  Y +N   EEA  LF    E   +  NA  MS  V     SE
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNA-LMSGYVQWGKMSE 211

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + +         GRD    N ++  Y+R G +  ++ +FD   VRD  +W  +++
Sbjct: 212 ARELFDRMP--------GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY   G              M EE  R  V+D       P+ N+++   ++        +
Sbjct: 264 GYAQNG--------------MLEEARR--VFD-----AMPERNAVSWNAMVAAYIQRRMM 302

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            + KE+       M   +V   + ++  YA+ G L  A+ VFD MP ++ ++W  ++ AY
Sbjct: 303 DEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY 358

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM-KDD 639
              G  +E L+L   M     R GE   N   F  + + C+    +  GM L  ++ +  
Sbjct: 359 SQGGCSEETLQLFIEM----GRCGEWV-NRSAFACVLSTCADIAALECGMQLHGRLIRAG 413

Query: 640 YGI 642
           YG+
Sbjct: 414 YGV 416



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 170/383 (44%), Gaps = 50/383 (13%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N L++ Y + G  M +  ++FDR+  +D VSWN M++   R G     +EA R+   + V
Sbjct: 197 NALMSGYVQWGK-MSEARELFDRMPGRDVVSWNIMVSGYARRGD---MVEARRLFDAAPV 252

Query: 177 -EPSSFTLVSVALACSNL---SRR--DGLRLGRQVHGNSL-------------------- 210
            +  ++T V    A + +   +RR  D +     V  N++                    
Sbjct: 253 RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 211 ---RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
               V  WNT +       YA+ G +++AK +F +   +D VSW  ++++ SQ     E 
Sbjct: 313 PCRNVASWNTMLTG-----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +    +M   G   +  + A VL  C+ +  L+ G ++H   +R    +   FVG+AL+ 
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV-GCFVGNALLA 426

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E  R  F+ + ++ +  WN MI GY ++ + +EAL +F  M       P+  
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF-DMMRTTSTKPDDI 485

Query: 388 TMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
           T+  V+ AC  S     ++GI       H   +    + Y    ++D+  R GR+  +  
Sbjct: 486 TLVGVLAACSHSGLV--EKGISYFYSMHHDFGVTAKPEHYT--CMIDLLGRAGRLAEAHD 541

Query: 443 IFDDMEVR-DTVSWNTMITGYTI 464
           +  DM    D+  W  ++    I
Sbjct: 542 LMKDMPFEPDSTMWGALLGASRI 564



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + ++     E +  +IEM R     +  AF  VL   A I  L  G Q+H  +
Sbjct: 350 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRL 409

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GYG+    V N L+ MY KCG +M D    F+ + E+D VSWN+MIA   R G    
Sbjct: 410 IRAGYGVGCF-VGNALLAMYFKCG-NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 467

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ALE F MM  ++ +P   TLV V  ACS+
Sbjct: 468 ALEIFDMMRTTSTKPDDITLVGVLAACSH 496



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 145/345 (42%), Gaps = 69/345 (20%)

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N  +  + R GR+  ++ +F  M  R T ++N M+ GY+  G+   A  L R +      
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI------ 95

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                          P+P++ +  T+L      S+LA  + +       M   D V  + 
Sbjct: 96  ---------------PRPDNYSYNTLLHALAVSSSLADARGL----FDEMPVRDSVTYNV 136

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           ++  +A  G ++ AR  FDL P ++ ++WN ++ AY  +G  +E         A G    
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE---------ARGLFNS 187

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKM------------------------KDDY 640
             + + +++ AL +     G +SE  +LF +M                        +  +
Sbjct: 188 RTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247

Query: 641 GIEPSPD--HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
              P  D   +  VV    + G +E+A ++ + MP     A +W++++ A    + ++  
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER--NAVSWNAMVAAYIQRRMMD-- 303

Query: 699 EIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
              A+ LF + P  +VAS   +L+  Y+ A + ++A  V   M +
Sbjct: 304 --EAKELFNMMPCRNVASWNTMLTG-YAQAGMLEEAKAVFDTMPQ 345


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/670 (39%), Positives = 383/670 (57%), Gaps = 36/670 (5%)

Query: 223 LMAMYAKLGRVDDAKTLFKSF--------EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           L+ +Y+KLG +  A+TLF           +  +    NT++ + +   +  EA+     M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G+  +  +   VL  C+       G+ +H   +R     D  FV +ALVDMY  C E
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSD-LFVEAALVDMYAKCGE 182

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     VFD +  + +  W AMIT Y Q E   +ALMLF KM+E  G   +  T  SV  
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQE-EGFLGDEITAISVAS 241

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A  +         +HG+A+  G   D  V N+++ MY++ G +E ++ +FD ME R+ +S
Sbjct: 242 AVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGIS 301

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN+M++GYT  G+  DAL L  +MQ  E +                 PN +T + ++  C
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECD-----------------PNPVTALIMVSAC 344

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVIT 572
             L +   G+++H + I + +  D  + +A++DMY KCG L+ A  +F+   +  R+V +
Sbjct: 345 SYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSS 404

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WNV+I  YG+HG G+E LEL   M  EG     V+PN++TF ++ +ACSH+G++ EG   
Sbjct: 405 WNVLISGYGVHGHGKEALELFSRMQVEG-----VEPNDITFTSILSACSHAGLIDEGRKC 459

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M     + P   HYAC+VD+LGRAG + +A++LI  +P        W +LL ACRIH
Sbjct: 460 FADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE-VWGALLLACRIH 517

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            N E+GEIAA NLF LEP+   +YVL+SNIY+++  W +   VR+ MK  G++K    S 
Sbjct: 518 GNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 577

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IEFG E+H F   D S     +++  +E+L+  M+  GYVPD SCVLH+V  E+KE LL 
Sbjct: 578 IEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLN 637

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AFGI+    G  I+V KNLRVC+DCH A KFIS I  R+II+RD  RFHHF+
Sbjct: 638 YHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQ 697

Query: 873 NGTCSCGDYW 882
            G CSCGDYW
Sbjct: 698 GGRCSCGDYW 707



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 223/427 (52%), Gaps = 16/427 (3%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR+ A + +  EAI  YI M R  +  +NF +P VLK  A       G+ +H  VV+ G+
Sbjct: 104 LRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGF 163

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           G S + V   LV+MY KCG ++ D ++VFDR+  +D V W +MI    +  +   AL  F
Sbjct: 164 G-SDLFVEAALVDMYAKCG-EIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMY 227
           R M          T +SVA A   L   DG R+   VHG ++  G   +  + N+++ MY
Sbjct: 222 RKMQEEGFLGDEITAISVASAVGQLG--DG-RMAISVHGYAVLNGFIGDVSVGNSIVGMY 278

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK G V+ A+ +F   E+R+ +SWN+++S  +QN +  +A+    QM      P+ V+  
Sbjct: 279 AKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTAL 338

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--I 345
            ++ ACS+L     G+++H + + + + ID + + +A++DMY  C +++    +F+   +
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFVISSKMDIDTT-LRNAIMDMYMKCGDLDTAVEMFNNCEL 397

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            ++ ++ WN +I+GYG + + +EAL LF +M +V G+ PN  T +S++ AC  +    + 
Sbjct: 398 GERDVSSWNVLISGYGVHGHGKEALELFSRM-QVEGVEPNDITFTSILSACSHAGLIDEG 456

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR--DTVSWNTMITGYT 463
                   KL +  +      ++DM  R G +  +  +   +  R  D V W  ++    
Sbjct: 457 RKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLA-- 513

Query: 464 ICGQHGD 470
            C  HG+
Sbjct: 514 -CRIHGN 519



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 8/206 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ +  +A+  + +M  S+  P+      ++ A + +    LG+++H  V
Sbjct: 301 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 360

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKW 161
           +     + + T+ N +++MY KCG D+    ++F+   + E+D  SWN +I+     G  
Sbjct: 361 ISSKMDIDT-TLRNAIMDMYMKCG-DLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHG 418

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
             ALE F  M    VEP+  T  S+  ACS+    D    GR+   +  ++         
Sbjct: 419 KEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE---GRKCFADMTKLSVRPEMKHY 475

Query: 222 ALMA-MYAKLGRVDDAKTLFKSFEDR 246
           A M  M  + G +++A  L K    R
Sbjct: 476 ACMVDMLGRAGFLNEAFRLIKKIPSR 501


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 383/670 (57%), Gaps = 65/670 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F  NAL++ YAK G + + K  F     RD VS+NT ++  S N    E++   ++M 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +P   +I S+L A + L  L  GK+IH   +  + L  N F+ +AL DMY  C E+
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFL-GNVFIWNALTDMYAKCGEI 206

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R +FD ++ K +  WN MI+GY +N   E+ + L  +M  ++G  P+  TMS+++ A
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMR-LSGHMPDQVTMSTIIAA 265

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                                              Y + GR++ ++ +F + + +D V W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             M+ GY   G+  DAL+L  EM              L E +   +P+S TL +V+  C 
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEM--------------LLEHI---EPDSYTLSSVVSSCA 333

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L++L  G+ +H  +I   L  +++V SAL+DMY+KCG ++ AR VF+LMP RNV++WN 
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+    +G  ++ LEL +NM+ +     + KP+ VTFI + +AC H   + +G + F  
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQ-----KFKPDNVTFIGILSACLHCNWIEQGQEYFDS 448

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQ 693
           + + +G+ P+ DHYAC+V+LLGR G++E A  LI  M   P+F     WS+LL  C    
Sbjct: 449 ISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDF---LIWSTLLSICSTKG 505

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           ++   E+AA++LF L+P +A  Y++LSN+Y+S   W     VR  MK   V+K  G SWI
Sbjct: 506 DIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWI 565

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E  +E+H+F + D +H +SE ++  L  L  ++++EG+ P+T+ VLH+V E+EK   +C 
Sbjct: 566 EIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICF 625

Query: 814 HSEKLAIAFGILNTPPGTT-IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
           HSEKLA+AFG++  P G + IR+ KN+R+CNDCH+  KF S+I  R+IILRD  RFHHF 
Sbjct: 626 HSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFS 685

Query: 873 NGTCSCGDYW 882
            G CSC D W
Sbjct: 686 TGKCSCNDNW 695



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 239/494 (48%), Gaps = 65/494 (13%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQD 92
           L    T   E++ + +    R+N+  +A      M     QP D+F    +L   A    
Sbjct: 14  LCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGK 73

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L   + +   ++K           N L++ Y K GS + ++   FDR+  +D VS+N+ I
Sbjct: 74  LRDAQNLFDKMLK-----RDXFSWNALLSAYAKSGS-IQNLKATFDRMPFRDSVSYNTTI 127

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-R 211
           A          +LE F+ M     EP+ +T+VS+  A + L     LR G+Q+HG+ + R
Sbjct: 128 AGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLL---DLRYGKQIHGSIIVR 184

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
               N FI NAL  MYAK G ++ A+ LF     ++LVSWN ++S  ++N +  + +  L
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLL 244

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            QM L G  PD V++++++ A                                    YC 
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAA------------------------------------YCQ 268

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  V+  RRVF    +K I  W AM+ GY +N  +E+AL+LF +M  +  + P++ T+SS
Sbjct: 269 CGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEM-LLEHIEPDSYTLSS 327

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           VV +C +  +    + +HG +I  GL  +  V +AL+DMYS+ G I+ ++++F+ M  R+
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSWN MI G    G   DAL L    +NM ++K               KP+++T + +L
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELF---ENMLQQK--------------FKPDNVTFIGIL 430

Query: 512 PGCGALSALAKGKE 525
             C   + + +G+E
Sbjct: 431 SACLHCNWIEQGQE 444



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 35/278 (12%)

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           L RD +  NAL+  Y++ G I+  K  FD M  RD+VS+NT I G++      ++L L +
Sbjct: 85  LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNML 535
            MQ    E                 P   T++++L     L  L  GK+IH   I RN L
Sbjct: 145 RMQREGFE-----------------PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFL 187

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V + +AL DMYAKCG +  AR +FD +  +N+++WN++I  Y  +G+ ++ + LL  
Sbjct: 188 G-NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M   G       P++VT   + AA    G V E   +F + K+        D       +
Sbjct: 247 MRLSGHM-----PDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-------KDIVCWTAMM 294

Query: 656 LGRA--GKVEDAYQLINMMPPEFDKAGAW--SSLLGAC 689
           +G A  G+ EDA  L N M  E  +  ++  SS++ +C
Sbjct: 295 VGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 8/233 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A++ +  +A+L + EM    I+PD++   +V+ + A +  L  G+ +H   +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G   +++ V++ L++MY KCG  + D   VF+ +  ++ VSWN+MI    + G    A
Sbjct: 350 LAGLN-NNLLVSSALIDMYSKCGF-IDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNAL 223
           LE F  ML    +P + T + +  AC +    + +  G++   + S + G   T    A 
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHC---NWIEQGQEYFDSISNQHGMTPTLDHYAC 464

Query: 224 MA-MYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           M  +  + GR++ A  L K+   D D + W+T++S  S     + A +  R +
Sbjct: 465 MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHL 517



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
           ML  D    +AL+  YAK G +   +  FD MP R+ +++N  I  +  +   QE LEL 
Sbjct: 84  MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAA 619
           K M  EG      +P E T +++  A
Sbjct: 144 KRMQREG-----FEPTEYTIVSILNA 164


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/649 (38%), Positives = 376/649 (57%), Gaps = 26/649 (4%)

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN +++S ++ ++   A+    Q+     + D     SVL AC  +     GKEIH + L
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +  +  D  FVG+AL+ MY  C  VE  R VFD + ++ +  W+ MI    +N+  + AL
Sbjct: 152 KKGLDRD-VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV--QNALM 428
            L  +M     + P+   M S+V     +      + +H + I+        V    AL+
Sbjct: 211 ELIREMN-FMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALL 269

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------- 480
           DMY++ G + +++ +F+ +  +  VSW  MI G     +  +A  L    QN        
Sbjct: 270 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTA 329

Query: 481 -MEEEKNRN------NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
            +      N      N++D   T    +P  +T++++L  C    AL  GK +H+Y  + 
Sbjct: 330 MLSAYAQANCIDQAFNLFDQMRTS-GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            +  D ++ +ALVDMYAKCG +N A R+F     R++  WN II  + MHG G+E L++ 
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             M  +G     VKPN++TFI L  ACSH+G+V+EG  LF KM   +G+ P  +HY C+V
Sbjct: 449 AEMERQG-----VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 503

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLLGRAG +++A+++I  MP + +    W +L+ ACR+H+N ++GE+AA  L  +EP+  
Sbjct: 504 DLLGRAGLLDEAHEMIKSMPIKPNTI-VWGALVAACRLHKNPQLGELAATQLLEIEPENC 562

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
            + VL+SNIY++A  W  A  VRK MK +G++KEPG S IE    +H+FL GD SH Q  
Sbjct: 563 GYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIR 622

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           +++  L  +  ++ + GYVPDTS VL N++EEEKET L  HSEKLA+AFG+++T P T I
Sbjct: 623 RINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPI 682

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R+ KNLRVCNDCH ATK +SKI  R II+RD  RFHHF+ G CSCGDYW
Sbjct: 683 RIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 223/453 (49%), Gaps = 43/453 (9%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + S  + NQ R A+  Y ++ + D + DNF  P+VLKA   +    LGK+IH  V+
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G     V V N L+ MYG+C    +    VFD++ E+D VSW++MI +L R  ++D+A
Sbjct: 152 KKGLD-RDVFVGNALMLMYGECACVEY-ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 209

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG---EWNTFIMN 221
           LE  R M +  V PS   +VS+    ++ +    +R+G+ +H   +R             
Sbjct: 210 LELIREMNFMQVRPSEVAMVSMVNLFADTA---NMRMGKAMHAYVIRNSNNEHMGVPTTT 266

Query: 222 ALMAMYAKLG-------------------------------RVDDAKTLFKSFEDRDLVS 250
           AL+ MYAK G                               R+++A+ LF S ++RD++ 
Sbjct: 267 ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMI 326

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W  ++S+ +Q +   +A     QM   G++P  V+I S+L  C+    LD GK +H+Y  
Sbjct: 327 WTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYID 386

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +  + +D   + +ALVDMY  C ++    R+F     + I +WNA+ITG+  + Y EEAL
Sbjct: 387 KERVEVD-CILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 445

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMD 429
            +F +ME   G+ PN  T   ++ AC  +    + + +    +   GL         ++D
Sbjct: 446 DIFAEMER-QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 504

Query: 430 MYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
           +  R G ++ +  +   M ++ +T+ W  ++  
Sbjct: 505 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 242/551 (43%), Gaps = 81/551 (14%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P     P    +   +  L   KQIHAH++K  +  +     N   +             
Sbjct: 38  PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQ------ 91

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
                        WN +I +  +  +   AL  +  +   + E  +F   SV  AC  +S
Sbjct: 92  -------------WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVS 138

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
                +LG+++HG  L+ G + + F+ NALM MY +   V+ A+ +F    +RD+VSW+T
Sbjct: 139 ---WTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWST 195

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++ SLS+N +F  A+  +R+M    ++P  V++ S++   +    +  GK +HAY +RN 
Sbjct: 196 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 255

Query: 314 ILIDNSFVG----SALVDMYCNC-------------------------------REVECG 338
              +N  +G    +AL+DMY  C                                 +E  
Sbjct: 256 ---NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEA 312

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD   ++ + +W AM++ Y Q    ++A  LF +M   +G+ P   T+ S++  C  
Sbjct: 313 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM-RTSGVRPTKVTIVSLLSLCAV 371

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           + A    + +H +  K  +  D  +  AL+DMY++ G I  +  +F +   RD   WN +
Sbjct: 372 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 431

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ITG+ + G   +AL +  EM+       R  V          KPN IT + +L  C    
Sbjct: 432 ITGFAMHGYGEEALDIFAEME-------RQGV----------KPNDITFIGLLHACSHAG 474

Query: 519 ALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            + +GK++    +    L   +     +VD+  + G L+ A  +   MP++ N I W  +
Sbjct: 475 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 534

Query: 577 IMAYGMHGEGQ 587
           + A  +H   Q
Sbjct: 535 VAACRLHKNPQ 545



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 30/315 (9%)

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           A WN +IT Y +      AL ++ ++ ++     N     SV+ AC +       + IHG
Sbjct: 90  AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMA-PSVLKACGQVSWTQLGKEIHG 148

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K GL RD +V NALM MY     +E ++ +FD M  RD VSW+TMI   +   +   
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDM 208

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L+REM  M+                  +P+ + +++++      + +  GK +HAY 
Sbjct: 209 ALELIREMNFMQ-----------------VRPSEVAMVSMVNLFADTANMRMGKAMHAYV 251

Query: 531 IRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           IRN       V   +AL+DMYAKCG L  AR++F+ +  + V++W  +I         +E
Sbjct: 252 IRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEE 311

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
              L      + ++  +V    + + A+ +A + +  + +  +LF +M+   G+ P+   
Sbjct: 312 ARALF-----DSTQNRDV----MIWTAMLSAYAQANCIDQAFNLFDQMRTS-GVRPTKVT 361

Query: 649 YACVVDLLGRAGKVE 663
              ++ L   AG ++
Sbjct: 362 IVSLLSLCAVAGALD 376



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 44/310 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +RS +R+ +F  A+    EM    ++P   A  +++   A   ++ +GK +HA+V
Sbjct: 192 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 251

Query: 104 VKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK-- 160
           ++        V     L++MY KCG  +    ++F+ +T+K  VSW +MIA   R  +  
Sbjct: 252 IRNSNNEHMGVPTTTALLDMYAKCG-HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 310

Query: 161 ----------------W-------------DLALEAFRMMLYSNVEPSSFTLVSVALACS 191
                           W             D A   F  M  S V P+  T+VS+   C+
Sbjct: 311 EARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 370

Query: 192 NLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                  L LG+ VH   +  RV E +  +  AL+ MYAK G ++ A  LF     RD+ 
Sbjct: 371 VAG---ALDLGKWVHSYIDKERV-EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDIC 426

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE----- 304
            WN I++  + +    EA+    +M  +G+KP+ ++   +L ACSH  ++  GK+     
Sbjct: 427 MWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 486

Query: 305 IHAYALRNDI 314
           +H + L   I
Sbjct: 487 VHTFGLVPQI 496



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 32/297 (10%)

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
           +  WN +IT YT   Q  +AL +  +++ M+        +++D   + P        +VL
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMD--------FEVD-NFMAP--------SVL 131

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             CG +S    GKEIH + ++  L  DV VG+AL+ MY +C C+ +AR VFD M  R+V+
Sbjct: 132 KACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVV 191

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W+ +I +   + E    LEL++ M        +V+P+EV  +++    + +  +  G  
Sbjct: 192 SWSTMIRSLSRNKEFDMALELIREM-----NFMQVRPSEVAMVSMVNLFADTANMRMGKA 246

Query: 632 LF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
           +  Y +++             ++D+  + G +  A QL N +  +     +W++++  C 
Sbjct: 247 MHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK--TVVSWTAMIAGCI 304

Query: 691 IHQNVEIGEIAAQNLF--LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
               +E     A+ LF      DV     +LS  Y+ A   D+A ++  +M+  GVR
Sbjct: 305 RSNRLE----EARALFDSTQNRDVMIWTAMLS-AYAQANCIDQAFNLFDQMRTSGVR 356



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 8/224 (3%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           +Q R    W   L + A++N   +A   + +M  S ++P      ++L   A    L LG
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K +H+++ K    +  + +   LV+MY KCG D+    ++F     +D   WN++I    
Sbjct: 379 KWVHSYIDKERVEVDCI-LNTALVDMYAKCG-DINAAGRLFIEAISRDICMWNAIITGFA 436

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRL-GRQVHGNSLRVGE 214
             G  + AL+ F  M    V+P+  T + +  ACS+     +G +L  + VH   L V +
Sbjct: 437 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL-VPQ 495

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
              +    ++ +  + G +D+A  + KS   + + + W  +V++
Sbjct: 496 IEHY--GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/700 (35%), Positives = 394/700 (56%), Gaps = 58/700 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM- 274
           N F  NAL++  A    + D + LF S   RD+VS+N +++  S      +AV     + 
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 275 -ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN-- 331
            A   ++P  +++++++ A S L     GK+ H   LR      N+FVGS LVDMY    
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLG-FGANAFVGSPLVDMYAKMS 189

Query: 332 -----------------------------CREVECGRRVFDFISDKKIALWNAMITGYGQ 362
                                        C+ VE  RR+F+ ++D+    W  M+TG+ Q
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N  + EAL +F +M    G+  +  T  S++ AC    A    + IH + I+     + +
Sbjct: 250 NGLESEALEIFRRMR-FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVF 308

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+DMYS+   I++++T+F  M  ++ +SW  +I GY   G   +A+ +  EMQ   
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQ--- 365

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
               R+ +           P+  TL +V+  C  L++L +G + H  A+ + L   + V 
Sbjct: 366 ----RDGI----------DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +ALV +Y KCG +  A R+FD M   + ++W  ++  Y   G  +E ++L + M+A+G  
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKG-- 469

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              VKP+ VTFI + +ACS +G V +G   F+ M+ D+GI P  DHY C++DL  R+GK+
Sbjct: 470 ---VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL 526

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A + I  MP   D  G W +LL ACR+  ++EIG+ AA+NL  ++P   + YVLL ++
Sbjct: 527 KEAEEFIKQMPMHPDAIG-WGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSM 585

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +++   W++   +R+ M++  V+KEPGCSWI++ +++H F A D SH  S+ ++  LE L
Sbjct: 586 HAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWL 645

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           + +M +EGY PD S VLH+V + +K  ++  HSEKLAIAFG++  P    IR+ KNLRVC
Sbjct: 646 NSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVC 705

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH ATKFISKI  R+I++RD  RFH F +G CSCGD+W
Sbjct: 706 VDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 219/450 (48%), Gaps = 52/450 (11%)

Query: 60  EAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           +A+  Y+ + ++D  ++P       ++ A + + D +LGKQ H  +++ G+G ++  V +
Sbjct: 121 QAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAF-VGS 179

Query: 118 TLVNMYGKCGSDMWDVYKVFDRI-------------------------------TEKDQV 146
            LV+MY K  S + D  + FD +                               T++D +
Sbjct: 180 PLVDMYAKM-SLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSI 238

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           +W +M+    + G    ALE FR M +  +    +T  S+  AC  LS    L  G+Q+H
Sbjct: 239 TWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS---ALEQGKQIH 295

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              +R   + N F+ +AL+ MY+K   +  A+T+F+    ++++SW  ++    QN    
Sbjct: 296 AYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSE 355

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EAV    +M   GI PD  ++ SV+ +C++L  L+ G + H  AL +  L+    V +AL
Sbjct: 356 EAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSG-LMHYITVSNAL 414

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           V +Y  C  +E   R+FD +S      W A+++GY Q    +E + LF KM    G+ P+
Sbjct: 415 VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM-LAKGVKPD 473

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISK 441
             T   V+ AC R+  F +K   + H+++   G     D Y    ++D+YSR G+++ ++
Sbjct: 474 GVTFIGVLSACSRA-GFVEKGRSYFHSMQKDHGIVPIDDHY--TCMIDLYSRSGKLKEAE 530

Query: 442 TIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
                M +  D + W T+++    C   GD
Sbjct: 531 EFIKQMPMHPDAIGWGTLLSA---CRLRGD 557



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK   SW   +    ++    EA+  + EM R  I PD++   +V+ + A +  L  G Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ 394

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H   +  G  +  +TV+N LV +YGKCGS + D +++FD ++  DQVSW ++++   +F
Sbjct: 395 FHCLALVSGL-MHYITVSNALVTLYGKCGS-IEDAHRLFDEMSFHDQVSWTALVSGYAQF 452

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G+    ++ F  ML   V+P   T + V  ACS                           
Sbjct: 453 GRAKETIDLFEKMLAKGVKPDGVTFIGVLSACS--------------------------- 485

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVS----WNTIVSSLSQNDKFLEAVMFLRQ 273
                     + G V+  ++ F S + D  +V     +  ++   S++ K  EA  F++Q
Sbjct: 486 ----------RAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQ 535

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           M +    PD +   ++L AC     L    EI  +A  N + ID
Sbjct: 536 MPMH---PDAIGWGTLLSACR----LRGDMEIGKWAAENLLEID 572


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 285/846 (33%), Positives = 447/846 (52%), Gaps = 41/846 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    EA+  Y  M R  I  +  AF  V+     ++D   G Q+ +HV
Sbjct: 112 SWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G     V+VAN+L++M G  G  + D  K+F R+ E+D VSWN++++     G    
Sbjct: 172 IVSGLQ-RQVSVANSLISMLGNLGR-VHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSK 229

Query: 164 ALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMN 221
           +   F  M    +    + TL S+   C++    D +  G  VH   LR G  +   ++N
Sbjct: 230 SFRVFSDMRRGGLLRHDATTLCSLISVCAS---SDYVSYGSGVHSLCLRTGLHSYIPVVN 286

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY+  G++ DA+ LF +   RDL+SWNT++SS  QN   ++A+  L Q+      P
Sbjct: 287 ALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGP 346

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D ++ +S L ACS    L  G+ +HA  L+   L  N  VG++L+ MY  C  +E   R+
Sbjct: 347 DRMTFSSALGACSSPGALMDGRMVHAMTLQLS-LHHNLLVGNSLITMYGKCNSIEDAERI 405

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----- 396
           F  + +  +   N +I  Y   E   +A+ +F  M     +  N  T+ +++ +      
Sbjct: 406 FQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRR-GEVKLNYITIVNILGSFTSSND 464

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
           +R+   P    +H + I  G   D YV N+L+ MY++ G +E S  +F  +  R  VSWN
Sbjct: 465 LRNYGLP----LHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWN 520

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI       QHG     L+   +M  + N      LD          I L   +    +
Sbjct: 521 AMIAANV---QHGHGEESLKLFMDMRHDGN-----GLDH---------ICLAECMSSSAS 563

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L++L +G ++H   ++  L  D  V +A +DMY KCG ++   ++     +R    WN +
Sbjct: 564 LASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTL 623

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  +G  +E  E  K+M++ G       P+ VTF+ L +ACSH+G+V +G+D +  M
Sbjct: 624 ISGYARYGYFKEAEETFKHMISVGR-----TPDYVTFVTLLSACSHAGLVDKGIDYYNSM 678

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              +G+ P   H  C+VD+LGR G+  +A + I  MP        W SLL + R H+N++
Sbjct: 679 SSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPV-LPNDLIWRSLLSSSRTHKNLD 737

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           IG  AA+ L  L+P   S YVLLSN+Y+++  W     VR  MK + + K P CSW++  
Sbjct: 738 IGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQK 797

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
            E+  F  GD SH+ +++++  L+ +  ++R+ GYV DTS  LH+ +EE+KE  L  HSE
Sbjct: 798 KEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSE 857

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+A+G++  P G T+R+ KNLRVC DCH   K +S +  REI+LRD  RFHHFK G+C
Sbjct: 858 KLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSC 917

Query: 877 SCGDYW 882
           SC D+W
Sbjct: 918 SCSDFW 923



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 234/478 (48%), Gaps = 26/478 (5%)

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SW + I+   R G+   A    R M    V  S F L S+  AC      +G   G  +H
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERW--EEGRACGAAIH 67

Query: 207 GNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             + + G   N +I  AL+ +Y     V DA+ LF    +R++VSW  ++ +LS N    
Sbjct: 68  ALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLE 127

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+ + R+M    I  +  + A+V+  C  LE    G ++ ++ + + +    S V ++L
Sbjct: 128 EALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVS-VANSL 186

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           + M  N   V    ++F  + ++    WNA+++ Y       ++  +F  M     L  +
Sbjct: 187 ISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHD 246

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           ATT+ S++  C  S+      G+H   ++ GL     V NAL++MYS  G++  ++ +F 
Sbjct: 247 ATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFW 306

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           +M  RD +SWNTMI+ Y   G + DAL  L ++ +  E                  P+ +
Sbjct: 307 NMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNE-----------------GPDRM 349

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  + L  C +  AL  G+ +HA  ++  L  +++VG++L+ MY KC  +  A R+F LM
Sbjct: 350 TFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLM 409

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
           P  +V++ N++I +Y +  +G + +++   M     R GEVK N +T + +  + + S
Sbjct: 410 PNHDVVSCNILIGSYAVLEDGTKAMQVFFWM-----RRGEVKLNYITIVNILGSFTSS 462



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 28/239 (11%)

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-ITLM 508
           R   SW T I+G   CG+   A  +LR M+                   R  P S   L 
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRE------------------RGVPLSGFALA 47

Query: 509 TVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++  C       A G  IHA   +  L  +V +G+AL+ +Y     +  A+R+F  MP 
Sbjct: 48  SLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPE 107

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           RNV++W  +++A   +G  +E L   + M  E      +  N   F  + + C       
Sbjct: 108 RNVVSWTALMVALSSNGHLEEALGYYRRMRRE-----RIACNANAFATVVSLCGSLEDEV 162

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            G+ +F  +    G++        ++ +LG  G+V DA +L   M  E D   +W++L+
Sbjct: 163 AGLQVFSHVIVS-GLQRQVSVANSLISMLGNLGRVHDAEKLFYRM-EERDTV-SWNALV 218


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/764 (36%), Positives = 426/764 (55%), Gaps = 35/764 (4%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAV 87
           +SLP   +      +W+  +R    +   R A+L Y++M    S  +PD    P V+K+ 
Sbjct: 100 SSLPRAAAAAALPWNWL--IRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSC 157

Query: 88  AGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS 147
           A +  L LG+ +H      G     + V + L+ MY   G  +    +VFD + E+D V 
Sbjct: 158 AALGALHLGRLVHRTTRALGLD-RDMYVGSALIKMYADAGL-LDGAREVFDGMDERDCVL 215

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN M+    + G    A+  FR+M  S  +P+  TL      C+       L  G Q+H 
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAA---EADLLSGVQLHT 272

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            +++ G E    + N L++MYAK   +++A  LF      DLV+WN ++S   QN    +
Sbjct: 273 LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDD 332

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           A+     M   G++PD V++AS+LPA + L     GKEIH Y +RN   +D  F+ SALV
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVD-VFLVSALV 391

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           D+Y  CR+V   + VFD      + + + MI+GY  N   E A+ +F  +  + G+ PNA
Sbjct: 392 DIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLAL-GIKPNA 450

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
             ++S +PAC    A    + +HG+ +K       YV++ALMDMYS+ GR+++S  +F  
Sbjct: 451 VMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSK 510

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  +D V+WN+MI+ +   G+  +AL L R+M              + E V   K N++T
Sbjct: 511 MSAKDEVTWNSMISSFAQNGEPEEALDLFRQM--------------IMEGV---KYNNVT 553

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           + ++L  C  L A+  GKEIH   I+  +  D+   SAL+DMY KCG L  A RVF+ MP
Sbjct: 554 ISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMP 613

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            +N ++WN II AYG HG  +E ++LL  M  EG      K + VTF+AL +AC+H+G V
Sbjct: 614 EKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEG-----FKADHVTFLALISACAHAGQV 668

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            EG+ LF  M ++Y IEP  +H +C+VDL  RAGK++ A Q I  MP + D AG W +LL
Sbjct: 669 QEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPD-AGIWGALL 727

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
            ACR+H+NVE+ EIA+Q LF L+P    +YVL+SNI + A  WD    +R+ MK+  V+K
Sbjct: 728 HACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQK 787

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
            PG SW++  +  H F+A D +H  SE+++  L++L   +++EG
Sbjct: 788 IPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEG 831


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/669 (37%), Positives = 382/669 (57%), Gaps = 27/669 (4%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+ N L+ +Y K  R DDA  +F   + +++ SW  ++++ ++N  F    +F R M 
Sbjct: 9   NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGML 68

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           L+GI P  V I+  L AC+    +  G+ I    L   I  + S V +ALV +Y      
Sbjct: 69  LQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIE-EESIVQTALVSLYGKLGHC 127

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
                VF  +S + +  W+AM+  Y +N +  EAL LF +M+ + G+ PN  T+ S + A
Sbjct: 128 TDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMD-LDGVAPNKVTLVSGLDA 186

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C           +H      G+     V  AL+++Y + GRIE +   F  +  ++ V+W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           + +   Y    ++ DA+ +L  M             DL+       PNS T ++VL  C 
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRM-------------DLEGLA----PNSTTFVSVLDACA 289

Query: 516 ALSALAKGKEIHA--YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           A++AL +G+ IH   + +   L +DV V +ALV+MY+KCG L  A  +FD +   +++ W
Sbjct: 290 AIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLW 349

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I     HG+ ++ LEL + M  EG     ++P  +TF ++  ACSH+GM+ +G   F
Sbjct: 350 NSLIATNAQHGQTEKALELFERMRLEG-----LQPTIITFTSVLFACSHAGMLDQGRKHF 404

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
                D+GI P  +H+ C+VDLLGRAG + D+  L+  MP E     AW + LGACR ++
Sbjct: 405 VSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPV-AWMAFLGACRTYR 463

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N++    AA+NLF L+P   + YVLLSN+Y+ A  W     +R+ M+     KE G SWI
Sbjct: 464 NMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWI 523

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E  D +H+F++GD  H +  ++H  L+ L++ M+  GYVPDT  VLH+V +E KET++  
Sbjct: 524 EVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGY 583

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLA+AF +L TP G+ IRV KNLRVCNDCH A+KFISK+ +REI++RD  RFH F+N
Sbjct: 584 HSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQN 643

Query: 874 GTCSCGDYW 882
           G CSCGDYW
Sbjct: 644 GACSCGDYW 652



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 197/414 (47%), Gaps = 26/414 (6%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + N L+++Y KC     D   VF  I  K+  SW  M+A       +D     FR ML  
Sbjct: 12  LCNLLIDLYTKC-DRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            + P    +     AC++      + +GR +    L  G E  + +  AL+++Y KLG  
Sbjct: 71  GINPGEVGISIFLSACTDARE---ITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            DA ++F     RD+V+W+ +V++ ++N    EA+   RQM L G+ P+ V++ S L AC
Sbjct: 128 TDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC 187

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + L  L +G  +H       I      VG+ALV++Y  C  +E     F  I +K +  W
Sbjct: 188 ASLGDLRSGALMHQRVEAQGIQ-SGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG--H 411
           +A+   Y +N+ + +A+ +  +M ++ GL PN+TT  SV+ AC    A      IH   H
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRM-DLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIH 305

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            +  GL  D YV  AL++MYS+ G + ++  +FD +   D V WN++I      GQ   A
Sbjct: 306 VLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKA 365

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           L L   M+                 +   +P  IT  +VL  C     L +G++
Sbjct: 366 LELFERMR-----------------LEGLQPTIITFTSVLFACSHAGMLDQGRK 402



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 31/395 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q++   SW   L + A +  F    L +  M    I P        L A    +++++
Sbjct: 35  GIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITI 94

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ I   ++  G    S+ V   LV++YGK G    D   VF R++ +D V+W++M+A  
Sbjct: 95  GRSIQLAILGTGIEEESI-VQTALVSLYGKLGHCT-DAASVFLRMSHRDVVAWSAMVAAY 152

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGE 214
            R G    AL  FR M    V P+  TLVS   AC++L   R G  + ++V    ++ G 
Sbjct: 153 ARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSG- 211

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
               +  AL+ +Y K GR++ A   F    ++++V+W+ I ++ ++ND+  +A+  L +M
Sbjct: 212 --VVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRM 269

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIH------AYALRNDILIDNSFVGSALVDM 328
            L G+ P+  +  SVL AC+ +  L  G+ IH         L +D+     +V +ALV+M
Sbjct: 270 DLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDV-----YVLTALVNM 324

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  +     +FD I+   + LWN++I    Q+   E+AL LF +M  + GL P   T
Sbjct: 325 YSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM-RLEGLQPTIIT 383

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            +SV+ AC              HA  L  GR  +V
Sbjct: 384 FTSVLFAC-------------SHAGMLDQGRKHFV 405



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 36/387 (9%)

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           I N F+ + L+D+Y  C   +    VF  I  K +  W  M+  + +N  D +   LF +
Sbjct: 7   IRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENR-DFDRCWLFFR 65

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
              + G+ P    +S  + AC  +        I    +  G+  +  VQ AL+ +Y ++G
Sbjct: 66  GMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLG 125

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
               + ++F  M  RD V+W+ M+  Y   G   +AL L R+M             DLD 
Sbjct: 126 HCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM-------------DLDG 172

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                 PN +TL++ L  C +L  L  G  +H       + + VVVG+ALV++Y KCG +
Sbjct: 173 VA----PNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRI 228

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A   F  +  +NV+ W+ I  AY  +   ++ + +L  M  EG     + PN  TF++
Sbjct: 229 EAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG-----LAPNSTTFVS 283

Query: 616 LFAACSHSGMVSEGMDLFYKMKD-DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +  AC+    + +G  +  ++     G+E        +V++  + G +  A  +      
Sbjct: 284 VLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNM------ 337

Query: 675 EFDKAG-----AWSSLLGACRIHQNVE 696
            FDK        W+SL+     H   E
Sbjct: 338 -FDKIAHLDLVLWNSLIATNAQHGQTE 363


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 356/595 (59%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           + + AC   + L  G+++HA+ ++        ++ + L+ +Y  C  ++  R V D + +
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYR-PPVYLATRLIILYVRCGALDDARNVLDGMPE 104

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W AMI+GY Q+    EAL LFI+M   AG   N  T+++V+ +C   ++    E 
Sbjct: 105 RNVVSWTAMISGYSQSGRHAEALELFIRMLR-AGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   +K       +V ++L+DMY + G I+ ++ +FD +  RDTVS   +I+GY   G 
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL L R++ +   +                  N +T  T+L     L++L  GK++H
Sbjct: 224 DDEALDLFRQLYSSGMQ-----------------CNYVTFTTLLTSLSGLASLNYGKQVH 266

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              +R  L   +V+ ++L+DMY+KCG L ++RRVFD MP R+ I+WN ++M YG HG GQ
Sbjct: 267 GLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQ 326

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           EV++L + M  E      VKP+ VT +A+ + CSH G+V EG+D+F  +  +        
Sbjct: 327 EVVQLFRTMTEE------VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIG 380

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY CV+DLLGR+G+++ A  LI  MP E   A  W SLLGACR+H NV +GE+ AQ L  
Sbjct: 381 HYGCVIDLLGRSGQLQKALDLIEHMPFEPTPA-IWGSLLGACRVHINVSVGEVVAQKLLD 439

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           +EP  A +YV+LSNIY++A +W     VRK M E  V KEP  SWI     IH F + + 
Sbjct: 440 MEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSER 499

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
            H + + ++  ++ +   ++  G+VPD SCVLH+V++E+KE +L GHSEKLAI FG++NT
Sbjct: 500 FHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNT 559

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPG TI+V KNLR+C DCH   KF+SK+  REI LRD  RFH  K+G C+CGDYW
Sbjct: 560 PPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 173/323 (53%), Gaps = 19/323 (5%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A + A    Q L  G+Q+HAH+VK  Y    V +A  L+ +Y +CG+ + D   V D 
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYR-PPVYLATRLIILYVRCGA-LDDARNVLDG 101

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + E++ VSW +MI+   + G+   ALE F  ML +  + + FTL +V  +C        +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCP---VHQSI 158

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           +   QVH   ++   E + F+ ++L+ MY K G + +A+ +F    +RD VS   I+S  
Sbjct: 159 QQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGY 218

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND----I 314
           +Q     EA+   RQ+   G++ + V+  ++L + S L  L+ GK++H   LR +    I
Sbjct: 219 AQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFI 278

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           ++ NS     L+DMY  C ++   RRVFD +  +    WNAM+ GYG++   +E + LF 
Sbjct: 279 VLQNS-----LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFR 333

Query: 375 KM-EEVAGLWPNATTMSSVVPAC 396
            M EEV    P++ T+ +V+  C
Sbjct: 334 TMTEEVK---PDSVTLLAVLSGC 353



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 153/301 (50%), Gaps = 24/301 (7%)

Query: 22  HQPPATTATSL---------------PLPGSQTRCKESWIESLRSEARSNQFREAILSYI 66
           ++PP   AT L                L G   R   SW   +   ++S +  EA+  +I
Sbjct: 72  YRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFI 131

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
            M R+  + + F    VL +    Q +   +Q+H+ VVK  +  S + V ++L++MYGK 
Sbjct: 132 RMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFE-SHMFVGSSLLDMYGKS 190

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G ++ +  KVFD + E+D VS  ++I+   + G  D AL+ FR +  S ++ +  T  ++
Sbjct: 191 G-NIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTL 249

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFE 244
             + S L+    L  G+QVHG  LR  E   FI+  N+L+ MY+K G++  ++ +F +  
Sbjct: 250 LTSLSGLA---SLNYGKQVHGLILR-KELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMP 305

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            R  +SWN ++    ++    E V   R M    +KPD V++ +VL  CSH  ++D G +
Sbjct: 306 QRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLD 364

Query: 305 I 305
           I
Sbjct: 365 I 365


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/711 (35%), Positives = 415/711 (58%), Gaps = 35/711 (4%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           A + A + +++L LGK IH  +V  G   +++T+  +L+N+Y  C   ++   K+  +  
Sbjct: 201 ARVTAGSALEEL-LGKLIHQKIVSLGLQ-NNITLCKSLINLYFSC--HLFQSAKLVFQTI 256

Query: 142 EK--DQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           E   D   WN ++A   +   +   LE F R++ +  ++P +FT  SV  ACS L R   
Sbjct: 257 ENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR--- 313

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           +  G+ VH + ++ G   +  +M++ + MYAK    +DA  LF    +RD+ SWN ++S 
Sbjct: 314 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 373

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             Q+ +  +A+    +M + G KPD V++ +V+ +C+ L  L+ GKEIH   +R+   +D
Sbjct: 374 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALD 433

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             FV SALVDMY  C  +E  + VF+ I  K +  WN+MI GY      +  + LF +M+
Sbjct: 434 G-FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 492

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E  G+ P  TT+SS++ AC RS      + IHG+ I+  +  D +V ++L+D+Y + G I
Sbjct: 493 E-EGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++ +F +M   + VSWN MI+GY   G + +AL++  +M+                  
Sbjct: 552 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA---------------- 595

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KP++IT  +VLP C  L+ L KGKEIH + I + L  + VV  AL+DMYAKCG ++ 
Sbjct: 596 -GVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 654

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  +F+ +P R+ ++W  +I AYG HG+  E L+L + M     +  + KP++VTF+A+ 
Sbjct: 655 ALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM-----QQSDAKPDKVTFLAIL 709

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACSH+G+V EG   F +M  +YG +P+ +HY+C++DLLGR G++ +AY+++   P   +
Sbjct: 710 SACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRE 769

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
             G  S+L  AC +H+ +++GE   + L   +PD  S Y++LSN+Y+S + WD+   VR 
Sbjct: 770 DVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRL 829

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           K+KE+G++K PGCSWIE G  IH F+  D SH Q++ ++  +  L+  + K
Sbjct: 830 KIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 880



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 161/500 (32%), Positives = 258/500 (51%), Gaps = 34/500 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD F +P+VLKA +G+  +  GK +H HV+K G+ +  V V ++ V MY KC     D
Sbjct: 294 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM-DVVVMSSAVGMYAKCNV-FED 351

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             K+FD + E+D  SWN++I+   + G+ + ALE F  M  S  +P S TL +V  +C+ 
Sbjct: 352 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 411

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L     L  G+++H   +R G   + F+ +AL+ MY K G ++ AK +F+  + +++VSW
Sbjct: 412 LL---DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW 468

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N++++  S        +   R+M   GI+P   +++S+L ACS    L  GK IH Y +R
Sbjct: 469 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 528

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N +  D  FV S+L+D+Y  C  +     VF  +    +  WN MI+GY +     EAL+
Sbjct: 529 NRVEAD-IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 587

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M + AG+ P+A T +SV+PAC +       + IH   I+  L  +  V  AL+DMY
Sbjct: 588 IFTDMRK-AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMY 646

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G ++ +  IF+ +  RD VSW +MI  Y   GQ  +AL L  +MQ  +         
Sbjct: 647 AKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSD--------- 697

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-----TDVVVGSALV 546
                    KP+ +T + +L  C     + +G     Y    M+A       V   S L+
Sbjct: 698 --------AKPDKVTFLAILSACSHAGLVDEG----CYYFNQMIAEYGFKPAVEHYSCLI 745

Query: 547 DMYAKCGCLNFARRVFDLMP 566
           D+  + G L  A  +    P
Sbjct: 746 DLLGRVGRLREAYEILQRTP 765



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 229/429 (53%), Gaps = 14/429 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +  Q  +A+  + EM  S  +PD+     V+ + A + DL  GK+IH  +
Sbjct: 366 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 425

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+ L    V++ LV+MYGKCG  +    +VF++I  K+ VSWNSMIA     G    
Sbjct: 426 VRSGFALDGF-VSSALVDMYGKCGC-LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 483

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +E FR M    + P+  TL S+ +AC   SR   L+LG+ +HG  +R   E + F+ ++
Sbjct: 484 CIELFRRMDEEGIRPTLTTLSSILMAC---SRSVNLQLGKFIHGYIIRNRVEADIFVNSS 540

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G +  A+ +F++    ++VSWN ++S   +   +LEA++    M   G+KPD
Sbjct: 541 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 600

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++  SVLPACS L +L+ GKEIH + + + + I N  V  AL+DMY  C  V+    +F
Sbjct: 601 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI-NEVVMGALLDMYAKCGAVDEALHIF 659

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + ++    W +MI  YG +    EAL LF KM++ +   P+  T  +++ AC  +   
Sbjct: 660 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQ-SDAKPDKVTFLAILSACSHA-GL 717

Query: 403 PDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMI 459
            D+   + + +    G    V++   L+D+  R+GR+  +  I     ++R+ V    + 
Sbjct: 718 VDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV--GLLS 775

Query: 460 TGYTICGQH 468
           T ++ C  H
Sbjct: 776 TLFSACHLH 784


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/640 (40%), Positives = 371/640 (57%), Gaps = 30/640 (4%)

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+LVSW  ++S LSQN KF EA+     M + G  P   + +S + AC+ L  ++ GK++
Sbjct: 4   RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H  AL+  I     FVGS L DMY  C  +    +VF+ +  K    W AMI GY +   
Sbjct: 64  HCLALKFGIG-SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 366 DEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            EEAL+ F KM  EEV     +   + S + AC   +A      +H   +KLG   D +V
Sbjct: 123 FEEALLAFKKMIDEEVT---IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 424 QNALMDMYSRMGRIEISKTIFD-DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            NAL DMYS+ G +E +  +F  D E R+ VS+  +I GY    Q    L +  E++   
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR--- 236

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
               R  +          +PN  T  +++  C   +AL +G ++HA  ++     D  V 
Sbjct: 237 ----RQGI----------EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 282

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           S LVDMY KCG L  A + FD +     I WN ++  +G HG G++ +++ + MV  G  
Sbjct: 283 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG-- 340

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              VKPN +TFI+L   CSH+G+V EG+D FY M   YG+ P  +HY+CV+DLLGRAG++
Sbjct: 341 ---VKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 397

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A + IN MP E +  G W S LGACRIH + E+G++AA+ L  LEP  +   VLLSNI
Sbjct: 398 KEAKEFINRMPFEPNAFG-WCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNI 456

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y++ + W+    VR +M++  V+K PG SW++ G + H F A D SH +   ++  L+ L
Sbjct: 457 YANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTL 516

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            ++++  GYVP T  V  ++++  KE LL  HSE++A+AF +++ P G  I V KNLRVC
Sbjct: 517 LDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVC 576

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A KFISK+  R+II+RD  RFHHF +G+CSCGDYW
Sbjct: 577 VDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 239/450 (53%), Gaps = 27/450 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++++F EAI ++  M      P  FAF + ++A A +  + +GKQ+H   
Sbjct: 8   SWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLA 67

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G G S + V + L +MY KCG+ M+D  KVF+ +  KD+VSW +MI    + G+++ 
Sbjct: 68  LKFGIG-SELFVGSNLEDMYSKCGA-MFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 125

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL AF+ M+   V      L S   AC  L      + GR VH + +++G E + F+ NA
Sbjct: 126 ALLAFKKMIDEEVTIDQHVLCSTLGACGALK---ACKFGRSVHSSVVKLGFESDIFVGNA 182

Query: 223 LMAMYAKLGRVDDAKTLFK-SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           L  MY+K G ++ A  +F    E R++VS+  ++    + ++  + +    ++  +GI+P
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  + +S++ AC++   L+ G ++HA  ++ +   ++ FV S LVDMY  C  +E   + 
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEQAIQA 301

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I D     WN++++ +GQ+   ++A+ +F +M +  G+ PNA T  S++  C  S A
Sbjct: 302 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-RGVKPNAITFISLLTGC--SHA 358

Query: 402 FPDKEGI---HGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
              +EG+   +      G+  G + Y  + ++D+  R GR++ +K   + M    +   W
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHY--SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEK 485
            + +     C  HGD     +EM  +  EK
Sbjct: 417 CSFLGA---CRIHGD-----KEMGKLAAEK 438



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 224/458 (48%), Gaps = 38/458 (8%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + +++ VSW +MI+ L +  K+  A+  F  M      P+ F   S   AC++L     +
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG---SI 57

Query: 200 RLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            +G+Q+H  +L+ G  +  F+ + L  MY+K G + DA  +F+    +D VSW  ++   
Sbjct: 58  EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 117

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S+  +F EA++  ++M    +  D   + S L AC  L+    G+ +H+  ++     D 
Sbjct: 118 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD- 176

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKME 377
            FVG+AL DMY    ++E    VF   S+ + +  +  +I GY + E  E+ L +F+++ 
Sbjct: 177 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G+ PN  T SS++ AC    A      +H   +K+    D +V + L+DMY + G +
Sbjct: 237 R-QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLL 295

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLD 494
           E +   FD++     ++WN++++ +   GQHG   DA+ +   M              +D
Sbjct: 296 EQAIQAFDEIGDPTEIAWNSLVSVF---GQHGLGKDAIKIFERM--------------VD 338

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALVDMYA 550
             V   KPN+IT +++L GC     + +G + + Y++       VV G    S ++D+  
Sbjct: 339 RGV---KPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTYG--VVPGEEHYSCVIDLLG 392

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           + G L  A+   + MP   N   W   + A  +HG+ +
Sbjct: 393 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 9/266 (3%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK+  SW   +   ++  +F EA+L++ +M   ++  D     + L A   ++    G+ 
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 163

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCR 157
           +H+ VVK G+  S + V N L +MY K G DM     VF   +E ++ VS+  +I     
Sbjct: 164 VHSSVVKLGFE-SDIFVGNALTDMYSKAG-DMESASNVFGIDSECRNVVSYTCLIDGYVE 221

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
             + +  L  F  +    +EP+ FT  S+  AC+N   +  L  G Q+H   +++  + +
Sbjct: 222 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN---QAALEQGTQLHAQVMKINFDED 278

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ + L+ MY K G ++ A   F    D   ++WN++VS   Q+    +A+    +M  
Sbjct: 279 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 338

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
           RG+KP+ ++  S+L  CSH  +++ G
Sbjct: 339 RGVKPNAITFISLLTGCSHAGLVEEG 364



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 70/328 (21%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  R+ VSW  MI+G +   +  +A+     M+                 +    P    
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMR-----------------ICGEVPTQFA 43

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             + +  C +L ++  GK++H  A++  + +++ VGS L DMY+KCG +  A +VF+ MP
Sbjct: 44  FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS----- 621
            ++ ++W  +I  Y   GE +E L   K M+ E     EV  ++    +   AC      
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE-----EVTIDQHVLCSTLGACGALKAC 158

Query: 622 ------HSGMVSEGM-----------DLFYKMKD------DYGIEPSPDH---YACVVDL 655
                 HS +V  G            D++ K  D       +GI+    +   Y C++D 
Sbjct: 159 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 218

Query: 656 LGRAGKVEDAYQLI------NMMPPEFDKAGAWSSLLGACRIHQNVEIG-EIAAQNL--- 705
                ++E    +        + P EF     +SSL+ AC     +E G ++ AQ +   
Sbjct: 219 YVETEQIEKGLSVFVELRRQGIEPNEF----TFSSLIKACANQAALEQGTQLHAQVMKIN 274

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAM 733
           F  +P V+S   +L ++Y    L ++A+
Sbjct: 275 FDEDPFVSS---ILVDMYGKCGLLEQAI 299


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/748 (35%), Positives = 407/748 (54%), Gaps = 83/748 (11%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVF+++ ++D +SWN M++   + G    A   F  M   +V       VS     S  +
Sbjct: 112 KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV-------VSWNAMLSGFA 164

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           +   +   R++    L     N    N L++ Y + GR++DA+ LF S  D ++VSWN +
Sbjct: 165 QNGFVEEARKIFDQMLVK---NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    +  +  +A     +M +R    D +S   ++   +   +L   +      L  ++
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARR-----LFEEL 272

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            I + F  +A+V  +     ++   R+F+ + +K    WNAMI GY Q++  E+A  LF 
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M       P+  T S                                  N ++  Y++ 
Sbjct: 333 QM-------PSRNTSS---------------------------------WNTMVTGYAQC 352

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G I+ +K +FD+M  RD +SW  MI+GY   GQ  +AL L  +M+              D
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR-------------D 399

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +L    N   L   L  C  ++AL  GK++H   ++    T  + G+AL+ MY KCG 
Sbjct: 400 GGIL----NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A  VF+ +  +++++WN +I  Y  HG G+E L L ++M         +KP++VT +
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT------IKPDDVTLV 509

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +ACSH+G+V +GM+ F  M  +YGI  +  HY C++DLLGRAG++++A  L+  MP 
Sbjct: 510 GVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF 569

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
            +  A  W +LLGA RIH + E+GE AA+ +F +EPD +  YVLLSN+Y+++  W +  +
Sbjct: 570 -YPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R KM++ GV+K PG SW+E  ++ H F  GD SH ++E+++ +LE L   ++K+G+V  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  VLH+V EEEKE +L  HSEKLA+AFGIL+ PPG  IRV KNLRVC DCH A K ISK
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I  R+II+RD  RFHHF  G+CSCGDYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 250/557 (44%), Gaps = 63/557 (11%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y K G ++     +F+++ EKD VSWN+M++   + G  + A + F  ML  N 
Sbjct: 126 NVMLSGYVKNG-NLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
           E S   L+S  +    +         R++  + +   +W     N LM  Y +  R+DDA
Sbjct: 184 EISWNGLLSAYVQNGRIED------ARRLFDSKM---DWEIVSWNCLMGGYVRKKRLDDA 234

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---------------GIKP 281
           ++LF     RD +SWN +++  +QN    EA     ++ +R               G+  
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294

Query: 282 DGVSIASVLPACSHLE-------MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           +   I   +P  + +         + + +   A  L + +   N+   + +V  Y  C  
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++  + +FD +  +    W AMI+GY Q+   EEAL LFIKM+   G+  N + ++  + 
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALS 413

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +C    A    + +HG  +K G        NAL+ MY + G IE +  +F+D+  +D VS
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS 473

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WNTMI GY   G   +AL L   M+                  +  KP+ +TL+ VL  C
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMK------------------MTIKPDDVTLVGVLSAC 515

Query: 515 GALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
                + KG E      +N  +  +    + ++D+  + G L+ A  +   MP   +  T
Sbjct: 516 SHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMD 631
           W  ++ A  +HG+ +     L    AE  +  E++P N   ++ L    + SG   E  +
Sbjct: 576 WGALLGASRIHGDTE-----LGEKAAE--KVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 632 LFYKMKDDYGIEPSPDH 648
           +  KM+D  G++  P +
Sbjct: 629 MRSKMRDK-GVKKVPGY 644



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 183/435 (42%), Gaps = 38/435 (8%)

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           D D+V WN  +S+  +  +   A+     M  R        I+  L         D  ++
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN----NKFDCARK 112

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +       D++  N      ++  Y     +   R +F+ + +K +  WNAM++G+ QN 
Sbjct: 113 VFEKMPDRDLISWN-----VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           + EEA  +F +M     L  N  + + ++ A V++    D   +    +   +       
Sbjct: 168 FVEEARKIFDQM-----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEI----VSW 218

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM------ 478
           N LM  Y R  R++ ++++FD M VRD +SWN MITGY   G   +A  L  E+      
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 479 --QNMEEEKNRNNVYDLDETVLR--PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
               M     +N + D    +    P+ N ++   ++ G      + K +E+       M
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL----FDQM 334

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
            + +    + +V  YA+CG ++ A+ +FD MP R+ I+W  +I  Y   G+ +E L L  
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  +G        N        ++C+    +  G  L  ++    G +        ++ 
Sbjct: 395 KMKRDGG-----ILNRSALACALSSCAEIAALELGKQLHGRLV-KAGFQTGYIAGNALLA 448

Query: 655 LLGRAGKVEDAYQLI 669
           + G+ G +E+A+ + 
Sbjct: 449 MYGKCGSIEEAFDVF 463



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 111/219 (50%), Gaps = 13/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S Q  EA+  +I+M R     +  A    L + A I  L LGKQ+H  +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR--FGKW 161
           VK G+    +   N L+ MYGKCGS + + + VF+ ITEKD VSWN+MIA   R  FGK 
Sbjct: 432 VKAGFQTGYIA-GNALLAMYGKCGS-IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489

Query: 162 DLAL-EAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFI 219
            LAL E+ +M     ++P   TLV V  ACS+    D G+     ++ N       N   
Sbjct: 490 ALALFESMKM----TIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA--NAKH 543

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
              ++ +  + GR+D+A  L KS     D  +W  ++ +
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 374/630 (59%), Gaps = 26/630 (4%)

Query: 254 IVSSLSQNDKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           ++S   +N  F +++     M L  G + D  ++ +VLPA + L+ L  G +I   A++ 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
                 S + + L+ ++  C EVE  R +F  I  K +   NAMI+G+  N   E+++ L
Sbjct: 61  GFYSHVSLL-TGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRL 119

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F ++   +G   +++T+  ++P             IHG  +KLG+     V  AL  +Y 
Sbjct: 120 FKELLS-SGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R+  +  ++ +FD+   +   SWN MI+G T  G    A+ L + MQ       +NNV  
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQ-------KNNV-- 229

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                    PN +T+ ++L  C  + AL+ G+ +H+    N   ++V V +AL+DMYAKC
Sbjct: 230 --------NPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKC 281

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +  AR +FDLMP +N +TWN +I  YG+HG GQE L+L  +M++       VKP  +T
Sbjct: 282 GSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSS-----SVKPTGLT 336

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F+++  ACSH+G+V EG  +F+ M  D+G EP  +HYAC+VD+LGRAG+++ A + I  M
Sbjct: 337 FLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAM 396

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E      W +LLGAC IH++  +  +A++ LF L+P+   +YVL+SNIYS  + + +A
Sbjct: 397 PVE-PGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQA 455

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             VR+  K+  + K PGC+ IE G   H F +GD SH QS+ ++  L+ L+ +M + G+ 
Sbjct: 456 ASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQ 515

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
            +T+ VLH++ EEEKE  +  HSEKLAIAFG+++T PG  IR+ KNLRVC DCH  TKF+
Sbjct: 516 TETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFL 575

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           SKI  R I++RD  RFHHFK+G CSCGDYW
Sbjct: 576 SKITKRVIVVRDANRFHHFKDGLCSCGDYW 605



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 192/372 (51%), Gaps = 11/372 (2%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           AVL AVA +Q+L LG QI    +K G+  S V++   L++++ KCG ++     +F  I 
Sbjct: 36  AVLPAVAELQELKLGMQILCLAIKCGF-YSHVSLLTGLISLFSKCG-EVEIARLLFGEIR 93

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +KD +S N+MI+     G+ + ++  F+ +L S    SS T+V +    S         L
Sbjct: 94  KKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHS---YL 150

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
              +HG  +++G   ++ +  AL  +Y +L  +  A+ LF    ++ L SWN ++S  +Q
Sbjct: 151 CNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQ 210

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N     A+   + M    + P+ V++ S+L AC+ +  L  G+ +H+  ++++    N +
Sbjct: 211 NGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSL-IKSNRFESNVY 269

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V +AL+DMY  C  +   R +FD + +K    WNAMI+GYG + + +EAL LF  M   +
Sbjct: 270 VSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLS-S 328

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIE 438
            + P   T  SV+ AC  +    + +GI  H +    G +   ++   ++D+  R G+++
Sbjct: 329 SVKPTGLTFLSVLYACSHAGLVKEGDGIF-HTMVHDFGFEPLAEHYACMVDILGRAGQLK 387

Query: 439 ISKTIFDDMEVR 450
            +      M V 
Sbjct: 388 KALEFIKAMPVE 399



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 88/150 (58%), Gaps = 4/150 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIE-MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  ++ S    N   +A +S  + M ++++ P+     ++L A A I  LSLG+ +H+ 
Sbjct: 200 SW-NAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHS- 257

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           ++K     S+V V+  L++MY KCGS +    ++FD + EK++V+WN+MI+     G   
Sbjct: 258 LIKSNRFESNVYVSTALIDMYAKCGS-ITVARELFDLMPEKNEVTWNAMISGYGLHGHGQ 316

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            AL+ F  ML S+V+P+  T +SV  ACS+
Sbjct: 317 EALKLFYDMLSSSVKPTGLTFLSVLYACSH 346


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/686 (36%), Positives = 379/686 (55%), Gaps = 26/686 (3%)

Query: 200 RLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGR  H  +LR+     + FI   L+ +Y+KL     A     S     +VS+   +S 
Sbjct: 32  RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILI 316
            +Q+ + L A+     M   G++P+  +  S   A +      T G +IH+ A+R   L 
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            + FV  A +DMY     ++  R +F  + ++ +  WNA++T    +    E +  +  +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            E  GL PN  +  +   AC  +      E  HG  +K G   D  V N+++D Y +   
Sbjct: 212 REAGGL-PNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRC 270

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
              ++ +FD M VR++VSW +M+  Y   G   +A       +   EE            
Sbjct: 271 AGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE------------ 318

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P    + + L  C  L  L  G+ +HA A+R+ +  ++ V SALVDMY KCGC+ 
Sbjct: 319 -----PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVE 373

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A ++F   P RN++TWN +I  Y   G+ Q  L +  +M+    R GE  PN +T + +
Sbjct: 374 DAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMI----RSGETAPNYITLVNV 429

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             +CS  G+  +G +LF  M++ +GIEP  +HYACVVDLLGRAG  E AY++I  MP   
Sbjct: 430 ITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR- 488

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
                W +LLGAC++H   E+G IAA+ LF L+P  + ++VLLSN+++SA  W +A D+R
Sbjct: 489 PSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIR 548

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           K+MK +G++K+PGCSW+ + + +H F A D  H+   ++   L  L ++M+  GY+PDT 
Sbjct: 549 KEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQ 608

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
             L+++ EEEKE+ +  HSEKLA+AFG++  PPG  IR+ KNLR+C DCH+A KFIS I 
Sbjct: 609 YSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIV 668

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REII+RD  RFHHFK   CSCGDYW
Sbjct: 669 GREIIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 209/455 (45%), Gaps = 21/455 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQIHAH 102
           S+   +   A+  +   A+ ++  M R  ++P++F FP+  KA A     S +G QIH+ 
Sbjct: 84  SYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSL 143

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +++GY      V+   ++MY K G  +     +F  +  ++ V+WN+++      G+  
Sbjct: 144 AIRFGYLPVDPFVSCAALDMYFKTGR-LKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPL 202

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             +EA+  +  +   P+  +  +   AC+       L LG Q HG  ++ G E +  ++N
Sbjct: 203 ETIEAYFGLREAGGLPNVVSACAFFNACAGAMY---LSLGEQFHGFVVKCGFEMDVSVLN 259

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +++  Y K      A+ +F     R+ VSW ++V++ +QN    EA          G +P
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEP 319

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
               ++S L  C+ L  L  G+ +HA A+R+ I   N FV SALVDMY  C  VE   ++
Sbjct: 320 TDFMVSSALTTCAGLLGLHLGRALHAVAVRSCI-DANIFVASALVDMYGKCGCVEDAEQI 378

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F     + +  WNAMI GY      + AL++F  M       PN  T+ +V+ +C R   
Sbjct: 379 FYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGL 438

Query: 402 FPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
             D  E       + G+         ++D+  R G  E +  +   M +R ++S W  ++
Sbjct: 439 TKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL 498

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
                C  HG       E+  +  EK    +++LD
Sbjct: 499 GA---CKMHGKT-----ELGRIAAEK----LFELD 521



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   + + A++    EA  +Y+   RS  +P +F   + L   AG+  L L
Sbjct: 280 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +HA  V+     +++ VA+ LV+MYGKCG  + D  ++F    +++ V+WN+MI   
Sbjct: 340 GRALHAVAVRSCID-ANIFVASALVDMYGKCGC-VEDAEQIFYETPQRNLVTWNAMIGGY 397

Query: 156 CRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLS-RRDGLRL 201
              G    AL  F  M+ S    P+  TLV+V  +CS     +DG  L
Sbjct: 398 AHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYEL 445


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/699 (36%), Positives = 391/699 (55%), Gaps = 57/699 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N+F  N +++ Y+K G +   + +F    +RD VSWN+++S        +EAV     M 
Sbjct: 70  NSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129

Query: 276 LRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             G+   + ++ +++L   S    +D G++IH   ++        FVGS+LVDMY     
Sbjct: 130 KDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFG-FGAYVFVGSSLVDMYAKMGL 188

Query: 335 VECGRRVFDFISDKKIAL-------------------------------WNAMITGYGQN 363
           V    +VFD + ++ + +                               W  MITG  QN
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
             + EA+ LF  M +  G+  +  T  SV+ AC    A  + + IH   I+ G   + +V
Sbjct: 249 GLEAEAMDLFRDMRQ-EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFV 307

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL+DMY +   +  ++ +F  M  ++ VSW  M+ GY   G   +A+ +  +MQ    
Sbjct: 308 GSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQ---- 363

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
              RN +          +P+  TL +V+  C  L++L +G + H  A+ + L + + V +
Sbjct: 364 ---RNGI----------EPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSN 410

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           AL+ +Y KCG +  + ++FD M  R+ ++W  ++  Y   G+  E ++L + M+ +G   
Sbjct: 411 ALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG--- 467

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             +KP+ VTFIA+ +ACS +G+V  G   F  M  D+GI P  DHY C++DL GRAG++E
Sbjct: 468 --LKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLE 525

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A   IN MP   D  G W++LL +CR++ N EIG+ AA++L  L+P   + Y+LLS+IY
Sbjct: 526 EAKNFINKMPFSPDSIG-WATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIY 584

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           ++   W     +R+ M+E G RKEPG SWI++  +++ F A D S   S+Q++  LE L+
Sbjct: 585 AAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLN 644

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
            +M +EGYVPD S VLH+V + EK  +L  HSEKLAIAFG+L  P G  IRV KNLRVC 
Sbjct: 645 HKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCG 704

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH ATK+ISKI  REI++RD  RFH FK+GTCSCGD+W
Sbjct: 705 DCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 262/555 (47%), Gaps = 69/555 (12%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           + +S   P+ F +  ++ A + + +++  + +   + +      +    NT+++ Y K G
Sbjct: 31  IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQ-----PNSFSWNTMLSAYSKSG 85

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+  + ++F  +  +D VSWNS+I+    +G    A++ +  M+   V   +    S  
Sbjct: 86  -DLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTM 144

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL---------------- 230
           L    +S +  + LGRQ+HG  ++ G     F+ ++L+ MYAK+                
Sbjct: 145 LLL--VSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202

Query: 231 ---------------GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
                          G V D+K LF   ++RD +SW T+++ L QN    EA+   R M 
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+  D  +  SVL AC  L  L  GKEIH   +R+     N FVGSALVDMYC CR V
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG-YNHNVFVGSALVDMYCKCRSV 321

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
                VF  +++K +  W AM+ GYGQN + EEA+ +F  M+   G+ P+  T+ SV+ +
Sbjct: 322 RYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQR-NGIEPDDFTLGSVISS 380

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C    +  +    H  A+  GL     V NAL+ +Y + G IE S  +FD+M  RD VSW
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             +++GY   G+  + + L   M                  V   KP+++T + VL  C 
Sbjct: 441 TALVSGYAQFGKANETIDLFERM-----------------LVQGLKPDAVTFIAVLSACS 483

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-N 569
               + +G++       +ML    ++      + ++D++ + G L  A+   + MP   +
Sbjct: 484 RAGLVERGQQY----FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPD 539

Query: 570 VITWNVIIMAYGMHG 584
            I W  ++ +  ++G
Sbjct: 540 SIGWATLLSSCRLYG 554



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 218/447 (48%), Gaps = 52/447 (11%)

Query: 60  EAILSYIEMTRSDI-QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA+ +Y  M +  +   +   F  +L  V+    + LG+QIH  +VK+G+G + V V ++
Sbjct: 120 EAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFG-AYVFVGSS 178

Query: 119 LVNMYGKCG-----SDMWD--------VY-----------------KVFDRITEKDQVSW 148
           LV+MY K G     S ++D        +Y                 ++F  + E+D +SW
Sbjct: 179 LVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISW 238

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
            +MI  L + G    A++ FR M    +    +T  SV  AC  L     L+ G+++H  
Sbjct: 239 TTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLR---ALKEGKEIHTL 295

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            +R G   N F+ +AL+ MY K   V  A+ +FK   ++++VSW  ++    QN    EA
Sbjct: 296 IIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEA 355

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           V     M   GI+PD  ++ SV+ +C++L  L+ G + H  AL +  LI    V +AL+ 
Sbjct: 356 VRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSG-LISFITVSNALIT 414

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           +Y  C  +E   ++FD +S +    W A+++GY Q     E + LF +M  V GL P+A 
Sbjct: 415 LYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM-LVQGLKPDAV 473

Query: 388 TMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           T  +V+ AC R+       + F      HG  I      D Y    ++D++ R GR+E +
Sbjct: 474 TFIAVLSACSRAGLVERGQQYFESMLKDHG-IIPFS---DHYT--CMIDLFGRAGRLEEA 527

Query: 441 KTIFDDMEVR-DTVSWNTMITGYTICG 466
           K   + M    D++ W T+++   + G
Sbjct: 528 KNFINKMPFSPDSIGWATLLSSCRLYG 554



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 157/302 (51%), Gaps = 6/302 (1%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   SW   +    ++    EA+  + +M +  +  D + F +VL A  G++ L  
Sbjct: 229 GMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKE 288

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GK+IH  +++ GY   +V V + LV+MY KC S  +    VF R+  K+ VSW +M+   
Sbjct: 289 GKEIHTLIIRSGYN-HNVFVGSALVDMYCKCRSVRY-AEAVFKRMANKNVVSWTAMLVGY 346

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G  + A+  F  M  + +EP  FTL SV  +C+NL+    L  G Q H  +L  G  
Sbjct: 347 GQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLA---SLEEGAQFHCQALVSGLI 403

Query: 216 NTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +   + NAL+ +Y K G ++D+  LF     RD VSW  +VS  +Q  K  E +    +M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            ++G+KPD V+  +VL ACS   +++ G++     L++  +I  S   + ++D++     
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523

Query: 335 VE 336
           +E
Sbjct: 524 LE 525



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 116/218 (53%), Gaps = 10/218 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++    EA+  + +M R+ I+PD+F   +V+ + A +  L  G Q H   
Sbjct: 338 SWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQA 397

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G  +S +TV+N L+ +YGKCGS + D  ++FD ++ +D+VSW ++++   +FGK + 
Sbjct: 398 LVSGL-ISFITVSNALITLYGKCGS-IEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANE 455

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL-RLGRQVHGNSLRVGEWNTFI--M 220
            ++ F  ML   ++P + T ++V  ACS    R GL   G+Q   + L+      F    
Sbjct: 456 TIDLFERMLVQGLKPDAVTFIAVLSACS----RAGLVERGQQYFESMLKDHGIIPFSDHY 511

Query: 221 NALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             ++ ++ + GR+++AK          D + W T++SS
Sbjct: 512 TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSS 549


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/775 (35%), Positives = 417/775 (53%), Gaps = 67/775 (8%)

Query: 117  NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
            N +++ Y   G D+     +F     ++  +W  M+      G+   AL  FR ML   V
Sbjct: 292  NLILSAYSSSG-DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGV 350

Query: 177  EPSSFTLVSVA--LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
             P   T+ +V     C+  S          +H  +++ G + + F+ N L+  Y K G +
Sbjct: 351  IPDRVTVTTVLNLPGCTVPS----------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 400

Query: 234  DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
              A+ +F    D+D V++N ++   S+     +A+     M   G         S  P  
Sbjct: 401  AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY--------SRHP-- 450

Query: 294  SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
              L +L      H+ +    +L  N FV ++L+D Y  C  ++  RR+FD + ++    +
Sbjct: 451  --LHLLQYS---HSRSRSTSVL--NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 503

Query: 354  NAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPD---KEG 407
            N +I  Y  N+     L LF +M+++     + P AT +S        + + PD    + 
Sbjct: 504  NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV-------AGSLPDVHIGKQ 556

Query: 408  IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
            IH   + LGL  +  + NAL+DMYS+ G ++ +K+ F +   +  +SW  +ITGY   GQ
Sbjct: 557  IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 616

Query: 468  HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
            H +AL L  +M+       R  +          +P+  T  +++    +L+ +  G+++H
Sbjct: 617  HEEALQLFSDMR-------RAGL----------RPDRATFSSIIKASSSLAMIGLGRQLH 659

Query: 528  AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            +Y IR+   + V  GS LVDMYAKCGCL+ A R FD MP RN I+WN +I AY  +GE +
Sbjct: 660  SYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAK 719

Query: 588  EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
              +++ + M+  G       P+ VTF+++ AACSH+G+  E M  F+ MK  Y I P  +
Sbjct: 720  NAIKMFEGMLHCG-----FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 774

Query: 648  HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
            HYACV+D LGR G      +++  MP + D    W+S+L +CRIH N E+  +AA  LF 
Sbjct: 775  HYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGNQELARVAADKLFG 833

Query: 708  LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
            +EP  A+ YV+LSNIY+ A  W+ A  V+K M++ GVRKE G SW+E   +I+ F + D 
Sbjct: 834  MEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDL 893

Query: 768  SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
            +    +++   L+ L + M K+GY PD +C LH V+ E K   L  HSE+LAIAF ++NT
Sbjct: 894  TSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNT 953

Query: 828  PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            P GT IR+ KNL  C DCH   K ISKI +R+II+RD RRFHHFK+G CSCGDYW
Sbjct: 954  PAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 239/520 (45%), Gaps = 56/520 (10%)

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLG 231
           S   P+  T   V     NL  R  L  G      ++  ++   N F +N +++ Y+  G
Sbjct: 243 SQAAPAGVTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSG 302

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV-- 289
            +  A+ LF S   R+  +W  ++ + +   +  +A+   R M   G+ PD V++ +V  
Sbjct: 303 DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN 362

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           LP C       T   +H +A++   L  + FV + L+D YC    +   RRVF  + DK 
Sbjct: 363 LPGC-------TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD 414

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
              +NAM+ G  +     +AL LF  M   AG   +   +     +  RS +        
Sbjct: 415 AVTYNAMMMGCSKEGLHTQALQLFAAMRR-AGYSRHPLHLLQYSHSRSRSTSV------- 466

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
                     + +V N+L+D YS+   ++  + +FD+M  RD VS+N +I  Y       
Sbjct: 467 ---------LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAA 517

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
             L L REMQ +            D  VL          T+L   G+L  +  GK+IHA 
Sbjct: 518 TVLRLFREMQKL----------GFDRQVL-------PYATMLSVAGSLPDVHIGKQIHAQ 560

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            +   LA++ ++G+AL+DMY+KCG L+ A+  F     ++ I+W  +I  Y  +G+ +E 
Sbjct: 561 LVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEA 620

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDH 648
           L+L  +M     R   ++P+  TF ++  A S   M+  G  L  Y ++  Y  + S   
Sbjct: 621 LQLFSDM-----RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGY--KSSVFS 673

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            + +VD+  + G +++A +  + MP     + +W++++ A
Sbjct: 674 GSVLVDMYAKCGCLDEALRTFDEMPER--NSISWNAVISA 711



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 9/248 (3%)

Query: 56  NQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           NQ    +L  + EM +         +  +L     + D+ +GKQIHA +V  G   S   
Sbjct: 513 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA-SEDL 571

Query: 115 VANTLVNMYGKCGSDMWDVYKV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           + N L++MY KCG  M D  K  F   +EK  +SW ++I    + G+ + AL+ F  M  
Sbjct: 572 LGNALIDMYSKCG--MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR 629

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR 232
           + + P   T  S+  A S+L+    + LGRQ+H   +R G + + F  + L+ MYAK G 
Sbjct: 630 AGLRPDRATFSSIIKASSSLAM---IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 686

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D+A   F    +R+ +SWN ++S+ +   +   A+     M   G  PD V+  SVL A
Sbjct: 687 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 746

Query: 293 CSHLEMLD 300
           CSH  + D
Sbjct: 747 CSHNGLAD 754



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 89/149 (59%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ Q  EA+  + +M R+ ++PD   F +++KA + +  + LG+Q+H+++
Sbjct: 603 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 662

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GY  SSV   + LV+MY KCG  + +  + FD + E++ +SWN++I+    +G+   
Sbjct: 663 IRSGYK-SSVFSGSVLVDMYAKCGC-LDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 720

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++ F  ML+    P S T +SV  ACS+
Sbjct: 721 AIKMFEGMLHCGFNPDSVTFLSVLAACSH 749


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/717 (35%), Positives = 413/717 (57%), Gaps = 34/717 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D     ++LK     + L  GK IH  +V  G   +++T+  +L+N+Y  C   ++   K
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQ-NNITLCKSLINLYFSC--HLFQSAK 58

Query: 136 VFDRITEK--DQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSN 192
           +  +  E   D   WN ++A   +   +   LE F R++ +  ++P +FT  SV  ACS 
Sbjct: 59  LVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSG 118

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L R   +  G+ VH + ++ G   +  +M++ + MYAK    +DA  LF    +RD+ SW
Sbjct: 119 LGR---VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASW 175

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++S   Q+ +  +A+    +M + G KPD V++ +V+ +C+ L  L+ GKEIH   +R
Sbjct: 176 NNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVR 235

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +   +D  FV SALVDMY  C  +E  + VF+ I  K +  WN+MI GY      +  + 
Sbjct: 236 SGFALDG-FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 294

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M+E  G+ P  TT+SS++ AC RS      + IHG+ I+  +  D +V ++L+D+Y
Sbjct: 295 LFRRMDE-EGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLY 353

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G I  ++ +F +M   + VSWN MI+GY   G + +AL++  +M+            
Sbjct: 354 FKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA---------- 403

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                    KP++IT  +VLP C  L+ L KGKEIH + I + L  + VV  AL+DMYAK
Sbjct: 404 -------GVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 456

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG ++ A  +F+ +P R+ ++W  +I AYG HG+  E L+L + M     +  + KP++V
Sbjct: 457 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM-----QQSDAKPDKV 511

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+A+ +ACSH+G+V EG   F +M  +YG +P+ +HY+C++DLLGR G++ +AY+++  
Sbjct: 512 TFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 571

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
            P   +  G  S+L  AC +H+ +++GE   + L   +PD  S Y++LSN+Y+S + WD+
Sbjct: 572 TPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDE 631

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
              VR K+KE+G++K PGCSWIE G  IH F+  D SH Q++ ++  +  L+  + K
Sbjct: 632 VRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 688



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/500 (32%), Positives = 258/500 (51%), Gaps = 34/500 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD F +P+VLKA +G+  +  GK +H HV+K G+ +  V V ++ V MY KC     D
Sbjct: 102 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM-DVVVMSSAVGMYAKCNV-FED 159

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             K+FD + E+D  SWN++I+   + G+ + ALE F  M  S  +P S TL +V  +C+ 
Sbjct: 160 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 219

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L     L  G+++H   +R G   + F+ +AL+ MY K G ++ AK +F+  + +++VSW
Sbjct: 220 LL---DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW 276

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N++++  S        +   R+M   GI+P   +++S+L ACS    L  GK IH Y +R
Sbjct: 277 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 336

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N +  D  FV S+L+D+Y  C  +     VF  +    +  WN MI+GY +     EAL+
Sbjct: 337 NRVEAD-IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 395

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M + AG+ P+A T +SV+PAC +       + IH   I+  L  +  V  AL+DMY
Sbjct: 396 IFTDMRK-AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMY 454

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G ++ +  IF+ +  RD VSW +MI  Y   GQ  +AL L  +MQ  +         
Sbjct: 455 AKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSD--------- 505

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-----TDVVVGSALV 546
                    KP+ +T + +L  C     + +G     Y    M+A       V   S L+
Sbjct: 506 --------AKPDKVTFLAILSACSHAGLVDEG----CYYFNQMIAEYGFKPAVEHYSCLI 553

Query: 547 DMYAKCGCLNFARRVFDLMP 566
           D+  + G L  A  +    P
Sbjct: 554 DLLGRVGRLREAYEILQRTP 573



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 229/429 (53%), Gaps = 14/429 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +  Q  +A+  + EM  S  +PD+     V+ + A + DL  GK+IH  +
Sbjct: 174 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 233

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+ L    V++ LV+MYGKCG  +    +VF++I  K+ VSWNSMIA     G    
Sbjct: 234 VRSGFALDGF-VSSALVDMYGKCGC-LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 291

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +E FR M    + P+  TL S+ +AC   SR   L+LG+ +HG  +R   E + F+ ++
Sbjct: 292 CIELFRRMDEEGIRPTLTTLSSILMAC---SRSVNLQLGKFIHGYIIRNRVEADIFVNSS 348

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G +  A+ +F++    ++VSWN ++S   +   +LEA++    M   G+KPD
Sbjct: 349 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 408

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++  SVLPACS L +L+ GKEIH + + + + I N  V  AL+DMY  C  V+    +F
Sbjct: 409 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI-NEVVMGALLDMYAKCGAVDEALHIF 467

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + ++    W +MI  YG +    EAL LF KM++ +   P+  T  +++ AC  +   
Sbjct: 468 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQ-SDAKPDKVTFLAILSACSHA-GL 525

Query: 403 PDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMI 459
            D+   + + +    G    V++   L+D+  R+GR+  +  I     ++R+ V    + 
Sbjct: 526 VDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV--GLLS 583

Query: 460 TGYTICGQH 468
           T ++ C  H
Sbjct: 584 TLFSACHLH 592


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/748 (35%), Positives = 406/748 (54%), Gaps = 83/748 (11%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVF+++ ++D +SWN M++   + G    A   F  M   +V       VS     S  +
Sbjct: 112 KVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV-------VSWNAMLSGFA 164

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           +   +   R++    L     N    N L++ Y + GR++DA+ LF S  D ++VSWN +
Sbjct: 165 QNGFVEEARKIFDQMLVK---NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    +  +  +A     +M +R    D +S   ++   +   +L   +      L  ++
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARR-----LFEEL 272

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            I + F  +A+V  +     ++   R+F+ + +K    WNAMI GY Q++  E+A  LF 
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M       P+  T S                                  N ++  Y++ 
Sbjct: 333 QM-------PSRNTSS---------------------------------WNTMVTGYAQC 352

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G I+ +K +FD+M  RD +SW  MI+GY   GQ  +AL L  +M+              D
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR-------------D 399

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +L    N   L   L  C  ++AL  GK++H   ++    T  + G+AL+ MY KCG 
Sbjct: 400 GGIL----NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A  VF+ +  +++++WN +I  Y  HG G+E L L ++M         +KP++VT +
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT------IKPDDVTLV 509

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +ACSH+G V +GM+ F  M  +YGI  +  HY C++DLLGRAG++++A  L+  MP 
Sbjct: 510 GVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF 569

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
            +  A  W +LLGA RIH + E+GE AA+ +F +EPD +  YVLLSN+Y+++  W +  +
Sbjct: 570 -YPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R KM++ GV+K PG SW+E  ++ H F  GD SH ++E+++ +LE L   ++K+G+V  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  VLH+V EEEKE +L  HSEKLA+AFGIL+ PPG  IRV KNLRVC DCH A K ISK
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I  R+II+RD  RFHHF  G+CSCGDYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 250/557 (44%), Gaps = 63/557 (11%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y K G ++     +F+++ EKD VSWN+M++   + G  + A + F  ML  N 
Sbjct: 126 NVMLSGYVKNG-NLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
           E S   L+S  +    +         R++  + +   +W     N LM  Y +  R+DDA
Sbjct: 184 EISWNGLLSAYVQNGRIED------ARRLFDSKM---DWEIVSWNCLMGGYVRKKRLDDA 234

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---------------GIKP 281
           ++LF     RD +SWN +++  +QN    EA     ++ +R               G+  
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294

Query: 282 DGVSIASVLPACSHLE-------MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           +   I   +P  + +         + + +   A  L + +   N+   + +V  Y  C  
Sbjct: 295 EATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGN 354

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++  + +FD +  +    W AMI+GY Q+   EEAL LFIKM+   G+  N + ++  + 
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALS 413

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +C    A    + +HG  +K G        NAL+ MY + G IE +  +F+D+  +D VS
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS 473

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WNTMI GY   G   +AL L   M+                  +  KP+ +TL+ VL  C
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMK------------------MTIKPDDVTLVGVLSAC 515

Query: 515 GALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
                + KG E      +N  +  +    + ++D+  + G L+ A  +   MP   +  T
Sbjct: 516 SHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMD 631
           W  ++ A  +HG+ +     L    AE  +  E++P N   ++ L    + SG   E  +
Sbjct: 576 WGALLGASRIHGDTE-----LGEKAAE--KVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 632 LFYKMKDDYGIEPSPDH 648
           +  KM+D  G++  P +
Sbjct: 629 MRSKMRDK-GVKKVPGY 644



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 183/435 (42%), Gaps = 38/435 (8%)

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           D D+V WN  +S+  +  +   A+     M  R        I+  L         D  ++
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN----NKFDCARK 112

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +       D++  N      ++  Y     +   R +F+ + +K +  WNAM++G+ QN 
Sbjct: 113 VFEKMPDRDLISWN-----VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           + EEA  +F +M     L  N  + + ++ A V++    D   +    +   +       
Sbjct: 168 FVEEARKIFDQM-----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEI----VSW 218

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM------ 478
           N LM  Y R  R++ ++++FD M VRD +SWN MITGY   G   +A  L  E+      
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 479 --QNMEEEKNRNNVYDLDETVLR--PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
               M     +N + D    +    P+ N ++   ++ G      + K +E+       M
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKAREL----FDQM 334

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
            + +    + +V  YA+CG ++ A+ +FD MP R+ I+W  +I  Y   G+ +E L L  
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  +G        N        ++C+    +  G  L  ++    G +        ++ 
Sbjct: 395 KMKRDGG-----ILNRSALACALSSCAEIAALELGKQLHGRLV-KAGFQTGYIAGNALLA 448

Query: 655 LLGRAGKVEDAYQLI 669
           + G+ G +E+A+ + 
Sbjct: 449 MYGKCGSIEEAFDVF 463



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 111/219 (50%), Gaps = 13/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S Q  EA+  +I+M R     +  A    L + A I  L LGKQ+H  +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR--FGKW 161
           VK G+    +   N L+ MYGKCGS + + + VF+ ITEKD VSWN+MIA   R  FGK 
Sbjct: 432 VKAGFQTGYIA-GNALLAMYGKCGS-IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKE 489

Query: 162 DLAL-EAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFI 219
            LAL E+ +M     ++P   TLV V  ACS+    D G+     ++ N       N   
Sbjct: 490 ALALFESMKM----TIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA--NAKH 543

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
              ++ +  + GR+D+A  L KS     D  +W  ++ +
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/701 (34%), Positives = 413/701 (58%), Gaps = 33/701 (4%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYA---KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H +++++G  +  +    +  +    + G++  A+ +F +     L  WNT++   S
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           + +     V     M    IKPD  +   +L   +    L  GK +  +A+++     N 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHG-FDSNL 142

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           FV  A + M+  CR V+  R+VFD     ++  WN M++GY + +  +++ MLFI+ME+ 
Sbjct: 143 FVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK- 201

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ PN+ T+  ++ AC + +     + I+ +     + R+  ++N L+DM++  G ++ 
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDE 261

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++++FD+M+ RD +SW +++TG+   GQ    + L R+  +   E++  +   + +  LR
Sbjct: 262 AQSVFDNMKNRDVISWTSIVTGFANIGQ----IDLARKYFDQIPERDYVSWTAMIDGYLR 317

Query: 500 ------------------PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                              KP+  T++++L  C  L AL  G+ +  Y  +N +  D  V
Sbjct: 318 MNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFV 377

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           G+AL+DMY KCG +  A++VF  M  ++  TW  +I+   ++G G+E L +  NM+    
Sbjct: 378 GNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIE--- 434

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               + P+E+T+I +  AC+H+GMV +G   F  M   +GI+P+  HY C+VDLLGRAG+
Sbjct: 435 --ASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGR 492

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +E+A+++I  MP +   +  W SLLGACR+H+NV++ E+AA+ +  LEP+  + YVLL N
Sbjct: 493 LEEAHEVIVNMPVK-PNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCN 551

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IY++ + W+    VRK M E G++K PGCS +E    +++F+AGD SH QS++++  LEN
Sbjct: 552 IYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLEN 611

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           + + + K GY PDTS V  ++ EE+KET L  HSEKLAIA+ ++++ PG TIR+ KNLR+
Sbjct: 612 MMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRM 671

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K +S+  +RE+I+RD  RFHHF++G+CSC ++W
Sbjct: 672 CVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 237/485 (48%), Gaps = 47/485 (9%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++  +R N  +  +  Y+ M  S+I+PD F FP +LK       L  GK +  H V
Sbjct: 75  WNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAV 134

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           K+G+  S++ V    ++M+  C   + D+  KVFD     + V+WN M++   R  ++  
Sbjct: 135 KHGFD-SNLFVQKAFIHMFSLC--RLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKK 191

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGEWNTFIMNA 222
           +   F  M    V P+S TLV +  ACS L   +G + + + ++G    + E N  + N 
Sbjct: 192 SKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGG---IVERNLILENV 248

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS----------------------- 259
           L+ M+A  G +D+A+++F + ++RD++SW +IV+  +                       
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308

Query: 260 --------QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
                   + ++F+EA+   R+M +  +KPD  ++ S+L AC+HL  L+ G+ +  Y  +
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  +++FVG+AL+DMY  C  V   ++VF  +  K    W AMI G   N + EEAL 
Sbjct: 369 NSIK-NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQNALMDM 430
           +F  M E A + P+  T   V+ AC  +      +       ++ G+  +      ++D+
Sbjct: 428 MFSNMIE-ASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDL 486

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDA-LMLLREMQNMEEEKNRN 488
             R GR+E +  +  +M V+ +++ W +++     C  H +  L  +   Q +E E    
Sbjct: 487 LGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA---CRVHKNVQLAEMAAKQILELEPENG 543

Query: 489 NVYDL 493
            VY L
Sbjct: 544 AVYVL 548



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 258/584 (44%), Gaps = 63/584 (10%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIH+H +K G     +     +          M    +VFD I +     WN+MI    
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R       +  + +ML SN++P  FT           +R   L+ G+ +  ++++ G + 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTF---PFLLKGFTRNMALQYGKVLLNHAVKHGFDS 140

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+  A + M++    VD A+ +F   +  ++V+WN ++S  ++  +F ++ M   +M 
Sbjct: 141 NLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEME 200

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE- 334
            RG+ P+ V++  +L ACS L+ L+ GK I+ Y +   I+  N  + + L+DM+  C E 
Sbjct: 201 KRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAACGEM 259

Query: 335 ------------------------------VECGRRVFDFISDKKIALWNAMITGYGQNE 364
                                         ++  R+ FD I ++    W AMI GY +  
Sbjct: 260 DEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMN 319

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
              EAL LF +M +++ + P+  TM S++ AC    A    E +  +  K  +  D +V 
Sbjct: 320 RFIEALALFREM-QMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVG 378

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NAL+DMY + G +  +K +F +M  +D  +W  MI G  I G   +AL +   M      
Sbjct: 379 NALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM------ 432

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-AYAIRNMLATDVVVGS 543
                   ++ ++    P+ IT + VL  C     + KG+    +  +++ +  +V    
Sbjct: 433 --------IEASI---TPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYG 481

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            +VD+  + G L  A  V   MPV+ N I W  ++ A  +H   Q      K ++     
Sbjct: 482 CMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE 541

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            G V    V    ++AAC       E +    K+  + GI+ +P
Sbjct: 542 NGAVY---VLLCNIYAACKR----WENLRQVRKLMMERGIKKTP 578



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 62/381 (16%)

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE---VECGR 339
           G S  S+L  C  +  L   K+IH++ ++  +  D  F    +   +C   E   +   R
Sbjct: 7   GESPISLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIA--FCCAHESGKMIYAR 61

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VFD I    + +WN MI GY +  + +  + +++ M   + + P+  T   ++    R+
Sbjct: 62  QVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLML-ASNIKPDRFTFPFLLKGFTRN 120

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A    + +  HA+K G   + +VQ A + M+S    +++++ +FD  +  + V+WN M+
Sbjct: 121 MALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIML 180

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           +GY    Q   + ML  EM+       +  V           PNS+TL+ +L  C  L  
Sbjct: 181 SGYNRVKQFKKSKMLFIEME-------KRGV----------SPNSVTLVLMLSACSKLKD 223

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GK I+ Y    ++  ++++ + L+DM+A CG ++ A+ VFD M  R+VI+W  I+  
Sbjct: 224 LEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTG 283

Query: 580 YGMHGEGQ-------------------------------EVLELLKNMVAEGSRGGEVKP 608
           +   G+                                 E L L + M     +   VKP
Sbjct: 284 FANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREM-----QMSNVKP 338

Query: 609 NEVTFIALFAACSHSGMVSEG 629
           +E T +++  AC+H G +  G
Sbjct: 339 DEFTMVSILTACAHLGALELG 359



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 41/294 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L    R  QF+++ + +IEM +  + P++     +L A + ++DL  GK I+ + 
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY- 233

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG-----SDMWD-------------------------V 133
           +  G    ++ + N L++M+  CG       ++D                          
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            K FD+I E+D VSW +MI    R  ++  AL  FR M  SNV+P  FT+VS+  AC++L
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHL 353

Query: 194 SRRDGLRLGRQVH----GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                L LG  V      NS++    +TF+ NAL+ MY K G V  AK +FK    +D  
Sbjct: 354 G---ALELGEWVKTYIDKNSIKN---DTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKF 407

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           +W  ++  L+ N    EA+     M    I PD ++   VL AC+H  M++ G+
Sbjct: 408 TWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQ 461


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/609 (39%), Positives = 355/609 (58%), Gaps = 26/609 (4%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           MAL G         + + AC     L  G+++HA  +         F+G+ LV MY  C 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYR-PAVFLGTRLVTMYVRCG 91

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++  R V D + ++ +  W  MI+GY Q E   EAL LFIKM   AG  PN  T+++V+
Sbjct: 92  ALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR-AGCIPNEYTLATVL 150

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            +C   ++    + +H   +K       +V ++L+DMY++   I+ ++ +FD +  RD V
Sbjct: 151 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 210

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           S   +I+GY   G   +AL L R++ +   +                  N +T  T++  
Sbjct: 211 SCTAIISGYAQKGLDEEALDLFRQLYSEGMQ-----------------CNHVTFTTLVTA 253

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L++L  GK++HA  +R  L   V + ++L+DMY+KCG L ++RRVFD M  R+V++W
Sbjct: 254 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 313

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++M YG HG G EV+ L K++        EVKP+ VT +A+ + CSH G+V EG+D+F
Sbjct: 314 NAMLMGYGRHGLGHEVISLFKDL------HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIF 367

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             +  +        HY C++DLLGR+G++E A  LI  MP E      W SLLGACR+H 
Sbjct: 368 DTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE-STPSIWGSLLGACRVHA 426

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NV +GE+ AQ L  +EP+ A +YV+LSNIY++A +W     VRK M E  V KEPG SWI
Sbjct: 427 NVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 486

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
                IH F + +  H   + ++  ++ +   ++  G+VPD SCVLH+V++E+KE +L G
Sbjct: 487 ILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLG 546

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAI FG++NTPPG TIRV KNLR+C DCH   KF+SK+  REI LRD  RFH   +
Sbjct: 547 HSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTH 606

Query: 874 GTCSCGDYW 882
           G C+CGDYW
Sbjct: 607 GNCTCGDYW 615



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 210/413 (50%), Gaps = 28/413 (6%)

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R  L  GRQVH   +        F+   L+ MY + G +DDA+ +     +R +VSW T+
Sbjct: 55  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 114

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S  SQ ++ +EA+    +M   G  P+  ++A+VL +CS  + +  GK++H+  ++ + 
Sbjct: 115 ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN- 173

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              + FVGS+L+DMY     ++  RRVFD + ++ +    A+I+GY Q   DEEAL LF 
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 233

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           ++    G+  N  T +++V A     +    + +H   ++  L     +QN+L+DMYS+ 
Sbjct: 234 QLYS-EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKC 292

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G++  S+ +FD+M  R  VSWN M+ GY   G+HG    ++   +++ +E          
Sbjct: 293 GKLLYSRRVFDNMLERSVVSWNAMLMGY---GRHGLGHEVISLFKDLHKE---------- 339

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKC 552
                 KP+S+TL+ VL GC     + +G +I    ++   A  +  G    ++D+  + 
Sbjct: 340 -----VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSAL-LHTGHYGCIIDLLGRS 393

Query: 553 GCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
           G L  A  + + MP  +  + W  ++ A  +H     G+ V + L  M  E +
Sbjct: 394 GRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENA 446



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 212/418 (50%), Gaps = 19/418 (4%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A + A    + L  G+Q+HA ++   Y   +V +   LV MY +CG+ + D   V DR
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYR-PAVFLGTRLVTMYVRCGA-LDDARNVLDR 102

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + E+  VSW +MI+   +  +   AL+ F  ML +   P+ +TL +V  +CS       +
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG---PQSI 159

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+QVH   ++   E + F+ ++L+ MYAK   + +A+ +F +  +RD+VS   I+S  
Sbjct: 160 YQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGY 219

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q     EA+   RQ+   G++ + V+  +++ A S L  LD GK++HA  LR ++    
Sbjct: 220 AQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPF-- 277

Query: 319 SFVG--SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            FV   ++L+DMY  C ++   RRVFD + ++ +  WNAM+ GYG++    E + LF  +
Sbjct: 278 -FVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 336

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG---LGRDRYVQNALMDMYSR 433
            +   + P++ T+ +V+  C       +   I    +K     L    Y    ++D+  R
Sbjct: 337 HK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGR 392

Query: 434 MGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            GR+E +  + ++M    T S W +++    +        ++ +++  ME E   N V
Sbjct: 393 SGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 450



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 145/264 (54%), Gaps = 9/264 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++ +  EA+  +I+M R+   P+ +    VL + +G Q +  GKQ+H+ +
Sbjct: 110 SWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLL 169

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK  +  S + V ++L++MY K   ++ +  +VFD + E+D VS  ++I+   + G  + 
Sbjct: 170 VKTNFE-SHMFVGSSLLDMYAK-SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 227

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI--MN 221
           AL+ FR +    ++ +  T  ++  A S L+  D    G+QVH   LR  E   F+   N
Sbjct: 228 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD---YGKQVHALILR-KELPFFVALQN 283

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY+K G++  ++ +F +  +R +VSWN ++    ++    E +   + +  + +KP
Sbjct: 284 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKP 342

Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
           D V++ +VL  CSH  ++D G +I
Sbjct: 343 DSVTLLAVLSGCSHGGLVDEGLDI 366


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/681 (37%), Positives = 381/681 (55%), Gaps = 26/681 (3%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           + +H   LR+  + + +++N ++      G  + +K +F   ++ ++  WNT++  L   
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D F +A+     M   G  P+  +I  VL AC+    +  G +IH+  ++     D  FV
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD-VFV 151

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            ++L+ +Y  C   +   +VFD I DK +  W A+ITGY  + +  EA+  F K+ E+ G
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM-G 210

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P++ ++  V+ AC R       E I  +    G+GR+ +V  +L+DMY + G +E + 
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF  M  +D VSW+TMI GY   G    AL L  +MQ+              E +   K
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS--------------ENL---K 313

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+  T++ VL  C  L AL  G    +   RN   ++ V+G+AL+DMY+KCG +  A  +
Sbjct: 314 PDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEI 373

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  M  ++ + WN +++   M+G  + V  L   +   G     ++P+E TFI L   C+
Sbjct: 374 FTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG-----IRPDENTFIGLLCGCT 428

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H G V+EG   F  MK  + + PS +HY C+VDLLGRAG + +A+QLIN MP +   A  
Sbjct: 429 HGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMK-PNAVV 487

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLG C++H++  + E   + L  LEP  + +YV LSNIYS    W++A  +R  MKE
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             ++K   CSWIE    +H+FL GD SH  SE+++  L+ L   ++  G+VP T  VL +
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFD 607

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           + EEEKE  L  HSEKLA+AFG++ +PP   IRV KNLRVC DCH A K ISKI  REII
Sbjct: 608 IEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREII 667

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFH F +G+CSC DYW
Sbjct: 668 IRDTNRFHTFIDGSCSCRDYW 688



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 247/512 (48%), Gaps = 43/512 (8%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWNSMIA 153
           K IHA +++       +   N L+N+   C  D         VF ++ E +   WN+MI 
Sbjct: 33  KHIHARLLRL-----HLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
            L     +D A+  +  M      P++FT+  V  AC   +R+  +RLG ++H   ++ G
Sbjct: 88  GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC---ARKLDVRLGLKIHSLLVKAG 144

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + + F+  +L+++Y K    DDA  +F    D+++VSW  I++    +  F EA+   +
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           ++   G+KPD  S+  VL AC+ L    +G+ I  Y + +  +  N FV ++L+DMY  C
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY-ISDSGMGRNVFVATSLLDMYVKC 263

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +E    +F  + +K I  W+ MI GY  N   ++AL LF +M+    L P+  TM  V
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGV 322

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN-----ALMDMYSRMGRIEISKTIFDDM 447
           + AC    A     GI   ++   + R+ ++ N     AL+DMYS+ G +  +  IF  M
Sbjct: 323 LSACATLGAL--DLGIWASSL---MDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           + +D V WN M+ G ++ G H  A+  L  +              +++  +RP  N  T 
Sbjct: 378 KKKDRVVWNAMMVGLSMNG-HAKAVFSLFSL--------------VEKHGIRPDEN--TF 420

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           + +L GC     + +G++      R   L   +     +VD+  + G LN A ++ + MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480

Query: 567 VR-NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           ++ N + W  ++    +H +     ++LK ++
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 222/453 (49%), Gaps = 18/453 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R     + F +AI  Y  M      P+NF  P VLKA A   D+ LG +IH+ +V
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K GY    V V  +L+++Y KC  +  D  KVFD I +K+ VSW ++I      G +  A
Sbjct: 142 KAGYD-HDVFVKTSLLSLYVKC-DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           + AF+ +L   ++P SF+LV V  AC+ L     G  + R +  + +     N F+  +L
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGR---NVFVATSL 256

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G ++ A  +F +  ++D+VSW+T++   + N    +A+    QM    +KPD 
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDC 316

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++  VL AC+ L  LD G    +   RN+ L  N  +G+AL+DMY  C  V     +F 
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFL-SNPVLGTALIDMYSKCGSVTQAWEIFT 375

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +  K   +WNAM+ G   N + +    LF  + E  G+ P+  T   ++  C     F 
Sbjct: 376 AMKKKDRVVWNAMMVGLSMNGHAKAVFSLF-SLVEKHGIRPDENTFIGLLCGCTHG-GFV 433

Query: 404 DKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
           ++     + +K        +++   ++D+  R G +  +  + ++M ++ + V W  ++ 
Sbjct: 434 NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLG 493

Query: 461 GYTICGQHGD---ALMLLREMQNMEEEKNRNNV 490
           G   C  H D   A  +L+++  +E   + N V
Sbjct: 494 G---CKLHKDTHLAEQVLKKLIELEPWNSGNYV 523



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 14/267 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     S  FREAI ++ ++    ++PD+F+   VL A A + D + G+ I  ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G G  +V VA +L++MY KCG ++     +F  + EKD VSW++MI      G    
Sbjct: 242 SDSGMG-RNVFVATSLLDMYVKCG-NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-- 221
           AL+ F  M   N++P  +T+V V  AC+ L   D   LG  +  +SL   + N F+ N  
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALD---LG--IWASSLM--DRNEFLSNPV 352

Query: 222 ---ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
              AL+ MY+K G V  A  +F + + +D V WN ++  LS N            +   G
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEI 305
           I+PD  +   +L  C+H   ++ G++ 
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQF 439



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F   + IH   ++L L +D Y+ N ++      G    SK +F  ++  +   WNTMI G
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                   DA+ L   M        R   +          PN+ T+  VL  C     + 
Sbjct: 89  LVSKDCFDDAIHLYGSM--------RGGGF---------LPNNFTIPFVLKACARKLDVR 131

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G +IH+  ++     DV V ++L+ +Y KC   + A +VFD +P +NV++W  II  Y 
Sbjct: 132 LGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G  +E +   K ++  G     +KP+  + + + AAC+  G  + G +   +   D G
Sbjct: 192 SSGHFREAIGAFKKLLEMG-----LKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSG 245

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           +  +      ++D+  + G +E A  + + MP +     +WS+++
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEK--DIVSWSTMI 288


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/681 (37%), Positives = 381/681 (55%), Gaps = 26/681 (3%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           + +H   LR+  + + +++N ++      G  + +K +F   ++ ++  WNT++  L   
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D F +A+     M   G  P+  +I  VL AC+    +  G +IH+  ++     D  FV
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD-VFV 151

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            ++L+ +Y  C   +   +VFD I DK +  W A+ITGY  + +  EA+  F K+ E+ G
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM-G 210

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P++ ++  V+ AC R       E I  +    G+GR+ +V  +L+DMY + G +E + 
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF  M  +D VSW+TMI GY   G    AL L  +MQ+        N+          K
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-------ENL----------K 313

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+  T++ VL  C  L AL  G    +   RN   ++ V+G+AL+DMY+KCG +  A  +
Sbjct: 314 PDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEI 373

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  M  ++ + WN +++   M+G  + V  L   +   G     ++P+E TFI L   C+
Sbjct: 374 FTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG-----IRPDENTFIGLLCGCT 428

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H G V+EG   F  MK  + + PS +HY C+VDLLGRAG + +A+QLIN MP +   A  
Sbjct: 429 HGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMK-PNAVV 487

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLG C++H++  + E   + L  LEP  + +YV LSNIYS    W++A  +R  MKE
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKE 547

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             ++K   CSWIE    +H+FL GD SH  SE+++  L+ L   ++  G+VP T  VL +
Sbjct: 548 QQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFD 607

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           + EEEKE  L  HSEKLA+AFG++ +PP   IRV KNLRVC DCH A K ISKI  REII
Sbjct: 608 IEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREII 667

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFH F +G+CSC DYW
Sbjct: 668 IRDTNRFHTFIDGSCSCRDYW 688



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 247/512 (48%), Gaps = 43/512 (8%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWNSMIA 153
           K IHA +++       +   N L+N+   C  D         VF ++ E +   WN+MI 
Sbjct: 33  KHIHARLLRL-----HLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIR 87

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
            L     +D A+  +  M      P++FT+  V  AC   +R+  +RLG ++H   ++ G
Sbjct: 88  GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC---ARKLDVRLGLKIHSLLVKAG 144

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + + F+  +L+++Y K    DDA  +F    D+++VSW  I++    +  F EA+   +
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           ++   G+KPD  S+  VL AC+ L    +G+ I  Y + +  +  N FV ++L+DMY  C
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY-ISDSGMGRNVFVATSLLDMYVKC 263

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +E    +F  + +K I  W+ MI GY  N   ++AL LF +M+    L P+  TM  V
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGV 322

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN-----ALMDMYSRMGRIEISKTIFDDM 447
           + AC    A     GI   ++   + R+ ++ N     AL+DMYS+ G +  +  IF  M
Sbjct: 323 LSACATLGAL--DLGIWASSL---MDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           + +D V WN M+ G ++ G H  A+  L  +              +++  +RP  N  T 
Sbjct: 378 KRKDRVVWNAMMVGLSMNG-HAKAVFSLFSL--------------VEKHGIRPDEN--TF 420

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           + +L GC     + +G++      R   L   +     +VD+  + G LN A ++ + MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480

Query: 567 VR-NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           ++ N + W  ++    +H +     ++LK ++
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 222/453 (49%), Gaps = 18/453 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R     + F +AI  Y  M      P+NF  P VLKA A   D+ LG +IH+ +V
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K GY    V V  +L+++Y KC  +  D  KVFD I +K+ VSW ++I      G +  A
Sbjct: 142 KAGYD-HDVFVKTSLLSLYVKC-DNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           + AF+ +L   ++P SF+LV V  AC+ L     G  + R +  + +     N F+  +L
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGR---NVFVATSL 256

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G ++ A  +F +  ++D+VSW+T++   + N    +A+    QM    +KPD 
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDC 316

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++  VL AC+ L  LD G    +   RN+ L  N  +G+AL+DMY  C  V     +F 
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFL-SNPVLGTALIDMYSKCGSVTQAWEIFT 375

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +  K   +WNAM+ G   N + +    LF  + E  G+ P+  T   ++  C     F 
Sbjct: 376 AMKRKDRVVWNAMMVGLSMNGHAKAVFSLF-SLVEKHGIRPDENTFIGLLCGCTHG-GFV 433

Query: 404 DKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
           ++     + +K        +++   ++D+  R G +  +  + ++M ++ + V W  ++ 
Sbjct: 434 NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLG 493

Query: 461 GYTICGQHGD---ALMLLREMQNMEEEKNRNNV 490
           G   C  H D   A  +L+++  +E   + N V
Sbjct: 494 G---CKLHKDTHLAEQVLKKLIELEPWNSGNYV 523



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 14/267 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     S  FREAI ++ ++    ++PD+F+   VL A A + D + G+ I  ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G G  +V VA +L++MY KCG ++     +F  + EKD VSW++MI      G    
Sbjct: 242 SDSGMG-RNVFVATSLLDMYVKCG-NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-- 221
           AL+ F  M   N++P  +T+V V  AC+ L   D   LG  +  +SL   + N F+ N  
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALD---LG--IWASSLM--DRNEFLSNPV 352

Query: 222 ---ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
              AL+ MY+K G V  A  +F + + +D V WN ++  LS N            +   G
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEI 305
           I+PD  +   +L  C+H   ++ G++ 
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQF 439



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F   + IH   ++L L +D Y+ N ++      G    SK +F  ++  +   WNTMI G
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                   DA+ L   M        R   +          PN+ T+  VL  C     + 
Sbjct: 89  LVSKDCFDDAIHLYGSM--------RGGGF---------LPNNFTIPFVLKACARKLDVR 131

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G +IH+  ++     DV V ++L+ +Y KC   + A +VFD +P +NV++W  II  Y 
Sbjct: 132 LGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYI 191

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G  +E +   K ++  G     +KP+  + + + AAC+  G  + G +   +   D G
Sbjct: 192 SSGHFREAIGAFKKLLEMG-----LKPDSFSLVKVLAACARLGDCTSG-EWIDRYISDSG 245

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           +  +      ++D+  + G +E A  + + MP +     +WS+++
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEK--DIVSWSTMI 288


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/754 (35%), Positives = 426/754 (56%), Gaps = 34/754 (4%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           +NS+I      G  + A+  F  M+ S + P  +T      AC+  SR  G   G Q+HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGN--GIQIHG 158

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             +++G   + F+ N+L+  YA+ G +D A+ +F    +R++VSW +++   ++ D   +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218

Query: 267 AV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           AV +F R +    + P+ V++  V+ AC+ LE L+TG++++A+ +RN  +  N  + SAL
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSAL 277

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VDMY  C  ++  +R+FD      + L NAM + Y +     EAL +F  M + +G+ P+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPD 336

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             +M S + +C +       +  HG+ ++ G      + NAL+DMY +  R + +  IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE------------------KNR 487
            M  +  V+WN+++ GY    ++G+        + M E+                  +  
Sbjct: 397 RMSNKTVVTWNSIVAGYV---ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
             V+   ++      + +T+M++   CG L AL   K I+ Y  +N +  DV +G+ LVD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           M+++CG    A  +F+ +  R+V  W   I A  M G  +  +EL  +M+ +G     +K
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG-----LK 568

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ V F+    ACSH G+V +G ++FY M   +G+ P   HY C+VDLLGRAG +E+A Q
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  MP E +    W+SLL ACR+  NVE+   AA+ + +L P+    YVLLSN+Y+SA 
Sbjct: 629 LIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+    VR  MKE G+RK PG S I+   + H+F +GD SH +   +   L+ +S+R  
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
             G+VPD S VL +V+E+EK  +L  HSEKLA+A+G++++  GTTIR+ KNLRVC+DCH 
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
             KF SK+ +REIILRD  RFH+ + G CSCGD+
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 272/576 (47%), Gaps = 68/576 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A S    EAIL ++ M  S I PD + FP  L A A  +    G QIH  +VK GY
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA- 167
               + V N+LV+ Y +CG ++    KVFD ++E++ VSW SMI   C + + D A +A 
Sbjct: 166 A-KDLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMI---CGYARRDFAKDAV 220

Query: 168 ---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              FRM+    V P+S T+V V  AC+ L   + L  G +V+      G E N  +++AL
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKL---EDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K   +D AK LF  +   +L   N + S+  +     EA+     M   G++PD 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILI-DNSFVGSALVDMYCNCREVECGRRVF 342
           +S+ S + +CS L  +  GK  H Y LRN     DN  + +AL+DMY  C   +   R+F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIF 395

Query: 343 DFISDKKIALWNAMITGYGQN-EYD------------------------------EEALM 371
           D +S+K +  WN+++ GY +N E D                              EEA+ 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M+   G+  +  TM S+  AC    A    + I+ +  K G+  D  +   L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           SR G  E + +IF+ +  RD  +W   I    + G    A+ L  +M             
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM------------- 562

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMY 549
            +++ +   KP+ +  +  L  C     + +GKEI    ++   +   DV  G  +VD+ 
Sbjct: 563 -IEQGL---KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLL 617

Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            + G L  A ++ + MP+  N + WN ++ A  + G
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 226/514 (43%), Gaps = 80/514 (15%)

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           VA +C  L  R+ L   ++V  NS   G    F+ N+L+  YA  G  ++A         
Sbjct: 71  VARSCE-LGTRESLSFAKEVFENSESYG--TCFMYNSLIRGYASSGLCNEA--------- 118

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
                                 ++FLR M   GI PD  +    L AC+       G +I
Sbjct: 119 ---------------------ILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQI 156

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H   ++     D  FV ++LV  Y  C E++  R+VFD +S++ +  W +MI GY + ++
Sbjct: 157 HGLIVKMGYAKD-LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            ++A+ LF +M     + PN+ TM  V+ AC + E     E ++      G+  +  + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           AL+DMY +   I+++K +FD+    +    N M + Y   G   +AL +   M       
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM------- 328

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                  +D  V   +P+ I++++ +  C  L  +  GK  H Y +RN   +   + +AL
Sbjct: 329 -------MDSGV---RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM--------- 596
           +DMY KC   + A R+FD M  + V+TWN I+  Y  +GE     E  + M         
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438

Query: 597 -----VAEGSRGGE-------------VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
                + +GS   E             V  + VT +++ +AC H G +     ++Y ++ 
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           + GI+        +VD+  R G  E A  + N +
Sbjct: 499 N-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/659 (38%), Positives = 378/659 (57%), Gaps = 55/659 (8%)

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQM----ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           SW   +   +   +FL A+    QM    A R   P   S+ + L +C+ L +      +
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVP--ASLPAALKSCAGLGLCTLAASL 71

Query: 306 HAYALRNDILIDNSFVGSALVDMYCN--------------------CREVECGRRVFDFI 345
           HA A+R+    D  F  +AL+++                           E  R+VFD +
Sbjct: 72  HALAIRSGSFADR-FTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 130

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            ++    WN +I G  +++  +EAL +  +M    G  P+  T+S+V+P  + +E    K
Sbjct: 131 LERDAVSWNTLILGCAEHKRHQEALSMVREMWR-DGFMPDTFTLSTVLP--IFAECADIK 187

Query: 406 EG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
            G  +HG+AIK G   D +V ++L+DMY+   +++ S  +FD     D V WN+M+ GY 
Sbjct: 188 RGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYA 247

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G   +AL + R M                +  +RP P  +T  +++P  G LS L  G
Sbjct: 248 QNGSVEEALGIFRRML---------------QAGVRPVP--VTFSSLIPAFGNLSLLRLG 290

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K++HAY IR     ++ + S+L+DMY KCG ++ ARRVF+ +   ++++W  +IM Y +H
Sbjct: 291 KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALH 350

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G   E   L + M       G VKPN +TF+A+  ACSH+G+V  G   F  M + YG  
Sbjct: 351 GPTTEAFVLFERM-----ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFV 405

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           PS +H A + D LGRAG +++AY  I+ M  +   +  WS+LL ACR+H+N  + E  A+
Sbjct: 406 PSLEHCAALADTLGRAGDLDEAYNFISEMKIK-PTSSVWSTLLRACRVHKNTVLAEEVAK 464

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            +F LEP     +V+LSN+YS++  W++A  +RK M+  G++KEP CSWIE  +++H F+
Sbjct: 465 KIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFI 524

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           A D SH   +++   L   SE+M ++GYVP+   VL ++ EE+K  +LCGHSEKLAI FG
Sbjct: 525 AHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFG 584

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           I++TPPGTTIRV KNLRVC DCH ATKFISKI +REI++RDV RFH FK+G CSCGD+W
Sbjct: 585 IISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 231/459 (50%), Gaps = 43/459 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDN---FAFPAVLKAVAGIQDLSLGKQIH 100
           SW   +R  A   QF  AI  +++M R+ + P +    + PA LK+ AG+   +L   +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 101 AHVVKYGYGLSSVTVANTLVNM----------YGKCG---------SDMWDVYKVFDRIT 141
           A  ++ G      T AN L+N+          +G  G         +    + KVFD + 
Sbjct: 73  ALAIRSGSFADRFT-ANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEML 131

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA---LACSNLSRRDG 198
           E+D VSWN++I       +   AL   R M      P +FTL +V      C+++ R   
Sbjct: 132 ERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR--- 188

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
              G  VHG +++ G + + F+ ++L+ MYA   ++D +  +F SF D D V WN++++ 
Sbjct: 189 ---GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAG 245

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +QN    EA+   R+M   G++P  V+ +S++PA  +L +L  GK++HAY +R     D
Sbjct: 246 YAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR-FND 304

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N F+ S+L+DMYC C  V+  RRVF+ I    I  W AMI GY  +    EA +LF +M 
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM- 363

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMG 435
           E+  + PN  T  +V+ AC  +    D    + +++    G    +++  AL D   R G
Sbjct: 364 ELGNVKPNHITFLAVLTACSHA-GLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAG 422

Query: 436 RIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALM 473
            ++ +     +M+++ T S W+T++     C  H + ++
Sbjct: 423 DLDEAYNFISEMKIKPTSSVWSTLLRA---CRVHKNTVL 458


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/609 (39%), Positives = 355/609 (58%), Gaps = 26/609 (4%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           MAL G         + + AC     L  G+++HA  +         F+G+ LV MY  C 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYR-PAVFLGTRLVTMYVRCG 59

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++  R V D + ++ +  W  MI+GY Q E   EAL LFIKM   AG  PN  T+++V+
Sbjct: 60  ALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR-AGCIPNEYTLATVL 118

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            +C   ++    + +H   +K       +V ++L+DMY++   I+ ++ +FD +  RD V
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 178

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           S   +I+GY   G   +AL L R++ +   +                  N +T  T++  
Sbjct: 179 SCTAIISGYAQKGLDEEALDLFRQLYSEGMQ-----------------CNHVTFTTLVTA 221

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L++L  GK++HA  +R  L   V + ++L+DMY+KCG L ++RRVFD M  R+V++W
Sbjct: 222 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 281

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N ++M YG HG G EV+ L K++        EVKP+ VT +A+ + CSH G+V EG+D+F
Sbjct: 282 NAMLMGYGRHGLGHEVISLFKDL------HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIF 335

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             +  +        HY C++DLLGR+G++E A  LI  MP E      W SLLGACR+H 
Sbjct: 336 DTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE-STPSIWGSLLGACRVHA 394

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NV +GE+ AQ L  +EP+ A +YV+LSNIY++A +W     VRK M E  V KEPG SWI
Sbjct: 395 NVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 454

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
                IH F + +  H   + ++  ++ +   ++  G+VPD SCVLH+V++E+KE +L G
Sbjct: 455 ILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLG 514

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAI FG++NTPPG TIRV KNLR+C DCH   KF+SK+  REI LRD  RFH   +
Sbjct: 515 HSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTH 574

Query: 874 GTCSCGDYW 882
           G C+CGDYW
Sbjct: 575 GNCTCGDYW 583



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 210/413 (50%), Gaps = 28/413 (6%)

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R  L  GRQVH   +        F+   L+ MY + G +DDA+ +     +R +VSW T+
Sbjct: 23  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 82

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S  SQ ++ +EA+    +M   G  P+  ++A+VL +CS  + +  GK++H+  ++ + 
Sbjct: 83  ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN- 141

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              + FVGS+L+DMY     ++  RRVFD + ++ +    A+I+GY Q   DEEAL LF 
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           ++    G+  N  T +++V A     +    + +H   ++  L     +QN+L+DMYS+ 
Sbjct: 202 QLYS-EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKC 260

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G++  S+ +FD+M  R  VSWN M+ GY   G+HG    ++   +++ +E          
Sbjct: 261 GKLLYSRRVFDNMLERSVVSWNAMLMGY---GRHGLGHEVISLFKDLHKE---------- 307

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKC 552
                 KP+S+TL+ VL GC     + +G +I    ++   A  +  G    ++D+  + 
Sbjct: 308 -----VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSAL-LHTGHYGCIIDLLGRS 361

Query: 553 GCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
           G L  A  + + MP  +  + W  ++ A  +H     G+ V + L  M  E +
Sbjct: 362 GRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENA 414



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 212/418 (50%), Gaps = 19/418 (4%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A + A    + L  G+Q+HA ++   Y   +V +   LV MY +CG+ + D   V DR
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYR-PAVFLGTRLVTMYVRCGA-LDDARNVLDR 70

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + E+  VSW +MI+   +  +   AL+ F  ML +   P+ +TL +V  +CS       +
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG---PQSI 127

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+QVH   ++   E + F+ ++L+ MYAK   + +A+ +F +  +RD+VS   I+S  
Sbjct: 128 YQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGY 187

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +Q     EA+   RQ+   G++ + V+  +++ A S L  LD GK++HA  LR ++    
Sbjct: 188 AQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPF-- 245

Query: 319 SFVG--SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            FV   ++L+DMY  C ++   RRVFD + ++ +  WNAM+ GYG++    E + LF  +
Sbjct: 246 -FVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 304

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG---LGRDRYVQNALMDMYSR 433
            +   + P++ T+ +V+  C       +   I    +K     L    Y    ++D+  R
Sbjct: 305 HK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY--GCIIDLLGR 360

Query: 434 MGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            GR+E +  + ++M    T S W +++    +        ++ +++  ME E   N V
Sbjct: 361 SGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 145/264 (54%), Gaps = 9/264 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++ +  EA+  +I+M R+   P+ +    VL + +G Q +  GKQ+H+ +
Sbjct: 78  SWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLL 137

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK  +  S + V ++L++MY K   ++ +  +VFD + E+D VS  ++I+   + G  + 
Sbjct: 138 VKTNFE-SHMFVGSSLLDMYAK-SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI--MN 221
           AL+ FR +    ++ +  T  ++  A S L+  D    G+QVH   LR  E   F+   N
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD---YGKQVHALILR-KELPFFVALQN 251

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY+K G++  ++ +F +  +R +VSWN ++    ++    E +   + +  + +KP
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKP 310

Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
           D V++ +VL  CSH  ++D G +I
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDI 334


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/803 (34%), Positives = 449/803 (55%), Gaps = 51/803 (6%)

Query: 8   LTLLPSPPLSSLQTHQ---PPATTATSLPLPGS-QTRCKESWIES-LRSEARSNQFREAI 62
           L ++ SP   SL+  +    P    +S PL    QT    S+  + +R       F +AI
Sbjct: 34  LVIVTSPVSCSLRFQKFNYNPIQKWSSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAI 93

Query: 63  LSYIEMTRSDIQPDNFA-FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
             Y++M    ++ + F  FP ++KA  G+ D+  G+QIH HV+K G  L  V+V N+L+ 
Sbjct: 94  GVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGV-LDDVSVVNSLLT 152

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSS 180
           MY KCG  + D  ++F+++ E D VSWN+MI+   +   +  +L  FR M++   + P+ 
Sbjct: 153 MYWKCGV-VEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNR 211

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
              VS  L+CS+L     L  GR++HG  ++ G +   +++++L+ MY K G + +A+ +
Sbjct: 212 VACVSSILSCSSL---QSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENI 268

Query: 240 FKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           F S  D+D V      WN ++S    N  F +A++   +M + GIKPD  ++ S+   CS
Sbjct: 269 FNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCS 328

Query: 295 HLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
               +  GK+IH     + L+N+I ++     +AL+DMY  C ++  G ++F    +  +
Sbjct: 329 ESLDIAFGKQIHGLIFKFGLKNNIRVE-----TALLDMYLKCGDMGTGLKIFRRSQNHNL 383

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
            +W+A+I+   Q+    +AL LF + +   GL  ++  + +V+ AC      P+   IHG
Sbjct: 384 IMWSAVISNCAQSGCPTKALELFYEFKMEDGL-ADSGILVAVLRACSSLTLKPEGMQIHG 442

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            A K+G   D +V +AL+D+Y++   +  SK +F  +  +D VSWN +I+GY       +
Sbjct: 443 LATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADE 502

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL   R+MQ             L+E     +PN++T+  +L  C  LS +   KE+H Y 
Sbjct: 503 ALKAFRDMQ-------------LEEI----RPNTVTIACILSVCAHLSVMTLCKEVHGYL 545

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           IR  L + V+V ++L+  YAKCG +N +   F+ MP RN ++WN II+  GMH    E++
Sbjct: 546 IRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMI 605

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
            L   MVA G     +KP+ VTF A+ +ACSH+G V EG   F  M +D+ ++P  + Y 
Sbjct: 606 VLFDKMVASG-----IKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYT 660

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VDLLGRAG +  AY LI  MP   D    W SLLG+C+ H +  + EI A ++F L P
Sbjct: 661 CMVDLLGRAGHLNQAYDLIMAMPCTPDDR-IWGSLLGSCKNHGDEILAEIVANHIFKLVP 719

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
               + VLL+N+Y +     +   VR ++K+MG++K+PGCSWIE  +  H F+AGD SH 
Sbjct: 720 SSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHS 779

Query: 771 QSEQLHGFLENLSERMRKEGYVP 793
           QS++++  +E+L+  +++ GY+P
Sbjct: 780 QSDEIYAAVESLTTEIKRAGYIP 802


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/658 (37%), Positives = 381/658 (57%), Gaps = 56/658 (8%)

Query: 251 WNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPD-GVSIASVLPACSHLEMLDTGKEIHAY 308
           W   + + +    F +AV +FLR  A    +     S+ + L +C+ L +   G  +HA 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 309 ALRNDILIDNSFVGSALVDMYC-------------------NCREVECGRRVFDFISDKK 349
           A+R+    D  F  +AL+++YC                   +    E  R+VFD + ++ 
Sbjct: 76  AIRSGAFADR-FTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-- 407
           +  WN ++ G  +     EAL    KM    G  P++ T+S+V+P  + +E    K G  
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCR-EGFRPDSFTLSTVLP--IFAECADVKRGLE 191

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +HG A + G   D +V ++L+DMY+   R + S  +FD++ VRD + WN+++ G   C Q
Sbjct: 192 VHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG---CAQ 248

Query: 468 HG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
           +G   +AL + R M                +  +RP P  +T  +++P CG L++L  GK
Sbjct: 249 NGSVEEALGIFRRML---------------QAGVRPVP--VTFSSLIPVCGNLASLRFGK 291

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           ++HAY I      +V + S+L+DMY KCG ++ A  +FD M   +V++W  +IM Y +HG
Sbjct: 292 QLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHG 351

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             +E L L + M       G  KPN +TF+A+  ACSH+G+V +G   F  M + YGI P
Sbjct: 352 PAREALVLFERM-----ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVP 406

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
           + +H+A + D LGRAG++++AY  I+ M  +   A  WS+LL ACR+H+N  + E  A+ 
Sbjct: 407 TLEHFAALADTLGRAGELDEAYNFISKMQIK-PTASVWSTLLRACRVHKNTMLAEEVAKK 465

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +  LEP     +V+LSN+YS++  W++A  +R+ M++ G++K+P CSWIE   ++H F+A
Sbjct: 466 IMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVA 525

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D SH   +++   L   SE+M +EG+VP+T  V  ++ EE K  +LCGHSEKLAI FGI
Sbjct: 526 HDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGI 585

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++TP GT IRV KNLRVC DCH  TKFISK+  REI++RD  RFHHFK+G CSCGD+W
Sbjct: 586 ISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 230/472 (48%), Gaps = 42/472 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDN---FAFPAVLKAVAGIQDLSLGKQIHA 101
           W + +R+ A    F +A+  ++ M R+   P +    + PA LK+ A +   +LG  +HA
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWD------------------VYKVFDRITEK 143
             ++ G   +    AN L+N+Y K      D                  V KVFD + E+
Sbjct: 75  LAIRSG-AFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA---LACSNLSRRDGLR 200
           D VSWN+++      G+   AL   R M      P SFTL +V      C+++ R     
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKR----- 188

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
            G +VHG + R G + + F+ ++L+ MYA   R D +  +F +   RD + WN++++  +
Sbjct: 189 -GLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCA 247

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           QN    EA+   R+M   G++P  V+ +S++P C +L  L  GK++HAY +      DN 
Sbjct: 248 QNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGG-FEDNV 306

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           F+ S+L+DMYC C E+     +FD +S   +  W AMI GY  +    EAL+LF +M E+
Sbjct: 307 FISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM-EL 365

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRI 437
               PN  T  +V+ AC  +    DK   +  ++    G    +++  AL D   R G +
Sbjct: 366 GNAKPNHITFLAVLTACSHA-GLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGEL 424

Query: 438 EISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           + +      M+++ T S W+T++     C  H + ++     + + E + R+
Sbjct: 425 DEAYNFISKMQIKPTASVWSTLLRA---CRVHKNTMLAEEVAKKIMELEPRS 473


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 355/595 (59%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S++ AC+    LD  + IHA+ L       + F+ ++L+ +YC C  V   RRVFD +  
Sbjct: 69  SLITACARYRSLDDARAIHAH-LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPA 127

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W ++I GY QN+  +EAL L   M       PN  T +S++ A   S +    E 
Sbjct: 128 RDMCSWTSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH   +K     D YV +AL+DMY+R GR++++  +FD +E ++ VSWN +I G+   G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
               L++  EMQ       RN            +    T  +V      + AL +GK +H
Sbjct: 247 GETTLLMFAEMQ-------RNGF----------EATHFTYSSVFSAIAGIGALEQGKWVH 289

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++       VG+ ++DMYAK G +  AR+VFD +  ++V+TWN ++ A+  +G G+
Sbjct: 290 AHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR 349

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + M     R   V  N++TF+++  ACSH G+V EG   F  MK+ Y +EP  D
Sbjct: 350 EAVTHFEEM-----RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEID 403

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY  VVDLLGRAG + DA   I  MP +   A  W +LLG+CR+H+N +IG+ AA ++F 
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKMPMK-PTAAVWGALLGSCRMHKNAKIGQFAADHVFE 462

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+PD     VLL NIY+S   WD A  VRK MK  GV+KEP CSW+E  + +H F+A D 
Sbjct: 463 LDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDD 522

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H +SE+++   E +S ++RK GYVP+T  VL +V+E+E++  L  HSEK+A+AF ++N 
Sbjct: 523 THPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINM 582

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G TIR+ KN+R+C DCH A ++ISK+  REI++RD  RFHHF +G+CSCGDYW
Sbjct: 583 PLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 183/370 (49%), Gaps = 22/370 (5%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N+L+ +Y K G V DA+ +F     RD+ SW ++++  +QND   EA+  L  M 
Sbjct: 98  SVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM- 156

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           LRG  KP+G + AS+L A         G++IHA  ++ D   D+ +VGSAL+DMY  C  
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD-WHDDVYVGSALLDMYARCGR 215

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    VFD +  K    WNA+I G+ +    E  L++F +M+   G      T SSV  
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQR-NGFEATHFTYSSVFS 274

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A     A    + +H H IK G     +V N ++DMY++ G +  ++ +FD ++ +D V+
Sbjct: 275 AIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN+M+T +    Q+G    L RE     EE  +  V+           N IT +++L  C
Sbjct: 335 WNSMLTAF---AQYG----LGREAVTHFEEMRKCGVH----------LNQITFLSILTAC 377

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITW 573
                + +GK+         L  ++     +VD+  + G LN A      MP++     W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 574 NVIIMAYGMH 583
             ++ +  MH
Sbjct: 438 GALLGSCRMH 447



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 170/319 (53%), Gaps = 10/319 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + +++ A A  + L   + IHAH+    +   SV + N+L+++Y KCG+ + D  +VFD 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFA-GSVFLDNSLIHLYCKCGA-VADARRVFDG 124

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +D  SW S+IA   +    D AL     ML    +P+ FT  S+ L  +  S   G 
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL-LKAAGASASSG- 182

Query: 200 RLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            +G Q+H  +++  +W  + ++ +AL+ MYA+ GR+D A  +F   E ++ VSWN +++ 
Sbjct: 183 -IGEQIHALTVKY-DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAG 240

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            ++       ++   +M   G +    + +SV  A + +  L+ GK +HA+ +++   + 
Sbjct: 241 FARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL- 299

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           ++FVG+ ++DMY     +   R+VFD +  K +  WN+M+T + Q     EA+  F +M 
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR 359

Query: 378 EVAGLWPNATTMSSVVPAC 396
           +  G+  N  T  S++ AC
Sbjct: 360 KC-GVHLNQITFLSILTAC 377



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 141/263 (53%), Gaps = 8/263 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+++   EA+     M R   +P+ F F ++LKA        +G+QIHA  
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VKY +    V V + L++MY +CG  DM     VFD++  K+ VSWN++IA   R G  +
Sbjct: 192 VKYDWH-DDVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMN 221
             L  F  M  +  E + FT  SV  A + +     L  G+ VH + ++ GE  + F+ N
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG---ALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MYAK G + DA+ +F   + +D+V+WN+++++ +Q     EAV    +M   G+  
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 282 DGVSIASVLPACSHLEMLDTGKE 304
           + ++  S+L ACSH  ++  GK+
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQ 388


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/757 (35%), Positives = 421/757 (55%), Gaps = 31/757 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +    F  A++ +  M  S++ PD + FP V+KA  G+ ++ L K +H    
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +  + + ++L+ +Y   G  + D   +FD +  +D + WN M+    + G ++ A
Sbjct: 205 SMGFHMD-LFIGSSLIKLYTDNGY-IHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F+ M  S V+P+S + V +   C+    R  +R G Q+HG  +R G E +  + N +
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCAT---RGIVRAGIQLHGLVIRSGFESDPTVANTI 319

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G + DA+ +F      D V+WN +++   QN    EAV   + M   G+K D 
Sbjct: 320 ITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDS 379

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++ AS LP+      L   KE+H+Y +R+ +  D  ++ SALVD+Y    +VE   + F 
Sbjct: 380 ITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFD-VYLKSALVDIYFKGGDVEMACKTFQ 438

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
             +   +A+  AMI+GY  N  + EAL LF  + +  G+ PN  TM+SV+PAC    +  
Sbjct: 439 QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQ-EGMVPNCLTMASVLPACAALASLK 497

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + +H   +K GL     V +++  MY++ GR++++   F  M V+D+V WN MI  ++
Sbjct: 498 LGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFS 557

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G+   A+ L R+M                      K +S++L   L  C    AL  G
Sbjct: 558 QNGKPELAIDLFRQMGTSGT-----------------KFDSVSLSATLSACANYPALYYG 600

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           KE+H + +RN   +D  V S L+DMY+KCG L  AR VFD+M  +N ++WN II AYG H
Sbjct: 601 KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNH 660

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G  +E L+L   MV  G     ++P+ VTF+ + +AC H+G+V EG+  F  M ++YGI 
Sbjct: 661 GRPRECLDLFHEMVEAG-----IQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC 715

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
              +H+AC+VDL GRAG++ +A+  I  MP   D AG W SLLGACR+H NVE+ ++A++
Sbjct: 716 ARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPD-AGTWGSLLGACRLHGNVELAKLASK 774

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
           +L  L+P+ + +YVLLSN+++ A  W+  + VR  MKE GV+K PG SWI+     H F 
Sbjct: 775 HLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFS 834

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           A DG H QS +++  L+NL   +RK GYVP     LH
Sbjct: 835 AADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPLH 871



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 176/638 (27%), Positives = 321/638 (50%), Gaps = 57/638 (8%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIHA V+  G    S+T+ + ++ MY  C S   DV  +F R+     + WN +I    
Sbjct: 96  RQIHAKVLVCGMN-GSLTLGSRMLGMYVLCRS-FKDVGNLFCRLQLCYSLPWNWLIRGFS 153

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
             G +D AL  F  ML SNV P  +T   V  AC  L   + + L + VH  +  +G   
Sbjct: 154 MLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGL---NNVPLCKMVHELARSMGFHM 210

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + FI ++L+ +Y   G + DAK LF     RD + WN +++   +N  F  A+   ++M 
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              +KP+ VS   +L  C+   ++  G ++H   +R+    D + V + ++ MY  C  +
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPT-VANTIITMYSKCGNL 329

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R++FD +       WN +I GY QN + +EA+ LF  M   +G+  ++ T +S +P+
Sbjct: 330 FDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAM-VTSGVKLDSITFASFLPS 388

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
            ++S +    + +H + ++ G+  D Y+++AL+D+Y + G +E++   F    + D    
Sbjct: 389 VLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC 448

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             MI+GY + G + +AL L R +              + E ++   PN +T+ +VLP C 
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWL--------------IQEGMV---PNCLTMASVLPACA 491

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           AL++L  GKE+H   ++  L     VGS++  MYAK G L+ A + F  MPV++ + WN+
Sbjct: 492 ALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNL 551

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+++  +G+ +  ++L + M   G+     K + V+  A  +AC++   +  G +L   
Sbjct: 552 MIVSFSQNGKPELAIDLFRQMGTSGT-----KFDSVSLSATLSACANYPALYYGKELHCF 606

Query: 636 MKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA----- 688
           +  +  I    D +  + ++D+  + GK+  A  + +MM  ++    +W+S++ A     
Sbjct: 607 VVRNSFIS---DTFVASTLIDMYSKCGKLALARSVFDMM--DWKNEVSWNSIIAAYGNHG 661

Query: 689 ----C--RIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
               C    H+ VE G         ++PD  +  V++S
Sbjct: 662 RPRECLDLFHEMVEAG---------IQPDHVTFLVIMS 690


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 293/823 (35%), Positives = 461/823 (56%), Gaps = 44/823 (5%)

Query: 72   DIQPDNFAFPAVLKAVAGIQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
            +++P    F +++ A   +   SLG   Q+   V+K G   S + V + LV+ + + G  
Sbjct: 272  ELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCS-SDLYVGSALVSAFARHG-- 327

Query: 130  MWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            M D  K ++  + E++ V+ N +IA L +    + A E F M    +   +  T V +  
Sbjct: 328  MLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDTYVVLLS 386

Query: 189  ACSNLSRRD-GLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
            A +  S  + GLR GR+VH + LR G       + N L+ MYAK G +D A  +F+  E 
Sbjct: 387  AIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEA 446

Query: 246  RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            RD +SWNTI+++L QN     A+M    M    I P   +  S L +C+ L +L  G+++
Sbjct: 447  RDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQL 506

Query: 306  HAYALRNDILIDNSFVGSALVDMYCNC-REVECGRRVFDFISDKKIALWNAMITGYGQNE 364
            H  A++  + +D S V +ALV MY  C R  EC   +F+ +S   +  WN+++     ++
Sbjct: 507  HCDAVKWGLYLDTS-VSNALVKMYGECGRMSECWE-IFNSMSAHDVVSWNSIMGVMASSQ 564

Query: 365  YD-EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
                E++ +F  M + +GL PN  T  + + A          + IH   +K G+  D  V
Sbjct: 565  APITESVQVFSNMMK-SGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAV 623

Query: 424  QNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
             NALM  Y++ G ++  + +F  M   RD +SWN+MI+GY   G   +A+  +  M + E
Sbjct: 624  DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSE 683

Query: 483  EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            +  +                   T   VL  C +++AL +G E+HA+ +R+ L +DVVV 
Sbjct: 684  QMMDH-----------------CTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVE 726

Query: 543  SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            SALVDMY+KCG +++A +VF  M  +N  +WN +I  Y  HG G++ LE+ + M   G  
Sbjct: 727  SALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGE- 785

Query: 603  GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
                 P+ VTF+++ +ACSH+G+V  G+D ++++ +DYGI P  +HY+CV+DLLGRAG++
Sbjct: 786  ----SPDHVTFVSVLSACSHAGLVERGLD-YFELMEDYGILPRIEHYSCVIDLLGRAGEL 840

Query: 663  EDAYQLINMMPPEFDKAGAWSSLLGACRIHQN---VEIGEIAAQNLFLLEPDVASHYVLL 719
            +   + +  MP + +    W ++L AC+  ++   +++G  A++ L  LEP    +YVL 
Sbjct: 841  DKIQEYMKRMPMKPNTL-IWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLS 899

Query: 720  SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
            S  +++   W+     R  MK   V+KE G SW+   D +H F+AGD SH  +++++  L
Sbjct: 900  SKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKL 959

Query: 780  ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
              L +++R  GYVP T  VLH++ EE KE LL  HSEKLA+AF +  +  G  IR+ KNL
Sbjct: 960  NFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNL 1019

Query: 840  RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            RVC DCH A ++IS+I  R+IILRD  RFHHFK+G CSCGDYW
Sbjct: 1020 RVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 179/695 (25%), Positives = 321/695 (46%), Gaps = 63/695 (9%)

Query: 74  QPDNFAFPAVLKAV--AGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC--GSD 129
           +P +F F +VL+A   +G   L    Q+H  V K  +  S+ TV N L++MYG C  G  
Sbjct: 165 RPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEF-TSNTTVCNALISMYGSCSVGPP 223

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN----VEPSSFTLVS 185
           +    +VFD    +D ++WN++++   + G        FR M Y +    + P+  T  S
Sbjct: 224 IL-AQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGS 282

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           +  A    S   GL    Q+    L+ G   + ++ +AL++ +A+ G +D+AK ++   +
Sbjct: 283 LITATYLSSCSLGLL--DQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLK 340

Query: 245 DRDLVSWNTIVSSL---SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           +R+ V+ N +++ L      +   E  M  R  A   +    V ++++    +  + L  
Sbjct: 341 ERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRK 400

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+E+HA+ LR   +     V + LV+MY  C  ++   RVF  +  +    WN +IT   
Sbjct: 401 GREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALD 460

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QN Y E A+M +  M + + + P+     S + +C         + +H  A+K GL  D 
Sbjct: 461 QNGYCEAAMMNYCLMRQNS-IGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDT 519

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V NAL+ MY   GR+     IF+ M   D VSWN+++            +M   +    
Sbjct: 520 SVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM-----------GVMASSQAPIT 568

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
           E  +  +N+           PN +T +  L     LS L  GK+IH+  +++ +  D  V
Sbjct: 569 ESVQVFSNMMKSGLV-----PNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAV 623

Query: 542 GSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            +AL+  YAK G ++   R+F  M   R+ I+WN +I  Y  +G  QE ++ +  M+   
Sbjct: 624 DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHS- 682

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMD-----LFYKMKDDYGIEPSPDHYACVVDL 655
               E   +  TF  +  AC+    +  GM+     L   ++ D  +E +      +VD+
Sbjct: 683 ----EQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESA------LVDM 732

Query: 656 LGRAGKVEDAYQLINMMPP--EFDKAGAWSSLLGACRIH----QNVEIGEIAAQNLFLLE 709
             + G+++ A ++ + M    EF    +W+S++     H    + +EI E   ++     
Sbjct: 733 YSKCGRIDYASKVFHSMSQKNEF----SWNSMISGYARHGLGRKALEIFEEMQES--GES 786

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           PD  +   +LS   S A L ++ +D  + M++ G+
Sbjct: 787 PDHVTFVSVLSAC-SHAGLVERGLDYFELMEDYGI 820



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 214/411 (52%), Gaps = 26/411 (6%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + SW   + +  ++     A+++Y  M ++ I P NFA  + L + AG+  L+ G+
Sbjct: 445 EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQ 504

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H   VK+G  L + +V+N LV MYG+CG  M + +++F+ ++  D VSWNS++  +  
Sbjct: 505 QLHCDAVKWGLYLDT-SVSNALVKMYGECGR-MSECWEIFNSMSAHDVVSWNSIMGVMAS 562

Query: 158 F-GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  +++ F  M+ S + P+  T V+   A + LS    L LG+Q+H   L+ G   
Sbjct: 563 SQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSV---LELGKQIHSVMLKHGVTE 619

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +  + NALM+ YAK G VD  + LF      RD +SWN+++S    N    EA+  +  M
Sbjct: 620 DNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLM 679

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                  D  + + VL AC+ +  L+ G E+HA+ LR+ +  D   V SALVDMY  C  
Sbjct: 680 MHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESD-VVVESALVDMYSKCGR 738

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++   +VF  +S K    WN+MI+GY ++    +AL +F +M+E +G  P+  T  SV+ 
Sbjct: 739 IDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQE-SGESPDHVTFVSVLS 797

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           AC              HA  +  G D +    LM+ Y  + RIE    + D
Sbjct: 798 AC-------------SHAGLVERGLDYF---ELMEDYGILPRIEHYSCVID 832



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 162/614 (26%), Positives = 286/614 (46%), Gaps = 62/614 (10%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           + +H  VVK G     + +AN LVN Y K G+ +    +VFD +  ++ VSW  +I+   
Sbjct: 85  ESLHLEVVKRGL-THDLFLANHLVNSYAK-GARLDAARRVFDGMPGRNAVSWTCLISGHV 142

Query: 157 RFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             G  + A   FR ML       P+SFT  SV  AC + S  D L    QVHG   +   
Sbjct: 143 LSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQD-SGPDRLGFAVQVHGLVSKTEF 201

Query: 214 EWNTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
             NT + NAL++MY    +G    A+ +F +   RDL++WN ++S  ++    +      
Sbjct: 202 TSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLF 261

Query: 272 RQMAL--RGI--KPD-----GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           R M     GI  +P       +  A+ L +CS L +LD   ++    L++    D  +VG
Sbjct: 262 RAMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLD---QLFVRVLKSGCSSD-LYVG 316

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           SALV  +     ++  + ++  + ++     N +I G  + ++ E A  +F+   + A +
Sbjct: 317 SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 376

Query: 383 WPNA--TTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEI 439
             +     +S++       +       +H H ++ G + R   V N L++MY++ G I+ 
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM---LLREMQNMEEEKNRNNVYDLDET 496
           +  +F  ME RD +SWNT+IT     G    A+M   L+R+          N++      
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ----------NSI------ 480

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P++   ++ L  C  L  LA G+++H  A++  L  D  V +ALV MY +CG ++
Sbjct: 481 ----GPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMS 536

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQ----EVLELLKNMVAEGSRGGEVKPNEVT 612
               +F+ M   +V++WN I+   G+    Q    E +++  NM+  G     + PN+VT
Sbjct: 537 ECWEIFNSMSAHDVVSWNSIM---GVMASSQAPITESVQVFSNMMKSG-----LVPNKVT 588

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F+   AA +   ++  G  +   M   +G+         ++    ++G V+   +L + M
Sbjct: 589 FVNFLAALTPLSVLELGKQIHSVML-KHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647

Query: 673 PPEFDKAGAWSSLL 686
               D A +W+S++
Sbjct: 648 SGRRD-AISWNSMI 660



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 221/488 (45%), Gaps = 44/488 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N L+  YAK  R+D A+ +F     R+ VSW  ++S    +    +A    R M 
Sbjct: 99  DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAM- 157

Query: 276 LR---GIKPDGVSIASVLPAC--SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY- 329
           LR   G +P   +  SVL AC  S  + L    ++H    + +    N+ V +AL+ MY 
Sbjct: 158 LREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTE-FTSNTTVCNALISMYG 216

Query: 330 -CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVAG--LWPN 385
            C+       +RVFD    + +  WNA+++ Y +         LF  M+ + +G  L P 
Sbjct: 217 SCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPT 276

Query: 386 ATTMSSVVPACVRSE-AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
             T  S++ A   S  +    + +    +K G   D YV +AL+  ++R G ++ +K I+
Sbjct: 277 EHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIY 336

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDA----LMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             ++ R+ V+ N +I G  +  QHG+A     M  R                 D   +  
Sbjct: 337 LGLKERNAVTLNGLIAGL-VKQQHGEAAAEIFMGAR-----------------DSAAVNV 378

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFAR 559
               + L  +     A   L KG+E+HA+ +R   +   + V + LV+MYAKCG ++ A 
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RVF LM  R+ I+WN II A   +G  +  +     M     R   + P+    I+  ++
Sbjct: 439 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLM-----RQNSIGPSNFAAISGLSS 493

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+  G+++ G  L       +G+         +V + G  G++ + +++ N M       
Sbjct: 494 CAGLGLLAAGQQLHCDAV-KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH--DV 550

Query: 680 GAWSSLLG 687
            +W+S++G
Sbjct: 551 VSWNSIMG 558



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 191/449 (42%), Gaps = 74/449 (16%)

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           LRG +P         P   HLE++  G            L  + F+ + LV+ Y     +
Sbjct: 73  LRGRRPG----CDASPESLHLEVVKRG------------LTHDLFLANHLVNSYAKGARL 116

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVP 394
           +  RRVFD +  +    W  +I+G+  +   E+A  LF  M  E  G  P + T  SV+ 
Sbjct: 117 DAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLR 176

Query: 395 ACVRSEAFPDKEG----IHGHAIKLGLGRDRYVQNALMDMYS--RMGRIEISKTIFDDME 448
           AC   ++ PD+ G    +HG   K     +  V NAL+ MY    +G   +++ +FD   
Sbjct: 177 AC--QDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTP 234

Query: 449 VRDTVSWNTMITGYTICGQHGDAL---MLLREMQNMEEEKNRNNVYDLDETVLRPKPN-- 503
           VRD ++WN +++ Y    + GDA+    L R MQ           YD     LRP  +  
Sbjct: 235 VRDLITWNALMSVY---AKRGDAICTFTLFRAMQ-----------YDDSGIELRPTEHTF 280

Query: 504 -SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            S+   T L  C    +L    ++    +++  ++D+ VGSALV  +A+ G L+ A+ ++
Sbjct: 281 GSLITATYLSSC----SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIY 336

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
             +  RN +T N +I        G+   E+       G+R      N  T++ L +A + 
Sbjct: 337 LGLKERNAVTLNGLIAGLVKQQHGEAAAEIFM-----GAR-DSAAVNVDTYVVLLSAIAE 390

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
                +G+                + +A V+    RAG +     + N +   + K GA 
Sbjct: 391 FSTAEQGL------------RKGREVHAHVL----RAGHIYRKIAVSNGLVNMYAKCGAI 434

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
                ACR+ Q +E  +  + N  +   D
Sbjct: 435 DK---ACRVFQLMEARDRISWNTIITALD 460



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 499 RPKPNS-ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           RP P++ + L    PGC A       + +H   ++  L  D+ + + LV+ YAK   L+ 
Sbjct: 64  RPHPHADVLLRGRRPGCDA-----SPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDA 118

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           ARRVFD MP RN ++W  +I  + + G  ++   L + M+ EG      +P   TF ++ 
Sbjct: 119 ARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGP---GCRPTSFTFGSVL 175

Query: 618 AACSHSG 624
            AC  SG
Sbjct: 176 RACQDSG 182


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 298/836 (35%), Positives = 449/836 (53%), Gaps = 60/836 (7%)

Query: 70  RSDIQPDNFAFPAVLKAVA-GIQDLSLGKQIHAHVVK---YGYGLS-SVTVANTLVNMYG 124
           R++ +P+     AVL A+A G    S   +  A +V     G  L   + VA  L++ YG
Sbjct: 118 RAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYG 177

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMI-ATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           KCG  +    +VF RI   D + WN+ I A      + D AL   R M    + P+  + 
Sbjct: 178 KCGC-VESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASF 236

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKS 242
           V++  +C + S    L L R +H     +G   +  +  AL+ MY + G VD++  +F++
Sbjct: 237 VAILSSCGDHS---SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEA 293

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
              R+ VSWN ++++ +Q      A     +M   G +P+ ++  + L A       D G
Sbjct: 294 MAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLG 353

Query: 303 KE--IHAY----ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           +   +H +     L  D++     VG+ALV MY +   ++  R  FD I  K I  WNAM
Sbjct: 354 ESAALHGWIACAGLEGDVM-----VGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 408

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           +T YG N    EA+ LF  M+    L PN  +  +V+  C   E   +   IH   +  G
Sbjct: 409 LTAYGDNGRAREAMELFAAMKR-QSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNG 464

Query: 417 L-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           L  ++  + N ++ M++R G +E +   FD   V+D+VSWNT +   +      D    +
Sbjct: 465 LFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALS---AREDLHGAI 521

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH---AYAIR 532
                M+ E  R              P+  TL++V+  C  L  L  G+ I    + AI 
Sbjct: 522 TAFYTMQHEGFR--------------PDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIE 567

Query: 533 NMLATDVVVGSALVDMYAKCGC-LNFARRVFDLMP--VRNVITWNVIIMAYGMHGEGQEV 589
             +  DVVV SA+++M AKCG  ++   R+F  MP   ++++ WN +I AY  HG G++ 
Sbjct: 568 --VERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKA 625

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP-DH 648
           L+L + M    S    V+P+  TF+++ + CSH+G+V +G+  F+  ++  GIE  P +H
Sbjct: 626 LKLFRIMQQRSS----VRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEH 681

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YAC+VD+LGR G + +A   I  MP   D    W+SLLGAC  + ++E GE AA+    L
Sbjct: 682 YACLVDVLGRMGYLREAEDFIRKMPLPADSV-VWTSLLGACSSYGDLEGGERAARAFIEL 740

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE-PGCSWIEFGDEIHKFLAGDG 767
               +  YV+LSNIY++A  W+ ++ VR+ M E  V+K  PG S I   + +H+F A D 
Sbjct: 741 YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDR 800

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH QS++++  LE L   +R+ GYVPDT  VLH+V EE+KE LL  HSEKLAIAFG+++ 
Sbjct: 801 SHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISV 860

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF-KNGTCSCGDYW 882
           P   +IRV KNLRVC DCH ATKFI+++  REI +RD  RFHHF K+G CSCGDYW
Sbjct: 861 PHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 285/625 (45%), Gaps = 44/625 (7%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
              +L+   G  DL+ G+Q+H  +VK G   + + + N LV MY KC S + D    F  
Sbjct: 27  LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDL-LGNYLVQMYSKCRS-LDDANAAFSA 84

Query: 140 ITEKDQVSWNSMIATLCRFGK-WDLALEAFRMMLYSNVE--PSSFTLVSV--ALACSNLS 194
           +  +   +WN++IA        +DL     RM L    E  P+  T+++V  A+A  + S
Sbjct: 85  LRSRGIATWNTLIAAQSSPAAVFDLYT---RMKLEERAENRPNRLTIIAVLGAIASGDPS 141

Query: 195 RRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                R   ++  + +R    E + F+  AL+  Y K G V+ A  +F   +  DL+ WN
Sbjct: 142 SSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 201

Query: 253 TIVSSLSQNDKFLE-AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             + + + ND+  + A++ +R+M L G+ P+  S  ++L +C     L   + IHA    
Sbjct: 202 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 261

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              L D   V +ALV MY  C  V+    VF+ ++ +    WNAMI  + Q  +   A  
Sbjct: 262 LGFLGD-VVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFA 320

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEA--FPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           ++ +M++  G  PN  T  + + A   S +    +   +HG     GL  D  V  AL+ 
Sbjct: 321 IYWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 379

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY   G I+ ++  FD +  ++ VSWN M+T Y   G+  +A+ L   M+          
Sbjct: 380 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQS------- 432

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDM 548
                       PN ++ + VL  C  +S   + + IHA  + N + A +  + + +V M
Sbjct: 433 ----------LAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRM 479

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           +A+ G L  A   FD   V++ ++WN  + A     +    +     M  EG R     P
Sbjct: 480 FARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFR-----P 534

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG-KVEDAYQ 667
           ++ T +++   C+  G +  G  +  ++     +E      + V++++ + G  V++  +
Sbjct: 535 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECER 594

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH 692
           L   MP +     AW++++ A   H
Sbjct: 595 LFARMPDDRKDLVAWNTMIAAYAQH 619



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 241/535 (45%), Gaps = 35/535 (6%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+L    M    + P+  +F A+L +      L L + IHA V + G+ L  V VA  LV
Sbjct: 217 ALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGF-LGDVVVATALV 275

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            MYG+CGS + +   VF+ +  ++ VSWN+MIA   + G    A   +  M      P+ 
Sbjct: 276 TMYGRCGS-VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNK 334

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            T V+   A  + S +D L     +HG     G E +  +  AL+ MY   G +D A+  
Sbjct: 335 ITFVTALKAACSSSSQD-LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAA 393

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F +   +++VSWN ++++   N +  EA+     M  + + P+ VS  +VL  C   E +
Sbjct: 394 FDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDV 450

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              + IHA  + N +    S + + +V M+     +E     FD    K    WN  +  
Sbjct: 451 SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAA 510

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH-AIKLGLG 418
               E    A+  F  M+   G  P+  T+ SVV  C           I    +  + + 
Sbjct: 511 LSAREDLHGAITAFYTMQH-EGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 569

Query: 419 RDRYVQNALMDMYSRMG-RIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLL 475
           RD  V++A+M+M ++ G  ++  + +F  M  + +D V+WNTMI  Y   G    AL L 
Sbjct: 570 RDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 629

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNM 534
           R MQ       R++V          +P+S T ++VL GC     +  G  IH + + R +
Sbjct: 630 RIMQ------QRSSV----------RPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREV 671

Query: 535 LATD---VVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGE 585
           L  +   V   + LVD+  + G L  A      MP+  + + W  ++ A   +G+
Sbjct: 672 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGD 726



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 209/442 (47%), Gaps = 31/442 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHA 101
           SW   + + A+      A   Y  M +   +P+   F   LKA   +  QDL     +H 
Sbjct: 301 SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHG 360

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            +   G     V V   LV MYG  G+ +      FD I  K+ VSWN+M+      G+ 
Sbjct: 361 WIACAGLE-GDVMVGTALVTMYGSTGA-IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRA 418

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
             A+E F  M   ++ P+  + ++V   C ++S  +   +  +V GN L   E  + I N
Sbjct: 419 REAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS--EARSIHAEVVGNGLFAQE--SSIAN 474

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ M+A+ G +++A   F +   +D VSWNT V++LS  +    A+     M   G +P
Sbjct: 475 GVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRP 534

Query: 282 DGVSIASVLPACSHLEMLDTGKEIH-----AYALRNDILIDNSFVGSALVDMYCNC-REV 335
           D  ++ SV+  C+ L  L+ G+ I      A  +  D++++     SA+++M   C   V
Sbjct: 535 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVE-----SAVMNMVAKCGSSV 589

Query: 336 ECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           +   R+F  + D  K +  WN MI  Y Q+ +  +AL LF  M++ + + P+++T  SV+
Sbjct: 590 DECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVL 649

Query: 394 PACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEV 449
             C  S A   ++GIH   +    LG+ +      A L+D+  RMG +  ++     M +
Sbjct: 650 SGC--SHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPL 707

Query: 450 -RDTVSWNTMITGYTICGQHGD 470
             D+V W +++     C  +GD
Sbjct: 708 PADSVVWTSLLGA---CSSYGD 726



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 36/295 (12%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T++ ++  C+          +H   +K GL R+  + N L+ MYS+   ++ +   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             R   +WNT+I   +      D   L   M+  E  +NR              PN +T+
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFD---LYTRMKLEERAENR--------------PNRLTI 128

Query: 508 MTVLPGCGALSA---------LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           + VL   GA+++          A+ + +H     + L  D+ V +AL+D Y KCGC+  A
Sbjct: 129 IAVL---GAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESA 185

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQE-VLELLKNMVAEGSRGGEVKPNEVTFIALF 617
             VF  + V ++I WN  IMA   + E  +  L L++ M  EG     + PN  +F+A+ 
Sbjct: 186 LEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEG-----LLPNRASFVAIL 240

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           ++C     +     +  ++ ++ G          +V + GR G V+++  +   M
Sbjct: 241 SSCGDHSSLPLARSIHARV-EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAM 294


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/722 (33%), Positives = 407/722 (56%), Gaps = 31/722 (4%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA--KLGRVD 234
           P +  L+S+   C ++ +       +QVH  +++ G   N  + N +M      + G   
Sbjct: 16  PPTHPLISLLETCESMDQL------QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+ LF    + +L  WNT++   S+ D     V    +M  RG+KPD  +   +    +
Sbjct: 70  YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 129

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
               L+ G+++H + L++ +   N FV +ALV MY  C +++  R VFD      +  WN
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQY-NVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            +I+ Y +    EE+  LF+ ME+   L P   T+  V+ AC + +     + +H +   
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVL-PTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 247

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
             +  +  ++NA++DMY+  G ++ +  IF  M  RD +SW T+++G+T  G+   A   
Sbjct: 248 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 307

Query: 475 LREMQN--------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGALSAL 520
             +M          M +   R+N +     + R       KP+  T+++VL  C  L AL
Sbjct: 308 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 367

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+ I  Y  RN +  D+ V +AL+DMY KCG ++ A  +F  M  R+  TW  +I+  
Sbjct: 368 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 427

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            ++G G++ L++  NM+        + P+E+T+I + +AC+H+G+V +G   F +M   +
Sbjct: 428 AVNGHGEKALDMFSNMLK-----ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 482

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GIEP+  HY C+VDLL RAG++++AY++I  MP + +    W +LL  CR+++  ++ E+
Sbjct: 483 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI-VWGALLAGCRVYRESDMAEM 541

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
             + +  LEPD  + YVLL NIY++ + W+   ++R+ M + G++K PGCS IE    +H
Sbjct: 542 VVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVH 601

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F+AGD SH Q++ +   L+ +++ ++  GY PD S V  ++ EE+KE  +  HSEKLAI
Sbjct: 602 EFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAI 661

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG++N+PPG TIR+ KNLR+C DCH   K +SK+ +RE+I+RD  RFHHFK+G CSC D
Sbjct: 662 AFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKD 721

Query: 881 YW 882
           YW
Sbjct: 722 YW 723



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 265/587 (45%), Gaps = 69/587 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+H   +K G   + V     +         D     ++FD I E +   WN+MI    
Sbjct: 35  QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 94

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R     L +  +  ML   V+P  +T           +R   L  GRQ+HG+ L+ G ++
Sbjct: 95  RLDFPQLGVSLYLEMLRRGVKPDRYTF---PFLFKGFTRDIALEYGRQLHGHVLKHGLQY 151

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+  AL+ MY   G++D A+ +F      D+++WN I+S+ ++  KF E+      M 
Sbjct: 152 NVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVME 211

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--- 332
            + + P  V++  VL ACS L+ L TGK++H+Y ++N  +  N  + +A++DMY +C   
Sbjct: 212 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEM 270

Query: 333 ----------------------------REVECGRRVFDFISDKKIALWNAMITGYGQNE 364
                                        E++  R  FD + +K    W AMI GY ++ 
Sbjct: 271 DSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSN 330

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             +EAL LF  M +   + P+  TM SV+ AC    A    E I  +  +  +  D +V+
Sbjct: 331 RFKEALELFRNM-QATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 389

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NAL+DMY + G ++ +++IF +M  RD  +W  MI G  + G    AL +   M      
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM------ 443

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR----NMLATDVV 540
                   L  ++L   P+ IT + VL  C     + KG++   Y +R    + +  ++ 
Sbjct: 444 --------LKASIL---PDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIA 489

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
               LVD+ A+ G L  A  V + MP++ N I W  ++    ++ E      ++K ++  
Sbjct: 490 HYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL 549

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               G V    V    ++AAC     + E      +M  D GI+ +P
Sbjct: 550 EPDNGAVY---VLLCNIYAACKRWNDLRE----LRQMMMDKGIKKTP 589



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 240/489 (49%), Gaps = 55/489 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R +  +  +  Y+EM R  ++PD + FP + K       L  G+Q+H HV+
Sbjct: 86  WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+G    +V V   LV MY  CG  +     VFD   + D ++WN +I+   + GK++ +
Sbjct: 146 KHGLQY-NVFVHTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKVGKFEES 203

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNA 222
              F +M    V P++ TLV V  ACS L     LR G++VH    + +V E N  + NA
Sbjct: 204 RRLFLVMEDKQVLPTTVTLVLVLSACSKLK---DLRTGKKVHSYVKNCKV-ESNLVLENA 259

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS----------------------- 259
           ++ MYA  G +D A  +F+S  +RD++SW TIVS  +                       
Sbjct: 260 MIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSW 319

Query: 260 --------QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
                   ++++F EA+   R M    +KPD  ++ SVL AC+HL  L+ G+ I  Y  R
Sbjct: 320 TAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR 379

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  D  FV +AL+DMY  C +V+    +F  +S +    W AMI G   N + E+AL 
Sbjct: 380 NKIKND-LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 438

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK------EGIHGHAIKLGLGRDRYVQN 425
           +F  M + A + P+  T   V+ AC  +    DK           H I+  +        
Sbjct: 439 MFSNMLK-ASILPDEITYIGVLSACTHT-GLVDKGRKYFLRMTSQHGIEPNIAH----YG 492

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            L+D+ +R GR++ +  + ++M ++ +++ W  ++ G  +  +   A M+++++  +E E
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI--LELE 550

Query: 485 KNRNNVYDL 493
            +   VY L
Sbjct: 551 PDNGAVYVL 559



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 60/310 (19%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +  +  +F E+   ++ M    + P       VL A + ++DL  GK++H++ 
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY- 244

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS--------------DM--W-------------DVY 134
           VK     S++ + N +++MY  CG               D+  W             DV 
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 304

Query: 135 K-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           +  FD++ EKD VSW +MI    R  ++  ALE FR M  +NV+P  FT+VSV  AC++L
Sbjct: 305 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 364

Query: 194 SRRDGLRLGRQVHGNSLRVGEW------------NTFIMNALMAMYAKLGRVDDAKTLFK 241
                          +L +GEW            + F+ NAL+ MY K G VD A+++F+
Sbjct: 365 G--------------ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFR 410

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               RD  +W  ++  L+ N    +A+     M    I PD ++   VL AC+H  ++D 
Sbjct: 411 EMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDK 470

Query: 302 GKEIHAYALR 311
           G++   Y LR
Sbjct: 471 GRK---YFLR 477



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 129/260 (49%), Gaps = 20/260 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    RSN+F+EA+  +  M  ++++PD F   +VL A A +  L LG+ I  ++
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +     + + V N L++MY KCG D+     +F  ++++D+ +W +MI  L   G  + 
Sbjct: 378 DRNKIK-NDLFVRNALIDMYFKCG-DVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 435

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNL-----SRRDGLRLGRQVHGNSLRVGEWNTF 218
           AL+ F  ML +++ P   T + V  AC++       R+  LR+  Q HG    +  +   
Sbjct: 436 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ-HGIEPNIAHY--- 491

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
               L+ + A+ GR+ +A  + ++   + + + W  +++      +   A M ++Q+   
Sbjct: 492 --GCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL-- 547

Query: 278 GIKPDG----VSIASVLPAC 293
            ++PD     V + ++  AC
Sbjct: 548 ELEPDNGAVYVLLCNIYAAC 567


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/696 (38%), Positives = 404/696 (58%), Gaps = 34/696 (4%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++ D+  FP VLKA A    +  G++IH  V K G+  S V V NTL+  YG CG  + D
Sbjct: 3   VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFD-SDVFVGNTLLLFYGNCGG-LKD 60

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACS 191
           V +VFD + E+D VSWNS+I      G +  A+  F  M L S   P+  ++VSV   C+
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
            L   DG+  GRQ+H   ++ G +    + NAL+ +Y K G V D++ +F    +R+ VS
Sbjct: 121 GL--EDGVT-GRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVS 177

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN I++SL+  ++  +A+   R M   G+KP+ V+ +S+LP    L++ D GKEIH ++L
Sbjct: 178 WNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSL 237

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           R  +  D  FV +AL+DMY           VF+ I +K I  WNAM+  + QN  +  A+
Sbjct: 238 RFGLESD-IFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAV 296

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            L  +M+   G  PN+ T ++V+PAC R       + IH  AI+ G   D +V NAL DM
Sbjct: 297 DLVRQMQ-ADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDM 355

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++ G + +++ +F  + +RD VS+N +I GY+      ++L L  EM            
Sbjct: 356 YAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEM------------ 402

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                 +   K + ++ M V+  C  L+AL +GKE+H  A+R  L T + + +AL+D Y 
Sbjct: 403 -----GIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYI 457

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG ++ A +VF  +P R+  +WN +I+ YGM GE    + L + M  +G     V+ + 
Sbjct: 458 KCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDG-----VEYDS 512

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           V++IA+ +ACSH G+V EG   F  M+    I+P+  HYAC+VDLLGRAG +E+A +LI 
Sbjct: 513 VSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIE 571

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            +P E D A  W +LLGACRIH  +E+   AA++LF L+P  + +Y +LSN+Y+ A  WD
Sbjct: 572 SLPIEPD-ANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWD 630

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
           +A  VRK MK  G +K PGCSW++  +++H F+AG+
Sbjct: 631 EANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGE 666



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 185/531 (34%), Positives = 290/531 (54%), Gaps = 30/531 (5%)

Query: 58  FREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           + EAI  + EM  RS  +P+  +  +VL   AG++D   G+QIH +VVK G   S VTV 
Sbjct: 89  YAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLD-SQVTVG 147

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N LV++YGKCG  + D  +VFD I+E++ VSWN++I +L    +   ALE FR+M+   V
Sbjct: 148 NALVDVYGKCGY-VKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGV 206

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
           +P+S T  S+      L   D    G+++HG SLR G E + F+ NAL+ MYAK GR   
Sbjct: 207 KPNSVTFSSMLPVLVELKLFD---FGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQ 263

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F    ++++VSWN +V++ +QN   L AV  +RQM   G  P+ V+  +VLPAC+ 
Sbjct: 264 ASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACAR 323

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           +  L  GKEIHA A+R    +D  FV +AL DMY  C  +   RRVF  IS +    +N 
Sbjct: 324 IGFLRPGKEIHARAIRTGSSVD-LFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNI 381

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +I GY Q     E+L LF++M  + G+  +  +   V+ AC    A    + +HG A++ 
Sbjct: 382 LIIGYSQTTNCSESLRLFLEM-GIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRK 440

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
            L    ++ NAL+D Y + GRI+++  +F  +  RDT SWN+MI GY + G+   A+ L 
Sbjct: 441 HLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLF 500

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY-AIRNM 534
             M+    E      YD           S++ + VL  C     + +GK+   +  ++N+
Sbjct: 501 EAMKEDGVE------YD-----------SVSYIAVLSACSHGGLVEEGKKYFEHMQVQNI 543

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
             T +   + +VD+  + G +  A ++ + +P+  +   W  ++ A  +HG
Sbjct: 544 KPTQMHY-ACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHG 593



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 185/355 (52%), Gaps = 23/355 (6%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G++ D  +   VL AC+    +  G+EIH    +     D  FVG+ L+  Y NC  ++ 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSD-VFVGNTLLLFYGNCGGLKD 60

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            +RVFD + ++ +  WN++I  +  + +  EA+ LF +M   +G  PN  ++ SV+P C 
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E       IH + +K GL     V NAL+D+Y + G ++ S+ +FD++  R+ VSWN 
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +IT      ++ DAL + R M              +D  V   KPNS+T  ++LP    L
Sbjct: 181 IITSLAYLERNQDALEMFRLM--------------IDGGV---KPNSVTFSSMLPVLVEL 223

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
                GKEIH +++R  L +D+ V +AL+DMYAK G    A  VF+ +  +N+++WN ++
Sbjct: 224 KLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMV 283

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
             +  +      ++L++ M A+G       PN VTF  +  AC+  G +  G ++
Sbjct: 284 ANFAQNRLELAAVDLVRQMQADGE-----IPNSVTFTNVLPACARIGFLRPGKEI 333



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 215/428 (50%), Gaps = 13/428 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + S A   + ++A+  +  M    ++P++  F ++L  +  ++    GK+IH   
Sbjct: 177 SWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFS 236

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +++G   S + VAN L++MY K G  +     VF++I EK+ VSWN+M+A   +      
Sbjct: 237 LRFGLE-SDIFVANALIDMYAKSGRSL-QASNVFNQIGEKNIVSWNAMVANFAQNRLELA 294

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A++  R M      P+S T  +V  AC   +R   LR G+++H  ++R G   + F+ NA
Sbjct: 295 AVDLVRQMQADGEIPNSVTFTNVLPAC---ARIGFLRPGKEIHARAIRTGSSVDLFVSNA 351

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MYAK G ++ A+ +FK    RD VS+N ++   SQ     E++    +M ++G+K D
Sbjct: 352 LTDMYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLD 410

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            VS   V+ AC++L  L  GKE+H  A+R   L  + F+ +AL+D Y  C  ++   +VF
Sbjct: 411 VVSYMGVISACANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVF 469

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             I  +  A WN+MI GYG       A+ LF  M+E  G+  ++ +  +V+ AC      
Sbjct: 470 RQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKE-DGVEYDSVSYIAVLSACSHGGLV 528

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            + +    H     +   +     ++D+  R G IE +  + + + +  D   W  ++  
Sbjct: 529 EEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGA 588

Query: 462 YTICGQHG 469
              C  HG
Sbjct: 589 ---CRIHG 593


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/717 (35%), Positives = 403/717 (56%), Gaps = 62/717 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F++ ++ +L+ WNT+    
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           + +   + A+     M   G+ P+  +   +L +C+  +    G++IH + L+    +D 
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD- 122

Query: 319 SFVGSALVDMYCNCREVECGRRVFD---------------------FISD---------- 347
            +V ++L+ MY     +E  R+VFD                     +I+           
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  WNAMI+GY +   ++EAL LF +M +   + P+ +TM SVV AC +S +      
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKT-NVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H      G G +  + NAL+D+Y + G +E +  +F+ +  +D +SWNT+I GYT    
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           + +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH
Sbjct: 302 YKEALLLFQEMLRSGES-----------------PNDVTMLSILPACAHLGAIEIGRWIH 344

Query: 528 AYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            Y  + +  +A      ++L+DMYAKCG +  A++VFD +  R++ +WN +I  + MHG 
Sbjct: 345 VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 404

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
                ++   M     R  E++P+++TF+ L +ACSHSGM+  G  +F  MK+DY I P 
Sbjct: 405 ANAAFDIFSRM-----RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 459

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C++DLLG +G  ++A ++IN M  E D    W SLL AC++H NVE+GE  AQNL
Sbjct: 460 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMHGNVELGESYAQNL 518

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             +EP     YVLLSNIY++A  W++   +R  + + G++K PGCS IE    +H+F+ G
Sbjct: 519 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 578

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H ++ +++G LE +   + + G+VPDTS VL  + EE KE  L  HSEKLAIAFG++
Sbjct: 579 DKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 638

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 639 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 235/484 (48%), Gaps = 54/484 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+ + FP +LK+ A  +    G+QIH HV+
Sbjct: 56  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--SDMWDVY---------------------------- 134
           K GY L  + V  +L++MY + G   D   V+                            
Sbjct: 116 KLGYDLD-LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQ 174

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD I  KD VSWN+MI+     G    ALE F+ M+ +NV P   T+VSV  AC   +
Sbjct: 175 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC---A 231

Query: 195 RRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +   + LGRQVH   +    G  N  I+NAL+ +Y K G V+ A  LF+    +D++SWN
Sbjct: 232 QSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 290

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  ++M   G  P+ V++ S+LPAC+HL  ++ G+ IH Y  + 
Sbjct: 291 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 350

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S   ++L+DMY  C ++E  ++VFD I ++ ++ WNAMI G+  +     A  
Sbjct: 351 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 410

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL---- 427
           +F +M +   + P+  T   ++ AC  S          G  I   +  D  +   L    
Sbjct: 411 IFSRMRK-NEIEPDDITFVGLLSACSHSGMLD-----LGRHIFRSMKEDYKITPKLEHYG 464

Query: 428 --MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
             +D+    G  + ++ + + ME+  D V W +++     C  HG+  +     QN+ + 
Sbjct: 465 CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA---CKMHGNVELGESYAQNLIKI 521

Query: 485 KNRN 488
           + +N
Sbjct: 522 EPKN 525



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 144/268 (53%), Gaps = 14/268 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +   +EA+  + EM +++++PD     +V+ A A    + LG+Q+H+ +
Sbjct: 187 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 246

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG ++     +F+ ++ KD +SWN++I        +  
Sbjct: 247 DDHGFG-SNLKIVNALIDLYIKCG-EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA- 222
           AL  F+ ML S   P+  T++S+  AC++L     + +GR +H   + + +    + NA 
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLG---AIEIGRWIH---VYINKRLKGVANAS 358

Query: 223 -----LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                L+ MYAK G ++ A+ +F S  +R L SWN ++   + + +   A     +M   
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 418

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
            I+PD ++   +L ACSH  MLD G+ I
Sbjct: 419 EIEPDDITFVGLLSACSHSGMLDLGRHI 446


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/722 (33%), Positives = 407/722 (56%), Gaps = 31/722 (4%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA--KLGRVD 234
           P +  L+S+   C ++ +       +QVH  +++ G   N  + N +M      + G   
Sbjct: 37  PPTHPLISLLETCESMDQL------QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+ LF    + +L  WNT++   S+ D     V    +M  RG+KPD  +   +    +
Sbjct: 91  YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 150

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
               L+ G+++H + L++ +   N FV +ALV MY  C +++  R VFD      +  WN
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQY-NVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            +I+ Y +    EE+  LF+ ME+   L P   T+  V+ AC + +     + +H +   
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVL-PTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 268

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
             +  +  ++NA++DMY+  G ++ +  IF  M  RD +SW T+++G+T  G+   A   
Sbjct: 269 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 328

Query: 475 LREMQN--------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGALSAL 520
             +M          M +   R+N +     + R       KP+  T+++VL  C  L AL
Sbjct: 329 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 388

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+ I  Y  RN +  D+ V +AL+DMY KCG ++ A  +F  M  R+  TW  +I+  
Sbjct: 389 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGL 448

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            ++G G++ L++  NM+        + P+E+T+I + +AC+H+G+V +G   F +M   +
Sbjct: 449 AVNGHGEKALDMFSNMLK-----ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 503

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GIEP+  HY C+VDLL RAG++++AY++I  MP + +    W +LL  CR+++  ++ E+
Sbjct: 504 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI-VWGALLAGCRVYRESDMAEM 562

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
             + +  LEPD  + YVLL NIY++ + W+   ++R+ M + G++K PGCS IE    +H
Sbjct: 563 VVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVH 622

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F+AGD SH Q++ +   L+ +++ ++  GY PD S V  ++ EE+KE  +  HSEKLAI
Sbjct: 623 EFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAI 682

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG++N+PPG TIR+ KNLR+C DCH   K +SK+ +RE+I+RD  RFHHFK+G CSC D
Sbjct: 683 AFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKD 742

Query: 881 YW 882
           YW
Sbjct: 743 YW 744



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 264/587 (44%), Gaps = 69/587 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+H   +K G   + V     +         D     ++FD I E +   WN+MI    
Sbjct: 56  QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 115

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R     L +  +  ML   V+P  +T           +R   L  GRQ+HG+ L+ G ++
Sbjct: 116 RLDFPQLGVSLYLEMLRRGVKPDRYTF---PFLFKGFTRDIALEYGRQLHGHVLKHGLQY 172

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+  AL+ MY   G++D A+ +F      D+++WN I+S+ ++  KF E+      M 
Sbjct: 173 NVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVME 232

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--- 332
            + + P  V++  VL ACS L+ L TGK++H+Y ++N  +  N  + +A++DMY +C   
Sbjct: 233 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEM 291

Query: 333 ----------------------------REVECGRRVFDFISDKKIALWNAMITGYGQNE 364
                                        E++  R  FD + +K    W AMI GY ++ 
Sbjct: 292 DSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSN 351

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             +EAL LF  M +   + P+  TM SV+ AC    A    E I  +  +  +  D +V+
Sbjct: 352 RFKEALELFRNM-QATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 410

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           NAL+DMY + G ++ +++IF +M  RD  +W  MI G  + G    AL +   M      
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM------ 464

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR----NMLATDVV 540
                   L  ++L   P+ IT + VL  C     + KG++   Y +R    + +  ++ 
Sbjct: 465 --------LKASIL---PDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIA 510

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
               LVD+ A+ G L  A  V + MP++ N I W  ++    ++ E      ++K ++  
Sbjct: 511 HYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL 570

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               G V    V    ++AAC     + E      +M  D GI+  P
Sbjct: 571 EPDNGAVY---VLLCNIYAACKRWNDLRE----LRQMMMDKGIKKXP 610



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 240/489 (49%), Gaps = 55/489 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  +R +  +  +  Y+EM R  ++PD + FP + K       L  G+Q+H HV+
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+G    +V V   LV MY  CG  +     VFD   + D ++WN +I+   + GK++ +
Sbjct: 167 KHGLQY-NVFVHTALVQMYLLCGQ-LDTARGVFDVCPKADVITWNMIISAYNKVGKFEES 224

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNA 222
              F +M    V P++ TLV V  ACS L     LR G++VH    + +V E N  + NA
Sbjct: 225 RRLFLVMEDKQVLPTTVTLVLVLSACSKLK---DLRTGKKVHSYVKNCKV-ESNLVLENA 280

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS----------------------- 259
           ++ MYA  G +D A  +F+S  +RD++SW TIVS  +                       
Sbjct: 281 MIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSW 340

Query: 260 --------QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
                   ++++F EA+   R M    +KPD  ++ SVL AC+HL  L+ G+ I  Y  R
Sbjct: 341 TAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR 400

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  D  FV +AL+DMY  C +V+    +F  +S +    W AMI G   N + E+AL 
Sbjct: 401 NKIKND-LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALD 459

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK------EGIHGHAIKLGLGRDRYVQN 425
           +F  M + A + P+  T   V+ AC  +    DK           H I+  +        
Sbjct: 460 MFSNMLK-ASILPDEITYIGVLSACTHT-GLVDKGRKYFLRMTSQHGIEPNIAH----YG 513

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            L+D+ +R GR++ +  + ++M ++ +++ W  ++ G  +  +   A M+++++  +E E
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI--LELE 571

Query: 485 KNRNNVYDL 493
            +   VY L
Sbjct: 572 PDNGAVYVL 580



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 60/310 (19%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +  +  +F E+   ++ M    + P       VL A + ++DL  GK++H++ 
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY- 265

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS--------------DM--W-------------DVY 134
           VK     S++ + N +++MY  CG               D+  W             DV 
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 325

Query: 135 K-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           +  FD++ EKD VSW +MI    R  ++  ALE FR M  +NV+P  FT+VSV  AC++L
Sbjct: 326 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 385

Query: 194 SRRDGLRLGRQVHGNSLRVGEW------------NTFIMNALMAMYAKLGRVDDAKTLFK 241
                          +L +GEW            + F+ NAL+ MY K G VD A+++F+
Sbjct: 386 G--------------ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFR 431

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               RD  +W  ++  L+ N    +A+     M    I PD ++   VL AC+H  ++D 
Sbjct: 432 EMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDK 491

Query: 302 GKEIHAYALR 311
           G++   Y LR
Sbjct: 492 GRK---YFLR 498



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 129/261 (49%), Gaps = 20/261 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    RSN+F+EA+  +  M  ++++PD F   +VL A A +  L LG+ I  ++
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +     + + V N L++MY KCG D+     +F  ++++D+ +W +MI  L   G  + 
Sbjct: 399 DRNKIK-NDLFVRNALIDMYFKCG-DVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 456

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNL-----SRRDGLRLGRQVHGNSLRVGEWNTF 218
           AL+ F  ML +++ P   T + V  AC++       R+  LR+  Q HG    +  +   
Sbjct: 457 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ-HGIEPNIAHY--- 512

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
               L+ + A+ GR+ +A  + ++   + + + W  +++      +   A M ++Q+   
Sbjct: 513 --GCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL-- 568

Query: 278 GIKPDG----VSIASVLPACS 294
            ++PD     V + ++  AC 
Sbjct: 569 ELEPDNGAVYVLLCNIYAACK 589


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/757 (34%), Positives = 419/757 (55%), Gaps = 44/757 (5%)

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
           RS+++ + +   +VL+  A ++ L  GK++H+ +   G  +  V  A  LV MY  CG D
Sbjct: 52  RSELELNTYC--SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAK-LVFMYVNCG-D 107

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           +    ++FD I       WN +++   + G +  ++  F  M    +   S+T   V   
Sbjct: 108 LVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL-- 165

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
               +    +R  ++VHG  L++G   +N  ++N+L+A Y K G V+ A+ LF    DRD
Sbjct: 166 -KGFAASAKVRECKRVHGYVLKLGFGSYNA-VVNSLIAAYFKCGEVESARILFDELSDRD 223

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +VSWN+++S  + N      + F  QM   G+  D  ++ +VL AC+++  L  G+ +HA
Sbjct: 224 VVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHA 283

Query: 308 YALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           Y ++      ++ +N+     L+DMY  C  +     VF  + +  I  W ++I  + + 
Sbjct: 284 YGVKAGFSGGVMFNNT-----LLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVRE 338

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
               EA+ LF +M+   GL P+   ++SVV AC  S +      +H H  K  +G +  V
Sbjct: 339 GLHYEAIGLFDEMQS-KGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPV 397

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NALM+MY++ G +E +  IF  + V++ VSWNTMI GY+      +AL L  +MQ    
Sbjct: 398 SNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK--- 454

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                          + KP+ +T+  VLP C  L+AL KG+EIH + +R    +D+ V  
Sbjct: 455 ---------------QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVAC 499

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           ALVDMY KCG L  A+++FD++P +++I W V+I  YGMHG G+E +   + M   G   
Sbjct: 500 ALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAG--- 556

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             ++P E +F ++  AC+HSG++ EG  LF  MK +  IEP  +HYAC+VDLL R+G + 
Sbjct: 557 --IEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLS 614

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
            AY+ I  MP + D A  W +LL  CRIH +VE+ E  A+++F LEP+   +YVLL+N+Y
Sbjct: 615 RAYKFIETMPIKPD-AAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVY 673

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A+ W++   +++++ + G++ + GCSWIE   + + F AGD SH Q++ +   L  L+
Sbjct: 674 AEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLT 733

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            +M + GY       L N ++  KE LLC HSEKLA+
Sbjct: 734 MKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 285/583 (48%), Gaps = 45/583 (7%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+   +RE++  + +M    I+ D++ F  VLK  A    +   K++H +V+
Sbjct: 126 WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVL 185

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S   V N+L+  Y KCG ++     +FD ++++D VSWNSMI+     G     
Sbjct: 186 KLGFG-SYNAVVNSLIAAYFKCG-EVESARILFDELSDRDVVSWNSMISGCTMNGFSRNG 243

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           LE F  ML   V+  S TLV+V +AC+N+     L LGR +H   ++ G        N L
Sbjct: 244 LEFFIQMLNLGVDVDSATLVNVLVACANVGN---LTLGRALHAYGVKAGFSGGVMFNNTL 300

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G ++ A  +F    +  +VSW +I+++  +     EA+    +M  +G++PD 
Sbjct: 301 LDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDI 360

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ SV+ AC+    LD G+E+H +  +N+ +  N  V +AL++MY  C  +E    +F 
Sbjct: 361 YAVTSVVHACACSNSLDKGREVHNHIKKNN-MGSNLPVSNALMNMYAKCGSMEEANLIFS 419

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +  K I  WN MI GY QN    EAL LF+ M++   L P+  TM+ V+PAC    A  
Sbjct: 420 QLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK--QLKPDDVTMACVLPACAGLAALE 477

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHGH ++ G   D +V  AL+DMY + G + +++ +FD +  +D + W  MI GY 
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G   +A+    +M+                 V   +P   +  ++L  C     L +G
Sbjct: 538 MHGFGKEAISTFEKMR-----------------VAGIEPEESSFTSILYACTHSGLLKEG 580

Query: 524 -KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYG 581
            K   +      +   +   + +VD+  + G L+ A +  + MP++ +   W  ++    
Sbjct: 581 WKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCR 640

Query: 582 MHGE-------GQEVLE----------LLKNMVAEGSRGGEVK 607
           +H +        + + E          LL N+ AE  +  EVK
Sbjct: 641 IHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVK 683



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 150/457 (32%), Positives = 235/457 (51%), Gaps = 26/457 (5%)

Query: 44  SWIESLRSEARSNQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW  S+ S    N F R  +  +I+M    +  D+     VL A A + +L+LG+ +HA+
Sbjct: 226 SW-NSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAY 284

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            VK G+    V   NTL++MY KCG ++    +VF ++ E   VSW S+IA   R G   
Sbjct: 285 GVKAGFS-GGVMFNNTLLDMYSKCG-NLNGANEVFVKMGETTIVSWTSIIAAHVREGLHY 342

Query: 163 LALEAFRMMLYSNVEPSSFTLVSV--ALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTF 218
            A+  F  M    + P  + + SV  A ACSN      L  GR+VH N ++      N  
Sbjct: 343 EAIGLFDEMQSKGLRPDIYAVTSVVHACACSN-----SLDKGREVH-NHIKKNNMGSNLP 396

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NALM MYAK G +++A  +F     +++VSWNT++   SQN    EA+     M  + 
Sbjct: 397 VSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQ 455

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +KPD V++A VLPAC+ L  L+ G+EIH + LR     D   V  ALVDMY  C  +   
Sbjct: 456 LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSD-LHVACALVDMYVKCGLLVLA 514

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +++FD I  K + LW  MI GYG + + +EA+  F KM  VAG+ P  ++ +S++ AC  
Sbjct: 515 QQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKM-RVAGIEPEESSFTSILYACTH 573

Query: 399 SEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
           S     KEG     ++K     +  +++   ++D+  R G +  +    + M ++ D   
Sbjct: 574 SGLL--KEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAI 631

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           W  +++G   C  H D  +  +  +++ E +  N  Y
Sbjct: 632 WGALLSG---CRIHHDVELAEKVAEHIFELEPENTRY 665


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/666 (39%), Positives = 365/666 (54%), Gaps = 67/666 (10%)

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           FLR ++     PD   + S L +C    +    + +HA A+ +  L ++ FV S+L+  Y
Sbjct: 10  FLRHVSF---PPDPHLLPSALKSCPAQPL---ARALHAAAVVSG-LAEDPFVASSLLHSY 62

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                    R VFD + +K +  W+A+I GY      E A  L  +M   AG+ PN  T 
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRS-AGVEPNVITW 121

Query: 390 SSVVPACVRSEA----------------FPDKEGI-------------------HGHAIK 414
           + +V    RS                  FPD  G+                   HG+ +K
Sbjct: 122 NGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVK 181

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            G   D  V  AL+DMY + GR +    +F +    D  S N ++ G +   Q  +AL+L
Sbjct: 182 AGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLL 241

Query: 475 LREMQNMEEEKNR-----------NNVYDLDETVL-------RPKPNSITLMTVLPGCGA 516
            RE      E N             N  DL+   L         +PNS+T+  VLP    
Sbjct: 242 FREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFAN 301

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           ++AL  G+  H +++R     DV VGSALVDMYAKCG    AR +FD MP RNV++WN +
Sbjct: 302 VAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAM 361

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y MHG+    ++L  +M     +  + KP+ VTF  +  ACS +G+  EG   F +M
Sbjct: 362 IGGYAMHGDAANAVQLFCSM-----QKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEM 416

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           +  +GI P  +HYAC+V LLGR+GK+++AY LIN MP E D    W SLLG+CR++ NV 
Sbjct: 417 QQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSC-IWGSLLGSCRVYGNVL 475

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + E+AA+ LF LEP  A +YVLLSNIY+S ++WD    VR +MK MG++KE GCSWIE  
Sbjct: 476 LAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIK 535

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           +++H  LAGD SH     +   L  L+  M + G+ P    VLH+V E+EK+ +L  HSE
Sbjct: 536 NKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSE 595

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+A G+++T PGT +RV KNLR+C DCH+A KFIS  E REI +RD  RFHHFK+G C
Sbjct: 596 KLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKC 655

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 656 SCGDYW 661



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 210/475 (44%), Gaps = 92/475 (19%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           PD    P+ LK+        L + +HA  V  G       VA++L++ Y + G+      
Sbjct: 18  PDPHLLPSALKSCPA---QPLARALHAAAVVSGLAEDPF-VASSLLHSYIRLGA-TGAAR 72

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT---LVS------ 185
            VFDR+ EK+ V W+++IA     G  + A      M  + VEP+  T   LVS      
Sbjct: 73  SVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSG 132

Query: 186 -----------------------VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
                                  V+ A S +     + +G+QVHG  ++ G   +  ++ 
Sbjct: 133 RALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVT 192

Query: 222 ALMAMYAKLGRVDD-------------------------------AKTLFKSFEDR---- 246
           AL+ MY K GR D+                               A  LF+ F  R    
Sbjct: 193 ALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVEL 252

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           ++VSW +IV+   QN + LEAV   R M   G++P+ V+I  VLPA +++  L  G+  H
Sbjct: 253 NVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAH 312

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            ++LR   L D  +VGSALVDMY  C +    R +FD +  + +  WNAMI GY  +   
Sbjct: 313 CFSLRKGFLHD-VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDA 371

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGR 419
             A+ LF  M++     P+  T + V+ AC  S+A   +EG         GH I   +  
Sbjct: 372 ANAVQLFCSMQKCKQK-PDLVTFTCVLGAC--SQAGLTEEGRRYFNEMQQGHGISPRM-- 426

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALM 473
           + Y    ++ +  R G+++ +  + ++M    D+  W +++     C  +G+ L+
Sbjct: 427 EHYA--CMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGS---CRVYGNVLL 476



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 43/287 (14%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           RS +  +A+ + + M      PD       L AV  ++++S+GKQ+H +VVK G  L + 
Sbjct: 130 RSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDAC 189

Query: 114 TVANTLVNMYGKCG-SDMWDVYKVFD---------------------------------- 138
            V   L++MYGKCG +D  ++ +VF                                   
Sbjct: 190 VV-TALIDMYGKCGRAD--EIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFI 246

Query: 139 -RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            R  E + VSW S++A   + G+   A++ FR M    VEP+S T+  V  A +N++   
Sbjct: 247 CRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA--- 303

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L  GR  H  SLR G   + ++ +AL+ MYAK G+   A+T+F +   R++VSWN ++ 
Sbjct: 304 ALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIG 363

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             + +     AV     M     KPD V+   VL ACS   + + G+
Sbjct: 364 GYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGR 410



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ +  EA+  +  M    ++P++   P VL A A +  L  G+  H   
Sbjct: 256 SWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFS 315

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+ L  V V + LV+MY KCG        +FD +  ++ VSWN+MI      G    
Sbjct: 316 LRKGF-LHDVYVGSALVDMYAKCGKAR-HARTIFDAMPSRNVVSWNAMIGGYAMHGDAAN 373

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLS-RRDGLRLG---RQVHGNSLRVGEWNTFI 219
           A++ F  M     +P   T   V  ACS      +G R     +Q HG S R+  +   +
Sbjct: 374 AVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMV 433

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
                 +  + G++D+A  L      + D   W +++ S
Sbjct: 434 -----TLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGS 467


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 296/868 (34%), Positives = 481/868 (55%), Gaps = 59/868 (6%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSD----IQPDNFAFPAVLKAVAGIQ 91
            G+  R   +W   +   A+          + +M R D    ++P    F +++ A +   
Sbjct: 229  GTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSS 288

Query: 92   DLS-LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SDMWDVYKVFDRITEKDQVSWN 149
              S +  Q+   V+K G   S + V + LV+ + + G +D  +   +F  + +K+ V+ N
Sbjct: 289  GSSAVLDQVLVWVLKSGCS-SDLYVGSALVSAFARHGLTD--EAKDIFLSLKQKNAVTLN 345

Query: 150  SMIATLCRFGKWDLALEAFRMMLYS----NVEPSSFTLVSVALACSNLSRRDGLRLGRQV 205
             +I  L R    D + EA ++ + +    +V   ++ ++  ALA  ++S  +GLR+GR V
Sbjct: 346  GLIVGLVR---QDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISE-EGLRIGRVV 401

Query: 206  HGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
            HG+ LR G  +    + N L+ MYAK G ++ A  +F+  E  D +SWNTI+S+L QN  
Sbjct: 402  HGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGN 461

Query: 264  FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
              EAVM    M    I P   ++ S L +C+ L++L  G+++H  A++  + +D S V +
Sbjct: 462  CEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS-VSN 520

Query: 324  ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD-EEALMLFIKMEEVAGL 382
             LV MY  C  +    +VF+ +++     WN M+     ++    E + +F  M    GL
Sbjct: 521  VLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMR-GGL 579

Query: 383  WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
             PN  T  +++ A          + +H   +K G+  D  V NAL+  Y++ G +   + 
Sbjct: 580  IPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEH 639

Query: 443  IFDDM-EVRDTVSWNTMITGYTICGQHGDAL----MLLREMQNMEEEKNRNNVYDLDETV 497
            +F +M + RD +SWN+MI+GY   G   +A+    +++   Q M+               
Sbjct: 640  LFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMD--------------- 684

Query: 498  LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
                    T   +L  C +++AL +G E+HA+ IR+ L +DVVV SALVDMY+KCG +++
Sbjct: 685  ------CCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDY 738

Query: 558  ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
            A ++F+ M  RN  +WN +I  Y  HG G++ +E+ + M+    R  E  P+ VTF+++ 
Sbjct: 739  ASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEML----RSRE-SPDHVTFVSVL 793

Query: 618  AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            +ACSH+G+V  G++ +++M  D+GI P  +HY+CV+DLLGRAGK++   + I  MP E  
Sbjct: 794  SACSHAGLVERGLE-YFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIE-P 851

Query: 678  KAGAWSSLLGACRIHQ---NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
             A  W ++L ACR  +   N+++G  A++ L  +EP    +YVL SN +++  +W+    
Sbjct: 852  NALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAK 911

Query: 735  VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
             R  M++   +KE G SW+   D +H F+AGD SH  +++++  L  L + +R  GYVP 
Sbjct: 912  ARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPL 971

Query: 795  TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            T   L+++ EE KE LL  HSEKLAIAF +  +  G  IR+ KNLRVC DCH A ++IS+
Sbjct: 972  TEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSG-PIRIMKNLRVCGDCHIAFRYISQ 1030

Query: 855  IESREIILRDVRRFHHFKNGTCSCGDYW 882
            + SR+IILRD  RFHHFK+G CSCGDYW
Sbjct: 1031 MISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 260/550 (47%), Gaps = 61/550 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           + +H  ++K G     + + N LVN Y K G+ +    +VFD + E++ VSW  +++   
Sbjct: 81  ENLHVELIKRGLN-HDLFLCNHLVNSYAK-GARLAAASQVFDEMPERNAVSWTCLVSGYV 138

Query: 157 RFGKWDLALEAFRMML---YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
             G  + A   FR ML    +   P+SFT  ++  AC +    D L    QVHG   +  
Sbjct: 139 LHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQD-GGPDRLGFAVQVHGLVSKT- 196

Query: 214 EW--NTFIMNALMAMYAK--LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           E+  NT + NAL++MY    +G    A+ +F     RDL++WN ++S  ++         
Sbjct: 197 EYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFT 256

Query: 270 FLRQMALRG-----IKPD----GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
             + M  RG     ++P     G  I +   +     +LD   ++  + L++    D  +
Sbjct: 257 LFKDMQ-RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLD---QVLVWVLKSGCSSD-LY 311

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VGSALV  +      +  + +F  +  K     N +I G  + ++ EEA+ +F+      
Sbjct: 312 VGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTV 371

Query: 381 GLWPNATT----MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMG 435
            +  NA T    +S++    +  E       +HGH ++ GL   +  V N L++MY++ G
Sbjct: 372 DV--NADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCG 429

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            IE +  IF  ME  D +SWNT+I+     G   +A+M    M+               +
Sbjct: 430 AIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMR---------------Q 474

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           + +   P++  L++ L  C  L  L  G+++H  A++  L  D  V + LV MY +CG +
Sbjct: 475 SCI--SPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAM 532

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ----EVLELLKNMVAEGSRGGEVKPNEV 611
           +   +VF+ M   + ++WN ++   G+    Q    E++++  NM+    RGG + PN+V
Sbjct: 533 SDYWKVFNSMAEHDEVSWNTMM---GVMASSQTPISEIVKVFNNMM----RGGLI-PNKV 584

Query: 612 TFIALFAACS 621
           TFI L AA S
Sbjct: 585 TFINLLAALS 594



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 213/487 (43%), Gaps = 45/487 (9%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ N L+  YAK  R+  A  +F    +R+ VSW  +VS    +    EA    R M LR
Sbjct: 97  FLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAM-LR 155

Query: 278 ----GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI------DNSFVGSALVD 327
               G +P   +  ++L AC      D G +   +A++   L+       N+ V +AL+ 
Sbjct: 156 EVQAGCRPTSFTFGTLLRACQ-----DGGPDRLGFAVQVHGLVSKTEYASNTTVCNALIS 210

Query: 328 MY--CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG---L 382
           MY  C        +RVFD    + +  WNA+++ Y +         LF  M+       L
Sbjct: 211 MYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270

Query: 383 WPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            P   T  S++ A   S       + +    +K G   D YV +AL+  ++R G  + +K
Sbjct: 271 RPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAK 330

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF  ++ ++ V+ N +I G            L+R  Q+  EE  +  V   +   +   
Sbjct: 331 DIFLSLKQKNAVTLNGLIVG------------LVR--QDFSEEAVKIFVGTRNTVDVNAD 376

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGCLNFARR 560
              + L  +     +   L  G+ +H + +R  L    + V + LV+MYAKCG +  A +
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK 436

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +F LM   + I+WN II A   +G  +E +     M     R   + P+    I+  ++C
Sbjct: 437 IFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLM-----RQSCISPSNFALISSLSSC 491

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           +   +++ G  +       +G++        +V + G  G + D +++ N M  E D+  
Sbjct: 492 AGLKLLTAGQQVHCDAV-KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM-AEHDEV- 548

Query: 681 AWSSLLG 687
           +W++++G
Sbjct: 549 SWNTMMG 555



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 19/232 (8%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           + ++P   R       E +H   IK GL  D ++ N L++ Y++  R+  +  +FD+M  
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ VSW  +++GY + G   +A  + R M              L E     +P S T  T
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAM--------------LREVQAGCRPTSFTFGT 170

Query: 510 VLPGC--GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC--GCLNFARRVFDLM 565
           +L  C  G    L    ++H    +   A++  V +AL+ MY  C  G    A+RVFD  
Sbjct: 171 LLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT 230

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           P+R++ITWN ++  Y   G+      L K+M    SR  +++P E TF +L 
Sbjct: 231 PIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSR-IQLRPTEHTFGSLI 281


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/766 (36%), Positives = 391/766 (51%), Gaps = 114/766 (14%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NTL++  G   S + DV  +FD +  KD VS+N MI++    G   LA   F      ++
Sbjct: 173 NTLLHALG-VSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF------DL 225

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
            P     VS     +   R   ++  R++  +     EW+    NALMA Y +  ++++A
Sbjct: 226 APEK-DAVSWNGMLAAYVRNGRIQEARELFDSRT---EWDAISWNALMAGYVQRSQIEEA 281

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +F     RD+VSWNT+VS  ++                RG   +   +  V P     
Sbjct: 282 QKMFNKMPQRDVVSWNTMVSGYAR----------------RGDMAEARRLFDVAP----- 320

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
                              I + F  +A+V  Y     +E  +RVFD + DK    WNAM
Sbjct: 321 -------------------IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAM 361

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           +  Y Q    EEA  LF                          +A P             
Sbjct: 362 MAAYVQRRMMEEAKELF--------------------------DAMP------------- 382

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
             R+    N ++  Y++ G ++ ++ IF  M  +D VSW  M+  Y+  G   + L L +
Sbjct: 383 -CRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           EM    E  NR+                     VL  C  ++AL  G ++H+  I+    
Sbjct: 442 EMGRCGEWVNRS-----------------AFACVLSTCADIAALECGMQLHSRLIKAGYG 484

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
               VG+AL+ MY KCG +  A   F+ M  R+V++WN +I  Y  HG G+E LE+   M
Sbjct: 485 VGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTM 544

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                R    KP+++T + + AACSHSG+V +G+  FY M  D+G+   P+HY C++DLL
Sbjct: 545 -----RKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLL 599

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG++++A  L+  MP E D    W +LLGA RIH+N E+G  AA+ +F LEP+ A  Y
Sbjct: 600 GRAGRLDEAVNLMKDMPFEPDST-MWGALLGASRIHRNSELGRNAAEKIFELEPENAGMY 658

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLLSNIY+S+  W     +R  M E GV+K PG SWIE  +++H F  GD  H + E ++
Sbjct: 659 VLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIY 718

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            FLE+L  RM+K GYV  T  VLH+V EEEKE +L  HSEKLA+A+GIL  PPG  IRV 
Sbjct: 719 AFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVI 778

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH A K IS IE R IILRD  RFHHF++G+CSCGDYW
Sbjct: 779 KNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 185/440 (42%), Gaps = 83/440 (18%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N  +  + + GRV DA+ LF +   R   ++NT+++  + N +  +A+ F R +     +
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----R 166

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  S  ++L A      L   +     AL +++ + +S   + ++  + N   V   R 
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVR-----ALFDEMPVKDSVSYNVMISSHANHGLVSLARH 221

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            FD   +K    WN M+  Y +N   +EA  LF    E    W                 
Sbjct: 222 YFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTE----W----------------- 260

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                              D    NALM  Y +  +IE ++ +F+ M  RD VSWNTM++
Sbjct: 261 -------------------DAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVS 301

Query: 461 GYTICGQHGDALML-----LREM-----------QN-MEEEKNRNNVYDLDETVLRPKPN 503
           GY   G   +A  L     +R++           QN M EE  R  V+D       P  N
Sbjct: 302 GYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKR--VFD-----AMPDKN 354

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           +++   ++        + + KE+       M   +V   + ++  YA+ G L+ AR +F 
Sbjct: 355 AVSWNAMMAAYVQRRMMEEAKEL----FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFG 410

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
           +MP ++ ++W  ++ AY   G  +E L+L K M     R GE   N   F  + + C+  
Sbjct: 411 MMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM----GRCGEWV-NRSAFACVLSTCADI 465

Query: 624 GMVSEGMDLFYKM-KDDYGI 642
             +  GM L  ++ K  YG+
Sbjct: 466 AALECGMQLHSRLIKAGYGV 485



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + ++     E +  + EM R     +  AF  VL   A I  L  G Q+H+ +
Sbjct: 419 SWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRL 478

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GYG+    V N L+ MY KCGS M + +  F+ + E+D VSWN+MIA   R G    
Sbjct: 479 IKAGYGVGCF-VGNALLAMYFKCGS-MEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKE 536

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ALE F  M  ++ +P   TLV V  ACS+
Sbjct: 537 ALEVFDTMRKTSTKPDDITLVGVLAACSH 565



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 69/337 (20%)

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           +N  +  + R GR+  ++ +F  M  R T ++NTM+ GY   G+   AL   R +     
Sbjct: 110 RNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----- 164

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                           P+P+S +  T+L   G  S+LA  + +       M   D V  +
Sbjct: 165 ----------------PRPDSFSYNTLLHALGVSSSLADVRAL----FDEMPVKDSVSYN 204

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
            ++  +A  G ++ AR  FDL P ++ ++WN ++ AY  +G  QE  EL  +        
Sbjct: 205 VMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS-------- 256

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD------------------------ 639
              + + +++ AL A       + E   +F KM                           
Sbjct: 257 -RTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRL 315

Query: 640 YGIEPSPD--HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           + + P  D   +  +V    + G +E+A ++ + MP +   A +W++++ A    + +E 
Sbjct: 316 FDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK--NAVSWNAMMAAYVQRRMME- 372

Query: 698 GEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKA 732
               A+ LF   P  +VAS   +L+  Y+ A + D+A
Sbjct: 373 ---EAKELFDAMPCRNVASWNTMLTG-YAQAGMLDEA 405


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/730 (36%), Positives = 384/730 (52%), Gaps = 87/730 (11%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +L+A YA  GR+  A + F +     RD V  N ++S+ ++      AV   R +   G
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 279 -IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS----FVGSALVDMYCNCR 333
            ++PD  S  ++L A  HL  +      H   L+  +L   +     V +ALV +Y  C 
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVR---HCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208

Query: 334 EVEC---GRRVFDFISDKKI-------------------------------ALWNAMITG 359
            +E     R+V D + DK                                  +WNAMI+G
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268

Query: 360 YGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           Y  +    EA  LF +M  E V     +  T +SV+ AC  +  F   + +HG   +L  
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVP---LDEFTFTSVLSACANAGFFAHGKSVHGQITRLQP 325

Query: 418 G----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
                    V NAL+ +YS+ G I +++ IFD+M+ +D VSWNT+++GY        A+ 
Sbjct: 326 NFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVE 385

Query: 474 LLREMQNMEEEK---------------------NRNNVYDLDETVLRPKPNSITLMTVLP 512
           +  EM    E                       NR    D+       KP   T    + 
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDV-------KPCDYTYAGAIS 438

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            CG L +L  GK++H + ++         G+AL+ MYA+CG +  A  +F +MP  + ++
Sbjct: 439 ACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS 498

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I A G HG G+E LEL   MVAEG     + P+ ++F+ +  AC+HSG+V EG   
Sbjct: 499 WNAMISALGQHGHGREALELFDRMVAEG-----IYPDRISFLTVLTACNHSGLVDEGFQY 553

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  MK D+GI P  DHY  ++DLLGRAG++ +A  LI  MP E      W ++L  CR  
Sbjct: 554 FESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFE-PTPSIWEAILSGCRTS 612

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            ++E+G  AA  LF + P     Y+LLSN YS+A  W  A  VRK M++ GV+KEPGCSW
Sbjct: 613 GDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 672

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IE G+++H F+ GD  H ++ +++ FLE +  RMRK GYVPDT  VLH++   +KE +L 
Sbjct: 673 IEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILF 732

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSE+LA+ FG+L  PPG T+ V KNLR+C+DCH    F+SK   REI++RDVRRFHHFK
Sbjct: 733 AHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFK 792

Query: 873 NGTCSCGDYW 882
           +G CSCG+YW
Sbjct: 793 DGECSCGNYW 802



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 220/495 (44%), Gaps = 89/495 (17%)

Query: 53  ARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGK--QIHAHVVKYGYG 109
           AR++    A+  +  +  S  ++PD+++F A+L A   + ++S+    Q+   V+K G G
Sbjct: 132 ARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAG 191

Query: 110 LSSVTVANTLVNMYGKCGS--DMWDVYKVFDRITEKDQVSWNSMIATLCRFG-------- 159
              ++V+N LV +Y KC +     D  KV D + +KD ++W +M+    R G        
Sbjct: 192 -GVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSV 250

Query: 160 ------KWDL-----------------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
                 K+D+                 A E FR M+   V    FT  SV  AC+N    
Sbjct: 251 FEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGF- 309

Query: 197 DGLRLGRQVHGNSLR-----VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                G+ VHG   R     V E    + NAL+ +Y+K G +  A+ +F + + +D+VSW
Sbjct: 310 --FAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSW 367

Query: 252 NTIVSSLSQN---DKFLE----------------------------AVMFLRQMALRGIK 280
           NTI+S   ++   DK +E                            A+    +M    +K
Sbjct: 368 NTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVK 427

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P   + A  + AC  L  L  GK++H + ++      NS  G+AL+ MY  C  V+    
Sbjct: 428 PCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNS-AGNALITMYARCGAVKEANL 486

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS- 399
           +F  + +     WNAMI+  GQ+ +  EAL LF +M    G++P+  +  +V+ AC  S 
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM-VAEGIYPDRISFLTVLTACNHSG 545

Query: 400 ---EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
              E F   E +      +  G D Y +  L+D+  R GRI  ++ +   M    T S W
Sbjct: 546 LVDEGFQYFESMK-RDFGIIPGEDHYTR--LIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602

Query: 456 NTMITGYTICGQHGD 470
             +++G   C   GD
Sbjct: 603 EAILSG---CRTSGD 614



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/557 (23%), Positives = 218/557 (39%), Gaps = 108/557 (19%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITE--KDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           A +LV  Y   G  +      FD + +  +D V  N++I+   R      A+  FR +L 
Sbjct: 91  ATSLVAAYAAAGR-LPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 174 S-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKL- 230
           S ++ P  ++  ++  A  +L     +R   Q+  + L+ G      + NAL+A+Y K  
Sbjct: 150 SGSLRPDDYSFTALLSAAGHLPNIS-VRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208

Query: 231 ---------------------------------GRVDDAKTLFKSFEDRDLVSWNTIVSS 257
                                            G V  A+++F+  + +  V WN ++S 
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR---NDI 314
              +   +EA    R+M L  +  D  +  SVL AC++      GK +H    R   N +
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV 328

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA------------------- 355
                 V +ALV +Y  C  +   RR+FD +  K +  WN                    
Sbjct: 329 PEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFE 388

Query: 356 ------------MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
                       M++GY    + E+AL LF +M     + P   T +  + AC    +  
Sbjct: 389 EMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMR-AEDVKPCDYTYAGAISACGELGSLK 447

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + +HGH ++LG        NAL+ MY+R G ++ +  +F  M   D+VSWN MI+   
Sbjct: 448 HGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISAL- 506

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             GQHG      RE   + +      +Y          P+ I+ +TVL  C     + +G
Sbjct: 507 --GQHGHG----REALELFDRMVAEGIY----------PDRISFLTVLTACNHSGLVDEG 550

Query: 524 KEIHAYAIRNMLATDVVVG----SALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVII- 577
            +      R+     ++ G    + L+D+  + G +  AR +   MP     + W  I+ 
Sbjct: 551 FQYFESMKRDF---GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607

Query: 578 -------MAYGMHGEGQ 587
                  M  G H   Q
Sbjct: 608 GCRTSGDMELGAHAADQ 624



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 40/351 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +     S    EA   +  M    +  D F F +VL A A     + GK +H  + 
Sbjct: 262 WNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQIT 321

Query: 105 KYGYGL---SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           +        +++ V N LV +Y KCG ++    ++FD +  KD VSWN++++        
Sbjct: 322 RLQPNFVPEAALPVNNALVTLYSKCG-NIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380

Query: 162 DLALEAFRMMLYSN-------------------------------VEPSSFTLVSVALAC 190
           D A+E F  M Y N                               V+P  +T      AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
             L     L+ G+Q+HG+ +++G E +    NAL+ MYA+ G V +A  +F    + D V
Sbjct: 441 GELG---SLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSV 497

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWN ++S+L Q+    EA+    +M   GI PD +S  +VL AC+H  ++D G +     
Sbjct: 498 SWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESM 557

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG 359
            R+  +I      + L+D+      +   R +   +  +   ++W A+++G
Sbjct: 558 KRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 10/217 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +          +A+  +  M   D++P ++ +   + A   +  L  GKQ+H H+
Sbjct: 397 SWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHL 456

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+  S+ +  N L+ MY +CG+ + +   +F  +   D VSWN+MI+ L + G    
Sbjct: 457 VQLGFEGSN-SAGNALITMYARCGA-VKEANLMFLVMPNIDSVSWNAMISALGQHGHGRE 514

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGN-SLRVGEWNTFIMN 221
           ALE F  M+   + P   + ++V  AC++    D G +    +  +  +  GE +     
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH---YT 571

Query: 222 ALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVS 256
            L+ +  + GR+ +A+ L K+  FE    + W  I+S
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSI-WEAILS 607


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/700 (36%), Positives = 390/700 (55%), Gaps = 27/700 (3%)

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSF 243
           +VA      +R   L  G+Q+H   +R G   NTF+ N  + +Y+K G +D    LF   
Sbjct: 77  TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             R++VSW +I++  + N +F EA+    QM + G      +++SVL AC+ L  +  G 
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H   ++     +  FVGS L DMY  C E+    + F+ +  K   LW +MI G+ +N
Sbjct: 197 QVHCLVVKCGFGCE-LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKN 255

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              ++AL  ++KM     ++ +   + S + AC   +A    + +H   +KLG   + ++
Sbjct: 256 GDFKKALTAYMKMV-TDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFI 314

Query: 424 QNALMDMYSRMGRIEISKTIFD-DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            NAL DMYS+ G +  +  +F    +    VS   +I GY              EM  +E
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV-------------EMDQIE 361

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
             K  +   DL    +  +PN  T  +++  C   + L  G ++H   ++     D  V 
Sbjct: 362 --KALSTFVDLRRRGI--EPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           S LVDMY KCG  + + ++FD +   + I WN ++  +  HG G+  +E    M+  G  
Sbjct: 418 STLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRG-- 475

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              +KPN VTF+ L   CSH+GMV +G++ F  M+  YG+ P  +HY+CV+DLLGRAGK+
Sbjct: 476 ---LKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKL 532

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A   IN MP E +  G W S LGAC+IH ++E  + AA  L  LEP+ +  +VLLSNI
Sbjct: 533 KEAEDFINNMPFEPNVFG-WCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNI 591

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+  + W+    +RK +K+  + K PG SW++  ++ H F   D SH Q ++++  L+NL
Sbjct: 592 YAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNL 651

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            +++++ GYVP T  VL ++++  KE LL  HSE++A+AF +L  P G  I V KNLRVC
Sbjct: 652 LDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVC 711

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +DCH A KFISK+  R II+RD+ RFHHF NG+CSCGDYW
Sbjct: 712 SDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 246/515 (47%), Gaps = 44/515 (8%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +++  A  ++L+ GKQ+HA +++ G  L +  ++N  +N+Y KCG   + + K+FD++++
Sbjct: 81  LIQTYARTKELNKGKQLHAMLIRGG-CLPNTFLSNHFLNLYSKCGELDYTI-KLFDKMSQ 138

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           ++ VSW S+I       ++  AL +F  M       + F L SV  AC++L     ++ G
Sbjct: 139 RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG---AIQFG 195

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            QVH   ++ G     F+ + L  MY+K G + DA   F+    +D V W +++    +N
Sbjct: 196 TQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKN 255

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
             F +A+    +M    +  D   + S L ACS L+    GK +HA  L+     + +F+
Sbjct: 256 GDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE-TFI 314

Query: 322 GSALVDMYCNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           G+AL DMY    ++     VF   SD   I    A+I GY + +  E+AL  F+ +    
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR-R 373

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ PN  T +S++ AC           +HG  +K    RD +V + L+DMY + G  + S
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHS 433

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             +FD++E  D ++WNT++  ++   QHG                 RN +   +  + R 
Sbjct: 434 IQLFDEIENPDEIAWNTLVGVFS---QHG---------------LGRNAIETFNGMIHRG 475

Query: 501 -KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--------SALVDMYAK 551
            KPN++T + +L GC     +  G       +    + + + G        S ++D+  +
Sbjct: 476 LKPNAVTFVNLLKGCSHAGMVEDG-------LNYFSSMEKIYGVVPKEEHYSCVIDLLGR 528

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            G L  A    + MP   NV  W   + A  +HG+
Sbjct: 529 AGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGD 563



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 208/437 (47%), Gaps = 26/437 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +++F+EA+ S+ +M         FA  +VL+A   +  +  G Q+H  V
Sbjct: 143 SWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLV 202

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+G   + V + L +MY KCG ++ D  K F+ +  KD V W SMI    + G +  
Sbjct: 203 VKCGFG-CELFVGSNLTDMYSKCG-ELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKK 260

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL A+  M+  +V      L S   ACS L        G+ +H   L++G E+ TFI NA
Sbjct: 261 ALTAYMKMVTDDVFIDQHVLCSTLSACSALKASS---FGKSLHATILKLGFEYETFIGNA 317

Query: 223 LMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           L  MY+K G +  A  +F+   D   +VS   I+    + D+  +A+     +  RGI+P
Sbjct: 318 LTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEP 377

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +  S++ AC++   L+ G ++H   ++ +   D  FV S LVDMY  C   +   ++
Sbjct: 378 NEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRD-PFVSSTLVDMYGKCGLFDHSIQL 436

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-- 399
           FD I +     WN ++  + Q+     A+  F  M    GL PNA T  +++  C  +  
Sbjct: 437 FDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIH-RGLKPNAVTFVNLLKGCSHAGM 495

Query: 400 -----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV- 453
                  F   E I+G   K     + Y  + ++D+  R G+++ ++   ++M     V 
Sbjct: 496 VEDGLNYFSSMEKIYGVVPK----EEHY--SCVIDLLGRAGKLKEAEDFINNMPFEPNVF 549

Query: 454 SWNTMITGYTICGQHGD 470
            W + +     C  HGD
Sbjct: 550 GWCSFLGA---CKIHGD 563



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 208/427 (48%), Gaps = 33/427 (7%)

Query: 270 FLRQMALRGIK-PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           FL+ +   G K  D  ++A ++   +  + L+ GK++HA  +R   L  N+F+ +  +++
Sbjct: 61  FLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCL-PNTFLSNHFLNL 119

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C E++   ++FD +S + +  W ++ITG+  N   +EAL  F +M  + G       
Sbjct: 120 YSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQM-RIEGEIATQFA 178

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +SSV+ AC    A      +H   +K G G + +V + L DMYS+ G +  +   F++M 
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D V W +MI G+   G    AL    +M         ++V+ +D+ V         L 
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT-------DDVF-IDQHV---------LC 281

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-V 567
           + L  C AL A + GK +HA  ++     +  +G+AL DMY+K G +  A  VF +    
Sbjct: 282 STLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDC 341

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            ++++   II  Y    E  ++ + L   V    RG  ++PNE TF +L  AC++   + 
Sbjct: 342 ISIVSLTAIIDGY---VEMDQIEKALSTFVDLRRRG--IEPNEFTFTSLIKACANQAKLE 396

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM--PPEFDKAGAWSSL 685
            G  L  ++   +  +  P   + +VD+ G+ G  + + QL + +  P E     AW++L
Sbjct: 397 HGSQLHGQVV-KFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEI----AWNTL 451

Query: 686 LGACRIH 692
           +G    H
Sbjct: 452 VGVFSQH 458


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/767 (35%), Positives = 418/767 (54%), Gaps = 69/767 (8%)

Query: 135 KVFDRITEKDQVSWNSMI-ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           ++F+ +   +  +WN+++ A L        AL  +++ L S+ +P S+T   +   C+  
Sbjct: 59  RIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCA-- 116

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
             R     GRQ+H +++  G + + ++ N LM +YA  G V  A+ +F+     DLVSWN
Sbjct: 117 -ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWN 175

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T+++   Q  +  EA      M  R                                   
Sbjct: 176 TLLAGYVQAGEVEEAERVFEGMPER----------------------------------- 200

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEAL 370
                N+   ++++ ++     VE  RR+F+ +   ++ +  W+AM++ Y QNE  EEAL
Sbjct: 201 -----NTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEAL 255

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           +LF++M+  +G+  +   + S + AC R         +HG A+K+G+     ++NAL+ +
Sbjct: 256 VLFVEMKG-SGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHL 314

Query: 431 YSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQN--------- 480
           YS  G I  ++ IFDD  E+ D +SWN+MI+GY  CG   DA ML   M           
Sbjct: 315 YSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAM 374

Query: 481 ----MEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
                + E     +    E  L   +P+   L++ +  C  L+ L  GK IHAY  RN L
Sbjct: 375 ISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKL 434

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +V++ + L+DMY KCGC+  A  VF  M  + V TWN +I+   M+G  ++ L    N
Sbjct: 435 QVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSL----N 490

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M A+  + G V PNE+TF+ +  AC H G+V++G   F  M  ++ IE +  HY C+VDL
Sbjct: 491 MFADMKKTGTV-PNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDL 549

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG +++A +LI+ MP   D A  W +LLGACR H++ E+GE   + L  L+PD    
Sbjct: 550 LGRAGLLKEAEELIDSMPMAPDVA-TWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGF 608

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           +VLLSNIY+S   W   +++R  M + GV K PGCS IE    +H+FLAGD +H Q   +
Sbjct: 609 HVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDI 668

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
              L+ ++ +++ EGYVP TS V  +++EEEKET L  HSEKLA+AFG++   P T IRV
Sbjct: 669 EHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRV 728

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLR+CNDCH   K ISK   R+I++RD  RFHHFK+G CSC D+W
Sbjct: 729 TKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 252/572 (44%), Gaps = 106/572 (18%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           N   +A+L Y     S  +PD++ +P +L+  A       G+Q+HAH V  G+    V V
Sbjct: 84  NSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFD-GDVYV 142

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            NTL+N+Y  CGS +    +VF+     D VSWN+++A   + G+ + A   F  M    
Sbjct: 143 RNTLMNLYAVCGS-VGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM---- 197

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
                                                 E NT   N+++A++ + G V+ 
Sbjct: 198 -------------------------------------PERNTIASNSMIALFGRKGCVEK 220

Query: 236 AKTLFKSF--EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           A+ +F      +RD+VSW+ +VS   QN+   EA++   +M   G+  D V + S L AC
Sbjct: 221 ARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSAC 280

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD---------- 343
           S +  ++ G+ +H  A++  +  D   + +AL+ +Y +C E+   RR+FD          
Sbjct: 281 SRVLNVEMGRWVHGLAVKVGVE-DYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLIS 339

Query: 344 --------------------FIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                               F S  +K +  W+AMI+GY Q+E   EAL LF +M ++ G
Sbjct: 340 WNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM-QLHG 398

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + P+ T + S + AC         + IH +  +  L  +  +   L+DMY + G +E + 
Sbjct: 399 VRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENAL 458

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F  ME +   +WN +I G  + G                 E++ N   D+ +T     
Sbjct: 459 EVFYAMEEKGVSTWNAVILGLAMNGS---------------VEQSLNMFADMKKT--GTV 501

Query: 502 PNSITLMTVLPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
           PN IT M VL  C  +  +  G+      IH + I      ++     +VD+  + G L 
Sbjct: 502 PNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIE----ANIKHYGCMVDLLGRAGLLK 557

Query: 557 FARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
            A  + D MP+  +V TW  ++ A   H + +
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDNE 589



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 49/312 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    EA++ ++EM  S +  D     + L A + + ++ +G+ +H   
Sbjct: 237 SWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLA 296

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD------------------------- 138
           VK G     V++ N L+++Y  CG ++ D  ++FD                         
Sbjct: 297 VKVGVE-DYVSLKNALIHLYSSCG-EIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQ 354

Query: 139 -------RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
                   + EKD VSW++MI+   +   +  AL  F+ M    V P    LVS   AC+
Sbjct: 355 DAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACT 414

Query: 192 NLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           +L+  D   LG+ +H     N L+V   N  +   L+ MY K G V++A  +F + E++ 
Sbjct: 415 HLATLD---LGKWIHAYISRNKLQV---NVILSTTLIDMYMKCGCVENALEVFYAMEEKG 468

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE--- 304
           + +WN ++  L+ N    +++     M   G  P+ ++   VL AC H+ +++ G+    
Sbjct: 469 VSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFN 528

Query: 305 --IHAYALRNDI 314
             IH + +  +I
Sbjct: 529 SMIHEHKIEANI 540



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 22/213 (10%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI---EISKTI 443
           +T+ S++ +C     F     +    I  GL  D Y  + L++  S    +     S  I
Sbjct: 4   STLDSLLQSCKCPRHFKQ---LLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+ +   +T +WNT++  +               +QN   +   +    L       KP+
Sbjct: 61  FNHLRNPNTFTWNTIMRAHLY-------------LQNSPHQALLHYKLFLAS---HAKPD 104

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           S T   +L  C A  +  +G+++HA+A+ +    DV V + L+++YA CG +  ARRVF+
Sbjct: 105 SYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFE 164

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
             PV ++++WN ++  Y   GE +E   + + M
Sbjct: 165 ESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM 197



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 8/221 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+   F EA+  + EM    ++PD  A  + + A   +  L LGK IHA++
Sbjct: 370 SWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYI 429

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +    + +V ++ TL++MY KCG  + +  +VF  + EK   +WN++I  L   G  + 
Sbjct: 430 SRNKLQV-NVILSTTLIDMYMKCGC-VENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQ 487

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR--LGRQVHGNSLRVGEWNTFIMN 221
           +L  F  M  +   P+  T + V  AC ++   +  R      +H + +   E N     
Sbjct: 488 SLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKI---EANIKHYG 544

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQN 261
            ++ +  + G + +A+ L  S     D+ +W  ++ +  ++
Sbjct: 545 CMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH 585


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 292/821 (35%), Positives = 450/821 (54%), Gaps = 41/821 (4%)

Query: 73   IQPDNFAFPAVLKAVAGIQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SD 129
             +P+ + F +++ A     D  L   +Q+ A V K G+ L  + V + LV+ + + G +D
Sbjct: 749  FKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGF-LQDLYVGSALVSGFARFGLTD 807

Query: 130  MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
              D   +F+++  ++ VS N ++  L +  + + A + F  M    V  +S + V +  A
Sbjct: 808  --DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSA 864

Query: 190  CSNLS-RRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
             S  S   +G R GR+VH + +R G  +    I N L+ MYAK G + DA ++F+   ++
Sbjct: 865  FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 924

Query: 247  DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
            D VSWN+++S L QN+   +A     +M   G  P   ++ S L +C+ L  +  G++IH
Sbjct: 925  DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 984

Query: 307  AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
               L+  +  D S V +AL+ +Y          +VF  + +     WN++I     +E  
Sbjct: 985  CDGLKLGLDTDVS-VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 1043

Query: 367  -EEALMLFIKMEEVAGLWP-NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
              +A+  F++M  + G W  +  T  +++ A            IH   +K  L  D  + 
Sbjct: 1044 VSQAVKYFLEM--MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 1101

Query: 425  NALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NAL+  Y + G +   + IF  M E RD VSWN+MI+GY     H + L    ++     
Sbjct: 1102 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI----HNELLHKAMDLVWFMM 1157

Query: 484  EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
            +K +             + +S T  TVL  C +++ L +G E+HA  IR  + +DVVVGS
Sbjct: 1158 QKGQ-------------RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGS 1204

Query: 544  ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
            ALVDMY+KCG +++A R F+LMP+RNV +WN +I  Y  HG G++ L+L   M+ +G   
Sbjct: 1205 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 1264

Query: 604  GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
              V P     + + +ACSH G V EG + F  M + Y + P  +H++C+VDLLGRAGK++
Sbjct: 1265 DHVAP----LLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 1320

Query: 664  DAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
            +    IN MP +      W ++LGAC R + +N E+G  AA+ L  LEP  A +YVLL+N
Sbjct: 1321 EVGDFINSMPMK-PNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 1379

Query: 722  IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
            +Y+S + W+     R  MKE  V+KE GCSW+   D +H F+AGD  H + + ++  L  
Sbjct: 1380 MYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRE 1439

Query: 782  LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
            L+ +MR  GY+P T   L ++  E KE LL  HSEK+A+AF +L       IR+ KNLRV
Sbjct: 1440 LNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRV 1498

Query: 842  CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            C DCH A  +ISKI  R+I+LRD  RFHHF++G CSCGDYW
Sbjct: 1499 CGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 310/651 (47%), Gaps = 44/651 (6%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
            EA   + +M R+   P+++AF + L+A   +G     LG QIH  + K  YG S V V N
Sbjct: 628  EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG-SDVVVCN 686

Query: 118  TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM----LY 173
             L++MYG C     D   VFDRI  ++ +SWNS+I+   R G    A + F  M    L 
Sbjct: 687  VLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLG 746

Query: 174  SNVEPSSFTLVS-VALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLG 231
             + +P+ +T  S +  ACS++    GL +  Q+     + G   + ++ +AL++ +A+ G
Sbjct: 747  FSFKPNEYTFGSLITAACSSVDF--GLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFG 804

Query: 232  RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGVSIASVL 290
              DDAK +F+    R++VS N ++  L +  +   A     +M  L GI  D  S   +L
Sbjct: 805  LTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLL 862

Query: 291  PACSHLEMLD----TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
             A S   +L+     G+E+HA+ +R  +  +   +G+ LV+MY     +     VF+ + 
Sbjct: 863  SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 922

Query: 347  DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            +K    WN++I+G  QNE  E+A   F++M     + P+  T+ S + +C         E
Sbjct: 923  EKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM-PSNFTLISTLSSCASLGWIMLGE 981

Query: 407  GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
             IH   +KLGL  D  V NAL+ +Y+  G       +F  M   D VSWN++I       
Sbjct: 982  QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA----- 1036

Query: 467  QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
                       + + E   ++   Y L+        + +T + +L    +LS      +I
Sbjct: 1037 -----------LSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 1085

Query: 527  HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGE 585
            HA  ++  L+ D  +G+AL+  Y KCG +N   ++F  M   R+ ++WN +I  Y  +  
Sbjct: 1086 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 1145

Query: 586  GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
              + ++L+  M+ +G R      +  TF  + +AC+    +  GM++ +       +E  
Sbjct: 1146 LHKAMDLVWFMMQKGQR-----LDSFTFATVLSACASVATLERGMEV-HACGIRACMESD 1199

Query: 646  PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
                + +VD+  + G+++ A +   +MP       +W+S++     H + E
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMP--LRNVYSWNSMISGYARHGHGE 1248



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 302/613 (49%), Gaps = 60/613 (9%)

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
             +++H   +KYG+ + ++ ++NTL+N+Y + G D+    K+FD ++ ++ V+W  +I+  
Sbjct: 563  ARELHLQSIKYGF-VGNLFLSNTLINIYVRIG-DLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVG 213
             + GK D A   FR M+ +   P+ +   S   AC   S   G +LG Q+HG  +  R G
Sbjct: 621  TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGCKLGVQIHGLISKTRYG 679

Query: 214  EWNTFIMNALMAMYAK-LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
              +  + N L++MY   L   +DA+++F     R+ +SWN+I+S  S+    + A     
Sbjct: 680  S-DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFS 738

Query: 273  QMALRGI----KPDGVSIASVL-PACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALV 326
             M   G+    KP+  +  S++  ACS ++  L   +++ A   ++  L D  +VGSALV
Sbjct: 739  SMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQD-LYVGSALV 797

Query: 327  DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
              +      +  + +F+ +  + +   N ++ G  + +  E A  +F +M+++ G+  ++
Sbjct: 798  SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS 857

Query: 387  --TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTI 443
                +S+     V  E       +H H I+ GL  ++  + N L++MY++ G I  + ++
Sbjct: 858  YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 917

Query: 444  FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK-- 501
            F+ M  +D+VSWN++I+G                 QN   E       D  E+ LR +  
Sbjct: 918  FELMVEKDSVSWNSLISGLD---------------QNECSE-------DAAESFLRMRRT 955

Query: 502  ---PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
               P++ TL++ L  C +L  +  G++IH   ++  L TDV V +AL+ +YA+ GC    
Sbjct: 956  GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 1015

Query: 559  RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             +VF LMP  + ++WN +I   G   + +  +        E  RGG    + VTFI + +
Sbjct: 1016 LKVFSLMPEYDQVSWNSVI---GALSDSEASVSQAVKYFLEMMRGG-WGLSRVTFINILS 1071

Query: 619  ACSHSGM--VS---EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            A S   +  VS     + L Y + DD  I  +      ++   G+ G++ +  ++   M 
Sbjct: 1072 AVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA------LLSCYGKCGEMNECEKIFARMS 1125

Query: 674  PEFDKAGAWSSLL 686
               D+  +W+S++
Sbjct: 1126 ETRDEV-SWNSMI 1137



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 55/508 (10%)

Query: 202  GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
             R++H  S++ G   N F+ N L+ +Y ++G +  A+ LF    +R+LV+W  ++S  +Q
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 261  NDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC--SHLEMLDTGKEIHAYALR----NDI 314
            N K  EA    R M   G  P+  +  S L AC  S       G +IH    +    +D+
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 315  LIDNSFVGSALVDMYCNCRE-VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            ++ N      L+ MY +C +     R VFD I  +    WN++I+ Y +      A  LF
Sbjct: 683  VVCN-----VLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLF 737

Query: 374  IKMEEVA---GLWPNATTMSSVVPACVRSEAFP--DKEGIHGHAIKLGLGRDRYVQNALM 428
              M++        PN  T  S++ A   S  F     E +     K G  +D YV +AL+
Sbjct: 738  SSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALV 797

Query: 429  DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
              ++R G  + +K IF+ M VR+ VS N ++ G     Q   A  +  EM+++       
Sbjct: 798  SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL------- 850

Query: 489  NVYDLDETVLRPKPNSITLMTVLPGCGALSALA----KGKEIHAYAIRNMLATD-VVVGS 543
                          NS + + +L      S L     KG+E+HA+ IR  L  + V +G+
Sbjct: 851  -----------VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGN 899

Query: 544  ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
             LV+MYAK G +  A  VF+LM  ++ ++WN +I     +   ++  E    M   GS  
Sbjct: 900  GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGS-- 957

Query: 604  GEVKPNEVTFIALFAACSHSGMVSEGMDLF---YKMKDDYGIEPSPDHYACVVDLLGRAG 660
                P+  T I+  ++C+  G +  G  +     K+  D  +  S      ++ L    G
Sbjct: 958  ---MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSN----ALLALYAETG 1010

Query: 661  KVEDAYQLINMMPPEFDKAGAWSSLLGA 688
               +  ++ ++M PE+D+  +W+S++GA
Sbjct: 1011 CFTECLKVFSLM-PEYDQV-SWNSVIGA 1036



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 26/246 (10%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L+ ++ T  S++     S    +   +H  +IK G   + ++ N L+++Y R+G +  ++
Sbjct: 540 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 599

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD+M  R+ V+W  +I+GYT  G+  +A    R+M                   +R  
Sbjct: 600 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM-------------------VRAG 640

Query: 502 --PNSITLMTVLPGC--GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLN 556
             PN     + L  C     S    G +IH    +    +DVVV + L+ MY  C    N
Sbjct: 641 FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSAN 700

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            AR VFD + +RN I+WN II  Y   G+     +L  +M  EG  G   KPNE TF +L
Sbjct: 701 DARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEG-LGFSFKPNEYTFGSL 759

Query: 617 F-AACS 621
             AACS
Sbjct: 760 ITAACS 765



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%)

Query: 37   SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
            S+TR + SW   +     +    +A+     M +   + D+F F  VL A A +  L  G
Sbjct: 1125 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG 1184

Query: 97   KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
             ++HA  ++     S V V + LV+MY KCG   +   + F+ +  ++  SWNSMI+   
Sbjct: 1185 MEVHACGIRACME-SDVVVGSALVDMYSKCGRIDY-ASRFFELMPLRNVYSWNSMISGYA 1242

Query: 157  RFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNL 193
            R G  + AL+ F RMML          L+ V  ACS++
Sbjct: 1243 RHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHV 1280



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           + +E+H  +I+     ++ + + L+++Y + G L  A+++FD M  RN++TW  +I  Y 
Sbjct: 562 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 621

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            +G+  E     ++MV    R G + PN   F +   AC  SG
Sbjct: 622 QNGKPDEACARFRDMV----RAGFI-PNHYAFGSALRACQESG 659


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/662 (39%), Positives = 366/662 (55%), Gaps = 72/662 (10%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N ++A Y + GRV++A+ LF S  + D++SWN ++S   Q  K  EA     +M  R + 
Sbjct: 41  NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVV 100

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
              + ++                    YA R D+                    VE  RR
Sbjct: 101 SWNIMVS-------------------GYARRGDM--------------------VE-ARR 120

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +FD    + +  W A+++GY QN   EEA  +F  M E      NA + +++V A ++  
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPE-----RNAVSWNAMVAAYIQRR 175

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
              + + +      +   R+    N ++  Y++ G +E +K +FD M  +D VSW  M+ 
Sbjct: 176 MMDEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLA 231

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y+  G   + L L  EM    E  NR+                     VL  C  ++AL
Sbjct: 232 AYSQGGCSEETLQLFIEMGRCGEWVNRS-----------------AFACVLSTCADIAAL 274

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G ++H   IR        VG+AL+ MY KCG +  AR  F+ M  R+V++WN +I  Y
Sbjct: 275 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 334

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG G+E LE+   M     R    KP+++T + + AACSHSG+V +G+  FY M  D+
Sbjct: 335 ARHGFGKEALEIFDMM-----RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDF 389

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G+   P+HY C++DLLGRAG++ +A+ L+  MP E D    W +LLGA RIH+N E+G  
Sbjct: 390 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST-MWGALLGASRIHRNPELGRS 448

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ +F LEP+ A  YVLLSNIY+S+  W  A  +R  M+E GV+K PG SWIE  +++H
Sbjct: 449 AAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVH 508

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F AGD  H + E+++ FLE+L  RM+K GYV  T  VLH+V EEEKE +L  HSEKLA+
Sbjct: 509 TFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAV 568

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           A+GILN PPG  IRV KNLRVC DCH A K+IS IE R I+LRD  RFHHF+ G+CSCGD
Sbjct: 569 AYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGD 628

Query: 881 YW 882
           YW
Sbjct: 629 YW 630



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 198/450 (44%), Gaps = 41/450 (9%)

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD   EKD VSWN M+A   R G+    +E  R +  S  E   + ++S     S   + 
Sbjct: 29  FDLAPEKDAVSWNGMLAAYVRNGR----VEEARGLFNSRTE---WDVISWNALMSGYVQW 81

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
             +   R++     R+   +    N +++ YA+ G + +A+ LF +   RD+ +W  +VS
Sbjct: 82  GKMSEARELFD---RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 138

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             +QN    EA      M  R    + VS  +++ A     M+D  KE     L N +  
Sbjct: 139 GYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKE-----LFNMMPC 189

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N    + ++  Y     +E  + VFD +  K    W AM+  Y Q    EE L LFI+M
Sbjct: 190 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 249

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               G W N +  + V+  C    A      +HG  I+ G G   +V NAL+ MY + G 
Sbjct: 250 GRC-GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 308

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +E ++  F++ME RD VSWNTMI GY   G   +AL                 ++D+  T
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL----------------EIFDMMRT 352

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGC 554
               KP+ ITL+ VL  C     + KG   + Y++ +           + ++D+  + G 
Sbjct: 353 T-STKPDDITLVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 410

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           L  A  +   MP   +   W  ++ A  +H
Sbjct: 411 LAEAHDLMKDMPFEPDSTMWGALLGASRIH 440



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 47/333 (14%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFD + E++ VSWN+M+A   +    D A E F MM                  C N  
Sbjct: 151 RVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM-----------------PCRN-- 191

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                            V  WNT     ++  YA+ G +++AK +F +   +D VSW  +
Sbjct: 192 -----------------VASWNT-----MLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 229

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +++ SQ     E +    +M   G   +  + A VL  C+ +  L+ G ++H   +R   
Sbjct: 230 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGY 289

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            +   FVG+AL+ MY  C  +E  R  F+ + ++ +  WN MI GY ++ + +EAL +F 
Sbjct: 290 GV-GCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 348

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYS 432
            M   +   P+  T+  V+ AC  S    +K   + +++    G     ++   ++D+  
Sbjct: 349 MMRTTSTK-PDDITLVGVLAACSHS-GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 406

Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
           R GR+  +  +  DM    D+  W  ++    I
Sbjct: 407 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRI 439



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 6/204 (2%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   NT++  Y + G  + +   VFD + +KD VSW +M+A   + G  +  L+ F  M
Sbjct: 191 NVASWNTMLTGYAQAGM-LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 249

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKL 230
                  +      V   C++++    L  G Q+HG  +R G     F+ NAL+AMY K 
Sbjct: 250 GRCGEWVNRSAFACVLSTCADIA---ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 306

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G ++DA+  F+  E+RD+VSWNT+++  +++    EA+     M     KPD +++  VL
Sbjct: 307 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 366

Query: 291 PACSHLEMLDTGKEIHAYALRNDI 314
            ACSH  +++ G   + Y++ +D 
Sbjct: 367 AACSHSGLVEKGIS-YFYSMHHDF 389



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + ++     E +  +IEM R     +  AF  VL   A I  L  G Q+H  +
Sbjct: 225 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRL 284

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GYG+    V N L+ MY KCG +M D    F+ + E+D VSWN+MIA   R G    
Sbjct: 285 IRAGYGVGCF-VGNALLAMYFKCG-NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKE 342

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ALE F MM  ++ +P   TLV V  ACS+
Sbjct: 343 ALEIFDMMRTTSTKPDDITLVGVLAACSH 371



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 140/328 (42%), Gaps = 40/328 (12%)

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           + +S   + ++  + N   V   R  FD   +K    WN M+  Y +N   EEA  LF  
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 62

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
             E   +  NA  MS  V     SEA    + +         GRD    N ++  Y+R G
Sbjct: 63  RTEWDVISWNA-LMSGYVQWGKMSEARELFDRMP--------GRDVVSWNIMVSGYARRG 113

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +  ++ +FD   VRD  +W  +++GY    Q+G           M EE  R  V+D   
Sbjct: 114 DMVEARRLFDAAPVRDVFTWTAVVSGYA---QNG-----------MLEEARR--VFD--- 154

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
               P+ N+++   ++        + + KE+       M   +V   + ++  YA+ G L
Sbjct: 155 --AMPERNAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVASWNTMLTGYAQAGML 208

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A+ VFD MP ++ ++W  ++ AY   G  +E L+L   M     R GE   N   F  
Sbjct: 209 EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM----GRCGEW-VNRSAFAC 263

Query: 616 LFAACSHSGMVSEGMDLFYKM-KDDYGI 642
           + + C+    +  GM L  ++ +  YG+
Sbjct: 264 VLSTCADIAALECGMQLHGRLIRAGYGV 291



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 49/274 (17%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           RD    N ++  ++  G + +++  FD    +D VSWN M+  Y   G+           
Sbjct: 4   RDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGR----------- 52

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
             +EE +   N         R + + I+   ++ G      +++ +E+       M   D
Sbjct: 53  --VEEARGLFNS--------RTEWDVISWNALMSGYVQWGKMSEAREL----FDRMPGRD 98

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           VV  + +V  YA+ G +  ARR+FD  PVR+V TW  ++  Y  +G           M+ 
Sbjct: 99  VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG-----------MLE 147

Query: 599 EGSRGGEVKP--NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           E  R  +  P  N V++ A+ AA     M+ E  +LF  M       P  +  +    L 
Sbjct: 148 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM-------PCRNVASWNTMLT 200

Query: 657 G--RAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G  +AG +E+A  + + MP +   A +W+++L A
Sbjct: 201 GYAQAGMLEEAKAVFDTMPQK--DAVSWAAMLAA 232



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 44/236 (18%)

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
           M   D V  + ++  +A  G ++ AR  FDL P ++ ++WN ++ AY  +G  +E     
Sbjct: 1   MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE----- 55

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM----------------- 636
               A G      + + +++ AL +     G +SE  +LF +M                 
Sbjct: 56  ----ARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 111

Query: 637 -------KDDYGIEPSPD--HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
                  +  +   P  D   +  VV    + G +E+A ++ + MP     A +W++++ 
Sbjct: 112 RGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER--NAVSWNAMVA 169

Query: 688 ACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           A    + ++     A+ LF + P  +VAS   +L+  Y+ A + ++A  V   M +
Sbjct: 170 AYIQRRMMD----EAKELFNMMPCRNVASWNTMLTG-YAQAGMLEEAKAVFDTMPQ 220


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/771 (34%), Positives = 425/771 (55%), Gaps = 34/771 (4%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RM 170
           SV + N  + M+ + G ++ D + VF +++E++  SWN ++    + G +D A+  + RM
Sbjct: 128 SVELGNAFLAMFVRFG-NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM 186

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           +    V+P  +T   V   C  +     L  GR+VH + +R G E +  ++NAL+ MY K
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIP---DLARGREVHVHVVRYGYELDIDVVNALITMYVK 243

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G V  A+ LF     RD++SWN ++S   +N    E +     M    + PD +++ SV
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSV 303

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           + AC  L     G++IHAY +     +D S V ++L  MY          ++F  +  K 
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDIS-VCNSLTQMYLYAGSWREAEKLFSRMDCKD 362

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           I  W  MI+GY  N   E+A+  + +M +   + P+  T+++V+ AC           +H
Sbjct: 363 IVSWTTMISGYEYNFLPEKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             AIK  L     V N L++MYS+   I+ +  IF ++  ++ +SW ++I G  +  +  
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL+  R+M+                  +  +PN+ITL   L  C  + AL  GKEIHA+
Sbjct: 482 EALIFFRQMK------------------MTLQPNAITLTAALAACARIGALMCGKEIHAH 523

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            +R  +  D  + +AL+DMY +CG +N A   F+    ++V +WN+++  Y   G+G  V
Sbjct: 524 VLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERGQGSVV 582

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           +EL   MV        V+P+E+TFI+L   C  S MV +G+  F KM ++YG+ P+  HY
Sbjct: 583 VELFDRMVK-----ARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHY 636

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           ACVVDLLGRAG++++A++ I  MP   D A  W +LL ACRIH N+++GE++AQ +F L+
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPA-VWGALLNACRIHHNIDLGELSAQRIFELD 695

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
                +Y+LL N+Y+    W +   VR+ MKE G+  + GCSW+E   ++H FL+ D  H
Sbjct: 696 KGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755

Query: 770 QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPP 829
            Q+++++  L+   E+M + G    +     +  E  ++ + CGHSE+ AIAFG++N+ P
Sbjct: 756 PQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVP 815

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           G  I V KNL +C  CH   KFISK   REI +RD   FHHFK+G CSCGD
Sbjct: 816 GMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 183/565 (32%), Positives = 283/565 (50%), Gaps = 36/565 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +   A+   F EAI  Y  M     ++PD + FP VL+   GI DL+ G+++H H
Sbjct: 162 SWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVH 221

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV+YGY L  + V N L+ MY KCG D+     +FDR+  +D +SWN+MI+     G   
Sbjct: 222 VVRYGYEL-DIDVVNALITMYVKCG-DVKSARLLFDRMPRRDIISWNAMISGYFENGMGH 279

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             L+ F  M   +V+P   TL SV  AC  L  R   RLGR +H   +  G   +  + N
Sbjct: 280 EGLKLFFAMRGLSVDPDLMTLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCN 336

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MY   G   +A+ LF   + +D+VSW T++S    N    +A+   R M    +KP
Sbjct: 337 SLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKP 396

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D +++A+VL AC+ L  LDTG E+H  A++   LI    V + L++MY  C+ ++    +
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKAR-LISYVIVANNLINMYSKCKCIDKALDI 455

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  I  K +  W ++I G   N    EAL+ F +M+    L PNA T+++ + AC R  A
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT--LQPNAITLTAALAACARIGA 513

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH H ++ G+G D ++ NAL+DMY R GR+ I+   F+  + +D  SWN ++TG
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTG 572

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y+  GQ    + L   M                    R +P+ IT +++L GCG    + 
Sbjct: 573 YSERGQGSVVVELFDRMVKA-----------------RVRPDEITFISLLCGCGKSQMVR 615

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           +G    +      +  ++   + +VD+  + G L  A +    MPV  +   W  ++ A 
Sbjct: 616 QGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675

Query: 581 GMH-----GE--GQEVLELLKNMVA 598
            +H     GE   Q + EL K  V 
Sbjct: 676 RIHHNIDLGELSAQRIFELDKGSVG 700



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           LR   +    + ++  C    A  +G ++++ A+ +M +  V +G+A + M+ + G L  
Sbjct: 88  LRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVD 147

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  VF  M  RN+ +WNV++  Y   G   E + L   M+  G     VKP+  TF  + 
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG----VKPDVYTFPCVL 203

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             C     ++ G ++   +   YG E   D    ++ +  + G V+ A  L + MP
Sbjct: 204 RTCGGIPDLARGREVHVHVV-RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/812 (34%), Positives = 431/812 (53%), Gaps = 43/812 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD-----MWDVYKVFDRITEKDQVSW--N 149
           KQ+H  + K G      T+   LVN   +  S          +++F      D   +  N
Sbjct: 42  KQLHCQITKNGLDQIPSTLTK-LVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLN 100

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           S+I      G    A+  +  ML   V P+ +T   V   C+ ++       G QVHG+ 
Sbjct: 101 SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIA---AFCEGIQVHGSV 157

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +++G E + FI N L+  YA+ G +D    +F+   +R++VSW +++   ++ D+  EAV
Sbjct: 158 VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAV 217

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
               +M   GI+P  V++  V+ AC+ L  LD G+ + AY     + ++   V +ALVDM
Sbjct: 218 SLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV-NALVDM 276

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  ++  +R+FD   D+ + L+N +++ Y +     EAL +  +M +  G  P+  T
Sbjct: 277 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ-QGPRPDRVT 335

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           M S + A  +       +  HG+ I+ GL     + N ++DMY + G+ E++  +FD M 
Sbjct: 336 MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS 395

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN------------RNNVYDLDET 496
            +  VSWN++  G+   G    A     E+ N   E+N            + ++++    
Sbjct: 396 NKTVVSWNSLTAGFIRNGDVESAW----EVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451

Query: 497 VLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           + R       K + +T+M +   CG L A    K +H Y  +N +  D+ + +ALVDM+A
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           +CG    A +VF+ M  R+V  W   I    M G G+    L   M+ +G     VKP+ 
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQG-----VKPDV 566

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           V F+ +  ACSH G V +G+ +F  M +D+GI P  +HY C+VDLLGRAG + +A+ LI 
Sbjct: 567 VLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIK 625

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP E +    W SLL ACR+H+NVE+   AA+ +  L P  A  +VLLSNIY+SA  W 
Sbjct: 626 SMPMEPNDV-VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWT 684

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
               VR  ++E GVRK PG S ++    IH+F +GD SH +   +   L+ ++ R    G
Sbjct: 685 DVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAG 744

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           ++PD S VL +V+E+EKE LL  HSEKLAIAFG++ T     IRV KNLR+C+DCH   K
Sbjct: 745 HIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAK 804

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             S I +REII+RD  RFH F+ G CSC DYW
Sbjct: 805 MASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 268/571 (46%), Gaps = 63/571 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  + +   REAIL Y+ M    + P+++ FP VL     I     G Q+H  VVK G 
Sbjct: 103 IRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGL 162

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
               V + N L++ Y +CG  M   +KVF+ ++E++ VSW S+I    R  +   A+  F
Sbjct: 163 E-EDVFIQNCLIHFYAECGH-MDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
             M+ + + PSS T+V V  AC+ L  RD L +G +V      +G + N  ++NAL+ MY
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKL--RD-LDMGERVCAYIGELGLKLNKVMVNALVDMY 277

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
            K G +D AK LF    DR+LV +NTI+S+ ++     EA+  L +M  +G +PD V++ 
Sbjct: 278 MKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTML 337

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S + A + L  L  GK  H Y +RN +   +S +G+ ++DMY  C + E   RVFD +S+
Sbjct: 338 SAISASAQLVDLFYGKVCHGYVIRNGLEGWDS-IGNVIIDMYMKCGKPEMACRVFDLMSN 396

Query: 348 KKI-------------------------------ALWNAMITGYGQNEYDEEALMLFIKM 376
           K +                                 WN MI+G  Q    E+A+ LF +M
Sbjct: 397 KTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREM 456

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           +   G+  +  TM  +  AC    A    + +H +  K G+  D  +  AL+DM++R G 
Sbjct: 457 QG-EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGD 515

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
            + +  +F+ M  RD  +W   I    + G    A  L  +M                  
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQM-----------------L 558

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
           +   KP+ +  + VL  C     + +G  I +    + ++  +     +VD+  + G L 
Sbjct: 559 IQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLL- 617

Query: 557 FARRVFDL---MPVR-NVITWNVIIMAYGMH 583
             R  FDL   MP+  N + W  ++ A  +H
Sbjct: 618 --REAFDLIKSMPMEPNDVVWGSLLAACRVH 646



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 215/462 (46%), Gaps = 46/462 (9%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +   AR ++ +EA+  + EM  + I+P +     V+ A A ++DL +
Sbjct: 191 GMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDM 250

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+++ A++ + G  L+ V V N LV+MY KCG+ +    ++FD   +++ V +N++++  
Sbjct: 251 GERVCAYIGELGLKLNKVMV-NALVDMYMKCGA-IDAAKRLFDECVDRNLVLYNTILSNY 308

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-- 213
            R G    AL     ML     P   T++S   A + L     L  G+  HG  +R G  
Sbjct: 309 ARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLV---DLFYGKVCHGYVIRNGLE 365

Query: 214 EWNTFIMNALMAMYAKLGR-------------------------------VDDAKTLFKS 242
            W++ I N ++ MY K G+                               V+ A  +F  
Sbjct: 366 GWDS-IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQ 424

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +R+ V WNT++S L Q   F +A+   R+M   GIK D V++  +  AC +L   +  
Sbjct: 425 IPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K +H Y  +N I  D   + +ALVDM+  C + +   +VF+ ++++ ++ W A I     
Sbjct: 485 KWVHTYIEKNGIPCDMR-LNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAM 543

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
               E A  LF +M  + G+ P+      V+ AC  S     ++G+H  ++    G    
Sbjct: 544 EGNGEGATGLFNQM-LIQGVKPDVVLFVQVLTAC--SHGGQVEQGLHIFSLMEDHGISPQ 600

Query: 423 VQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
           +++   ++D+  R G +  +  +   M +  + V W +++  
Sbjct: 601 IEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/716 (37%), Positives = 386/716 (53%), Gaps = 67/716 (9%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +L+A  A  GR+ DA   F +     RD V  N ++S+ ++      AV     +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 279 -IKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRNDILIDNSFVGSALVDMYCNCR-- 333
            ++PD  S  +++ A   +  L      ++H   L++      S V +AL+ +Y  C   
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLS-VSNALIALYMKCDTP 214

Query: 334 --------------------------------EVECGRRVFDFISDKKIALWNAMITGYG 361
                                           +V   R VF+ +  K   +WNAMI+GY 
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 362 QNEYDEEALMLFIKMEEVAGLWP-NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG-- 418
           Q+    +A  LF +M  V+   P +  T +SV+ AC  +  F   + +HG  I+L     
Sbjct: 275 QSGMCADAFELFRRM--VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332

Query: 419 --RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                 V NAL+ +YS+ G+I I+K IFD M ++D VSWNT+++GY   G    A+ + +
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 392

Query: 477 EMQNMEEEKNRNNVYD-----LDETVLR---------PKPNSITLMTVLPGCGALSALAK 522
            M    +      V       L E  L+          KP   T    +  CG L AL  
Sbjct: 393 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 452

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+++HA+ ++         G+AL+ MYAKCG +N AR VF +MP  + ++WN +I A G 
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E LEL   MVAEG     + P+ ++F+ +  AC+H+G+V EG   F  MK D+GI
Sbjct: 513 HGHGREALELFDQMVAEG-----IDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 567

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P  DHYA ++DLLGR+G++ +A  LI  MP E      W ++L  CR + ++E G  AA
Sbjct: 568 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE-PTPSIWEAILSGCRTNGDMEFGAYAA 626

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             LF + P     Y+LLSN YS+A  W  A  VRK M++ GV+KEPGCSWIE G +IH F
Sbjct: 627 DQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVF 686

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD  H ++++++ FLE +  RMRK GYVPDT  VLH++   EKE +L  HSEKLA+ F
Sbjct: 687 LVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGF 746

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           G+L  PPG T+ V KNLR+C DCH A  F+SK   REI++RDVRRFHHFK+G CSC
Sbjct: 747 GLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 233/538 (43%), Gaps = 105/538 (19%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS---------------YIEMT 69
           PAT+  +      + R   ++ +++    R      A++S               +  + 
Sbjct: 94  PATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG 153

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
              ++PD+++F A++ AV  + +L+     Q+H  V+K G   + ++V+N L+ +Y KC 
Sbjct: 154 SGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSG-AAAVLSVSNALIALYMKCD 212

Query: 128 SD--MWDVYKVFDRITEKDQVSWNSMIATLCRF--------------GKWDL-------- 163
           +    WD  KV D + +KD ++W +M+    R               GK+D+        
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272

Query: 164 ---------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--- 211
                    A E FR M+   V    FT  SV  AC+N         G+ VHG  +R   
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGF---FVHGKSVHGQIIRLQP 329

Query: 212 --VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN---DKFLE 266
             V E    + NAL+ +Y+K G++  AK +F +   +D+VSWNTI+S    +   DK +E
Sbjct: 330 NFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 389

Query: 267 ----------------------------AVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
                                       A+    QM    +KP   + A  + AC  L  
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 449

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  G+++HA+ ++      NS  G+AL+ MY  C  V   R VF  + +     WNAMI+
Sbjct: 450 LKHGRQLHAHLVQCGFEASNS-AGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMIS 508

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-----GHAI 413
             GQ+ +  EAL LF +M    G+ P+  +  +++ AC  + A    EG H         
Sbjct: 509 ALGQHGHGREALELFDQM-VAEGIDPDRISFLTILTAC--NHAGLVDEGFHYFESMKRDF 565

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
            +  G D Y +  L+D+  R GRI  ++ +   M    T S W  +++G   C  +GD
Sbjct: 566 GISPGEDHYAR--LIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG---CRTNGD 618


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/627 (40%), Positives = 364/627 (58%), Gaps = 55/627 (8%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNC---REVECGRRVFDFISDKKIALWNAMITGY 360
           +IHA  ++   L  N+FV + L+     C    ++   R VFD I      +WN MI  Y
Sbjct: 21  QIHALIIKTS-LDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
             ++  +E++ LF +M     +  ++ ++S V+ AC R +   + + +H   +K+GLG D
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 421 RYVQNALMDMYSRMGRIEISKTI-------------------------------FDDMEV 449
            +V+ AL++MY++ G IEI++ I                               FD M  
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLRE------------MQNMEEEKNRNNVYDL--DE 495
           RD VSWNTMI G+   G  G A  L               +    + +  N    L  + 
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
            +    P+ +T+++VL  CG + AL  GK IH    RN +  D+ +G++LVDMYAKCG +
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDI 319

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + + RVF+ M  R+V  W+ +IM    HG G+  L+    M++E     ++KPN+VTFI 
Sbjct: 320 DNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE-----DIKPNDVTFIG 374

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           + +ACSH G+V EG   F  M   Y + P  +HY CVVD+LGRAG++++A +LI  MP  
Sbjct: 375 VLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFA 434

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            D A  W +LLGACRI++NVEI E A  NL  LEP V  +YVLLSNIYS A+ WDK ++V
Sbjct: 435 PD-AIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNV 493

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           R+ MK + ++K PG S IE  + +H+F+AGD SH +S+++   L  ++ R++  GY P T
Sbjct: 494 RRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLT 553

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
           + VL + +E+EKE  L  HSEKLAIAFG+L+T PG+TIR+ KNLRVC+DCH A K IS+ 
Sbjct: 554 ASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRT 613

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             R II+RD  RFHHF NG+CSC DYW
Sbjct: 614 YKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 50/355 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +R+   S   +E++  + +M   +  P D+++   V++A   ++D   G+++H  V
Sbjct: 72  WNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQV 131

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G G S + V   L+ MY K G D+     + D +   D V +N ++A   R G+ +L
Sbjct: 132 LKIGLG-SDLFVETALIEMYAKFG-DIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINL 189

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A + F  M                        RD              +  WNT I    
Sbjct: 190 AHDLFDRM----------------------PERD--------------LVSWNTMIHG-- 211

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
              +A LG V  AK LF    +RDL+SW++++++ ++  +  EA+    +M L  + PD 
Sbjct: 212 ---HASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDK 268

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++ SVL AC  +  L  GK IH    RN I ID   +G++LVDMY  C +++   RVF+
Sbjct: 269 VTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLK-LGTSLVDMYAKCGDIDNSLRVFN 327

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPAC 396
            ++++ +  W+AMI G   + + E AL  F KM  E++    PN  T   V+ AC
Sbjct: 328 GMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIK---PNDVTFIGVLSAC 379



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 7/188 (3%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT+++ +   G D+    K+FDR  E+D +SW+SMIA   +  + + AL  F  M  +NV
Sbjct: 206 NTMIHGHASLG-DVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANV 264

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
            P   T+VSV  AC ++     L +G+ +H    R   E +  +  +L+ MYAK G +D+
Sbjct: 265 LPDKVTMVSVLSACGDVG---ALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDN 321

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE-AVMFLRQMALRGIKPDGVSIASVLPACS 294
           +  +F    +RD+ +W+ ++  L+ N  F E A+    +M    IKP+ V+   VL ACS
Sbjct: 322 SLRVFNGMNNRDVFAWSAMIMGLA-NHGFGELALDHFSKMISEDIKPNDVTFIGVLSACS 380

Query: 295 HLEMLDTG 302
           H+ ++D G
Sbjct: 381 HIGLVDEG 388



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 52/315 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++ Q  EA+  + EM  +++ PD     +VL A   +  L +GK IH  +
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI 294

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +    +  + +  +LV+MY KCG D+ +  +VF+ +  +D  +W++MI  L   G  +L
Sbjct: 295 ERNRIEI-DLKLGTSLVDMYAKCG-DIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL+ F  M+  +++P+  T + V  ACS+                               
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSH------------------------------- 381

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                 +G VD+  T F S      VS     +  +V  L +  +  EA+  ++ M    
Sbjct: 382 ------IGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPF-- 433

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE---V 335
             PD +   ++L AC   + ++  +E     L  +  +D ++V   L ++Y   +E   V
Sbjct: 434 -APDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYV--LLSNIYSQAKEWDKV 490

Query: 336 ECGRRVFDFISDKKI 350
              RR+   I+ +K+
Sbjct: 491 VNVRRMMKNINIQKV 505



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 154/385 (40%), Gaps = 95/385 (24%)

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY---SR 433
           ++V  L  NAT ++ ++              IH   IK  L  + +V   L+      S 
Sbjct: 4   KKVMSLLQNATKLNQIIQ-------------IHALIIKTSLDGNNFVLAKLLRRLFACSS 50

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              +  ++++FD++   DT  WNTMI  Y       +++ L  +M++ E          +
Sbjct: 51  ANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQE-------CIPI 103

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           D         S +L  V+  CG L     G+++H   ++  L +D+ V +AL++MYAK G
Sbjct: 104 D---------SYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFG 154

Query: 554 CLNFARRV-------------------------------FDLMPVRNVITWNVIIMAYGM 582
            +  AR +                               FD MP R++++WN +I  +  
Sbjct: 155 DIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHAS 214

Query: 583 HGEGQEVLELL-----------KNMVAEGSRG---------------GEVKPNEVTFIAL 616
            G+     +L             +M+A  ++                  V P++VT +++
Sbjct: 215 LGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
            +AC   G +  G  + ++  +   IE        +VD+  + G ++++ ++ N M    
Sbjct: 275 LSACGDVGALGMG-KMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR- 332

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIA 701
               AWS+++     H     GE+A
Sbjct: 333 -DVFAWSAMIMGLANHG---FGELA 353


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 295/942 (31%), Positives = 467/942 (49%), Gaps = 121/942 (12%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +   A      ++   +  M R  + PD +   +VL+A A    L +  QIH  +
Sbjct: 160  SWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGII 219

Query: 104  VKYGYGLSSV----------------------------------------------TVAN 117
             + GYG   +                                              T+ N
Sbjct: 220  TQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGN 279

Query: 118  TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG------------------ 159
             L++MY K G ++ D  + FD + EK+ +SW S+I+   + G                  
Sbjct: 280  ALIDMYAKSG-EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRN 338

Query: 160  --KWDLALEAF-RMMLYS------------NVEPSSFTLVSVALACSNLSRRDGLRL--G 202
               W   L  + R+ LY              VEP+ F + S+  ACS    R G     G
Sbjct: 339  EASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACS----RSGYMADEG 394

Query: 203  RQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
             QVHG  ++ G   + ++  AL+  Y  +G V +A+ LF+   D ++VSW +++   S +
Sbjct: 395  FQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS 454

Query: 262  DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                E +   ++M   G+  +  + A+V  +C  LE    G ++  + ++     D+  V
Sbjct: 455  GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYG-FEDSVSV 513

Query: 322  GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
             ++L+ M+ +   VE    VFD +++  I  WNAMI+ Y  +    E+L  F  M  +  
Sbjct: 514  ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 573

Query: 382  LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
               N+TT+SS++  C   +      GIHG  +KLGL  +  + N L+ +YS  GR E ++
Sbjct: 574  E-TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632

Query: 442  TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM------------------EE 483
             +F  M  RD +SWN+M+  Y   G+  D L +L E+  M                  EE
Sbjct: 633  LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEE 692

Query: 484  EKNRNNVYDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                   Y L    +R K  P +   M  L     L+ L +G+++H   I+    +D+ V
Sbjct: 693  PNEAVKAYKL----IREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHV 748

Query: 542  GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
             +A +DMY KCG ++   ++      R+ ++WN++I A+  HG  Q+  E    M+  G 
Sbjct: 749  TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 808

Query: 602  RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                 KP+ VTF++L +AC+H G+V EG+  +  M  ++G+ P  +H  C++DLLGR+G+
Sbjct: 809  -----KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGR 863

Query: 662  VEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            +  A   I  MP P  D   AW SLL ACRIH N+E+    A++L  L+P   S YVL S
Sbjct: 864  LSHAEGFIKEMPVPPNDL--AWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 921

Query: 721  NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            N+ +++  W+   ++RK+M    ++K+P CSW++  D++H F  G+  H Q+ ++   L 
Sbjct: 922  NVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLG 981

Query: 781  NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
             L +  ++ GYVPDTS  LH+++EE+KE  L  HSE+LA+AFG++NTP  +T+R+ KNLR
Sbjct: 982  ELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLR 1041

Query: 841  VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            VC DCH   KF+S I  R+I+LRD  RFHHF  G CSCGDYW
Sbjct: 1042 VCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 241/582 (41%), Gaps = 143/582 (24%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G  IH H++  G+G S + +   L+  Y K G D+     VFD + E+  VSW +M++  
Sbjct: 49  GHLIHTHLITNGFG-SDLHLNTKLIIFYVKVG-DVIAARNVFDGMPERSVVSWTAMVSGY 106

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G+++ A   F  M +  V+ +                                    
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKAN------------------------------------ 130

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
                +AL+  ++K G+++DA  LF +  +RD+VSWN ++   +      ++    R M 
Sbjct: 131 -----HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 185

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIH--------------------AYA------ 309
             G+ PD  ++ SVL A +    L    +IH                    AYA      
Sbjct: 186 RGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 245

Query: 310 ---------LRNDILIDNSFV-----------GSALVDMYCNCREVECGRRVFDFISDKK 349
                    L+ D+    + +           G+AL+DMY    E+E  +R FD + +K 
Sbjct: 246 SAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKN 305

Query: 350 IALWNAMITGYGQNEYD---------------------------------EEALMLFIKM 376
           +  W ++I+GY ++ Y                                  EEA+ LF +M
Sbjct: 306 VISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM 365

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRM 434
             + G+ PN   ++S++ AC RS    D EG  +HG  +K G+  D YV  AL+  Y  +
Sbjct: 366 WGL-GVEPNGFMVASLITACSRSGYMAD-EGFQVHGFVVKTGILGDVYVGTALVHFYGSI 423

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  ++ +F++M   + VSW +++ GY+  G  G+ L + + M+      N+N      
Sbjct: 424 GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN------ 477

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                      T  TV   CG L     G ++  + I+      V V ++L+ M++    
Sbjct: 478 -----------TFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 526

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           +  A  VFD M   ++I+WN +I AY  HG  +E L     M
Sbjct: 527 VEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 568



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 147/616 (23%), Positives = 256/616 (41%), Gaps = 136/616 (22%)

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSN---VEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           S I + C  G+   AL+    +L SN   ++PS +  + +   C +   +   + G  +H
Sbjct: 3   SKIQSACNLGRLAEALK----LLSSNPTRLDPSLY--LKILQLCID---KKAKKQGHLIH 53

Query: 207 GNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            + +  G  +   +N  L+  Y K+G V  A+ +F    +R +VSW  +VS  SQN +F 
Sbjct: 54  THLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFE 113

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           +A +    M   G+K +                                         AL
Sbjct: 114 KAFVLFSDMRHCGVKAN----------------------------------------HAL 133

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VD +  C ++E    +F  + ++ +  WNAMI GY    + +++  +F  M    GL P+
Sbjct: 134 VDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLR-GGLVPD 192

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG--------------------------- 418
             T+ SV+ A            IHG   +LG G                           
Sbjct: 193 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 252

Query: 419 ----RDRY----------------VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
               +D +                + NAL+DMY++ G IE +K  FD+ME ++ +SW ++
Sbjct: 253 GMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 312

Query: 459 ITGYTI--CGQHGDALMLLREMQNMEEEK--------NRNNVYDLDETV--------LRP 500
           I+GY     G    A  +  EM++  E           R  +Y  +E V        L  
Sbjct: 313 ISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLY--EEAVGLFCQMWGLGV 370

Query: 501 KPNSITLMTVLPGCGALSALA-KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           +PN   + +++  C     +A +G ++H + ++  +  DV VG+ALV  Y   G +  A+
Sbjct: 371 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 430

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           ++F+ MP  NV++W  +++ Y   G   EVL + + M  EG  G     N+ TF  + ++
Sbjct: 431 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG-----NQNTFATVTSS 485

Query: 620 CSHSGMVSEGMDLFYKMKD---DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
           C     + E   L Y++      YG E S      ++ +      VE+A  + + M  E 
Sbjct: 486 CG----LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHM-NEC 540

Query: 677 DKAGAWSSLLGACRIH 692
           D   +W++++ A   H
Sbjct: 541 DII-SWNAMISAYAHH 555



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 268/624 (42%), Gaps = 71/624 (11%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQ 98
           R + SW   L    R   + EA+  + +M    ++P+ F   +++ A +    ++  G Q
Sbjct: 337 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 396

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  VVK G  L  V V   LV+ YG  G  +++  K+F+ + + + VSW S++      
Sbjct: 397 VHGFVVKTGI-LGDVYVGTALVHFYGSIGL-VYNAQKLFEEMPDHNVVSWTSLMVGYSDS 454

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G     L  ++ M    V  +  T  +V  +C  L  +    LG QV G+ ++ G E + 
Sbjct: 455 GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQYGFEDSV 511

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + N+L++M++    V++A  +F    + D++SWN ++S+ + +    E++     M   
Sbjct: 512 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 571

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             + +  +++S+L  CS ++ L  G+ IH   ++   L  N  + + L+ +Y      E 
Sbjct: 572 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRSED 630

Query: 338 GRRVFDFISDKKI----------------------------------ALWNAMITGYGQN 363
              VF  ++++ +                                    WNA+I G+ +N
Sbjct: 631 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAEN 690

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           E   EA+  +  + E  G+  N  TM S+  A        + + +HG  IKLG   D +V
Sbjct: 691 EEPNEAVKAYKLIRE-KGIPANYITMVSLA-ATANLAVLEEGQQLHGLVIKLGFESDLHV 748

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NA MDMY + G +     +      R  +SWN +I+ +   G    A     EM     
Sbjct: 749 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLK--- 805

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVG 542
                         L PKP+ +T +++L  C     + +G   +    R   +   +   
Sbjct: 806 --------------LGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHC 851

Query: 543 SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
             ++D+  + G L+ A      MPV  N + W  ++ A  +HG  +   +  ++++    
Sbjct: 852 VCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLL---- 907

Query: 602 RGGEVKPNEVTFIALFA-ACSHSG 624
              E+ P++ +   L++  C+ SG
Sbjct: 908 ---ELDPSDDSAYVLYSNVCATSG 928



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 108/401 (26%)

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++  C+  +A      IH H I  G G D ++   L+  Y ++G +  ++ +FD M  R 
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSW  M++GY+  G+   A +L  +M++                               
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRH------------------------------- 124

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             CG                       V    ALVD ++KCG +  A  +F  M  R+V+
Sbjct: 125 --CG-----------------------VKANHALVDFHSKCGKMEDASYLFGTMMERDVV 159

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMV----------------AEGSRGGEVKPNEVTFIA 615
           +WN +I  Y + G   +   + ++M+                A    GG +  N++  I 
Sbjct: 160 SWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGII 219

Query: 616 --------------LFAACSHSGMVSEGMDLFYKM--KDDYGIEPSPDHYA--------- 650
                         L  A + +G +    DL   M  KD +        YA         
Sbjct: 220 TQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGN 279

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA-AQNLF--L 707
            ++D+  ++G++EDA +  + M  E     +W+SL+     H     G +A A+ +F  +
Sbjct: 280 ALIDMYAKSGEIEDAKRAFDEM--EEKNVISWTSLISGYAKHG---YGHMAHARYVFDEM 334

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
              + AS   +LS  Y    L+++A+ +  +M  +GV  EP
Sbjct: 335 RHRNEASWSTMLSG-YVRVGLYEEAVGLFCQMWGLGV--EP 372



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 33/243 (13%)

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + +L  C    A  +G  IH + I N   +D+ + + L+  Y K G +  AR VFD MP 
Sbjct: 34  LKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE 93

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+V++W  ++  Y  +G  ++   L  +M     R   VK N     AL    S  G + 
Sbjct: 94  RSVVSWTAMVSGYSQNGRFEKAFVLFSDM-----RHCGVKANH----ALVDFHSKCGKME 144

Query: 628 EGMDLFYKMKD-----------DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
           +   LF  M +            Y ++   D   C+   + R G V D Y L +++    
Sbjct: 145 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 204

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
           +  G    L+ A +IH  +         L     D+ +   LL N Y+       A D+R
Sbjct: 205 EGGG----LIIANQIHGII-------TQLGYGSYDIVTG--LLINAYAKNGSLRSAKDLR 251

Query: 737 KKM 739
           K M
Sbjct: 252 KGM 254


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 403/717 (56%), Gaps = 62/717 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F++ ++ +L+ WNT+    
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           + +   + A+     M   G+ P+  +   +L +C+  +    G++IH + L+    +D 
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD- 137

Query: 319 SFVGSALVDMYCNCREVECGRRVFD---------------------FISD---------- 347
            +V ++L+ MY     +E  R+VFD                     +I+           
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 197

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  WNAMI+GY +   ++EAL LF +M +   + P+ +TM SVV AC +S +      
Sbjct: 198 KDVVSWNAMISGYAETGNNKEALELFKEMMKT-NVRPDESTMVSVVSACAQSASIELGRQ 256

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H      G G +  + NAL+D+Y + G +E +  +F+ +  +D +SWNT+I GYT    
Sbjct: 257 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 316

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           + +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH
Sbjct: 317 YKEALLLFQEMLRSGES-----------------PNDVTMLSILPACAHLGAIEIGRWIH 359

Query: 528 AYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
            Y  + +  +A      ++L+DMYAKCG +  A++VFD +  R++ +WN +I  + MHG 
Sbjct: 360 VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 419

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
                ++   M     R  E++P+++TF+ L +ACSHSGM+  G  +F  MK+DY I P 
Sbjct: 420 ANAAFDIFSRM-----RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 474

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HY C++DLLG +G  ++A ++IN M  E D    W SLL AC+++ NVE+GE  AQNL
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMYANVELGESYAQNL 533

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             +EP     YVLLSNIY++A  W++   +R  + + G++K PGCS IE    +H+F+ G
Sbjct: 534 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H ++ +++G LE +   + + G+VPDTS VL  + EE KE  L  HSEKLAIAFG++
Sbjct: 594 DKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 653

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 654 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 199/388 (51%), Gaps = 39/388 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+ + FP +LK+ A  +    G+QIH HV+
Sbjct: 71  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--SDMWDVY---------------------------- 134
           K GY L  + V  +L++MY + G   D   V+                            
Sbjct: 131 KLGYDLD-LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQ 189

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD I  KD VSWN+MI+     G    ALE F+ M+ +NV P   T+VSV  AC   +
Sbjct: 190 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC---A 246

Query: 195 RRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +   + LGRQVH   +    G  N  I+NAL+ +Y K G V+ A  LF+    +D++SWN
Sbjct: 247 QSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  ++M   G  P+ V++ S+LPAC+HL  ++ G+ IH Y  + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 365

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S   ++L+DMY  C ++E  ++VFD I ++ ++ WNAMI G+  +     A  
Sbjct: 366 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +F +M +   + P+  T   ++ AC  S
Sbjct: 426 IFSRMRK-NEIEPDDITFVGLLSACSHS 452



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 144/268 (53%), Gaps = 14/268 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +   +EA+  + EM +++++PD     +V+ A A    + LG+Q+H+ +
Sbjct: 202 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 261

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG ++     +F+ ++ KD +SWN++I        +  
Sbjct: 262 DDHGFG-SNLKIVNALIDLYIKCG-EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA- 222
           AL  F+ ML S   P+  T++S+  AC++L     + +GR +H   + + +    + NA 
Sbjct: 320 ALLLFQEMLRSGESPNDVTMLSILPACAHLG---AIEIGRWIH---VYINKRLKGVANAS 373

Query: 223 -----LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                L+ MYAK G ++ A+ +F S  +R L SWN ++   + + +   A     +M   
Sbjct: 374 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 433

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
            I+PD ++   +L ACSH  MLD G+ I
Sbjct: 434 EIEPDDITFVGLLSACSHSGMLDLGRHI 461


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/586 (41%), Positives = 349/586 (59%), Gaps = 29/586 (4%)

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+++H  A+R+ +   + F  SAL+ MY +C      R+ FD I      +  AM +GY 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD---KEGIHGHAIKLGLG 418
           +N     +L LF K+  +A     A   ++ + A   S   PD      +H   +K GL 
Sbjct: 168 RNNLVYPSLALFRKL--IASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLD 225

Query: 419 RDRYVQNALMDMYSRMGRIEI--SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
            D  V N ++D Y++ GR ++  ++ +FD ME +D VSWN+MI  Y   G   DAL L R
Sbjct: 226 GDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYR 284

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           +M N+                   K N++TL  +L  C     +  GK IH   +R  L 
Sbjct: 285 KMLNVSGSI---------------KCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLE 329

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            +V VG+++VDMY+KCG +  AR+ F  +  +N+++W+ +I  YGMHG GQE L++   M
Sbjct: 330 ENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEM 389

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
              G       PN +TFI++ AACSH+G++ +G   +  MK  +GIEP  +HY C+VDLL
Sbjct: 390 CRSGQ-----NPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLL 444

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG +++AY LI  M  + D A  W +LL ACRIH+NVE+ EI+A+ LF L+     +Y
Sbjct: 445 GRAGCLDEAYGLIKEMKVKPD-AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYY 503

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLLSNIY+ A +W     +R  +K  G+ K PG S +E     H F  GD SH Q ++++
Sbjct: 504 VLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIY 563

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            +L  L E+M++ GYVP+T  VLH+++EEEK + L  HSEKLAIAF ++N+ PG+ I V 
Sbjct: 564 SYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVI 623

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH A K I+KI  REII+RD++RFHHFK+G+CSCGDYW
Sbjct: 624 KNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 196/377 (51%), Gaps = 14/377 (3%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+H   ++ G   S    A+ L++MY  C   + D  K FD I   + V   +M +  
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPI-DARKAFDEIPSPNPVIITAMASGY 166

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R      +L  FR ++ S    ++    +  +A S  +R     +   +H   ++ G +
Sbjct: 167 VRNNLVYPSLALFRKLIASG-SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLD 225

Query: 215 WNTFIMNALMAMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            +  ++N ++  YAK GR D   A+ +F + E +D+VSWN++++  +QN    +A+   R
Sbjct: 226 GDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYR 284

Query: 273 QM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           +M      IK + V+++++L AC+H   + TGK IH   +R   L +N +VG+++VDMY 
Sbjct: 285 KMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMG-LEENVYVGTSVVDMYS 343

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  VE  R+ F  I +K I  W+AMITGYG + + +EAL +F +M   +G  PN  T  
Sbjct: 344 KCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCR-SGQNPNYITFI 402

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDME 448
           SV+ AC  +    DK     +A+K   G +  V++   ++D+  R G ++ +  +  +M+
Sbjct: 403 SVLAACSHA-GLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK 461

Query: 449 VR-DTVSWNTMITGYTI 464
           V+ D   W  +++   I
Sbjct: 462 VKPDAAIWGALLSACRI 478



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 9/232 (3%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVY 134
           D  A      A A I D  +   +HA VVK G       V NT+++ Y K G  D+    
Sbjct: 192 DEAAALVAFSASARIPDCGITSSLHALVVKTGLD-GDAGVVNTMLDAYAKGGRRDLGAAR 250

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML--YSNVEPSSFTLVSVALACSN 192
           KVFD + EKD VSWNSMIA   + G    AL  +R ML    +++ ++ TL ++ LAC++
Sbjct: 251 KVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAH 309

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                 ++ G+ +H   +R+G E N ++  +++ MY+K GRV+ A+  F+  ++++++SW
Sbjct: 310 AGT---IQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSW 366

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           + +++    +    EA+    +M   G  P+ ++  SVL ACSH  +LD G+
Sbjct: 367 SAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGR 418


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/734 (34%), Positives = 418/734 (56%), Gaps = 37/734 (5%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           + +R    W   +R+ + +  F +   +Y  M R+ ++PD   +P VLK  +   ++  G
Sbjct: 98  AYSRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKG 156

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++H    K G+    V V NTL+  YG CG    D  KVFD + E+D+VSWN++I    
Sbjct: 157 REVHGVAFKLGFD-GDVFVGNTLLAFYGNCGL-FGDAMKVFDEMPERDKVSWNTVIGLCS 214

Query: 157 RFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
             G ++ AL  FR+M+ +   ++P   T+VSV   C+    +    + R VH  +L+VG 
Sbjct: 215 LHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDK---VMARIVHCYALKVGL 271

Query: 215 WNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
               +   NAL+ +Y K G    +K +F   ++R+++SWN I++S S   K+++A+   R
Sbjct: 272 LGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFR 331

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M   G++P+ V+I+S+LP    L +   G E+H ++L+  I  D  F+ ++L+DMY   
Sbjct: 332 LMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESD-VFISNSLIDMYAKS 390

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
                   +F+ +  + I  WNAMI  + +N  + EA+ L ++  +  G  PN  T ++V
Sbjct: 391 GSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVEL-VRQMQAKGETPNNVTFTNV 449

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PAC R       + IH   I++G   D +V NAL DMYS+ G + +++ +F+ + VRD 
Sbjct: 450 LPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDE 508

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VS+N +I GY+      ++L L  EM+                 +L  +P+ ++ M V+ 
Sbjct: 509 VSYNILIIGYSRTNDSLESLRLFSEMR-----------------LLGMRPDIVSFMGVVS 551

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            C  L+ + +GKEIH   +R +  T + V ++L+D+Y +CG ++ A +VF  +  ++V +
Sbjct: 552 ACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVAS 611

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I+ YGM GE    + L + M  +G     V+ + V+F+A+ +ACSH G++ +G   
Sbjct: 612 WNTMILGYGMRGELDTAINLFEAMKEDG-----VEYDSVSFVAVLSACSHGGLIEKGRK- 665

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           ++KM  D  IEP+  HYAC+VDLLGRAG +E+A  LI  +    D    W +LLGACRIH
Sbjct: 666 YFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPD-TNIWGALLGACRIH 724

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            N+E+G  AA++LF L+P    +Y+LLSN+Y+ A+ WD+A  VR+ MK  G +K PGCSW
Sbjct: 725 GNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSW 784

Query: 753 IEFGDEIHKFLAGD 766
           ++ GD +H FL G+
Sbjct: 785 VQVGDLVHAFLVGE 798



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 180/556 (32%), Positives = 292/556 (52%), Gaps = 32/556 (5%)

Query: 81  PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI 140
           P +L+       LS  KQ+HA+ + +G+   SV++  +L+  Y   G     +      +
Sbjct: 38  PNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSV 97

Query: 141 T-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
              +    WN++I      G +D     +  M+ + V+P   T   V   CS+      +
Sbjct: 98  AYSRSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVE---V 153

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           R GR+VHG + ++G + + F+ N L+A Y   G   DA  +F    +RD VSWNT++   
Sbjct: 154 RKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLC 213

Query: 259 SQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           S +  + EA+ F R M  A  GI+PD V++ SVLP C+  E     + +H YAL+  +L 
Sbjct: 214 SLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLG 273

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            +  VG+ALVD+Y  C   +  ++VFD I ++ +  WNA+IT +       +AL +F  M
Sbjct: 274 GHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLM 333

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            +  G+ PN+ T+SS++P       F     +HG ++K+ +  D ++ N+L+DMY++ G 
Sbjct: 334 ID-EGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGS 392

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
             I+ TIF+ M VR+ VSWN MI  +       +A+ L+R+MQ   E             
Sbjct: 393 SRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGE------------- 439

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN++T   VLP C  L  L  GKEIHA  IR   + D+ V +AL DMY+KCGCLN
Sbjct: 440 ----TPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLN 495

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A+ VF++  VR+ +++N++I+ Y    +  E L L   M   G R     P+ V+F+ +
Sbjct: 496 LAQNVFNI-SVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMR-----PDIVSFMGV 549

Query: 617 FAACSHSGMVSEGMDL 632
            +AC++   + +G ++
Sbjct: 550 VSACANLAFIRQGKEI 565


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/638 (38%), Positives = 367/638 (57%), Gaps = 36/638 (5%)

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWN  +  L++   F EA+    QM   G  P+  +      +C+ L +   G ++H + 
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDE 367
           ++     +  FV ++L+ MYC C  +   R+VFD    S      +NA+I GY  N    
Sbjct: 83  IKTGCEPE-PFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           +A++LF +M +  G+  NA TM  ++P C           +H  +++ GL  D  V N L
Sbjct: 142 DAVLLFRQMRK-EGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCL 200

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           + MY R G ++ ++ +FD M  +  ++WN MI+GY   G  G  L L R+M+        
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF------- 253

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                   T + P P  +TL+ VL  C  L A A G+E+      +    +  + +AL++
Sbjct: 254 --------TGIVPDP--VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALIN 303

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYA+CG L  AR +FD M  +NVI+W  II  YGMHG+G+  ++L   M++      +  
Sbjct: 304 MYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISS-----DEL 358

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+   F+++ +ACSH+G+  +G+  F  M+ DYG++P P+HY+CVVDLLGRAG++E+A +
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  M  E D A  W +LLGAC+IH+NVE+ E+A + +   EP    +YVLLSNI+S A 
Sbjct: 419 LIGSMSVEPDGA-VWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAG 477

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
             +  + VR  M+E  ++KEPGCS++E+   IH FLAGD +H Q+++++  L+ L + ++
Sbjct: 478 NMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIK 537

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCG---HSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           + G   D      N  E   E L+ G   HSEKLAIAFG++NT PGT I V KNLRVC D
Sbjct: 538 RRGGSND------NDQESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGD 591

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH   K +S+I  R++++RD  RFHHFKNG CSC DYW
Sbjct: 592 CHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 208/431 (48%), Gaps = 22/431 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   LR  AR   F+EA+  Y +M  S   P+ F FP   K+ A +     G Q+H HV
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKW 161
           +K G       V  +L++MY KC S +    KVFD    +    V +N++IA      ++
Sbjct: 83  IKTGCEPEPF-VQTSLISMYCKC-STIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             A+  FR M    V  ++ T++ +   C+       L  G  +H  S+R G + +  + 
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIH---LGFGTSLHACSVRFGLDGDLSVG 197

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+ MY + G VD A+ LF    ++ L++WN ++S  +QN      +   R+M   GI 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD V++  VL +C+HL     G+E+      +     N F+ +AL++MY  C  +   R 
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGF-NPFLKNALINMYARCGNLVKARA 316

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +FD +++K +  W A+I GYG +   E A+ LF +M     L P+     SV+ AC  S 
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL-PDGAAFVSVLSAC--SH 373

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
           A   ++G++       + RD  +Q      + ++D+  R GR+E ++ +   M V  D  
Sbjct: 374 AGLTEKGLYYFT---AMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGA 430

Query: 454 SWNTMITGYTI 464
            W  ++    I
Sbjct: 431 VWGALLGACKI 441



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 203/408 (49%), Gaps = 42/408 (10%)

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           A WNA +    +  + +EAL L+ +M   +G  PNA T      +C           +HG
Sbjct: 22  ASWNARLRELARQRHFQEALNLYCQM-LASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD-MEVRD-TVSWNTMITGYTICGQH 468
           H IK G   + +VQ +L+ MY +   I  ++ +FD+    R+  V +N +I GY++  + 
Sbjct: 81  HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            DA++L R+M+               E V     N++T++ ++P C     L  G  +HA
Sbjct: 141 SDAVLLFRQMRK--------------EGV---SVNAVTMLGLIPVCAGPIHLGFGTSLHA 183

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
            ++R  L  D+ VG+ L+ MY +CG ++FAR++FD MP + +ITWN +I  Y  +G    
Sbjct: 184 CSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGH 243

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK-DDYGIEPSPD 647
           VL+L + M   G     + P+ VT + + ++C+H G  + G ++  +++   +G  P   
Sbjct: 244 VLDLYRKMEFTG-----IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK 298

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF- 706
           +   ++++  R G +  A  + + M  +     +W++++    +H     GE+A Q LF 
Sbjct: 299 N--ALINMYARCGNLVKARAIFDGMTEK--NVISWTAIIAGYGMHGQ---GELAVQ-LFD 350

Query: 707 -LLE----PDVASHYVLLSNIYSSAQLWDKAMDVRKKM-KEMGVRKEP 748
            ++     PD A+   +LS   S A L +K +     M ++ G++  P
Sbjct: 351 EMISSDELPDGAAFVSVLSAC-SHAGLTEKGLYYFTAMERDYGLQPGP 397


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/846 (33%), Positives = 452/846 (53%), Gaps = 45/846 (5%)

Query: 47  ESLRSEARSNQFREAILSY----IEMTRSD-IQP--DNFAFPAVLKAVAGIQDLSLGKQI 99
           ++ R   R N+ R+   S     +++  SD I P  D+ A+ A+L+      D    K I
Sbjct: 12  QTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAI 71

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  ++K G  L  +   N L+N Y K G D  D   +FD + E++ VS+ ++        
Sbjct: 72  HCDILKKGSCLD-LFATNILLNAYVKAGFDK-DALNLFDEMPERNNVSFVTLAQGYACQD 129

Query: 160 KWDLALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
              L     R     N    +SF  + V+L        D   +   +H   +++G + N 
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSL--------DKAEICPWLHSPIVKLGYDSNA 181

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+  AL+  Y+  G VD A+T+F+    +D+V W  IVS   +N  F +++  L  M + 
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G  P+  +  + L A   L   D  K +H   L+   ++D   VG  L+ +Y    ++  
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR-VGVGLLQLYTQLGDMSD 300

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             +VF+ +    +  W+ MI  + QN +  EA+ LFI+M E A + PN  T+SS++  C 
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AFVVPNEFTLSSILNGCA 359

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             +     E +HG  +K+G   D YV NAL+D+Y++  +++ +  +F ++  ++ VSWNT
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNT 419

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I GY   G+ G A  + RE         RN V              +T  + L  C +L
Sbjct: 420 VIVGYENLGEGGKAFSMFREAL-------RNQV----------SVTEVTFSSALGACASL 462

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           +++  G ++H  AI+   A  V V ++L+DMYAKCG + FA+ VF+ M   +V +WN +I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             Y  HG G++ L +L  M     +  + KPN +TF+ + + CS++G++ +G + F  M 
Sbjct: 523 SGYSTHGLGRQALRILDIM-----KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMI 577

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
            D+GIEP  +HY C+V LLGR+G+++ A +LI  +P E      W ++L A     N E 
Sbjct: 578 RDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE-PSVMIWRAMLSASMNQNNEEF 636

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
              +A+ +  + P   + YVL+SN+Y+ A+ W     +RK MKEMGV+KEPG SWIE   
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           ++H F  G   H   + ++G LE L+ +  + GYVPD + VL ++++EEK+  L  HSE+
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSER 756

Query: 818 LAIAFGILNTPPG-TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           LA+A+G++  P     I + KNLR+C+DCH A K IS I  R++++RD+ RFHHF  G C
Sbjct: 757 LALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVC 816

Query: 877 SCGDYW 882
           SCGD+W
Sbjct: 817 SCGDHW 822



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 10/359 (2%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK+   W   +     +  F +++     M  +   P+N+ F   LKA  G+      K 
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  ++K  Y L    V   L+ +Y + G DM D +KVF+ + + D V W+ MIA  C+ 
Sbjct: 269 VHGQILKTCYVLDP-RVGVGLLQLYTQLG-DMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G  + A++ F  M  + V P+ FTL S+   C+ + +  G  LG Q+HG  ++VG + + 
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSG--LGEQLHGLVVKVGFDLDI 383

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           ++ NAL+ +YAK  ++D A  LF     ++ VSWNT++       +  +A    R+    
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            +    V+ +S L AC+ L  +D G ++H  A++ +       V ++L+DMY  C +++ 
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKF 502

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            + VF+ +    +A WNA+I+GY  +    +AL +   M++     PN  T   V+  C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD-RDCKPNGLTFLGVLSGC 560


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/721 (37%), Positives = 384/721 (53%), Gaps = 69/721 (9%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            +L+A YA   R+  A + F +     RD V  N ++S+ ++      AV   R +   G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 279 -IKPDGVSIASVLPACSHLEMLDTGK--EIHAYALRNDILIDNSFVGSALVDMYCNCR-- 333
            ++PD  S  ++L A  HL  +      ++H   L++      S V +ALV +Y  C   
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALS-VCNALVALYMKCESP 210

Query: 334 --------------------------------EVECGRRVFDFISDKKIALWNAMITGYG 361
                                           +V   R VF+ +  K   +WNAMI+GY 
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270

Query: 362 QNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG- 418
            +    EA  LF +M  E V     +  T +SV+ AC     F   + +HG  I+L    
Sbjct: 271 HSGMAVEAFELFRRMVLERVP---LDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327

Query: 419 ---RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
                  V NAL+  YS+ G I +++ IFD+M ++D VSWNT+++GY        A+ + 
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVF 387

Query: 476 REMQNMEEEKNRNNVYD-----LDETVLR---------PKPNSITLMTVLPGCGALSALA 521
            EM    E      V         E  L+          KP   T    +  CG L AL 
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALK 447

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK++H + ++         G+AL+ MYA+CG +  A  +F +MP  + ++WN +I A G
Sbjct: 448 HGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALG 507

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G+E LEL   MVAEG     + P+ ++F+ +  AC+HSG+V EG   F  MK D+G
Sbjct: 508 QHGHGREALELFDRMVAEG-----IYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFG 562

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I P  DHY  ++DLLGRAG++ +A  LI  MP E      W ++L  CR   ++E+G  A
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFE-PTPSIWEAILSGCRTSGDMELGAHA 621

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A  LF + P     Y+LLSN YS+A  W  A  VRK M++ GV+KEPGCSWIE G+++H 
Sbjct: 622 ADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHV 681

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           FL GD  H ++ +++ FLE +  +MRK GYVPDT  VLH++   +KE +L  HSE+LA+ 
Sbjct: 682 FLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVG 741

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+LN PPG T+ V KNLR+C+DCH A  F+SK   REI++RDVRRFHHFK+G CSCG+Y
Sbjct: 742 FGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNY 801

Query: 882 W 882
           W
Sbjct: 802 W 802



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 222/499 (44%), Gaps = 89/499 (17%)

Query: 49  LRSEARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGK--QIHAHVVK 105
           + + AR++    A+  +  +  S  ++PD+++F A+L A   + ++S+    Q+H  V+K
Sbjct: 128 ISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLK 187

Query: 106 YGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQVSWNSMIATLCRFG---- 159
            G G  +++V N LV +Y KC S     D  KV D +  KD ++W +M+    R G    
Sbjct: 188 SGAG-GALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGA 246

Query: 160 ----------KWDL-----------------ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
                     K+D+                 A E FR M+   V    FT  SV  AC+N
Sbjct: 247 ARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306

Query: 193 LSRRDGLRLGRQVHGNSLR-----VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           +        G+ VHG  +R     V E    + NAL+  Y+K G +  A+ +F +   +D
Sbjct: 307 VGL---FAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKD 363

Query: 248 LVSWNTIVSSLSQN---DKFLE----------------------------AVMFLRQMAL 276
           +VSWNTI+S   ++   DK +E                            A+    +M  
Sbjct: 364 VVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRS 423

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             +KP   + A  + AC  L  L  GK++H + ++      NS  G+AL+ MY  C  V+
Sbjct: 424 ENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNS-AGNALITMYARCGAVK 482

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F  + +     WNAMI+  GQ+ +  EAL LF +M    G++P+  +  +V+ AC
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM-VAEGIYPDRISFLTVLTAC 541

Query: 397 VRS----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
             S    E F   E +      +  G D Y +  L+D+  R GRI  ++ +   M    T
Sbjct: 542 NHSGLVDEGFRYFESMK-RDFGIIPGEDHYTR--LIDLLGRAGRIGEARDLIKTMPFEPT 598

Query: 453 VS-WNTMITGYTICGQHGD 470
            S W  +++G   C   GD
Sbjct: 599 PSIWEAILSG---CRTSGD 614



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 40/351 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +     S    EA   +  M    +  D F F +VL A A +   + GK +H  ++
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQII 321

Query: 105 KYGYGL---SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           +        +++ V N LV  Y KCG ++    ++FD +T KD VSWN++++        
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCG-NIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380

Query: 162 DLALEAFRMMLYS-------------------------------NVEPSSFTLVSVALAC 190
           D A+E F  M Y                                NV+P  +T      AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
             L     L+ G+Q+HG+ +++G E +    NAL+ MYA+ G V +A  +F    + D V
Sbjct: 441 GELG---ALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSV 497

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWN ++S+L Q+    EA+    +M   GI PD +S  +VL AC+H  ++D G       
Sbjct: 498 SWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESM 557

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG 359
            R+  +I      + L+D+      +   R +   +  +   ++W A+++G
Sbjct: 558 KRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 8/216 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +          +A+  + +M   +++P ++ +   + A   +  L  GKQ+H H+
Sbjct: 397 SWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHI 456

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+  S+ +  N L+ MY +CG+ + + + +F  +   D VSWN+MI+ L + G    
Sbjct: 457 VQLGFEGSN-SAGNALITMYARCGA-VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGRE 514

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNA 222
           ALE F  M+   + P   + ++V  AC++    D G R    +  +   +   + +    
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY--TR 572

Query: 223 LMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVS 256
           L+ +  + GR+ +A+ L K+  FE    + W  I+S
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSI-WEAILS 607


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/776 (35%), Positives = 433/776 (55%), Gaps = 47/776 (6%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y K G ++ +  K+FD + E+  V+W  +I    +  ++  A E F  M     
Sbjct: 87  NMMISGYVKSG-NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 145

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQ---VHGNSLRVGEWNTFIM-NALMAMYAKLGR 232
           EP   T V++   C      +G  +G Q   V    +++G  +  I+ N L+  Y K  R
Sbjct: 146 EPDYVTFVTLLSGC------NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D A  LFK   + D VS+N +++  S++    +AV    +M   G+KP   + A+VL A
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
              L+ +  G++IH++ ++ +  + N FV +AL+D Y     V   R++FD + ++    
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTN-FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 318

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEG-- 407
           +N +I+GY  +   + A  LF +++  A     +P AT +S      + S     + G  
Sbjct: 319 YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS------IASNTLDWEMGRQ 372

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH   I      +  V N+L+DMY++ G+ E ++ IF ++  R  V W  MI+ Y   G 
Sbjct: 373 IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGF 432

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           + + L L  +M+                +V+    +  T  ++L    ++++L+ GK++H
Sbjct: 433 YEEGLQLFNKMRQ--------------ASVI---ADQATFASLLRASASIASLSLGKQLH 475

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           ++ I++   ++V  GSAL+D+YAKCG +  A + F  MP RN+++WN +I AY  +GE +
Sbjct: 476 SFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAE 535

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             L+  K MV  G     ++P+ V+F+ + +ACSHSG+V EG+  F  M   Y ++P  +
Sbjct: 536 ATLKSFKEMVLSG-----LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRRE 590

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HYA VVD+L R+G+  +A +L+  MP + D+   WSS+L ACRIH+N E+   AA  LF 
Sbjct: 591 HYASVVDMLCRSGRFNEAEKLMAEMPIDPDEI-MWSSVLNACRIHKNQELARRAADQLFN 649

Query: 708 LEP-DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
           +E    A+ YV +SNIY++A  W+    V K M++ GV+K P  SW+E   E H F A D
Sbjct: 650 MEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAND 709

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H Q E++   ++ L++ M + GY PDTSC LHN +E+ K   L  HSE+LAIAF +++
Sbjct: 710 RCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIS 769

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TP G+ I V KNLR C DCH A K ISKI  REI +RD  RFHHF++G CSCGD+W
Sbjct: 770 TPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 277/563 (49%), Gaps = 40/563 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   +W   +   ++ NQF+EA   +++M R   +PD   F  +L    G +  + 
Sbjct: 108 GMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQ 167

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY-KVFDRITEKDQVSWNSMIAT 154
             Q+   ++K GY  S + V NTLV+ Y  C S+  D+  ++F  + E D VS+N+MI  
Sbjct: 168 ITQVQTQIIKLGYD-SRLIVGNTLVDSY--CKSNRLDLACQLFKEMPEIDSVSYNAMITG 224

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             + G  + A+  F  M  S ++P+ FT    A+ C+N+   D + LG+Q+H   ++   
Sbjct: 225 YSKDGLDEKAVNLFVEMQNSGLKPTEFTF--AAVLCANIG-LDDIVLGQQIHSFVIKTNF 281

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            WN F+ NAL+  Y+K   V DA+ LF    ++D VS+N I+S  + + K   A    R+
Sbjct: 282 VWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRE 341

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMY 329
           +            A++L   S+    + G++IHA  +     ++IL     VG++LVDMY
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL-----VGNSLVDMY 396

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C + E    +F  ++ +    W AMI+ Y Q  + EE L LF KM + A +  +  T 
Sbjct: 397 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ-ASVIADQATF 455

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ A     +    + +H   IK G   + +  +AL+D+Y++ G I+ +   F +M  
Sbjct: 456 ASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD 515

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ VSWN MI+ Y    Q+G+A   L+  + M               +   +P+S++ + 
Sbjct: 516 RNIVSWNAMISAY---AQNGEAEATLKSFKEM--------------VLSGLQPDSVSFLG 558

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPV 567
           VL  C + S L +    H  ++  +   D      +++VDM  + G  N A ++   MP+
Sbjct: 559 VLSAC-SHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPI 617

Query: 568 R-NVITWNVIIMAYGMHGEGQEV 589
             + I W+ ++ A  +H + QE+
Sbjct: 618 DPDEIMWSSVLNACRIH-KNQEL 639



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 245/510 (48%), Gaps = 35/510 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           NT   N +++ Y K G + +A+ LF    +R  V+W  ++   SQ ++F EA     QM 
Sbjct: 82  NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR---NDILIDNSFVGSALVDMYCNC 332
             G +PD V+  ++L  C+  EM +   ++    ++   +  LI    VG+ LVD YC  
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI----VGNTLVDSYCKS 197

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             ++   ++F  + +     +NAMITGY ++  DE+A+ LF++M+  +GL P   T ++V
Sbjct: 198 NRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQN-SGLKPTEFTFAAV 256

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + A +  +     + IH   IK     + +V NAL+D YS+   +  ++ +FD+M  +D 
Sbjct: 257 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 316

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VS+N +I+GY   G+H  A  L RE+Q    ++ +                     T+L 
Sbjct: 317 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ-----------------FPFATMLS 359

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                     G++IHA  I     ++++VG++LVDMYAKCG    A  +F  +  R+ + 
Sbjct: 360 IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP 419

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W  +I AY   G  +E L+L   M     R   V  ++ TF +L  A +    +S G  L
Sbjct: 420 WTAMISAYVQKGFYEEGLQLFNKM-----RQASVIADQATFASLLRASASIASLSLGKQL 474

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +      G   +    + ++D+  + G ++DA Q    MP       +W++++ A   +
Sbjct: 475 -HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR--NIVSWNAMISAYAQN 531

Query: 693 QNVEIGEIAAQNLFL--LEPDVASHYVLLS 720
              E    + + + L  L+PD  S   +LS
Sbjct: 532 GEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 232/445 (52%), Gaps = 24/445 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  ++EM  S ++P  F F AVL A  G+ D+ LG+QIH+ V+K  + + +V V+N L
Sbjct: 233 KAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF-VWNVFVSNAL 291

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ Y K  S + D  K+FD + E+D VS+N +I+     GK   A + FR + ++  +  
Sbjct: 292 LDFYSKHDS-VIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMNALMAMYAKLGRVDDAKT 238
            F   ++    SN        +GRQ+H  ++    +    + N+L+ MYAK G+ ++A+ 
Sbjct: 351 QFPFATMLSIASNTL---DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 407

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F +   R  V W  ++S+  Q   + E +    +M    +  D  + AS+L A + +  
Sbjct: 408 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK++H++ +++  +  N F GSAL+D+Y  C  ++   + F  + D+ I  WNAMI+
Sbjct: 468 LSLGKQLHSFIIKSGFM-SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMIS 526

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI-HGHAI---- 413
            Y QN   E  L  F +M  ++GL P++ +   V+ AC  S     +EG+ H +++    
Sbjct: 527 AYAQNGEAEATLKSFKEM-VLSGLQPDSVSFLGVLSACSHSGLV--EEGLWHFNSMTQIY 583

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDAL 472
           KL   R+ Y   +++DM  R GR   ++ +  +M +  D + W++++    I      A 
Sbjct: 584 KLDPRREHYA--SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELAR 641

Query: 473 MLLREMQNMEEEK------NRNNVY 491
               ++ NMEE +      N +N+Y
Sbjct: 642 RAADQLFNMEELRDAAPYVNMSNIY 666



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 26/285 (9%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           I    +K G   D    N  +  + + G +  ++ +F+ M  ++TVS N MI+GY   G 
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 468 HGDALMLLREM------------QNMEEEKNRNNVYDLDETVLR--PKPNSITLMTVLPG 513
            G+A  L   M                +       ++L   + R   +P+ +T +T+L G
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C       +  ++    I+    + ++VG+ LVD Y K   L+ A ++F  MP  + +++
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM--VSEGMD 631
           N +I  Y   G  ++ + L   M   G     +KP E TF A+   C++ G+  +  G  
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSG-----LKPTEFTFAAVL--CANIGLDDIVLGQQ 271

Query: 632 LF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  + +K ++       +   ++D   +   V DA +L + MP +
Sbjct: 272 IHSFVIKTNFVWNVFVSN--ALLDFYSKHDSVIDARKLFDEMPEQ 314


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/831 (33%), Positives = 445/831 (53%), Gaps = 41/831 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    EA+++Y  M +  +  +  A   V+     ++D   G Q+ AHV
Sbjct: 112 SWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G  L+ V+VAN+L+ M+G     + D  ++FDR+ E+D++SWN+MI+       +  
Sbjct: 172 VVSGL-LTHVSVANSLITMFGNL-RRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSK 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
                  M +  V+P   TL S+   C++    D + LG  +H   +  G   +  ++NA
Sbjct: 230 CFIVLSDMRHGEVKPDVTTLCSLVSVCAS---SDLVALGSGIHSLCVSSGLHCSVPLINA 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-KP 281
           L+ MY+  G++D+A++LF++   RD++SWNT++SS  Q++  +EA+  L Q+       P
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + ++ +S L ACS  E L  G+ IHA  L+   L +   +G++L+ MY  C  +E   RV
Sbjct: 347 NSMTFSSALGACSSPEALMNGRTIHAMILQRS-LQNVLLIGNSLLTMYSKCNSMEDTERV 405

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----- 396
           F+ +    +   N +  GY   E    A+ +F  M    G+ PN  TM ++   C     
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT-GIKPNYITMINLQGTCKSLGD 464

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
           + S   P    +H +  + GL  D Y+ N+L+ MY+  G +E S  IF  +  +  +SWN
Sbjct: 465 LHSYGMP----LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWN 520

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            +I      G+  +A+ L  + Q+   + +R                   L   L     
Sbjct: 521 AIIAANVRHGRGEEAIKLFMDSQHAGNKLDR-----------------FCLAECLSSSAN 563

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L++L +G ++H  +++N L  D  V +A +DMY KCG ++   +       R    WN +
Sbjct: 564 LASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTL 623

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  +G  +E  +  K+MV+ G      KP+ VTF+AL +ACSH+G++ +GMD +  M
Sbjct: 624 ISGYARYGYFKEAEDTFKHMVSVGQ-----KPDYVTFVALLSACSHAGLIDKGMDYYNSM 678

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              +G+ P   H  C+VDLLGR GK  +A + I+ MP        W SLL + R H+N++
Sbjct: 679 APTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV-LPNDLIWRSLLSSSRTHKNLD 737

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           IG  AA+NL  L+P   S YVLLSN+Y++   W     +R  MK + + K P CSW++  
Sbjct: 738 IGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK 797

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           +E+  F  GD SH  +E+++  L+ +  ++R+ GYV DTS  LH+ +EE+KE  L  HSE
Sbjct: 798 NEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSE 857

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           KLA+A+G+L  P G+TIR+ KNLRVC DCH   K +S +  REI+LRD  R
Sbjct: 858 KLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 250/522 (47%), Gaps = 31/522 (5%)

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SW + ++   R G    A    R+M   +V  S F L S+  AC +   ++G   G  +H
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 207 GNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             + R G   N +I  AL+ +Y   G V +A+ LF     R++VSW  I+ +LS N    
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA++  R+M   G+  +  ++A+V+  C  LE    G ++ A+ + + +L   S V ++L
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS-VANSL 186

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           + M+ N R V+   R+FD + ++    WNAMI+ Y   E   +  ++   M     + P+
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH-GEVKPD 245

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            TT+ S+V  C  S+      GIH   +  GL     + NAL++MYS  G+++ ++++F 
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           +M  RD +SWNTMI+ Y       +AL  L ++   +E                  PNS+
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDE----------------GPPNSM 349

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  + L  C +  AL  G+ IHA  ++  L   +++G++L+ MY+KC  +    RVF+ M
Sbjct: 350 TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM 409

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG- 624
           P  +V++ NV+   Y    +    + +   M     RG  +KPN +T I L   C   G 
Sbjct: 410 PCYDVVSCNVLTGGYAALEDVANAMRVFSWM-----RGTGIKPNYITMINLQGTCKSLGD 464

Query: 625 MVSEGMDLFYK------MKDDYGIEPSPDHYACVVDLLGRAG 660
           + S GM L         + D+Y        YA   DL    G
Sbjct: 465 LHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 178/708 (25%), Positives = 325/708 (45%), Gaps = 41/708 (5%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA--GIQD-LSLG 96
           R   SW  ++   AR      A      M   D+    FA  +++ A    G Q+  + G
Sbjct: 4   RTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACG 63

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
             IHA   + G  + +V +   L+++YG  G  + +  ++F  + +++ VSW +++  L 
Sbjct: 64  AAIHALTHRAGL-MGNVYIGTALLHLYGSRGLVL-NAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR-DGLRLGRQVHGNSLRVGEW 215
             G  + AL A+R M    V  ++  L +V   C  L     GL++   V  + L     
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLT--- 178

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  + N+L+ M+  L RV DA+ LF   E+RD +SWN ++S  S  + + +  + L  M 
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              +KPD  ++ S++  C+  +++  G  IH+  + + +      + +ALV+MY    ++
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI-NALVNMYSTAGKL 297

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +    +F  +S + +  WN MI+ Y Q+    EAL    ++ +     PN+ T SS + A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C   EA  +   IH   ++  L     + N+L+ MYS+   +E ++ +F+ M   D VS 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N +  GY       +A+ +   M+                     KPN IT++ +   C 
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTG-----------------IKPNYITMINLQGTCK 460

Query: 516 ALSAL-AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
           +L  L + G  +HAY  +  L +D  + ++L+ MYA CG L  +  +F  +  ++VI+WN
Sbjct: 461 SLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWN 520

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II A   HG G+E ++L  +    G+     K +        ++ ++   + EGM L +
Sbjct: 521 AIIAANVRHGRGEEAIKLFMDSQHAGN-----KLDRFCLAECLSSSANLASLEEGMQL-H 574

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQ 693
            +    G++         +D+ G+ GK++    ++  +P P       W++L+     + 
Sbjct: 575 GLSVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRPTQCWNTLISGYARYG 631

Query: 694 NVEIGEIAAQNLFLL--EPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             +  E   +++  +  +PD  +   LLS   S A L DK MD    M
Sbjct: 632 YFKEAEDTFKHMVSVGQKPDYVTFVALLSAC-SHAGLIDKGMDYYNSM 678



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 257/551 (46%), Gaps = 29/551 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + SW   +   +    + +  +   +M   +++PD     +++   A    ++LG 
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IH+  V  G    SV + N LVNMY   G  + +   +F  ++ +D +SWN+MI++  +
Sbjct: 267 GIHSLCVSSGLH-CSVPLINALVNMYSTAG-KLDEAESLFRNMSRRDVISWNTMISSYVQ 324

Query: 158 FGKWDLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
                 ALE    +L ++   P+S T  S   ACS+    + L  GR +H   L+    N
Sbjct: 325 SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS---PEALMNGRTIHAMILQRSLQN 381

Query: 217 TFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             ++ N+L+ MY+K   ++D + +F+S    D+VS N +    +  +    A+     M 
Sbjct: 382 VLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMR 441

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             GIKP+ +++ ++   C  L  L + G  +HAY  +  +L D  ++ ++L+ MY  C +
Sbjct: 442 GTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDE-YITNSLITMYATCGD 500

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E    +F  I++K +  WNA+I    ++   EEA+ LF+  +  AG   +   ++  + 
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH-AGNKLDRFCLAECLS 559

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +     +  +   +HG ++K GL  D +V NA MDMY + G+++       D   R T  
Sbjct: 560 SSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQC 619

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WNT+I+GY   G   +A    + M ++ +                 KP+ +T + +L  C
Sbjct: 620 WNTLISGYARYGYFKEAEDTFKHMVSVGQ-----------------KPDYVTFVALLSAC 662

Query: 515 GALSALAKGKEIH-AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVIT 572
                + KG + + + A    ++  +     +VD+  + G    A +  D MPV  N + 
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 573 WNVIIMAYGMH 583
           W  ++ +   H
Sbjct: 723 WRSLLSSSRTH 733



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 22/158 (13%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-I 505
           M  R + SW T ++G   CG    A  LLR M+                   R  P S  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRE------------------RDVPLSGF 42

Query: 506 TLMTVLPGC---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            L +++  C   G     A G  IHA   R  L  +V +G+AL+ +Y   G +  A+R+F
Sbjct: 43  ALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLF 102

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             MP RNV++W  I++A   +G  +E L   + M  EG
Sbjct: 103 WEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG 140


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/776 (34%), Positives = 430/776 (55%), Gaps = 37/776 (4%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   NT++  Y K G ++     +FD + ++  V+W  +I    +  ++  A   F  M
Sbjct: 72  NVISTNTMIMGYLKSG-NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKL 230
               + P   TL ++    S  +  + +    QVHG+ ++VG  +T ++ N+L+  Y K 
Sbjct: 131 CRHGMVPDHITLATL---LSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKT 187

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
             +  A  LFK   ++D V++N +++  S+     +A+    +M   G +P   + A+VL
Sbjct: 188 RSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVL 247

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            A   ++ ++ G+++H++ ++ +  + N FV +AL+D Y     +   R++F  + +   
Sbjct: 248 TAGIQMDDIEFGQQVHSFVVKCN-FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDG 306

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEG 407
             +N +IT    N   EE+L LF +++        +P AT +S        S        
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLS----IAANSLNLEMGRQ 362

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH  AI      +  V N+L+DMY++  +   +  IF D+  + +V W  +I+GY   G 
Sbjct: 363 IHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGL 422

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           H D L L  EM                    +   +S T  ++L  C  L++L  GK++H
Sbjct: 423 HEDGLKLFVEMHRA-----------------KIGADSATYASILRACANLASLTLGKQLH 465

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           +  IR+   ++V  GSALVDMYAKCG +  A ++F  MPVRN ++WN +I AY  +G+G 
Sbjct: 466 SRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGG 525

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             L   + M+  G     ++PN V+F+++  ACSH G+V EG+  F  M   Y +EP  +
Sbjct: 526 HALRSFEQMIHSG-----LQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRRE 580

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HYA +VD+L R+G+ ++A +L+  MP E D+   WSS+L +CRIH+N E+   AA  LF 
Sbjct: 581 HYASMVDMLCRSGRFDEAEKLMARMPFEPDEI-MWSSILNSCRIHKNQELAIKAADQLFN 639

Query: 708 LEP-DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
           ++    A+ YV +SNIY++A  WD    V+K ++E G+RK P  SW+E   + H F A D
Sbjct: 640 MKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAND 699

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH Q++++   L+ L ++M ++GY PD++C LHNV+EE K   L  HSE++AIAF +++
Sbjct: 700 TSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALIS 759

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TP G+ I V KNLR CNDCH A K ISKI +REI +RD  RFHHF +G+CSC DYW
Sbjct: 760 TPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 270/549 (49%), Gaps = 28/549 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+ N+F EA   + +M R  + PD+     +L      + ++   Q+H HV
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK GY  S++ V N+L++ Y K  S +     +F  + EKD V++N+++    + G    
Sbjct: 166 VKVGYD-STLMVCNSLLDSYCKTRS-LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHD 223

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M      PS FT  +V  A   +   D +  G+QVH   ++    WN F+ NA
Sbjct: 224 AINLFFKMQDLGFRPSEFTFAAVLTAGIQM---DDIEFGQQVHSFVVKCNFVWNVFVANA 280

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+  Y+K  R+ +A+ LF    + D +S+N +++  + N +  E++   R++        
Sbjct: 281 LLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRR 340

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
               A++L   ++   L+ G++IH+ A+  D  I    VG++LVDMY  C +     R+F
Sbjct: 341 QFPFATLLSIAANSLNLEMGRQIHSQAIVTDA-ISEVLVGNSLVDMYAKCDKFGEANRIF 399

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             ++ +    W A+I+GY Q    E+ L LF++M   A +  ++ T +S++ AC    + 
Sbjct: 400 ADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHR-AKIGADSATYASILRACANLASL 458

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +H   I+ G   + +  +AL+DMY++ G I+ +  +F +M VR++VSWN +I+ Y
Sbjct: 459 TLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAY 518

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               Q+GD    LR  + M                   +PNS++ +++L  C     + +
Sbjct: 519 ---AQNGDGGHALRSFEQMIHSG--------------LQPNSVSFLSILCACSHCGLVEE 561

Query: 523 G-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G +  ++      L       +++VDM  + G  + A ++   MP   + I W+ I+ + 
Sbjct: 562 GLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSC 621

Query: 581 GMHGEGQEV 589
            +H + QE+
Sbjct: 622 RIH-KNQEL 629



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 61/337 (18%)

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK G   +    N  +  + + G +  ++ +FD+M  ++ +S NTMI GY   G    A 
Sbjct: 34  IKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTAR 93

Query: 473 MLLREMQNME-----------EEKNRN-NVYDLDETVLRPK--PNSITLMTVLPGCGALS 518
            L   M                + NR    ++L   + R    P+ ITL T+L G     
Sbjct: 94  SLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFE 153

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           ++ +  ++H + ++    + ++V ++L+D Y K   L  A  +F  M  ++ +T+N ++ 
Sbjct: 154 SVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLT 213

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL-----------FAACSHSGMVS 627
            Y   G   + + L   M   G R     P+E TF A+           F    HS +V 
Sbjct: 214 GYSKEGFNHDAINLFFKMQDLGFR-----PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268

Query: 628 ------------------------EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
                                   E   LFY+M +  GI      Y  ++      G+VE
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGIS-----YNVLITCCAWNGRVE 323

Query: 664 DAYQLINMMP-PEFDKAG-AWSSLLGACRIHQNVEIG 698
           ++ +L   +    FD+    +++LL       N+E+G
Sbjct: 324 ESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMG 360


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 286/856 (33%), Positives = 439/856 (51%), Gaps = 84/856 (9%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
             ++L++     DL  G+ +HA +V  G   +S  +AN L+ MY  C +D+    ++F  
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHC-ADLASALRLFAA 81

Query: 140 ITEKDQVSWNSMIATL-------------------------------------------- 155
           +  ++ VSW ++++ L                                            
Sbjct: 82  MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAA 141

Query: 156 --CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
             C  G   L ++ +   L+    P++ T V +A    +  R   LR GR +H   +  G
Sbjct: 142 SHCHSGP-TLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200

Query: 214 EW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
               +TF+ N L+ MY+    +  A  LF +   R+ VSW T+VS LSQN    +A+   
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAF 260

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYC 330
             M   G+ P   +++S   A + L      +   A A    +  D   FV S L DMY 
Sbjct: 261 AAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA---SVGFDTELFVASNLADMYS 317

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +    RVFD +  K    W AMI GY +N   E A++ F  M+    +  +     
Sbjct: 318 KCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFC 377

Query: 391 SVVPACVRSEAFPD---KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE-ISKTIFDD 446
           SV+ A   S    D    + IH    K G   +  V+NAL+DMY++   +E  S+ +  D
Sbjct: 378 SVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKID 434

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
               + VS  +MI GY       +AL++  E++    E                 PN  T
Sbjct: 435 PGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE-----------------PNEFT 477

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             +++ GC   + L +G ++HA  I+  L  D  VGS LVDMY KCG ++ + ++F+ + 
Sbjct: 478 FSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIE 537

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R  I WN +I  +  HG G+E ++    M+  G     ++PN + F++L  ACSH+G+V
Sbjct: 538 YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG-----IRPNHIAFVSLLTACSHAGLV 592

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            EG+  FY MK+ +GIEP  +HY+C++D  GRAG++++AY+ I+ MP + +  G W SLL
Sbjct: 593 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG-WCSLL 651

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
           GACR+  + E+GE+AAQNL  LEP     +V LS IY+S   W+    VRK M++  ++K
Sbjct: 652 GACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKK 711

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
            PG SW++   + H F + D SH Q + ++  LE L+ R+++EGY+PDTS +  N+ +  
Sbjct: 712 LPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIA 771

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           KE +L  HSE++A+AF +++ P    I V KNLR+C DCH A KFI K+E R+II+RD  
Sbjct: 772 KERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNS 831

Query: 867 RFHHFKNGTCSCGDYW 882
           RFHHF NG CSCGDYW
Sbjct: 832 RFHHFVNGRCSCGDYW 847



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 234/566 (41%), Gaps = 77/566 (13%)

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAK 229
           L+    P++ T V +A    +  R   LR GR +H   +  G    +TF+ N L+ MY+ 
Sbjct: 9   LWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 68

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP-------- 281
              +  A  LF +   R+ VSW T+VS LSQN    +A+     M   G+ P        
Sbjct: 69  CADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETK 128

Query: 282 ----------------------------------------DGVSIASVLPACSHLEMLDT 301
                                                     V +AS+L +C     L  
Sbjct: 129 FHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRR 188

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+ +HA  + +     ++F+ + L+ MY +C ++    R+F  +  +    W  +++G  
Sbjct: 189 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 248

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QN    +AL  F  M   AG+ P    +SS   A     A          A  +G   + 
Sbjct: 249 QNLMHADALAAFAAMRR-AGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTEL 306

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +V + L DMYS+ G +  +  +FD M  +D V+W  MI GY   G    A++  R+M+  
Sbjct: 307 FVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK-- 364

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                R  +   D+ V           +VL   G L      K IH    +     +V V
Sbjct: 365 -----REGLVGADQHV---------FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 410

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            +AL+DMYAK   +  A RV  + P   NV++   +I  Y      +E L +   +  +G
Sbjct: 411 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 470

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                V+PNE TF ++   C+   ++ +G  L  ++     I  S    + +VD+ G+ G
Sbjct: 471 -----VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG-STLVDMYGKCG 524

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLL 686
            +  + QL N +  E+    AW++++
Sbjct: 525 LISLSMQLFNEI--EYRTDIAWNAVI 548



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 51/297 (17%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA++ Y+E+ R  ++P+ F F +++K  A    L  G Q+HA V+K      S  V +TL
Sbjct: 458 EALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF-VGSTL 516

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+MYGKCG     + ++F+ I  +  ++WN++I    + G    A++AF  M+YS + P+
Sbjct: 517 VDMYGKCGLISLSM-QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 575

Query: 180 SFTLVSVALACSNLSRRD-GLRLG---RQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
               VS+  ACS+    D GL+     ++ HG   +   ++  I       Y + GR+D 
Sbjct: 576 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCII-----DTYGRAGRLD- 629

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
                                         EA  F+ +M    IKP+     S+L AC  
Sbjct: 630 ------------------------------EAYKFISEMP---IKPNAYGWCSLLGACR- 655

Query: 296 LEMLDTGKEIHAYALRNDILID--NSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
              +   KE+   A +N + ++  N+ +  +L  +Y +  + E  + V   + D +I
Sbjct: 656 ---MRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 709


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 296/840 (35%), Positives = 447/840 (53%), Gaps = 64/840 (7%)

Query: 70  RSDIQPDNFAFPAVLKAVAG--------IQDLSLGKQIHAHVVKYGYGLS-SVTVANTLV 120
           R++ +P+     AVL A+A          +  S+ +    H    G  L   + VA  L+
Sbjct: 118 RAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALL 177

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI-ATLCRFGKWDLALEAFRMMLYSNVEPS 179
           + YGKCG  +    +VF RI   D + WN+ I A      + D AL   R M    + P+
Sbjct: 178 DAYGKCGC-VESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPN 236

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
             + V++  +C + S    L L R +H     +G   +  +  AL+ MY + G VD++  
Sbjct: 237 RASFVAILSSCGDHS---SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIA 293

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F++   R+ VSWN ++++ +Q      A     +M   G +P+ ++  + L A      
Sbjct: 294 VFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSS 353

Query: 299 LDTGKE--IHAY----ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            D G+   +H +     L  D++     VG+ALV MY +   ++  R  FD I  K I  
Sbjct: 354 QDLGESAALHGWIACAGLEGDVM-----VGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 408

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WNAM+T YG N    EA+ LF  M+    L PN  +  +V+  C   E   +   IH   
Sbjct: 409 WNAMLTAYGDNGRAREAMELFAAMKR-QSLAPNKVSYLAVLGCC---EDVSEARSIHAEV 464

Query: 413 IKLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           +  GL  ++  + N ++ M++R G +E +   FD   V+D+VSWNT +   +      D 
Sbjct: 465 VGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALS---AREDL 521

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH---A 528
              +     M+ E  R              P+  TL++V+  C  L  L  G+ I    +
Sbjct: 522 HGAITAFYTMQHEGFR--------------PDKFTLVSVVDVCADLGTLELGRSIQQQLS 567

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGC-LNFARRVFDLMP--VRNVITWNVIIMAYGMHGE 585
            AI   +  DVVV SA+++M AKCG  ++   R+F  MP   ++++ WN +I AY  HG 
Sbjct: 568 AAIE--VERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 625

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G++ L+L + M    S    V+P+  TF+++ + CSH+G+V +G+  F+  ++  GIE  
Sbjct: 626 GRKALKLFRIMQQRSS----VRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQ 681

Query: 646 P-DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
           P +HYAC+VD+LGR G + +A   I  MP   D    W+SLLGAC  + ++E GE AA+ 
Sbjct: 682 PVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSV-VWTSLLGACSSYGDLEGGERAARA 740

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE-PGCSWIEFGDEIHKFL 763
              L    +  YV+LSNIY++A  W+ ++ VR+ M E  V+K  PG S I   + +H+F 
Sbjct: 741 FIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFF 800

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           A D SH QS+ ++  LE L   +R+ GYVPDT  VLH+V EE+KE LL  HSEKLAIAFG
Sbjct: 801 ARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFG 860

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF-KNGTCSCGDYW 882
           +++ P   +IRV KNLRVC DCH ATKFI+++  REI +RD  RFHHF K+G CSCGDYW
Sbjct: 861 LISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 164/632 (25%), Positives = 286/632 (45%), Gaps = 54/632 (8%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
              +L+   G  DL+ G+Q+H  +VK G   + + + N LV MY KC S + D    F  
Sbjct: 27  LAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDL-LGNYLVQMYSKCRS-LDDANAAFSA 84

Query: 140 ITEKDQVSWNSMIATLCRFGK-WDLALEAFRMMLYSNVE--PSSFTLVSVALACSN---- 192
           +  +   +WN++IA        +DL     RM L    E  P+  T+++V  A ++    
Sbjct: 85  LRSRGIATWNTLIAAQSSPAAVFDLYT---RMKLEERAENRPNKLTIIAVLGAIASGDPS 141

Query: 193 ---LSRRDGLRLGRQVH----GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
               SR   +   R VH    G+ L   E + F+  AL+  Y K G V+ A  +F   + 
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDL---ERDLFVATALLDAYGKCGCVESALEVFSRIQV 198

Query: 246 RDLVSWNTIVSSLSQNDKFLE-AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            DL+ WN  + + + ND+  + A++ +R+M L G+ P+  S  ++L +C     L   + 
Sbjct: 199 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 258

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHA       L D   V +ALV MY  C  V+    VF+ ++ +    WNAMI  + Q  
Sbjct: 259 IHARVEELGFLGD-VVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 317

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA--FPDKEGIHGHAIKLGLGRDRY 422
           +   A  ++ +M++  G  PN  T  + + A   S +    +   +HG     GL  D  
Sbjct: 318 HRSAAFAIYWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVM 376

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V  AL+ MY   G I+ ++  FD +  ++ VSWN M+T Y   G+  +A+ L   M+   
Sbjct: 377 VGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQS 436

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVV 541
                              PN ++ + VL  C  +S   + + IHA  + N + A +  +
Sbjct: 437 -----------------LAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSI 476

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            + +V M+A+ G L  A   FD   V++ ++WN  + A     +    +     M  EG 
Sbjct: 477 ANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGF 536

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG- 660
           R     P++ T +++   C+  G +  G  +  ++     +E      + V++++ + G 
Sbjct: 537 R-----PDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGS 591

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            V++  +L   MP +     AW++++ A   H
Sbjct: 592 SVDECERLFARMPDDRKDLVAWNTMIAAYAQH 623



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 240/535 (44%), Gaps = 35/535 (6%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+L    M    + P+  +F A+L +      L L + IHA V + G+ L  V VA  LV
Sbjct: 221 ALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGF-LGDVVVATALV 279

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            MYG+CGS + +   VF+ +  ++ VSWN+MIA   + G    A   +  M      P+ 
Sbjct: 280 TMYGRCGS-VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNK 338

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            T V+   A  + S +D L     +HG     G E +  +  AL+ MY   G +D A+  
Sbjct: 339 ITFVTALKAACSSSSQD-LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAA 397

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F +   +++VSWN ++++   N +  EA+     M  + + P+ VS  +VL  C   E +
Sbjct: 398 FDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDV 454

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              + IHA  + N +    S + + +V M+     +E     FD    K    WN  +  
Sbjct: 455 SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAA 514

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH-AIKLGLG 418
               E    A+  F  M+   G  P+  T+ SVV  C           I    +  + + 
Sbjct: 515 LSAREDLHGAITAFYTMQH-EGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 573

Query: 419 RDRYVQNALMDMYSRMG-RIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLL 475
           RD  V +A+M+M ++ G  ++  + +F  M  + +D V+WNTMI  Y   G    AL L 
Sbjct: 574 RDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 633

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNM 534
           R MQ       R++V          +P+S T ++VL GC     +  G  IH + + R +
Sbjct: 634 RIMQ------QRSSV----------RPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREV 675

Query: 535 LATD---VVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGE 585
           L  +   V   + LVD+  + G L  A      MP+  + + W  ++ A   +G+
Sbjct: 676 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGD 730



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 208/442 (47%), Gaps = 31/442 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHA 101
           SW   + + A+      A   Y  M +   +P+   F   LKA   +  QDL     +H 
Sbjct: 305 SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHG 364

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            +   G     V V   LV MYG  G+ +      FD I  K+ VSWN+M+      G+ 
Sbjct: 365 WIACAGLE-GDVMVGTALVTMYGSTGA-IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRA 422

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
             A+E F  M   ++ P+  + ++V   C ++S  +   +  +V GN L   E  + I N
Sbjct: 423 REAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS--EARSIHAEVVGNGLFAQE--SSIAN 478

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ M+A+ G +++A   F +   +D VSWNT V++LS  +    A+     M   G +P
Sbjct: 479 GVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRP 538

Query: 282 DGVSIASVLPACSHLEMLDTGKEIH-----AYALRNDILIDNSFVGSALVDMYCNC-REV 335
           D  ++ SV+  C+ L  L+ G+ I      A  +  D++     V SA+++M   C   V
Sbjct: 539 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVV-----VASAVMNMVAKCGSSV 593

Query: 336 ECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           +   R+F  + D  K +  WN MI  Y Q+ +  +AL LF  M++ + + P+++T  SV+
Sbjct: 594 DECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVL 653

Query: 394 PACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNA-LMDMYSRMGRIEISKTIFDDMEV 449
             C  S A   ++GIH   +    LG+ +      A L+D+  RMG +  ++     M +
Sbjct: 654 SGC--SHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPL 711

Query: 450 -RDTVSWNTMITGYTICGQHGD 470
             D+V W +++     C  +GD
Sbjct: 712 PADSVVWTSLLGA---CSSYGD 730



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 28/349 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L +   + + REA+  +  M R  + P+  ++ AVL      +D+S  + IHA V
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEV 464

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G      ++AN +V M+ + GS + +    FD    KD VSWN+ +A L        
Sbjct: 465 VGNGLFAQESSIANGVVRMFARSGS-LEEAVAAFDATVVKDSVSWNTKVAALSAREDLHG 523

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN---SLRVGEWNTFIM 220
           A+ AF  M +    P  FTLVSV   C++L     L LGR +      ++ V E +  + 
Sbjct: 524 AITAFYTMQHEGFRPDKFTLVSVVDVCADLGT---LELGRSIQQQLSAAIEV-ERDVVVA 579

Query: 221 NALMAMYAKLG-RVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           +A+M M AK G  VD+ + LF    D  +DLV+WNT++++ +Q+    +A+   R M  R
Sbjct: 580 SAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR 639

Query: 278 -GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL-IDNSFVG--SALVDMYCN-- 331
             ++PD  +  SVL  CSH  +++ G  IH + L  ++L I+   V   + LVD+     
Sbjct: 640 SSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEHYACLVDVLGRMG 697

Query: 332 -CREVECGRRVFDFISDKKIALWNAMI---TGYGQNEYDEEALMLFIKM 376
             RE E   R     +D  +  W +++   + YG  E  E A   FI++
Sbjct: 698 YLREAEDFIRKMPLPADSVV--WTSLLGACSSYGDLEGGERAARAFIEL 744



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 40/299 (13%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T++ ++  C+          +H   +K GL R+  + N L+ MYS+   ++ +   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             R   +WNT+I   +      D   L   M+  E  +NR              PN +T+
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFD---LYTRMKLEERAENR--------------PNKLTI 128

Query: 508 MTVLPGCGALS-------------ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           + VL   GA++             ++A+ + +H     + L  D+ V +AL+D Y KCGC
Sbjct: 129 IAVL---GAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGC 185

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE-VLELLKNMVAEGSRGGEVKPNEVTF 613
           +  A  VF  + V ++I WN  IMA   + E  +  L L++ M  EG     + PN  +F
Sbjct: 186 VESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEG-----LLPNRASF 240

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +A+ ++C     +     +  ++ ++ G          +V + GR G V+++  +   M
Sbjct: 241 VAILSSCGDHSSLPLARSIHARV-EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAM 298


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/575 (42%), Positives = 340/575 (59%), Gaps = 63/575 (10%)

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F    +  +  W A+I G+      E+AL  + +M    G+ PNA T SS++  C    
Sbjct: 31  LFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQML-TQGVEPNAFTFSSILKLC---- 85

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR--------------------------- 433
                + +H  A+KLG   D YV+  L+D+Y+R                           
Sbjct: 86  PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 145

Query: 434 ----MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
                G ++ ++ +FD ME RD V WN MI GYT  G   +AL+L R M           
Sbjct: 146 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA-------- 197

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                    + KPN +T+++VL  CG L AL  G+ +H+Y   N +  +V VG+ALVDMY
Sbjct: 198 ---------KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY 248

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +KCG L  AR VFD +  ++V+ WN +I+ Y M G  QE L+L K+M   G     + P 
Sbjct: 249 SKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMG-----LHPT 303

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            +TFI + +AC HSG V+EG D+F KMKD+YGIEP  +HY C+V+LLGRAG VE AY+L+
Sbjct: 304 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELV 363

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH--YVLLSNIYSSAQ 727
             M  E D    W +LLGACR+H  + +GE   +   L++ ++A+   Y+LLSNIY++  
Sbjct: 364 KNMNIEPDPV-LWGTLLGACRLHGKIALGEKIVE--LLVDQNLANSGTYILLSNIYAAVG 420

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            WD    +R  MK+ GV+KEPGCS IE  +++H+FLAG  +H + ++++  LE ++  ++
Sbjct: 421 NWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 480

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
             GY P T  VLH++ E EKE  L  HSEKLAIAFG++NT PGTTI++ KNLRVC DCH+
Sbjct: 481 SHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHE 540

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TK ISKI  R+I++RD  RFHHF NG+CSCGDYW
Sbjct: 541 VTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 171/362 (47%), Gaps = 34/362 (9%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC----- 190
           +F R        W ++I      G  + AL  +  ML   VEP++FT  S+   C     
Sbjct: 31  LFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPG 90

Query: 191 -------------SNLSRRDGL-----RLGRQVHGNSL--RVGEWNTFIMNALMAMYAKL 230
                        S+L  R GL     R G  V    L   + E +   + A++  YAK 
Sbjct: 91  KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 150

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +D A+ LF   E+RD V WN ++   +QN    EA++  R+M     KP+ V++ SVL
Sbjct: 151 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 210

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            AC  L  L++G+ +H+Y   N I   N  VG+ALVDMY  C  +E  R VFD I DK +
Sbjct: 211 SACGQLGALESGRWVHSYIENNGIQF-NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 269

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WN+MI GY    + +EAL LF  M  + GL P   T   ++ AC  S    +   I  
Sbjct: 270 VAWNSMIVGYAMXGFSQEALQLFKSMCRM-GLHPTNITFIGILSACGHSGWVTEGWDIF- 327

Query: 411 HAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
           + +K   G +  +++   ++++  R G +E +  +  +M +  D V W T++     C  
Sbjct: 328 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA---CRL 384

Query: 468 HG 469
           HG
Sbjct: 385 HG 386



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 194/423 (45%), Gaps = 67/423 (15%)

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           ++ L   YA LGR+D +  LF   ++  +  W  I+   +      +A+ F  QM  +G+
Sbjct: 12  LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALR---------------------------- 311
           +P+  + +S+L  C     ++ GK +H+ A++                            
Sbjct: 72  EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127

Query: 312 -NDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
             D + + S V  +A++  Y    E++  R +FD + ++    WN MI GY QN    EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L+LF +M + A   PN  T+ SV+ AC +  A      +H +    G+  + +V  AL+D
Sbjct: 188 LVLFRRMLK-AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 246

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MYS+ G +E ++ +FD ++ +D V+WN+MI GY + G   +AL L + M  M        
Sbjct: 247 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLH----- 301

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-----AYAIRNMLATDVVVGSA 544
                       P +IT + +L  CG    + +G +I       Y I   +         
Sbjct: 302 ------------PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY----GC 345

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELL--KNMVA 598
           +V++  + G +  A  +   M +  + + W  ++ A  +HG+   G++++ELL  +N+  
Sbjct: 346 MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLAN 405

Query: 599 EGS 601
            G+
Sbjct: 406 SGT 408



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 41/293 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A      +A+  Y +M    ++P+ F F ++LK    +  +  GK +H+  V
Sbjct: 43  WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAV 98

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK--------------------- 143
           K G+  S + V   L+++Y + G D+    ++FD + EK                     
Sbjct: 99  KLGFD-SDLYVRTGLLDVYAR-GGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAA 156

Query: 144 ----------DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                     D V WN MI    + G  + AL  FR ML +  +P+  T++SV  AC  L
Sbjct: 157 RVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQL 216

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                L  GR VH      G ++N  +  AL+ MY+K G ++DA+ +F   +D+D+V+WN
Sbjct: 217 G---ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWN 273

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +++   +      EA+   + M   G+ P  ++   +L AC H   +  G +I
Sbjct: 274 SMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 326



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 60/293 (20%)

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           + L   Y+ +GR++ S  +F   +      W  +I G+ + G H  AL    +M     E
Sbjct: 13  DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                            PN+ T  ++L  C     +  GK +H+ A++    +D+ V + 
Sbjct: 73  -----------------PNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTG 111

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVIT-------------------------------W 573
           L+D+YA+ G +  A+++FD MP +++++                               W
Sbjct: 112 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 171

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           NV+I  Y  +G   E L L + M+       + KPNEVT +++ +AC   G +  G  + 
Sbjct: 172 NVMIDGYTQNGMPNEALVLFRRMLK-----AKAKPNEVTVLSVLSACGQLGALESGRWVH 226

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             ++++ GI+ +      +VD+  + G +EDA  + + +  +     AW+S++
Sbjct: 227 SYIENN-GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK--DVVAWNSMI 276



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 17/274 (6%)

Query: 1   MASSAQCLTLLPSPPLSSLQT-----HQPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           + S+ Q    +P   L SL        +     A  +   G + R    W   +    ++
Sbjct: 122 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 181

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
               EA++ +  M ++  +P+     +VL A   +  L  G+ +H+++   G   + V V
Sbjct: 182 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN-VHV 240

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              LV+MY KCGS + D   VFD+I +KD V+WNSMI      G    AL+ F+ M    
Sbjct: 241 GTALVDMYSKCGS-LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMG 299

Query: 176 VEPSSFTLVSVALACSN----LSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG 231
           + P++ T + +  AC +        D     +  +G   ++  +       ++ +  + G
Sbjct: 300 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY-----GCMVNLLGRAG 354

Query: 232 RVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKF 264
            V+ A  L K+   + D V W T++ +   + K 
Sbjct: 355 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 388


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 291/861 (33%), Positives = 437/861 (50%), Gaps = 133/861 (15%)

Query: 55  SNQFRE-----AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           SN+FR+      + S    T ++ +P     P    ++A            A +VK+   
Sbjct: 6   SNRFRQLHSRSCLRSLQTTTTANRKPSTRNQPKTTSSLA----------TDADIVKW--- 52

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             ++ + N + N  G+C S +    ++F+ +  +  +SWN+MI+      K+ LA + F 
Sbjct: 53  --NIAITNHMRN--GQCDSAL----RLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN--SLRVGEWNTFI-------- 219
            M      P+   LVS  +  S   R   LR  R +        V  WN  +        
Sbjct: 105 KM------PTR-DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157

Query: 220 ------------------MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
                              N ++A Y + GR++DA+ LF+S  D +L+SWN ++    + 
Sbjct: 158 VKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKR 217

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           ++ ++A     +M  R    D VS  +++   +       G+ + A  L  +  + + F 
Sbjct: 218 NRLVDARGIFDRMPER----DEVSWNTMISGYAQ-----NGELLEAQRLFEESPVRDVFT 268

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            +A+V  Y     ++  RRVFD + +K    WNA+I GY Q +  ++A  LF        
Sbjct: 269 WTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF-------- 320

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
                             EA P               ++    N ++  Y++ G I  ++
Sbjct: 321 ------------------EAMP--------------CQNVSSWNTMITGYAQNGDIAQAR 348

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
             FD M  RD++SW  +I GY   G   +AL L  EM+   E  NR+             
Sbjct: 349 NFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS------------- 395

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               T  + L  C  ++AL  GK++H   ++  L +   VG+AL+ MY KCG ++ A  V
Sbjct: 396 ----TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+ +  + V++WN +I  Y  HG G+E L L ++M   G     + P++VT + + +ACS
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG-----ILPDDVTMVGVLSACS 506

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G+V +G + FY M  DYGI  +  HY C++DLLGRAG+++DA  L+  MP E D A  
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD-AAT 565

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLGA RIH N E+GE AA+ +F +EPD +  YVLLSN+Y+++  W     +R +M++
Sbjct: 566 WGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRD 625

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            GV+K PG SW+E  ++IH F  GD  H + ++++ FLE L  +M+KEGYV  T  VLH+
Sbjct: 626 RGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHD 685

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           V EEEK  +L  HSEKLA+AFGIL  P G  IRV KNLRVC DCH A K ISKI  R II
Sbjct: 686 VEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLII 745

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           LRD  RFHHF  G CSCGDYW
Sbjct: 746 LRDSHRFHHFNGGQCSCGDYW 766



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 6/216 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S    EA+  ++EM R   + +   F + L   A I  L LGKQ+H  V
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S   V N L+ MY KCG ++ D Y VF+ I EK+ VSWN+MIA   R G    
Sbjct: 421 VKAGLE-SGCYVGNALLVMYCKCG-NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKE 478

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M  + + P   T+V V  ACS+    D  +     +  +   G   N+     
Sbjct: 479 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD--KGTEYFYSMTQDYGITANSKHYTC 536

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           ++ +  + GR+DDA+ L K+   + D  +W  ++ +
Sbjct: 537 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 572


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/749 (36%), Positives = 424/749 (56%), Gaps = 35/749 (4%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +FPA+LKA A ++D+  G ++H+ +VK GY  S+  + N LV+MY K   D+    ++FD
Sbjct: 147 SFPALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAK-NDDLSAARRLFD 204

Query: 139 RITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
              EK D V WNS++++    GK    LE FR M  +   P+S+T+VS   AC   S   
Sbjct: 205 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY-- 262

Query: 198 GLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             +LG+++H + L+    ++  ++ NAL+AMY + G++  A+ + +   + D+V+WN+++
Sbjct: 263 -AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 321

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
               QN  + EA+ F   M   G K D VS+ S++ A   L  L  G E+HAY +++   
Sbjct: 322 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-W 380

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N  VG+ L+DMY  C       R F  + DK +  W  +I GY QN+   EAL LF  
Sbjct: 381 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 440

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           + +   +  +   + S++ A    ++    + IH H ++ GL  D  +QN L+D+Y +  
Sbjct: 441 VAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR 498

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +  +  +F+ ++ +D VSW +MI+   + G   +A+ L R M                E
Sbjct: 499 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV---------------E 543

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           T L    +S+ L+ +L    +LSAL KG+EIH Y +R     +  +  A+VDMYA CG L
Sbjct: 544 TGL--SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 601

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A+ VFD +  + ++ +  +I AYGMHG G+  +EL   M     R   V P+ ++F+A
Sbjct: 602 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM-----RHENVSPDHISFLA 656

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           L  ACSH+G++ EG      M+ +Y +EP P+HY C+VD+LGRA  V +A++ + MM  E
Sbjct: 657 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 716

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
              A  W +LL ACR H   EIGEIAAQ L  LEP    + VL+SN+++    W+    V
Sbjct: 717 -PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 775

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE-GYVPD 794
           R KMK  G+ K PGCSWIE   ++HKF A D SH +S++++  L  ++ ++ +E GYV D
Sbjct: 776 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVAD 835

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           T  VLHNV+E EK  +L GHSE++AIA+G
Sbjct: 836 TKFVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 264/529 (49%), Gaps = 35/529 (6%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVFD + ++   +WN+MI      G+   AL  +  M    V     +  ++  AC+ L 
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL- 158

Query: 195 RRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWN 252
            RD +R G ++H   +++G  +T FI+NAL++MYAK   +  A+ LF  F+++ D V WN
Sbjct: 159 -RD-IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +I+SS S + K LE +   R+M + G  P+  +I S L AC        GKEIHA  L++
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
                  +V +AL+ MY  C ++    R+   +++  +  WN++I GY QN   +EAL  
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F  M   AG   +  +M+S++ A  R         +H + IK G   +  V N L+DMYS
Sbjct: 337 FSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 395

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           +          F  M  +D +SW T+I GY     H +AL L R++     E        
Sbjct: 396 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME-------- 447

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
           +DE +L          ++L     L ++   KEIH + +R  L  D V+ + LVD+Y KC
Sbjct: 448 IDEMILG---------SILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKC 497

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
             + +A RVF+ +  ++V++W  +I +  ++G   E +EL + MV  G     +  + V 
Sbjct: 498 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-----LSADSVA 552

Query: 613 FIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS-----PDHYACVVDL 655
            + + +A +    +++G ++  Y ++  + +E S      D YAC  DL
Sbjct: 553 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 601



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 21/367 (5%)

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
           R    + +F    DR   +WNT++ +   N +   A+     M + G+     S  ++L 
Sbjct: 94  RAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 153

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           AC+ L  + +G E+H+  ++        F+ +ALV MY    ++   RR+FD   +K  A
Sbjct: 154 ACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 212

Query: 352 -LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
            LWN++++ Y  +    E L LF +M  + G  PN+ T+ S + AC         + IH 
Sbjct: 213 VLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 271

Query: 411 HAIKLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
             +K      + YV NAL+ MY+R G++  ++ I   M   D V+WN++I GY     + 
Sbjct: 272 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 331

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL    +M                      K + +++ +++   G LS L  G E+HAY
Sbjct: 332 EALEFFSDM-----------------IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 374

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            I++   +++ VG+ L+DMY+KC    +  R F  M  +++I+W  +I  Y  +    E 
Sbjct: 375 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 434

Query: 590 LELLKNM 596
           LEL +++
Sbjct: 435 LELFRDV 441



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 26/325 (8%)

Query: 311 RNDILIDNSFVGS-ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           R D+  +NS V + A V   C  R      +VFD + D+    WN MI  Y  N     A
Sbjct: 70  RLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASA 129

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L L+  M  V G+    ++  +++ AC +         +H   +KLG     ++ NAL+ 
Sbjct: 130 LALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 188

Query: 430 MYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           MY++   +  ++ +FD  + + D V WN++++ Y+  G+  + L L REM          
Sbjct: 189 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH--------- 239

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVGSALVD 547
                   +  P PNS T+++ L  C   S    GKEIHA  +++   ++++ V +AL+ 
Sbjct: 240 --------MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 291

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY +CG +  A R+   M   +V+TWN +I  Y  +   +E LE   +M+A G      K
Sbjct: 292 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-----K 346

Query: 608 PNEVTFIALFAACSHSGMVSEGMDL 632
            +EV+  ++ AA      +  GM+L
Sbjct: 347 SDEVSMTSIIAASGRLSNLLAGMEL 371


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/594 (40%), Positives = 354/594 (59%), Gaps = 26/594 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S++ AC+    LD  + IHA+ L       + F+ ++L+ +YC C  V   RRVFD +  
Sbjct: 69  SLITACARYRSLDDARAIHAH-LAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPA 127

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W ++I GY QN+  +EAL L   M       PN  T +S++ A   S +    E 
Sbjct: 128 RDMCSWTSLIAGYAQNDMPDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH   +K     D YV +AL+DMY+R GR++++  +FD +E ++ VSWN +I G+   G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
               L++  EMQ       RN            +    T  +V      + AL +GK +H
Sbjct: 247 GETTLLMFAEMQ-------RNGF----------EATHFTYSSVFSAIAGIGALEQGKWVH 289

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++       VG+ ++DMYAK G +  AR+VFD +  ++V+TWN ++ A+  +G G+
Sbjct: 290 AHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR 349

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + M     R   V  N++TF+++  ACSH G+V EG   F  MK+ Y +EP  D
Sbjct: 350 EAVTHFEEM-----RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEID 403

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY  VVDLLGRAG + DA   I  MP +   A  W +LLG+CR+H+N +IG+ AA ++F 
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKMPMK-PTAAVWGALLGSCRMHKNAKIGQFAADHVFE 462

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+PD     VLL NIY+S   WD A  VRK MK  GV+KEP CSW+E  + +H F+A D 
Sbjct: 463 LDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDD 522

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H +SE+++   E +S ++RK GYVP+T  VL +V+E+E++  L  HSEK+A+AF ++N 
Sbjct: 523 THPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINM 582

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           P G TIR+ KN+R+C DCH A ++ISK+  REI++RD  RFHHF +G+CSCGDY
Sbjct: 583 PLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 183/370 (49%), Gaps = 22/370 (5%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N+L+ +Y K G V DA+ +F     RD+ SW ++++  +QND   EA+  L  M 
Sbjct: 98  SVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM- 156

Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           LRG  KP+G + AS+L A         G++IHA  ++ D   D+ +VGSAL+DMY  C  
Sbjct: 157 LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYD-WHDDVYVGSALLDMYARCGR 215

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    VFD +  K    WNA+I G+ +    E  L++F +M+   G      T SSV  
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQR-NGFEATHFTYSSVFS 274

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A     A    + +H H IK G     +V N ++DMY++ G +  ++ +FD ++ +D V+
Sbjct: 275 AIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN+M+T +    Q+G    L RE     EE  +  V+           N IT +++L  C
Sbjct: 335 WNSMLTAF---AQYG----LGREAVTHFEEMRKCGVH----------LNQITFLSILTAC 377

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITW 573
                + +GK+         L  ++     +VD+  + G LN A      MP++     W
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 574 NVIIMAYGMH 583
             ++ +  MH
Sbjct: 438 GALLGSCRMH 447



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 170/319 (53%), Gaps = 10/319 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + +++ A A  + L   + IHAH+    +   SV + N+L+++Y KCG+ + D  +VFD 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFA-GSVFLDNSLIHLYCKCGA-VADARRVFDG 124

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +D  SW S+IA   +    D AL     ML    +P+ FT  S+ L  +  S   G 
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL-LKAAGASASSG- 182

Query: 200 RLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
            +G Q+H  +++  +W  + ++ +AL+ MYA+ GR+D A  +F   E ++ VSWN +++ 
Sbjct: 183 -IGEQIHALTVKY-DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAG 240

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            ++       ++   +M   G +    + +SV  A + +  L+ GK +HA+ +++   + 
Sbjct: 241 FARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL- 299

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           ++FVG+ ++DMY     +   R+VFD +  K +  WN+M+T + Q     EA+  F +M 
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR 359

Query: 378 EVAGLWPNATTMSSVVPAC 396
           +  G+  N  T  S++ AC
Sbjct: 360 KC-GVHLNQITFLSILTAC 377



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 141/263 (53%), Gaps = 8/263 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+++   EA+     M R   +P+ F F ++LKA        +G+QIHA  
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VKY +    V V + L++MY +CG  DM     VFD++  K+ VSWN++IA   R G  +
Sbjct: 192 VKYDWH-DDVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMN 221
             L  F  M  +  E + FT  SV  A + +     L  G+ VH + ++ GE  + F+ N
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG---ALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MYAK G + DA+ +F   + +D+V+WN+++++ +Q     EAV    +M   G+  
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 282 DGVSIASVLPACSHLEMLDTGKE 304
           + ++  S+L ACSH  ++  GK+
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQ 388


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/635 (38%), Positives = 381/635 (60%), Gaps = 31/635 (4%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++ SL +     +A+  L         P   +   ++ +C+    L  G ++H   + 
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCCEP----NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +    D  F+ + L++MY     ++  R+VFD   ++ I +WNA+          +E L 
Sbjct: 107 SGFDQD-PFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLD 165

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSE--AFPDKEG--IHGHAIKLGLGRDRYVQNAL 427
           L+++M  + G+  +  T + V+ ACV SE    P ++G  IH H ++ G   + +V   L
Sbjct: 166 LYVQMNWI-GIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTL 224

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +D+Y++ G +  + ++F  M  ++ VSW+ MI  +        AL L + M         
Sbjct: 225 LDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLM--------- 275

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
             + +  ++V    PNS+T++ VL  C  L+AL +GK IH Y +R  L + + V +AL+ 
Sbjct: 276 --MLEAHDSV----PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALIT 329

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY +CG +   +RVFD M  R+V++WN +I  YGMHG G++ +++ +NM+ +GS      
Sbjct: 330 MYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGS-----S 384

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ ++FI +  ACSH+G+V EG  LF  M   Y I P  +HYAC+VDLLGRA ++++A +
Sbjct: 385 PSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 444

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  M  E      W SLLG+CRIH NVE+ E A+  LF LEP  A +YVLL++IY+ A+
Sbjct: 445 LIEDMHFE-PGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAK 503

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +W +A  V K ++  G++K PGCSWIE   +++ F++ D  + Q E++H  L  LS  M+
Sbjct: 504 MWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMK 563

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
            +GYVP T+ VL++++EEEKE ++ GHSEKLA+AFG++NT  G TIR+ KNLR+C DCH 
Sbjct: 564 AQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHA 623

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TKFISK  +REI++RDV RFHHFK+G CSCGDYW
Sbjct: 624 VTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 181/382 (47%), Gaps = 31/382 (8%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRDGLRLGRQVHG 207
           N +I +LC+ G    A+     +L     P+  T   +  +C+   S  DGL + R++  
Sbjct: 51  NQLIQSLCKGGNLKQAIH----LLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 208 NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           +     + + F+   L+ MY +LG +D A+ +F    +R +  WN +  +L+      E 
Sbjct: 107 SGF---DQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKEL 163

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEM----LDTGKEIHAYALRNDILIDNSFVGS 323
           +    QM   GI  D  +   VL AC   E+    L  GKEIHA+ LR+     N  V +
Sbjct: 164 LDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYE-ANIHVMT 222

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF-IKMEEVAGL 382
            L+D+Y     V     VF  +  K    W+AMI  + +NE   +AL LF + M E    
Sbjct: 223 TLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDS 282

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN+ TM +V+ AC    A    + IHG+ ++ GL     V NAL+ MY R G I + + 
Sbjct: 283 VPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQR 342

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD+M+ RD VSWN++I+ Y   G HG     ++  +NM  + +               P
Sbjct: 343 VFDNMKNRDVVSWNSLISIY---GMHGFGKKAIQIFENMIHQGS--------------SP 385

Query: 503 NSITLMTVLPGCGALSALAKGK 524
           + I+ +TVL  C     + +GK
Sbjct: 386 SYISFITVLGACSHAGLVEEGK 407



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 195/399 (48%), Gaps = 31/399 (7%)

Query: 66  IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK 125
           I +   +  P    F  ++ + A    LS G  +H  +V  G+      +A  L+NMY +
Sbjct: 67  IHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPF-LATKLINMYYE 125

Query: 126 CGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
            GS +    KVFD   E+    WN++   L   G     L+ +  M +  +    FT   
Sbjct: 126 LGS-IDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTF 184

Query: 186 VALAC--SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           V  AC  S LS    L+ G+++H + LR G E N  +M  L+ +YAK G V  A ++F +
Sbjct: 185 VLKACVVSELS-VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCA 243

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK--PDGVSIASVLPACSHLEMLD 300
              ++ VSW+ +++  ++N+  ++A+   + M L      P+ V++ +VL AC+ L  L+
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALE 303

Query: 301 TGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
            GK IH Y LR    +D+   V +AL+ MY  C E+  G+RVFD + ++ +  WN++I+ 
Sbjct: 304 QGKLIHGYILRRG--LDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISI 361

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----------EAFPDKEGIH 409
           YG + + ++A+ +F  M    G  P+  +  +V+ AC  +          E+   K  IH
Sbjct: 362 YGMHGFGKKAIQIFENMIH-QGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIH 420

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
                   G + Y    ++D+  R  R++ +  + +DM 
Sbjct: 421 P-------GMEHYA--CMVDLLGRANRLDEAIKLIEDMH 450



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 12/274 (4%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA----GIQD 92
           ++ R    W    R+ A     +E +  Y++M    I  D F +  VLKA       +  
Sbjct: 139 TRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSP 198

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  GK+IHAH++++GY  +++ V  TL+++Y K GS  +    VF  +  K+ VSW++MI
Sbjct: 199 LQKGKEIHAHILRHGYE-ANIHVMTTLLDVYAKFGSVSY-ANSVFCAMPTKNFVSWSAMI 256

Query: 153 ATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           A   +      ALE F++M+    +  P+S T+V+V  AC+ L+    L  G+ +HG  L
Sbjct: 257 ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLA---ALEQGKLIHGYIL 313

Query: 211 RVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           R G  +   ++NAL+ MY + G +   + +F + ++RD+VSWN+++S    +    +A+ 
Sbjct: 314 RRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQ 373

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
               M  +G  P  +S  +VL ACSH  +++ GK
Sbjct: 374 IFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/603 (41%), Positives = 359/603 (59%), Gaps = 34/603 (5%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           S+ S LP C+ L+ L   K+I A++    L+ND+ I    + S   +       ++   +
Sbjct: 28  SLLSCLPKCTSLKEL---KQIQAFSIKTHLQNDLQILTKLINSCTQNP--TTASMDYAHQ 82

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F+ I    I L+N+M  GY ++    +A+ LFIK      L P+  T  S++ ACV ++
Sbjct: 83  LFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNY-NLLPDDYTFPSLLKACVVAK 141

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           AF   + +H  AIKLGL  + YV   L++MY+    ++ ++ +FD++     VS+N +IT
Sbjct: 142 AFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIIT 201

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY    +  +AL L R++Q                   + KPN +T+++VL  C  L AL
Sbjct: 202 GYARSSRPNEALSLFRQLQ-----------------ARKLKPNDVTVLSVLSSCALLGAL 244

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             GK IH Y  +N L   V V +AL+DMYAKCG L+ A  VF+ M VR+   W+ +I+AY
Sbjct: 245 DLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAY 304

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            MHG+GQ+V+ + + M        +V+P+E+TF+ L  ACSH+G+V EG   FY M + Y
Sbjct: 305 AMHGQGQDVMSMFEEMAR-----AKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVY 359

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GI P   HY C+VDLLGRAG + +AY+ I+ +P +      W +LL +C  H N+E+ + 
Sbjct: 360 GIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIK-PTPILWRTLLSSCSSHGNLELAKQ 418

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
               +  L+      YV+LSN+ + A  W+    +RK M   G  K PGCS IE  + +H
Sbjct: 419 VMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVH 478

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGHSEKLA 819
           +F +GDG H  S  LH  L+ L + ++  GYVPDTS V+H ++ +EEKE  L  HSEKLA
Sbjct: 479 EFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLA 538

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           I+FG+LNTPPGTTIRV KNLRVC DCH A K IS +  REIILRDV+RFHHFK+G CSCG
Sbjct: 539 ISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCG 598

Query: 880 DYW 882
           DYW
Sbjct: 599 DYW 601



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 197/416 (47%), Gaps = 28/416 (6%)

Query: 77  NFAFPA-VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN--MYGKCGSDMWDV 133
           N  +P+ +L  +     L   KQI A  +K  +  + + +   L+N        + M   
Sbjct: 22  NTTYPSSLLSCLPKCTSLKELKQIQAFSIK-THLQNDLQILTKLINSCTQNPTTASMDYA 80

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           +++F+ I + D V +NSM     R      A+  F   L  N+ P  +T  S+  AC   
Sbjct: 81  HQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACV-- 138

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                 + G+Q+H  ++++G   N ++   L+ MYA    VD A+ +F    +  +VS+N
Sbjct: 139 -VAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYN 197

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            I++  +++ +  EA+   RQ+  R +KP+ V++ SVL +C+ L  LD GK IH Y  +N
Sbjct: 198 AIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN 257

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L     V +AL+DMY  C  ++    VF+ +S +    W+AMI  Y  +   ++ + +
Sbjct: 258 G-LDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSM 316

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQN 425
           F +M   A + P+  T   ++ AC  +         F     ++G    +  G   Y   
Sbjct: 317 FEEMAR-AKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYG----IIPGIKHY--G 369

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDALMLLREMQN 480
            ++D+  R G +  +    D++ ++ T + W T+++    C  HG+ L L +++ N
Sbjct: 370 CMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS---CSSHGN-LELAKQVMN 421



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 137/255 (53%), Gaps = 6/255 (2%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
            R  +RSN   +AI  +I+    ++ PD++ FP++LKA    +    GKQ+H   +K G 
Sbjct: 99  FRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGL 158

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
              +  V  TL+NMY  C +D+    +VFD I E   VS+N++I    R  + + AL  F
Sbjct: 159 N-ENPYVCPTLINMYAGC-NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLF 216

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMY 227
           R +    ++P+  T++SV  +C+ L     L LG+ +H    + G      +N AL+ MY
Sbjct: 217 RQLQARKLKPNDVTVLSVLSSCALLG---ALDLGKWIHEYVKKNGLDKYVKVNTALIDMY 273

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK G +D A ++F+S   RD  +W+ ++ + + + +  + +    +MA   ++PD ++  
Sbjct: 274 AKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFL 333

Query: 288 SVLPACSHLEMLDTG 302
            +L ACSH  ++D G
Sbjct: 334 GLLYACSHTGLVDEG 348



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C  S+   +   ARS++  EA+  + ++    ++P++    +VL + A +  L LGK IH
Sbjct: 192 CVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIH 251

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V K G     V V   L++MY KCGS +     VF+ ++ +D  +W++MI      G+
Sbjct: 252 EYVKKNGLD-KYVKVNTALIDMYAKCGS-LDGAISVFESMSVRDTQAWSAMIVAYAMHGQ 309

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLR 200
               +  F  M  + V+P   T + +  ACS+    D G R
Sbjct: 310 GQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFR 350


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/747 (34%), Positives = 413/747 (55%), Gaps = 76/747 (10%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR---V 233
           PSS  L+    +C +  +      G Q+H  ++  G     F ++ L++ ++ LG    +
Sbjct: 10  PSSLCLLE---SCKSFKQ------GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGL 60

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP-DGVSIASVLPA 292
           D ++ LF   +  +L  WNT++   S++D   EA++    M  +GI P +  +   +L +
Sbjct: 61  DHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNS 120

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L  L+ G E+H++ +++    D  FV +AL+ +Y     +   R +FD    + +  
Sbjct: 121 CARLSSLEPGHEVHSHIIKHGFESD-LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVS 179

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC-----------VRSEA 401
           +N MI GY +    E AL LF +M+  +G+ P+  T  ++   C           + ++ 
Sbjct: 180 YNTMIKGYAEVNQPESALCLFGEMQN-SGILPDEFTFVALFSVCSVLNEPNVGKQIHAQV 238

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDM-----------------------YSRMGRIE 438
           + +   I  + +      D Y +  L+++                       Y+R G I 
Sbjct: 239 YKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEIN 298

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           +++ +F+ M  RD +SW  MI+GY+  GQ  +AL L +EM+                  L
Sbjct: 299 VARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEME-----------------AL 341

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
             KP+ +TL+ VL  C  L A   GK + H Y    +   + ++ +A++DMYAKCG ++ 
Sbjct: 342 GIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDS 401

Query: 558 ARRVFDLMP--VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           A  +F  +   ++    +N +I     HG G+  + + + +++ G     +KP+EVTF+ 
Sbjct: 402 ALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTG-----LKPDEVTFVG 456

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  AC HSG++ EG  LF  M + YGI+P  +HY C+VDLLGR G +E+AY L+  MP E
Sbjct: 457 VLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE 516

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            +    W +LL ACR H NV+IGEIA Q L  +E    + YVLLSNI + A  W++A  V
Sbjct: 517 ANSV-IWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 575

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           RK M++ G+RK PG S+IE G  IH+F+A D SH Q +++   L++++ R++  GYVP+T
Sbjct: 576 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 635

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
           + V+ +++EEEKE+++  HSEKLA+AFG++   P  TIR+ KNLR+C DCH+A K +S+I
Sbjct: 636 AQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEI 695

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             REI +RD  RFHHF+NG+CSC D+W
Sbjct: 696 YGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 225/476 (47%), Gaps = 51/476 (10%)

Query: 37  SQTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDL 93
           SQ  C     W   +R  +RS+  REAI+ Y+ M    I P +NF FP +L + A +  L
Sbjct: 68  SQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSL 127

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G ++H+H++K+G+  S + V N L+++Y   G ++     +FD    +D VS+N+MI 
Sbjct: 128 EPGHEVHSHIIKHGFE-SDLFVRNALIHLYSVFG-NLNLARTLFDESLVRDLVSYNTMIK 185

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN---SL 210
                 + + AL  F  M  S + P  FT V++   CS L+  +   +G+Q+H     +L
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN---VGKQIHAQVYKNL 242

Query: 211 RVGEWNTFIMNALMAMYAK--------------------------------LGRVDDAKT 238
           R  + N  + +A++ MYAK                                 G ++ A+ 
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           LF    +RD++SW  ++S  SQ  +  EA+   ++M   GIKPD V++ +VL AC+ L  
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGA 362

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALWNAM 356
            D GK ++   + N +   N+ + +A++DMY  C  ++    +F  +    K   ++N+M
Sbjct: 363 FDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 422

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-L 415
           I G  Q+   E A+ +F ++    GL P+  T   V+ AC  S    + + +        
Sbjct: 423 IAGLAQHGLGETAITVFRELIST-GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 481

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           G+         ++D+  R G +E +  +   M    ++V W  +++    C  HG+
Sbjct: 482 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA---CRTHGN 534



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 272/590 (46%), Gaps = 89/590 (15%)

Query: 81  PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKV-FD 138
           P+ L  +   +    G QIHA  +  G      +++  L++ +   GS D  D  ++ F 
Sbjct: 10  PSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISR-LISFFSLLGSKDGLDHSRLLFS 68

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRD 197
           +I   +   WN+MI    R      A+  +  M+   + P ++FT   +  +C+ LS   
Sbjct: 69  QIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS--- 125

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L  G +VH + ++ G E + F+ NAL+ +Y+  G ++ A+TLF     RDLVS+NT++ 
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIK 185

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             ++ ++   A+    +M   GI PD  +  ++   CS L   + GK+IHA   +N   I
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245

Query: 317 D-NSFVGSALVDMYCN--------------------------------CREVECGRRVFD 343
           D N  + SA+VDMY                                  C E+   R++F+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + ++ +  W AMI+GY Q     EAL LF +ME + G+ P+  T+ +V+ AC R  AF 
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEAL-GIKPDEVTLVAVLSACARLGAFD 364

Query: 404 DKEGIHGHAIKLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMIT 460
             + ++   I+ G+  ++  +  A+MDMY++ G I+ +  IF  +   ++    +N+MI 
Sbjct: 365 LGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIA 424

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G    G    A+ + RE               L  T L  KP+ +T + VL  CG    +
Sbjct: 425 GLAQHGLGETAITVFRE---------------LISTGL--KPDEVTFVGVLCACGHSGLI 467

Query: 521 AKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
            +GK++     +AY I+  +         +VD+  + GCL  A  +   MP   N + W 
Sbjct: 468 EEGKKLFESMFNAYGIKPQMEHY----GCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWR 523

Query: 575 VIIMAYGMHGE-------GQEVLE----------LLKNMVAEGSRGGEVK 607
            ++ A   HG        GQ++LE          LL N++A+ ++  E +
Sbjct: 524 ALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEAR 573


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/823 (34%), Positives = 449/823 (54%), Gaps = 75/823 (9%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           I AH+VK G+  ++   +N  VN + + G D+   ++VFD++  K+ +S N MI+   +F
Sbjct: 30  IDAHIVKTGFNPNTCR-SNFQVNNFLERG-DLVHAHQVFDQMPAKNTISLNMMISGHLKF 87

Query: 159 GK------------------WDLAL----------EAFRM---MLYSNVEPSSFTLVSVA 187
           GK                  W + +          EAFR+   M    +EP   TLV++ 
Sbjct: 88  GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
                L  ++ +    Q+H + +++G E+N  + N+L+  Y K   +  A  LFK   ++
Sbjct: 148 SGFGELETKNVIV---QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D V++N++++  S      EA+    ++   GIKP   + A++L A   L+    G+++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            + L+ +  + N FVG+AL+D Y    +V+   ++F  + +     +N +IT Y  N   
Sbjct: 265 GFVLKTN-FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQF 323

Query: 367 EEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIKLGLGRDR 421
           +E+  LF K++        +P AT +S      + + +   + G  IH  AI +G   + 
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLS------IATSSLNLRMGRQIHCQAITVGANFES 377

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V+NAL+DMY++    + ++ IFD++  + TV W  MI+ Y   G+H + + +  +M+  
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR-- 435

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                R  V            +  T  ++L  C  L++++ G+++H+  IR+   ++V  
Sbjct: 436 -----RTGV----------PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYS 480

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           GSAL+D YAKCGC+  A + F  MP RN ++WN +I AY  +G     L   + M+  G 
Sbjct: 481 GSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG- 539

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                KP+ V+F+++ +ACSH G V E +  F  M   Y + P  +HY  +VD+L R G+
Sbjct: 540 ----YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGR 595

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV--ASHYVLL 719
            ++A +L+  MP E  +   WSS+L +CRIH+N E+ + AA  LF +E D+  A+ Y+ +
Sbjct: 596 FDEAEKLMTEMPFEPSEI-MWSSVLNSCRIHKNHELAKKAADRLFNME-DLRDAAPYINM 653

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY+ A  WD    V+K M++ GVRK P  SW+E   + H F A D SH + +++   +
Sbjct: 654 SNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKI 713

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
             LS+ M K+GY PDT+C LH+V+E  K   L  HSE+ AIAF ++NTP G+ I V KNL
Sbjct: 714 NALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNL 773

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R C DCH A K IS+I  REII+RD  RFHHFK+G CSCGDYW
Sbjct: 774 RACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 261/557 (46%), Gaps = 39/557 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +    +SNQ +EA   Y +M R  I+PD      +L     ++  ++
Sbjct: 99  GMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNV 158

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
             QIH HV+K GY   ++ V N+LV+ Y K    ++   ++F  +  KD V++NS++   
Sbjct: 159 IVQIHTHVIKLGYEY-NLMVCNSLVDAYCKTHC-LYLASQLFKHMLNKDTVTFNSLMTGY 216

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G  + A+E F  +  S ++PS FT  ++  A   L   D  + G+QVHG  L+    
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL---DDTKFGQQVHGFVLKTNFV 273

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           WN F+ NAL+  Y+K  +VD+   LF    + D +S+N +++S + N +F E+    R++
Sbjct: 274 WNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKL 333

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                       A++L   +    L  G++IH  A+      + S V +ALVDMY  C  
Sbjct: 334 QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE-SRVENALVDMYAKCNG 392

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            +  +++FD I+ K    W AMI+ Y Q    EE + +F  M    G+  +  T +S++ 
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILR 451

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC    +      +H   I+ G   + Y  +AL+D Y++ G +  +   F +M  R++VS
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I+ Y    Q+G+    L   Q M +                 KP+S++ ++VL  C
Sbjct: 512 WNALISAY---AQNGNVDGTLNSFQQMIQSGY--------------KPDSVSFLSVLSAC 554

Query: 515 G-------ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
                   AL       +I+    +    T      ++VD+  + G  + A ++   MP 
Sbjct: 555 SHCGFVEEALWHFNSMTQIYEVTPKREHYT------SMVDVLCRNGRFDEAEKLMTEMPF 608

Query: 568 R-NVITWNVIIMAYGMH 583
             + I W+ ++ +  +H
Sbjct: 609 EPSEIMWSSVLNSCRIH 625


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/685 (36%), Positives = 388/685 (56%), Gaps = 27/685 (3%)

Query: 201 LGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           LGR +H + +R  V    +F+ N L+ MY+KL  ++ A+ +      R +V+W +++S  
Sbjct: 24  LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
             N +FL A++    M    ++P+  +   V  A + +++  TGK+IH  AL+  ++ D 
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYD- 142

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            FVG +  DMYC          +FD +  + +A WNA I+   Q+    +A++ F +   
Sbjct: 143 VFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLC 202

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           V G  PN+ T  + + ACV          +H   ++ G   D  V N L+D Y + G I 
Sbjct: 203 VHG-EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIV 261

Query: 439 ISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            ++ +F+ +  R + VSW +M+                  +QN EEE+         + V
Sbjct: 262 SAEMVFNRIGNRKNVVSWCSMLAAL---------------VQNHEEERACMVFLQARKEV 306

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              +P    + +VL  C  L  L  G+ +HA A++  +  ++ VGSALVDMY KCG +  
Sbjct: 307 ---EPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIEN 363

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A +VF  +P RN++TWN +I  Y   G+    L L + M   GS G  ++P+ VT I++ 
Sbjct: 364 AEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTL-GSHG--IRPSYVTLISIL 420

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           + CS  G V  G+ +F  M+ +YGIEP  +H+ACVVDLLGR+G V+ AY+ I  M  +  
Sbjct: 421 SVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQ-P 479

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W +LLGACR+H   E+G+IAA+ LF L+   + ++V+LSN+ +SA  W++A  VRK
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
           +MK++G++K  G SWI   + IH F A D SH ++ ++   L  L   M++ GYVPDT+ 
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNL 599

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
            L ++ +EEK + +  HSEK+A+AFG++  P G  IR+ KNLR+C DCH A KFIS+I  
Sbjct: 600 SLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVG 659

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REII+RD  RFH FK+G CSC DYW
Sbjct: 660 REIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 246/486 (50%), Gaps = 31/486 (6%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           +  R   +W   +     + +F  A+L +  M R ++QP++F FP V KA A +Q    G
Sbjct: 68  THLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTG 127

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIH   +K G  +  V V  +  +MY K G    D   +FD + +++  +WN+ I+   
Sbjct: 128 KQIHGLALKGGM-IYDVFVGCSCFDMYCKTGFR-GDACNMFDEMPQRNLATWNAYISNAV 185

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           +  +   A+ AF+  L  + EP+S T  +   AC ++ R   L LGRQ+H   +R G + 
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVR---LNLGRQLHAFIVRCGYKE 242

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +  + N L+  Y K G +  A+ +F    +R ++VSW +++++L QN +   A M   Q 
Sbjct: 243 DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ- 301

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           A + ++P    I+SVL AC+ L  L+ G+ +HA A++  +  DN FVGSALVDMY  C  
Sbjct: 302 ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVE-DNIFVGSALVDMYGKCGS 360

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVV 393
           +E   +VF  + ++ +  WNAMI GY      + AL LF +M   + G+ P+  T+ S++
Sbjct: 361 IENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISIL 420

Query: 394 PACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR 450
             C R  A   + GI    +++L  G +   ++   ++D+  R G ++ +     +M ++
Sbjct: 421 SVCSRVGAV--ERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQ 478

Query: 451 DTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            T+S W  ++     C  HG       E+  +  EK    +++LD        N + L  
Sbjct: 479 PTISVWGALLGA---CRMHGKT-----ELGKIAAEK----LFELDHV---DSGNHVVLSN 523

Query: 510 VLPGCG 515
           +L   G
Sbjct: 524 MLASAG 529



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 254/521 (48%), Gaps = 29/521 (5%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           +I P N    ++L++        LG+ IHAH+++         ++N LVNMY K   D+ 
Sbjct: 2   NIHPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKL--DLL 58

Query: 132 DVYKVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC 190
           +  +    +T  +  V+W S+I+      ++  AL  F  M   NV+P+ FT   V  A 
Sbjct: 59  NSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKAS 118

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           + +        G+Q+HG +L+ G  ++ F+  +   MY K G   DA  +F     R+L 
Sbjct: 119 AFVQIP---MTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLA 175

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +WN  +S+  Q+ + L+A++  ++      +P+ ++  + L AC  +  L+ G+++HA+ 
Sbjct: 176 TWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFI 235

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK-IALWNAMITGYGQNEYDEE 368
           +R     D S V + L+D Y  C ++     VF+ I ++K +  W +M+    QN  +E 
Sbjct: 236 VRCGYKEDVS-VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEER 294

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A M+F++  +   + P    +SSV+ AC           +H  A+K  +  + +V +AL+
Sbjct: 295 ACMVFLQARK--EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALV 352

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY + G IE ++ +F ++  R+ V+WN MI GY      GD  M LR  + M       
Sbjct: 353 DMYGKCGSIENAEQVFSELPERNLVTWNAMIGGY---AHQGDIDMALRLFEEMT------ 403

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVD 547
               L    +R  P+ +TL+++L  C  + A+ +G +I      N  +       + +VD
Sbjct: 404 ----LGSHGIR--PSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVD 457

Query: 548 MYAKCGCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGEGQ 587
           +  + G ++ A      M ++  I+ W  ++ A  MHG+ +
Sbjct: 458 LLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/596 (40%), Positives = 356/596 (59%), Gaps = 26/596 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           A+ L  C   +    GK +H   L+    +D  F  + L++MY     +    ++FD + 
Sbjct: 42  ANALQDCIQKDEPSRGKGLHCEILKRGGCLD-LFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++    +  +I GY ++    EA+ LF+++     + PN  T +SV+ AC   E      
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRLHR--EVLPNQFTFASVLQACATMEGLNLGN 158

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH H IK+GL  D +V NALMD+Y++ GR+E S  +F +   R+ V+WNT+I G+    
Sbjct: 159 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV--- 215

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q GD    LR   NM E               R +   +T  + L  C +L+AL  G +I
Sbjct: 216 QLGDGEKALRLFLNMLE--------------YRVQATEVTYSSALRACASLAALEPGLQI 261

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H+  ++     D+VV +AL+DMYAKCG +  AR VFDLM  ++ ++WN +I  Y MHG G
Sbjct: 262 HSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLG 321

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +E L +   M     +  EVKP+++TF+ + +AC+++G++ +G   F  M  D+GIEP  
Sbjct: 322 REALRIFDKM-----QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCI 376

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C+V LLGR G ++ A +LI+ +P +      W +LLGAC IH ++E+G I+AQ + 
Sbjct: 377 EHYTCMVWLLGRGGHLDKAVKLIDEIPFQ-PSVMVWRALLGACVIHNDIELGRISAQRVL 435

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +EP   + +VLLSN+Y++A+ WD    VRK MK  GV+KEPG SWIE    +H F  GD
Sbjct: 436 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 495

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH +   ++G LE L  + +K GY+P+ + VL +V +EEKE LL  HSE+LA++FGI+ 
Sbjct: 496 TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIR 555

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TP G+ IR+ KNLR+C DCH A K ISK+  REI++RD+ RFHHF+ G CSCGDYW
Sbjct: 556 TPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 182/339 (53%), Gaps = 28/339 (8%)

Query: 73  IQPDNF---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
           + P  F   A+   L+      + S GK +H  ++K G G   +   N L+NMY K  SD
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG-GCLDLFAWNILLNMYVK--SD 87

Query: 130 -MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            + D  K+FD + E++ +S+ ++I       ++  A+E F + L+  V P+ FT  SV  
Sbjct: 88  FLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF-VRLHREVLPNQFTFASVLQ 146

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC+ +   +GL LG Q+H + +++G   + F+ NALM +YAK GR++++  LF     R+
Sbjct: 147 ACATM---EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 203

Query: 248 LVSWNTIV---SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            V+WNT++     L   +K L   +FL  +  R ++   V+ +S L AC+ L  L+ G +
Sbjct: 204 DVTWNTVIVGHVQLGDGEKALR--LFLNMLEYR-VQATEVTYSSALRACASLAALEPGLQ 260

Query: 305 IHAYALRN----DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           IH+  ++     DI++ N     AL+DMY  C  ++  R VFD ++ +    WNAMI+GY
Sbjct: 261 IHSLTVKTTFDKDIVVTN-----ALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY 315

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             +    EAL +F KM+E   + P+  T   V+ AC  +
Sbjct: 316 SMHGLGREALRIFDKMQETE-VKPDKLTFVGVLSACANA 353



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 147/261 (56%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++  ++  A S +F EAI  ++ + R ++ P+ F F +VL+A A ++ L+LG QIH HV
Sbjct: 106 SFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGLNLGNQIHCHV 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S V V+N L+++Y KCG  M +  ++F     ++ V+WN++I    + G  + 
Sbjct: 165 IKIGLH-SDVFVSNALMDVYAKCGR-MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEK 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  ML   V+ +  T  S   AC++L+    L  G Q+H  +++   + +  + NA
Sbjct: 223 ALRLFLNMLEYRVQATEVTYSSALRACASLA---ALEPGLQIHSLTVKTTFDKDIVVTNA 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DA+ +F     +D VSWN ++S  S +    EA+    +M    +KPD
Sbjct: 280 LIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPD 339

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            ++   VL AC++  +LD G+
Sbjct: 340 KLTFVGVLSACANAGLLDQGQ 360



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 150/308 (48%), Gaps = 26/308 (8%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N+   ++ +  C++ +     +G+H   +K G   D +  N L++MY +   +  +  +F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D+M  R+T+S+ T+I GY    +  +A+ L                  L   VL   PN 
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELF---------------VRLHREVL---PNQ 138

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T  +VL  C  +  L  G +IH + I+  L +DV V +AL+D+YAKCG +  +  +F  
Sbjct: 139 FTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAE 198

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            P RN +TWN +I+ +   G+G++ L L  NM+        V+  EVT+ +   AC+   
Sbjct: 199 SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY-----RVQATEVTYSSALRACASLA 253

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
            +  G+ + + +      +        ++D+  + G ++DA  + ++M  + D+  +W++
Sbjct: 254 ALEPGLQI-HSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQ-DEV-SWNA 310

Query: 685 LLGACRIH 692
           ++    +H
Sbjct: 311 MISGYSMH 318


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/685 (36%), Positives = 389/685 (56%), Gaps = 64/685 (9%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACS 294
           A ++F++ ++ +L+ WNT++   + +   + A+ M++R ++L G  P+  S   +L +C+
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSL-GHLPNSYSFPFLLKSCA 75

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC------NCREV------------- 335
             +  + G++IHA  L+    +D  +V ++L+ MY       + R+V             
Sbjct: 76  KSKAFEEGRQIHAQVLKLGCGLDR-YVHTSLISMYARNGGLEDARKVFDASSHRDVVSCT 134

Query: 336 ------------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
                          R+VFD I+++ +  WNAMITGY +N   EEAL LF +M     + 
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT-NVR 193

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKL----GLGRDRYVQNALMDMYSRMGRIEI 439
           P+  T+ SVV AC +S +      +H          G      + NAL+D+YS+ G +E 
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +F+ +  +D VSWNT+I GYT    + +AL+L +EM    E                
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGE---------------- 297

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNF 557
             PN +TL++VLP C  L A+  G+ IH Y  + +  +  +  + ++L+DMYAKCG +  
Sbjct: 298 -CPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEA 356

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A +VF+ M  R++ +WN +I  + MHG      +L   M     RG  V+P+++TF+ L 
Sbjct: 357 AHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRM-----RGNRVEPDDITFVGLL 411

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACSHSG++  G  +F  M  DY + P  +HY C++DLLG +G  ++A ++I+ MP E D
Sbjct: 412 SACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPD 471

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W SLL AC+ H N+E+ E  AQ L  +EP+ +  YVLLSNIY++A  W+    VR 
Sbjct: 472 GV-IWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRG 530

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            +   G++K PGCS IE    +H+F+ GD  H +  +++  LE +  ++ + G+ PDTS 
Sbjct: 531 VLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSE 590

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VL  + EE KE  L  HSEKLAIAFG+++T PGT + + KNLRVC +CH+ATK ISKI  
Sbjct: 591 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 650

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI+ RD  RFHHF++G CSC DYW
Sbjct: 651 REIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 201/391 (51%), Gaps = 41/391 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A S+    A+  Y+ M      P++++FP +LK+ A  +    G+QIHA V+
Sbjct: 32  WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91

Query: 105 KYGYGLSSVTVANTLVNMYGKCGS------------------------------DMWDVY 134
           K G GL    V  +L++MY + G                               D     
Sbjct: 92  KLGCGLDRY-VHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSAR 150

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVFD ITE+D VSWN+MI      G+++ ALE F+ M+ +NV P   TLVSV  AC+   
Sbjct: 151 KVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACA--- 207

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTF-----IMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           +   + LGRQVH       + + F     I+NAL+ +Y+K G V+ A  LF+    +D+V
Sbjct: 208 QSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVV 267

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWNT++   +  + + EA++  ++M   G  P+ V++ SVLPAC+HL  +D G+ IH Y 
Sbjct: 268 SWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYI 327

Query: 310 LRNDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            +    + N + + ++L+DMY  C ++E   +VF+ +  + ++ WNAMI G+  +     
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANA 387

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           A  LF +M     + P+  T   ++ AC  S
Sbjct: 388 AFDLFSRMRG-NRVEPDDITFVGLLSACSHS 417



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 229/488 (46%), Gaps = 60/488 (12%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF+ I E + + WN+M+           ALE +  M+     P+S++   +  +C   ++
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSC---AK 76

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-------------- 240
                 GRQ+H   L++G   + ++  +L++MYA+ G ++DA+ +F              
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 241 --------------KSFE---DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                         K F+   +RD+VSWN +++   +N ++ EA+   ++M    ++PD 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF---VGSALVDMYCNCREVECGRR 340
            ++ SV+ AC+    ++ G+++H++   +D     S    + +AL+D+Y  C +VE    
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F+ +S K +  WN +I GY      +EAL+LF +M   +G  PN  T+ SV+PAC    
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLR-SGECPNDVTLLSVLPACAHLG 315

Query: 401 AFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           A      IH +  K   G+  +  ++ +L+DMY++ G IE +  +F+ M  R   SWN M
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+ + G+   A  L   M        R N         R +P+ IT + +L  C    
Sbjct: 376 IFGFAMHGRANAAFDLFSRM--------RGN---------RVEPDDITFVGLLSACSHSG 418

Query: 519 ALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            L  G++I     ++  L   +     ++D+    G    A  +   MP+  + + W  +
Sbjct: 419 LLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSL 478

Query: 577 IMAYGMHG 584
           + A   HG
Sbjct: 479 LKACKKHG 486



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 142/269 (52%), Gaps = 12/269 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + ++ EA+  + EM R++++PD     +V+ A A    + LG+Q+H+ V
Sbjct: 163 SWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWV 222

Query: 104 VK----YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
                 +G+  SS+ + N L+++Y KCG D+   + +F+ ++ KD VSWN++I       
Sbjct: 223 DDDDDDHGFS-SSLKIVNALIDLYSKCG-DVETAFGLFEGLSCKDVVSWNTLIGGYTHTN 280

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWN 216
            +  AL  F+ ML S   P+  TL+SV  AC++L   D   +GR +H      L+     
Sbjct: 281 LYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID---IGRWIHVYIDKKLKGVTNE 337

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           T +  +L+ MYAK G ++ A  +F S   R L SWN ++   + + +   A     +M  
Sbjct: 338 TSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRG 397

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEI 305
             ++PD ++   +L ACSH  +LD G++I
Sbjct: 398 NRVEPDDITFVGLLSACSHSGLLDLGRQI 426



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 36/243 (14%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L +A  VF+ +   N++ WN ++  +    +    LE+   MV+ G       PN  +F 
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-----PNSYSFP 68

Query: 615 ALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            L  +C+ S    EG  +  + +K   G++     +  ++ +  R G +EDA ++     
Sbjct: 69  FLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYV--HTSLISMYARNGGLEDARKV----- 121

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLF--LLEPDVASHYVLLSNIYSSAQLWD 730
             FD +     +     I      G+  +A+ +F  + E DV S   +++  Y     ++
Sbjct: 122 --FDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITG-YVENGRYE 178

Query: 731 KAMDVRKKMKEMGVRKEPG--------CSW---IEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           +A+++ K+M    VR + G        C+    IE G ++H ++         +  HGF 
Sbjct: 179 EALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVD------DDDDDHGFS 232

Query: 780 ENL 782
            +L
Sbjct: 233 SSL 235


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/722 (36%), Positives = 389/722 (53%), Gaps = 70/722 (9%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFE--DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR- 277
            +L++ YA  GR+ D+   F S     RD V  N ++S+ ++      AV   R +    
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 278 -GIKPDGVSIASVLPACSHLEMLDTGK--EIH--AYALRNDILIDNSFVGSALVDMYCNC 332
             ++PD  S  S+L A   +  L      ++H   + L    ++    V +AL+ +Y  C
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLS---VSNALIALYMKC 209

Query: 333 R----------------------------------EVECGRRVFDFISDKKIALWNAMIT 358
                                              +V   R  F+ I  +   +WNAMI+
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY Q+    EA  LF +M     + P+  T +S++ AC  +  F   + +HG  I+L   
Sbjct: 270 GYVQSGMCAEAFELFRRMVS-KRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPD 328

Query: 419 ----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
                   V NAL+ +YS+ G+I ++  IFD M ++D VSWNT+++GY   G   +A  +
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARI 388

Query: 475 LREMQNMEEEKNRNNVYD-----LDETVLR---------PKPNSITLMTVLPGCGALSAL 520
            +EM    E      V       L E  L+          KP   T    +  CG L AL
Sbjct: 389 FKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGAL 448

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             GK++HA+ ++         G+AL+ MYA+CG +  AR VF +MP  + ++WN +I A 
Sbjct: 449 KHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISAL 508

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
           G HG G+E LEL   MVA+G     + P+ ++F+ +  AC+H+G+V +G   F  M+ D+
Sbjct: 509 GQHGHGREALELFDQMVAQG-----IYPDRISFLTILTACNHAGLVDDGFQYFESMERDF 563

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GI P  DHYA ++DLLGRAG++ +A  LI  MP E   A  W ++L  CRI+ ++E+G  
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPA-IWEAILSGCRINGDMELGAY 622

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA  LF + P+    Y+LLSN YS+A  W  A  VRK M++ GV+KEPGCSWIE G+++H
Sbjct: 623 AADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVH 682

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            FL GD  H  + +++ FLE +  +MRK GYVPDT   L ++   EKE +L  HSE+LA+
Sbjct: 683 VFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAV 742

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           +FG+L  P G T+ V KNL++C DCH A  F+S+   REI++RDVRRFHHFK+G CSCG+
Sbjct: 743 SFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGN 802

Query: 881 YW 882
           YW
Sbjct: 803 YW 804



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 230/515 (44%), Gaps = 92/515 (17%)

Query: 31  SLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVA 88
           S+P+    T    + I +    AR++    A+  +  +  SD  ++PD+++F ++L AV 
Sbjct: 114 SVPVARRDTVLHNAMISAF---ARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVG 170

Query: 89  GIQDLSLGK--QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKD 144
            + DL++    Q+H  V K G G + ++V+N L+ +Y KC +     D  KV D + EKD
Sbjct: 171 QMHDLAVSHCTQLHCAVHKLGAG-AVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKD 229

Query: 145 Q-------------------------------VSWNSMIATLCRFGKWDLALEAFRMMLY 173
           +                               V WN+MI+   + G    A E FR M+ 
Sbjct: 230 ELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVS 289

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRL-GRQVHGNSLR-----VGEWNTFIMNALMAMY 227
             + P  FT  S+  AC+N     G  L G+ VHG  +R     V E    + NAL+ +Y
Sbjct: 290 KRIPPDEFTFTSLLSACANA----GFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLY 345

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG--------- 278
           +K G++  A  +F S   +D+VSWNTI+S   ++     A    ++M  +          
Sbjct: 346 SKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVS 405

Query: 279 ----------------------IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
                                 +KP   + A  + AC  L  L  GK++HA+ ++     
Sbjct: 406 GYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEA 465

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            NS  G+AL+ MY  C  V+  R VF  + +     WNAMI+  GQ+ +  EAL LF +M
Sbjct: 466 SNS-AGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQM 524

Query: 377 EEVAGLWPNATTMSSVVPAC----VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
               G++P+  +  +++ AC    +  + F   E +      +  G D Y +  L+D+  
Sbjct: 525 -VAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME-RDFGISPGEDHYAR--LIDLLG 580

Query: 433 RMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICG 466
           R GRI  ++ +   M    T + W  +++G  I G
Sbjct: 581 RAGRIGEARDLIKTMPFEPTPAIWEAILSGCRING 615



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 130/562 (23%), Positives = 222/562 (39%), Gaps = 98/562 (17%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRI--TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           A +LV+ Y   G  + D    FD +    +D V  N+MI+   R      A+  FR +L 
Sbjct: 92  ATSLVSAYAVAGR-LRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLA 150

Query: 174 SN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKL 230
           S+  + P  ++  S+  A   +     +    Q+H    ++G      + NAL+A+Y K 
Sbjct: 151 SDDSLRPDDYSFTSLLSAVGQMHDL-AVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209

Query: 231 ---GRVDDAKTLFKSFEDRDLVSWNTIV-------------------------------S 256
              G   DA+ +     ++D ++W TIV                               S
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR--NDI 314
              Q+    EA    R+M  + I PD  +  S+L AC++      GK +H   +R   D 
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDF 329

Query: 315 LIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNA------------------ 355
           + + +  V +ALV +Y    ++    ++FD ++ K +  WN                   
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIF 389

Query: 356 -------------MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
                        M++GY      E+AL LF +M     + P   T +  V AC    A 
Sbjct: 390 KEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS-EDVKPCDYTYAGAVAACGELGAL 448

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +H H ++ G        NAL+ MY+R G ++ ++ +F  M   D+VSWN MI+  
Sbjct: 449 KHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISAL 508

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              GQHG      RE   + ++     +Y          P+ I+ +T+L  C     +  
Sbjct: 509 ---GQHGHG----REALELFDQMVAQGIY----------PDRISFLTILTACNHAGLVDD 551

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAY 580
           G +      R+  ++      + L+D+  + G +  AR +   MP       W  I+   
Sbjct: 552 GFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGC 611

Query: 581 GMHGE---GQEVLELLKNMVAE 599
            ++G+   G    + L  MV E
Sbjct: 612 RINGDMELGAYAADQLFKMVPE 633


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 282/824 (34%), Positives = 450/824 (54%), Gaps = 77/824 (9%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           I AH+VK G+  ++   +N  VN + + G D+   ++VFD++  K+ +S N MI+   +F
Sbjct: 30  IDAHIVKTGFNPNTCR-SNFQVNNFLERG-DLVHAHQVFDQMPAKNTISLNMMISGHLKF 87

Query: 159 GK------------------WDLAL----------EAFRM---MLYSNVEPSSFTLVSVA 187
           GK                  W + +          EAFR+   M    +EP   TLV++ 
Sbjct: 88  GKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL 147

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
                L  ++ +    Q+H + +++G E+N  + N+L+  Y K   +  A  LFK   ++
Sbjct: 148 SGFGELETKNVIV---QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D V++N++++  S      EA+    ++   GIKP   + A++L A   L+    G+++H
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVH 264

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDFISDKKIALWNAMITGYGQNEY 365
            + L+ +  + N FVG+AL+D Y    +V E G+  ++      I+ +N +IT Y  N  
Sbjct: 265 GFVLKTN-FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGIS-YNVVITSYAWNGQ 322

Query: 366 DEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIKLGLGRD 420
            +E+  LF K++        +P AT +S      + + +   + G  IH  AI +G   +
Sbjct: 323 FKESFDLFRKLQFTRFDRRQFPFATLLS------IATSSLNLRMGRQIHCQAITVGANFE 376

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
             V+NAL+DMY++    + ++ IFD++  + TV W  MI+ Y   G+H + + +  +M+ 
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR- 435

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                 R  V            +  T  ++L  C  L++++ G+++H+  IR+   ++V 
Sbjct: 436 ------RTGV----------PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVY 479

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            GSAL+D YAKCGC+  A + F  MP RN ++WN +I AY  +G     L   + M+  G
Sbjct: 480 SGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG 539

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                 KP+ V+F+++ +ACSH G V E +  F  M   Y + P  +HY  +VD+L R G
Sbjct: 540 -----YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNG 594

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV--ASHYVL 718
           + ++A +L+  MP E  +   WSS+L +CRIH+N E+ + AA  LF +E D+  A+ Y+ 
Sbjct: 595 RFDEAEKLMTEMPFEPSEI-MWSSVLNSCRIHKNHELAKKAADRLFNME-DLRDAAPYIN 652

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           +SNIY+ A  WD    V+K M++ GVRK P  SW+E   + H F A D SH + +++   
Sbjct: 653 MSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRK 712

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           +  LS+ M K+GY PDT+C LH+V+E  K   L  HSE+ AIAF ++NTP G+ I V KN
Sbjct: 713 INALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKN 772

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LR C DCH A K IS+I  REII+RD  RFHHFK+G CSCGDYW
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 261/557 (46%), Gaps = 39/557 (7%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +    +SNQ +EA   Y +M R  I+PD      +L     ++  ++
Sbjct: 99  GMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNV 158

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
             QIH HV+K GY   ++ V N+LV+ Y K    ++   ++F  +  KD V++NS++   
Sbjct: 159 IVQIHTHVIKLGYEY-NLMVCNSLVDAYCKTHC-LYLASQLFKHMLNKDTVTFNSLMTGY 216

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G  + A+E F  +  S ++PS FT  ++  A   L   D  + G+QVHG  L+    
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL---DDTKFGQQVHGFVLKTNFV 273

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           WN F+ NAL+  Y+K  +VD+   LF    + D +S+N +++S + N +F E+    R++
Sbjct: 274 WNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKL 333

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
                       A++L   +    L  G++IH  A+      + S V +ALVDMY  C  
Sbjct: 334 QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE-SRVENALVDMYAKCNG 392

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            +  +++FD I+ K    W AMI+ Y Q    EE + +F  M    G+  +  T +S++ 
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILR 451

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC    +      +H   I+ G   + Y  +AL+D Y++ G +  +   F +M  R++VS
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I+ Y    Q+G+    L   Q M +                 KP+S++ ++VL  C
Sbjct: 512 WNALISAY---AQNGNVDGTLNSFQQMIQSGY--------------KPDSVSFLSVLSAC 554

Query: 515 G-------ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
                   AL       +I+    +    T      ++VD+  + G  + A ++   MP 
Sbjct: 555 SHCGFVEEALWHFNSMTQIYEVTPKREHYT------SMVDVLCRNGRFDEAEKLMTEMPF 608

Query: 568 R-NVITWNVIIMAYGMH 583
             + I W+ ++ +  +H
Sbjct: 609 EPSEIMWSSVLNSCRIH 625


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/700 (36%), Positives = 387/700 (55%), Gaps = 28/700 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSL- 258
           ++VH   LR G + + F  + L    A      +D A+ LF      +L +WNT++ +  
Sbjct: 42  KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYA 101

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S +D F   V+FL  +      P+  +   V+ A S L+    G  +H  A++    +D 
Sbjct: 102 SSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMD- 160

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            ++ ++LV  Y  C ++    R+F  IS K +  WN+MI+ + Q    E+AL LF+KME 
Sbjct: 161 LYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMER 220

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
              + PN+ TM  V+ AC +         +  +  + G+  D  + NA++DMY++ G ++
Sbjct: 221 -ENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVD 279

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME-------------EEK 485
            ++ +FD+M  RD  SW  M+ GY   G +  A ++   M   E               K
Sbjct: 280 DAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGK 339

Query: 486 NRNNVYDLDETVLR--PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
            +  +   +E  L    KP+ +TL++ L  C  L A+  G  IH Y  R  +  +  + S
Sbjct: 340 PKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLIS 399

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           +LVDMYAKCG L  A  VF  +  R+V  W+ +I   GMHG G+  ++L   M     + 
Sbjct: 400 SLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEM-----QE 454

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
            +VKPN VTF  +  ACSH+G+V EG   F++M+  YG+ P   HYAC+VD+LGRAG +E
Sbjct: 455 AKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLE 514

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A +LIN M      A  W +LLGAC +H NVE+GE+A+  L  LEP      VLLSNIY
Sbjct: 515 EAMELINEMSTT-PSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIY 573

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           +    W+K  ++RK M++  ++KEPGCS IE    +H+FL GD +H  S  ++  LE ++
Sbjct: 574 AKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIA 633

Query: 784 ERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            +++  GY P+ S +L  + E++ KE  L  HSEKLAIAFG++   P   IRV KNLR+C
Sbjct: 634 TKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRIC 693

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH   K +S++  R+I+LRD  RFHHF++G CSC DYW
Sbjct: 694 GDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 240/496 (48%), Gaps = 53/496 (10%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           L  +  LSS  T          +P P   T     W   +R+ A S+   ++ + ++++ 
Sbjct: 63  LFTASALSSFSTLDYARNLFDQIPQPNLYT-----WNTLIRAYASSSDPFQSFVIFLDLL 117

Query: 70  -RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            + +  P+ F FP V+KA + ++   +G  +H   +K  +G+  + + N+LV  YG CG 
Sbjct: 118 DKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMD-LYILNSLVRFYGACG- 175

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    ++F  I+ KD VSWNSMI+   +    + ALE F  M   NV P+S T+V V  
Sbjct: 176 DLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLS 235

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC   +++  L  GR V     R G + +  + NA++ MY K G VDDA+ LF    +RD
Sbjct: 236 AC---AKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292

Query: 248 LVS-------------------------------WNTIVSSLSQNDKFLEAVMFLRQMAL 276
           + S                               WN ++S+  QN K  EA+    ++ L
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352

Query: 277 RGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             I KPD V++ S L AC+ L  +D G  IH Y  R  I++ N  + S+LVDMY  C  +
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVL-NCHLISSLVDMYAKCGSL 411

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E    VF  + ++ + +W+AMI G G +   + A+ LF +M+E A + PN+ T ++V+ A
Sbjct: 412 EKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQE-AKVKPNSVTFTNVLCA 470

Query: 396 CVRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           C  +    D+  +  H ++   G+  +      ++D+  R G +E +  + ++M    + 
Sbjct: 471 CSHA-GLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSA 529

Query: 454 S-WNTMITGYTICGQH 468
           S W  ++     C  H
Sbjct: 530 SVWGALLGA---CSLH 542


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/716 (35%), Positives = 401/716 (56%), Gaps = 60/716 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+ +       D    A ++F++ ++ +L+ WNT+    
Sbjct: 50  RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
           + +   + A+     M   G+ P+  +   +L +C+  +    G++IH + L+     D+
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
            +  S +                           +AL+  Y +   +E  +++FD I  K
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNAMI+GY +    +EAL LF +M +   + P+ +TM +VV AC +S +      +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMK-TNIRPDESTMVTVVSACAQSGSIELGRQV 288

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H      G G +  + N+LMD+YS+ G +E +  +F+ +  +D +SWNT+I GYT    +
Sbjct: 289 HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLY 348

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L +EM    E                 +PN +T++++LP C  L A+  G+ IH 
Sbjct: 349 KEALLLFQEMLRSGE-----------------RPNDVTMLSILPACAHLGAIDIGRWIHV 391

Query: 529 YAIRNML-ATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           Y  + +  AT+   + ++L+DMYAKCG +  A +VF+ +  +++ +WN +I  + MHG  
Sbjct: 392 YIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++   M   G     ++P+++TF+ L +ACS SGM+  G  +F  M  DY I P  
Sbjct: 452 DAAFDIFSRMRKIG-----IEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKL 506

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C++DLLG +G  ++A ++IN M  E D    W SLL AC+I  NVE+GE  AQNL 
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGV-IWCSLLKACKIRGNVELGESFAQNLI 565

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +EP+    YVLLSNIY++A  W++   +R  + + G++K PGCS IE    +H+F+ GD
Sbjct: 566 KIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H ++ +++G LE +   + K G+VPDTS VL  + EE KE  L  HSEKLAIAFG+++
Sbjct: 626 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 685

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 686 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 233/464 (50%), Gaps = 53/464 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+++ FP +LK+ A  +    G+QIH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 161

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
           K GY L  + V  +L+++Y + G  + D  KVFDR                         
Sbjct: 162 KLGYDLD-LFVHTSLISVYVQNGR-LEDARKVFDRSPHRDVVSYTALIKGYASRGYIESA 219

Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                 I  KD VSWN+MI+     G +  ALE F+ M+ +N+ P   T+V+V  AC   
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC--- 276

Query: 194 SRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           ++   + LGRQVH   +    G  N  I+N+LM +Y+K G ++ A  LF+    +D++SW
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGS-NLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA-L 310
           NT++   +  + + EA++  ++M   G +P+ V++ S+LPAC+HL  +D G+ IH Y   
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           R     + S + ++L+DMY  C ++E   +VF+ I  K ++ WNAMI G+  +   + A 
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL--- 427
            +F +M ++ G+ P+  T   ++ AC RS          G  I   + +D  +   L   
Sbjct: 456 DIFSRMRKI-GIEPDDITFVGLLSACSRSGMLD-----LGRHIFRTMTQDYKITPKLEHY 509

Query: 428 ---MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
              +D+    G  + ++ + ++ME+  D V W +++    I G 
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGN 553



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 141/265 (53%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  ++EA+  + EM +++I+PD      V+ A A    + LG+Q+H+ +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWI 292

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N+L+++Y KCG ++     +F+ +  KD +SWN++I        +  
Sbjct: 293 DDHGFG-SNLKIVNSLMDLYSKCG-ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKE 350

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++S+  AC++L   D   +GR +H      L+     + + 
Sbjct: 351 ALLLFQEMLRSGERPNDVTMLSILPACAHLGAID---IGRWIHVYIDKRLKSATNASSLR 407

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A  +F S   + L SWN ++   + + +   A     +M   GI+
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACS   MLD G+ I
Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHI 492


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 352/595 (59%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S + AC+  + L+  ++IHA+ L +     ++F+ ++L+ MYC CR V   R VFD +  
Sbjct: 56  SFITACAQSKNLEDARKIHAH-LGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRR 114

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  W ++I GY QN+   EA+ L   M +     PN  T +S++ A            
Sbjct: 115 KDMVSWTSLIAGYAQNDMPVEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGTGRQ 173

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH  A+K G   D YV +AL+DMY+R G+++++  +FD ++ ++ VSWN +I+G+   G 
Sbjct: 174 IHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              ALM   EM        RN            +    T  +V      L AL +GK +H
Sbjct: 234 GESALMTFAEML-------RNGF----------EATHFTYSSVFSSIARLGALEQGKWVH 276

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++       VG+ L+DMYAK G +  AR+VFD +  ++++TWN ++ A+  +G G+
Sbjct: 277 AHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGK 336

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + M   G     V  N++TF+ +  ACSH G+V EG   F  MK+ Y +EP  D
Sbjct: 337 EAVSHFEEMRKSG-----VYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEID 390

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY  VV LLGRAG +  A   I  MP E   A  W +LL ACR+H+N ++G+ AA ++F 
Sbjct: 391 HYVTVVALLGRAGLLNYALVFIFKMPME-PTAAVWGALLAACRMHKNAKVGQFAADHVFE 449

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+PD +   VLL NIY+S   WD A  VR  MK  GV+KEP CSW+E  + +H F+A D 
Sbjct: 450 LDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDD 509

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H Q+E+++     +S+++RKEGYVPD   VL +V+++EKE  L  HSEKLA+AF ++  
Sbjct: 510 THPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEM 569

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G TIR+ KN+R+C DCH A K+ISK+  REI++RD  RFHHF +G+CSCGDYW
Sbjct: 570 PAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 199/412 (48%), Gaps = 28/412 (6%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIMNALMAMYAKLGR 232
           + P+     S   AC+   +   L   R++H   G+S   G+   F+ N+L+ MY K   
Sbjct: 47  LAPTPRVYRSFITACA---QSKNLEDARKIHAHLGSSRFAGD--AFLDNSLIHMYCKCRS 101

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           V DA+ +F     +D+VSW ++++  +QND  +EA+  L  M     KP+G + AS+L A
Sbjct: 102 VLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
                   TG++IHA A++     ++ +VGSAL+DMY  C +++    VFD +  K    
Sbjct: 162 AGAYADSGTGRQIHALAVKCG-WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WNA+I+G+ +    E ALM F +M    G      T SSV  +  R  A    + +H H 
Sbjct: 221 WNALISGFARKGDGESALMTFAEMLR-NGFEATHFTYSSVFSSIARLGALEQGKWVHAHV 279

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK       +V N L+DMY++ G +  ++ +FD ++ +D V+WN+M+T +    Q+G   
Sbjct: 280 IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAF---AQYG--- 333

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L +E  +  EE  ++ VY           N IT + +L  C     + +GK        
Sbjct: 334 -LGKEAVSHFEEMRKSGVY----------LNQITFLCILTACSHGGLVKEGKRYFEMMKE 382

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
             L  ++     +V +  + G LN+A      MP+      W  ++ A  MH
Sbjct: 383 YDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 177/330 (53%), Gaps = 16/330 (4%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           ++ P    + + + A A  ++L   ++IHAH+    +      + N+L++MY KC S + 
Sbjct: 46  ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFA-GDAFLDNSLIHMYCKCRSVL- 103

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM---MLYSNVEPSSFTLVSVAL 188
           D   VFD++  KD VSW S+IA    + + D+ +EA  +   ML    +P+ FT  S+  
Sbjct: 104 DARNVFDQMRRKDMVSWTSLIAG---YAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           A    +       GRQ+H  +++ G W  + ++ +AL+ MYA+ G++D A  +F   + +
Sbjct: 161 AAGAYADSG---TGRQIHALAVKCG-WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK 216

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           + VSWN ++S  ++      A+M   +M   G +    + +SV  + + L  L+ GK +H
Sbjct: 217 NGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVH 276

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A+ +++   +  +FVG+ L+DMY     +   R+VFD + +K +  WN+M+T + Q    
Sbjct: 277 AHVIKSRQKL-TAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLG 335

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           +EA+  F +M + +G++ N  T   ++ AC
Sbjct: 336 KEAVSHFEEMRK-SGVYLNQITFLCILTAC 364



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 147/271 (54%), Gaps = 10/271 (3%)

Query: 38  QTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           Q R K+  SW   +   A+++   EAI     M +   +P+ F F ++LKA     D   
Sbjct: 111 QMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGT 170

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIAT 154
           G+QIHA  VK G+    V V + L++MY +CG  DM     VFD++  K+ VSWN++I+ 
Sbjct: 171 GRQIHALAVKCGWH-EDVYVGSALLDMYARCGKMDM--ATAVFDKLDSKNGVSWNALISG 227

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
             R G  + AL  F  ML +  E + FT  SV    S+++R   L  G+ VH + ++  +
Sbjct: 228 FARKGDGESALMTFAEMLRNGFEATHFTYSSV---FSSIARLGALEQGKWVHAHVIKSRQ 284

Query: 215 WNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             T F+ N L+ MYAK G + DA+ +F   +++DLV+WN+++++ +Q     EAV    +
Sbjct: 285 KLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           M   G+  + ++   +L ACSH  ++  GK 
Sbjct: 345 MRKSGVYLNQITFLCILTACSHGGLVKEGKR 375



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 22/248 (8%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P      S + AC +S+   D   IH H        D ++ N+L+ MY +   +  ++
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  +D VSW ++I GY       +A+ LL  M                    R K
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKG-----------------RFK 149

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN  T  ++L   GA +    G++IHA A++     DV VGSAL+DMYA+CG ++ A  V
Sbjct: 150 PNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAV 209

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +N ++WN +I  +   G+G+  L     M+  G      +    T+ ++F++ +
Sbjct: 210 FDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNG-----FEATHFTYSSVFSSIA 264

Query: 622 HSGMVSEG 629
             G + +G
Sbjct: 265 RLGALEQG 272


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/663 (38%), Positives = 381/663 (57%), Gaps = 26/663 (3%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N L+  Y K G V  A+ +F     R +V+WN++++S  +N +  EA+   ++M   GI 
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  + +SV  A S L ++  G+  H  ++   + + N FVGSALVDMY    ++   R 
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           V D +  K + L+ A+I GY  +  D E+L +F  M +  G+  N  T+SSV+  C   E
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTK-KGIEANEYTLSSVLVCCGNLE 292

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                  IHG  +K GL      Q +L+ MY R G ++ S  +F      + V+W ++I 
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G    G+   AL+  R+M        R+++           PNS TL +VL  C +L+ L
Sbjct: 353 GLVQNGREEIALLKFRQML-------RSSI----------TPNSFTLSSVLRACSSLAML 395

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
            +GK+IHA  ++  L  D  VG+AL+D Y KCG    AR VF+ +   +V++ N +I +Y
Sbjct: 396 EQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSY 455

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             +G G E L+L   M   G     ++PN VT++ + +AC+++G++ EG  +F   ++  
Sbjct: 456 AQNGFGHEALQLFSGMKDTG-----LEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG 510

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            IE + DHYAC+VDLLGRAG++++A  LIN +         W +LL ACRIH +VE+ + 
Sbjct: 511 NIELTKDHYACMVDLLGRAGRLKEAEMLINQV--NISDVVIWRTLLSACRIHGDVEMAKR 568

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
               +  L P+    +VLLSN+Y+S   W K ++++  M+EM ++K P  SW++   EIH
Sbjct: 569 VMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIH 628

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F+AGD SH     +   LE L E++++ GYVPDT  VL +++EE+K   L  HSEKLA+
Sbjct: 629 TFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAV 688

Query: 821 AFGILNTP-PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           AF +  +    TTIR+ KNLRVC DCH   KF+SKI  R+II RDV+RFHHF+NG CSCG
Sbjct: 689 AFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCG 748

Query: 880 DYW 882
           DYW
Sbjct: 749 DYW 751



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 147/442 (33%), Positives = 231/442 (52%), Gaps = 15/442 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S  R+ + +EAI  Y  M    I PD F F +V KA + +  +  G++ H   
Sbjct: 143 AWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQS 202

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G G+S+V V + LV+MY K G  M D   V D++  KD V + ++I      G+   
Sbjct: 203 VVLGVGVSNVFVGSALVDMYAKFGK-MRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGE 261

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +L+ FR M    +E + +TL SV + C NL   + L  GR +HG  ++ G E       +
Sbjct: 262 SLQVFRNMTKKGIEANEYTLSSVLVCCGNL---EDLTSGRLIHGLIVKAGLESAVASQTS 318

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY + G VDD+  +FK F + + V+W +++  L QN +   A++  RQM    I P+
Sbjct: 319 LLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPN 378

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +++SVL ACS L ML+ GK+IHA  ++  + ID  +VG+AL+D Y  C   E  R VF
Sbjct: 379 SFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK-YVGAALIDFYGKCGSTEIARSVF 437

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + +  +   N+MI  Y QN +  EAL LF  M++  GL PN  T   V+ AC  +   
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD-TGLEPNNVTWLGVLSACNNAGLL 496

Query: 403 PDKEGIHGHAIKLG---LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            +   I   A   G   L +D Y    ++D+  R GR++ ++ + + + + D V W T++
Sbjct: 497 EEGCHIFSSARNSGNIELTKDHYA--CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLL 554

Query: 460 TGYTICGQHGDALMLLREMQNM 481
           +    C  HGD  M  R M  +
Sbjct: 555 SA---CRIHGDVEMAKRVMNRV 573



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 267/513 (52%), Gaps = 37/513 (7%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + ++++   GI+ ++   +I +H +K G+  S   + N L++ Y KCGS ++   KVFD 
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHS---LGNKLIDAYLKCGSVVY-ARKVFDE 135

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +  V+WNSMIA+  R G+   A++ ++ M+   + P  FT  SV  A S+L     +
Sbjct: 136 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGL---V 192

Query: 200 RLGRQVHGNS--LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             G++ HG S  L VG  N F+ +AL+ MYAK G++ DA+ +      +D+V +  ++  
Sbjct: 193 HEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVG 252

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            S + +  E++   R M  +GI+ +  +++SVL  C +LE L +G+ IH   ++  +   
Sbjct: 253 YSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGL--- 309

Query: 318 NSFVGS--ALVDMYCNCREVECGRRVF-DFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            S V S  +L+ MY  C  V+   +VF  FI+  ++  W ++I G  QN  +E AL+ F 
Sbjct: 310 ESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVT-WTSVIVGLVQNGREEIALLKFR 368

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M   + + PN+ T+SSV+ AC         + IH   +K GL  D+YV  AL+D Y + 
Sbjct: 369 QMLR-SSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC 427

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G  EI++++F+ +   D VS N+MI  Y   G   +AL L   M++   E          
Sbjct: 428 GSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLE---------- 477

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKC 552
                  PN++T + VL  C     L +G  I + A RN    ++     + +VD+  + 
Sbjct: 478 -------PNNVTWLGVLSACNNAGLLEEGCHIFSSA-RNSGNIELTKDHYACMVDLLGRA 529

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           G L  A  + + + + +V+ W  ++ A  +HG+
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGD 562



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 87/158 (55%), Gaps = 9/158 (5%)

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +++  C  + ++    +I ++A++      +  G+ L+D Y KCG + +AR+VFD +P R
Sbjct: 82  SLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHR 139

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           +++ WN +I +Y  +G  +E +++ + MV +G     + P+E TF ++F A S  G+V E
Sbjct: 140 HIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG-----ILPDEFTFSSVFKAFSDLGLVHE 194

Query: 629 GMDLFYKMKDDYGIEPSPDHY-ACVVDLLGRAGKVEDA 665
           G    +      G+  S     + +VD+  + GK+ DA
Sbjct: 195 GQRA-HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA 231


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/885 (31%), Positives = 446/885 (50%), Gaps = 106/885 (11%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           I  L+  K +HA ++K     +    A  L++ Y   G D W    VF     ++ + WN
Sbjct: 43  ITSLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFG-DFWSAAMVFYVGLPRNYLKWN 101

Query: 150 SMIATL-CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           S +       G   + LE F+ +    V   S  + SVAL     +R   + LG ++HG 
Sbjct: 102 SFVEEFKSSAGSLHIVLEVFKELHGKGVVFDS-EVYSVAL--KTCTRVMDIWLGMEIHGC 158

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            ++ G + + ++  ALM  Y +   ++ A  +F    + + + WN  +    Q++K  + 
Sbjct: 159 LIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKG 218

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           V   R+M    +K +  +I  VL AC  +  L+  K+IH Y  R  +  D S   + L+ 
Sbjct: 219 VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLC-NPLIS 277

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME---------- 377
           MY    ++E  RRVFD + ++  + WN+MI+ Y    +  +A  LF ++E          
Sbjct: 278 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 337

Query: 378 ------------------------EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
                                   +  G  PN+++M+SV+ A          +  HG+ +
Sbjct: 338 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL 397

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR----------------------- 450
           + G   D YV  +L+DMY +   +  ++ +FD+M+ R                       
Sbjct: 398 RNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALR 457

Query: 451 ------------DTVSWNTMITGYTICGQHGDALMLLREMQNM----------------- 481
                       D V+WN MI+GY + G   +AL +L + +++                 
Sbjct: 458 LLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSS 517

Query: 482 EEEKNRNNVYDL----DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           +   NR+++        E V+   PNS ++  +L  C +LS L KGKEIH  +IRN    
Sbjct: 518 QAGNNRDSLKFFAQMQQEGVM---PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIE 574

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           DV V +AL+DMY+K   L  A +VF  +  + + +WN +IM + + G G+E + +   M 
Sbjct: 575 DVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQ 634

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G     V P+ +TF AL +AC +SG++ EG   F  M  DY I P  +HY C+VDLLG
Sbjct: 635 KVG-----VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 689

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG +++A+ LI+ MP + D A  W +LLG+CRIH+N++  E AA+NLF LEP+ +++Y+
Sbjct: 690 RAGYLDEAWDLIHTMPLKPD-ATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYI 748

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           L+ N+YS    W+    +R+ M   GVR     SWI+    +H F + +  H  + +++ 
Sbjct: 749 LMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYF 808

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            L  L   M+K GYVPD +CV  N++E EK+ +L  H+EKLAI +G++    G  IRV K
Sbjct: 809 ELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIK 868

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           N R+C+DCH A K+IS +++RE+ LRD  RFHHF+ G CSC D+W
Sbjct: 869 NTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/798 (34%), Positives = 445/798 (55%), Gaps = 44/798 (5%)

Query: 55  SNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           +   R A+ +   M R  I+P D+  F ++LK+    +D  LGK +HA ++++     SV
Sbjct: 39  AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98

Query: 114 TVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            + N+L+++Y K G  +   DV++   R  ++D VSW++M+A     G+   A++ F   
Sbjct: 99  -LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK 229
           L   + P+ +   +V  ACSN    D + +GR   G  ++ G  E +  +  +L+ M+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSN---SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 230 -LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                ++A  +F    + ++V+W  +++   Q     EA+ F   M L G + D  +++S
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFI 345
           V  AC+ LE L  GK++H++A+R+ ++ D   V  +LVDMY  C     V+  R+VFD +
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRM 331

Query: 346 SDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
            D  +  W A+ITGY +N     EA+ LF +M     + PN  T SS   AC        
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + + G A K GL  +  V N+++ M+ +  R+E ++  F+ +  ++ VS+NT + G   
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
                 A  LL E+   E                    ++ T  ++L G   + ++ KG+
Sbjct: 452 NLNFEQAFKLLSEITEREL-----------------GVSAFTFASLLSGVANVGSIRKGE 494

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IH+  ++  L+ +  V +AL+ MY+KCG ++ A RVF+ M  RNVI+W  +I  +  HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
               VLE    M+ EG     VKPNEVT++A+ +ACSH G+VSEG   F  M +D+ I+P
Sbjct: 555 FAIRVLETFNQMIEEG-----VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HYAC+VDLL RAG + DA++ IN MP + D    W + LGACR+H N E+G++AA+ 
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD-VLVWRTFLGACRVHSNTELGKLAARK 668

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +  L+P+  + Y+ LSNIY+ A  W+++ ++R+KMKE  + KE GCSWIE GD+IHKF  
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET----LLCGHSEKLAI 820
           GD +H  + Q++  L+ L   +++ GYVPDT  VLH + EE  E     LL  HSEK+A+
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAV 788

Query: 821 AFGILNTPPGTTIRVAKN 838
           AFG+++T     +++ + 
Sbjct: 789 AFGLISTSKSRPLKMIQT 806



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 296/603 (49%), Gaps = 38/603 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +  +AI  ++E     + P+++ + AV++A +    + +G+     +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S V V  +L++M+ K  +   + YKVFD+++E + V+W  MI    + G    
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M+ S  E   FTL SV  AC+ L   + L LG+Q+H  ++R G  +  +  +L
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAEL---ENLSLGKQLHSWAIRSGLVDD-VECSL 308

Query: 224 MAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-LEAVMFLRQMALRG- 278
           + MYAK    G VDD + +F   ED  ++SW  +++   +N     EA+    +M  +G 
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+  + +S   AC +L     GK++   A +   L  NS V ++++ M+     +E  
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDA 427

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +R F+ +S+K +  +N  + G  +N   E+A  L  ++ E   L  +A T +S++     
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVAN 486

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +    E IH   +KLGL  ++ V NAL+ MYS+ G I+ +  +F+ ME R+ +SW +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ITG+    +HG A+ +L     M EE                KPN +T + +L  C  + 
Sbjct: 547 ITGF---AKHGFAIRVLETFNQMIEEG--------------VKPNEVTYVAILSACSHVG 589

Query: 519 ALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            +++G +  ++    + +   +   + +VD+  + G L  A    + MP + +V+ W   
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIALFAACSHSGMVSEGMDLFYK 635
           + A  +H   +     L  + A   +  E+ PNE   +I L    + +G   E  ++  K
Sbjct: 650 LGACRVHSNTE-----LGKLAAR--KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702

Query: 636 MKD 638
           MK+
Sbjct: 703 MKE 705


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/606 (39%), Positives = 367/606 (60%), Gaps = 27/606 (4%)

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P   +   ++ +C+    L  G ++H   L +     + F+ + L++MY     ++   +
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHR-CLVDSGFDQDPFLATKLINMYYELGSIDRALK 134

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VFD   ++ I +WNA+        + +E L L+I+M  + G   +  T + V+ ACV SE
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWI-GTPSDRFTYTYVLKACVVSE 193

Query: 401 --AFPDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               P ++G  IH H ++ G   + +V   L+D+Y++ G +  + ++F  M  ++ VSW+
Sbjct: 194 LSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWS 253

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI  +        AL L + M  M E  N               PNS+T++ +L  C  
Sbjct: 254 AMIACFAKNEMPMKALELFQLM--MFEACN-------------SVPNSVTMVNMLQACAG 298

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L+AL +GK IH Y +R  L + + V +AL+ MY +CG +   +RVFD M  R+V++WN +
Sbjct: 299 LAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSL 358

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  YGMHG G++ +++ +NM+ +G     V P+ ++FI +  ACSH+G+V EG  LF  M
Sbjct: 359 ISIYGMHGFGKKAIQIFENMIHQG-----VSPSYISFITVLGACSHAGLVEEGKILFESM 413

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              Y I P  +HYAC+VDLLGRA ++ +A +LI  M  E      W SLLG+CRIH NVE
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFE-PGPTVWGSLLGSCRIHCNVE 472

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + E A+  LF LEP  A +YVLL++IY+ A+LW +A  V K ++  G++K PGCSWIE  
Sbjct: 473 LAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVK 532

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
            +++ F++ D  + Q E++H  L  LS  M+ +GYVP T+ VL++++EEEKE ++ GHSE
Sbjct: 533 RKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSE 592

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+AFG++NT  G TIR+ KNLR+C DCH  TKFISK  +REI++RDV RFHHF++G C
Sbjct: 593 KLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVC 652

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 653 SCGDYW 658



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 177/382 (46%), Gaps = 31/382 (8%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N +I +LC+ G    AL     +L     P+  T   +  +C+   +++ L  G  VH  
Sbjct: 51  NQLIQSLCKGGNLKQALH----LLCCEPNPTQQTFEHLIYSCA---QKNSLSYGLDVHRC 103

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            +  G + + F+   L+ MY +LG +D A  +F    +R +  WN +  +L+      E 
Sbjct: 104 LVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKEL 163

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEM----LDTGKEIHAYALRNDILIDNSFVGS 323
           +    QM   G   D  +   VL AC   E+    L  GKEIHA+ LR+     N  V +
Sbjct: 164 LDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYE-ANIHVMT 222

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF-IKMEEVAGL 382
            L+D+Y     V     VF  +  K    W+AMI  + +NE   +AL LF + M E    
Sbjct: 223 TLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNS 282

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN+ TM +++ AC    A    + IHG+ ++  L     V NAL+ MY R G + + + 
Sbjct: 283 VPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQR 342

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD+M+ RD VSWN++I+ Y   G HG     ++  +NM  +                 P
Sbjct: 343 VFDNMKKRDVVSWNSLISIY---GMHGFGKKAIQIFENMIHQG--------------VSP 385

Query: 503 NSITLMTVLPGCGALSALAKGK 524
           + I+ +TVL  C     + +GK
Sbjct: 386 SYISFITVLGACSHAGLVEEGK 407



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 189/390 (48%), Gaps = 31/390 (7%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P    F  ++ + A    LS G  +H  +V  G+      +A  L+NMY + GS +    
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPF-LATKLINMYYELGS-IDRAL 133

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SN 192
           KVFD   E+    WN++   L   G     L+ +  M +       FT   V  AC  S 
Sbjct: 134 KVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSE 193

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           LS    LR G+++H + LR G E N  +M  L+ +YAK G V  A ++F +   ++ VSW
Sbjct: 194 LSVCP-LRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIK--PDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           + +++  ++N+  ++A+   + M        P+ V++ ++L AC+ L  L+ GK IH Y 
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYI 312

Query: 310 LRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           LR    +D+   V +AL+ MY  C EV  G+RVFD +  + +  WN++I+ YG + + ++
Sbjct: 313 LRRQ--LDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKK 370

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRS----------EAFPDKEGIHGHAIKLGLG 418
           A+ +F  M    G+ P+  +  +V+ AC  +          E+   K  IH        G
Sbjct: 371 AIQIFENMIH-QGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHP-------G 422

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            + Y    ++D+  R  R+  +  + +DM 
Sbjct: 423 MEHYA--CMVDLLGRANRLGEAIKLIEDMH 450



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 149/275 (54%), Gaps = 14/275 (5%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL- 95
           ++ R    W    R+ A     +E +  YI+M       D F +  VLKA   + +LS+ 
Sbjct: 139 TRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACV-VSELSVC 197

Query: 96  ----GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
               GK+IHAH++++GY  +++ V  TL+++Y K GS  +    VF  +  K+ VSW++M
Sbjct: 198 PLRKGKEIHAHILRHGYE-ANIHVMTTLLDVYAKFGSVSY-ANSVFCAMPTKNFVSWSAM 255

Query: 152 IATLCRFGKWDLALEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           IA   +      ALE F++M++   N  P+S T+V++  AC+ L+    L  G+ +HG  
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLA---ALEQGKLIHGYI 312

Query: 210 LRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           LR    +   ++NAL+ MY + G V   + +F + + RD+VSWN+++S    +    +A+
Sbjct: 313 LRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAI 372

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
                M  +G+ P  +S  +VL ACSH  +++ GK
Sbjct: 373 QIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 13/194 (6%)

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           P P   T   ++  C   ++L+ G ++H   + +    D  + + L++MY + G ++ A 
Sbjct: 74  PNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRAL 133

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +VFD    R +  WN +  A  M G G+E+L+L   M   G+       +  T+  +  A
Sbjct: 134 KVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGT-----PSDRFTYTYVLKA 188

Query: 620 CSHSGM----VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           C  S +    + +G ++   +   +G E +      ++D+  + G V  A  +   MP +
Sbjct: 189 CVVSELSVCPLRKGKEIHAHIL-RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK 247

Query: 676 FDKAGAWSSLLGAC 689
                +WS+++ AC
Sbjct: 248 --NFVSWSAMI-AC 258


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/700 (35%), Positives = 389/700 (55%), Gaps = 58/700 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  NAL++  A    +DD  +LF S   RD VS+N +++  S       AV     + 
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 276 LRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN-- 331
             G  ++P  +++++++ A S L     G++ H   LR    + N+FVGS LV MY    
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGV-NAFVGSPLVGMYAKMG 189

Query: 332 -----------------------------CREVECGRRVFDFISDKKIALWNAMITGYGQ 362
                                        C+ VE  RR+F+ ++D+    W  M+TG+ Q
Sbjct: 190 LIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ 249

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N  + +AL  F +M    G+  +  T  S++ AC    A    + IH + I+     + +
Sbjct: 250 NGLESQALNFFRRMR-FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+DMYS+   I+ ++T F  M  ++ +SW  +I GY   G   +A+ +  EMQ   
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQ--- 365

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
               R+ +           P+  TL +V+  C  L++L +G + H  A+ + L   + V 
Sbjct: 366 ----RDGI----------DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +ALV +Y KCG +  A R+FD M   + ++W  ++  Y   G  +E ++L + M+A+   
Sbjct: 412 NALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAK--- 468

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
             +VKP+ VTFI + +ACS +G V +G   F+ M+ D+GI P  DHY C++DL  R+G++
Sbjct: 469 --DVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRL 526

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A + I  MP   D  G W +LL ACR+  ++EIG+ AA+NL  ++P   + YVLL ++
Sbjct: 527 KEAEEFIKQMPMHPDAIG-WGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSM 585

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +++   W++   +R+ M++  V+KEPGCSWI++ +++H F A D SH  S+ ++  LE L
Sbjct: 586 HATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWL 645

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           + +M +EGY PD S VLH+V + +K  ++  HSEKLAIAFG++  P    IR+ KNLRVC
Sbjct: 646 NSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVC 705

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH ATK ISKI  R+I++RD  RFH F NG CSCGD+W
Sbjct: 706 VDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 209/437 (47%), Gaps = 50/437 (11%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
           S ++P      A++ A + + D +LG+Q H  +++ G+G+++  V + LV MY K G  +
Sbjct: 134 SSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAF-VGSPLVGMYAKMGL-I 191

Query: 131 WDVYKVFDR-------------------------------ITEKDQVSWNSMIATLCRFG 159
            D  +VFD                                +T++D ++W +M+    + G
Sbjct: 192 GDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG 251

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
               AL  FR M +  +    +T  S+  AC  LS    L  G+Q+H   +R   + N F
Sbjct: 252 LESQALNFFRRMRFQGIAIDQYTFGSILTACGALS---ALEQGKQIHAYIIRTHYDDNVF 308

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + +AL+ MY+K   +  A+T F+    ++++SW  ++    QN    EAV    +M   G
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I PD  ++ SV+ +C++L  L+ G + H  AL +  L+    V +ALV +Y  C  +E  
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSG-LMHYITVSNALVTLYGKCGSIEDA 427

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R+FD +       W A++TGY Q    +E + LF KM     + P+  T   V+ AC R
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM-LAKDVKPDGVTFIGVLSACSR 486

Query: 399 SEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
           +  F +K   + H+++   G     D Y    ++D+YSR GR++ ++     M +  D +
Sbjct: 487 A-GFVEKGCSYFHSMQKDHGIVPIDDHY--TCMIDLYSRSGRLKEAEEFIKQMPMHPDAI 543

Query: 454 SWNTMITGYTICGQHGD 470
            W T+++    C   GD
Sbjct: 544 GWGTLLSA---CRLRGD 557



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 12/290 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++    +A+  +  M    I  D + F ++L A   +  L  GKQIHA++
Sbjct: 239 TWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI 298

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y   +V V + LV+MY KC S +      F R++ K+ +SW ++I    + G  + 
Sbjct: 299 IRTHYD-DNVFVGSALVDMYSKCRS-IKPAETAFRRMSCKNIISWTALIVGYGQNGCSEE 356

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A+  F  M    ++P  FTL SV  +C+NL+    L  G Q H  +L  G  +   + NA
Sbjct: 357 AVRVFSEMQRDGIDPDDFTLGSVISSCANLA---SLEEGAQFHCLALVSGLMHYITVSNA 413

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++DA  LF      D VSW  +V+  +Q  +  E +    +M  + +KPD
Sbjct: 414 LVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPD 473

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRND---ILIDNSFVGSALVDMY 329
           GV+   VL ACS    ++ G   + ++++ D   + ID+ +  + ++D+Y
Sbjct: 474 GVTFIGVLSACSRAGFVEKGCS-YFHSMQKDHGIVPIDDHY--TCMIDLY 520



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 12/223 (5%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK   SW   +    ++    EA+  + EM R  I PD+F   +V+ + A +  L  G Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H   +  G  +  +TV+N LV +YGKCGS + D +++FD +   DQVSW +++    +F
Sbjct: 395 FHCLALVSGL-MHYITVSNALVTLYGKCGS-IEDAHRLFDEMLFHDQVSWTALVTGYAQF 452

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G+    ++ F  ML  +V+P   T + V  ACS    R G       + +S++       
Sbjct: 453 GRAKETIDLFEKMLAKDVKPDGVTFIGVLSACS----RAGFVEKGCSYFHSMQKDHGIVP 508

Query: 219 I---MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           I      ++ +Y++ GR+ +A+   K      D + W T++S+
Sbjct: 509 IDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/805 (34%), Positives = 440/805 (54%), Gaps = 46/805 (5%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
           ++DL    Q+ A    Y       TV+ NT+++ + K G D+     +FD + ++  V+W
Sbjct: 55  VEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG-DVSSARDLFDAMPDRTVVTW 113

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
             ++    R   +D A + FR M  S+    P   T  ++   C++   ++ +    QVH
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG---QVH 170

Query: 207 GNSLRVG-EWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
             ++++G + N F  + N L+  Y ++ R+D A  LF+   ++D V++NT+++   ++  
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGL 230

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
           + E++    +M   G +P   + + VL A   L     G+++HA ++      D S VG+
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS-VGN 289

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL- 382
            ++D Y     V   R +FD + +     +N +I+ Y Q +  E +L  F +M+   G  
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ-CMGFD 348

Query: 383 ---WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
              +P AT +S  + A + S     +  +H  A+        +V N+L+DMY++    E 
Sbjct: 349 RRNFPFATMLS--IAANLSSLQMGRQ--LHCQALLATADSILHVGNSLVDMYAKCEMFEE 404

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ IF  +  R TVSW  +I+GY   G HG  L L  +M+        +N+         
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG-------SNL--------- 448

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            + +  T  TVL    + ++L  GK++HA+ IR+    +V  GS LVDMYAKCG +  A 
Sbjct: 449 -RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +VF+ MP RN ++WN +I A+  +G+G+  +     M+  G     ++P+ V+ + +  A
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG-----LQPDSVSILGVLTA 562

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH G V +G + F  M   YGI P   HYAC++DLLGR G+  +A +L++ MP E D+ 
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRK 737
             WSS+L ACRIH+N  + E AA+ LF +E   D A+ YV +SNIY++A  W+K  DV+K
Sbjct: 623 -MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA-YVSMSNIYAAAGEWEKVRDVKK 680

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            M+E G++K P  SW+E   +IH F + D +H   +++   +  L+  + +EGY PDTS 
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSS 740

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           V+ +V+E+ K   L  HSE+LA+AF +++TP G  I V KNLR C DCH A K ISKI  
Sbjct: 741 VVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVK 800

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI +RD  RFHHF  G CSCGDYW
Sbjct: 801 REITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 223/438 (50%), Gaps = 22/438 (5%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + E+I  +++M +S  QP +F F  VLKAV G+ D +LG+Q+HA  V  G+     +V N
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDASVGN 289

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            +++ Y K    + +   +FD + E D VS+N +I++  +  +++ +L  FR M     +
Sbjct: 290 QILDFYSK-HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNS-LRVGEWNTFIMNALMAMYAKLGRVDDA 236
             +F   ++    +NLS    L++GRQ+H  + L   +    + N+L+ MYAK    ++A
Sbjct: 349 RRNFPFATMLSIAANLS---SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEA 405

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +FKS   R  VSW  ++S   Q       +    +M    ++ D  + A+VL A +  
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  GK++HA+ +R+  L +N F GS LVDMY  C  ++   +VF+ + D+    WNA+
Sbjct: 466 ASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-------SEAFPDKEGIH 409
           I+ +  N   E A+  F KM E +GL P++ ++  V+ AC         +E F     I+
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIE-SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQH 468
           G   K    +  Y    ++D+  R GR   ++ + D+M    D + W++++    I    
Sbjct: 584 GITPK----KKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637

Query: 469 GDALMLLREMQNMEEEKN 486
             A     ++ +ME+ ++
Sbjct: 638 SLAERAAEKLFSMEKLRD 655



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           + S ++++Q+  ++  + EM        NF F  +L   A +  L +G+Q+H   +    
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LAT 381

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
             S + V N+LV+MY KC  +M++  + +F  + ++  VSW ++I+   + G     L+ 
Sbjct: 382 ADSILHVGNSLVDMYAKC--EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAM 226
           F  M  SN+     T  +V  A ++ +    L LG+Q+H   +R G   N F  + L+ M
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFA---SLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK G + DA  +F+   DR+ VSWN ++S+ + N     A+    +M   G++PD VSI
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556

Query: 287 ASVLPACSHLEMLDTGKE 304
             VL ACSH   ++ G E
Sbjct: 557 LGVLTACSHCGFVEQGTE 574



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)

Query: 382 LWPNATTMSSVVPACVRS------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           L+ N+  + S   A +R         F D   +    IK G   D    N +++   R G
Sbjct: 3   LYCNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRG 62

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN--------MEEEKNR 487
           ++  ++ ++D+M  ++TVS NTMI+G+   G    A  L   M +        +     R
Sbjct: 63  QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122

Query: 488 NNVYDLDETVLRPK--------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD- 538
           N+ +D    + R          P+ +T  T+LPGC          ++HA+A++    T+ 
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182

Query: 539 -VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
            + V + L+  Y +   L+ A  +F+ +P ++ +T+N +I  Y   G   E + L   M 
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242

Query: 598 AEGSRGGEVKPNEVTFIALFAA 619
             G      +P++ TF  +  A
Sbjct: 243 QSGH-----QPSDFTFSGVLKA 259


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/715 (35%), Positives = 396/715 (55%), Gaps = 61/715 (8%)

Query: 205 VHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSLSQ 260
            H   ++ G  NT + ++ L+ +       D    A ++F++ ++ +L+ WNT++  L+ 
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL---------- 310
           +   +  +    +M   G  P+  +   +L +C+  +  + G++IHA  +          
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 311 ---------RNDILIDNSFV-----------GSALVDMYCNCREVECGRRVFDFISDKKI 350
                    RN  L D   V            +AL+  Y +  +V   R+VFD I+++ +
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAMITGY +N   EEAL LF +M     + P+  T+ SV+ AC +S +      IH 
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRT-NVRPDEGTLVSVLSACAQSGSIELGREIHT 239

Query: 411 HAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
                 G G    + NA + +YS+ G +EI+  +F+ +  +D VSWNT+I GYT    + 
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL+L +EM    E                  PN +T+++VLP C  L A+  G+ IH Y
Sbjct: 300 EALLLFQEMLRSGE-----------------SPNDVTMLSVLPACAHLGAIDIGRWIHVY 342

Query: 530 AIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
             + +  +     + ++L+DMYAKCG +  A +VF+ M  +++ +WN +I  + MHG   
Sbjct: 343 IDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRAN 402

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
              +L   M   G     ++P+++T + L +ACSHSG++  G  +F  +  DY I P  +
Sbjct: 403 AAFDLFSRMRKNG-----IEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE 457

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY C++DLLG AG  ++A ++I+MMP E D    W SLL AC++H N+E+ E  AQ L  
Sbjct: 458 HYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGV-IWCSLLKACKMHGNLELAESFAQKLME 516

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           +EP+ +  YVLLSNIY++A  W+    +R+ +   G++K PGCS IE    +H+F+ GD 
Sbjct: 517 IEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDK 576

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
            H QS +++  LE +   + + G+VPDTS VL  + EE KE  L  HSEKLAIAFG+++T
Sbjct: 577 LHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 636

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PGT + V KNLRVC +CH+ATK ISKI  REI+ RD  RFHHF++G CSC DYW
Sbjct: 637 KPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 199/395 (50%), Gaps = 52/395 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A S+     +  Y+ M      P+ + FP +LK+ A  +    G+QIHA V+
Sbjct: 51  WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110

Query: 105 KYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVY 134
           K G  L       +L++MY + G                               D+    
Sbjct: 111 KLGCELDRYA-HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSAR 169

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVFD ITE+D VSWN+MI        ++ ALE F+ M+ +NV P   TLVSV  AC   +
Sbjct: 170 KVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC---A 226

Query: 195 RRDGLRLGRQVH---------GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           +   + LGR++H         G+SL+       I+NA + +Y+K G V+ A  LF+    
Sbjct: 227 QSGSIELGREIHTLVDDHHGFGSSLK-------IVNAFIGLYSKCGDVEIASGLFEGLSC 279

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +D+VSWNT++   +  + + EA++  ++M   G  P+ V++ SVLPAC+HL  +D G+ I
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339

Query: 306 HAYA-LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           H Y   R   + + S + ++L+DMY  C ++E   +VF+ +  K ++ WNAMI G+  + 
Sbjct: 340 HVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHG 399

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
               A  LF +M +  G+ P+  T+  ++ AC  S
Sbjct: 400 RANAAFDLFSRMRK-NGIEPDDITLVGLLSACSHS 433



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 228/490 (46%), Gaps = 67/490 (13%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF+   E + + WN+M+  L         LE +  M+     P+++T   +  +C   ++
Sbjct: 39  VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSC---AK 95

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-------------- 240
                 GRQ+H   +++G E + +   +L++MYA+ GR++DA+ +F              
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 241 --------------KSFE---DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                         K F+   +RD+VSWN +++   +N  + EA+   ++M    ++PD 
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215

Query: 284 VSIASVLPACSHLEMLDTGKEIHA-----YALRNDILIDNSFVGSALVDMYCNCREVECG 338
            ++ SVL AC+    ++ G+EIH      +   + + I N+F+G     +Y  C +VE  
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIG-----LYSKCGDVEIA 270

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             +F+ +S K +  WN +I GY      +EAL+LF +M   +G  PN  TM SV+PAC  
Sbjct: 271 SGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR-SGESPNDVTMLSVLPACAH 329

Query: 399 SEAFPDKEGIHGHAIKL--GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             A      IH +  K   G+     ++ +L+DMY++ G IE +  +F+ M  +   SWN
Sbjct: 330 LGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI G+ + G+   A  L   M+       +N +          +P+ ITL+ +L  C  
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMR-------KNGI----------EPDDITLVGLLSACSH 432

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
              L  G+ I     ++   T  +     ++D+    G    A  +  +MP+  + + W 
Sbjct: 433 SGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWC 492

Query: 575 VIIMAYGMHG 584
            ++ A  MHG
Sbjct: 493 SLLKACKMHG 502



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 9/266 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  + EA+  + EM R++++PD     +VL A A    + LG++IH  V
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 104 V-KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
              +G+G SS+ + N  + +Y KCG D+     +F+ ++ KD VSWN++I        + 
Sbjct: 242 DDHHGFG-SSLKIVNAFIGLYSKCG-DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFI 219
            AL  F+ ML S   P+  T++SV  AC++L   D   +GR +H      L+     + +
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID---IGRWIHVYIDKRLKGVTNGSAL 356

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             +L+ MYAK G ++ A  +F S   + L SWN ++   + + +   A     +M   GI
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGI 416

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEI 305
           +PD +++  +L ACSH  +LD G+ I
Sbjct: 417 EPDDITLVGLLSACSHSGLLDLGRHI 442


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/754 (34%), Positives = 420/754 (55%), Gaps = 44/754 (5%)

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M +   +F+++   D   WN +I      G +  A++ +  M    +   +FT   V  A
Sbjct: 74  MGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKA 133

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C  L     L +G++VHG  +++G + + ++ N L+ MY K+G ++ A+ +F     RDL
Sbjct: 134 CGELL---ALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDL 190

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           VSWN++VS    +   L ++M  ++M   G K D   + S L ACS    L +G EIH  
Sbjct: 191 VSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQ 250

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            +R+++ +D   V ++L+DMY  C +V+   RVF+ I  K I  WNAMI G         
Sbjct: 251 VIRSELELD-IMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG--------- 300

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
                  M+E   + P+  TM +++P+C +S A  + + IHG AI+        ++ AL+
Sbjct: 301 -------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALV 353

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY + G +++++ +F+ M  ++ VSWNTM+  Y    Q+ +AL + + +          
Sbjct: 354 DMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHI---------- 403

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
               L+E +   KP++IT+ +VLP    L++ ++GK+IH+Y ++  L ++  + +A+V M
Sbjct: 404 ----LNEPL---KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYM 456

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKCG L  AR  FD M  ++V++WN +IMAY +HG G+  ++    M     RG   KP
Sbjct: 457 YAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEM-----RGKGFKP 511

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N  TF++L  ACS SG++ EG   F  MK +YGI+P  +HY C++DLLGR G +++A   
Sbjct: 512 NGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCF 571

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP     A  W SLL A R H +V + E+AA+++  L+ D    YVLLSN+Y+ A  
Sbjct: 572 IEEMPL-VPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGR 630

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W+    ++  MKE G+ K  GCS ++       F+  D SH  +  ++  L+ L +++ +
Sbjct: 631 WEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGE 690

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
           + Y+   +        +++      HS KLAI FG+++T  G  + V KN R+C+DCH+A
Sbjct: 691 DIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRA 750

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K IS++  REI++ D + FHHF++G CSC DYW
Sbjct: 751 AKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 285/582 (48%), Gaps = 59/582 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R    +  F+EAI  Y  M    I+ DNF FP V+KA   +  L +G+++H  ++
Sbjct: 92  WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+ L  V V N L++MY K G  +    KVFD +  +D VSWNSM++     G    +
Sbjct: 152 KIGFDL-DVYVCNFLIDMYLKIGF-IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSS 209

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L  F+ ML    +   F ++S   AC   S    LR G ++H   +R   E +  +  +L
Sbjct: 210 LMCFKEMLRLGNKADRFGMISALGAC---SIEHCLRSGMEIHCQVIRSELELDIMVQTSL 266

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G+VD A+ +F     +++V+WN ++  + ++DK +               PD 
Sbjct: 267 IDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVI---------------PDV 311

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           +++ ++LP+CS    L  GK IH +A+R  + +    + +ALVDMY  C E++    VF+
Sbjct: 312 ITMINLLPSCSQSGALLEGKSIHGFAIRK-MFLPYLVLETALVDMYGKCGELKLAEHVFN 370

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +++K +  WN M+  Y QNE  +EAL +F  +     L P+A T++SV+PA     +  
Sbjct: 371 QMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN-EPLKPDAITIASVLPAVAELASRS 429

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           + + IH + +KLGLG + ++ NA++ MY++ G ++ ++  FD M  +D VSWNTMI  Y 
Sbjct: 430 EGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYA 489

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           I G    ++    EM        R   +         KPN  T +++L  C     + +G
Sbjct: 490 IHGFGRTSIQFFSEM--------RGKGF---------KPNGSTFVSLLTACSISGLIDEG 532

Query: 524 -KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYG 581
               ++  +   +   +     ++D+  + G L+ A+   + MP V     W  ++ A  
Sbjct: 533 WGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASR 592

Query: 582 MHGE-------GQEVLE----------LLKNMVAEGSRGGEV 606
            H +        + +L           LL NM AE  R  +V
Sbjct: 593 NHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDV 634



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 44/467 (9%)

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           + + G + +A  +F+     D   WN I+   + N  F EA+ F  +M   GI+ D  + 
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
             V+ AC  L  L  G+++H   ++    +D  +V + L+DMY     +E   +VFD + 
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLD-VYVCNFLIDMYLKIGFIELAEKVFDEMP 186

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + +  WN+M++GY  +     +LM F +M  + G   +   M S + AC          
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRL-GNKADRFGMISALGACSIEHCLRSGM 245

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH   I+  L  D  VQ +L+DMY + G+++ ++ +F+ +  ++ V+WN MI G     
Sbjct: 246 EIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG----- 300

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
                         M+E          D+ V+   P+ IT++ +LP C    AL +GK I
Sbjct: 301 --------------MQE----------DDKVI---PDVITMINLLPSCSQSGALLEGKSI 333

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H +AIR M    +V+ +ALVDMY KCG L  A  VF+ M  +N+++WN ++ AY  + + 
Sbjct: 334 HGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQY 393

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS 645
           +E L++ ++++ E      +KP+ +T  ++  A +     SEG  +  Y MK   G+  +
Sbjct: 394 KEALKMFQHILNE-----PLKPDAITIASVLPAVAELASRSEGKQIHSYIMK--LGLGSN 446

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
                 +V +  + G ++ A +  + M  +     +W++++ A  IH
Sbjct: 447 TFISNAIVYMYAKCGDLQTAREFFDGMVCK--DVVSWNTMIMAYAIH 491



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  ++ Q++EA+  +  +    ++PD     +VL AVA +   S GKQIH+++
Sbjct: 379 SWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYI 438

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G G S+  ++N +V MY KCG D+    + FD +  KD VSWN+MI      G    
Sbjct: 439 MKLGLG-SNTFISNAIVYMYAKCG-DLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRT 496

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           +++ F  M     +P+  T VS+  ACS
Sbjct: 497 SIQFFSEMRGKGFKPNGSTFVSLLTACS 524


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/759 (34%), Positives = 425/759 (55%), Gaps = 31/759 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +   R+ I  +++M R     D   F  VLK+ + ++D   G QIH   
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+    VT  + L++MY KC      + + F  + EK+ VSW+++IA   +      
Sbjct: 201 VKMGFDCDVVT-GSALLDMYAKCKKLDCSI-QFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            LE F+ M  + V  S  T  SV  +C+ LS    LRLG Q+HG++L+     +  I  A
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLS---ALRLGSQLHGHALKTDFGTDVVIGTA 315

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MY K   + DA+ LF S  + +L S+N I+   +++DK +EA+   R +   G+  D
Sbjct: 316 TLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLD 375

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            VS++    AC+ ++    G ++H  ++++ +   N  V +A++DMY  C  +     VF
Sbjct: 376 EVSLSGAFRACAVIKGDLEGLQVHGLSMKS-LCQSNICVANAILDMYGKCGALVEACLVF 434

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  +    WNA+I  + QN  +E+ L LF+ M + +G+ P+  T  SV+ AC   +A 
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ-SGMEPDEFTYGSVLKACAGWQAL 493

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH   IK  LG D +V  AL+DMYS+ G +E ++ + D +  +  VSWN +I+G+
Sbjct: 494 NCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGF 553

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           ++  Q  +A     +M  M  +                 P++ T  T+L  C  L  +  
Sbjct: 554 SLQKQSEEAQKTFSKMLEMGVD-----------------PDNFTYATILDTCANLVTVEL 596

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+  L +D  + S LVDMY+KCG +   + +F+  P R+ +TWN ++  Y  
Sbjct: 597 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E L++ + M  E      VKPN  TF+A+  AC H G+V +G+  F+ M  +YG+
Sbjct: 657 HGLGEEALKIFEYMQLE-----NVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL 711

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HY+CVVD++GR+G+V  A +LI  MP E D A  W +LL  C+IH NVE+ E AA
Sbjct: 712 DPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEAD-AVIWRTLLSICKIHGNVEVAEKAA 770

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            ++  LEP+ ++ YVLLSNIY++A +W++   +RK M+  G++KEPGCSWIE   E+H F
Sbjct: 771 YSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAF 830

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
           L GD +H +S++++  L+ L++ M+  GY+PDT  +L++
Sbjct: 831 LVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 869



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/640 (26%), Positives = 301/640 (47%), Gaps = 66/640 (10%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG------------ 127
           F  + +  +  + L  GKQ HA ++   +   +V V N L+ MY KC             
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFK-PTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 128 ------------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                              D+    K+FD + E+D VSWNS+I+     G     ++ F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M          T   V  +CS+L    G   G Q+HG ++++G + +    +AL+ MYA
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGG---GIQIHGLAVKMGFDCDVVTGSALLDMYA 220

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K  ++D +   F S  +++ VSW+ I++   QND     +   ++M   G+     + AS
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           V  +C+ L  L  G ++H +AL+ D   D   +G+A +DMY  C  +   +++F+ + + 
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTD-VVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  +NA+I GY +++   EAL +F ++ + +GL  +  ++S    AC   +   +   +
Sbjct: 340 NLQSYNAIIVGYARSDKGIEALGMF-RLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV 398

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG ++K     +  V NA++DMY + G +  +  +F++M  RD VSWN +I  +      
Sbjct: 399 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHE----- 453

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
                     QN  EEK  +    + ++ +  +P+  T  +VL  C    AL  G EIH 
Sbjct: 454 ----------QNGNEEKTLSLFVWMLQSGM--EPDEFTYGSVLKACAGWQALNCGMEIHN 501

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
             I++ L  D  VG AL+DMY+KCG +  A ++ D +  + V++WN II  + +  + +E
Sbjct: 502 RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEE 561

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
             +    M+  G     V P+  T+  +   C++   V  G  +  ++      E   D 
Sbjct: 562 AQKTFSKMLEMG-----VDPDNFTYATILDTCANLVTVELGKQIHAQIIKK---ELQSDA 613

Query: 649 Y--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           Y  + +VD+  + G ++D +QLI    P  D    W++++
Sbjct: 614 YISSTLVDMYSKCGNMQD-FQLIFEKAPNRDFV-TWNAMV 651



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 263/535 (49%), Gaps = 41/535 (7%)

Query: 166 EAFRMMLYSNVEPSSFT---LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           +A   M+ +  +P+ F    L+ + + CS+L     +  G         + + +T   NA
Sbjct: 63  QAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG---------MPQRDTVSWNA 113

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++  YA  G +  A+ LF +  +RD+VSWN+++S    N    + +    QM   G   D
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFD 173

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + A VL +CS LE    G +IH  A++     D    GSAL+DMY  C++++C  + F
Sbjct: 174 RTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCD-VVTGSALLDMYAKCKKLDCSIQFF 232

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             + +K    W+A+I G  QN+     L LF +M++ AG+  + +T +SV  +C    A 
Sbjct: 233 HSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQK-AGVGVSQSTFASVFRSCAGLSAL 291

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +HGHA+K   G D  +  A +DMY +   +  ++ +F+ +   +  S+N +I GY
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               +  +AL + R +Q         +   LDE         ++L      C  +    +
Sbjct: 352 ARSDKGIEALGMFRLLQ--------KSGLGLDE---------VSLSGAFRACAVIKGDLE 394

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G ++H  +++++  +++ V +A++DMY KCG L  A  VF+ M  R+ ++WN II A+  
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYG 641
           +G  ++ L L   M+  G     ++P+E T+ ++  AC+    ++ GM++  + +K   G
Sbjct: 455 NGNEEKTLSLFVWMLQSG-----MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLG 509

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           ++        ++D+  + G +E A +L + +  +     +W++++    + +  E
Sbjct: 510 LDSFVG--IALIDMYSKCGMMEKAEKLHDRLAEQ--TVVSWNAIISGFSLQKQSE 560



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 132/301 (43%), Gaps = 22/301 (7%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T S +   C   +A    +  H   I        +V N L+ MY +   +E +  +FD M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNME------------EEKNRNNVYDLDE 495
             RDTVSWN M+ GY   G  G A  L   M   +               +   V D+  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 496 TVLRPKP--NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            + R     +  T   VL  C +L     G +IH  A++     DVV GSAL+DMYAKC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            L+ + + F  MP +N ++W+ II     + + +  LEL K M   G     V  ++ TF
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAG-----VGVSQSTF 278

Query: 614 IALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            ++F +C+    +  G  L  + +K D+G +         +D+  +   + DA +L N +
Sbjct: 279 ASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFNSL 336

Query: 673 P 673
           P
Sbjct: 337 P 337


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/635 (38%), Positives = 355/635 (55%), Gaps = 58/635 (9%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           + T  ++H+  + N+ L  +  +   L+  Y    E    R +FD   +K +  +N MI 
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y  N    EAL +F  M   A   P+  T   V+ AC   +       +H   +K+GL 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCA-FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            + ++ NAL+ MY + G +  ++ + D M  RD VSWN+M+ GY   GQ  DAL + +EM
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 479 ------------------------------QNMEEEKNRNNVYDLDETVL------RP-- 500
                                          NM E   + N+   +  +        P  
Sbjct: 230 DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289

Query: 501 -------------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        KP+++T+ ++LP CG LSAL  G+ +H Y  +  L  ++++ +AL+D
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLD 349

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKCGCL  AR VFD M +R+V++W  ++ AYG  G+G + + L   M+  G       
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ-----N 404

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ + F+++ +ACSH+G++ +G   F  M + YGI P  +H+AC+VDL GRAG+VE+AY 
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYS 464

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP E ++   W +LL ACR+H  ++IG +AA  LF L P  + +YVLLSNIY+ A 
Sbjct: 465 FIKQMPMEPNER-VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +W   M+VR  MK++G++K PG S +E   ++H FLAGD  H Q++ ++G L+ L  +M+
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + GY+P T   LH+V  E+KE  L  HSEKLAI F ILNT  GT IR+ KNLRVC DCH 
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A K ISKI SR II+RD  RFHHF NG CSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 168/609 (27%), Positives = 281/609 (46%), Gaps = 85/609 (13%)

Query: 50  RSEARSNQFREAI-LSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           R    SN+FR  + L+ I   R  ++     A   +L    GI+ L+   ++H+ +V   
Sbjct: 9   RQILNSNKFRGFVSLTRIRFDRLKVEVFSKEACEVILDQYPGIKTLN---KLHSKIVINE 65

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
           +     T+A  L+  Y   G      Y +FDR  EK+ V +N MI +      +  AL  
Sbjct: 66  HLRIDPTLAIKLMRAYSAQGETSVARY-IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSI 124

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           F++ML     P  +T   V  ACS L   D LR+G QVH   ++VG + N FI NAL+AM
Sbjct: 125 FQVMLSCAFNPDHYTFPCVLKACSGL---DNLRVGLQVHDAIVKVGLDTNLFIGNALVAM 181

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G + +A+ +      RD+VSWN++V+  +Q+ +F +A+   ++M    +  D  ++
Sbjct: 182 YGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTM 241

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+ P                                  V  Y +   V+    +F+ ++
Sbjct: 242 ASLSP----------------------------------VVCYTSLENVQYIHNMFERMT 267

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K +  WN MI  Y  N    EA+ LF++MEE  G+ P+A T++S++PAC    A     
Sbjct: 268 KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE-CGMKPDAVTIASLLPACGDLSALFLGR 326

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H +  K  L  +  ++NAL+DMY++ G +E ++ +FD M +RD VSW +M++ Y   G
Sbjct: 327 RLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q  DA+ L  +M  ++  +N               P+SI  ++VL  C     L +G+  
Sbjct: 387 QGYDAVALFAKM--LDSGQN---------------PDSIAFVSVLSACSHTGLLDQGR-- 427

Query: 527 HAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
             +  R M     +V      + +VD++ + G +  A      MP+  N   W  ++ A 
Sbjct: 428 --HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485

Query: 581 GMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            +H +   G    +LL  +  + S           ++ L    + +GM  + M++ Y MK
Sbjct: 486 RVHSKMDIGLVAADLLFQLAPKQSG---------YYVLLSNIYAKAGMWKDVMNVRYAMK 536

Query: 638 DDYGIEPSP 646
              GI+  P
Sbjct: 537 -KIGIKKVP 544



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 41/349 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +N + EA+  +  M      PD++ FP VLKA +G+ +L +G Q+H  +VK G 
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             +++ + N LV MYGKCG  + +  KV D++  +D VSWNSM+A   + G++D ALE  
Sbjct: 169 D-TNLFIGNALVAMYGKCGC-LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226

Query: 169 RMMLYSNVEPSSFTLVSVA-LACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMY 227
           + M   N+   + T+ S++ + C                                    Y
Sbjct: 227 KEMDSLNLNHDAGTMASLSPVVC------------------------------------Y 250

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
             L  V     +F+    ++L+SWN +++    N    EAV    QM   G+KPD V+IA
Sbjct: 251 TSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIA 310

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S+LPAC  L  L  G+ +H Y  + + L  N  + +AL+DMY  C  +E  R VFD +  
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGN-LQPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           + +  W +M++ YG++    +A+ LF KM + +G  P++    SV+ AC
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLD-SGQNPDSIAFVSVLSAC 417


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 286/892 (32%), Positives = 452/892 (50%), Gaps = 100/892 (11%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F      + GI+ L+  +++HA ++K     + VT+  +++  Y + G D     KVF  
Sbjct: 31  FSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFG-DFESATKVFFV 89

Query: 140 ITEKDQVSWNSMIATLCRFG-KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
              ++ + WNS +     FG      LE F+ +    V+  S  L  V   C  L     
Sbjct: 90  GFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALME--- 146

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L LG +VH   L+ G + +  +  AL+ +Y K   +D A  +F     ++   WNTIV +
Sbjct: 147 LWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMA 206

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +++++ +A+   R+M     K    +I  +L AC  L  L+ GK+IH Y +R    + 
Sbjct: 207 NLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFG-RVS 265

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N+ + +++V MY     +E  R VFD   D  +A WN++I+ Y  N     A  LF +ME
Sbjct: 266 NTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREME 325

Query: 378 ----------------------------------EVAGLWPNATTMSSVVPACVRSEAFP 403
                                             + AG  P++ +++S + A +    F 
Sbjct: 326 SSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFN 385

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHG+ ++  L  D YV  +L+DMY +   +E ++ +F   + ++  +WN++I+GYT
Sbjct: 386 LGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYT 445

Query: 464 ICGQHGDA---LMLLRE------------------MQNMEEEK----NRNNVYDLDETVL 498
             G   +A   L+ ++E                  M    EE     NR     L   V+
Sbjct: 446 YKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVV 505

Query: 499 ----------------------------RPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
                                         KPNS T+ T+L  C   S L KG+EIH ++
Sbjct: 506 SWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFS 565

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           +++    D+ + +AL+DMY+K G L  A  VF  +  + +  WN ++M Y ++G G+EV 
Sbjct: 566 MKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVF 625

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
            L  NM   G     ++P+ +TF AL + C +SG+V +G   F  MK DY I P+ +HY+
Sbjct: 626 TLFDNMCKTG-----IRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYS 680

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VDLLG+AG +++A   I+ MP + D A  W ++L ACR+H++++I EIAA+NLF LEP
Sbjct: 681 CMVDLLGKAGFLDEALDFIHAMPQKAD-ASIWGAVLAACRLHKDIKIAEIAARNLFRLEP 739

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
             +++YVL+ NIYS+ + W     +++ M  MGV+     SWI+    IH F     SH 
Sbjct: 740 YNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHP 799

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           +  +++  L  L   ++K GYVPDT+CV  N+++ EKE +L  H+EKLA+ +G++    G
Sbjct: 800 EEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGG 859

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T IRV KN R+C DCH A K+IS   +REI LRD  RFHHF NG CSC D W
Sbjct: 860 TPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 265/585 (45%), Gaps = 105/585 (17%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + +  RS ++ +A+     M  +  +  +     +L+A   ++ L+ GKQIH +V+
Sbjct: 200 WNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVI 259

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL----CRFGK 160
           ++G  +S+ ++ N++V+MY +  + +     VFD   + +  SWNS+I++     C  G 
Sbjct: 260 RFGR-VSNTSICNSIVSMYSR-NNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGA 317

Query: 161 WDLALEAFRMMLYSNVEPSSFT---LVSVAL-----------------------ACSNLS 194
           WDL    FR M  S+++P   T   L+S  L                       +CS  S
Sbjct: 318 WDL----FREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITS 373

Query: 195 RRDGL------RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
               +       LG+++HG  +R   E++ ++  +L+ MY K   ++ A+ +F   ++++
Sbjct: 374 ALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKN 433

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           + +WN+++S  +    F  A   L QM   GIK D V+  S++   S      +G    A
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSM-----SGCSEEA 488

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
            A+ N                           R+        +  W AMI+G  QNE   
Sbjct: 489 LAVIN---------------------------RIKSLGLTPNVVSWTAMISGCCQNENYT 521

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           +AL  F +M+E   + PN+TT+S+++ AC         E IH  ++K G   D Y+  AL
Sbjct: 522 DALQFFSQMQE-ENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATAL 580

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMYS+ G+++++  +F +++ +    WN M+ GY I G HG+ +  L +          
Sbjct: 581 IDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYG-HGEEVFTLFD---------- 629

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----- 542
               ++ +T +R  P++IT   +L GC        G  +  +   + + TD  +      
Sbjct: 630 ----NMCKTGIR--PDAITFTALLSGCK-----NSGLVMDGWKYFDSMKTDYSINPTIEH 678

Query: 543 -SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            S +VD+  K G L+ A      MP + +   W  ++ A  +H +
Sbjct: 679 YSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKD 723



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 164/360 (45%), Gaps = 45/360 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L        +   + +   +  +  +PD+ +  + L+AV  +   +LGK+IH ++
Sbjct: 335 TWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYI 394

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       V V  +LV+MY K    +     VF     K+  +WNS+I+     G +D 
Sbjct: 395 MRSKLEY-DVYVCTSLVDMYIK-NDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDN 452

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A +    M                       + +G++               +    N+L
Sbjct: 453 AEKLLIQM-----------------------KEEGIKA--------------DLVTWNSL 475

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDL----VSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           ++ Y+  G  ++A  +    +   L    VSW  ++S   QN+ + +A+ F  QM    +
Sbjct: 476 VSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENV 535

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KP+  +I+++L AC+   +L  G+EIH +++++   +D+ ++ +AL+DMY    +++   
Sbjct: 536 KPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHG-FVDDIYIATALIDMYSKGGKLKVAH 594

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF  I +K +  WN M+ GY    + EE   LF  M +  G+ P+A T ++++  C  S
Sbjct: 595 EVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCK-TGIRPDAITFTALLSGCKNS 653


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/633 (39%), Positives = 361/633 (57%), Gaps = 44/633 (6%)

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           L QMAL G      +  ++L  C +      G+ +HA+ ++   L  + F+ + L+ +Y 
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYL-PSVFLRTRLIVLYT 289

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF----------------I 374
            C  +     VFD + ++ +  W AMI+ Y Q  Y  +AL LF                +
Sbjct: 290 KCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKL 349

Query: 375 KMEEVAGLW----PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           K+      W    PN  T ++V+ +C  S  F     IH   IKL      +V ++L+DM
Sbjct: 350 KLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDM 409

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++ G+I  ++T+F+ +  RD VS   +I+GY   G   +AL L R +Q           
Sbjct: 410 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGM------- 462

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                     K N +T   VL     L+AL  GK++H + +R+ + + VV+ ++L+DMY+
Sbjct: 463 ----------KSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYS 512

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG L ++RR+FD M  R VI+WN +++ Y  HGEG+EVL+L   M  E     +VKP+ 
Sbjct: 513 KCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREET----KVKPDS 568

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKD-DYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           VT +A+ + CSH G+  +G+++F  M      +EP  +HY CVVDLLGR+G+VE+A++ I
Sbjct: 569 VTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFI 628

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
             MP E   A  W SLLGACR+H NV+IGE A Q L  +EP  A +YV+LSN+Y+SA  W
Sbjct: 629 KKMPFE-PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRW 687

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           +    +R  M +  V KEPG S IE    +H F A D SH + E++   ++ LS   ++ 
Sbjct: 688 EDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEV 747

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYVPD SCVLH+V+EE+KE +L GHSEKLA++FG++ +P    IRV KNLR+C DCH   
Sbjct: 748 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFA 807

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K+ISK+  RE+ LRD  RFH    G CSC DYW
Sbjct: 808 KYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 41/410 (10%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A+L      +    G+++HAH++K  Y L SV +   L+ +Y KC S + D + VFD 
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDS-LGDAHNVFDE 303

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAF--------------RMMLYSN-------VEP 178
           + E++ VSW +MI+   + G    AL  F                +  SN        EP
Sbjct: 304 MPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEP 363

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           + FT  +V  +C++     G  LGRQ+H   +++  E + F+ ++L+ MYAK G++ +A+
Sbjct: 364 NEFTFATVLTSCTS---SLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEAR 420

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
           T+F+   +RD+VS   I+S  +Q     EA+   R++   G+K + V+   VL A S L 
Sbjct: 421 TVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLA 480

Query: 298 MLDTGKEIHAYALRNDILIDNSFV--GSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
            LD GK++H + LR++I    SFV   ++L+DMY  C  +   RR+FD + ++ +  WNA
Sbjct: 481 ALDLGKQVHNHVLRSEI---PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 537

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-----EGIHG 410
           M+ GY ++    E L LF  M E   + P++ T+ +V+  C       DK       +  
Sbjct: 538 MLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHG-GLEDKGLNIFNDMSS 596

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
             I++    + Y    ++D+  R GR+E +      M    T + W +++
Sbjct: 597 GKIEVEPKMEHY--GCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 644



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 9/235 (3%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           +P+ F F  VL +        LG+QIH+ ++K  Y    V V ++L++MY K G  + + 
Sbjct: 362 EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYE-DHVFVGSSLLDMYAKDGK-IHEA 419

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
             VF+ + E+D VS  ++I+   + G  + ALE FR +    ++ +  T   V  A S L
Sbjct: 420 RTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGL 479

Query: 194 SRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           +    L LG+QVH + LR  E  +F++  N+L+ MY+K G +  ++ +F +  +R ++SW
Sbjct: 480 A---ALDLGKQVHNHVLR-SEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISW 535

Query: 252 NTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           N ++   S++ +  E + +F        +KPD V+I +VL  CSH  + D G  I
Sbjct: 536 NAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNI 590



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 5/184 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  +  +    ++ +   +  VL A++G+  L LGKQ+H HV++     S V + N+L
Sbjct: 449 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIP-SFVVLQNSL 507

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEP 178
           ++MY KCG+  +   ++FD + E+  +SWN+M+    + G+    L+ F +M   + V+P
Sbjct: 508 IDMYSKCGNLTYS-RRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKP 566

Query: 179 SSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAK 237
            S T+++V   CS+    D GL +   +    + V E        ++ +  + GRV++A 
Sbjct: 567 DSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEV-EPKMEHYGCVVDLLGRSGRVEEAF 625

Query: 238 TLFK 241
              K
Sbjct: 626 EFIK 629


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/718 (36%), Positives = 402/718 (55%), Gaps = 39/718 (5%)

Query: 92  DLSLGKQIHAHVVKYGYGLS----SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS 147
           +L   + +HA ++  G+       S + A+ LVN+Y   GS +   +  F  +  K  ++
Sbjct: 42  NLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGS-LQHAFLTFRALPHKPIIA 100

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN+++  L   G +  A+  +  ML   V P ++T   V  ACS+L     L+LGR VH 
Sbjct: 101 WNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSL---HALQLGRWVHE 157

Query: 208 NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
                 + N ++  A++ M+AK G V+DA+ +F+   DRDL SW  ++     N + LEA
Sbjct: 158 TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEA 217

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           ++  R+M   G+ PD V +AS+LPAC  LE +  G  +   A+R+    D  +V +A++D
Sbjct: 218 LLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESD-LYVSNAVID 276

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MYC C +     RVF  +    +  W+ +I GY QN   +E+  L+I M  V GL  NA 
Sbjct: 277 MYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINV-GLATNAI 335

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
             +SV+PA  + E     + +H   +K GL  D  V +AL+ MY+  G I+ +++IF+  
Sbjct: 336 VATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECT 395

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +D + WN+MI GY + G    A    R +   E                  +PN IT+
Sbjct: 396 SDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH-----------------RPNFITV 438

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++LP C  + AL +GKEIH Y  ++ L  +V VG++L+DMY+KCG L    +VF  M V
Sbjct: 439 VSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMV 498

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           RNV T+N +I A G HG+G++ L   + M  EG+R     PN+VTFI+L +ACSH+G++ 
Sbjct: 499 RNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNR-----PNKVTFISLLSACSHAGLLD 553

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
            G  L+  M +DYGIEP+ +HY+C+VDL+GRAG ++ AY+ I  MP   D A  + SLLG
Sbjct: 554 RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPD-ANVFGSLLG 612

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           ACR+H  VE+ E+ A+ +  L+ D + HYVLLSN+Y+S + W+    VR  +K+ G+ K+
Sbjct: 613 ACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKK 672

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           PG SWI+ G  I+ F A    H    ++   L +L   M+ E Y      +L NVN++
Sbjct: 673 PGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKSEDY------MLTNVNDK 724



 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 182/606 (30%), Positives = 301/606 (49%), Gaps = 35/606 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   LR       F +AI  Y  M +  + PDN+ +P VLKA + +  L LG+ +H   
Sbjct: 100 AWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-- 157

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G   ++V V   +++M+ KCGS + D  ++F+ + ++D  SW ++I      G+   
Sbjct: 158 TMHGKTKANVYVQCAVIDMFAKCGS-VEDARRMFEEMPDRDLASWTALICGTMWNGECLE 216

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  FR M    + P S  + S+  AC    R + ++LG  +   ++R G E + ++ NA
Sbjct: 217 ALLLFRKMRSEGLMPDSVIVASILPAC---GRLEAVKLGMALQVCAVRSGFESDLYVSNA 273

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MY K G   +A  +F      D+VSW+T+++  SQN  + E+      M   G+  +
Sbjct: 274 VIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATN 333

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +   SVLPA   LE+L  GKE+H + L+  ++ D   VGSAL+ MY NC  ++    +F
Sbjct: 334 AIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSD-VVVGSALIVMYANCGSIKEAESIF 392

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +  SDK I +WN+MI GY      E A   F ++   A   PN  T+ S++P C +  A 
Sbjct: 393 ECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWG-AEHRPNFITVVSILPICTQMGAL 451

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IHG+  K GLG +  V N+L+DMYS+ G +E+ + +F  M VR+  ++NTMI+  
Sbjct: 452 RQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISA- 510

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
             CG HG     L   + M+EE NR              PN +T +++L  C     L +
Sbjct: 511 --CGSHGQGEKGLAFYEQMKEEGNR--------------PNKVTFISLLSACSHAGLLDR 554

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G  ++   I +  +  ++   S +VD+  + G L+ A +    MP+  +   +  ++ A 
Sbjct: 555 GWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGAC 614

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            +H +  E+ ELL   +       ++K ++     L +    SG   E M     M  D 
Sbjct: 615 RLHNK-VELTELLAERIL------QLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDK 667

Query: 641 GIEPSP 646
           G+E  P
Sbjct: 668 GLEKKP 673


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/674 (36%), Positives = 382/674 (56%), Gaps = 58/674 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++FKS ++ + +SWNT++   + +   + A+     M   G+ P+  +   +  +C+ 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
            +    GK+IHA  L+  + +D   V ++L+ MY     VE   +VFD  S + +  + A
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVD-LHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149

Query: 356 MITGYG--------QNEYDE-----------------------EALMLFIKMEEVAGLWP 384
           MITGY         Q  +DE                       EAL LF +M ++  + P
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM-DVKP 208

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           + +TM++V+  C  S        IH      G G +  + NAL+D+YS+ G +E +  +F
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           + ++ +D +SWNT+I GY     H +AL++ +EM  + E                  PN 
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGE-----------------TPND 311

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVF 562
           +T++++LP C  L A+  G+ IH Y  + +  + T+  + ++L+DMYAKCG +  A +VF
Sbjct: 312 VTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVF 371

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D +  +++ + N +I  + MHG      +LL  M  +G     ++P+++TF+ L +ACSH
Sbjct: 372 DTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDG-----IEPDDITFVGLLSACSH 426

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           +G+   G  +F  M  DY IEP  +HY C++DLLGR+G  ++A +LIN M  E D    W
Sbjct: 427 AGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGV-IW 485

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            SLL AC+IH+N+E+GE+ AQ L  +EP     YVLLSNIY+++  WD    VR  + + 
Sbjct: 486 GSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDK 545

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           G++K PGCS IE    +H+FL GD  H Q+++++  LE +   + + G+V DTS VL  +
Sbjct: 546 GLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEM 605

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            EE KE  L  HSEKLAIAFG+++T PGT +R+ KNLRVC +CH+ATK ISKI  REII 
Sbjct: 606 EEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIA 665

Query: 863 RDVRRFHHFKNGTC 876
           RD  RFHHFK+G C
Sbjct: 666 RDRSRFHHFKDGMC 679



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 229/461 (49%), Gaps = 51/461 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +R  A S+    A+  Y+ M    + P+++ FP + K+ A  +    GKQIHA +
Sbjct: 45  SWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQI 104

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDV 133
           +KYG  +  + V  +L++MY + G                               +M   
Sbjct: 105 LKYGLTVD-LHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKA 163

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            K+FD I  KD VSWN+MI+     G++  ALE F  M+  +V+P   T+ +V   C++ 
Sbjct: 164 QKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH- 222

Query: 194 SRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                + LGRQ+H   ++   G  N  ++NAL+ +Y+K G ++ A  LF+  + +D++SW
Sbjct: 223 --SGNVELGRQIHSWIDNHGFGS-NLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISW 279

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           NT++   +  +   EA++  ++M   G  P+ V++ S+LPAC+HL  +D G+ IH Y  +
Sbjct: 280 NTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 339

Query: 312 N-DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
               +I N+ + ++L+DMY  C  +E   +VFD I +K ++  NAMI G+  +   + A 
Sbjct: 340 KLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAF 399

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL--- 427
            L  +M++  G+ P+  T   ++ AC  +    D     G  I   +  D  ++  L   
Sbjct: 400 DLLSRMKK-DGIEPDDITFVGLLSACSHA-GLSDL----GRKIFKSMTLDYRIEPKLEHY 453

Query: 428 ---MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
              +D+  R G  + ++ + + M +  D V W +++    I
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKI 494



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 231/491 (47%), Gaps = 72/491 (14%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF  I E +Q+SWN+MI           AL  +  M+   + P+S+T   +  +C   ++
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSC---AK 90

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-------------- 240
               + G+Q+H   L+ G   +  +  +L++MYA+ G V+DA  +F              
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 241 --------------KSFED---RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                         K F++   +D+VSWN ++S  ++  ++ EA+    +M    +KPD 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS------ALVDMYCNCREVEC 337
            ++A+VL  C+H   ++ G++IH++       IDN   GS      AL+D+Y  C E+E 
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSW-------IDNHGFGSNLKLVNALIDLYSKCGEMER 263

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              +F+ +  K +  WN +I GY    + +EAL++F +M ++ G  PN  TM S++PAC 
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKL-GETPNDVTMLSILPACA 322

Query: 398 RSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
              A      IH +  K   G+  +  +Q +L+DMY++ G IE +  +FD +  +   S 
Sbjct: 323 HLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSC 382

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC- 514
           N MI G+ + G+   A  LL  M+       ++ +          +P+ IT + +L  C 
Sbjct: 383 NAMIFGFAMHGRADAAFDLLSRMK-------KDGI----------EPDDITFVGLLSACS 425

Query: 515 -GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
              LS L + K   +  +   +   +     ++D+  + G    A  + + M +  + + 
Sbjct: 426 HAGLSDLGR-KIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVI 484

Query: 573 WNVIIMAYGMH 583
           W  ++ A  +H
Sbjct: 485 WGSLLKACKIH 495



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 136/314 (43%), Gaps = 39/314 (12%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G Q +   SW   +   A  N  +EA+L + EM +    P++    ++L A A +  + +
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329

Query: 96  GKQIHAHVVKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           G+ IH ++ K   G +++ ++  +L++MY KCG ++    +VFD I  K   S N+MI  
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG-NIEAANQVFDTILNKSLSSCNAMIFG 388

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
               G+ D A +    M    +EP   T V +  ACS+    D   LGR++         
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSD---LGRKIF-------- 437

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
                                + TL    E + L  +  ++  L ++  F EA   +  M
Sbjct: 438 --------------------KSMTLDYRIEPK-LEHYGCMIDLLGRSGLFKEAEELINSM 476

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            +   +PDGV   S+L AC   + L+ G+ I    ++ +     S+V   L ++Y     
Sbjct: 477 TM---EPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYV--LLSNIYATSAR 531

Query: 335 VECGRRVFDFISDK 348
            +   RV   ++DK
Sbjct: 532 WDDVARVRTLLNDK 545


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 372/661 (56%), Gaps = 31/661 (4%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY+KL   + A+ + +    R++VSW +++S L+QN  F  A++   +M   G+ P+  +
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
                 A + L +  TGK+IHA A++   ++D  FVG +  DMYC  R  +  R++FD I
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            ++ +  WNA I+    +    EA+  FI+   + G  PN+ T  + + AC         
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLG 178

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +HG  ++ G   D  V N L+D Y +  +I  S+ IF +M  ++ VSW +++  Y   
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY--- 235

Query: 466 GQHGDALMLLREMQNMEEEKNR----NNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                       +QN E+EK       +  D+ ET      +   + +VL  C  ++ L 
Sbjct: 236 ------------VQNHEDEKASVLYLRSRKDIVET------SDFMISSVLSACAGMAGLE 277

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G+ IHA+A++  +   + VGSALVDMY KCGC+  + + FD MP +N++T N +I  Y 
Sbjct: 278 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 337

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G+    L L + M     RG    PN +TF++L +ACS +G V  GM +F  M+  YG
Sbjct: 338 HQGQVDMALALFEEM---APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG 394

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           IEP  +HY+C+VD+LGRAG VE AY+ I  MP +      W +L  ACR+H   ++G +A
Sbjct: 395 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ-PTISVWGALQNACRMHGKPQLGLLA 453

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+NLF L+P  + ++VLLSN +++A  W +A  VR+++K +G++K  G SWI   +++H 
Sbjct: 454 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 513

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F A D SH  ++++   L  L   M   GY PD    L+++ EEEK   +  HSEKLA+A
Sbjct: 514 FQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALA 573

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+L+ P    IR+ KNLR+C DCH   KF+S    REII+RD  RFH FK+G CSC DY
Sbjct: 574 FGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDY 633

Query: 882 W 882
           W
Sbjct: 634 W 634



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 21/446 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F  A++ + EM R  + P++F FP   KAVA ++    GKQIHA  
Sbjct: 25  SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMW-DVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G  L  V V  +  +MY  C + +  D  K+FD I E++  +WN+ I+     G+  
Sbjct: 85  VKCGRIL-DVFVGCSAFDMY--CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 141

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+EAF      +  P+S T  +   ACS+      L LG Q+HG  LR G + +  + N
Sbjct: 142 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH---LNLGMQLHGLVLRSGFDTDVSVCN 198

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQMALRGIK 280
            L+  Y K  ++  ++ +F     ++ VSW ++V++  QN +  +A V++LR      ++
Sbjct: 199 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVE 257

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
                I+SVL AC+ +  L+ G+ IHA+A++   +    FVGSALVDMY  C  +E   +
Sbjct: 258 TSDFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQ 316

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVPACVRS 399
            FD + +K +   N++I GY      + AL LF +M     G  PN  T  S++ AC R+
Sbjct: 317 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 376

Query: 400 EAFPDKEGIHG---HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
            A  +   I         +  G + Y  + ++DM  R G +E +      M ++ T+S W
Sbjct: 377 GAVENGMKIFDSMRSTYGIEPGAEHY--SCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 434

Query: 456 NTMITGYTICGQHGDALMLLREMQNM 481
             +      C  HG   + L   +N+
Sbjct: 435 GAL---QNACRMHGKPQLGLLAAENL 457



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 217/461 (47%), Gaps = 31/461 (6%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL- 201
           ++ VSW S+I+ L + G +  AL  F  M    V P+ FT      A ++      LRL 
Sbjct: 21  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS------LRLP 74

Query: 202 --GRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+Q+H  +++ G   + F+  +   MY K    DDA+ LF    +R+L +WN  +S+ 
Sbjct: 75  VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNS 134

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
             + +  EA+    +       P+ ++  + L ACS    L+ G ++H   LR+    D 
Sbjct: 135 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 194

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           S V + L+D Y  C+++     +F  +  K    W +++  Y QN  DE+A +L+++  +
Sbjct: 195 S-VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 253

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
              +  +   +SSV+ AC           IH HA+K  + R  +V +AL+DMY + G IE
Sbjct: 254 DI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 312

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            S+  FD+M  ++ V+ N++I GY   GQ   AL L  EM                    
Sbjct: 313 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA---------------PRGC 357

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLN 556
            P PN +T +++L  C    A+  G +I   ++R+    +      S +VDM  + G + 
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVE 416

Query: 557 FARRVFDLMPVRNVIT-WNVIIMAYGMHGEGQEVLELLKNM 596
            A      MP++  I+ W  +  A  MHG+ Q  L   +N+
Sbjct: 417 RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 457



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 25/389 (6%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           E+W   + +     + REAI ++IE  R D  P++  F A L A +    L+LG Q+H  
Sbjct: 125 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 184

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V++ G+  + V+V N L++ YGKC   +     +F  +  K+ VSW S++A   +  + +
Sbjct: 185 VLRSGFD-TDVSVCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 242

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A   +       VE S F + SV  AC+ ++   GL LGR +H ++++   E   F+ +
Sbjct: 243 KASVLYLRSRKDIVETSDFMISSVLSACAGMA---GLELGRSIHAHAVKACVERTIFVGS 299

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-- 279
           AL+ MY K G ++D++  F    +++LV+ N+++   +   +   A+    +MA RG   
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECG 338
            P+ ++  S+L ACS    ++ G +I   ++R+   I+  +   S +VDM      VE  
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVE-- 416

Query: 339 RRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP----NATTMS 390
            R ++FI        I++W A+      +   +  L+     E +  L P    N   +S
Sbjct: 417 -RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL---AAENLFKLDPKDSGNHVLLS 472

Query: 391 SVVPACVR-SEAFPDKEGIHGHAIKLGLG 418
           +   A  R +EA   +E + G  IK G G
Sbjct: 473 NTFAAAGRWAEANTVREELKGVGIKKGAG 501



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T+   SW   + +  ++++  +A + Y+   +  ++  +F   +VL A AG+  L LG+ 
Sbjct: 222 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 281

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IHAH VK      ++ V + LV+MYGKCG  + D  + FD + EK+ V+ NS+I      
Sbjct: 282 IHAHAVKACVE-RTIFVGSALVDMYGKCGC-IEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 339

Query: 159 GKWDLALEAFRMMLYSNVEPSS--FTLVSVALACS 191
           G+ D+AL  F  M      P+    T VS+  ACS
Sbjct: 340 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 374


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 294/823 (35%), Positives = 461/823 (56%), Gaps = 44/823 (5%)

Query: 72   DIQPDNFAFPAVLKAVAGIQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
            +++P+   F +++ A + +   S G   Q+ A V+K G   S + V + LV+ + + G  
Sbjct: 264  ELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSS-SDLYVGSALVSAFARHG-- 319

Query: 130  MWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            M D  K +F  + E++ V+ N +I  L +    + A+  F M    +   ++ T V +  
Sbjct: 320  MLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRDSFVVNTDTFVVLLS 378

Query: 189  ACSNLS-RRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
            A +  S   DGL  GR+VHG+ LR G  +    + N L+ MYAK G +D A  +F+    
Sbjct: 379  AVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCA 438

Query: 246  RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKE 304
            RD VSWNTI+S L QN  F E  M    M  +G I P   +  S L +C+ L +L  G++
Sbjct: 439  RDRVSWNTIISVLDQNG-FCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQ 497

Query: 305  IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI-TGYGQN 363
            +H  A++  + +D S V +ALV MY +C        +F+ +++  I  WN+++      +
Sbjct: 498  VHCDAVKWGLDLDTS-VSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSH 556

Query: 364  EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
                E++ +F  M   +GL PN  T  +++ A          + +H   +K G   D  V
Sbjct: 557  APTAESVEVFSNMMR-SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAV 615

Query: 424  QNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
             NALM  Y++ G ++  + +F  M   RD VSWN+MI+GY   G       L   M  + 
Sbjct: 616  DNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGH------LQETMDCVW 669

Query: 483  EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
               + N + D             T   VL  C +++AL +G E+HA+ IR+ L +DVVV 
Sbjct: 670  LMMHSNQMLD-----------CCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVE 718

Query: 543  SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            SAL+DMY+KCG +++A +VF+ M  +N  +WN +I  Y  HG G++ LE+ + M   G+ 
Sbjct: 719  SALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGA- 777

Query: 603  GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
                 P+ VTF+++ +ACSH+G+V  G+D +++M +D+GI P  +HY+CV+DLLGRAGK+
Sbjct: 778  ----CPDHVTFVSVLSACSHAGLVDRGLD-YFEMMEDHGILPHIEHYSCVIDLLGRAGKL 832

Query: 663  EDAYQLINMMPPEFDKAGAWSSLLGACRIHQN---VEIGEIAAQNLFLLEPDVASHYVLL 719
                + IN MP + +    W ++L ACR  ++   +++G+ A++ L  LEP    +YVL 
Sbjct: 833  LKIQEYINRMPMKPNTL-IWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLA 891

Query: 720  SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
            SN Y++   W+     R  M    ++KE G SW+  GD +H F+AGD SH  +++++  L
Sbjct: 892  SNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKL 951

Query: 780  ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
              L ++++  GYVP T   L+++ EE KE LL  HSEKLA+AF +  +     IR+ KNL
Sbjct: 952  NFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNL 1011

Query: 840  RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            RVC DCH A ++IS+I  R+IILRD  RFHHF++G CSCGDYW
Sbjct: 1012 RVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 239/461 (51%), Gaps = 26/461 (5%)

Query: 40  RCKESWIESLRSEARSNQFRE-AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           R + SW  ++ S    N F E A+++Y  M +  I P NFA  + L + A ++ L+ G+Q
Sbjct: 439 RDRVSW-NTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQ 497

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +H   VK+G  L + +V+N LV MYG CG  S+ W+   +F+ + E D VSWNS++  + 
Sbjct: 498 VHCDAVKWGLDLDT-SVSNALVKMYGDCGARSESWE---IFNSMAEHDIVSWNSIMGVMV 553

Query: 157 -RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
                   ++E F  M+ S + P+  T V++  A S LS    L LG+QVH   L+ G  
Sbjct: 554 SSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSV---LELGKQVHAVVLKHGAI 610

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            +  + NALM+ YAK G +D  + LF S    RD VSWN+++S    N    E +  +  
Sbjct: 611 EDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWL 670

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M       D  + + VL AC+ +  L+ G E+HA+ +R+ +  D   V SAL+DMY  C 
Sbjct: 671 MMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESD-VVVESALLDMYSKCG 729

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++   +VF+ +S K    WN+MI+GY ++   E+AL +F +M+   G  P+  T  SV+
Sbjct: 730 RIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQR-NGACPDHVTFVSVL 788

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR- 450
            AC  S A     G+    +    G   ++++   ++D+  R G++   +   + M ++ 
Sbjct: 789 SAC--SHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKP 846

Query: 451 DTVSWNTMITGYTICGQH--GDALMLLREMQNMEEEKNRNN 489
           +T+ W T++     C Q   GD + L +E   M  E    N
Sbjct: 847 NTLIWRTVLVA---CRQSKDGDRIDLGKEASRMLLELEPQN 884



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/606 (25%), Positives = 286/606 (47%), Gaps = 45/606 (7%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++H  +VK G     + ++N LVN+Y K GS +    +VFD + E++ VSW  +++   
Sbjct: 76  ERLHLELVKRGL-THDLFLSNHLVNLYAK-GSRLAAARQVFDGMLERNAVSWTCLVSGYV 133

Query: 157 RFGKWDLALEAFRMMLYSNVE---PSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRV 212
             G  D A   F+ ML+   E   P+ FT  SV  AC + +  D L    QVHG  S  +
Sbjct: 134 LSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQD-AGPDLLAFAVQVHGLVSKTI 192

Query: 213 GEWNTFIMNALMAMYAK--LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
              NT + NAL++MY    +G    A+ +F +   RDL++WN ++S  ++    +     
Sbjct: 193 YASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTL 252

Query: 271 LRQM----ALRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRNDILIDNSFVGSA 324
              M    +   ++P+  +  S++ A S L    +G   ++ A  L++    D  +VGSA
Sbjct: 253 FMAMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSD-LYVGSA 310

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE--VAGL 382
           LV  +     ++  + +F  + ++     N +I G  +    EEA+ +F+   +  V   
Sbjct: 311 LVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNT 370

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISK 441
                 +S+V    +  +       +HGH ++ GL   +  + N L++MY++ G I+ + 
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F  +  RD VSWNT+I+     G    A+M               N   + +  +   
Sbjct: 431 RVFRLLCARDRVSWNTIISVLDQNGFCEGAMM---------------NYCMMRQGCI--S 473

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P++   ++ L  C +L  L  G+++H  A++  L  D  V +ALV MY  CG  + +  +
Sbjct: 474 PSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEI 533

Query: 562 FDLMPVRNVITWNVII-MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           F+ M   ++++WN I+ +    H    E +E+  NM+  G     + PN+VTF+ L +A 
Sbjct: 534 FNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSG-----LTPNKVTFVNLLSAL 588

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           S   ++  G  +   +     IE +    A ++    ++G ++   QL + M    D A 
Sbjct: 589 SPLSVLELGKQVHAVVLKHGAIEDNAVDNA-LMSCYAKSGDMDSCEQLFSSMSGRRD-AV 646

Query: 681 AWSSLL 686
           +W+S++
Sbjct: 647 SWNSMI 652



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 224/492 (45%), Gaps = 51/492 (10%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N L+ +YAK  R+  A+ +F    +R+ VSW  +VS    +    EA    + M 
Sbjct: 90  DLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAML 149

Query: 276 LRG---IKPDGVSIASVLPACSHLEMLDTGKEIHAYALR------NDILIDNSFVGSALV 326
             G    +P   +  SVL AC      D G ++ A+A++        I   N+ V +AL+
Sbjct: 150 WEGSEFSRPTPFTFGSVLRACQ-----DAGPDLLAFAVQVHGLVSKTIYASNTTVCNALI 204

Query: 327 DMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM---EEVAG 381
            MY NC        ++VFD    + +  WNA+++ Y +  Y      LF+ M   +    
Sbjct: 205 SMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIE 264

Query: 382 LWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           L PN  T  S++ A   S       + +    +K G   D YV +AL+  ++R G ++ +
Sbjct: 265 LRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEA 324

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           K IF +++ R+ V+ N +I G                 Q+  EE     +   D  V+  
Sbjct: 325 KDIFINLKERNAVTLNGLIVGLV--------------KQHCSEEAVGIFMGTRDSFVV-- 368

Query: 501 KPNSITLMTVLPGCGALS----ALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCL 555
             N+ T + +L      S     L +G+E+H + +R  ++   + + + LV+MYAKCG +
Sbjct: 369 --NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A RVF L+  R+ ++WN II     +G  +  +     M     R G + P+    I+
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMM-----RQGCISPSNFAAIS 481

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
             ++C+   +++ G  +       +G++        +V + G  G   +++++ N M  E
Sbjct: 482 GLSSCASLRLLTAGQQVHCDAV-KWGLDLDTSVSNALVKMYGDCGARSESWEIFNSM-AE 539

Query: 676 FDKAGAWSSLLG 687
            D   +W+S++G
Sbjct: 540 HDIV-SWNSIMG 550



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 25/272 (9%)

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
           EA P++  +H   +K GL  D ++ N L+++Y++  R+  ++ +FD M  R+ VSW  ++
Sbjct: 72  EAAPER--LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC--GAL 517
           +GY + G   +A  + + M     E +R              P   T  +VL  C     
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSR--------------PTPFTFGSVLRACQDAGP 175

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC--GCLNFARRVFDLMPVRNVITWNV 575
             LA   ++H    + + A++  V +AL+ MY  C  G    A++VFD  PVR++ITWN 
Sbjct: 176 DLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNA 235

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           ++  Y   G       L   M+ + S   E++PNE TF +L  A S S   S  +D  + 
Sbjct: 236 LMSVYAKKGYVVSTFTLFMAMLHDDS-AIELRPNEHTFGSLITATSLSSCSSGVLDQVFA 294

Query: 636 MKDDYGIEPSPDHY--ACVVDLLGRAGKVEDA 665
                G   S D Y  + +V    R G +++A
Sbjct: 295 RVLKSG--SSSDLYVGSALVSAFARHGMLDEA 324



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 54/355 (15%)

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
           P   HLE++  G       L +D+ + N      LV++Y     +   R+VFD + ++  
Sbjct: 75  PERLHLELVKRG-------LTHDLFLSNH-----LVNLYAKGSRLAAARQVFDGMLERNA 122

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW-------PNATTMSSVVPACVRSEAFP 403
             W  +++GY  +   +EA  +F  M     LW       P   T  SV+ AC   +A P
Sbjct: 123 VSWTCLVSGYVLSGITDEAFRVFKAM-----LWEGSEFSRPTPFTFGSVLRAC--QDAGP 175

Query: 404 D----KEGIHGHAIKLGLGRDRYVQNALMDMYSR--MGRIEISKTIFDDMEVRDTVSWNT 457
           D       +HG   K     +  V NAL+ MY    +G    ++ +FD   VRD ++WN 
Sbjct: 176 DLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNA 235

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +++ Y   G       L   M +             D++ +  +PN  T  +++    +L
Sbjct: 236 LMSVYAKKGYVVSTFTLFMAMLH-------------DDSAIELRPNEHTFGSLITAT-SL 281

Query: 518 SALAKG--KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           S+ + G   ++ A  +++  ++D+ VGSALV  +A+ G L+ A+ +F  +  RN +T N 
Sbjct: 282 SSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNG 341

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           +I+        +E + +       G+R   V  N  TF+ L +A +   +  +G+
Sbjct: 342 LIVGLVKQHCSEEAVGIFM-----GTRDSFVV-NTDTFVVLLSAVAEFSIPEDGL 390


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/761 (33%), Positives = 424/761 (55%), Gaps = 41/761 (5%)

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M D  ++FD + + D   WN MI      G +  AL+ +  M++S V+  SFT   V  +
Sbjct: 76  MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKS 135

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
            + +S    L  G+++H   +++    + ++ N+L+++Y KLG   DA+ +F+   +RD+
Sbjct: 136 VTGIS---SLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDI 192

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           VSWN+++S     +    ++M  ++M   G KPD  S  S L ACSH+   + GKE+H +
Sbjct: 193 VSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCH 252

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           A+R+ I   +  V ++++DMY    EV    R+F  I  + I  WN +I  Y +N    +
Sbjct: 253 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTD 312

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A + F KM E  GL P+  T+ +++PAC    A  +   IHG+A++ G      +  AL+
Sbjct: 313 AFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMRRGFLPHIVLDTALI 368

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY   G+++ ++ IFD +  ++ +SWN++I  Y   G++  AL L +++          
Sbjct: 369 DMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKL---------- 418

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                D ++L   P+S T+ ++LP      +L++G++IHAY +++   ++ ++ ++LV M
Sbjct: 419 ----WDSSLL---PDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHM 471

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YA CG L  AR+ F+ + +++V++WN IIMAY +HG G+  + L   M+A      +V P
Sbjct: 472 YAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIA-----SKVDP 526

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N+ TF +L AACS SGMV EG + F  MK +YGI+P  +HY  ++DL+GR G    A + 
Sbjct: 527 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRF 586

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP     A  W SLL A R H ++ + E AA+ +F +E D    YVLL N+Y+ A+ 
Sbjct: 587 IREMPF-LPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARR 645

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W+    ++  M+  G+ +    S +E   + H    GD SH ++ +++  L+ +S  + +
Sbjct: 646 WEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGE 705

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCG-------HSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           E    +    +H V++  +ETL          HS +LA  FG+++T  G T+ V  N R+
Sbjct: 706 E---EEEDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRI 762

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C  CH+  +  SK+  REI++ D + FHHF NG CSCG+YW
Sbjct: 763 CRKCHEFLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 297/571 (52%), Gaps = 50/571 (8%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + EA+  Y  M  S ++ D+F +P V+K+V GI  L  GK+IHA V+K  + +S V V N
Sbjct: 107 YFEALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRF-VSDVYVCN 165

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           +L+++Y K G   WD  KVF+ + E+D VSWNSMI+          +L  F+ ML    +
Sbjct: 166 SLISLYMKLGCS-WDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFK 224

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDD 235
           P  F+ +S   ACS++   +   +G+++H +++  R+   +  +M +++ MY+K G V  
Sbjct: 225 PDRFSTMSALGACSHVYSPN---MGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 281

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACS 294
           A+ +FK    R++V+WN ++   ++N +  +A +  ++M+ + G++PD +++ ++LPAC+
Sbjct: 282 AERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA 341

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            LE    G+ IH YA+R   L  +  + +AL+DMY    +++    +FD I++K +  WN
Sbjct: 342 ILE----GRTIHGYAMRRGFL-PHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWN 396

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           ++I  Y QN  +  AL LF K+ + + L P++TT++S++PA   S +  +   IH + +K
Sbjct: 397 SIIAAYVQNGKNYSALELFQKLWD-SSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVK 455

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
              G +  + N+L+ MY+  G +E ++  F+ + ++D VSWN++I  Y + G    ++ L
Sbjct: 456 SRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCL 515

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EM                    +  PN  T  ++L  C     + +G E      R  
Sbjct: 516 FSEM-----------------IASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREY 558

Query: 535 -LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGE------- 585
            +   +     ++D+  + G  + A+R    MP +     W  ++ A   H +       
Sbjct: 559 GIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFA 618

Query: 586 GQEVLE----------LLKNMVAEGSRGGEV 606
            +++ +          LL NM AE  R  +V
Sbjct: 619 AEQIFKMEHDNTGCYVLLLNMYAEARRWEDV 649



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 226/468 (48%), Gaps = 33/468 (7%)

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           +A  G ++DA  LF      D   WN ++   +    + EA+    +M   G+K D  + 
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
             V+ + + +  L+ GK+IHA  ++   + D  +V ++L+ +Y          +VF+ + 
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSD-VYVCNSLISLYMKLGCSWDAEKVFEEMP 188

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++ I  WN+MI+GY   E    +LMLF +M +  G  P+  +  S + AC    +    +
Sbjct: 189 ERDIVSWNSMISGYLALEDGFRSLMLFKEMLKF-GFKPDRFSTMSALGACSHVYSPNMGK 247

Query: 407 GIHGHAIKLGLGR-DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
            +H HA++  +   D  V  +++DMYS+ G +  ++ IF  +  R+ V+WN +I  Y   
Sbjct: 248 ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARN 307

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            +  DA +     Q M E+                +P+ ITL+ +LP C    A+ +G+ 
Sbjct: 308 SRVTDAFLCF---QKMSEQNG-------------LQPDVITLINLLPAC----AILEGRT 347

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH YA+R      +V+ +AL+DMY + G L  A  +FD +  +N+I+WN II AY  +G+
Sbjct: 348 IHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGK 407

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEP 644
               LEL + +         + P+  T  ++  A + S  +SEG  +  Y +K  YG   
Sbjct: 408 NYSALELFQKLW-----DSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYG--S 460

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +      +V +    G +EDA +  N +        +W+S++ A  +H
Sbjct: 461 NTIILNSLVHMYAMCGDLEDARKCFNHVL--LKDVVSWNSIIMAYAVH 506



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  ++ +   A+  + ++  S + PD+    ++L A A    LS G+QIHA++
Sbjct: 394 SWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYI 453

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK  YG S+  + N+LV+MY  CG D+ D  K F+ +  KD VSWNS+I      G   +
Sbjct: 454 VKSRYG-SNTIILNSLVHMYAMCG-DLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRI 511

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           ++  F  M+ S V+P+  T  S+  ACS
Sbjct: 512 SVCLFSEMIASKVDPNKSTFASLLAACS 539


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/635 (38%), Positives = 355/635 (55%), Gaps = 58/635 (9%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           + T  ++H+  + N+ L  +  +   L+  Y    E    R +FD   +K +  +N MI 
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y  N    EAL +F  M   A   P+  T   V+ AC   +       +H   +K+GL 
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCA-FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            + ++ NAL+ MY + G +  ++ + D M  RD VSWN+M+ GY   GQ  DAL + +EM
Sbjct: 170 TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 479 ------------------------------QNMEEEKNRNNVYDLDETVL------RP-- 500
                                          NM E   + N+   +  +        P  
Sbjct: 230 DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE 289

Query: 501 -------------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        KP+++T+ ++LP CG LSAL  G+ +H Y  +  L  ++++ +AL+D
Sbjct: 290 AVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLD 349

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKCGCL  AR VFD M +R+V++W  ++ AYG  G+G + + L   M+  G       
Sbjct: 350 MYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ-----N 404

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ + F+++ +ACSH+G++ +G   F  M + YGI P  +H+AC+VDL GRAG+VE+AY 
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYS 464

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I  MP E ++   W +LL ACR+H  ++IG +AA  LF L P  + +YVLLSNIY+ A 
Sbjct: 465 FIKQMPMEPNER-VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +W   M+VR  MK++G++K PG S +E   ++H FLAGD  H Q++ ++G L+ L  +M+
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + GY+P T   LH+V  E+KE  L  HSEKLAI F ILNT  GT IR+ KNLRVC DCH 
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A K ISKI SR II+RD  RFHHF NG CSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 283/610 (46%), Gaps = 87/610 (14%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPA---VLKAVAGIQDLSLGKQIHAHVVKY 106
           R    SN+FR  I+S   +    ++ + F+  A   +L    GI+ L+   ++H+ +V  
Sbjct: 9   RQILNSNKFR-GIVSSTRIRFDRLKVEVFSKEACEVILDQYPGIKTLN---KLHSKIVIN 64

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
            +     T+A  L+  Y   G      Y +FDR  EK+ V +N MI +      +  AL 
Sbjct: 65  EHLRIDPTLAIKLMRAYSAQGETSVARY-IFDRSLEKNVVFFNVMIRSYVNNNLYVEALS 123

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
            F++ML     P  +T   V  ACS L   D LR+G QVH   ++VG + N FI NAL+A
Sbjct: 124 IFQVMLSCAFNPDHYTFPCVLKACSGL---DNLRVGLQVHDAIVKVGLDTNLFIGNALVA 180

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY K G + +A+ +      RD+VSWN++V+  +Q+ +F +A+   ++M    +  D  +
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           +AS+ P                                  V  Y +   V+    +F+ +
Sbjct: 241 MASLSP----------------------------------VVCYTSLENVQYIHNMFERM 266

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           + K +  WN MI  Y  N    EA+ LF++MEE  G+ P+A T++S++PAC    A    
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE-CGMKPDAVTIASLLPACGDLSALFLG 325

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H +  K  L  +  ++NAL+DMY++ G +E ++ +FD M +RD VSW +M++ Y   
Sbjct: 326 RRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ  DA+ L  +M  ++  +N               P+SI  ++VL  C     L +G+ 
Sbjct: 386 GQGYDAVALFAKM--LDSGQN---------------PDSIAFVSVLSACSHTGLLDQGR- 427

Query: 526 IHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
              +  R M     +V      + +VD++ + G +  A      MP+  N   W  ++ A
Sbjct: 428 ---HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484

Query: 580 YGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
             +H +   G    +LL  +  + S           ++ L    + +GM  + M++ Y M
Sbjct: 485 CRVHSKMDIGLVAADLLFQLAPKQSG---------YYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 637 KDDYGIEPSP 646
           K   GI+  P
Sbjct: 536 K-KIGIKKVP 544



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 180/353 (50%), Gaps = 49/353 (13%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +N + EA+  +  M      PD++ FP VLKA +G+ +L +G Q+H  +VK G 
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             +++ + N LV MYGKCG  + +  KV D++  +D VSWNSM+A   + G++D ALE  
Sbjct: 169 D-TNLFIGNALVAMYGKCGC-LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226

Query: 169 RMMLYSNVEPSSFTLVSVA-LACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMY 227
           + M   N+   + T+ S++ + C                                    Y
Sbjct: 227 KEMDSLNLNHDAGTMASLSPVVC------------------------------------Y 250

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
             L  V     +F+    ++L+SWN +++    N    EAV    QM   G+KPD V+IA
Sbjct: 251 TSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIA 310

Query: 288 SVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           S+LPAC  L  L  G+ +H Y     LR ++L++N     AL+DMY  C  +E  R VFD
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLEN-----ALLDMYAKCGCLEEARDVFD 365

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  + +  W +M++ YG++    +A+ LF KM + +G  P++    SV+ AC
Sbjct: 366 KMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD-SGQNPDSIAFVSVLSAC 417


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/645 (38%), Positives = 377/645 (58%), Gaps = 36/645 (5%)

Query: 246 RDLVSWNTIVSSLSQND--KFLEAVMFLRQMA--LRG--IKPDGVSIASVLPACSHLEML 299
           R L S    VS  S+++  KF    + LR  +  L G  I  D     ++L  C+  ++L
Sbjct: 17  RRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLL 76

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+ +HA+ L++ I   +  +G+ L++MY  C  +E  R+VF+ +  +    W  +I+G
Sbjct: 77  IQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q++   +AL+ F +M    G  PN  T+SSV+ A            +HG  +K G   
Sbjct: 136 YSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           + +V +AL+D+Y+R G ++ ++ +FD +E R+ VSWN +I G+        AL L + M 
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM- 253

Query: 480 NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
                             LR   +P+  +  ++   C +   L +GK +HAY I++    
Sbjct: 254 ------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
               G+ L+DMYAK G ++ AR++FD +  R+V++WN ++ AY  HG G+E +   + M 
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G     ++PNE++F+++  ACSHSG++ EG   +  MK D GI P   HY  VVDLLG
Sbjct: 356 RVG-----IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG +  A + I  MP E   A  W +LL ACR+H+N E+G  AA+++F L+PD    +V
Sbjct: 410 RAGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           +L NIY+S   W+ A  VRKKMKE GV+KEP CSW+E  + IH F+A D  H Q E++  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
             E +  ++++ GYVPDTS V+ +V+++E+E  L  HSEK+A+AF +LNTPPG+TI + K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           N+RVC DCH A K  SK+  REII+RD  RFHHFK+G CSC DYW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 229/437 (52%), Gaps = 22/437 (5%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
            SLP P S+    +S  ESL+  +     R    S  ++  S I  D   +  +LK    
Sbjct: 20  NSLPAPVSE----DSEDESLKFPSNDLLLRT---SSNDLEGSYIPADRRFYNTLLKKCTV 72

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
            + L  G+ +HAH+++  +    + + NTL+NMY KCGS + +  KVF+++ ++D V+W 
Sbjct: 73  FKLLIQGRIVHAHILQSIF-RHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWT 130

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           ++I+   +  +   AL  F  ML     P+ FTL SV  A +  + R G   G Q+HG  
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGC-CGHQLHGFC 187

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           ++ G + N  + +AL+ +Y + G +DDA+ +F + E R+ VSWN +++  ++     +A+
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN-DILIDNSFVGSALVD 327
              + M   G +P   S AS+  ACS    L+ GK +HAY +++ + L+  +F G+ L+D
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLD 305

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +   R++FD ++ + +  WN+++T Y Q+ + +EA+  F +M  V G+ PN  
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEI 364

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           +  SV+ AC  S      EG H + +  K G+  + +    ++D+  R G +  +    +
Sbjct: 365 SFLSVLTACSHSGLL--DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422

Query: 446 DMEVRDTVS-WNTMITG 461
           +M +  T + W  ++  
Sbjct: 423 EMPIEPTAAIWKALLNA 439



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 21/384 (5%)

Query: 202 GRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR VH + L+    +  +M N L+ MYAK G +++A+ +F+    RD V+W T++S  SQ
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           +D+  +A++F  QM   G  P+  +++SV+ A +       G ++H + ++      N  
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDSNVH 197

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VGSAL+D+Y     ++  + VFD +  +    WNA+I G+ +    E+AL LF  M    
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR-D 256

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G  P+  + +S+  AC  +      + +H + IK G     +  N L+DMY++ G I  +
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + IFD +  RD VSWN+++T Y   G   +A+    EM+ +                   
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-----------------I 359

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +PN I+ ++VL  C     L +G   +    ++ +  +      +VD+  + G LN A R
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 561 VFDLMPVR-NVITWNVIIMAYGMH 583
             + MP+      W  ++ A  MH
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/709 (36%), Positives = 392/709 (55%), Gaps = 30/709 (4%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE--WNTFIMNALMAMYAKLGRVDD 235
           P    L+   L  + LSR     LGR VH + LR  +    +F+ N L+ MY+KL   + 
Sbjct: 4   PRPPNLLGSFLESAVLSRSS--LLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNS 61

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +      R +V+W +++S    N +F  A++    M    + P+  +   V  A + 
Sbjct: 62  AQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASAS 121

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L M  TGK++HA AL+   ++D  FVG +  DMY         R +FD +  + +A WNA
Sbjct: 122 LHMPVTGKQLHALALKGGNILD-VFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNA 180

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
            ++   Q+    +A+  F K   V G  PNA T  + + AC    +      +HG  ++ 
Sbjct: 181 YMSNAVQDGRCLDAIAAFKKFLCVDG-EPNAITFCAFLNACADIVSLELGRQLHGFIVRS 239

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQHGDALM 473
               D  V N L+D Y + G I  S+ +F  +    R+ VSW +++              
Sbjct: 240 RYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAAL----------- 288

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
               +QN EEE+         + V   +P    + +VL  C  L  L  G+ +HA A++ 
Sbjct: 289 ----VQNHEEERACMVFLQARKEV---EPTDFMISSVLSACAELGGLELGRSVHALALKA 341

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            +  ++ VGSALVD+Y KCG + +A +VF  MP RN++TWN +I  Y   G+    L L 
Sbjct: 342 CVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLF 401

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           + M + GS G  +  + VT +++ +ACS +G V  G+ +F  M+  YGIEP  +HYACVV
Sbjct: 402 QEMTS-GSCG--IALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVV 458

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLLGR+G V+ AY+ I  MP        W +LLGAC++H   ++G+IAA+ LF L+PD +
Sbjct: 459 DLLGRSGLVDRAYEFIKRMPI-LPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDS 517

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
            ++V+ SN+ +SA  W++A  VRK+M+++G++K  G SW+   + +H F A D  H+++ 
Sbjct: 518 GNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNS 577

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           ++   L  L   M+K GYVPD +  L ++ EEEK + +  HSEK+A+AFG++  P G  I
Sbjct: 578 EIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPI 637

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R+ KNLR+C DCH A KFISKI  REII+RD  RFH FK+G CSC DYW
Sbjct: 638 RITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 224/454 (49%), Gaps = 28/454 (6%)

Query: 28  TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV 87
            +  L L  +  R   +W   +     + +F  A+L +  M R  + P++F FP V KA 
Sbjct: 60  NSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKAS 119

Query: 88  AGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS 147
           A +     GKQ+HA  +K G  +  V V  +  +MY K G    +   +FD +  ++  +
Sbjct: 120 ASLHMPVTGKQLHALALK-GGNILDVFVGCSAFDMYSKTGLRP-EARNMFDEMPHRNLAT 177

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN+ ++   + G+   A+ AF+  L  + EP++ T  +   AC+++     L LGRQ+HG
Sbjct: 178 WNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIV---SLELGRQLHG 234

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKF 264
             +R     +  + N L+  Y K G +  ++ +F       R++VSW +++++L QN + 
Sbjct: 235 FIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEE 294

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
             A M   Q A + ++P    I+SVL AC+ L  L+ G+ +HA AL+  +  +N FVGSA
Sbjct: 295 ERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVE-ENIFVGSA 352

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE-VAGLW 383
           LVD+Y  C  +E   +VF  + ++ +  WNAMI GY      + AL LF +M     G+ 
Sbjct: 353 LVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIA 412

Query: 384 PNATTMSSVVPACVRSEA-------FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            +  T+ SV+ AC R+ A       F    G +G    +  G + Y    ++D+  R G 
Sbjct: 413 LSYVTLVSVLSACSRAGAVERGLQIFESMRGRYG----IEPGAEHYA--CVVDLLGRSGL 466

Query: 437 IEISKTIFDDMEVRDTVS-WNTMITGYTICGQHG 469
           ++ +      M +  T+S W  ++     C  HG
Sbjct: 467 VDRAYEFIKRMPILPTISVWGALLGA---CKMHG 497


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 295/859 (34%), Positives = 467/859 (54%), Gaps = 69/859 (8%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ--DLSL 95
           Q +   SW   +   +++   R A   +  M     +P  + F +++     +   D+ L
Sbjct: 167 QVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRL 226

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            +QI   + K G+ L+ + V + LV+ + K GS +    K+F+++  ++ V+ N ++  L
Sbjct: 227 LEQIMCTIQKSGF-LTDLFVGSGLVSAFAKSGS-LIHARKIFNQMETRNAVTLNGLMVGL 284

Query: 156 CRFGKWDLALEAFRMMLYSN----VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
            R  KW    EA ++ +  N    V P S+ ++  +    +L+   GL+ GR+VHG+ + 
Sbjct: 285 VR-QKW--GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341

Query: 212 VG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            G  ++   I N L+ MYAK G + DA+ +F    ++D VSWN++++ L QN  F+EAV 
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVE 401

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             + M    I P   ++ S + +C+ L+    G++IH  +L+  I ++ S V +AL+ +Y
Sbjct: 402 RYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLY 460

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD-EEALMLFIKMEEVAGLWPNATT 388
                +   R++F  + +     WN++I     +E    EA+  F+     AG   N  T
Sbjct: 461 AETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALR-AGQKLNRIT 519

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM- 447
            SSV+ A          + IHG A+K  +  +   +NAL+  Y + G ++  + IF  M 
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMS 579

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
           E RD V+WN+MI+GY     H + L            K  + V+ + +T  R   +S   
Sbjct: 580 ERRDDVTWNSMISGYI----HNELL-----------AKALDLVWFMMQTGQR--LDSFMY 622

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            TVL    +++ L +G E+HA ++R  L +DVVVGSALVDMY+KCG L++A R F+ MP 
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP- 681

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
                                   L  NM  +    G+  P+ VTF+ + +ACSH+G++ 
Sbjct: 682 ------------------------LFANMKLD----GQTPPDHVTFVGVLSACSHAGLLE 713

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           EG   F  M D YG+ P  +H++C+ DLLGRAG+++     I  MP +      W ++LG
Sbjct: 714 EGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMK-PNVLIWRTVLG 772

Query: 688 A-CRIH-QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           A CR + +  E+G+ AA+ LF LEP+ A +YVLL N+Y++   W+  +  RKKMK+  V+
Sbjct: 773 ACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 832

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           KE G SW+   D +H F+AGD SH  ++ ++  L+ L+ +MR  GYVP T   L+++ +E
Sbjct: 833 KEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQE 892

Query: 806 EKETLLCGHSEKLAIAFGILNTPPGTT--IRVAKNLRVCNDCHQATKFISKIESREIILR 863
            KE +L  HSEKLA+AF +L     +T  IR+ KNLRVC DCH A K ISKIE R+IILR
Sbjct: 893 NKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILR 951

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF++G CSC D+W
Sbjct: 952 DSNRFHHFQDGECSCSDFW 970



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 275/603 (45%), Gaps = 43/603 (7%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K  H+ + K G     V + N L+N Y + G D     KVFD +  ++ VSW  +++  
Sbjct: 20  AKLFHSRLYKNGLE-KDVYLCNNLINAYLETG-DSVSARKVFDEMPLRNCVSWACVVSGY 77

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R G+   AL   R M+   V  + +  VS   AC  L    G+  GRQ+HG   ++   
Sbjct: 78  SRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSV-GILFGRQIHGLLFKLSYA 136

Query: 215 WNTFIMNALMAMYAKL-GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
            +  + N L++MY K  G +  A   F   + ++ VSWN+I+S  SQ      A      
Sbjct: 137 VDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYS 196

Query: 274 MALRGIKPDGVSIAS-VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           M   G +P   +  S V  ACS  E      E     ++    + + FVGS LV  +   
Sbjct: 197 MQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKS 256

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA-TTMSS 391
             +   R++F+ +  +     N ++ G  + ++ EEA  LF+ M  +  + P +   + S
Sbjct: 257 GSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316

Query: 392 VVPACVRSEAFPDKEG--IHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDME 448
             P    +E    K+G  +HGH I  GL      + N L++MY++ G I  ++ +F  M 
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMT 376

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D+VSWN+MITG     Q+   +  +   Q+M     R+ +           P S TL+
Sbjct: 377 EKDSVSWNSMITGLD---QNSCFIEAVERYQSMR----RHEIL----------PGSFTLI 419

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           + +  C +L     G++IH  +++  +  +V V +AL+ +YA+ GCLN  R++F  MP  
Sbjct: 420 SSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEH 479

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS----- 623
           + ++WN II   G     +  L           R G+ K N +TF ++ +A S       
Sbjct: 480 DQVSWNSII---GALASSERSLPEAVACFLNALRAGQ-KLNRITFSSVLSAVSSLSFGEL 535

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G    G+ L Y + D+   E +      ++   G+ G+++   ++ + M    D    W+
Sbjct: 536 GKQIHGLALKYNIADEATTENA------LIACYGKCGEMDGCEKIFSRMSERRDDV-TWN 588

Query: 684 SLL 686
           S++
Sbjct: 589 SMI 591



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 223/486 (45%), Gaps = 39/486 (8%)

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E + ++ N L+  Y + G    A+ +F     R+ VSW  +VS  S+N +  EA++FLR 
Sbjct: 33  EKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRD 92

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDT--GKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           M   G+  +  +  S L AC  L+ +    G++IH    +    +D + V + L+ MY  
Sbjct: 93  MVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVD-AVVSNVLISMYWK 151

Query: 332 C-REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
           C   +    R FD +  K    WN++I+ Y Q      A  +F  M +  G  P   T  
Sbjct: 152 CGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSM-QCDGSRPTEYTFG 210

Query: 391 SVV-PACVRSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           S+V  AC  +E  PD    E I     K G   D +V + L+  +++ G +  ++ IF+ 
Sbjct: 211 SLVTTACSLTE--PDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQ 268

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-I 505
           ME R+ V+ N ++ G        +A  L  +M +M                +   P S +
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM----------------IDVSPESYV 312

Query: 506 TLMTVLP--GCGALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVF 562
            L++  P         L KG+E+H + I   L   +V +G+ LV+MYAKCG +  ARRVF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
             M  ++ ++WN +I     +    E +E  ++M     R  E+ P   T I+  ++C+ 
Sbjct: 373 CFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSM-----RRHEILPGSFTLISSISSCAS 427

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
                 G  + +      GI+ +      ++ L    G + +  ++ + M PE D+  +W
Sbjct: 428 LKWAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSM-PEHDQV-SW 484

Query: 683 SSLLGA 688
           +S++GA
Sbjct: 485 NSIIGA 490


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/767 (33%), Positives = 424/767 (55%), Gaps = 31/767 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++   R++I  + +M   +IQ D   F  VLKA  GI+D  LG Q+H   
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  S V     LV+MY  C   +   + +F  + E++ V W+++IA   R  ++  
Sbjct: 197 IQMGFD-SDVVTGTALVDMYSTC-KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L+ +++ML   +  S  T  S   +C+ LS      LG Q+H  +L+    ++  +  A
Sbjct: 255 GLKLYKVMLDEGMGVSQATFASAFRSCAGLS---AFELGTQLHAYALKTNFGYDNIVGTA 311

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK  R+ DA+ +F +F +    S N ++   ++ D+ LEA+   R +    +  D
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++  L ACS ++    G ++H  A++  +   N  V + ++DMY  C  +     +F
Sbjct: 372 EISLSGALTACSAIKGYLEGIQLHGLAVKCGLDF-NICVANTILDMYAKCGALMEACLIF 430

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  K    WNA+I  + QNE+ EE L LF+ M   + + P+  T  SVV AC   +A 
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLR-STMEPDDYTFGSVVKACAGKKAL 489

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +HG  IK G+G D +V +A++DMY + G +  ++ I + +E R TVSWN++I+G+
Sbjct: 490 NYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGF 549

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           +   Q  +AL     M              L   V+   P++ T  TVL  C  L+ +  
Sbjct: 550 SSEKQGENALSYFSRM--------------LQVGVI---PDNFTYATVLDICANLATVEL 592

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IH   ++  L +DV + S +VDMY+KCG +  +R +F+  P R+ +TW+ +I AY  
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAY 652

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G++ ++L + M  +      VKPN   FI++  AC+H G V +G+  F +M+  YG+
Sbjct: 653 HGLGEDAIKLFEEMQLQN-----VKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGL 707

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HY+C+VDLLGR+G+V +A +LI  MP E D    W +LLG CR+  NVE+ E AA
Sbjct: 708 DPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDV-IWRTLLGICRLQGNVEVAEKAA 766

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            +L  L+P  +S YVLLSN+Y+ A +W +   +R  MK   ++KEPGCSWI+  DE+H F
Sbjct: 767 NSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAF 826

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           L GD +H +SE+++     L + M+ +GYVP+    L +   +E+++
Sbjct: 827 LVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDS 873



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 179/703 (25%), Positives = 330/703 (46%), Gaps = 79/703 (11%)

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--------- 128
             F  + +  + ++ ++ GKQ HA +   G+ + +V V+N L+  Y KC +         
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGF-VPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 129 ---------------------DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
                                +M     +FD + E+D VSWNSM++   + G    ++E 
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           F  M    ++    T   V  AC+ +   +   LG QVH  ++++G + +     AL+ M
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGI---EDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y+   ++D A  +F    +R+ V W+ +++   +ND+F E +   + M   G+     + 
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF 274

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS   +C+ L   + G ++HAYAL+ +   DN  VG+A +DMY  C  +   R+VF+   
Sbjct: 275 ASAFRSCAGLSAFELGTQLHAYALKTNFGYDN-IVGTATLDMYAKCDRMVDARKVFNTFP 333

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +      NA+I GY + +   EAL +F  +++ + L  +  ++S  + AC   + + +  
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQK-SYLDFDEISLSGALTACSAIKGYLEGI 392

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +HG A+K GL  +  V N ++DMY++ G +  +  IFDDME++D VSWN +I  +    
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH---- 448

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGK 524
                          E+ ++      L  ++LR   +P+  T  +V+  C    AL  G 
Sbjct: 449 ---------------EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGM 493

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           E+H   I++ +  D  VGSA++DMY KCG L  A ++ + +  R  ++WN II  +    
Sbjct: 494 EVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEK 553

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
           +G+  L     M+  G     V P+  T+  +   C++   V  G  +  ++     ++ 
Sbjct: 554 QGENALSYFSRMLQVG-----VIPDNFTYATVLDICANLATVELGKQIHGQI---LKLQL 605

Query: 645 SPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             D Y  + +VD+  + G ++D+  +    P        WS+++ A   H    +GE A 
Sbjct: 606 HSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKR--DYVTWSAMICAYAYHG---LGEDAI 660

Query: 703 QNLF---LLEPDVASHYVLLSNIYSSAQLW--DKAMDVRKKMK 740
           + LF    L+    +H + +S + + A +   DK +   ++M+
Sbjct: 661 K-LFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMR 702



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 8/221 (3%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   SW   +   +   Q   A+  +  M +  + PDNF +  VL   A +  + LGK
Sbjct: 535 EERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGK 594

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QIH  ++K     S V +A+T+V+MY KCG +M D   +F++  ++D V+W++MI     
Sbjct: 595 QIHGQILKLQLH-SDVYIASTIVDMYSKCG-NMQDSRIMFEKAPKRDYVTWSAMICAYAY 652

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWN 216
            G  + A++ F  M   NV+P+    +SV  AC+++   D GL   R++  +     +  
Sbjct: 653 HGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQME 712

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIV 255
            +  + ++ +  + G+V++A  L +S  FE  D++ W T++
Sbjct: 713 HY--SCMVDLLGRSGQVNEALELIESMPFEADDVI-WRTLL 750


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/767 (33%), Positives = 421/767 (54%), Gaps = 32/767 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   L    ++ + R++I  +++M RS+ +  D   F  VLKA + ++D  LG Q+H  
Sbjct: 142 SWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGL 201

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +V+ G+    V   + L++MY KC   + D  K+F  I  K+ V W+++IA   +  +  
Sbjct: 202 IVRMGF-YKDVVTGSALLDMYAKC-KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHI 259

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-N 221
           L LE F+ M    +  S     SV  +C+ LS    L++G Q+H ++L+    +   +  
Sbjct: 260 LGLELFKEMQKVGIGVSQSIYASVFRSCAGLS---ALKVGTQLHAHALKCDFGSDITVGT 316

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A + MYAK G + DA+ +F S     L  +N I+    +N+K  EA+ F + +   G+  
Sbjct: 317 ATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + +S++    AC+ ++    G+++H+ ++++  L  N  V ++++DMY  C  +     +
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKS-TLRSNICVANSILDMYGKCEALSEACCM 435

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  +    WNA+I  + QN  +EE L LF  M  +  + P+  T  SV+ AC   +A
Sbjct: 436 FDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLR-MEPDQFTYGSVLKACSSQQA 494

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IH   IK GLG D +V  AL+DMY + G IE +K I D +E +  VSWN +I G
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAG 554

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +T+     DA     EM  M                   KP++ T   VL  C  L+++ 
Sbjct: 555 FTLLKHSEDAHSFFYEMLKMS-----------------VKPDNFTYAIVLDACANLASVG 597

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK+IH   I+  L +DV + S LVDMY+KCG +  +  VF+  P ++ +TWN +I  Y 
Sbjct: 598 LGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYA 657

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG G+E L   + M  E      V+PN  TF+++  AC+H G + +G+  F  M  +YG
Sbjct: 658 QHGLGEEALGYFERMQLEN-----VRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYG 712

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           +EP  +HY+C++D++GR+G++ +A +LI  MP E D A  W +LL  C+IH N+EI E A
Sbjct: 713 LEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEAD-AVIWRTLLSICKIHGNIEIAEKA 771

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
              +  LEP+ +S  +LLSNIY+ A +W K  ++RK M+   ++KEPGCSWIE  DE+H 
Sbjct: 772 TNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHA 831

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           FL G+ +H + E+++  L  L + M+  GY+PD   ++   +EE ++
Sbjct: 832 FLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDFLIDEESEEYEQ 878



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 307/651 (47%), Gaps = 67/651 (10%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           F    +S ++  ++ +      F  +++  +    L  GKQ HA ++  G+ +  V ++N
Sbjct: 24  FTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGF-IPDVYISN 82

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQ-------------------------------V 146
            L+ MY +C S +   YKVF++++++D                                V
Sbjct: 83  CLMKMYLRC-SHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVV 141

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQV 205
           SWNSM++   + G+   +++ F  M  S  V     T   V  ACS L   DG  LG QV
Sbjct: 142 SWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVL--EDG-GLGIQV 198

Query: 206 HGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           HG  +R+G +   +  +AL+ MYAK  R+DD+  +F     ++ V W+ I++   QND+ 
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
           +  +   ++M   GI       ASV  +C+ L  L  G ++HA+AL+ D   D + VG+A
Sbjct: 259 ILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDIT-VGTA 317

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
            +DMY  C  +   +R+F+ +    +  +NA+I G  +NE   EAL  F ++   +GL  
Sbjct: 318 TLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFF-QLLLKSGLGF 376

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  ++S    AC   +   D   +H  ++K  L  +  V N+++DMY +   +  +  +F
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMF 436

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D+ME RD VSWN +I  +   G   + L L   M                   LR +P+ 
Sbjct: 437 DEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLR-----------------LRMEPDQ 479

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T  +VL  C +  AL  G EIH   I++ L  D  VG AL+DMY KCG +  A+++ D 
Sbjct: 480 FTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDR 539

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  + +++WN II  + +    ++       M+        VKP+  T+  +  AC++  
Sbjct: 540 IEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMS-----VKPDNFTYAIVLDACANLA 594

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMP 673
            V  G  +  ++     +E   D Y  + +VD+  + G ++D+  +    P
Sbjct: 595 SVGLGKQIHGQI---IKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/712 (36%), Positives = 396/712 (55%), Gaps = 28/712 (3%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRD 247
           S + R   LR  +Q HG+ +R G + + +  + L AM A      ++ A+ +F      +
Sbjct: 35  SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94

Query: 248 LVSWNTIVSSLSQN-DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
             +WNT++ + +   D  L    FL  ++     P+  +   ++ A + +  L  G+ +H
Sbjct: 95  SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
             A+++ +  D  FV ++L+  Y +C +++   +VF  I +K +  WN+MI G+ Q    
Sbjct: 155 GMAVKSAVGSD-VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           ++AL LF KME    +  +  TM  V+ AC +         +  +  +  +  +  + NA
Sbjct: 214 DKALELFKKMES-EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME---- 482
           ++DMY++ G IE +K +FD ME +D V+W TM+ GY I   +  A  +L  M   +    
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 483 -------EEKNRNN----VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
                  E+  + N    V+   +     K N ITL++ L  C  + AL  G+ IH+Y  
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++ +  +  V SAL+ MY+KCG L  +R VF+ +  R+V  W+ +I    MHG G E ++
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           +   M     +   VKPN VTF  +F ACSH+G+V E   LF++M+ +YGI P   HYAC
Sbjct: 453 MFYKM-----QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           +VD+LGR+G +E A + I  MP        W +LLGAC+IH N+ + E+A   L  LEP 
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIP-PSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
               +VLLSNIY+    W+   ++RK M+  G++KEPGCS IE    IH+FL+GD +H  
Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 626

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPG 830
           SE+++G L  + E+++  GY P+ S VL  + EEE KE  L  HSEKLAI +G+++T   
Sbjct: 627 SEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 686

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IRV KNLRVC DCH   K IS++  REII+RD  RFHHF+NG CSC D+W
Sbjct: 687 KVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 241/494 (48%), Gaps = 54/494 (10%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM- 68
           L     LSS  + +        +P P S      +W   +R+ A       +I ++++M 
Sbjct: 68  LFAMAALSSFASLEYARKVFDEIPKPNSF-----AWNTLIRAYASGPDPVLSIWAFLDMV 122

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           + S   P+ + FP ++KA A +  LSLG+ +H   VK   G S V VAN+L++ Y  CG 
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCG- 180

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           D+    KVF  I EKD VSWNSMI    + G  D ALE F+ M   +V+ S  T+V V  
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240

Query: 189 ACSNLSRRDGLRLGRQV----HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           AC+ +     L  GRQV      N + V   N  + NA++ MY K G ++DAK LF + E
Sbjct: 241 ACAKIR---NLEFGRQVCSYIEENRVNV---NLTLANAMLDMYTKCGSIEDAKRLFDAME 294

Query: 245 D-------------------------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           +                               +D+V+WN ++S+  QN K  EA++   +
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354

Query: 274 MAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           + L + +K + +++ S L AC+ +  L+ G+ IH+Y  ++ I + N  V SAL+ MY  C
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSALIHMYSKC 413

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            ++E  R VF+ +  + + +W+AMI G   +    EA+ +F KM+E A + PN  T ++V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE-ANVKPNGVTFTNV 472

Query: 393 VPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
             AC  +    + E + H      G+  +      ++D+  R G +E +    + M +  
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532

Query: 452 TVS-WNTMITGYTI 464
           + S W  ++    I
Sbjct: 533 STSVWGALLGACKI 546


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/701 (37%), Positives = 383/701 (54%), Gaps = 63/701 (8%)

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
           L C N S    L   RQ H + L+ G +N T +   L++ YA      DA  +     + 
Sbjct: 19  LNCLN-STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP 77

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           ++ S++T++ + S+  +F  A+    QM  RG+ PD   + S + AC+ L  L   +++H
Sbjct: 78  NVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVH 137

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI----AL---------- 352
             A  +    D SFV S+LV MY  C ++    RVFD + +  +    AL          
Sbjct: 138 GIASVSGFDSD-SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCV 196

Query: 353 ---------------------WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
                                WN MI G+  +    EA+++F+ M  + G  P+ TT+SS
Sbjct: 197 DEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH-LRGFEPDGTTISS 255

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+PA    E       IHG+ IK GL  D+ V +AL+DMY +         +FD M+  D
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN-----------RNNVYDLDE----- 495
             S N  I G +  GQ   +L L R++++   E N             N  D++      
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFR 375

Query: 496 --TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
              +   KPNS+T+  +LP CG ++AL  GK  H +++R  ++TDV VGSAL+DMYAKCG
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCG 435

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  +R  FD +P +N++ WN +I  Y MHG+ +E +E+   M     R G+ KP+ ++F
Sbjct: 436 RIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM----QRSGQ-KPDIISF 490

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             + +ACS SG+  EG   F  M   YGIE   +HYAC+V LL RAGK+E AY +I  MP
Sbjct: 491 TCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMP 550

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
              D A  W +LL +CR+H NV +GE+AA+ LF LEP    +Y+LLSNIY+S  +W++  
Sbjct: 551 VNPD-ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVN 609

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VR  MK  G+RK PGCSWIE  +++H  LAGD SH Q  Q+   L+ LS  M+K GY P
Sbjct: 610 RVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFP 669

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           + + VL +V E++KE +LCGHSEKLA+ FG+LNTPPG  ++
Sbjct: 670 EINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 259/564 (45%), Gaps = 97/564 (17%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           LS  +Q HAH++K G   +   +A  L++ Y        D   V D + E +  S++++I
Sbjct: 29  LSQTRQAHAHILKTGL-FNDTHLATKLLSHYAN-NMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----- 207
               +F ++  AL  F  ML   + P +  L S   AC+ LS    L+  RQVHG     
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS---ALKPARQVHGIASVS 143

Query: 208 ---------NSL------------------RVGEWNTFIMNALMAMYAKLGRVDDAKTLF 240
                    +SL                  R+ E +    +AL+A YA+ G VD+AK LF
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203

Query: 241 KSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
               D     +L+SWN +++  + +  + EAV+    M LRG +PDG +I+SVLPA   L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCR--------------------- 333
           E L  G  IH Y ++   L+ +  V SAL+DMY  C+C                      
Sbjct: 264 EDLVMGILIHGYVIKQG-LVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAF 322

Query: 334 --------EVECGRRVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                   +VE   R+F  + D+ + L    W +MI    QN  D EAL LF +M ++AG
Sbjct: 323 IFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAG 381

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + PN+ T+  ++PAC    A    +  H  +++ G+  D YV +AL+DMY++ GRI+ S+
Sbjct: 382 VKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASR 441

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
             FD +  ++ V WN +I GY + G+  +A+ +   MQ   +                 K
Sbjct: 442 ICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ-----------------K 484

Query: 502 PNSITLMTVLPGCGALSALAKGK-EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           P+ I+   VL  C       +G    ++ + +  +   V   + +V + ++ G L  A  
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544

Query: 561 VFDLMPVR-NVITWNVIIMAYGMH 583
           +   MPV  +   W  ++ +  +H
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVH 568



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 82/482 (17%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           ++ +QF  A+ ++ +M    + PDN   P+ +KA AG+  L   +Q+H      G+   S
Sbjct: 90  SKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDS 149

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM- 171
             V ++LV+MY KC + + D ++VFDR+ E D VSW++++A   R G  D A   F  M 
Sbjct: 150 F-VQSSLVHMYIKC-NQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMG 207

Query: 172 ----------------------LYSNV------------EPSSFTLVSVALACSNLSRRD 197
                                 LYS              EP   T+ SV  A  +L   +
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL---E 264

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL-------------------------- 230
            L +G  +HG  ++ G   +  + +AL+ MY K                           
Sbjct: 265 DLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIF 324

Query: 231 -----GRVDDAKTLFKSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                G+V+ +  LF+  +D+    ++VSW ++++  SQN + +EA+   R+M + G+KP
Sbjct: 325 GLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKP 384

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I  +LPAC ++  L  GK  H ++LR  I  D  +VGSAL+DMY  C  ++  R  
Sbjct: 385 NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTD-VYVGSALIDMYAKCGRIQASRIC 443

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I  K +  WNA+I GY  +   +EA+ +F  M+  +G  P+  + + V+ AC +S  
Sbjct: 444 FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQR-SGQKPDIISFTCVLSACSQS-G 501

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTM 458
             ++   + +++    G +  V++   ++ + SR G++E +  +   M V  D   W  +
Sbjct: 502 LTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGAL 561

Query: 459 IT 460
           ++
Sbjct: 562 LS 563



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 39/294 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     S  + EA+L +++M     +PD     +VL AV  ++DL +G  IH +V
Sbjct: 217 SWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRI--------------------- 140
           +K G  +S   V++ L++MYGKC   S+M  V+   D +                     
Sbjct: 277 IKQGL-VSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335

Query: 141 -----TEKDQ------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
                  KDQ      VSW SMIA   + G+   ALE FR M  + V+P+S T+  +  A
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPA 395

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C N++    L  G+  H  SLR G   + ++ +AL+ MYAK GR+  ++  F     ++L
Sbjct: 396 CGNIA---ALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           V WN +++  + + K  EA+     M   G KPD +S   VL ACS   + + G
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 37/250 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++ +  EA+  + EM  + ++P++   P +L A   I  L  GK  H   
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   + V V + L++MY KCG  +      FD I  K+ V WN++IA     GK   
Sbjct: 413 LRRGIS-TDVYVGSALIDMYAKCGR-IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKE 470

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+E F +M  S  +P   +   V  ACS    + GL              E  ++  N++
Sbjct: 471 AMEIFDLMQRSGQKPDIISFTCVLSACS----QSGLT-------------EEGSYYFNSM 513

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            + Y    RV+                +  +V+ LS+  K  +A   +R+M    + PD 
Sbjct: 514 SSKYGIEARVEH---------------YACMVTLLSRAGKLEQAYAMIRRMP---VNPDA 555

Query: 284 VSIASVLPAC 293
               ++L +C
Sbjct: 556 CVWGALLSSC 565


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/747 (36%), Positives = 383/747 (51%), Gaps = 113/747 (15%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD++ E+D VSWN+M++   + G    A E F  M   N    +  L   A    N   
Sbjct: 52  LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGML---AAYVQNGRI 108

Query: 196 RDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
            D  RL            +W     N +M  Y K  R+ DA+ +F    +RD VSWNT++
Sbjct: 109 EDARRLFESK-------ADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMI 161

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S  +QN + LEA     +  +R +                                    
Sbjct: 162 SGYAQNGELLEAQRLFEESPVRDV------------------------------------ 185

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
               F  +A+V  Y     ++  RRVFD + +K    WNA+I GY Q +  ++A  LF  
Sbjct: 186 ----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF-- 239

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
                                   EA P               ++    N ++  Y++ G
Sbjct: 240 ------------------------EAMP--------------CQNVSSWNTMITGYAQNG 261

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            I  ++  FD M  RD++SW  +I GY   G   +AL L  EM+   E  NR+       
Sbjct: 262 DIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS------- 314

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                     T  + L  C  ++AL  GK++H   ++  L +   VG+AL+ MY KCG +
Sbjct: 315 ----------TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNI 364

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A  VF+ +  + V++WN +I  Y  HG G+E L L ++M   G     + P++VT + 
Sbjct: 365 DDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG-----ILPDDVTMVG 419

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           + +ACSH+G+V +G + FY M  DYGI  +  HY C++DLLGRAG+++DA  L+  MP E
Sbjct: 420 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 479

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            D A  W +LLGA RIH N E+GE AA+ +F +EPD +  YVLLSN+Y+++  W     +
Sbjct: 480 PD-AATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRM 538

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           R +M++ GV+K PG SW+E  ++IH F  GD  H + ++++ FLE L  +M+KEGYV  T
Sbjct: 539 RLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSST 598

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
             VLH+V EEEK  +L  HSEKLA+AFGIL  P G  IRV KNLRVC DCH A K ISKI
Sbjct: 599 KLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKI 658

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             R IILRD  RFHHF  G CSCGDYW
Sbjct: 659 VGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 223/525 (42%), Gaps = 105/525 (20%)

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V   N +++ Y + G  + +  ++FD +  K+ +SWN M+A   + G+    +E  R + 
Sbjct: 61  VVSWNAMLSGYAQNGY-VKEAKEIFDEMPCKNSISWNGMLAAYVQNGR----IEDARRLF 115

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGR 232
            S                                       +W     N +M  Y K  R
Sbjct: 116 ESKA-------------------------------------DWELISWNCMMGGYVKRNR 138

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           + DA+ +F    +RD VSWNT++S  +QN + LEA     +  +R    D  +  +++  
Sbjct: 139 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSG 194

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
                MLD  + +      + +   NS   +A++  Y  C+ ++  R +F+ +  + ++ 
Sbjct: 195 YVQNGMLDEARRVF-----DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS 249

Query: 353 WNAMITGYGQN-------------------------------EYDEEALMLFIKMEEVAG 381
           WN MITGY QN                                Y EEAL LF++M+   G
Sbjct: 250 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKR-DG 308

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
              N +T +S +  C    A    + +HG  +K GL    YV NAL+ MY + G I+ + 
Sbjct: 309 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAY 368

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F+ +E ++ VSWNTMI GY   G   +ALML   M+                 +L   
Sbjct: 369 IVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKT--------------GIL--- 411

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARR 560
           P+ +T++ VL  C     + KG E      ++  +  +    + ++D+  + G L+ A+ 
Sbjct: 412 PDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQN 471

Query: 561 VFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
           +   MP   +  TW  ++ A  +HG    G++  +++  M  + S
Sbjct: 472 LMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNS 516



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 11/272 (4%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V+  NT++  Y + G D+      FDR+ ++D +SW ++IA   + G  + AL  F  M
Sbjct: 246 NVSSWNTMITGYAQNG-DIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 304

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
                  +  T  S    C+ ++    L LG+QVHG  ++ G E   ++ NAL+ MY K 
Sbjct: 305 KRDGERLNRSTFTSTLSTCAEIA---ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC 361

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +DDA  +F+  E++++VSWNT+++  +++    EA+M    M   GI PD V++  VL
Sbjct: 362 GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVL 421

Query: 291 PACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRRVFDFIS-DK 348
            ACSH  ++D G E + Y++  D  I  NS   + ++D+      ++  + +   +  + 
Sbjct: 422 SACSHTGLVDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEP 480

Query: 349 KIALWNAMITG---YGQNEYDEEALMLFIKME 377
             A W A++     +G  E  E+A  +  +ME
Sbjct: 481 DAATWGALLGASRIHGNTELGEKAAKMIFEME 512



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 45/377 (11%)

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           R +   R +FD + ++ +  WNAM++GY QN Y +EA  +F +M        N+ + + +
Sbjct: 44  RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP-----CKNSISWNGM 98

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + A V++    D   +        L       N +M  Y +  R+  ++ IFD M  RD 
Sbjct: 99  LAAYVQNGRIEDARRLFESKADWEL----ISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD-------------LDETVL- 498
           VSWNTMI+GY    Q+G+ L    E Q + EE    +V+              LDE    
Sbjct: 155 VSWNTMISGYA---QNGELL----EAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 207

Query: 499 ---RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
               P+ NS++   ++ G      + + +E+       M   +V   + ++  YA+ G +
Sbjct: 208 FDGMPEKNSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNTMITGYAQNGDI 263

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             AR  FD MP R+ I+W  II  Y   G G+E L L   M  +G R      N  TF +
Sbjct: 264 AQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER-----LNRSTFTS 318

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
             + C+    +  G  +  ++    G+E        ++ +  + G ++DAY +   +  E
Sbjct: 319 TLSTCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNIDDAYIVFEGI--E 375

Query: 676 FDKAGAWSSLLGACRIH 692
             +  +W++++     H
Sbjct: 376 EKEVVSWNTMIAGYARH 392



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 6/216 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S    EA+  ++EM R   + +   F + L   A I  L LGKQ+H  V
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S   V N L+ MY KCG ++ D Y VF+ I EK+ VSWN+MIA   R G    
Sbjct: 340 VKAGLE-SGCYVGNALLVMYCKCG-NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKE 397

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M  + + P   T+V V  ACS+    D  +     +  +   G   N+     
Sbjct: 398 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD--KGTEYFYSMTQDYGITANSKHYTC 455

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           ++ +  + GR+DDA+ L K+   + D  +W  ++ +
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/598 (41%), Positives = 352/598 (58%), Gaps = 30/598 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL--VDMYCNCREVECGRRVFDFI 345
           S+LP C+ L  L   K++ A+A++  +  D S +   +    +      ++    +FD I
Sbjct: 25  SLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
               I L+N M  GY + +    A  LF ++   +GL+P+  T  S++ AC   +A  + 
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQIL-FSGLFPDDYTFPSLLKACASCKALEEG 140

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H  AIKLGL  + YV   L++MY+    ++ ++ +FD +     V++N MITGY   
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            +  +AL L RE+Q       RN            KP  +T+++VL  C  L AL  GK 
Sbjct: 201 SRPNEALSLFRELQA------RN-----------LKPTDVTMLSVLSSCALLGALDLGKW 243

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H Y  +N     V V +AL+DMYAKCG L+ A  VF+ M VR+   W+ +IMAY +HG 
Sbjct: 244 MHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGH 303

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G + + L K M   G+     +P+E+TF+ L  ACSH+G+V EG + FY M+D YG+ P 
Sbjct: 304 GLKAVSLFKEMRKAGT-----EPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPG 358

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY C+VDLLGRAG++E+AY+ I  +P        W +LL AC  H NVE+G+   + +
Sbjct: 359 IKHYGCMVDLLGRAGRLEEAYEFIVGLPIR-PTPILWRTLLSACGSHGNVELGKRVIEQI 417

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F L+      Y++LSN+ + A  W+    VRK M E GV K PGCS +E  + +H+F +G
Sbjct: 418 FELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSG 477

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGHSEKLAIAFGI 824
           DG H  S +LH  L+ L + ++  GYVP+TS V H ++ +EEKE  L  HSEKLAI FG+
Sbjct: 478 DGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGL 537

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LNTPPGTTIRV KNLRVC DCH A K IS I  R+IILRDV+RFHHFK+G CSC DYW
Sbjct: 538 LNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 194/397 (48%), Gaps = 24/397 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNM--YGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           KQ+ A  +K  +  S ++V    +N        + M   + +FD+I + D V +N+M   
Sbjct: 37  KQLQAFAIK-THLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARG 95

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             R      A   F  +L+S + P  +T  S+  AC++      L  GRQ+H  ++++G 
Sbjct: 96  YARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCK---ALEEGRQLHCLAIKLGL 152

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             N ++   L+ MY     +D A+ +F    +  +V++N +++  ++  +  EA+   R+
Sbjct: 153 SENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRE 212

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCN 331
           +  R +KP  V++ SVL +C+ L  LD GK +H Y  +N     N F  V +AL+DMY  
Sbjct: 213 LQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGF---NRFVKVDTALIDMYAK 269

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  ++    VF+ ++ +    W+AMI  Y  + +  +A+ LF +M + AG  P+  T   
Sbjct: 270 CGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRK-AGTEPDEITFLG 328

Query: 392 VVPACVRS----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           ++ AC  +    E F   E  +G   K G+         ++D+  R GR+E +      +
Sbjct: 329 LLYACSHTGLVEEGF---EYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGL 385

Query: 448 EVRDT-VSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +R T + W T+++    CG HG+  +  R ++ + E
Sbjct: 386 PIRPTPILWRTLLSA---CGSHGNVELGKRVIEQIFE 419



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 149/265 (56%), Gaps = 9/265 (3%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  AR++    A   + ++  S + PD++ FP++LKA A  + L  G+Q+H   +K G  
Sbjct: 94  RGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLS 153

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +V V  TL+NMY  C ++M    +VFD+I E   V++N+MI    R  + + AL  FR
Sbjct: 154 -ENVYVCPTLINMYTAC-NEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMY 227
            +   N++P+  T++SV  +C+ L     L LG+ +H    + G +N F+    AL+ MY
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLG---ALDLGKWMHEYVKKNG-FNRFVKVDTALIDMY 267

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK G +DDA  +F++   RD  +W+ ++ + + +   L+AV   ++M   G +PD ++  
Sbjct: 268 AKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFL 327

Query: 288 SVLPACSHLEMLDTGKEIHAYALRN 312
            +L ACSH  +++ G E + Y +R+
Sbjct: 328 GLLYACSHTGLVEEGFE-YFYGMRD 351



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 2/152 (1%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C  ++   +   AR ++  EA+  + E+   +++P +    +VL + A +  L LGK +H
Sbjct: 186 CVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMH 245

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V K G+    V V   L++MY KCGS + D   VF+ +  +D  +W++MI      G 
Sbjct: 246 EYVKKNGFN-RFVKVDTALIDMYAKCGS-LDDAVCVFENMAVRDTQAWSAMIMAYAIHGH 303

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              A+  F+ M  +  EP   T + +  ACS+
Sbjct: 304 GLKAVSLFKEMRKAGTEPDEITFLGLLYACSH 335


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/766 (34%), Positives = 419/766 (54%), Gaps = 31/766 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ + R++I  ++EM R  +  D  +   VLKA   +++  +G Q+H  V
Sbjct: 148 SWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLV 207

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+G+    VT  + L+ MY KC   + D   VF  + EK+ VSW++MIA   +  +   
Sbjct: 208 VKFGFDCDVVT-GSALLGMYAKC-KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVE 265

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
            LE F+ M    V  S     S+  +C+ LS    LRLG+++H ++L+    +  I+  A
Sbjct: 266 GLELFKEMQGVGVGVSQSIYASLFRSCAALS---ALRLGKELHSHALKSAFGSDIIVGTA 322

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK GR+ DA+ +  S     L S+N I+   +++D+  +A+   + +   G+  D
Sbjct: 323 TLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFD 382

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++++  L AC+ +     G+++H  A+++ I + N  V +A++DMY  C+ +     +F
Sbjct: 383 EITLSGALNACASIRGDLEGRQVHGLAVKS-ISMSNICVANAILDMYGKCKALAEASDLF 441

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  +    WNA+I    QN  +EE L  F  M   + + P+  T  SV+ AC   +A 
Sbjct: 442 DMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIH-SRMEPDDFTYGSVLKACAGRQAL 500

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IH   IK G+G D +V  AL+DMY + G IE +  I D  E +  VSWN +I+G+
Sbjct: 501 NTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGF 560

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           ++  Q  DA      M  M                    P++ T   VL  C  L+ +  
Sbjct: 561 SLLQQSEDAHKFFSRMLEM-----------------GVNPDNFTYAAVLDTCANLATVGL 603

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  I+  L +DV + S LVDMY+KCG +  ++ +F+  P R+ +TWN ++  Y  
Sbjct: 604 GKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAH 663

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E L+L ++M     +   VKPN  TF+++  AC+H G+V +G+  F  M  +YG+
Sbjct: 664 HGLGEEALKLFESM-----QLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGL 718

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HY+C+VD+LGR+G++++A  L+  MP E D A  W +LL  C+IH NVE+ E A 
Sbjct: 719 DPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEAD-AVIWRNLLSVCKIHGNVEVAEKAT 777

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + L  L+P  +S  VLLSNIY+ A +W    ++RK M+   ++KEPGCSWIE  DE+H F
Sbjct: 778 RALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAF 837

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           L GD  H + E+++  L  L   M+  GY+PD   +L    EE  +
Sbjct: 838 LVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVLLDEEVEEPAQ 883



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 284/580 (48%), Gaps = 36/580 (6%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           L  V   N++++ Y  CG +M    K F  + E+D VSWNS+I+   + G+   +++ F 
Sbjct: 112 LRDVVSYNSIISGYASCG-EMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M    V     +L  V  AC  L   D   +G QVHG  ++ G + +    +AL+ MYA
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECD---MGVQVHGLVVKFGFDCDVVTGSALLGMYA 227

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K  R+DD+ ++F    +++ VSW+ +++   QND+ +E +   ++M   G+       AS
Sbjct: 228 KCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYAS 287

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +  +C+ L  L  GKE+H++AL++    D   VG+A +DMY  C  +   ++V   +   
Sbjct: 288 LFRSCAALSALRLGKELHSHALKSAFGSD-IIVGTATLDMYAKCGRMADAQKVLSSMPKC 346

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  +NA+I GY +++   +AL  F ++    GL  +  T+S  + AC       +   +
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSF-QLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG A+K     +  V NA++DMY +   +  +  +FD ME RD VSWN +I     C Q+
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAA---CEQN 462

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
           G+    L    +M                 R +P+  T  +VL  C    AL  G EIH 
Sbjct: 463 GNEEETLAHFASMIHS--------------RMEPDDFTYGSVLKACAGRQALNTGMEIHT 508

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
             I++ +  D  VG+ALVDMY KCG +  A ++ D    + +++WN II  + +  + ++
Sbjct: 509 RIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSED 568

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
             +    M+  G     V P+  T+ A+   C++   V  G  +  ++      E   D 
Sbjct: 569 AHKFFSRMLEMG-----VNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDV 620

Query: 649 YAC--VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           Y C  +VD+  + G ++D+ QL+    P  D    W+++L
Sbjct: 621 YICSTLVDMYSKCGNMQDS-QLMFEKAPNRDFV-TWNAML 658



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 239/509 (46%), Gaps = 67/509 (13%)

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY------------------------- 227
           S+++ L  G+Q H   +  G E  TF+ N LM MY                         
Sbjct: 60  SKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYN 119

Query: 228 ------AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                 A  G +D A+  F    +RD+VSWN+++S   QN +  +++    +M   G+  
Sbjct: 120 SIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGF 179

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  S+A VL AC  LE  D G ++H   ++     D    GSAL+ MY  C+ ++    V
Sbjct: 180 DRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCD-VVTGSALLGMYAKCKRLDDSLSV 238

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  + +K    W+AMI G  QN+ + E L LF +M+ V G+  + +  +S+  +C    A
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGV-GVGVSQSIYASLFRSCAALSA 297

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H HA+K   G D  V  A +DMY++ GR+  ++ +   M      S+N +I G
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVG 357

Query: 462 YTICGQHGDAL----MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           Y    +   AL    +LL+     +E                     ITL   L  C ++
Sbjct: 358 YARSDRGFQALKSFQLLLKTGLGFDE---------------------ITLSGALNACASI 396

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
               +G+++H  A++++  +++ V +A++DMY KC  L  A  +FD+M  R+ ++WN II
Sbjct: 397 RGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAII 456

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-M 636
            A   +G  +E L    +M+        ++P++ T+ ++  AC+    ++ GM++  + +
Sbjct: 457 AACEQNGNEEETLAHFASMIHS-----RMEPDDFTYGSVLKACAGRQALNTGMEIHTRII 511

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           K   G +      A +VD+  + G +E A
Sbjct: 512 KSGMGFDSFVG--AALVDMYCKCGMIEKA 538



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 26/303 (8%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T S +   C +  +    +  H   I  G     +V N LM MY +   ++ +  +FD M
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRNNVY 491
            +RD VS+N++I+GY  CG+   A     EM                QN E  K+ +   
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
           ++    +    +  +L  VL  CGAL     G ++H   ++     DVV GSAL+ MYAK
Sbjct: 171 EMGRCGV--GFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAK 228

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           C  L+ +  VF  +P +N ++W+ +I     +    E LEL K M     +G  V  ++ 
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEM-----QGVGVGVSQS 283

Query: 612 TFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            + +LF +C+    +  G +L  + +K  +G +         +D+  + G++ DA ++++
Sbjct: 284 IYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVG--TATLDMYAKCGRMADAQKVLS 341

Query: 671 MMP 673
            MP
Sbjct: 342 SMP 344



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%)

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           NN   L +   +P     T   +   C   ++L  GK+ HA  I         V + L+ 
Sbjct: 33  NNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQ 92

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           MY KC  L++A +VFD M +R+V+++N II  Y   GE
Sbjct: 93  MYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGE 130


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 272/817 (33%), Positives = 440/817 (53%), Gaps = 67/817 (8%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K GS + D  ++F R+  +D  SWN++++   + G++  A+E+F  M
Sbjct: 94  NVITHNIMMNGYAKLGS-LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSM 152

Query: 172 LYS-NVEPSSFTLVSVALACSNLSRRD------GLRLGRQVHGNS----------LRVGE 214
             S +  P++FT      +C  L   +      GL       G+           +R G 
Sbjct: 153 RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGA 212

Query: 215 WN-------------TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            +              F  N+++A YAK   VD A  LF+S  +RD+VSWN +VS+LSQ+
Sbjct: 213 VDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQS 272

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EA+     M  RG++ D  +  S L AC+ L  L  GK++HA  +R+   ID  +V
Sbjct: 273 GRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCID-PYV 331

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            SA+V++Y  C   +  RRVF  + D+    W  +I G+ Q     E+L LF +M     
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL- 390

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           +  +   +++++  C           +H  ++K G  R   + N+L+ MY++ G ++ ++
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAE 450

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDA----------------LMLLREMQNMEEEK 485
           +IF  ME RD VSW  M+T Y+  G  G A                 ML   +Q+  EE 
Sbjct: 451 SIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEED 510

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
               +Y    T     P+ +T +T+  GC  + A   G +I  + ++  L  D  V +A+
Sbjct: 511 GLK-MYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAV 569

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + MY+KCG ++ AR++FD +  +++++WN +I  Y  HG G++ +E+  +M+ +G+    
Sbjct: 570 ITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGA---- 625

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
            KP+ ++++A+ ++CSHSG+V EG   F  +K D+ + P  +H++C+VDLL RAG + +A
Sbjct: 626 -KPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             LI+ MP +   A  W +LL AC+ H N E+ E+AA++LF L+   +  Y+LL+ IY+ 
Sbjct: 685 KNLIDEMPMK-PTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYAD 743

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
           A     +  VRK M++ G++K PG SW+E  +++H F A D SH Q   +   L+ L E+
Sbjct: 744 AGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEK 803

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           + + GYV  T  +   ++          HSEKLA+AFGI+N P    I + KNLR+C DC
Sbjct: 804 IAQLGYVR-TESLRSEIH----------HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDC 852

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H   K IS +  RE ++RD  RFHHFK G+CSCGDYW
Sbjct: 853 HTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 250/539 (46%), Gaps = 89/539 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   ++M    ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ +V +Y KCG    +  +VF  + +++ VSW  +I    ++G +
Sbjct: 321 IR---SLPCIDPYVASAMVELYAKCGC-FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCF 376

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             +LE F  M    +    F L ++   CSN   R  + L RQ+H  SL+ G     ++ 
Sbjct: 377 SESLELFNQMRAELMTVDQFALATIISGCSN---RMDMCLARQLHSLSLKSGHTRAVVIS 433

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--- 277
           N+L++MYAK G + +A+++F S E+RD+VSW  ++++ SQ     +A  F   M+ R   
Sbjct: 434 NSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVI 493

Query: 278 -----------------GIK------------PDGVSIASVLPACSHLEMLDTGKEIHAY 308
                            G+K            PD V+  ++   C+ +     G +I  +
Sbjct: 494 TWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGH 553

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  +++D S V +A++ MY  C  +   R++FDF+S K +  WNAMITGY Q+   ++
Sbjct: 554 TVKVGLILDTS-VMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQ 612

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL- 427
           A+ +F  M +  G  P+  +  +V+ +C  S    +     G      L RD  V   L 
Sbjct: 613 AIEIFDDMLK-KGAKPDYISYVAVLSSCSHSGLVQE-----GKFYFDMLKRDHNVSPGLE 666

Query: 428 -----MDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNM 481
                +D+ +R G +  +K + D+M ++ T   W  +++    C  HG+         N 
Sbjct: 667 HFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSA---CKTHGN---------NE 714

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK-----GKEIHAYAIRNML 535
             E    +++DLD                 P  G    LAK     GK + +  +R ++
Sbjct: 715 LAELAAKHLFDLDS----------------PDSGGYMLLAKIYADAGKSVDSAQVRKLM 757



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 258/606 (42%), Gaps = 101/606 (16%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  L    GL  G         + E N    N +M  YAKLG + DA+ LF 
Sbjct: 68  TLLHAYLSCGALPDARGLLRGD--------ITEPNVITHNIMMNGYAKLGSLSDAEELFG 119

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q+ +FL+A+     M   G   P+  +    + +C  L   +
Sbjct: 120 RMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHE 179

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
              ++     +     D   V + +VDM+  C  V+   + F  I    +   N+M+ GY
Sbjct: 180 VALQLLGLLTKFGFQGDPD-VATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGY 238

Query: 361 GQNEYDEEALMLFIKMEE------------------------VA------GLWPNATTMS 390
            ++   + AL LF  M E                        VA      G+  ++TT +
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S + AC +  +    + +H   I+     D YV +A++++Y++ G  + ++ +F  +  R
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           +TVSW  +I G+   G   ++L L  +M        R  +  +D+           L T+
Sbjct: 359 NTVSWTVLIGGFLQYGCFSESLELFNQM--------RAELMTVDQ---------FALATI 401

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN-------------- 556
           + GC     +   +++H+ ++++     VV+ ++L+ MYAKCG L               
Sbjct: 402 ISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDI 461

Query: 557 -----------------FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
                             AR  FD M  RNVITWN ++ AY  HG  ++ L++   M+ E
Sbjct: 462 VSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTE 521

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
                +V P+ VT++ LF  C+  G    G D         G+         V+ +  + 
Sbjct: 522 ----KDVIPDWVTYVTLFRGCADMGANKLG-DQITGHTVKVGLILDTSVMNAVITMYSKC 576

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----QNVEIGEIAAQNLFLLEPDVASH 715
           G++ +A ++ + +  +     +W++++     H    Q +EI +   +     +PD  S+
Sbjct: 577 GRISEARKIFDFLSRK--DLVSWNAMITGYSQHGMGKQAIEIFDDMLKK--GAKPDYISY 632

Query: 716 YVLLSN 721
             +LS+
Sbjct: 633 VAVLSS 638



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 91/345 (26%)

Query: 409 HGHAIKLGLGRDRYVQNAL--------------------------------MDMYSRMGR 436
           HG  + +GL    ++QN L                                M+ Y+++G 
Sbjct: 51  HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  ++ +F  M  RD  SWNT+++GY   G+  DA+     M+   +             
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS------------ 158

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN+ T    +  CGAL       ++     +     D  V + +VDM+ +CG ++
Sbjct: 159 ----LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVD 214

Query: 557 FARR-------------------------------VFDLMPVRNVITWNVIIMAYGMHGE 585
           FA +                               +F+ MP R+V++WN+++ A    G 
Sbjct: 215 FASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGR 274

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E L +  +M   G     V+ +  T+ +   AC+    +  G  L  ++       P 
Sbjct: 275 AREALSVAVDMHNRG-----VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL---PC 326

Query: 646 PDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            D Y  + +V+L  + G  ++A ++ + +        +W+ L+G 
Sbjct: 327 IDPYVASAMVELYAKCGCFKEARRVFSSLRDR--NTVSWTVLIGG 369



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 46/273 (16%)

Query: 507 LMTVLPGCGAL--------------------SALAKGKEIHAYA-------IRNMLATD- 538
           L   L  CGA                     +   +   +HAY         R +L  D 
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 539 ----VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
               V+  + +++ YAK G L+ A  +F  MP R+V +WN ++  Y   G   + +E   
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
           +M     R G+  PN  TF     +C   G     + L   +   +G +  PD    +VD
Sbjct: 151 SM----RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLL-GLLTKFGFQGDPDVATGIVD 205

Query: 655 LLGRAGKVEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           +  R G V+ A +  + +  P  F +    +    +  +   +E+ E       + E DV
Sbjct: 206 MFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFES------MPERDV 259

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
            S  +++S +  S +   +A+ V   M   GVR
Sbjct: 260 VSWNMMVSALSQSGRA-REALSVAVDMHNRGVR 291


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/672 (38%), Positives = 376/672 (55%), Gaps = 63/672 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N+ +   LM  YA L  V  A+ +F    +R+++  N ++ S   N  + E V     M 
Sbjct: 73  NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              ++PD  +   VL ACS    +  G++IH  A +   L    FVG+ LV MY  C  +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFL 191

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R V D +S + +  WN+++ GY QN+  ++AL +  +ME V  +  +A TM+S++PA
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK-ISHDAGTMASLLPA 250

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
              +      E +             YV+    DM+ +MG+             +  VSW
Sbjct: 251 VSNTTT----ENV------------MYVK----DMFFKMGK-------------KSLVSW 277

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MI  Y       +A+ L   M+    E                 P+++++ +VLP CG
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFE-----------------PDAVSITSVLPACG 320

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
             SAL+ GK+IH Y  R  L  ++++ +AL+DMYAKCGCL  AR VF+ M  R+V++W  
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I AYG  G G + + L   +   G     + P+ + F+   AACSH+G++ EG   F  
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSG-----LVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M D Y I P  +H AC+VDLLGRAGKV++AY+ I  M  E ++   W +LLGACR+H + 
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER-VWGALLGACRVHSDT 494

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           +IG +AA  LF L P+ + +YVLLSNIY+ A  W++  ++R  MK  G++K PG S +E 
Sbjct: 495 DIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
              IH FL GD SH QS++++  L+ L ++M++ GYVPD+   LH+V EE+KET L  HS
Sbjct: 555 NRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHS 614

Query: 816 EKLAIAFGILNTP-----PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           EKLAI F ++NT         TIR+ KNLR+C DCH A K IS+I SREII+RD  RFH 
Sbjct: 615 EKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 674

Query: 871 FKNGTCSCGDYW 882
           F+ G CSCGDYW
Sbjct: 675 FRFGVCSCGDYW 686



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 171/348 (49%), Gaps = 39/348 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +  + E +  +  M   +++PD++ FP VLKA +    + +G++IH    K G 
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S++ V N LV+MYGKCG  + +   V D ++ +D VSWNS++    +  ++D ALE  
Sbjct: 172 S-STLFVGNGLVSMYGKCGF-LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M    +   + T+ S+  A SN +  +                            MY 
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNTTTEN---------------------------VMY- 261

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                   K +F     + LVSWN ++    +N   +EAV    +M   G +PD VSI S
Sbjct: 262 -------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPAC     L  GK+IH Y  R   LI N  + +AL+DMY  C  +E  R VF+ +  +
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  W AMI+ YG +    +A+ LF K+++ +GL P++    + + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAAC 420



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 8/245 (3%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA L   EM+R D+   N       +       L + +++ +  + +  G    T+A+ L
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG----TMASLL 248

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
             +      ++  V  +F ++ +K  VSWN MI    +      A+E +  M     EP 
Sbjct: 249 PAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
           + ++ SV  AC + S    L LG+++HG   R     N  + NAL+ MYAK G ++ A+ 
Sbjct: 309 AVSITSVLPACGDTS---ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F++ + RD+VSW  ++S+   + +  +AV    ++   G+ PD ++  + L ACSH  +
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425

Query: 299 LDTGK 303
           L+ G+
Sbjct: 426 LEEGR 430


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/683 (35%), Positives = 381/683 (55%), Gaps = 71/683 (10%)

Query: 204 QVHGNSLRVGEW-NTFIMNALMAMYAK--LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           Q+HG  LR G + + ++  AL+  YA       D A  +F S  + ++  WN ++    +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N+K  +A+ F  +M +   +P+  +  ++  ACS  + +  G++IH + +++ I  D   
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD-VH 168

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EV 379
           + SA + MY +   +E  R++F +  +  +  WN MI GY +    E A  LF +M  + 
Sbjct: 169 IKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKN 227

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G W                                         N +++  ++ G +  
Sbjct: 228 IGSW-----------------------------------------NVMINGLAKGGNLGD 246

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +FD+M  RD +SW++M+ GY   G++ +AL + ++MQ  E                 
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE----------------- 289

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P    L +VL  C  + A+ +G+ +HAY  RN +  D V+G+AL+DMYAKCG L+   
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGW 349

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VF+ M  R + TWN +I    +HG  ++ LEL   +     + G +KPN +T + +  A
Sbjct: 350 EVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL-----QEGRMKPNGITLVGVLTA 404

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+H+G V +G+ +F  M++ YG++P  +HY C+VDLLGR+G   +A  LIN MP +   A
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK-PNA 463

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LLGACRIH N ++ E   + L  LEP  +  YVLLSNIY+    +D    +RK M
Sbjct: 464 AVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLM 523

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           K+ G++  PG S ++    +H+F  GDGSH Q ++++  L+ + ER++  G+ PDTS VL
Sbjct: 524 KDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVL 583

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
            +++EEEKET +  HSEKLAIAFG++NT PG  I + KNLRVC+DCH ATK IS+I  RE
Sbjct: 584 FDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDRE 643

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           II+RD  R+HHFKNGTCSC D+W
Sbjct: 644 IIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 204/429 (47%), Gaps = 54/429 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++    +N+  +AI  Y  M   D +P+ F +P + KA +  Q +  G+QIH HVV
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+G G S V + +  ++MY   G  + D  K+F    E D V WN+MI    + G  + A
Sbjct: 160 KHGIG-SDVHIKSAGIHMYASFGR-LEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAA 216

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
              F  M   N+                                    G WN  I N L 
Sbjct: 217 KGLFAQMPVKNI------------------------------------GSWNVMI-NGL- 238

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
              AK G + DA+ LF    +RD +SW+++V       ++ EA+   +QM     +P   
Sbjct: 239 ---AKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
            ++SVL ACS++  +D G+ +HAY  RN I +D + +G+AL+DMY  C  ++ G  VF+ 
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD-AVLGTALLDMYAKCGRLDMGWEVFEE 354

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + +++I  WNAMI G   +   E+AL LF K++E   + PN  T+  V+ AC  +  F D
Sbjct: 355 MKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE-GRMKPNGITLVGVLTACAHA-GFVD 412

Query: 405 KEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           K       ++   G D  +++   ++D+  R G    ++ + + M ++   + W  ++  
Sbjct: 413 KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472

Query: 462 YTICGQHGD 470
              C  HG+
Sbjct: 473 ---CRIHGN 478



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 5/160 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +++EA+  + +M R + +P  F   +VL A + I  +  G+ +HA++
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYL 320

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +    L +V +   L++MY KCG  DM   ++VF+ + E++  +WN+MI  L   G+ +
Sbjct: 321 KRNSIKLDAV-LGTALLDMYAKCGRLDMG--WEVFEEMKEREIFTWNAMIGGLAIHGRAE 377

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRL 201
            ALE F  +    ++P+  TLV V  AC++    D GLR+
Sbjct: 378 DALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRI 417


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/713 (36%), Positives = 395/713 (55%), Gaps = 29/713 (4%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRD 247
           S + R   LR  +Q H + +R G + + +  + L A+ A      ++ A+ +F      +
Sbjct: 36  SLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPN 95

Query: 248 LVSWNTIVSSLSQN-DKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEI 305
             +WNT++ + +   D       FL  ++      P+  +   ++ A + +  L  G+ +
Sbjct: 96  SFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H  A+++ +  D  FV ++L+  Y +C +++   +VF  I +K +  WN+MI G+ Q   
Sbjct: 156 HGMAIKSAVGSD-VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
            ++AL LF KME    +  +  TM  V+ AC +         +  +  +  +  +  + N
Sbjct: 215 PDKALELFKKMES-EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME--- 482
           A++DMY++ G IE +K +FD ME +D V+W TM+ GY I   +  A  +L  M   +   
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333

Query: 483 --------EEKNRNN----VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
                   E+  + N    V+   +     K N ITL++ L  C  + AL  G+ IH+Y 
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
            +N +  +  V SAL+ MY+KCG L  AR VF+ +  R+V  W+ +I    MHG G E +
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           ++   M     +   VKPN VTF  +F ACSH+G+V E   LFYKM+  YGI P   HYA
Sbjct: 454 DMFYKM-----QEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYA 508

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VD+LGR+G +E A + I  MP        W +LLGAC+IH N+ + E+A   L  LEP
Sbjct: 509 CIVDVLGRSGYLEKAVKFIEAMPIP-PSTSVWGALLGACKIHANLSLAEMACTRLLELEP 567

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
                +VLLSNIY+ +  WD   ++RK M+  G++KEPGCS IE    IH+FL+GD +H 
Sbjct: 568 RNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 627

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPP 829
            SE+++G L  + E+++  GY P+ S VL  + EEE KE  L  HSEKLAI +G+++T  
Sbjct: 628 MSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 687

Query: 830 GTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              IRV KNLR+C DCH   K IS++ +REII+RD  RFHHF+NG CSC D+W
Sbjct: 688 PKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 160/556 (28%), Positives = 264/556 (47%), Gaps = 62/556 (11%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           L     LSS  + +        +P P S T     W   +R+ A       +I ++++M 
Sbjct: 69  LFAIAALSSFASLEYARKVFDEIPQPNSFT-----WNTLIRAYASGPDPVCSIWAFLDMV 123

Query: 70  RSDIQ--PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
            S+ Q  P+ + FP ++KA A +  LSLG+ +H   +K   G S V VAN+L++ Y  CG
Sbjct: 124 SSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVG-SDVFVANSLIHCYFSCG 182

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+    KVF  I EKD VSWNSMI    + G  D ALE F+ M   +V+ S  T+V V 
Sbjct: 183 -DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 241

Query: 188 LACSNLSRRD---GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
            AC+ +  RD   G R+   +  N + V   N  + NA++ MY K G ++DAK LF + E
Sbjct: 242 SACAKI--RDLEFGRRVCSYIEENRVNV---NLTLANAMLDMYTKCGSIEDAKRLFDAME 296

Query: 245 D-------------------------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           +                               +D+V+WN ++S+  QN K  EA++   +
Sbjct: 297 EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHE 356

Query: 274 MAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           + L + IK + +++ S L AC+ +  L+ G+ IH+Y  +N I + N +V SAL+ MY  C
Sbjct: 357 LQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKM-NFYVTSALIHMYSKC 415

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            ++E  R VF+ +  + + +W+AMI G   +    EA+ +F KM+E A + PN  T ++V
Sbjct: 416 GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQE-ANVKPNGVTFTNV 474

Query: 393 VPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
             AC  +    + E + +      G+  +      ++D+  R G +E +    + M +  
Sbjct: 475 FCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 534

Query: 452 TVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKN-----RNNVY----DLDETVLRPK 501
           + S W  ++    I      A M    +  +E   +      +N+Y      D      K
Sbjct: 535 STSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRK 594

Query: 502 PNSITLMTVLPGCGAL 517
              +T +   PGC ++
Sbjct: 595 HMRVTGLKKEPGCSSI 610


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/629 (38%), Positives = 370/629 (58%), Gaps = 28/629 (4%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S L  N +  EA++   +M + G +       ++L AC     L  G+ +HA+ ++   
Sbjct: 26  ISQLCSNGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L   +++ + L+  Y  C  +E  R+V D + +K +  W AMI+ Y Q  +  EAL +F 
Sbjct: 83  L-PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFA 141

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M    G  PN  T ++V+ +C+R+      + IHG  +K       +V ++L+DMY++ 
Sbjct: 142 EMMRSDG-KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 200

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G+IE ++ IF+ +  RD VS   +I GY   G   +AL + + +Q+   E  R       
Sbjct: 201 GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQS---EGMR------- 250

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  PN +T  ++L     L+ L  GK+ H + +R  L    V+ ++L+DMY+KCG 
Sbjct: 251 -------PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 303

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L++A+R+FD MP R  I+WN +++ Y  HG G+EVLEL + M  E      VKP+ VT +
Sbjct: 304 LSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK----RVKPDAVTLL 359

Query: 615 ALFAACSHSGMVSEGMDLFYKM-KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           A+ + CSH  M   G+ ++  M   +YGI+P  +HY C+VD+LGRAG++++A++ I  MP
Sbjct: 360 AVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMP 419

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            +   AG   SLLGACR+H +V+IGE     L  +EP+ A +YV+LSN+Y+SA  W+   
Sbjct: 420 SK-PTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVN 478

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           +VR  M +  V KEPG SWI+    +H F A D +H + E++   ++ +S +M++ GYVP
Sbjct: 479 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVP 538

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           D SCVL++V+EE+KE +L GHSEKLA+ FG++ T  G  IRV KNLR+C DCH   K  S
Sbjct: 539 DISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFS 598

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K+  RE+ LRD  RFH    G CSCGDYW
Sbjct: 599 KVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 213/404 (52%), Gaps = 18/404 (4%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           + + +EA+L   EM     +     + A+L A    + L  G+++HAH++K  Y L +  
Sbjct: 32  NGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY-LPATY 87

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +   L+  YGKC   + D  KV D + EK+ VSW +MI+   + G    AL  F  M+ S
Sbjct: 88  LRTRLLIFYGKCDC-LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRS 146

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN----TFIMNALMAMYAKL 230
           + +P+ FT  +V  +C    R  GL LG+Q+HG    + +WN     F+ ++L+ MYAK 
Sbjct: 147 DGKPNEFTFATVLTSCI---RASGLALGKQIHG---LIVKWNYDSHIFVGSSLLDMYAKA 200

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G++++A+ +F+   +RD+VS   I++  +Q     EA+   +++   G++P+ V+ AS+L
Sbjct: 201 GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLL 260

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            A S L +LD GK+ H + LR ++    + + ++L+DMY  C  +   +R+FD + ++  
Sbjct: 261 TALSGLALLDHGKQAHCHVLRRELPF-YAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTA 319

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAM+ GY ++    E L LF  M +   + P+A T+ +V+  C   +       I+ 
Sbjct: 320 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYD 379

Query: 411 HAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
             +  + G+  D      ++DM  R GRI+ +      M  + T
Sbjct: 380 GMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 423



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 144/265 (54%), Gaps = 7/265 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++    EA+  + EM RSD +P+ F F  VL +      L+LGKQIH  +
Sbjct: 119 SWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLI 178

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+ Y  S + V ++L++MY K G  + +  ++F+ + E+D VS  ++IA   + G  + 
Sbjct: 179 VKWNYD-SHIFVGSSLLDMYAKAG-QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 236

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F+ +    + P+  T  S+  A S L+  D    G+Q H + LR    +   + N+
Sbjct: 237 ALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDH---GKQAHCHVLRRELPFYAVLQNS 293

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKP 281
           L+ MY+K G +  A+ LF +  +R  +SWN ++   S++    E +   R M   + +KP
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353

Query: 282 DGVSIASVLPACSHLEMLDTGKEIH 306
           D V++ +VL  CSH +M DTG  I+
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIY 378


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/586 (40%), Positives = 346/586 (59%), Gaps = 39/586 (6%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCR-----EVECGRRVFDFISDKKIALWNAMI 357
           K+ HA  LR   L D S++  +LV  Y N         E   RVFDF+    + LWN MI
Sbjct: 72  KQAHALILRTGHLQD-SYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMI 130

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
               +N    +A++L+ +M  VA   PN  T  +V+ AC  +    +   +H H +K GL
Sbjct: 131 KVCIENNEPFKAILLYYEMM-VAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGL 189

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
           G D ++ ++ + MY+  GR+  ++ I DD            +    +  + G  +  L  
Sbjct: 190 GGDGHILSSAIRMYASFGRLVEARRILDDK--------GGEVDAVCMPDRKGCFMEALEI 241

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
              M++EK R              P    L +VL  C  L AL +G+ IH YA RN +  
Sbjct: 242 FHQMQKEKIR--------------PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL 287

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           D V+G++LVDMYAKCG ++ A  VF+ M  + V +WN +I    MHG  ++ ++L   M 
Sbjct: 288 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM- 346

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
                  ++ PNE+TF+ +  AC+H G+V +G+ +F  M+ +YG+EP  +HY C+VDLLG
Sbjct: 347 -------DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 399

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG + +A ++++ +P E   A  W +LLGACR H NVE+GE   + L  LEP  +  Y 
Sbjct: 400 RAGLLTEAEKVVSSIPTEPTPA-VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYT 458

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG-DEIHKFLAGDGSHQQSEQLH 776
           LLSNIY+ A  W++  +VRK MKE G++  PG S I+ G  E+HKF+ GDGSH Q + ++
Sbjct: 459 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 518

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
             L+ + ER++ EGY PD S VL +++EEEKET +  HSEKLAI FG++NT PGTTIR+ 
Sbjct: 519 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 578

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH ATK IS++ +REII+RD  R+HHF+NG CSC D+W
Sbjct: 579 KNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 202/424 (47%), Gaps = 60/424 (14%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY----KVFDRITEKDQVSWNSMI 152
           KQ HA +++ G+ L    +A +LV  Y    ++ +  +    +VFD + + +   WN MI
Sbjct: 72  KQAHALILRTGH-LQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMI 130

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                  +   A+  +  M+ ++  P+ +T  +V  ACS+      +  G QVH + ++ 
Sbjct: 131 KVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV---VAEGVQVHAHLVKH 187

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK---FLEAV 268
           G   +  I+++ + MYA  GR+ +A+ +    +D+        V ++   D+   F+EA+
Sbjct: 188 GLGGDGHILSSAIRMYASFGRLVEARRIL---DDK-----GGEVDAVCMPDRKGCFMEAL 239

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
               QM    I+P    + SVL AC++L  LD G+ IH YA RN I +D   +G++LVDM
Sbjct: 240 EIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD-GVLGTSLVDM 298

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  ++    VF+ +S+K+++ WNAMI G   +   E+A+ LF KM+    + PN  T
Sbjct: 299 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD----INPNEIT 354

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGL----------GRDRYVQN--ALMDMYSRMGR 436
              V+ AC            HG  ++ GL          G +  +++   ++D+  R G 
Sbjct: 355 FVGVLNACA-----------HGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGL 403

Query: 437 IEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDA--------LMLLREMQNMEEEKNR 487
           +  ++ +   +    T + W  ++     C +HG+         ++L  E QN       
Sbjct: 404 LTEAEKVVSSIPTEPTPAVWGALLGA---CRKHGNVELGERVGKILLELEPQNSGRYTLL 460

Query: 488 NNVY 491
           +N+Y
Sbjct: 461 SNIY 464



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 14/252 (5%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           +N+  +AIL Y EM  +  +P+ + +PAVLKA +    ++ G Q+HAH+VK+G G     
Sbjct: 136 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLG-GDGH 194

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + ++ + MY   G  +     + D+  E D V          R G +  ALE F  M   
Sbjct: 195 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPD------RKGCFMEALEIFHQMQKE 248

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
            + P  F L SV  AC+NL   D    GR +H  + R   + +  +  +L+ MYAK GR+
Sbjct: 249 KIRPRKFVLPSVLSACANLGALDQ---GRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRI 305

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           D A  +F+   ++++ SWN ++  L+ + +  +A+    +M    I P+ ++   VL AC
Sbjct: 306 DLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNAC 362

Query: 294 SHLEMLDTGKEI 305
           +H  ++  G  I
Sbjct: 363 AHGGLVQKGLTI 374



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           R   F EA+  + +M +  I+P  F  P+VL A A +  L  G+ IH +  +    L  V
Sbjct: 231 RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 290

Query: 114 TVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
            +  +LV+MY KCG  D+   ++VF++++ K+  SWN+MI  L   G+ + A++ F  M 
Sbjct: 291 -LGTSLVDMYAKCGRIDL--AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM- 346

Query: 173 YSNVEPSSFTLVSVALACSN 192
             ++ P+  T V V  AC++
Sbjct: 347 --DINPNEITFVGVLNACAH 364


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/721 (35%), Positives = 407/721 (56%), Gaps = 31/721 (4%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++L+       LS G+Q HA ++  G G + + +   L+ MY  CG+ + D   +F ++ 
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGI-LGTKLLGMYVLCGAFL-DAKNIFYQLR 108

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
                 WN MI      G++D AL  +  ML     P  +T   V  AC  L   + + L
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL---NSVAL 165

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR VH     +G E + F+ ++L+  Y++ G + DA+ LF     +D V WN +++   +
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N  +  A     +M      P+ V+ A VL  C+   M++ G ++H   + + + +D+  
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 321 VGS-ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
             + AL+D+Y  CR+VE  R++FD  +   I +  AMI+GY  N  +  AL +F  + + 
Sbjct: 286 ANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ- 344

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             +  N+ T++SV+PAC    A    + +HGH +K G G   YV +A+MDMY++ GR+++
Sbjct: 345 ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDL 404

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +   F  +  +D V WN+MIT  +  G+  +A+ L R+M                  +  
Sbjct: 405 AHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQM-----------------GMAG 447

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            K + +++   L  C  L AL  GKEIHA+ +R    +D+   SAL+DMY+KCG L+ A 
Sbjct: 448 TKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLAC 507

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           RVFD M  +N ++WN II AYG HG  ++ L L   M+ +G     ++P+ VTF+A+ +A
Sbjct: 508 RVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-----IQPDHVTFLAIISA 562

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C H+G V EG+  F  M ++ GI    +HYAC+VDL GRAG++ +A+ +IN MP   D A
Sbjct: 563 CGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPD-A 621

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
           G W +LLGACR+H NVE+ E+A++NLF L+P  + +YVLLSN++++A  W+  + +R  M
Sbjct: 622 GVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLM 681

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           KE GV+K PGCSWI+  +  H F+A D SH QS Q++  L+NL   +RKEGYVP     +
Sbjct: 682 KERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPM 741

Query: 800 H 800
           H
Sbjct: 742 H 742



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/554 (29%), Positives = 273/554 (49%), Gaps = 37/554 (6%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C E W   +R      QF  A+L Y +M      PD + FP V+KA  G+  ++LG+ +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
             +   G+ L  V V ++L+  Y + G  + D   +FDR+  KD V WN M+    + G 
Sbjct: 171 DKIQFMGFEL-DVFVGSSLIKFYSENGC-IHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           WD A   F  M  +   P+S T   V   C++      +  G Q+HG  +  G E ++ +
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCAS---EIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 220 MN--ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            N  AL+ +Y K   V+ A+ +F      D+V    ++S    N     A+   R +   
Sbjct: 286 ANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE 345

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            ++ + V++ASVLPAC+ L  L  GKE+H + L+N     + +VGSA++DMY  C  ++ 
Sbjct: 346 RMRANSVTLASVLPACAGLAALTLGKELHGHILKNG-HGGSCYVGSAIMDMYAKCGRLDL 404

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             + F  ISDK    WN+MIT   QN   EEA+ LF +M  +AG   +  ++S+ + AC 
Sbjct: 405 AHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQM-GMAGTKYDCVSISAALSACA 463

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              A    + IH   ++     D + ++AL+DMYS+ G ++++  +FD ME ++ VSWN+
Sbjct: 464 NLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNS 523

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I  Y   G+  D+L L   M              L + +   +P+ +T + ++  CG  
Sbjct: 524 IIAAYGNHGRLKDSLNLFHGM--------------LGDGI---QPDHVTFLAIISACGHA 566

Query: 518 SALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR-NVI 571
             + +G  IH +  R M     ++      + +VD++ + G LN A  + + MP   +  
Sbjct: 567 GQVDEG--IHYF--RCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAG 622

Query: 572 TWNVIIMAYGMHGE 585
            W  ++ A  +HG 
Sbjct: 623 VWGTLLGACRLHGN 636



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 184/407 (45%), Gaps = 31/407 (7%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S+L  C+    L  G++ HA  L N I   N  +G+ L+ MY  C      + +F  +
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGY-NGILGTKLLGMYVLCGAFLDAKNIFYQL 107

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                  WN MI G+      + AL+ + KM    G  P+  T   V+ AC    +    
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG-CGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H     +G   D +V ++L+  YS  G I  ++ +FD M  +D V WN M+ GY   
Sbjct: 167 RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKN 226

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A  +  EM+  E                   PNS+T   VL  C +   +  G +
Sbjct: 227 GDWDNATGVFMEMRRTET-----------------NPNSVTFACVLSVCASEIMINFGSQ 269

Query: 526 IHAYAIRNMLATDVVVGS--ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           +H   + + L  D  V +  AL+D+Y KC  +  AR++FD     +++    +I  Y ++
Sbjct: 270 LHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 329

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGI 642
           G     LE+ + ++ E      ++ N VT  ++  AC+    ++ G +L  + +K+ +G 
Sbjct: 330 GMNNNALEIFRWLLQE-----RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHG- 383

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             S    + ++D+  + G+++ A+Q    +  +   A  W+S++ +C
Sbjct: 384 -GSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK--DAVCWNSMITSC 427



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 27/292 (9%)

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           A  + S++  C            H   +  G+G +  +   L+ MY   G    +K IF 
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            + +  +  WN MI G+T+ GQ   AL+   +M                       P+  
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGT-----------------LPDKY 148

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   V+  CG L+++A G+ +H          DV VGS+L+  Y++ GC++ AR +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P ++ + WNV++  Y  +G+      +   M     R  E  PN VTF  + + C+   M
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEM-----RRTETNPNSVTFACVLSVCASEIM 263

Query: 626 VSEGMDLFYKMKDDYGIE---PSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           ++ G  L + +    G+E   P  + +A ++D+  +   VE A ++ +   P
Sbjct: 264 INFGSQL-HGLVVSSGLEMDSPVANTFA-LIDIYFKCRDVEMARKIFDQRTP 313


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/711 (36%), Positives = 390/711 (54%), Gaps = 81/711 (11%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML S   P      SV  +C+ +     LR G  VHG  +R+G  ++ +  NALM MY+K
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMK---DLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK 57

Query: 230 -----------------LGRVDDAKTLFKSFEDRDL-VSWNTIVSSLSQNDKFLEAVMFL 271
                            LG + + + + K     DL    +  V+ + QN    +    L
Sbjct: 58  FWSLEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNIL 117

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            Q+                   ++ ++ D GK    Y+ +     ++ ++GS        
Sbjct: 118 YQVN------------------TYKKVFDEGKTSDVYSKKEK---ESYYLGSL------- 149

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
                  R+VF+ +  + I  WN +I+G  QN   E+ALM+  +M   A L P++ T+SS
Sbjct: 150 -------RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGN-ADLRPDSFTLSS 201

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+P           + IHG+AI+ G   D ++ ++L+DMY++  R++ S  +F  +   D
Sbjct: 202 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHD 261

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            +SWN++I G    G   + L   ++M                  + + KPN ++  +++
Sbjct: 262 GISWNSIIAGCVQNGMFDEGLKFFQQM-----------------LIAKIKPNHVSFSSIM 304

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           P C  L+ L  GK++H Y IR+    +V + SALVDMYAKCG +  AR +FD M + +++
Sbjct: 305 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 364

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +IM Y +HG   + + L K M  EG     VKPN V F+A+  ACSH+G+V E   
Sbjct: 365 SWTAMIMGYALHGHAYDAISLFKRMEVEG-----VKPNYVAFMAVLTACSHAGLVDEAWK 419

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M  DY I P  +HYA V DLLGR G++E+AY+ I+ M  E      WS+LL ACR+
Sbjct: 420 YFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE-PTGSVWSTLLAACRV 478

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N+E+ E  ++ LF ++P     YVLLSNIYS+A  W  A  +R  M++ G++K+P CS
Sbjct: 479 HKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACS 538

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           WIE  +++H F+AGD SH   ++++  L+ L E+M +EGYV DT+ VLH+V EE+K  LL
Sbjct: 539 WIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLL 598

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           C HSE+LAI FGI++TP GTTIRV KNLRVC DCH ATKFISKI  REI+ 
Sbjct: 599 CSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVF 649



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 186/333 (55%), Gaps = 14/333 (4%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVF+ + ++D VSWN++I+   + G  + AL   R M  +++ P SFTL SV       +
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV---LPIFA 207

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  G+++HG ++R G + + FI ++L+ MYAK  RVDD+  +F      D +SWN+
Sbjct: 208 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 267

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           I++   QN  F E + F +QM +  IKP+ VS +S++PAC+HL  L  GK++H Y +R+ 
Sbjct: 268 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 327

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
               N F+ SALVDMY  C  +   R +FD +    +  W AMI GY  + +  +A+ LF
Sbjct: 328 -FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 386

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI----KLGLGRDRYVQNALMD 429
            +M EV G+ PN     +V+ AC  +    D+   + +++    ++  G + Y   A+ D
Sbjct: 387 KRM-EVEGVKPNYVAFMAVLTACSHA-GLVDEAWKYFNSMTQDYRIIPGLEHYA--AVAD 442

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           +  R+GR+E +     DM +  T S W+T++  
Sbjct: 443 LLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 201/478 (42%), Gaps = 101/478 (21%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY---- 123
           M  S   PD+  FP+VLK+   ++DL  G+ +H  +++ G G    T  N L+NMY    
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT-CNALMNMYSKFW 59

Query: 124 -------------------------GKCGSDMWDVYKVFDRITEKDQVS-WNSMIATLCR 157
                                    GKC +      ++ +R+   DQ    N M   L +
Sbjct: 60  SLEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQ 119

Query: 158 FGKWDLALEAFRMM-LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
              +    +  +   +YS  E  S+ L S+      + +RD              +  WN
Sbjct: 120 VNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRD--------------IVSWN 165

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           T I        A+ G  +DA  + +   + DL                            
Sbjct: 166 TVISGN-----AQNGMHEDALMMVREMGNADL---------------------------- 192

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
              +PD  +++SVLP  +    L  GKEIH YA+RN    D  F+GS+L+DMY  C  V+
Sbjct: 193 ---RPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD-VFIGSSLIDMYAKCTRVD 248

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              RVF  +       WN++I G  QN   +E L  F +M  +A + PN  + SS++PAC
Sbjct: 249 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM-LIAKIKPNHVSFSSIMPAC 307

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + +HG+ I+     + ++ +AL+DMY++ G I  ++ IFD ME+ D VSW 
Sbjct: 308 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 367

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            MI GY + G   DA+ L + M+                 V   KPN +  M VL  C
Sbjct: 368 AMIMGYALHGHAYDAISLFKRME-----------------VEGVKPNYVAFMAVLTAC 408



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 176/321 (54%), Gaps = 13/321 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++    +A++   EM  +D++PD+F   +VL   A   +L  GK+IH + 
Sbjct: 163 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 222

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ GY  + V + ++L++MY KC + + D  +VF  + + D +SWNS+IA   + G +D 
Sbjct: 223 IRNGYD-ADVFIGSSLIDMYAKC-TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 280

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L+ F+ ML + ++P+  +  S+  AC++L+    L LG+Q+HG  +R   + N FI +A
Sbjct: 281 GLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT---LHLGKQLHGYIIRSRFDGNVFIASA 337

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +  A+ +F   E  D+VSW  ++   + +    +A+   ++M + G+KP+
Sbjct: 338 LVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPN 397

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V+  +VL ACSH  ++D   +      ++  +I      +A+ D+      +E     +
Sbjct: 398 YVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE---EAY 454

Query: 343 DFISDKKI----ALWNAMITG 359
           +FISD  I    ++W+ ++  
Sbjct: 455 EFISDMHIEPTGSVWSTLLAA 475


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/768 (33%), Positives = 421/768 (54%), Gaps = 31/768 (4%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT++  Y K G ++ +   +FD + ++  V+W  +I    +  ++  A   F  M    +
Sbjct: 136 NTMIMGYIKSG-NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGI 194

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDD 235
           +P     VS+A   S  +  D +   RQVH + +++G  +T ++ N+L+  Y K   +  
Sbjct: 195 DPDH---VSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGL 251

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  LF    +RD V++N +++  S+     EA+    +M   G +P   + A++L A   
Sbjct: 252 AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQ 311

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L+ ++ G+++H + ++ +  + N FV +AL+D Y     V    ++F  + +     +N 
Sbjct: 312 LDDIEFGQQVHGFVVKCN-FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           ++T Y  N   +E+L LF +++   G        ++++     S        IH   I  
Sbjct: 371 LVTCYAWNGRVKESLELFKELQ-FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
               +  V N+L+DMY++ G    +  IF D+ ++ +V W  MI+ Y   G H D L L 
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            EMQ                   +   ++ T  +++  C +L++L  GK++H++ I +  
Sbjct: 490 VEMQRA-----------------KIGADAATYASIVRACASLASLTLGKQLHSHIIGSGY 532

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
            ++V  GSALVDMYAKCG +  A ++F  MPVRN ++WN +I AY  +G+G   L L + 
Sbjct: 533 ISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEE 592

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           MV  G     ++P+ V+ +++  ACSH G+V EG+  F  M   Y + P  +HYA  +D+
Sbjct: 593 MVRSG-----LQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDM 647

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP-DVAS 714
           L R G+ ++A +L+  MP E D+   WSS+L +C IH+N E+ + AA  LF ++    A+
Sbjct: 648 LCRGGRFDEAEKLMAQMPFEPDEI-MWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAA 706

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YV +SNIY++A  WD    V+K M+E GV+K P  SW+E   + H F A D +H Q  +
Sbjct: 707 PYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMRE 766

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           +   L+ L E+M K+GY PD+SC LHNV+EE K   L  HSE++AIAF +++TP G+ I 
Sbjct: 767 IMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPIL 826

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           V KNLR C DCH A K ISKI  REI +RD  RFHHF++G C+C DYW
Sbjct: 827 VMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 286/561 (50%), Gaps = 28/561 (4%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   +   A++NQFREA   +IEM R  I PD+ +   +L        ++  +Q+
Sbjct: 161 RTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQV 220

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H+HV+K GY  S++ V+N+L++ Y K  S +   +++F+ I E+D V++N+++    + G
Sbjct: 221 HSHVIKLGYD-STLVVSNSLLDSYCKTRS-LGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
               A+  F  M      P+ FT  ++  A   L   D +  G+QVHG  ++    WN F
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQL---DDIEFGQQVHGFVVKCNFVWNVF 335

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NAL+  Y+K  RV +A  LF    + D +S+N +V+  + N +  E++   +++   G
Sbjct: 336 VANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTG 395

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
                   A++L   +    LD G++IH+  +  D  I    VG++LVDMY  C E    
Sbjct: 396 FDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA-ISEILVGNSLVDMYAKCGEFGEA 454

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R+F  ++ +    W AMI+ Y Q    E+ L LF++M+  A +  +A T +S+V AC  
Sbjct: 455 NRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQR-AKIGADAATYASIVRACAS 513

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +    + +H H I  G   + +  +AL+DMY++ G I+ +  +F +M VR++VSWN +
Sbjct: 514 LASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNAL 573

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+ Y    Q+GD    LR    + EE  R+ +          +P+S++L+++L  C    
Sbjct: 574 ISAY---AQNGDGDCTLR----LFEEMVRSGL----------QPDSVSLLSILCACSHCG 616

Query: 519 ALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            + +G +      R   L       ++ +DM  + G  + A ++   MP   + I W+ +
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSV 676

Query: 577 IMAYGMHGEGQEVLELLKNMV 597
           + + G+H + QE+ +   N +
Sbjct: 677 LNSCGIH-KNQELAKKAANQL 696



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 251/475 (52%), Gaps = 31/475 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N ++  Y K G + +A+TLF S   R  V+W  ++   +QN++F EA     +M 
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS-ALVDMYCNCRE 334
             GI PD VS+A++L   +  + ++  +++H++ ++  +  D++ V S +L+D YC  R 
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIK--LGYDSTLVVSNSLLDSYCKTRS 248

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +    ++F+ I ++    +NA++TGY +  ++ EA+ LF KM+EV G  P   T ++++ 
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEV-GYRPTEFTFAAILT 307

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A ++ +     + +HG  +K     + +V NAL+D YS+  R+  +  +F +M   D +S
Sbjct: 308 AGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS 367

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           +N ++T Y   G+  ++L L +E+Q    ++ RN  +              TL+++    
Sbjct: 368 YNVLVTCYAWNGRVKESLELFKELQFTGFDR-RNFPF-------------ATLLSI---- 409

Query: 515 GALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
            A+S  L  G++IH+  I     ++++VG++LVDMYAKCG    A R+F  + +++ + W
Sbjct: 410 AAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPW 469

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
             +I +Y   G  ++ L+L   M     +  ++  +  T+ ++  AC+    ++ G  L 
Sbjct: 470 TAMISSYVQKGLHEDGLKLFVEM-----QRAKIGADAATYASIVRACASLASLTLGKQLH 524

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
             +    G   +    + +VD+  + G ++DA Q+   MP     + +W++L+ A
Sbjct: 525 SHIIGS-GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR--NSVSWNALISA 576



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 49/314 (15%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT------------------- 358
           N++  + LV  +    ++   R++FD +  K I   N MI                    
Sbjct: 100 NTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMF 159

Query: 359 ------------GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
                       GY QN    EA  LFI+M    G+ P+  ++++++      ++  +  
Sbjct: 160 QRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR-HGIDPDHVSLATLLSGFTEFDSVNEVR 218

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H H IKLG      V N+L+D Y +   + ++  +F+D+  RD+V++N ++TGY+  G
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
            + +A+ L  +MQ +                   +P   T   +L     L  +  G+++
Sbjct: 279 FNREAINLFFKMQEVGY-----------------RPTEFTFAAILTAGIQLDDIEFGQQV 321

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H + ++     +V V +AL+D Y+K   +  A ++F  MP  + I++NV++  Y  +G  
Sbjct: 322 HGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRV 381

Query: 587 QEVLELLKNMVAEG 600
           +E LEL K +   G
Sbjct: 382 KESLELFKELQFTG 395



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 159/378 (42%), Gaps = 71/378 (18%)

Query: 387 TTMSSVVPACVR---SEAFPDKEGIHGHA--IKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + M++++  C R   +     K  +H  A  IK G   + Y  N L+  + + G +  ++
Sbjct: 62  SLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGAR 121

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEK 485
            +FD+M  ++  S NTMI GY   G   +A  L   M                QN +  +
Sbjct: 122 KLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFRE 181

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                 ++    +   P+ ++L T+L G     ++ + +++H++ I+    + +VV ++L
Sbjct: 182 AFGLFIEMGRHGI--DPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSL 239

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           +D Y K   L  A ++F+ +P R+ +T+N ++  Y   G  +E + L   M   G R   
Sbjct: 240 LDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYR--- 296

Query: 606 VKPNEVTFIALFAA-------------------C----------------SHSGMVSEGM 630
             P E TF A+  A                   C                S    V E  
Sbjct: 297 --PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEAS 354

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAG-AWSSLLGA 688
            LFY+M +  GI      Y  +V      G+V+++ +L   +    FD+    +++LL  
Sbjct: 355 KLFYEMPEVDGIS-----YNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI 409

Query: 689 CRIHQNVEIG-EIAAQNL 705
             I  N++IG +I +Q +
Sbjct: 410 AAISLNLDIGRQIHSQTI 427


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/662 (37%), Positives = 376/662 (56%), Gaps = 27/662 (4%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           +++ Y+++G +   +  F      D+VSWN ++++   N  F    +F R M L+GI P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V I+  L AC+    +  G+ I    L   I  + S V +ALV MY           VF
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIE-EESIVQTALVSMYGKLGHCTDAASVF 119

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +S + +  W+AM+  Y +N +  EAL LF +M+ + G+ PN  T+ S + AC      
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMD-LDGVAPNKVTLVSGLDACASLGDL 178

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +H      G+     V  AL+++Y + GRIE +   F  +  ++ V+W+ +   Y
Sbjct: 179 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               ++ DA+ +L  M             DL+  V    PNS T ++VL  C A++AL +
Sbjct: 239 ARNDRNRDAIRVLHRM-------------DLEGLV----PNSTTFVSVLDACAAIAALKQ 281

Query: 523 GKEIH--AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
           G+ IH     +   L +DV V +ALV+MY+KCG L  A  +FD +   +++ WN +I   
Sbjct: 282 GRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATN 341

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG+ ++ LEL + M  EG     ++P  +TF ++  ACSH+GM+ +G   F     D+
Sbjct: 342 AQHGQTEKALELFERMRLEG-----LQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDH 396

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           GI P  +H+ C+VDLLGRAG + D+  L+  MP E     AW + LGACR ++N++    
Sbjct: 397 GIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPV-AWMAFLGACRTYRNMDRAIW 455

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+NLF L+P   + YVLLSN+Y+ A  W     +R+ M+     KE G SWIE  D +H
Sbjct: 456 AAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVH 515

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F++GD  H +  ++H  L+ L++ M++ GYVPDT  VLH+V +E KE ++  HSEKLA+
Sbjct: 516 EFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAM 575

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AF +L TP G+ IRV KNLRVCNDCH A+KFISK+ +REI++RD  RFH F+NG CSCGD
Sbjct: 576 AFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGD 635

Query: 881 YW 882
           YW
Sbjct: 636 YW 637



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 198/410 (48%), Gaps = 26/410 (6%)

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           +++ Y + G ++  V K FD +   D VSWN++IA       +D     FR ML   + P
Sbjct: 1   MLSAYSQIG-NIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINP 59

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
               +     AC++      + +GR +    L  G E  + +  AL++MY KLG   DA 
Sbjct: 60  GEVGISIFLSACTDARE---ITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAA 116

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
           ++F     RD+V+W+ +V++ ++N    EA+   RQM L G+ P+ V++ S L AC+ L 
Sbjct: 117 SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 176

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            L +G  +H       I      VG+ALV++Y  C  +E     F  I +K +  W+A+ 
Sbjct: 177 DLRSGALMHQRVEAQGIQ-SGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAIS 235

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
             Y +N+ + +A+ +  +M ++ GL PN+TT  SV+ AC    A      IH     LG 
Sbjct: 236 AAYARNDRNRDAIRVLHRM-DLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGG 294

Query: 418 G--RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G   D YV  AL++MYS+ G + ++  +FD +   D V WN++I      GQ   AL L 
Sbjct: 295 GLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELF 354

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
             M+                 +   +P  IT  +VL  C     L +G++
Sbjct: 355 ERMR-----------------LEGLQPTIITFTSVLFACSHAGMLDQGRK 387



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 21/382 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +   +  F    L +  M    I P        L A    +++++G+ I   +
Sbjct: 28  SWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAI 87

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G    S+ V   LV+MYGK G    D   VF R++ +D V+W++M+A   R G    
Sbjct: 88  LGTGIEEESI-VQTALVSMYGKLGHCT-DAASVFLRMSHRDVVAWSAMVAAYARNGHPRE 145

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           AL  FR M    V P+  TLVS   AC++L   R G  + ++V    ++ G     +  A
Sbjct: 146 ALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSG---VVVGTA 202

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K GR++ A   F    ++++V+W+ I ++ ++ND+  +A+  L +M L G+ P+
Sbjct: 203 LVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPN 262

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYA-LRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
             +  SVL AC+ +  L  G+ IH    +    L  + +V +ALV+MY  C  +     +
Sbjct: 263 STTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDM 322

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I+   + LWN++I    Q+   E+AL LF +M  + GL P   T +SV+ AC     
Sbjct: 323 FDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM-RLEGLQPTIITFTSVLFAC----- 376

Query: 402 FPDKEGIHGHAIKLGLGRDRYV 423
                    HA  L  GR  +V
Sbjct: 377 --------SHAGMLDQGRKHFV 390


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/635 (39%), Positives = 388/635 (61%), Gaps = 31/635 (4%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++ SL +     +A+  L Q       P   +   ++ +C+    L  G ++H + L 
Sbjct: 51  NPLIQSLCKQGNLNQALQVLSQEP----NPTQHTYELLILSCTRQNSLPQGIDLHRH-LI 105

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +D    + F+ + L++MY     ++  R+VFD    + I +WNA+        Y  E L 
Sbjct: 106 HDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLD 165

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFP----DKEGIHGHAIKLGLGRDRYVQNAL 427
           L+ +M  + G+  +  T + V+ ACV SEAF     +   IHGH ++ G     ++   L
Sbjct: 166 LYRRMNRI-GVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTL 224

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY+R G +  +  +FD M V++ VSW+ MI  Y+  G+  +AL L R+M  M E +  
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKM--MLENQ-- 280

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
               DL        PNS+T+++VL  C AL+AL +GK +H Y +R  L + + V SALV 
Sbjct: 281 ----DL-------LPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVT 329

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           +YA+CG L    RVF+ M  R+V++WN +I +YG+HG G++ +++ K M+ +G     + 
Sbjct: 330 VYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQG-----LS 384

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ ++F+++  ACSH+G+V EG  LF  M   + I PS +HYAC+VDLLGRA ++++A +
Sbjct: 385 PSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAK 444

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           +I+ M  E      W SLLG+CRIH NVE+ E A   LF LEP  A +YVLL++IY+ A+
Sbjct: 445 IIDDMRIE-PGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAK 503

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +W++   V+  ++  G++K PG S IE   +I+ F++ D  + Q EQLH  L  LS  M+
Sbjct: 504 MWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMK 563

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           ++GYVPDT  VL++++ EEKE ++ GHSEKLA+AFG++N+  G TIR+ KNLR+C DCH 
Sbjct: 564 EKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHS 623

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TKFISK  +REI++RDV RFH F++G CSCGDYW
Sbjct: 624 VTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 211/426 (49%), Gaps = 32/426 (7%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N +I +LC+ G  + AL+    +L     P+  T   + L+C+   R++ L  G  +H +
Sbjct: 51  NPLIQSLCKQGNLNQALQ----VLSQEPNPTQHTYELLILSCT---RQNSLPQGIDLHRH 103

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            +  G + + F+   L+ MY++L  +D+A+ +F     R +  WN +  +L+      E 
Sbjct: 104 LIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREV 163

Query: 268 VMFLRQMALRGIKPDGVSIASVLPAC----SHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
           +   R+M   G+  D  +   VL AC    + + +L  G+EIH + LR+     +  + +
Sbjct: 164 LDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHG-FEGHVHIMT 222

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVAGL 382
            L+DMY     V    RVFD +  K +  W+AMI  Y +N    EAL LF KM  E   L
Sbjct: 223 TLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDL 282

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN+ TM SV+ AC    A    + +HG+ ++ GL     V +AL+ +Y+R G +E+   
Sbjct: 283 LPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHR 342

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F+ ME RD VSWN++I+ Y I G    A+ + +EM              +D+ +    P
Sbjct: 343 VFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEM--------------IDQGL---SP 385

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRV 561
           + I+ ++VL  C     + +GK +    +R + +   V   + +VD+  +   L+ A ++
Sbjct: 386 SPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKI 445

Query: 562 FDLMPV 567
            D M +
Sbjct: 446 IDDMRI 451



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 213/437 (48%), Gaps = 34/437 (7%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVL 84
           P+TT  S       +      I+SL  +   NQ        +++   +  P    +  ++
Sbjct: 37  PSTTTRS----NGDSNNNNPLIQSLCKQGNLNQ-------ALQVLSQEPNPTQHTYELLI 85

Query: 85  KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
            +      L  G  +H H++  G       +A  L+NMY +  S + +  KVFD+  ++ 
Sbjct: 86  LSCTRQNSLPQGIDLHRHLIHDGSDQDPF-LATKLINMYSELDS-IDNARKVFDKTRKRT 143

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL-GR 203
              WN++   L   G     L+ +R M    V    FT   V  AC        L L GR
Sbjct: 144 IYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGR 203

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           ++HG+ LR G E +  IM  L+ MYA+ G V +A  +F     +++VSW+ +++  S+N 
Sbjct: 204 EIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNG 263

Query: 263 KFLEAVMFLRQMAL--RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           K LEA+   R+M L  + + P+ V++ SVL AC+ L  L+ GK +H Y LR    +D+  
Sbjct: 264 KPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRG--LDSIL 321

Query: 321 -VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            V SALV +Y  C  +E G RVF+ +  + +  WN++I+ YG + +  +A+ +F +M + 
Sbjct: 322 PVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMID- 380

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYS 432
            GL P+  +  SV+ AC  S A   +EG       + GH I   +  + Y    ++D+  
Sbjct: 381 QGLSPSPISFVSVLGAC--SHAGLVEEGKVLFESMVRGHKIFPSV--EHYA--CMVDLLG 434

Query: 433 RMGRIEISKTIFDDMEV 449
           R  R++ +  I DDM +
Sbjct: 435 RANRLDEAAKIIDDMRI 451


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/848 (31%), Positives = 455/848 (53%), Gaps = 44/848 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW  ++   AR+     A+  +  M    + PD  +  A+L A A + DLS G+  H  V
Sbjct: 8   SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +     S V VA  ++ MY +CGS +    + FD +  ++ VSW++MIA   + G    
Sbjct: 68  CEASGLGSDVVVATAVLTMYNRCGS-VSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGD 126

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMN 221
           ALE F  M +  V+ ++ T VSV  AC+++     + LG+ +H   +  G    +  + N
Sbjct: 127 ALELFVRMDHEGVKANAITFVSVLDACASMR---AIALGKSIHERIVADGLLGDDVILGN 183

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MY K G VD A+ +F+  E ++ V+WNT++++ S++D++ EA   L +M L G++P
Sbjct: 184 TIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRP 243

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + +++ SV+ AC+ ++ +  G+ +H       +  DN+ V +ALV++Y  C ++   R  
Sbjct: 244 NKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNT-VANALVNLYGKCGKLRAARHA 302

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
            + I  +    W  ++  Y ++ + + A+ +  +M+   G+  ++ T  +++ +CV   A
Sbjct: 303 LEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDH-EGVKLDSFTFVNLLESCVAIAA 361

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMIT 460
               E IH    + G+  D  +Q AL+DMY + G  + ++  FD M +VRD   WN ++ 
Sbjct: 362 LALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLA 421

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y +  Q  + L +   M                 ++    P+++T +++L  C +L+AL
Sbjct: 422 AYVLRDQGKETLGIFARM-----------------SLQGVAPDAVTFLSILDACASLAAL 464

Query: 521 AKGKEIHAYAI------RNMLATDVVVGSALVDMYAKCGCLNFARRVF---DLMPVRNVI 571
             G+  H+  +      R  +A+  ++ +++++MYAKCG L  A+  F         +V+
Sbjct: 465 GLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVV 524

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            W+ ++ AY   G  +E L    +M  EG     VKP+ V+F++  A CSHSG+V E + 
Sbjct: 525 AWSAMVAAYSQFGLSEEALRCFYSMQQEG-----VKPDSVSFVSAIAGCSHSGLVREAVA 579

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  ++ D+GI P+  H+AC+VDLL RAG + +A  L+   P     +  W +LL ACR 
Sbjct: 580 FFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHS-TWMTLLSACRT 638

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           + ++E     A  L  L     S Y LL++++  ++ WD   + R+ + E G   +PGCS
Sbjct: 639 YGDLERARRVAARLASLRS--GSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCS 696

Query: 752 WIEFGDEIHKFLAGDGSH-QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           WIE  + +++F AGD     + E++   LE L   +RK GY  D    +H+  E+EK+ L
Sbjct: 697 WIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFL 756

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEK+A+ FG+++TP GT +R+ KN+ VC DCH+  K IS++  R I LRD R FH 
Sbjct: 757 LSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQ 816

Query: 871 FKNGTCSC 878
           F +G+CSC
Sbjct: 817 FSHGSCSC 824



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 165/571 (28%), Positives = 275/571 (48%), Gaps = 61/571 (10%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + ++   SWN  IA   R G    ALE FR M    V P   + +++  A ++L     L
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLG---DL 57

Query: 200 RLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             G   H           +  +  A++ MY + G V  A+  F +   R++VSW+ ++++
Sbjct: 58  SQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAA 117

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +Q     +A+    +M   G+K + ++  SVL AC+ +  +  GK IH   + + +L D
Sbjct: 118 YAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGD 177

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           +  +G+ +V+MY  C EV+  R VF+ +  K    WN MI    +++  +EA  L  +M 
Sbjct: 178 DVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM- 236

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           ++ GL PN  T+ SV+ AC   ++      +H      GL  D  V NAL+++Y + G++
Sbjct: 237 DLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKL 296

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++   + +E RD +SW T++  Y   G    A+ +++ M +              E V
Sbjct: 297 RAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDH--------------EGV 342

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              K +S T + +L  C A++ALA G+EIH     + +  D V+ +ALVDMY KCG  + 
Sbjct: 343 ---KLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDA 399

Query: 558 ARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
           ARR FD M  VR+V  WN ++ AY +  +G+E L +   M  +G     V P+ VTF+++
Sbjct: 400 ARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQG-----VAPDAVTFLSI 454

Query: 617 FAAC-----------SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
             AC           +HS M+  G  LF    D   +  +      V+++  + G + DA
Sbjct: 455 LDACASLAALGLGRLTHSRMLERG--LF----DRQAVASADLLTTSVINMYAKCGSLADA 508

Query: 666 YQLINMMPPEFDKAG--------AWSSLLGA 688
                    EF KA         AWS+++ A
Sbjct: 509 -------KAEFAKARRARASDVVAWSAMVAA 532



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 239/487 (49%), Gaps = 28/487 (5%)

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           DR   SWN  ++  ++N     A+   R MAL G+ PD VS  ++L A + L  L  G+ 
Sbjct: 3   DRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEF 62

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
            H        L  +  V +A++ MY  C  V   RR FD +  + +  W+AMI  Y Q  
Sbjct: 63  FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYV 423
           +  +AL LF++M+   G+  NA T  SV+ AC    A    + IH   +  G LG D  +
Sbjct: 123 HPGDALELFVRMDH-EGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVIL 181

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            N +++MY + G +++++ +F+ ME ++ V+WNTMI   +   ++ +A  LL EM     
Sbjct: 182 GNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM----- 236

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                   DLD      +PN ITL++V+  C  + ++ +G+ +H       L +D  V +
Sbjct: 237 --------DLDGL----RPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVAN 284

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           ALV++Y KCG L  AR   + +  R+ I+W  ++ AY  HG G+  + ++K M  EG   
Sbjct: 285 ALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEG--- 341

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             VK +  TF+ L  +C     ++ G ++  ++ +  GIE  P     +VD+ G+ G  +
Sbjct: 342 --VKLDSFTFVNLLESCVAIAALALGEEIHDRLAES-GIELDPVLQTALVDMYGKCGNPD 398

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGA--CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
            A +  + M    D    W++LL A   R      +G  A  +L  + PD  +   +L  
Sbjct: 399 AARRAFDRMSDVRD-VTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDA 457

Query: 722 IYSSAQL 728
             S A L
Sbjct: 458 CASLAAL 464



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           A    L G +TR K SW   L + AR    + AI     M    ++ D+F F  +L++  
Sbjct: 298 AARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV 357

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVS 147
            I  L+LG++IH  + + G  L  V +   LV+MYGKCG+      + FDR+++ +D   
Sbjct: 358 AIAALALGEEIHDRLAESGIELDPV-LQTALVDMYGKCGNPD-AARRAFDRMSDVRDVTV 415

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN+++A      +    L  F  M    V P + T +S+  AC++L+    L LGR  H 
Sbjct: 416 WNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLA---ALGLGRLTHS 472

Query: 208 NSLRVGEWNT-------FIMNALMAMYAKLGRVDDAKTLF---KSFEDRDLVSWNTIVSS 257
             L  G ++         +  +++ MYAK G + DAK  F   +     D+V+W+ +V++
Sbjct: 473 RMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 532

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
            SQ     EA+     M   G+KPD VS  S +  CSH
Sbjct: 533 YSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSH 570


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/600 (39%), Positives = 360/600 (60%), Gaps = 36/600 (6%)

Query: 288 SVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++L  C+  ++L  G+ +H + +    R+D++++N+     L++MY  C  +E  R+VFD
Sbjct: 56  TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNT-----LLNMYAKCGSLEEARKVFD 110

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + ++    W  +I+GY Q++   +AL+LF +M    G  PN  T+SSV+ A        
Sbjct: 111 KMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRF-GFSPNEFTLSSVIKAAAAERRGC 169

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               +HG  +K G   + +V +AL+D+Y+R G ++ ++ +FD +E R+ VSWN +I G+ 
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229

Query: 464 I-CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
             CG    AL L    Q M  E  R              P+  +  ++   C +   L +
Sbjct: 230 RRCGTE-KALELF---QGMLREGFR--------------PSHFSYASLFGACSSTGFLEQ 271

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK +HAY I++        G+ L+DMYAK G ++ AR++FD +  R+V++WN ++ AY  
Sbjct: 272 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 331

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G E +   + M     R G ++PNE++F+++  ACSHSG++ EG   +  MK D GI
Sbjct: 332 HGFGNEAVCWFEEM-----RRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 385

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
                HY  +VDLLGRAG +  A + I  MP E   A  W +LL ACR+H+N E+G  AA
Sbjct: 386 VLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTELGAYAA 444

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           +++F L+PD    +V+L NIY+S   W+ A  VRKKMKE GV+KEP CSW+E  + IH F
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 504

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           +A D  H Q E++    E +  ++++ GYVPDTS V+ +V+++E+E  L  HSEK+A+AF
Sbjct: 505 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 564

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +LNTPPG+TI + KN+RVC DCH A K  SK   REII+RD  RFHHFK+G CSC DYW
Sbjct: 565 ALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 212/400 (53%), Gaps = 15/400 (3%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           ++  S I  D   +  +LK     + L+ G+ +H H+++  +    + + NTL+NMY KC
Sbjct: 41  DLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIF-RHDLVMNNTLLNMYAKC 99

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           GS + +  KVFD++ E+D V+W ++I+   +  +   AL  F  ML     P+ FTL SV
Sbjct: 100 GS-LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSV 158

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             A +  + R G   G Q+HG  ++ G + N  + +AL+ +Y + G +DDA+ +F + E 
Sbjct: 159 IKAAA--AERRGC-CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 215

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+ VSWN +++  ++     +A+   + M   G +P   S AS+  ACS    L+ GK +
Sbjct: 216 RNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWV 275

Query: 306 HAYALRN-DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           HAY +++ + L+  +F G+ L+DMY     +   R++FD ++ + +  WN+++T Y Q+ 
Sbjct: 276 HAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 333

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRY 422
           +  EA+  F +M    G+ PN  +  SV+ AC  S      EG H + +  K G+  + +
Sbjct: 334 FGNEAVCWFEEMRR-GGIRPNEISFLSVLTACSHSGLL--DEGWHYYELMKKDGIVLEAW 390

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
               ++D+  R G +  +    ++M +  T + W  ++  
Sbjct: 391 HYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 191/387 (49%), Gaps = 21/387 (5%)

Query: 199 LRLGRQVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L  GR VHG+ ++    +  +MN  L+ MYAK G +++A+ +F    +RD V+W T++S 
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            SQ+D+  +A++   QM   G  P+  +++SV+ A +       G ++H + ++      
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDS 185

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N  VGSAL+D+Y     ++  + VFD +  +    WNA+I G+ +    E+AL LF  M 
Sbjct: 186 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGML 245

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G  P+  + +S+  AC  +      + +H + IK G     +  N L+DMY++ G I
Sbjct: 246 R-EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 304

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++ IFD +  RD VSWN+++T Y   G   +A+    EM+       R  +       
Sbjct: 305 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMR-------RGGI------- 350

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              +PN I+ ++VL  C     L +G   +    ++ +  +      +VD+  + G LN 
Sbjct: 351 ---RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNR 407

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMH 583
           A R  + MP+      W  ++ A  MH
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMH 434



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 169/322 (52%), Gaps = 16/322 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   ++ ++  +A++ + +M R    P+ F   +V+KA A  +    G Q+H   
Sbjct: 119 TWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 178

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+  S+V V + L+++Y + G  M D   VFD +  ++ VSWN++IA   R    + 
Sbjct: 179 VKCGFD-SNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 236

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           ALE F+ ML     PS F+  S+  ACS+      L  G+ VH   ++ GE    F  N 
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTG---FLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DA+ +F     RD+VSWN+++++ +Q+    EAV +  +M   GI+P+
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYAL-RNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            +S  SVL ACSH  +LD G   H Y L + D ++  ++    +VD+     ++    R 
Sbjct: 354 EISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLN---RA 408

Query: 342 FDFISDKKI----ALWNAMITG 359
             FI +  I    A+W A++  
Sbjct: 409 LRFIEEMPIEPTAAIWKALLNA 430


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/635 (38%), Positives = 370/635 (58%), Gaps = 33/635 (5%)

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWN  +  L+    F E++   R M   G  PD  S   +L +C+ L +  +G+++H + 
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITGYGQNEYDE 367
           +R     +  FV +AL+ MYC C  VE  R+VF+    S +    +NA+I+GY  N    
Sbjct: 77  IRGGCEAE-PFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           +A  +F +M+E  G+  ++ T+  +VP C   E       +HG  +K G   +  V N+ 
Sbjct: 136 DAAFMFRRMKE-TGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSF 194

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           + MY + G +E  + +FD+M V+  ++WN +I+GY+  G   D L L  +M++       
Sbjct: 195 ITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKS------- 247

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                   + + P P   TL++VL  C  L A   G+E+      N  A +V + +AL+ 
Sbjct: 248 --------SGVCPDP--FTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALIS 297

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYA+CG L  AR VFD+MPV+++++W  +I  YGMHG G+  L L  +M+  G     ++
Sbjct: 298 MYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG-----IR 352

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+   F+ + +ACSHSG+  +G++LF  MK +Y +EP P+HY+C+VDLLGRAG++++A +
Sbjct: 353 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 412

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I+ MP E D A  W +LLGAC+IH+NV++ E+A   +   EP    +YVL+SNIYS ++
Sbjct: 413 FIDSMPVEPDGA-VWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSK 471

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
             +    +R  M+E   RK+PG S++E   ++H FLAGD SH+Q+E++H  L+ L     
Sbjct: 472 NQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDEL----- 526

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
            E  V + +  +     EE  +    HSE+LAIAFGILN+ PGT I V KNLRVC DCH 
Sbjct: 527 -ETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHV 585

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             K +SKI  R  ++RD  RFH+FK+G CSC DYW
Sbjct: 586 FIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 203/430 (47%), Gaps = 20/430 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   LR  A  + F E+I  Y  M RS   PD F+FP +LK+ A +     G+Q+H HV
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKW 161
           ++ G       V   L++MY KCG  + D  KVF+      Q  V +N++I+      K 
Sbjct: 77  IRGGCEAEPF-VLTALISMYCKCGL-VEDARKVFEENPHSSQLGVCYNALISGYTANSKV 134

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IM 220
             A   FR M  + V   S T++ +   C+     + L LGR +HG  ++ G ++   ++
Sbjct: 135 SDAAFMFRRMKETGVSVDSVTILGLVPLCT---VPEYLWLGRSLHGECVKGGTYSEVAVL 191

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           N+ + MY K G V+  + LF     + L++WN ++S  SQN    + +    QM   G+ 
Sbjct: 192 NSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVC 251

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  ++ SVL +C+HL     G+E+      N     N F+ +AL+ MY  C  +   R 
Sbjct: 252 PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANG-FAPNVFLSNALISMYARCGNLAKARA 310

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VFD +  K +  W AMI  YG +   E  L LF  M +  G+ P+      V+ AC  S 
Sbjct: 311 VFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIK-RGIRPDGAVFVMVLSACSHS- 368

Query: 401 AFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
              DK G+          KL  G + Y  + L+D+  R GR++ +    D M V  D   
Sbjct: 369 GLTDK-GLELFRAMKREYKLEPGPEHY--SCLVDLLGRAGRLDEAMEFIDSMPVEPDGAV 425

Query: 455 WNTMITGYTI 464
           W  ++    I
Sbjct: 426 WGALLGACKI 435


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/598 (38%), Positives = 359/598 (60%), Gaps = 32/598 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           + + AC+  + LD  ++IH + L +     ++F+ ++L+ +YC C  V    +VFD +  
Sbjct: 56  AFITACAQSKNLDDARKIHGH-LASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRK 114

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE- 406
           K +  W ++I GY QN+   EA+ L   M +     PN  T +S++ A   + A+ D   
Sbjct: 115 KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKA---AGAYADSGI 170

Query: 407 --GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              IH  A+K     D YV +AL+DMY+R G+++++  +FD ++ ++ VSWN +I+G+  
Sbjct: 171 GGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G    ALM+  EMQ       RN            +    T  ++  G   + AL +GK
Sbjct: 231 KGDGETALMVFAEMQ-------RNGF----------EATHFTYSSIFSGLAGIGALEQGK 273

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
            +HA+ +++       VG+ ++DMYAK G +  AR+VF+ +  ++++TWN ++ A+  +G
Sbjct: 274 WVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYG 333

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G+E +   + M   G     +  N++TF+ +  ACSH G+V EG   ++ M  +Y +EP
Sbjct: 334 LGKEAVSHFEEMRKSG-----IYLNQITFLCILTACSHGGLVKEGKH-YFDMIKEYNLEP 387

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HY  VVDLLGRAG +  A   I  MP E   A  W +LL ACR+H+N ++G+ AA +
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPME-PTAAVWGALLAACRMHKNAKVGQFAADH 446

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +F L+PD +   VLL NIY+S   WD A  VRK MK  GV+KEP CSW+E G+ +H F+A
Sbjct: 447 VFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVA 506

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D +H ++E+++   + +S ++RKEGYVPD   VL +V+E+E+E  L  HSEK+A+AF +
Sbjct: 507 NDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFAL 566

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  P G TIR+ KN+R+C DCH A K+ISK+  REI++RD  RFHHF NG+CSCGDYW
Sbjct: 567 IQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 197/411 (47%), Gaps = 26/411 (6%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN--SLRVGEWNTFIMNALMAMYAKLGRV 233
           + P+     +   AC+     D     R++HG+  S R  E + F+ N+L+ +Y K G V
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDD---ARKIHGHLASSRF-EGDAFLDNSLIHLYCKCGSV 102

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
            +A  +F     +D+VSW ++++  +QND   EA+  L  M     KP+G + AS+L A 
Sbjct: 103 VEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA 162

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
                   G +IHA A++ D   ++ +VGSAL+DMY  C +++    VFD +  K    W
Sbjct: 163 GAYADSGIGGQIHALAVKCD-WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           NA+I+G+ +    E ALM+F +M+   G      T SS+        A    + +H H +
Sbjct: 222 NALISGFARKGDGETALMVFAEMQR-NGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMV 280

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           K       +V N ++DMY++ G +  ++ +F+ +  +D V+WN+M+T +    Q+G    
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAF---AQYG---- 333

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L +E  +  EE  ++ +Y           N IT + +L  C     + +GK         
Sbjct: 334 LGKEAVSHFEEMRKSGIY----------LNQITFLCILTACSHGGLVKEGKHYFDMIKEY 383

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
            L  ++     +VD+  + G LN+A      MP+      W  ++ A  MH
Sbjct: 384 NLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
            +   ++ P    + A + A A  ++L   ++IH H+    +      + N+L+++Y KC
Sbjct: 41  HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFE-GDAFLDNSLIHLYCKC 99

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM---MLYSNVEPSSFTL 183
           GS + + +KVFD++ +KD VSW S+IA    + + D+  EA  +   ML    +P+ FT 
Sbjct: 100 GS-VVEAHKVFDKMRKKDMVSWTSLIAG---YAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFK 241
            S+  A    +      +G Q+H  +++  +W  + ++ +AL+ MYA+ G++D A  +F 
Sbjct: 156 ASLLKAAGAYADSG---IGGQIHALAVKC-DWHEDVYVGSALLDMYARCGKMDMATAVFD 211

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
             + ++ VSWN ++S  ++      A+M   +M   G +    + +S+    + +  L+ 
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQ 271

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK +HA+ +++   +  +FVG+ ++DMY     +   R+VF+ + +K +  WN+M+T + 
Sbjct: 272 GKWVHAHMVKSRQKL-TAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFA 330

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           Q    +EA+  F +M + +G++ N  T   ++ AC  S     KEG H
Sbjct: 331 QYGLGKEAVSHFEEMRK-SGIYLNQITFLCILTAC--SHGGLVKEGKH 375



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 21/301 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+++   EAI     M +   +P+ F F ++LKA     D  +G QIHA  
Sbjct: 119 SWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALA 178

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK  +    V V + L++MY +CG  DM     VFD++  K+ VSWN++I+   R G  +
Sbjct: 179 VKCDWH-EDVYVGSALLDMYARCGKMDM--ATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMN 221
            AL  F  M  +  E + FT  S+    S L+    L  G+ VH + ++  +    F+ N
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSI---FSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN 292

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            ++ MYAK G + DA+ +F+   ++DLV+WN+++++ +Q     EAV    +M   GI  
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 282 DGVSIASVLPACSHLEMLDTGK-------------EIHAYALRNDILIDNSFVGSALVDM 328
           + ++   +L ACSH  ++  GK             EI  Y    D+L     +  ALV +
Sbjct: 353 NQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFI 412

Query: 329 Y 329
           +
Sbjct: 413 F 413



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 22/248 (8%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P      + + AC +S+   D   IHGH        D ++ N+L+ +Y + G +  + 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  +D VSW ++I GY       +A+ LL  M                    R K
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKG-----------------RFK 149

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN  T  ++L   GA +    G +IHA A++     DV VGSAL+DMYA+CG ++ A  V
Sbjct: 150 PNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAV 209

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +N ++WN +I  +   G+G+  L +     AE  R G  +    T+ ++F+  +
Sbjct: 210 FDKLDSKNGVSWNALISGFARKGDGETALMVF----AEMQRNG-FEATHFTYSSIFSGLA 264

Query: 622 HSGMVSEG 629
             G + +G
Sbjct: 265 GIGALEQG 272


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/762 (33%), Positives = 425/762 (55%), Gaps = 46/762 (6%)

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M D  ++FD + + D   WN MI      G +  A++ +  M+++ V+  +FT   V  +
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
            + +S    L  G+++H   +++G   + ++ N+L+++Y KLG   DA+ +F+   +RD+
Sbjct: 140 VAGIS---SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196

Query: 249 VSWNTIVSS-LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           VSWN+++S  L+  D F  ++M  ++M   G KPD  S  S L ACSH+     GKEIH 
Sbjct: 197 VSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           +A+R+ I   +  V ++++DMY    EV    R+F+ +  + I  WN MI  Y +N    
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           +A + F KM E  GL P+  T  +++PA     A  +   IHG+A++ G      ++ AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETAL 371

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY   G+++ ++ IFD M  ++ +SWN++I  Y   G++  AL L +E+         
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL--------- 422

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                 D +++   P+S T+ ++LP      +L++G+EIHAY +++   ++ ++ ++LV 
Sbjct: 423 -----WDSSLV---PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYA CG L  AR+ F+ + +++V++WN IIMAY +HG G+  + L   M+A       V 
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-----SRVN 529

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PN+ TF +L AACS SGMV EG + F  MK +YGI+P  +HY C++DL+GR G    A +
Sbjct: 530 PNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            +  MP     A  W SLL A R H+++ I E AA+ +F +E D    YVLL N+Y+ A 
Sbjct: 590 FLEEMPF-VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W+    ++  M+  G+ +    S +E   + H F  GD SH  + +++  L+ +S RM 
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS-RM- 706

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCG-------HSEKLAIAFGILNTPPGTTIRVAKNLR 840
               V +    +H V+    ETL+         HS +LA  FG+++T  G  + V  N R
Sbjct: 707 ----VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTR 762

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C  CH+  +  S++  REI++ D + FHHF NG CSCG+YW
Sbjct: 763 ICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 176/645 (27%), Positives = 323/645 (50%), Gaps = 59/645 (9%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + EA+  Y  M  + ++ D F +P V+K+VAGI  L  GK+IHA V+K G+ +S V V N
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCN 169

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           +L+++Y K G   WD  KVF+ + E+D VSWNSMI+     G    +L  F+ ML    +
Sbjct: 170 SLISLYMKLGC-AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDD 235
           P  F+ +S   ACS++      ++G+++H +++  R+   +  +M +++ MY+K G V  
Sbjct: 229 PDRFSTMSALGACSHVY---SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACS 294
           A+ +F     R++V+WN ++   ++N +  +A +  ++M+ + G++PD ++  ++LPA +
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            LE    G+ IH YA+R   L  +  + +AL+DMY  C +++    +FD +++K +  WN
Sbjct: 346 ILE----GRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           ++I  Y QN  +  AL LF ++ + + L P++TT++S++PA   S +  +   IH + +K
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWD-SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
                +  + N+L+ MY+  G +E ++  F+ + ++D VSWN++I  Y + G    ++ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EM                    R  PN  T  ++L  C     + +G E      R  
Sbjct: 520 FSEM-----------------IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562

Query: 535 -LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMA------------- 579
            +   +     ++D+  + G  + A+R  + MP V     W  ++ A             
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622

Query: 580 ----YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI----ALFAACSHSGMVSEGMD 631
               + M  +      LL NM AE  R  +V  N +  +     +    S S + ++G  
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDV--NRIKLLMESKGISRTSSRSTVEAKGKS 680

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY-QLINMMPPE 675
             +   D   +  +  +   V+D++ R    ED Y   ++ + PE
Sbjct: 681 HVFTNGDRSHVATNKIYE--VLDVVSRMVGEEDIYVHCVSRLRPE 723



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 181/362 (50%), Gaps = 32/362 (8%)

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           + + R +E   ++FD ++     LWN MI G+       EA+  + +M   AG+  +  T
Sbjct: 74  FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFT 132

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
              V+ +     +  + + IH   IKLG   D YV N+L+ +Y ++G    ++ +F++M 
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            RD VSWN+MI+GY   G    +LML +EM                      KP+  + M
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-----------------FKPDRFSTM 235

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLAT-DVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + L  C  + +   GKEIH +A+R+ + T DV+V ++++DMY+K G +++A R+F+ M  
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           RN++ WNV+I  Y  +G   +     + M    S    ++P+ +T I L  A +    + 
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKM----SEQNGLQPDVITSINLLPASA----IL 347

Query: 628 EGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           EG  +  Y M+   G  P       ++D+ G  G+++ A  + + M  +     +W+S++
Sbjct: 348 EGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK--NVISWNSII 403

Query: 687 GA 688
            A
Sbjct: 404 AA 405



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  ++ +   A+  + E+  S + PD+    ++L A A    LS G++IHA++
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK  Y  S+  + N+LV+MY  CG D+ D  K F+ I  KD VSWNS+I      G   +
Sbjct: 458 VKSRY-WSNTIILNSLVHMYAMCG-DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           ++  F  M+ S V P+  T  S+  ACS
Sbjct: 516 SVWLFSEMIASRVNPNKSTFASLLAACS 543


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/582 (40%), Positives = 352/582 (60%), Gaps = 27/582 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALV-DMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           ++IHA+++R+ + + N  +G  L+  +   C  +    ++F  I +  I  WN MI GY 
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++E    AL L+ +M  V+ + P+  T   ++ A  +     + E +H  AI+ G     
Sbjct: 117 ESENPMPALELYRQMH-VSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLV 175

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +VQN L+ MY+  G  E +  +F+ M  R+ V+WN++I GY + G+  +AL L REM   
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG-- 233

Query: 482 EEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                           LR  +P+  T++++L  C  L ALA G+  H Y ++  L  ++ 
Sbjct: 234 ----------------LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 277

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            G+AL+D+YAKCG +  A +VFD M  ++V++W  +I+   ++G G+E LEL K +  +G
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 337

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                + P+E+TF+ +  ACSH GMV EG D F +MK++YGI P  +HY C+VDLLGRAG
Sbjct: 338 -----LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            V+ A++ I  MP +   A  W +LLGAC IH ++ +GE+A   L  LEP  +  YVLLS
Sbjct: 393 LVKQAHEFIQNMPMQ-PNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLS 451

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N+Y+S Q W     VR+ M   GV+K PG S +E  + +H+F+ GD SH Q+E+++  L 
Sbjct: 452 NLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLA 511

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            +++ ++ EGYVP  S VL ++ EEEKET L  HSEK+AIAF ++NT  G  IRV KNLR
Sbjct: 512 EITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLR 571

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH A K ISK+  REI++RD  RFHHFK+G CSC DYW
Sbjct: 572 VCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 192/375 (51%), Gaps = 10/375 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIHA  +++G  L++  +   L+       S M   +++F +I   +  +WN+MI    
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  ALE +R M  S +EP + T   +  A + L     +R G +VH  ++R G E 
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLM---DVREGEKVHSIAIRNGFES 173

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+ N L+ MYA  G  + A  LF+   +R+LV+WN++++  + N +  EA+   R+M 
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           LRG++PDG ++ S+L AC+ L  L  G+  H Y ++   L  N   G+AL+D+Y  C  +
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG-LDGNLHAGNALLDLYAKCGSI 292

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               +VFD + +K +  W ++I G   N + +EAL LF ++E   GL P+  T   V+ A
Sbjct: 293 RQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER-KGLMPSEITFVGVLYA 351

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DT 452
           C       D+   +   +K   G    +++   ++D+  R G ++ +     +M ++ + 
Sbjct: 352 CSHC-GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNA 410

Query: 453 VSWNTMITGYTICGQ 467
           V W T++   TI G 
Sbjct: 411 VVWRTLLGACTIHGH 425



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 146/260 (56%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R  A S     A+  Y +M  S I+PD   +P +LKA+A + D+  G+++H+  
Sbjct: 107 TWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIA 166

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  S V V NTLV+MY  CG      +K+F+ + E++ V+WNS+I      G+ + 
Sbjct: 167 IRNGFE-SLVFVQNTLVHMYAACG-HAESAHKLFELMAERNLVTWNSVINGYALNGRPNE 224

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  FR M    VEP  FT+VS+  AC+ L     L LGR+ H   ++VG + N    NA
Sbjct: 225 ALTLFREMGLRGVEPDGFTMVSLLSACAELG---ALALGRRAHVYMVKVGLDGNLHAGNA 281

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G +  A  +F   E++ +VSW +++  L+ N    EA+   +++  +G+ P 
Sbjct: 282 LLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPS 341

Query: 283 GVSIASVLPACSHLEMLDTG 302
            ++   VL ACSH  M+D G
Sbjct: 342 EITFVGVLYACSHCGMVDEG 361


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/787 (35%), Positives = 443/787 (56%), Gaps = 44/787 (5%)

Query: 55  SNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           +   R A+ +   M R  I+P D+  F ++LK+    +   LGK +HA ++++     SV
Sbjct: 39  AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSV 98

Query: 114 TVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            + N+L+++Y K G  +   DV++   R  ++D VSW++M+A     G+   A++ F   
Sbjct: 99  -LYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEF 157

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK 229
           L   + P+ +   +V  ACSN    D + +GR + G  ++ G  E +  +  +L+ M+ K
Sbjct: 158 LEMGLVPNDYCYTAVIRACSN---SDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 230 -LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                ++A  +F    + ++V+W  +++   Q     EA+ F   M L G + D  +++S
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFI 345
           V  AC+ LE L  G+++H++A+R+ +  D   V  +LVDMY  C     V+  R+VFD +
Sbjct: 275 VFSACAELENLSLGRQLHSWAIRSGLADD---VECSLVDMYAKCSADGSVDDCRKVFDRM 331

Query: 346 SDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
            D  +  W A+ITGY QN     EA+ LF +M     + PN  T SS   AC        
Sbjct: 332 QDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRV 391

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + + GHA K GL  +  V N+++ M+ +  R+E ++T F+ +  ++ VS+NT + G   
Sbjct: 392 GKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCR 451

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
                 A  LL E+   E                    ++ T  ++L G   + +L KG+
Sbjct: 452 NLDFEHAFELLSEIAERE-----------------LGVSAFTFASLLSGVANVGSLRKGE 494

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IH+  ++  L+ +  V +AL+ MY+KCG ++ A RVF LM  RNVI+W  +I  +  HG
Sbjct: 495 QIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHG 554

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             + VLE    M  EG     VKPNEVT++A+ +ACSH G+VSEG   F  M +D+ I+P
Sbjct: 555 FAERVLETFNQMTKEG-----VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HYAC+VDLL RAG + DA++ IN MP + D    W + LGACR+H N E+G++AA+ 
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD-VLVWRTFLGACRVHSNTELGKLAARK 668

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +   +P+  + Y+ LSNIY+SA  W+++ ++R+KMKE  + KE GCSWIE GD++HKF  
Sbjct: 669 ILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYV 728

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET----LLCGHSEKLAI 820
           GD SH  + Q++  L+ L   +++ GYVPDT  VLH + EE+ E     LL  HSEK+A+
Sbjct: 729 GDTSHPNAHQIYDELDWLITEIKRCGYVPDTDLVLHKLEEEDDEAKKEMLLYQHSEKIAV 788

Query: 821 AFGILNT 827
           AFG+++T
Sbjct: 789 AFGLIST 795



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 294/603 (48%), Gaps = 38/603 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +  +AI  ++E     + P+++ + AV++A +    + +G+ I   +
Sbjct: 133 SWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFL 192

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S V V  +L++M+ K  +   + YKVFD+++E + V+W  MI    + G    
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M+ S  E   FTL SV  AC+ L   + L LGRQ+H  ++R G  +  +  +L
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAEL---ENLSLGRQLHSWAIRSGLADD-VECSL 308

Query: 224 MAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-LEAVMFLRQMALRG- 278
           + MYAK    G VDD + +F   +D  ++SW  +++   QN     EA+    +M  +G 
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGH 368

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+  + +S   AC ++     GK++  +A +   L  NS V ++++ M+  C  +E  
Sbjct: 369 VEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRG-LASNSSVSNSVISMFVKCDRMEDA 427

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R  F+ +S+K +  +N  + G  +N   E A  L  ++ E   L  +A T +S++     
Sbjct: 428 RTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERE-LGVSAFTFASLLSGVAN 486

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +    E IH   +KLGL  ++ V NAL+ MYS+ G I+ +  +F  M+ R+ +SW +M
Sbjct: 487 VGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSM 546

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ITG+    +HG A  +L     M +E                KPN +T + +L  C  + 
Sbjct: 547 ITGF---AKHGFAERVLETFNQMTKEG--------------VKPNEVTYVAILSACSHVG 589

Query: 519 ALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            +++G +  ++    + +   +   + +VD+  + G L  A    + MP + +V+ W   
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIALFAACSHSGMVSEGMDLFYK 635
           + A  +H   +     L  + A   +  E  PNE   +I L    + +G   E  ++  K
Sbjct: 650 LGACRVHSNTE-----LGKLAAR--KILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRK 702

Query: 636 MKD 638
           MK+
Sbjct: 703 MKE 705


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/743 (34%), Positives = 410/743 (55%), Gaps = 35/743 (4%)

Query: 58  FREAILSYIEMTRSDIQPDNFAF-PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           F +AI  Y++        + F F P ++KA  G+ D++ GKQIH H++K+G+ L  + V 
Sbjct: 19  FEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGF-LQDIFVK 77

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+L+ MY KCG+   +   +F+R+ E+D VSWN+MI+  C+ G +  +L  FR M+    
Sbjct: 78  NSLLGMYWKCGAG-GNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMV-KEC 135

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
             S    V+   A S+ +    L  G ++HG  ++ G + + F+++AL+ MY K G + +
Sbjct: 136 GGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKN 195

Query: 236 AKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           A+ +F+   D +LV      WN ++     N+    A+    +M   GI PD  ++  VL
Sbjct: 196 AENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVL 255

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
             CS L  L  GK+IH   L    L D+  VG+AL++MY  C + E   ++F    +  +
Sbjct: 256 VLCSQLLDLAVGKQIHGLILGLG-LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNL 314

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
            +W +++    QN Y  EAL  F +     G +P+   + + + AC      P    IHG
Sbjct: 315 VMWGSVMLNCAQNGYPNEALEFFSEFMLDCG-FPDPVILLAALRACSFLSLKPRGMAIHG 373

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            AIK+G   D +V  AL+D Y + G +E ++ +F  +  RD VSWN +I+G+       +
Sbjct: 374 FAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADE 433

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL   R+MQ+ +                  KPN++T+  +L  C  LS +   KE+H Y 
Sbjct: 434 ALKAFRDMQSKQ-----------------IKPNTVTMACILSVCTHLSVMILCKEVHCYL 476

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           +R+   T+ +V ++L+  YAKCG ++ +R VF+ +PVRN +TWN I++ +GMHG   E+ 
Sbjct: 477 LRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMF 536

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
              + M     +   +KP+  TF +L ++CSHSG V  G   F  M +DY +EP  + Y 
Sbjct: 537 ATFEKM-----KEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYT 591

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+VDLLGRAG +  AY LI  MP   D    W SLL +C+ H N ++ E+ A ++F L+ 
Sbjct: 592 CMVDLLGRAGNLNQAYDLIMSMPCSPDDR-IWGSLLASCKNHGNTKLAEVVANHIFELDA 650

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
               + VLL+N+Y  +   ++   VR  +K+MG++K+PGCSWIE  + IH F+AGD SH 
Sbjct: 651 SSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHD 710

Query: 771 QSEQLHGFLENLSERMRKEGYVP 793
           +S  ++  +E+LS  M++ GYVP
Sbjct: 711 RSGDIYATIESLSLEMKRVGYVP 733



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 6/259 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + + A++    EA+  + E       PD     A L+A + +     G  IH   +
Sbjct: 317 WGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAI 376

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+  S V V   LV+ YGKCG DM    +VF  ++ +D VSWN++I+   +    D A
Sbjct: 377 KMGFD-SDVFVGGALVDFYGKCG-DMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEA 434

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNAL 223
           L+AFR M    ++P++ T+  +   C++LS    + L ++VH   LR   E N  + N+L
Sbjct: 435 LKAFRDMQSKQIKPNTVTMACILSVCTHLSV---MILCKEVHCYLLRHWFETNALVNNSL 491

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           ++ YAK G +  ++T+F+    R+ V+WN+I+     + +  E      +M    IKPD 
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDH 551

Query: 284 VSIASVLPACSHLEMLDTG 302
            +  S+L +CSH   +D G
Sbjct: 552 GTFTSLLSSCSHSGKVDAG 570



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G  TR   SW   +   A++    EA+ ++ +M    I+P+      +L     +  + L
Sbjct: 409 GLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMIL 468

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K++H +++++ +  +++ V N+L++ Y KCG D+     VF+++  +++V+WNS++   
Sbjct: 469 CKEVHCYLLRHWFETNAL-VNNSLISAYAKCG-DIHSSRTVFEKLPVRNEVTWNSILLGF 526

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
              G+ D     F  M  +N++P   T  S+  +CS+  + D
Sbjct: 527 GMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVD 568


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 404/748 (54%), Gaps = 38/748 (5%)

Query: 143 KDQVSWNSMIATLCRF--GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
           +D V+W  MI         +   A+  FR ML   V P   T+ +V     NL    G  
Sbjct: 97  RDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVL----NLPPASGGT 152

Query: 201 LGR----QVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                   +H  +L++G    N  + N L+  Y K G +  A+ +F+    RD V++N +
Sbjct: 153 AAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAM 212

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   S+     EA+     M  +G+     + ++VL   + +  L  G+++H    R   
Sbjct: 213 MMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR--A 270

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              N FV ++L+D Y  C  ++  +++F  + ++    +N MI GY  N      L LF 
Sbjct: 271 TSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFR 330

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M+ ++     A   +S++            + IH   + LGL  +  V NAL+DMYS+ 
Sbjct: 331 EMQSLS-FDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKC 389

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G ++ +KT F +   +  VSW  MITG    GQ  +AL L   M+       R  +    
Sbjct: 390 GMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMR-------RAGL---- 438

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P+  T  + +     L+ +  G+++H+Y IR+   + V  GSAL+DMY KCGC
Sbjct: 439 ------SPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGC 492

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L+ A + FD MP RN I+WN +I AY  +G+ +  +++ + M+  G      KP+ VTF+
Sbjct: 493 LDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG-----FKPDSVTFL 547

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           ++ +ACSH+G+  E M  F  M+ +YGI P  +HY+CV+D LGR G+ +   +++  MP 
Sbjct: 548 SVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPF 607

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E D    WSS+L +CR H N ++  +AA+ LF +    A+ YV+LSNI++ A  W+ A  
Sbjct: 608 E-DDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAG 666

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           V+K M++ G+RKE G SW+E   +++ F + D ++    ++   LE L + M K+GY PD
Sbjct: 667 VKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPD 726

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           TSC L  V+++ K   L  HSE+LAIAF ++NTPPGT IRV KNL  C DCH A K +SK
Sbjct: 727 TSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSK 786

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I +R+II+RD  RFHHFK+G CSCGDYW
Sbjct: 787 IVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 240/532 (45%), Gaps = 32/532 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLK---AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           +A+  + +M R  + PD      VL    A  G     +   +H   +K G   S+V V 
Sbjct: 119 DAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVC 178

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NTL++ Y K G  +    +VF  +  +D V++N+M+    + G    AL+ F  M    +
Sbjct: 179 NTLLDAYCKHGL-LAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGL 237

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
             + FT  +V    + +     L LGRQVHG   R    N F+ N+L+  Y+K   +D+ 
Sbjct: 238 AATRFTFSTVLTVATGVG---DLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEM 294

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           K LF    +RD VS+N +++  + N      +   R+M         +  AS+L     +
Sbjct: 295 KKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSV 354

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             +  GK+IHA  +    L     VG+AL+DMY  C  ++  +  F   +DK    W AM
Sbjct: 355 PHIGIGKQIHAQLVLLG-LSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAM 413

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           ITG  QN   EEAL LF  M   AGL P+  T SS + A            +H + I+ G
Sbjct: 414 ITGCVQNGQQEEALQLFCGMRR-AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSG 472

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                +  +AL+DMY++ G ++ +   FD+M  R+++SWN +I+ Y   GQ  +A+ +  
Sbjct: 473 HMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFE 532

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC---GALSALAKGKEIHAYAIRN 533
            M            Y         KP+S+T ++VL  C   G      K  E+  Y    
Sbjct: 533 GML----------CYGF-------KPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYG- 574

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            ++      S ++D   + G  +  + +   MP   + I W+ I+ +   HG
Sbjct: 575 -ISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHG 625



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 208/424 (49%), Gaps = 34/424 (8%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  +  M R  +    F F  VL    G+ DL LG+Q+H  V +     S+V V N+L
Sbjct: 224 EALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATS--SNVFVNNSL 281

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ Y KC   + ++ K+F  + E+D VS+N MIA         + L  FR M   + +  
Sbjct: 282 LDFYSKCDC-LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQ 340

Query: 180 SF---TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
           +    +L+SVA +  ++       +G+Q+H   + +G      + NAL+ MY+K G +D 
Sbjct: 341 ALPYASLLSVAGSVPHIG------IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDA 394

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           AKT F +  D+  VSW  +++   QN +  EA+     M   G+ PD  + +S + A S+
Sbjct: 395 AKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSN 454

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L M+  G+++H+Y +R+  +  + F GSAL+DMY  C  ++   + FD + ++    WNA
Sbjct: 455 LAMIGLGRQLHSYLIRSGHM-SSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNA 513

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK- 414
           +I+ Y      + A+ +F  M    G  P++ T  SV+ AC          G+    +K 
Sbjct: 514 VISAYAHYGQAKNAIKMFEGM-LCYGFKPDSVTFLSVLSAC-------SHNGLAEECMKY 565

Query: 415 -------LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICG 466
                   G+   +   + ++D   R+GR +  + +  +M    D + W++++     C 
Sbjct: 566 FELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHS---CR 622

Query: 467 QHGD 470
            HG+
Sbjct: 623 THGN 626



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ Q  EA+  +  M R+ + PD   F + +KA + +  + LG+Q+H+++
Sbjct: 409 SWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYL 468

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+ +SSV   + L++MY KCG  + +  + FD + E++ +SWN++I+    +G+   
Sbjct: 469 IRSGH-MSSVFSGSALLDMYTKCGC-LDEALQTFDEMPERNSISWNAVISAYAHYGQAKN 526

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A++ F  ML    +P S T +SV  ACS+    +      ++      +  W     + +
Sbjct: 527 AIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHY-SCV 585

Query: 224 MAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSS 257
           +    ++GR D  + +     FED D + W++I+ S
Sbjct: 586 IDTLGRVGRFDKVQEMLGEMPFED-DPIIWSSILHS 620


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/634 (41%), Positives = 373/634 (58%), Gaps = 29/634 (4%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM--LDTGKEIHAYALRN 312
           +++ S N    EA++F R+M   G +PD V+ + +L A + +    +D G+EIH YA R 
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYA-RI 59

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             L+ N  VG+A++ MY  C  ++  R  F+ +  K    WNAM+T Y  +  D EAL L
Sbjct: 60  SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 119

Query: 373 FIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG--LGRDRYVQNALMD 429
           F +M E      P+  + S  + AC   E       IH    + G  L +D  V  AL++
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179

Query: 430 MYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           MYS+ G +E ++ +FD +    D+V WN MI  Y   G+   AL L R M          
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH--------- 230

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                D T L PK    T +TV+  C  LSAL +G+ IHA         +++V +ALV M
Sbjct: 231 -----DTTDLAPKQG--TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHM 283

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y KCGCL+ A  VF  M +++ I+WN II +Y  HG   + L L + M  +G     VKP
Sbjct: 284 YGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQG-----VKP 338

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            EVTF+ L +ACSH G+V++G+D FY+M+DD+ I+PS  H+ C++DLLGR G++ +A  +
Sbjct: 339 TEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELV 398

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           +  MP + + A  W SLLGAC+ H +++ G  AA  +    P  +  YVLLSNIY++A  
Sbjct: 399 LKSMPIQAN-AVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGR 457

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W     +RK M   GV+K PG SWIE GD +H+F++GD SH Q E+++  L  + E M+ 
Sbjct: 458 WKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKG 517

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
            GYVPDTS V H++ EEEKE LL  HSEKLAI +G +  P  + +R+ KNLRVC DCH A
Sbjct: 518 LGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTA 577

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TKF+S+I  R+I++RD  RFH F+NG+CSC DYW
Sbjct: 578 TKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 27/430 (6%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNA 222
           AL  FR M  S   P   T  SV LA         +  GR++H  +   G   N  +  A
Sbjct: 13  ALVFFRRMYQSGERPDRVTF-SVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA--LRGIK 280
           +++MY K GR+DDA+  F+  + ++ V+WN ++++   + +  EA+   R+M    R  +
Sbjct: 72  VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVECGR 339
           PD  S +  + ACS+LE L+ G+EIH    R    L  +  VG+AL++MY  C ++E  R
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191

Query: 340 RVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +VFD I  D     WNAMI  Y Q+   ++AL L+  M +   L P   T  +V+  C  
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A      IH          +  V NAL+ MY + G ++ +  +F  M+++D +SWNT+
Sbjct: 252 LSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 311

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+ Y   G    AL+L +EM             DL       KP  +T + +L  C    
Sbjct: 312 ISSYAYHGHSDQALLLYQEM-------------DLQGV----KPTEVTFVGLLSACSHGG 354

Query: 519 ALAKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
            +A G + + Y +++   +   V     ++D+  + G L  A  V   MP++ N + W  
Sbjct: 355 LVADGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMS 413

Query: 576 IIMAYGMHGE 585
           ++ A   HG+
Sbjct: 414 LLGACKTHGD 423



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 208/433 (48%), Gaps = 43/433 (9%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL--GKQIHAHVVKYGYGLSSVTVAN 117
           EA++ +  M +S  +PD   F  +L A+A +   ++  G++IH +    G  L +V V  
Sbjct: 12  EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL-LPNVVVGT 70

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML--YSN 175
            +++MYGKCG  + D    F+ +  K+ V+WN+M+      G+   ALE FR M     +
Sbjct: 71  AVISMYGKCGR-LDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRS 129

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE---WNTFIMNALMAMYAKLGR 232
             P  F+      ACSNL   + L  GR++H    R G+    +  +  AL+ MY+K G 
Sbjct: 130 ARPDKFSFSIAIEACSNL---EDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGD 186

Query: 233 VDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGVSIASVL 290
           +++A+ +F S   D D V WN ++++ +Q+ +  +A+   R M     + P   +  +V+
Sbjct: 187 LEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVI 246

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
             C+ L  L  G+ IHA  +R      N  V +ALV MY  C  ++    VF  +  K  
Sbjct: 247 DVCAELSALKQGRAIHA-RVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 305

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WN +I+ Y  + + ++AL+L+ +M ++ G+ P   T   ++ AC            HG
Sbjct: 306 ISWNTIISSYAYHGHSDQALLLYQEM-DLQGVKPTEVTFVGLLSACS-----------HG 353

Query: 411 HAIKLGLGRDRYVQN------------ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNT 457
             +  GL     +Q+             ++D+  R GR+  ++ +   M ++ + V W +
Sbjct: 354 GLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMS 413

Query: 458 MITGYTICGQHGD 470
           ++     C  HGD
Sbjct: 414 LLGA---CKTHGD 423



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 152/268 (56%), Gaps = 13/268 (4%)

Query: 59  REAILSYIEM---TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL-SSVT 114
           REA+  + EM   +RS  +PD F+F   ++A + ++DL  G++IH  + + G  L   V 
Sbjct: 114 REALELFREMCERSRS-ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVV 172

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMML- 172
           V   L+NMY KCG D+ +  KVFD I  + D V WN+MIA   + G+   AL+ +R M  
Sbjct: 173 VGTALLNMYSKCG-DLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHD 231

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
            +++ P   T V+V   C+ LS    L+ GR +H        + N  + NAL+ MY K G
Sbjct: 232 TTDLAPKQGTFVTVIDVCAELS---ALKQGRAIHARVRATNFDANLLVSNALVHMYGKCG 288

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            +D+A  +F S + +D +SWNTI+SS + +    +A++  ++M L+G+KP  V+   +L 
Sbjct: 289 CLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLS 348

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNS 319
           ACSH  ++  G + + Y +++D  I  S
Sbjct: 349 ACSHGGLVADGLD-YFYRMQDDHRIKPS 375


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 413/760 (54%), Gaps = 57/760 (7%)

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           G C S +    +VF+ +  +  VS+N+MI+   R  K+ LA + F  M     E   F+ 
Sbjct: 60  GHCDSAL----RVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----PERDLFSW 111

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            +V L     +RR G     + H     + + +    NA+++ YA+ G VD+A+ +F   
Sbjct: 112 -NVMLTGYVRNRRLG-----EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM 165

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             R+ +SWN ++++   N +  EA    R++       + +S   ++       ML   +
Sbjct: 166 PHRNSISWNGLLAAYVHNGRLKEA----RRLFESQSNWELISWNCLMGGYVKRNMLGDAR 221

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++       D++  N+     ++  Y    ++   +R+F+    + +  W AM++GY QN
Sbjct: 222 QLFDRMPVRDVISWNT-----MISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQN 276

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              +EA   F +M        N  + ++++   V+ +    K  I G   +    R+   
Sbjct: 277 GMVDEARKYFDEMPV-----KNEISYNAMLAGYVQYK----KMVIAGELFEAMPCRNISS 327

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            N ++  Y + G I  ++ +FD M  RD VSW  +I+GY   G + +AL +  EM+   E
Sbjct: 328 WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
             NR+                 T    L  C  ++AL  GK++H   ++    T   VG+
Sbjct: 388 SSNRS-----------------TFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGN 430

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           AL+ MY KCG  + A  VF+ +  ++V++WN +I  Y  HG G++ L L ++M   G   
Sbjct: 431 ALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAG--- 487

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             VKP+E+T + + +ACSHSG++  G + FY M  DY ++P+  HY C++DLLGRAG++E
Sbjct: 488 --VKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLE 545

Query: 664 DAYQLINMMPPEFDK-AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           +A  L+  MP  FD  A +W +LLGA RIH N E+GE AA+ +F +EP  +  YVLLSN+
Sbjct: 546 EAENLMRNMP--FDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 603

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+++  W     +R KM+E GV+K  G SW+E  ++IH F  GD  H + ++++ FLE L
Sbjct: 604 YAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEEL 663

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
             +MR+EGYV  T  VLH+V EEEKE +L  HSEKLA+AFGIL  P G  IRV KNLRVC
Sbjct: 664 DLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVC 723

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A K ISKI  R IILRD  RFHHF  G CSCGDYW
Sbjct: 724 QDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 166/393 (42%), Gaps = 45/393 (11%)

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           F+D D+V+WN  +SS  +N     A+     M  R      VS  +++        L   
Sbjct: 41  FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRR----SSVSYNAMISG-----YLRNA 91

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K   A  L + +   + F  + ++  Y   R +    ++FD +  K +  WNAM++GY Q
Sbjct: 92  KFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQ 151

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N + +EA  +F KM        N+ + + ++ A V +    +   +        L     
Sbjct: 152 NGFVDEAREVFNKMPH-----RNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL----I 202

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE----- 477
             N LM  Y +   +  ++ +FD M VRD +SWNTMI+GY   G    A  L  E     
Sbjct: 203 SWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRD 262

Query: 478 ---MQNMEEEKNRNNVYD-----LDETVLRPKPNSITLMTVLPGCGALSALA-KGKEIHA 528
                 M     +N + D      DE    P  N I+   +L G      +   G+   A
Sbjct: 263 VFTWTAMVSGYVQNGMVDEARKYFDEM---PVKNEISYNAMLAGYVQYKKMVIAGELFEA 319

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
              RN+ + + ++       Y + G +  AR++FD+MP R+ ++W  II  Y  +G  +E
Sbjct: 320 MPCRNISSWNTMITG-----YGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEE 374

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            L    NM  E  R GE   N  TF    + C+
Sbjct: 375 AL----NMFVEMKRDGE-SSNRSTFSCALSTCA 402



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  + EA+  ++EM R     +   F   L   A I  L LGKQ+H  V
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+  +   V N L+ MY KCGS   +   VF+ I EKD VSWN+MIA   R G    
Sbjct: 418 VKAGFE-TGCFVGNALLGMYFKCGSTD-EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQ 475

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL  F  M  + V+P   T+V V  ACS+
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSH 504


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/608 (39%), Positives = 359/608 (59%), Gaps = 34/608 (5%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYCNCRE 334
           ++PD     ++L  C+ L  L  GK +H + L    ++D++I NS     L+ MY  C  
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNS-----LLFMYARCGS 124

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E  RR+FD +  + +  W +MITGY QN+   +AL+LF +M    G  PN  T+SS+V 
Sbjct: 125 LEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLS-DGAEPNEFTLSSLVK 183

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
            C    ++     IH    K G   + +V ++L+DMY+R G +  +  +FD +  ++ VS
Sbjct: 184 CCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS 243

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I GY   G+  +AL L   MQ    E  R              P   T   +L  C
Sbjct: 244 WNALIAGYARKGEGEEALALFVRMQ---REGYR--------------PTEFTYSALLSSC 286

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            ++  L +GK +HA+ +++       VG+ L+ MYAK G +  A +VFD +   +V++ N
Sbjct: 287 SSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCN 346

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +++ Y  HG G+E  +    M+  G     ++PN++TF+++  ACSH+ ++ EG   F 
Sbjct: 347 SMLIGYAQHGLGKEAAQQFDEMIRFG-----IEPNDITFLSVLTACSHARLLDEGKHYFG 401

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M+  Y IEP   HYA +VDLLGRAG ++ A   I  MP E      W +LLGA ++H+N
Sbjct: 402 LMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE-PTVAIWGALLGASKMHKN 459

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
            E+G  AAQ +F L+P     + LL+NIY+SA  W+    VRK MK+ GV+KEP CSW+E
Sbjct: 460 TEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVE 519

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
             + +H F+A D +H Q E++H   E L++++++ GYVPDTS VL  V+++EKE  L  H
Sbjct: 520 VENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYH 579

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLA++F +LNTPPG+TIR+ KN+RVC DCH A K++S +  REII+RD  RFHHF +G
Sbjct: 580 SEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDG 639

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 640 FCSCGDYW 647



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 226/483 (46%), Gaps = 44/483 (9%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL-------- 163
           S +V  +L+ +   C  D+      F R+       W    +T C     +L        
Sbjct: 8   SSSVLKSLLQIVSPCKRDLGS----FRRL-------WQHSESTFCVIDDRNLLRPSLNSK 56

Query: 164 -ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             L    ++   ++EP      ++   C+ L +   L+ G+ VH + L    + +  I N
Sbjct: 57  TGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGK---LKEGKLVHFHVLNSNFKHDLVIQN 113

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MYA+ G ++ A+ LF     RD+VSW ++++  +QND+  +A++   +M   G +P
Sbjct: 114 SLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEP 173

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  +++S++  C ++   + G++IHA   +      N FVGS+LVDMY  C  +     V
Sbjct: 174 NEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCH-SNVFVGSSLVDMYARCGYLGEAMLV 232

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  K    WNA+I GY +    EEAL LF++M+   G  P   T S+++ +C     
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQR-EGYRPTEFTYSALLSSCSSMGC 291

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H H +K       YV N L+ MY++ G I  ++ +FD +   D VS N+M+ G
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y    QHG    L +E     +E  R  +          +PN IT ++VL  C     L 
Sbjct: 352 Y---AQHG----LGKEAAQQFDEMIRFGI----------EPNDITFLSVLTACSHARLLD 394

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           +GK       +  +   V   + +VD+  + G L+ A+   + MP+   V  W  ++ A 
Sbjct: 395 EGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGAS 454

Query: 581 GMH 583
            MH
Sbjct: 455 KMH 457



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 194/389 (49%), Gaps = 9/389 (2%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD   +  +LK    +  L  GK +H HV+   +    + + N+L+ MY +CGS +  
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFK-HDLVIQNSLLFMYARCGS-LEG 127

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             ++FD +  +D VSW SMI    +  +   AL  F  ML    EP+ FTL S+   C  
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY 187

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           ++  +    GRQ+H    + G   N F+ ++L+ MYA+ G + +A  +F     ++ VSW
Sbjct: 188 MASYN---CGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSW 244

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N +++  ++  +  EA+    +M   G +P   + +++L +CS +  L+ GK +HA+ ++
Sbjct: 245 NALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMK 304

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +   +   +VG+ L+ MY     +    +VFD +    +   N+M+ GY Q+   +EA  
Sbjct: 305 SSQKL-VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQ 363

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
            F +M    G+ PN  T  SV+ AC  +    + +   G   K  +         ++D+ 
Sbjct: 364 QFDEMIRF-GIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLL 422

Query: 432 SRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
            R G ++ +K+  ++M +  TV+ W  ++
Sbjct: 423 GRAGLLDQAKSFIEEMPIEPTVAIWGALL 451



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 187/380 (49%), Gaps = 38/380 (10%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           +   L P+ T  ++++  C +     + + +H H +      D  +QN+L+ MY+R G +
Sbjct: 66  DCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSL 125

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E ++ +FD+M  RD VSW +MITGY    +  DAL+L   M +   E             
Sbjct: 126 EGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE------------- 172

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               PN  TL +++  CG +++   G++IHA   +    ++V VGS+LVDMYA+CG L  
Sbjct: 173 ----PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGE 228

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  VFD +  +N ++WN +I  Y   GEG+E L L   M  EG R     P E T+ AL 
Sbjct: 229 AMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYR-----PTEFTYSALL 283

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
           ++CS  G + +G  L  + MK    +     +   ++ +  ++G + DA ++ + +  + 
Sbjct: 284 SSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN--TLLHMYAKSGSIRDAEKVFDKL-VKV 340

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNL-----FLLEPDVASHYVLLSNIYSSAQLWDK 731
           D     S L+G    +    +G+ AAQ       F +EP+  +   +L+   S A+L D+
Sbjct: 341 DVVSCNSMLIG----YAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTAC-SHARLLDE 395

Query: 732 AMDVRKKMKEMGVRKEPGCS 751
                  M++  +  EP  S
Sbjct: 396 GKHYFGLMRKYNI--EPKVS 413



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 180/355 (50%), Gaps = 10/355 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++++  +A+L +  M     +P+ F   +++K    +   + G+QIHA  
Sbjct: 142 SWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACC 201

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            KYG   S+V V ++LV+MY +CG  + +   VFD++  K++VSWN++IA   R G+ + 
Sbjct: 202 WKYGCH-SNVFVGSSLVDMYARCGY-LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
           AL  F  M      P+ FT  ++  +CS++     L  G+ +H + ++  +    ++ N 
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMG---CLEQGKWLHAHLMKSSQKLVGYVGNT 316

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DA+ +F      D+VS N+++   +Q+    EA     +M   GI+P+
Sbjct: 317 LLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPN 376

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRV 341
            ++  SVL ACSH  +LD GK  H + L     I+      A +VD+      ++  +  
Sbjct: 377 DITFLSVLTACSHARLLDEGK--HYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSF 434

Query: 342 FDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
            + +  +  +A+W A++     ++  E       ++ E+   +P   T+ + + A
Sbjct: 435 IEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYA 489



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 4/154 (2%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK   SW   +   AR  +  EA+  ++ M R   +P  F + A+L + + +  L  GK 
Sbjct: 238 CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKW 297

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HAH++K    L    V NTL++MY K GS + D  KVFD++ + D VS NSM+    + 
Sbjct: 298 LHAHLMKSSQKLVGY-VGNTLLHMYAKSGS-IRDAEKVFDKLVKVDVVSCNSMLIGYAQH 355

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           G    A + F  M+   +EP+  T +SV  ACS+
Sbjct: 356 GLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSH 389


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/749 (34%), Positives = 415/749 (55%), Gaps = 34/749 (4%)

Query: 45   WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
            W   +    +   F E +  +  M    I+PD ++   VL     +     G+QIH +++
Sbjct: 515  WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYII 574

Query: 105  KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ-VSWNSMIATLCRFGKWDL 163
            +  +      +   L+ MY  C   M + + +F ++  +   V+WN MI      G W+ 
Sbjct: 575  RNMFE-GDPYLETALIGMYSSCSRPM-EAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 632

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +LE + +    N +  S +      ACS+    + L  GRQVH + +++  + + ++  +
Sbjct: 633  SLELYSLAKNENCKLVSASFTGAFTACSH---GEVLDFGRQVHCDVIKMNFQDDPYVCTS 689

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYAK G V+DAK +F    D+++   N ++S+   N +  +A+    +M       D
Sbjct: 690  LLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVD 749

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
              +I+S+L  CS +   D G+ +HA  ++   +  N  + SAL+ MY  C   E    VF
Sbjct: 750  SFTISSLLSGCSVVGSYDFGRTVHAEVIKRS-MQSNVAIQSALLTMYYKCGSTEDADSVF 808

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              + ++ +  W +MI G+ QN   ++AL LF  ME+  G+  ++  M+SV+ A +  E  
Sbjct: 809  YTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEK-EGVKADSDVMTSVISAGLGLENV 867

Query: 403  PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 IHG AIK GL  D +V  +L+DMYS+ G  E ++ +F  M  ++ V+WN+MI+ Y
Sbjct: 868  ELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCY 927

Query: 463  TICGQHGDALMLLREMQ-NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            +  G        L EM  N+  +  ++  Y LD         S+++ TVL    +++AL 
Sbjct: 928  SWNG--------LPEMSINLLPQILQHGFY-LD---------SVSITTVLVAVSSVAALL 969

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            KGK +HAY IR  + +D+ V +AL+DMY KCGCL +A+ +F+ MP RN++TWN +I  YG
Sbjct: 970  KGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYG 1029

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             HG  +E + L K M     +  E  P+EVTF+AL  +CSHSGMV EG++LF  M+ +YG
Sbjct: 1030 SHGNCEEAVRLFKEM-----KRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYG 1084

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            +EP  +HYA VVDLLGRAG+++DAY  I  MP + D++  W  LL ACR H+N+E+GE+ 
Sbjct: 1085 VEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRS-VWLCLLFACRAHRNMELGELV 1143

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            A NL  +EP   S+YV L N+Y   ++WD+A ++R  MK  G++K PGCSWIE  + +  
Sbjct: 1144 ADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDV 1203

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEG 790
            F +GD S  +  +++  L +L   M  +G
Sbjct: 1204 FFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 182/659 (27%), Positives = 317/659 (48%), Gaps = 41/659 (6%)

Query: 46   IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK 105
            +E +++  +  ++ +A+  + +   S +    F FP++LK  A + +L  G+ IHA +V 
Sbjct: 410  VEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 469

Query: 106  YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK-----DQVSWNSMIATLCRFGK 160
             G   S   +A +L+NMY KCG  +    +VFD+++E      D   WN +I    ++G 
Sbjct: 470  MGLQ-SDPYIATSLINMYVKCGL-LGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 527

Query: 161  WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFI 219
            ++  L  F  M    + P  ++L  V   C+ LS       GRQ+HG  +R + E + ++
Sbjct: 528  FEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLS---WYMAGRQIHGYIIRNMFEGDPYL 584

Query: 220  MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
              AL+ MY+   R  +A +LF   E+R ++V+WN ++    +N  + +++          
Sbjct: 585  ETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNEN 644

Query: 279  IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
             K    S      ACSH E+LD G+++H   ++ +   D+ +V ++L+ MY     VE  
Sbjct: 645  CKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ-DDPYVCTSLLTMYAKSGSVEDA 703

Query: 339  RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP-NATTMSSVVPACV 397
            ++VFD + DK++ L NAMI+ +  N    +AL L+ KM+  AG  P ++ T+SS++  C 
Sbjct: 704  KKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK--AGETPVDSFTISSLLSGCS 761

Query: 398  RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
               ++     +H   IK  +  +  +Q+AL+ MY + G  E + ++F  M+ RD V+W +
Sbjct: 762  VVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGS 821

Query: 458  MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
            MI G+    +  DAL L R M+               E V   K +S  + +V+     L
Sbjct: 822  MIAGFCQNRRFKDALDLFRAMEK--------------EGV---KADSDVMTSVISAGLGL 864

Query: 518  SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
              +  G  IH +AI+  L +DV V  +LVDMY+K G    A  VF  MP +N++ WN +I
Sbjct: 865  ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 924

Query: 578  MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
              Y  +G  +  + LL  ++  G     V    V       A    G       +  ++ 
Sbjct: 925  SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 984

Query: 638  DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             D  +E +      ++D+  + G ++ A  +   MP        W+S++     H N E
Sbjct: 985  SDLQVENA------LIDMYVKCGCLKYAQLIFENMPRR--NLVTWNSMIAGYGSHGNCE 1035


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/635 (37%), Positives = 367/635 (57%), Gaps = 33/635 (5%)

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++  L  + +  +A   L+ +      P   +  S+L A +          +H     + 
Sbjct: 223 LIQMLCAHGRLAQATALLQGLP----APTQRTYESLLLAAARARDTALAAAVHRRLEADP 278

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +   + F+ + L++ Y     +   R+VFD    K I +WNAM+      ++ EEAL   
Sbjct: 279 VFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCL 338

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEA--FPDKEGI---HGHAIKLGLGRDRYVQNALM 428
             M  + G+  ++ + +  + AC+ + A   P    +   H HAI+ G G   +V   L+
Sbjct: 339 ADMGRL-GVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLI 397

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           D Y+++G +  ++ +F  M  R+ VSW+ MI  Y    + GDA+ + +EM          
Sbjct: 398 DCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMM--------- 448

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
              D D       PNSIT+++VL  C  ++AL +GK +HAY +R      V V +AL+ M
Sbjct: 449 -ASDADLV-----PNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAM 502

Query: 549 YAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           Y KCGCL   R +F+ +   RNV++WN +I  YGMHG G+E L++ + M+ EG     + 
Sbjct: 503 YMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEG-----IS 557

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PN +TF+++  ACSH G+V +G  LF  M + Y + P  +HYAC+VDLLGRAG++++A +
Sbjct: 558 PNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAVE 616

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  M  +      W SLLGACRIH +VE  E+A  +LF LEP  A +YVLL++IY+ A+
Sbjct: 617 LIQSMRIQ-PSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAK 675

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           L ++   +++ ++E  + K PGCSWIE   +++ F++ D  + Q E+L   +     +M+
Sbjct: 676 LQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMK 735

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
            EGYVPDT  VL+++ EEEKE +L GHSEKLA+AFG++ T  G  IR+ KNLR+C DCH 
Sbjct: 736 NEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHS 795

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TKFISK   REI++RDV RFHHF+NG CSC DYW
Sbjct: 796 VTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 215/459 (46%), Gaps = 25/459 (5%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P    + ++L A A  +D +L   +H  +       S   ++  L+  Y    S +    
Sbjct: 246 PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAAL-SALPAAR 304

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SN 192
           +VFD    K+   WN+M+  L      + AL     M    V   S++      AC  ++
Sbjct: 305 QVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAAS 364

Query: 193 LSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            S        R++H +++R G   +T +   L+  YAKLG V  A+ +F S  DR+LVSW
Sbjct: 365 ASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSW 424

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           + ++   ++N++  +A+   ++M      + P+ ++I SVL AC+ +  L  GK +HAY 
Sbjct: 425 SAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYI 484

Query: 310 LRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK-IALWNAMITGYGQNEYD 366
           LR   D+L+    V +AL+ MY  C  +E GR +F++I  ++ +  WN++I+GYG + + 
Sbjct: 485 LRRGFDLLVS---VLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFG 541

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
            E+L +F +M E  G+ PN  T  SV+ AC         + +    ++  +         
Sbjct: 542 RESLQVFEEMIE-EGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYAC 600

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           ++D+  R GR++ +  +   M ++ +   W +++    I G    A M    + ++ E +
Sbjct: 601 MVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDL-EPR 659

Query: 486 NRNNVYDLDETVLRPK-PNSITLMTVL---------PGC 514
           N  N   L +   R K  N + ++  L         PGC
Sbjct: 660 NAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 148/270 (54%), Gaps = 14/270 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG-----KQI 99
           W   L++ A ++   EA+    +M R  +  D++++   LKA        L      +++
Sbjct: 318 WNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREM 377

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HAH ++ GYGL +  VA TL++ Y K G   +   +VF  + +++ VSW++MI    +  
Sbjct: 378 HAHAIRRGYGLHT-HVATTLIDCYAKLGIVSY-AERVFTSMPDRNLVSWSAMIGCYAKNE 435

Query: 160 KWDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
           +   A++ F+ M+ S+ +  P+S T+VSV  AC+ +   + L  G+ +H   LR G +  
Sbjct: 436 RPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGV---NALGQGKVLHAYILRRGFDLL 492

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             ++NALMAMY K G ++  + +F      R++VSWN+++S    +    E++    +M 
Sbjct: 493 VSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMI 552

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
             GI P+ ++  SVL ACSH+ +++ GK++
Sbjct: 553 EEGISPNIITFVSVLGACSHVGLVEQGKKL 582


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/640 (39%), Positives = 355/640 (55%), Gaps = 54/640 (8%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L AC   + L   K+IH + L+N    D+S V   L  +Y +C +V   RR+FD I + 
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSS-VLHKLTRLYLSCNQVVLARRLFDEIPNP 72

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            + LWN +I  Y  N   + A+ L+  M  + G+ PN  T   V+ AC    A  D   I
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHL-GVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG---YTIC 465
           H HA   GL  D +V  AL+D Y++ G +  ++ +F  M  RD V+WN MI G   Y +C
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK------------------------ 501
                 +M ++E            V    + +L  +                        
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 251

Query: 502 -------------------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                              P+  T++ VLP C  L+AL  G   H Y I    ATD ++ 
Sbjct: 252 DCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC 311

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL+DMY+KCG ++FAR VF+ M   ++++WN +I+ YG+HG G E L L  +++A G  
Sbjct: 312 NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-- 369

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              +KP+++TFI L ++CSHSG+V EG   F  M  D+ I P  +H  C+VD+LGRAG +
Sbjct: 370 ---LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLI 426

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A+  I  MP E D    WS+LL ACRIH+N+E+GE  ++ +  L P+   ++VLLSNI
Sbjct: 427 DEAHHFIRNMPFEPD-VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNI 485

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           YS+A  WD A  +R   K+ G++K PGCSWIE    +H F+ GD SH Q  Q++  LE L
Sbjct: 486 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 545

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
              M++ GY  + S V  +V EEEKE +L  HSEKLAIAFGILN   G  I V KNLRVC
Sbjct: 546 LVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVC 605

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A KF++ I  REI +RD  RFHHFKNGTC+CGD+W
Sbjct: 606 GDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 241/525 (45%), Gaps = 68/525 (12%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+A    + L+  K+IH H +K      S +V + L  +Y  C   +    ++FD I  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADS-SVLHKLTRLYLSCNQVVL-ARRLFDEIPN 71

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
              + WN +I      G +D A++ +  ML+  V P+ +T   V  ACS L     +  G
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLL---AIEDG 128

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            ++H ++   G E + F+  AL+  YAK G + +A+ LF S   RD+V+WN +++  S  
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
               +AV  + QM   GI P+  +I  VLP C  L           YA            
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL----------LYA------------ 226

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                            R++FD +  +    W+AMI GY  ++  +EAL +F +M +++G
Sbjct: 227 -----------------RKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF-RMMQLSG 268

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           + P+ TTM  V+PAC    A       HG+ I  G   D  + NAL+DMYS+ G+I  ++
Sbjct: 269 IDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 328

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F+ M+  D VSWN MI GY I G   +AL L  ++                   L  K
Sbjct: 329 EVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL-----------------LALGLK 371

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARR 560
           P+ IT + +L  C     + +G+       R+  +   +     +VD+  + G ++ A  
Sbjct: 372 PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHH 431

Query: 561 VFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
               MP   +V  W+ ++ A  +H     G+EV + ++++  E +
Sbjct: 432 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 476



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 165/355 (46%), Gaps = 44/355 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W + +R+ A +  F  AI  Y  M    ++P+ + +P VLKA +G+  +  G +IH+H  
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            +G   S V V   LV+ Y KCG  + +  ++F  ++ +D V+WN+MIA    +G  D A
Sbjct: 137 MFGLE-SDVFVCTALVDFYAKCGI-LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           ++    M    + P+S T+V V   C  L                               
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTCQCL------------------------------- 223

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            +Y        A+ +F     R+ VSW+ ++     +D   EA+   R M L GI PD  
Sbjct: 224 -LY--------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLT 274

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           ++  VLPACSHL  L  G   H Y +      D + + +AL+DMY  C ++   R VF+ 
Sbjct: 275 TMLGVLPACSHLAALQHGFCSHGYLIVRGFATD-TLICNALIDMYSKCGKISFAREVFNR 333

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +    I  WNAMI GYG +    EAL LF  +  + GL P+  T   ++ +C  S
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL-GLKPDDITFICLLSSCSHS 387



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 2/154 (1%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
            R + SW   +     S+  +EA+  +  M  S I PD      VL A + +  L  G  
Sbjct: 235 VRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 294

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H +++  G+   ++ + N L++MY KCG   +   +VF+R+   D VSWN+MI      
Sbjct: 295 SHGYLIVRGFATDTL-ICNALIDMYSKCGKISF-AREVFNRMDRHDIVSWNAMIIGYGIH 352

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           G    AL  F  +L   ++P   T + +  +CS+
Sbjct: 353 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSH 386


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/582 (41%), Positives = 347/582 (59%), Gaps = 29/582 (4%)

Query: 301  TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            T  +I AY L+ D  I   F       MY +   ++    VF+ I +    LWN MI G+
Sbjct: 739  THAKIFAYGLQYDSRILTKFA-----IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGF 793

Query: 361  GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
              +     +L L+ KM E  GL P+       + +C         + IH H +  G   D
Sbjct: 794  ATDGRFLSSLELYSKMME-KGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSND 852

Query: 421  RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
             +V  AL+DMY++ G IE ++ +FD M VRD VSW +MI+GY   G + + L     M++
Sbjct: 853  LFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912

Query: 481  MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                            V+   PN +++++VL  CG L AL KG+  H+Y I+     D++
Sbjct: 913  --------------SGVI---PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDIL 955

Query: 541  VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            V +A++DMY+KCG L+ AR +FD    ++++ W+ +I +YG+HG G++ ++L   MV  G
Sbjct: 956  VATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAG 1015

Query: 601  SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                 V+P+ VTF  + +ACSHSG++ EG   F  M +++ I     +YAC+VDLLGRAG
Sbjct: 1016 -----VRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAG 1070

Query: 661  KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            ++ +A  LI  MP E D A  W SLLGACRIH N+++ E  A +LF L+P  A ++VLLS
Sbjct: 1071 QLSEAVDLIENMPVEPD-ASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLS 1129

Query: 721  NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            NIY++   W++   VRK M   G  K  G S +E+ +++HKF  GD SH Q E+L+  LE
Sbjct: 1130 NIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLE 1189

Query: 781  NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
             L+  M+  GYVP T  VLH++ EE KE  L  HSE+LAIAFG++NT PGTT+R+ KNLR
Sbjct: 1190 ELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLR 1249

Query: 841  VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +C DCH A K ISKI +R I++RD+ RFH F++G CSCGDYW
Sbjct: 1250 ICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/710 (33%), Positives = 388/710 (54%), Gaps = 37/710 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H+ V K G  L     A  L ++Y KC S +    KVFD     +   WNS + + CR
Sbjct: 22  QLHSQVFKTGI-LHDTFFATKLNSLYAKCAS-LQAARKVFDETPHPNVHLWNSTLRSYCR 79

Query: 158 FGKWDLALEAFRMMLYSNVE-PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
             +W+  L  F +M+ +  E P +FT+     AC+ L     L LG+ +HG + +  E  
Sbjct: 80  EKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRM---LELGKVIHGFAKKNDEIG 136

Query: 217 T--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +  F+ +AL+ +Y+K G++ +A  +F+ F+  D V W ++V+   QN+   EA+    QM
Sbjct: 137 SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM 196

Query: 275 ALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            +   +  D V++ SV+ AC+ L  +  G  +H   +R +   D   V S L+++Y    
Sbjct: 197 VMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS-LLNLYAKTG 255

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
             +    +F  + +K +  W+ MI  Y  NE   EAL LF +M E     PN+ T+ S +
Sbjct: 256 CEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE-KRFEPNSVTVVSAL 314

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC  S    + + IH  A+  G   D  V  AL+DMY +    + +  +F  +  +D V
Sbjct: 315 QACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVV 374

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SW  +++GY    Q+G A   +   +NM           L + +   +P+++ ++ +L  
Sbjct: 375 SWVALLSGY---AQNGMAYKSMGVFRNM-----------LSDGI---QPDAVAVVKILAA 417

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L    +   +H Y +R+   ++V VG++L+++Y+KCG L  A ++F  M VR+V+ W
Sbjct: 418 SSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIW 477

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           + +I AYG+HG G E LE+   MV    +   V+PN VTF+++ +ACSH+G+V EG+ +F
Sbjct: 478 SSMIAAYGIHGRGGEALEIFDQMV----KNSTVRPNNVTFLSILSACSHAGLVEEGLKIF 533

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG--AWSSLLGACRI 691
            +M  DY + P  +H+  +VDLLGR G++  A  +IN MP     AG   W +LLGACRI
Sbjct: 534 DRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPI---PAGPHVWGALLGACRI 590

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H N+E+GE AA+NLF L+P  A +Y+LLSNIY+    WD   ++R ++KE G++K  G S
Sbjct: 591 HHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQS 650

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            +E    +H FLA D  H  S++++  L  L  +M KE Y+PD   +LH+
Sbjct: 651 MVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 265/531 (49%), Gaps = 34/531 (6%)

Query: 45  WIESLRSEARSNQFREAI-LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W  +LRS  R  Q+ E + L ++ +  +   PDNF  P  LKA AG++ L LGK IH   
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K     S + V + LV +Y KCG  M +  KVF+     D V W SM+    +    + 
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQ-MGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188

Query: 164 ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           AL  F +M++   V     TLVSV  AC+ L     ++ G  VHG  +R   + +  ++N
Sbjct: 189 ALALFSQMVMMDCVVLDPVTLVSVVSACAQLLN---VKAGSCVHGLVIRREFDGDLPLVN 245

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ +YAK G    A  LF    ++D++SW+T+++  + N+   EA+    +M  +  +P
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 305

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V++ S L AC+    L+ GK+IH  A+     +D S V +AL+DMY  C   +    +
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFS-VSTALIDMYMKCSCPDEAVDL 364

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  +  K +  W A+++GY QN    +++ +F  M    G+ P+A  +  ++ A      
Sbjct: 365 FQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS-DGIQPDAVAVVKILAASSELGI 423

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           F     +HG+ ++ G   + +V  +L+++YS+ G +  +  +F  M VRD V W++MI  
Sbjct: 424 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAA 483

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y I G+ G+AL +  +M               + TV   +PN++T +++L  C     + 
Sbjct: 484 YGIHGRGGEALEIFDQMVK-------------NSTV---RPNNVTFLSILSACSHAGLVE 527

Query: 522 KGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +G +I     H Y +R     D      +VD+  + G L  A  + + MP+
Sbjct: 528 EGLKIFDRMVHDYQLR----PDSEHFGIMVDLLGRIGQLGKAMDIINRMPI 574



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 143/276 (51%), Gaps = 6/276 (2%)

Query: 29   ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
            A S+        C   W   +R  A   +F  ++  Y +M    ++PD FAFP  LK+ A
Sbjct: 770  AASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCA 829

Query: 89   GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
            G+ DL  GK IH H+V  G   + + V   LV+MY KCG D+     VFD++  +D VSW
Sbjct: 830  GLSDLQRGKVIHQHLVCCGCS-NDLFVDAALVDMYAKCG-DIEAARLVFDKMAVRDLVSW 887

Query: 149  NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
             SMI+     G     L  F +M  S V P+  +++SV LAC NL     LR G   H  
Sbjct: 888  TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG---ALRKGEWFHSY 944

Query: 209  SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
             ++ G E++  +  A+M MY+K G +D A+ LF     +DLV W+ +++S   +    +A
Sbjct: 945  VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004

Query: 268  VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            +    QM   G++P  V+   VL ACSH  +L+ GK
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK 1040



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 176/373 (47%), Gaps = 10/373 (2%)

Query: 90   IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
            I   S  K+ HA +  YG    S  +    +        D   +  VF+ I       WN
Sbjct: 730  ISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASI--VFEDIPNPCSFLWN 787

Query: 150  SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
             MI      G++  +LE +  M+   ++P  F       +C+ LS    L+ G+ +H + 
Sbjct: 788  VMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLS---DLQRGKVIHQHL 844

Query: 210  LRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
            +  G  N  F+  AL+ MYAK G ++ A+ +F     RDLVSW +++S  + N    E +
Sbjct: 845  VCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETL 904

Query: 269  MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
             F   M   G+ P+ VSI SVL AC +L  L  G+  H+Y ++     D   V +A++DM
Sbjct: 905  GFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD-ILVATAIMDM 963

Query: 329  YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
            Y  C  ++  R +FD  + K +  W+AMI  YG + +  +A+ LF +M + AG+ P+  T
Sbjct: 964  YSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK-AGVRPSHVT 1022

Query: 389  MSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
             + V+ AC  S    + K        +  + R       ++D+  R G++  +  + ++M
Sbjct: 1023 FTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082

Query: 448  EVR-DTVSWNTMI 459
             V  D   W +++
Sbjct: 1083 PVEPDASIWGSLL 1095



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 141/277 (50%), Gaps = 12/277 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +    EA+  + EM     +P++    + L+A A  ++L  GK+IH   
Sbjct: 274 SWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIA 333

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+ L   +V+  L++MY KC     +   +F R+ +KD VSW ++++   + G    
Sbjct: 334 VWKGFEL-DFSVSTALIDMYMKCSCPD-EAVDLFQRLPKKDVVSWVALLSGYAQNGMAYK 391

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ++  FR ML   ++P +  +V +  A S L      +    +HG  +R G   N F+  +
Sbjct: 392 SMGVFRNMLSDGIQPDAVAVVKILAASSELGI---FQQALCLHGYVVRSGFNSNVFVGAS 448

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
           L+ +Y+K G + DA  LFK    RD+V W++++++   + +  EA+    QM     ++P
Sbjct: 449 LIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRP 508

Query: 282 DGVSIASVLPACSHLEMLDTGKEI-----HAYALRND 313
           + V+  S+L ACSH  +++ G +I     H Y LR D
Sbjct: 509 NNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           PG   +S  +  K+ HA      L  D  + +    MY     ++ A  VF+ +P     
Sbjct: 725 PGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSF 784

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            WNV+I  +   G     LEL   M+ +G     +KP++  F     +C+    +  G  
Sbjct: 785 LWNVMIRGFATDGRFLSSLELYSKMMEKG-----LKPDKFAFPFALKSCAGLSDLQRGKV 839

Query: 632 LFYKM-----KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +   +      +D  ++      A +VD+  + G +E A  + + M
Sbjct: 840 IHQHLVCCGCSNDLFVD------AALVDMYAKCGDIEAARLVFDKM 879


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/584 (40%), Positives = 349/584 (59%), Gaps = 29/584 (4%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H  ALR+ +   + +  SAL+ MY +C      RR FD I D    +  AM +GY +N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK---EGIHGHAIKLGLGRD 420
                +L LF  M  +A    +    ++ + A   S   PD+     +H    K+G  R+
Sbjct: 174 NLVYHSLELFRAM--IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 231

Query: 421 RYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
             V N ++D Y++ G   +E+++ +FD ME RD VSWN+MI  Y   G   +A+ L  +M
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKM 290

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
            N+                   K N++ L  VL  C    A+  GK IH   +R  L  +
Sbjct: 291 LNVGGGI---------------KCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEEN 335

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V VG+++VDMY+KCG +  A R F  +  +N+++W+ +I  YGMHG GQE LE+   M  
Sbjct: 336 VYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR 395

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     ++PN +TFI++ AACSH+G++ EG   +  MK ++GIE   +HY C+VDLLGR
Sbjct: 396 SG-----LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 450

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG +++AY LI  M  + D A  W +LL ACRIH+NVE+ E++ + LF L+   + +YVL
Sbjct: 451 AGCLDEAYSLIKEMKVKPD-AAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVL 509

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSNIY+ A++W     +R  +K   + K PG S  E   +I+ F  GD SH Q  +++ +
Sbjct: 510 LSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSY 569

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           LE L ERM++ GYVP+T  VLH+++EEEKE+ L  HSEKLA+AF ++N+ P + I + KN
Sbjct: 570 LEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKN 629

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC+DCH A KFI+KI  REII+RD++RFHHFK+G CSC DYW
Sbjct: 630 LRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 198/376 (52%), Gaps = 16/376 (4%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H   ++ G   S    A+ L++MY  C   M D  + FD I + + V   +M +   R
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPM-DARRAFDEIPDPNPVIVTAMASGYVR 172

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
                 +LE FR M+ S+   S     +  +A S  +R     +   +H    ++G E N
Sbjct: 173 NNLVYHSLELFRAMIASD-SASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 231

Query: 217 TFIMNALMAMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
             ++N ++  YAK G  D   A+ +F + E RD+VSWN++++  +QN    EA+    +M
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKM 290

Query: 275 --ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
                GIK + V++++VL AC+H   + TGK IH   +R   L +N +VG+++VDMY  C
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMG-LEENVYVGTSIVDMYSKC 349

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             VE   R F  I +K I  W+AMITGYG +   +EAL +F +M+  +GL PN  T  SV
Sbjct: 350 GRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR-SGLRPNYITFISV 408

Query: 393 VPACVRSEAFPDKEGIHGH-AIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEV 449
           + AC  S A    EG + + A+K   G +  V++   ++D+  R G ++ + ++  +M+V
Sbjct: 409 LAAC--SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKV 466

Query: 450 R-DTVSWNTMITGYTI 464
           + D   W  +++   I
Sbjct: 467 KPDAAIWGALLSACRI 482



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 129/232 (55%), Gaps = 9/232 (3%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVY 134
           D  A      A A + D  +   +HA + K G+   +  V NT+++ Y K GS D+    
Sbjct: 196 DEAAALVAFSASARVPDRGVTASLHALIAKIGFE-RNAGVVNTMLDSYAKGGSRDLEVAR 254

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY--SNVEPSSFTLVSVALACSN 192
           KVFD + E+D VSWNSMIA   + G    A+  +  ML     ++ ++  L +V LAC++
Sbjct: 255 KVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAH 313

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                 ++ G+++H   +R+G E N ++  +++ MY+K GRV+ A   F+  ++++++SW
Sbjct: 314 AG---AIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSW 370

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           + +++    + +  EA+    +M   G++P+ ++  SVL ACSH  +LD G+
Sbjct: 371 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGR 422


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/636 (37%), Positives = 371/636 (58%), Gaps = 33/636 (5%)

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WNT +  L++  +FL+A+    QM   G +P+  +    L +C+ L +   G + H    
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEE 368
           +   + +  FV + L+ MYC    V+  R+VF+  F S K    +NA+++GY  N    E
Sbjct: 77  KVGCVFE-PFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A++LF +M E  G+  N+ T+  ++PACV          +H   +K G   D  V N  +
Sbjct: 136 AVLLFRQMNE-EGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MY + G +  ++ +FD+M V+  +SWN M++GY    Q+G A  +L   +NM+     N
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGY---AQNGLATNVLELYRNMD----MN 247

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
            V+          P+ +TL+ VL  C  L A + G E+      +   ++  + +AL++M
Sbjct: 248 GVH----------PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINM 297

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YA+CG L  A+ VFD MP R +++W  II  YGMHG G+  ++L K M+  G     ++P
Sbjct: 298 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG-----IEP 352

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           +   F+ + +ACSH+G+  +G++ F  MK +Y +EP P+HY+C+VDLLGRAG++++A  L
Sbjct: 353 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL 412

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP + D A  W +LLGAC+IH+NVE+ E+A + +  LEP+   +YVLLSNIYS+A  
Sbjct: 413 IESMPIKPDGA-VWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 471

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
               + +R  MKE  ++K+PGCS++E    +H F+ GD +H QS++++  LE L   + +
Sbjct: 472 SKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQ 531

Query: 789 EGYVPDTSCVLHNVNEEEKE--TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           E   P+      N  E  K+  T +  HSEKLA+AFG+LNT  G  + + KNLR+C DCH
Sbjct: 532 EFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCH 587

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              K +SKI  R++ +RD  RFHHF+NG+CSC DYW
Sbjct: 588 LFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 20/429 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A+  QF +A+  Y +M R   +P+ F FP  LK+ A +    LG Q H  + 
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKWD 162
           K G       V   L++MY K GS + +  KVF+    + K  V +N++++      K  
Sbjct: 77  KVGCVFEPF-VQTGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+  FR M    V  +S TL+ +  AC +      L LG  +H ++L+ G + +  ++N
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVS---PINLELGSSLHCSTLKYGFDSDVSVVN 191

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
             + MY K G V+ A+ LF     + L+SWN +VS  +QN      +   R M + G+ P
Sbjct: 192 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V++  VL +C++L     G E+  + ++      N F+ +AL++MY  C  +   + V
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVE-FKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + ++ +  W A+I GYG + + E A+ LF +M   +G+ P+ T    V+ AC  S A
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR-SGIEPDGTAFVCVLSAC--SHA 367

Query: 402 FPDKEGIHGHAI-----KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
               +G+    +     +L  G + Y  + ++D+  R GR++ ++T+ + M ++ D   W
Sbjct: 368 GLTDQGLEYFKMMKRNYQLEPGPEHY--SCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425

Query: 456 NTMITGYTI 464
             ++    I
Sbjct: 426 GALLGACKI 434



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 9/291 (3%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T C  + +    S ++ +   EA+L + +M    +  ++     ++ A     +L LG  
Sbjct: 117 TVCYNALVSGYVSNSKCS---EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS 173

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H   +KYG+  S V+V N  + MY KCGS  +   K+FD +  K  +SWN+M++   + 
Sbjct: 174 LHCSTLKYGFD-SDVSVVNCFITMYMKCGSVNY-AQKLFDEMPVKGLISWNAMVSGYAQN 231

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G     LE +R M  + V P   TLV V  +C+NL  +    +G +V       G   N 
Sbjct: 232 GLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS---VGHEVEFKIQASGFTSNP 288

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NAL+ MYA+ G +  A+ +F    +R LVSW  I+     +     AV   ++M   
Sbjct: 289 FLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRS 348

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           GI+PDG +   VL ACSH  + D G E      RN  L       S +VD+
Sbjct: 349 GIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 399



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 8/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++      +  Y  M  + + PD      VL + A +   S+G ++   +
Sbjct: 220 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI 279

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G+  S+  + N L+NMY +CG ++     VFD + E+  VSW ++I      G  ++
Sbjct: 280 QASGF-TSNPFLNNALINMYARCG-NLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI 337

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGN-SLRVGEWNTFIMN 221
           A++ F+ M+ S +EP     V V  ACS+    D GL   + +  N  L  G  +   M 
Sbjct: 338 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMV 397

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
            L+    + GR+ +A+TL +S   + D   W  ++ +
Sbjct: 398 DLL---GRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/636 (38%), Positives = 376/636 (59%), Gaps = 33/636 (5%)

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F  F+D+DL+       S S     L A+  +++ +L    PD    + +L  C+ L  +
Sbjct: 52  FCVFQDKDLLR-----KSQSDGGTGLYALDLIQRGSL---VPDYNLYSKLLKECTRLGKV 103

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G+ +HA+ + +  L ++  + + +V+MY  C  ++  RR+FD +  K +  W A+I G
Sbjct: 104 EQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAG 163

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN    +AL+LF +M  + G  PN  T+SS++ A            +H   +K G   
Sbjct: 164 FSQNNRPRDALLLFPQMLRL-GFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQS 222

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
             YV +AL+DMY+R G ++ ++  FD M  +  VSWN +I+G+   G+   AL LL +MQ
Sbjct: 223 SVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQ 282

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                  R N           +P   T  +VL  C ++ AL +GK +HA+ I++ L    
Sbjct: 283 -------RKNF----------QPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            +G+ L+DMYAK G ++ A+RVFD +   +V++WN ++     HG G+E L+  + M+  
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI 385

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     ++PNE++F+ +  ACSHSG++ EG+  F  MK  Y +EP   HY   VDLLGR 
Sbjct: 386 G-----IEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRV 439

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G ++ A + I  MP E   A  W +LLGACR+H+N+E+G  AA+  F L+P  +   +LL
Sbjct: 440 GLLDRAERFIREMPIE-PTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY+SA  W     VRK MKE GV+K+P CSW+E  + +H F+A D +H + +++ G  
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKW 558

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           E +S ++++ GYVPDTS VL  V+++E+E  L  HSEKLA+AF +LNTP G+ IR+ KN+
Sbjct: 559 EEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNI 618

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           RVC DCH A KF+SK+  REII+RD  RFH F++G+
Sbjct: 619 RVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 232/510 (45%), Gaps = 48/510 (9%)

Query: 153 ATLCRFGKWDL----------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           A+ C F   DL           L A  ++   ++ P       +   C+ L +   +  G
Sbjct: 50  ASFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGK---VEQG 106

Query: 203 RQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           R VH + +     + +  + N ++ MYAK G +DDA+ +F     +D+V+W  +++  SQ
Sbjct: 107 RIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQ 166

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N++  +A++   QM   G +P+  +++S+L A      LD G ++HA+ L+      + +
Sbjct: 167 NNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ-SSVY 225

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VGSALVDMY  C  ++  +  FD +  K    WNA+I+G+ +    E AL L  KM+   
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQR-K 284

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
              P   T SSV+ AC    A    + +H H IK GL    ++ N L+DMY++ G I+ +
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           K +FD +   D VSWNTM+TG   C QHG    L +E  +  E+  R  +          
Sbjct: 345 KRVFDRLVKPDVVSWNTMLTG---CAQHG----LGKETLDRFEQMLRIGI---------- 387

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +PN I+ + VL  C     L +G        +  +  DV      VD+  + G L+ A R
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447

Query: 561 VFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNM---VAEGSRGGEVKPNEVTFIAL 616
               MP+      W  ++ A  MH          KNM   V    R  E+ P++     L
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMH----------KNMELGVYAAERAFELDPHDSGPRML 497

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            +    S      +    KM  + G++  P
Sbjct: 498 LSNIYASAGRWRDVAKVRKMMKESGVKKQP 527



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 203/396 (51%), Gaps = 12/396 (3%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           + R  + PD   +  +LK    +  +  G+ +HAH+V   +  + + + N +VNMY KCG
Sbjct: 78  IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
             + D  ++FD +  KD V+W ++IA   +  +   AL  F  ML    +P+ FTL S+ 
Sbjct: 138 C-LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            A  +     GL  G Q+H   L+ G + + ++ +AL+ MYA+ G +D A+  F     +
Sbjct: 197 KASGS---EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
             VSWN ++S  ++  +   A+  L +M  +  +P   + +SVL AC+ +  L+ GK +H
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVH 313

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A+ +++ + +  +F+G+ L+DMY     ++  +RVFD +    +  WN M+TG  Q+   
Sbjct: 314 AHMIKSGLKL-IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQ 424
           +E L  F +M  + G+ PN  +   V+ AC  S      EG++   +  K  +  D    
Sbjct: 373 KETLDRFEQMLRI-GIEPNEISFLCVLTACSHSGLL--DEGLYYFELMKKYKVEPDVPHY 429

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
              +D+  R+G ++ ++    +M +  T + W  ++
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 146/260 (56%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   +++N+ R+A+L + +M R   QP++F   ++LKA      L  G Q+HA  
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KYGY  SSV V + LV+MY +CG  M      FD +  K +VSWN++I+   R G+ + 
Sbjct: 216 LKYGYQ-SSVYVGSALVDMYARCGH-MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEH 273

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL     M   N +P+ FT  SV  AC+++     L  G+ VH + ++ G +   FI N 
Sbjct: 274 ALHLLWKMQRKNFQPTHFTYSSVLSACASIG---ALEQGKWVHAHMIKSGLKLIAFIGNT 330

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +DDAK +F      D+VSWNT+++  +Q+    E +    QM   GI+P+
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPN 390

Query: 283 GVSIASVLPACSHLEMLDTG 302
            +S   VL ACSH  +LD G
Sbjct: 391 EISFLCVLTACSHSGLLDEG 410



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 2/164 (1%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           A  L   G  T+ + SW   +   AR  +   A+    +M R + QP +F + +VL A A
Sbjct: 242 AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACA 301

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
            I  L  GK +HAH++K G  L +  + NTL++MY K GS + D  +VFDR+ + D VSW
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYAKAGS-IDDAKRVFDRLVKPDVVSW 359

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           N+M+    + G     L+ F  ML   +EP+  + + V  ACS+
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSH 403


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/683 (35%), Positives = 379/683 (55%), Gaps = 71/683 (10%)

Query: 204 QVHGNSLRVGEW-NTFIMNALMAMYAK--LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           Q+H   LR G + + ++  AL+  YA       D A  +F S  + ++  WN ++    +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N+K  +A+ F  +M +   +P+  +  ++  ACS  + +  G++IH + +++ I  D   
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD-VH 168

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EV 379
           + SA + MY +   +E  R++F +  +  +  WN MI GY +    E A  LF +M  + 
Sbjct: 169 IKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKN 227

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G W                                         N +++  ++ G +  
Sbjct: 228 IGSW-----------------------------------------NVMINGLAKGGNLGD 246

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +FD+M  RD +SW++M+ GY   G++ +AL + ++MQ  E                 
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE----------------- 289

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P    L +VL  C  + A+ +G+ +HAY  RN +  D V+G+AL+DMYAKCG L+   
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGW 349

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VF+ M  R + TWN +I    +HG  ++ LEL   +     + G +KPN +T + +  A
Sbjct: 350 EVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL-----QEGRMKPNGITLVGVLTA 404

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           C+H+G V +G+ +F  M++ YG++P  +HY C+VDLLGR+G   +A  LIN MP +   A
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK-PNA 463

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LLGACRIH N ++ E   + L  LEP  +  YVLLSNIY+    +D    +RK M
Sbjct: 464 AVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLM 523

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           K  G++  PG S ++    +H+F  GDGSH Q ++++  L+ + ER++  G+ PDTS VL
Sbjct: 524 KNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVL 583

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
            +++EEEKET +  HSEKLAIAFG++NT PG  I + KNLRVC+DCH ATK IS+I  RE
Sbjct: 584 FDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDRE 643

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           II+RD  R+HHFKNGTCSC D+W
Sbjct: 644 IIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 203/429 (47%), Gaps = 54/429 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++    +N+  +AI  Y  M   D +P+ F +P + KA +  Q +  G+QIH HVV
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+G G S V + +  + MY   G  + D  K+F    E D V WN+MI    + G  + A
Sbjct: 160 KHGIG-SDVHIKSAGIQMYASFGR-LEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAA 216

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
              F  M   N+                                    G WN  I N L 
Sbjct: 217 KGLFAQMPVKNI------------------------------------GSWNVMI-NGL- 238

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
              AK G + DA+ LF    +RD +SW+++V       ++ EA+   +QM     +P   
Sbjct: 239 ---AKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
            ++SVL ACS++  +D G+ +HAY  RN I +D + +G+AL+DMY  C  ++ G  VF+ 
Sbjct: 296 ILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD-AVLGTALLDMYAKCGRLDMGWEVFEE 354

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + +++I  WNAMI G   +   E+AL LF K++E   + PN  T+  V+ AC  +  F D
Sbjct: 355 MKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE-GRMKPNGITLVGVLTACAHA-GFVD 412

Query: 405 KEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           K       ++   G D  +++   ++D+  R G    ++ + + M ++   + W  ++  
Sbjct: 413 KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472

Query: 462 YTICGQHGD 470
              C  HG+
Sbjct: 473 ---CRIHGN 478



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 5/160 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +++EA+  + +M R + +P  F   +VL A + I  +  G+ +HA++
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYL 320

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +    L +V +   L++MY KCG  DM   ++VF+ + E++  +WN+MI  L   G+ +
Sbjct: 321 KRNSIKLDAV-LGTALLDMYAKCGRLDMG--WEVFEEMKEREIFTWNAMIGGLAIHGRAE 377

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRL 201
            ALE F  +    ++P+  TLV V  AC++    D GLR+
Sbjct: 378 DALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRI 417



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 30/244 (12%)

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK--CGCLNFARRVFDLMPVRNVITW 573
           ++++L    ++HA  +R+    D  V  AL+  YA       +FA +VF  +P  NV  W
Sbjct: 42  SITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N++I          E  +L K +   G    + +PN+ T+  LF ACS +  V EG  + 
Sbjct: 102 NIVIKGC------LENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIH 155

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA---CR 690
             +   +GI       +  + +    G++EDA ++      E D    W++++     C 
Sbjct: 156 GHVV-KHGIGSDVHIKSAGIQMYASFGRLEDARKM--FYSGESDVV-CWNTMIDGYLKCG 211

Query: 691 IHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           + +       AA+ LF   P  ++ S  V+++ +     L     D RK   EM  R E 
Sbjct: 212 VLE-------AAKGLFAQMPVKNIGSWNVMINGLAKGGNLG----DARKLFDEMSERDE- 259

Query: 749 GCSW 752
             SW
Sbjct: 260 -ISW 262


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/685 (38%), Positives = 379/685 (55%), Gaps = 62/685 (9%)

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L+  R VH   +     +N+ +   LM  YA L  V  A+ +F    +R+++  N ++ S
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
              N  + E +     M    +KPD  +   VL ACS    +  GK+IH  A +   L  
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVG-LSS 174

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             FVG+ LV MY  C  +   R V D +S + +  WN+++ GY QN+  ++AL +  +ME
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
            V  +  +A TM+S++PA   +      E +             YV+    DM+ +MG+ 
Sbjct: 235 SVK-ISHDAGTMASLLPAVSNTTT----ENVM------------YVK----DMFFKMGK- 272

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
                       +  VSWN MI  Y       +A+ L   M+    E             
Sbjct: 273 ------------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFE------------- 307

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P+++++ +VLP CG  SAL+ GK+IH Y  R  L  ++++ +AL+DMYAKCGCL+ 
Sbjct: 308 ----PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDR 363

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VF+ M  R+V++W  +I AYG  G G + + L   M   G     + P+ + F+   
Sbjct: 364 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSG-----LVPDSIAFVTTL 418

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           AACSH+G++ EG   F  M D Y I P  +H AC+VDLLGRAGKV++AY+ I  MP E +
Sbjct: 419 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPN 478

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
           +   W +LLGACR+H N +IG +AA  LF L P+ + +YVLLSNIY+ A  W++  ++R 
Sbjct: 479 ER-VWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 537

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK  G++K PG S +E    IH FL GD SH QS +++  L+ L ++M++ GYVPD+  
Sbjct: 538 IMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSES 597

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTP---PGTTIRVAKNLRVCNDCHQATKFISK 854
            LH+V EE+KET L  HSEKLAI F ++NT        IR+ KNLR+C DCH A K IS+
Sbjct: 598 ALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQ 657

Query: 855 IESREIILRDVRRFHHFKNGTCSCG 879
           I SREII+RD  RFH F+ G CSC 
Sbjct: 658 ITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 176/348 (50%), Gaps = 39/348 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +  +RE I  +  M    ++PD++ FP VLKA +   ++ +GK+IH    K G 
Sbjct: 113 IRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGL 172

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S++ V N LV+MYGKCG  + +   V D ++ +D VSWNS++A   +  ++D ALE  
Sbjct: 173 S-STLFVGNGLVSMYGKCGF-LSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVC 230

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M    +   + T+ S+  A SN +             N + V +           M+ 
Sbjct: 231 REMESVKISHDAGTMASLLPAVSNTTTE-----------NVMYVKD-----------MFF 268

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K+G+             + LVSWN ++    +N   +EAV     M   G +PD VSI S
Sbjct: 269 KMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITS 315

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPAC     L  GK+IH Y  R   LI N  + +AL+DMY  C  ++  R VF+ +  +
Sbjct: 316 VLPACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYAKCGCLDRARDVFENMKSR 374

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  W AMI+ YG +    +A+ LF KM++ +GL P++    + + AC
Sbjct: 375 DVVSWTAMISAYGFSGRGCDAVALFSKMQD-SGLVPDSIAFVTTLAAC 421



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 8/245 (3%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA L   EM+R D+   N       +       L + +++ +  + +  G    T+A+ L
Sbjct: 194 EARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAG----TMASLL 249

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
             +      ++  V  +F ++ +K  VSWN MI    +      A+E +  M     EP 
Sbjct: 250 PAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPD 309

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
           + ++ SV  AC + S    L LG+++HG   R     N  + NAL+ MYAK G +D A+ 
Sbjct: 310 AVSITSVLPACGDTS---ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARD 366

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F++ + RD+VSW  ++S+   + +  +AV    +M   G+ PD ++  + L ACSH  +
Sbjct: 367 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGL 426

Query: 299 LDTGK 303
           L+ G+
Sbjct: 427 LEEGR 431


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/680 (37%), Positives = 395/680 (58%), Gaps = 41/680 (6%)

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E N F  NAL+A YAK   +  A  LF      DLVS+NT++++ +     L A+    +
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 274 MALRGIKPDGVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYC 330
           M   G+  DG + + V+ AC +H+ ++   +++H+ A  +     +S+V   ++L+  Y 
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGF---DSYVSVKNSLLTYYS 184

Query: 331 NCREVECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
               +E    VF+ + +  +    WN+MI  YGQ++   +AL L+  M    G   +  T
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVH-RGFEIDMFT 243

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR-IEISKTIFDDM 447
           ++SV+      E        H  AIK G  ++R+V + L+DMY++ G  +  S+ +F+++
Sbjct: 244 LASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEI 303

Query: 448 EVRDTVSWNTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              D V WNTMI+GY+   +   +AL   R+MQ       R   +          P+  +
Sbjct: 304 CGSDLVVWNTMISGYSQNKELSVEALECFRQMQ-------RAGYW----------PDDCS 346

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFDLM 565
            +  +  C  LS+ ++GK+ HA A+++ + ++ + V +ALV MY+KCG L  AR++F  M
Sbjct: 347 FVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRM 406

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  N +T N II  Y  HG G E L L + M+A       + P  +T +++ +AC+H+G 
Sbjct: 407 PQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLA-----ASIAPTSITLVSILSACAHTGR 461

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG   F  MKD +GIEP  +HY+C++DLLGRAGK+ +A +LI+ MP     A AW++L
Sbjct: 462 VEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSA-AWAAL 520

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACR + N+E+ E AA     LEP  A  Y++L+++YS+A+ W++A  +RK M++ G+R
Sbjct: 521 LGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIR 580

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL---HNV 802
           K+PGCSWIE    +H F+A D SH + +++H +L+ +  +M++ GYVPD           
Sbjct: 581 KKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDET 640

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            E+EKE +L  HSEKLA+AFG+L T  G  + V KNLR+C DCH A KF+S I  R+I +
Sbjct: 641 GEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITV 700

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFH F++G CSCGDYW
Sbjct: 701 RDAYRFHCFEDGRCSCGDYW 720



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 280/609 (45%), Gaps = 76/609 (12%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG----------- 127
           +F  +LK+    +DL  GK +H   +K     SS  ++N  + +Y KC            
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLK-SLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68

Query: 128 -------------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
                              S +   + +FD+I + D VS+N++I      G    AL  F
Sbjct: 69  THEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLF 128

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAM 226
             M    +    FT   V  AC N      + L RQ+H  +   G ++++  + N+L+  
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCN-----HVGLIRQLHSLAFSSG-FDSYVSVKNSLLTY 182

Query: 227 YAKLGRVDDAKTLFKSF--EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
           Y+K G +++A+ +F     E RD VSWN+++ +  Q+ + L+A+   R M  RG + D  
Sbjct: 183 YSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMF 242

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE-VECGRRVFD 343
           ++ASVL   S +E L  G + HA A++      N  VGS L+DMY  C   +   R+VF+
Sbjct: 243 TLASVLTTFSCVEDLSGGLQFHAKAIKTG-FNKNRHVGSGLIDMYAKCGAGMSESRKVFE 301

Query: 344 FISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            I    + +WN MI+GY QN E   EAL  F +M+  AG WP+  +    + AC    + 
Sbjct: 302 EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQR-AGYWPDDCSFVCAISACSNLSSP 360

Query: 403 PDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
              +  H  A+K  +  ++  V NAL+ MYS+ G ++ ++ +F  M   +TV+ N++I G
Sbjct: 361 SQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG 420

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G   ++L L  +M              L  ++    P SITL+++L  C     + 
Sbjct: 421 YAQHGIGTESLNLFEQM--------------LAASI---APTSITLVSILSACAHTGRVE 463

Query: 522 KGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
           +GK+ +   ++++   +      S ++D+  + G L+ A R+ D MP       W  ++ 
Sbjct: 464 EGKK-YFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLG 522

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           A   +G   E+ E   N         +++P N V +I L +  S +    E   +  K+ 
Sbjct: 523 ACRKYG-NMELAEKAANQFL------QLEPTNAVPYIMLASMYSAARKWEEAARI-RKLM 574

Query: 638 DDYGIEPSP 646
            D GI   P
Sbjct: 575 RDRGIRKKP 583



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 15/351 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R + SW   + +  +  +  +A+  Y +M     + D F   +VL   + ++DLS 
Sbjct: 200 GEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSG 259

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G Q HA  +K G+   +  V + L++MY KCG+ M +  KVF+ I   D V WN+MI+  
Sbjct: 260 GLQFHAKAIKTGFN-KNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGY 318

Query: 156 CRFGKWDL-ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--V 212
            +  +  + ALE FR M  +   P   + V    ACSNLS       G+Q H  +++  +
Sbjct: 319 SQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQ---GKQFHALAMKSEI 375

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
                 + NAL+ MY+K G + DA+ LF+     + V+ N+I++  +Q+    E++    
Sbjct: 376 PSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFE 435

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI--LIDNSFVGSALVDMYC 330
           QM    I P  +++ S+L AC+H   ++ GK+   + +  DI  +   +   S ++D+  
Sbjct: 436 QMLAASIAPTSITLVSILSACAHTGRVEEGKKY--FNMMKDIFGIEPEAEHYSCMIDLLG 493

Query: 331 NCREVECGRRVFDFIS-DKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
              ++    R+ D +      A W A++     YG  E  E+A   F+++E
Sbjct: 494 RAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLE 544


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/629 (38%), Positives = 370/629 (58%), Gaps = 28/629 (4%)

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S L  N +  EA++   +MA+ G +       ++L AC     L  G+ +HA+ ++   
Sbjct: 27  ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L   +++ + L+  Y  C  +E  R+V D + +K +  W AMI+ Y Q  +  EAL +F 
Sbjct: 84  L-PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M    G  PN  T ++V+ +C+R+      + IHG  +K       +V ++L+DMY++ 
Sbjct: 143 EMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G+I+ ++ IF+ +  RD VS   +I GY   G   +AL +   + +              
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS-------------- 247

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           E +    PN +T  ++L     L+ L  GK+ H + +R  L    V+ ++L+DMY+KCG 
Sbjct: 248 EGM---SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L++ARR+FD MP R  I+WN +++ Y  HG G+EVLEL + M  E      VKP+ VT +
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK----RVKPDAVTLL 360

Query: 615 ALFAACSHSGMVSEGMDLFYKM-KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           A+ + CSH  M   G+++F  M   +YG +P  +HY C+VD+LGRAG++++A++ I  MP
Sbjct: 361 AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            +   AG   SLLGACR+H +V+IGE   + L  +EP+ A +YV+LSN+Y+SA  W    
Sbjct: 421 SK-PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVN 479

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           +VR  M +  V KEPG SWI+    +H F A D +H + E++   ++ +S +M++ GYVP
Sbjct: 480 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVP 539

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           D SCVL++V+EE+KE +L GHSEKLA+ FG++ T  G  IRV KNLR+C DCH   K  S
Sbjct: 540 DLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFS 599

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K+  RE+ LRD  RFH   +G CSCGDYW
Sbjct: 600 KVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 209/406 (51%), Gaps = 22/406 (5%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           + + +EA+L   EM     +     + A+L A    + L  G+++HAH++K  Y L +  
Sbjct: 33  NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY-LPATY 88

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +   L+  YGKC   + D  KV D + EK+ VSW +MI+   + G    AL  F  M+ S
Sbjct: 89  LRTRLLIFYGKCDC-LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN----TFIMNALMAMYAKL 230
           + +P+ FT  +V  +C    R  GL LG+Q+HG    + +WN     F+ ++L+ MYAK 
Sbjct: 148 DGKPNEFTFATVLTSCI---RASGLGLGKQIHG---LIVKWNYDSHIFVGSSLLDMYAKA 201

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G++ +A+ +F+   +RD+VS   I++  +Q     EA+    ++   G+ P+ V+ AS+L
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            A S L +LD GK+ H + LR ++    + + ++L+DMY  C  +   RR+FD + ++  
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPF-YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----VRSEAFPDKE 406
             WNAM+ GY ++    E L LF  M +   + P+A T+ +V+  C    +        +
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           G+         G + Y    ++DM  R GRI+ +      M  + T
Sbjct: 381 GMVAGEYGTKPGTEHY--GCIVDMLGRAGRIDEAFEFIKRMPSKPT 424



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 7/264 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++    EA+  + EM RSD +P+ F F  VL +      L LGKQIH  +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK+ Y  S + V ++L++MY K G  + +  ++F+ + E+D VS  ++IA   + G  + 
Sbjct: 180 VKWNYD-SHIFVGSSLLDMYAKAG-QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F  +    + P+  T  S+  A S L+  D    G+Q H + LR    +   + N+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH---GKQAHCHVLRRELPFYAVLQNS 294

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKP 281
           L+ MY+K G +  A+ LF +  +R  +SWN ++   S++    E +   R M   + +KP
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354

Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
           D V++ +VL  CSH  M DTG  I
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNI 378


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/753 (35%), Positives = 382/753 (50%), Gaps = 117/753 (15%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D   +FD + EKD VSWN+M++   R G  D A + F  M + N    +  L +      
Sbjct: 113 DARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAY----- 167

Query: 192 NLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                  +R GR      L     +W     N LM  Y K   + DA+ LF     RDL+
Sbjct: 168 -------VRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLI 220

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWNT++S  +Q+    +A     +  +R +                              
Sbjct: 221 SWNTMISGYAQDGDLSQARRLFEESPVRDV------------------------------ 250

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
                     F  +A+V  Y     ++  RRVFD +  K+   +N MI GY Q +  +  
Sbjct: 251 ----------FTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMG 300

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
             LF +M      +PN  +                                    N ++ 
Sbjct: 301 RELFEEMP-----FPNIGSW-----------------------------------NIMIS 320

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
            Y + G +  ++ +FD M  RD+VSW  +I GY   G + +A+ +L EM+   E  NR+ 
Sbjct: 321 GYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRS- 379

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                           T    L  C  ++AL  GK++H   +R       +VG+ALV MY
Sbjct: 380 ----------------TFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMY 423

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            KCGC++ A  VF  +  +++++WN ++  Y  HG G++ L + ++M+  G     VKP+
Sbjct: 424 CKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG-----VKPD 478

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           E+T + + +ACSH+G+   G + F+ M  DYGI P+  HYAC++DLLGRAG +E+A  LI
Sbjct: 479 EITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLI 538

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
             MP E D A  W +LLGA RIH N+E+GE AA+ +F +EP  +  YVLLSN+Y+++  W
Sbjct: 539 RNMPFEPD-AATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRW 597

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
                +R KM+++GV+K PG SW+E  ++IH F  GD  H +  +++ FLE L  +M+ E
Sbjct: 598 VDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHE 657

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           GYV  T  VLH+V EEEK+ +L  HSEKLA+AFGIL  P G  IRV KNLRVC DCH A 
Sbjct: 658 GYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAI 717

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K ISKI  R II+RD  R+HHF  G CSC DYW
Sbjct: 718 KHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 160/340 (47%), Gaps = 20/340 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +  +     EA   + EM     Q    ++  ++   A  + + +G+++   +
Sbjct: 252 TWTAMVYAYVQDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKRMDMGRELFEEM 307

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                   ++   N +++ Y + G D+     +FD + ++D VSW ++IA   + G ++ 
Sbjct: 308 P-----FPNIGSWNIMISGYCQNG-DLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEE 361

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+     M       +  T      AC++++    L LG+QVHG  +R G E    + NA
Sbjct: 362 AMNMLVEMKRDGESLNRSTFCCALSACADIA---ALELGKQVHGQVVRTGYEKGCLVGNA 418

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G +D+A  +F+  + +D+VSWNT+++  +++    +A+     M   G+KPD
Sbjct: 419 LVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPD 478

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCREVECGRR 340
            +++  VL ACSH  + D G E      ++  +  NS   + ++D+     C E E    
Sbjct: 479 EITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLE-EAQNL 537

Query: 341 VFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
           + +   +   A W A++     +G  E  E+A  +  KME
Sbjct: 538 IRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKME 577


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 279/760 (36%), Positives = 420/760 (55%), Gaps = 63/760 (8%)

Query: 144 DQVSWNSMIATLCRF--------GKWDLALEAFRMMLY--SNVEPSSFTLVSVALACSNL 193
           +Q+SW     TL RF         + DL+       LY  S + PS++      L  S  
Sbjct: 2   NQISW-----TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKC 56

Query: 194 SRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            R    R   Q       + + N F  NA++A YAK  R   A  LF    + DLVS+NT
Sbjct: 57  GRLAWARKAFQ------DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALR 311
           ++S+ +   +   A+     M   G+  DG ++++V+ AC      D G   ++H+ A+ 
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD----DVGLIGQLHSVAVS 166

Query: 312 NDILIDNSFVG--SALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEE 368
           +     +S+V   +AL+  Y    +++  +RVF  +   +  + WN+MI  YGQ++   +
Sbjct: 167 SGF---DSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           AL LF +M    GL  +  T++SV+ A    E        HG  IK G  ++ +V + L+
Sbjct: 224 ALGLFQEMVR-RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282

Query: 429 DMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICGQH-GDALMLLREMQNMEEEKN 486
           D+YS+ G  +   + +F+++   D V WNTM++GY+   +   DAL   R+MQ +     
Sbjct: 283 DLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY--- 339

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSAL 545
                         +PN  + + V+  C  LS+ ++GK+IH+ A+++ + ++ + V +AL
Sbjct: 340 --------------RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNAL 385

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + MY+KCG L  ARR+FD M   N ++ N +I  Y  HG   E L L + M+       +
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER-----Q 440

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + P  +TFI++ +AC+H+G V EG + F  MK+ + IEP  +HY+C++DLLGRAGK+ +A
Sbjct: 441 IAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             LI  MP      G W+SLLGACR H N+E+   AA  +  LEP  A+ YV+LSN+Y+S
Sbjct: 501 ENLIARMPFNPGSIG-WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYAS 559

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
           A  W++   VRK M++ GV+K+PGCSWIE    IH F+A D SH   ++++ FLE +S +
Sbjct: 560 AGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGK 619

Query: 786 MRKEGYVPDTSCVL---HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           M++ GYVPD    L         EKE  L  HSEKLA+AFG+++T  G  + V KNLR+C
Sbjct: 620 MKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRIC 679

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A KFIS I  REI +RD  RFH FK G CSCGDYW
Sbjct: 680 GDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 172/588 (29%), Positives = 272/588 (46%), Gaps = 93/588 (15%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD------- 132
           F  +LK     +DLS GK +H+  +K  +   S   +N  + +Y KCG   W        
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIK-SFIPPSTYFSNHFILLYSKCGRLAWARKAFQDI 69

Query: 133 -----------------------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                                   +++FD+I E D VS+N++I+     G+   AL  F 
Sbjct: 70  SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMY 227
            M    ++   FTL +V  AC      D + L  Q+H  ++  G +++++   NAL+  Y
Sbjct: 130 GMREMGLDMDGFTLSAVITACC-----DDVGLIGQLHSVAVSSG-FDSYVSVNNALLTYY 183

Query: 228 AKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
            K G +DDAK +F      RD VSWN+++ +  Q+ +  +A+   ++M  RG+  D  ++
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDF 344
           ASVL A + LE L  G + H   ++      NS VGS L+D+Y  C     +C R+VF+ 
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDC-RKVFEE 301

Query: 345 ISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           I++  + LWN M++GY QN E+ E+AL  F +M+ + G  PN  +   V+ AC    +  
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI-GYRPNDCSFVCVISACSNLSSPS 360

Query: 404 DKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
             + IH  A+K  +  +R  V NAL+ MYS+ G ++ ++ +FD M   +TVS N+MI GY
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               QHG  +  L   Q M E +                P SIT ++VL  C     + +
Sbjct: 421 A---QHGIEMESLHLFQWMLERQ--------------IAPTSITFISVLSACAHTGRVEE 463

Query: 523 GKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
           G     +   NM+     +       S ++D+  + G L+ A  +   MP     I W  
Sbjct: 464 G-----WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 576 IIMAYGMHGE-------GQEVLEL----------LKNMVAEGSRGGEV 606
           ++ A   HG          +VL+L          L NM A   R  EV
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEV 566



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 7/266 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + SW   + +  +  +  +A+  + EM R  +  D F   +VL A   ++DLS G Q 
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  ++K G+  +S  V + L+++Y KCG  M D  KVF+ ITE D V WN+M++   +  
Sbjct: 263 HGQLIKTGFHQNS-HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNE 321

Query: 160 KW-DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWN 216
           ++ + ALE FR M      P+  + V V  ACSNLS       G+Q+H  +L+  +    
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS---QGKQIHSLALKSDIPSNR 378

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + NAL+AMY+K G + DA+ LF    + + VS N++++  +Q+   +E++   + M  
Sbjct: 379 ISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
           R I P  ++  SVL AC+H   ++ G
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEG 464


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/778 (35%), Positives = 428/778 (55%), Gaps = 42/778 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  Y  M    +  D ++FP +LKA   ++D+  G ++H  +VK G+  S+  + N LV
Sbjct: 146 ALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFN-STGFIVNALV 204

Query: 121 NMYGKCGSDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +MY K    +    ++FD   EK D V WNS++++    GK    L+ FR M  +    +
Sbjct: 205 SMYAKT-DHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASN 263

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKT 238
           S+T+VS   AC   S     +LG+++H   L+    +  ++ NAL+AMYA+ G++ +A  
Sbjct: 264 SYTIVSALTACEGFSYA---KLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGR 320

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           + +   + D+V+WN+++    QN  + EA+ F   M   G KPD VS+ SV+ A   L  
Sbjct: 321 ILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSN 380

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  G E+HAY +++     N  VG+ L+DMY  C       R F  + +K +  W  +I 
Sbjct: 381 LLAGMELHAYVIKHG-WDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA 439

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY  N+   EAL LF  + +   +  +   + S++ AC   ++    + IH H ++ GL 
Sbjct: 440 GYALNDCHVEALQLFRDVAK-KRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL- 497

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            D  +QN L+D+Y +   +  +  +F+ ++ +D VSW +MI+   + G   +A+ L R M
Sbjct: 498 IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRM 557

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                           ET L    +S+ L+ +L    +LSAL KG+EIH Y +R     +
Sbjct: 558 A---------------ETGLLA--DSVALLCILSAAASLSALKKGREIHGYLLRKGFCLE 600

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             +  A+VDMYA CG L  A+ VFD +  + ++ +  +I AYGMHG G+  +EL   M  
Sbjct: 601 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKM-- 658

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
              R   V P+ ++F+AL  ACSH+G++ EG      M+ +Y +EP P+HY C+VD+LGR
Sbjct: 659 ---RHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGR 715

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           A  V +A++ + MM  E      W +LL ACR H   EIGEIAAQ L  LEP    + VL
Sbjct: 716 ANCVVEAFEFVKMMKTE-PTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 774

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           +SN+++    W+    VR KMK  G+ K PGCSWIE   ++HKF A D SH ++++++  
Sbjct: 775 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEK 834

Query: 779 LENLSERMRKE-GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF--------GILNT 827
           L  ++ ++ +E GY+ DT  +LHNV+E EK  +L GHSE+LAIA+        GI NT
Sbjct: 835 LSEVTRKLERESGYLADTKFILHNVDEGEKVQMLHGHSERLAIAYEGKERDSKGIQNT 892



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 265/529 (50%), Gaps = 36/529 (6%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           KVFD + ++   +WN++I      G+   AL  +R M    V    ++   +  AC  L 
Sbjct: 117 KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKL- 175

Query: 195 RRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWN 252
            RD +R G ++H   +++G  +T FI+NAL++MYAK   +  AK LF + +++ D V WN
Sbjct: 176 -RD-IRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWN 233

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +I+SS S + K LE +   R+M + G   +  +I S L AC        GKEIHA  L++
Sbjct: 234 SILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKS 293

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
               +  +V +AL+ MY  C ++    R+   +++  +  WN++I GY QN   +EAL  
Sbjct: 294 THSFE-VYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQF 352

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F  M   AG  P+  +++SV+ A  R         +H + IK G   +  V N L+DMYS
Sbjct: 353 FCDM-IAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYS 411

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           +          F  M  +D +SW T+I GY +   H +AL L R++     E        
Sbjct: 412 KCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRME-------- 463

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
           +DE +L          ++L  C  L ++   KEIH + +R  L  D V+ + LVD+Y KC
Sbjct: 464 IDEMMLG---------SILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKC 513

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
             + +A RVF+ +  ++V++W  +I +  ++G   E +EL + M   G     +  + V 
Sbjct: 514 RNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETG-----LLADSVA 568

Query: 613 FIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS-----PDHYACVVDL 655
            + + +A +    + +G ++  Y ++  + +E S      D YAC  DL
Sbjct: 569 LLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDL 617


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 353/581 (60%), Gaps = 25/581 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCR-EVECGRRVFDFISDKKIALWNAMITGYG 361
           K+IHA+++R+ + ++N  +G  L+    +    +     VF  I +  +  WN +I GY 
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +++    A + + +M  V+ + P+  T   ++ A  +S    + E IH   I+ G     
Sbjct: 95  ESDNPSPAFLFYRQMV-VSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLV 153

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +VQN+L+ +Y+  G  E +  +F+ M+ RD V+WN+MI G+ + G+  +AL L REM   
Sbjct: 154 FVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREM--- 210

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                         +V   +P+  T++++L     L AL  G+ +H Y ++  L+ +  V
Sbjct: 211 --------------SVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++L+D+YAKCG +  A+RVF  M  RN ++W  +I+   ++G G+E LEL K M  +G 
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG- 315

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               + P+E+TF+ +  ACSH GM+ EG + F +MK++ GI P  +HY C+VDLL RAG 
Sbjct: 316 ----LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGL 371

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           V+ AY+ I  MP +   A  W +LLGAC IH ++ +GEIA  +L  LEP  +  YVLLSN
Sbjct: 372 VKQAYEYIQNMPVQ-PNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSN 430

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           +Y+S + W     +R+ M + GV+K PG S +E G+ +++F  GD SH QS+ ++  LE 
Sbjct: 431 LYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEK 490

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           ++E ++ EGYVP T+ VL ++ EEEKE  L  HSEK+AIAF +LNTPPGT IRV KNLRV
Sbjct: 491 ITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRV 550

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH A K I+KI  REI++RD  RFHHF+ G+CSC DYW
Sbjct: 551 CADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 204/398 (51%), Gaps = 10/398 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIHA  +++G  L++  +   L+       + M   Y VF  I   +  +WN++I    
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  A   +R M+ S VEP + T   +  A   +S+   +R G  +H  ++R G E 
Sbjct: 95  ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA---ISKSLNVREGEAIHSVTIRNGFES 151

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+ N+L+ +YA  G  + A  +F+  ++RDLV+WN++++  + N +  EA+   R+M+
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
           + G++PDG ++ S+L A + L  L+ G+ +H Y L+   L  NS V ++L+D+Y  C  +
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG-LSKNSHVTNSLLDLYAKCGAI 270

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              +RVF  +S++    W ++I G   N + EEAL LF +ME   GL P+  T   V+ A
Sbjct: 271 REAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEG-QGLVPSEITFVGVLYA 329

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DT 452
           C       D+   +   +K   G    +++   ++D+ SR G ++ +     +M V+ + 
Sbjct: 330 CSHC-GMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 388

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           V W T++   TI G  G   +    + N+E + + + V
Sbjct: 389 VIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYV 426



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 149/262 (56%), Gaps = 6/262 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R  A S+    A L Y +M  S ++PD   +P +LKA++   ++  G+ IH+  
Sbjct: 85  TWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVT 144

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  S V V N+L+++Y  CG D    YKVF+ + E+D V+WNSMI      G+ + 
Sbjct: 145 IRNGFE-SLVFVQNSLLHIYAACG-DTESAYKVFELMKERDLVAWNSMINGFALNGRPNE 202

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  FR M    VEP  FT+VS+  A + L     L LGR+VH   L+VG   N+ + N+
Sbjct: 203 ALTLFREMSVEGVEPDGFTVVSLLSASAELG---ALELGRRVHVYLLKVGLSKNSHVTNS 259

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G + +A+ +F    +R+ VSW +++  L+ N    EA+   ++M  +G+ P 
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPS 319

Query: 283 GVSIASVLPACSHLEMLDTGKE 304
            ++   VL ACSH  MLD G E
Sbjct: 320 EITFVGVLYACSHCGMLDEGFE 341


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/758 (34%), Positives = 412/758 (54%), Gaps = 32/758 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + S  R+    +A+  Y +M    + PD   FP ++KA   +++      +   V 
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             G   +   VA++L+  Y + G    DV  K+FDR+ +KD V WN M+    + G  D 
Sbjct: 166 SLGMDCNEF-VASSLIKAYLEYGK--IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            ++ F +M    + P++ T   V   C++    D   LG Q+HG  +  G ++   I N+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID---LGVQLHGLVVVSGVDFEGSIKNS 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY+K GR DDA  LF+     D V+WN ++S   Q+    E++ F  +M   G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++ +S+LP+ S  E L+  K+IH Y +R+ I +D  F+ SAL+D Y  CR V   + +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD-IFLTSALIDAYFKCRGVSMAQNIF 398

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              +   + ++ AMI+GY  N    ++L +F  + +V  + PN  T+ S++P      A 
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLAL 457

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +HG  IK G      +  A++DMY++ GR+ ++  IF+ +  RD VSWN+MIT  
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
                   A+ + R+M            YD            +++   L  C  L + + 
Sbjct: 518 AQSDNPSAAIDIFRQM------GVSGICYD-----------CVSISAALSACANLPSESF 560

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK IH + I++ LA+DV   S L+DMYAKCG L  A  VF  M  +N+++WN II A G 
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG+ ++ L L   MV +      ++P+++TF+ + ++C H G V EG+  F  M +DYGI
Sbjct: 621 HGKLKDSLCLFHEMVEKSG----IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HYACVVDL GRAG++ +AY+ +  MP   D AG W +LLGACR+H+NVE+ E+A+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD-AGVWGTLLGACRLHKNVELAEVAS 735

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
             L  L+P  + +YVL+SN +++A+ W+    VR  MKE  V+K PG SWIE     H F
Sbjct: 736 SKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLF 795

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           ++GD +H +S  ++  L +L   +R EGY+P     LH
Sbjct: 796 VSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 15/422 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +S    E++  + EM  S + PD   F ++L +V+  ++L   KQIH ++
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366

Query: 104 VKYGYGLSSVTVANTLVNMYGKC-GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +++   L  + + + L++ Y KC G  M     +F +    D V + +MI+     G + 
Sbjct: 367 MRHSISL-DIFLTSALIDAYFKCRGVSM--AQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMN 221
            +LE FR ++   + P+  TLVS+      L     L+LGR++HG  ++ G  N   I  
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILL---ALKLGRELHGFIIKKGFDNRCNIGC 480

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A++ MYAK GR++ A  +F+    RD+VSWN++++  +Q+D    A+   RQM + GI  
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D VSI++ L AC++L     GK IH + +++  L  + +  S L+DMY  C  ++    V
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHS-LASDVYSESTLIDMYAKCGNLKAAMNV 599

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  + +K I  WN++I   G +   +++L LF +M E +G+ P+  T   ++ +C     
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659

Query: 402 FPDKEGI---HGHAIKLGLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNT 457
               EG+          G+   +     ++D++ R GR+ E  +T+       D   W T
Sbjct: 660 V--DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717

Query: 458 MI 459
           ++
Sbjct: 718 LL 719



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 26/335 (7%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDF-IS 346
           +L ACS+  +L  GK++HA+ + N I  D S+    ++ MY  C    +CG+  +   + 
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGD-SYTDERILGMYAMCGSFSDCGKMFYRLDLR 99

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
              I  WN++I+ + +N    +AL  + KM    G+ P+ +T   +V ACV  + F   +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKM-LCFGVSPDVSTFPCLVKACVALKNFKGID 158

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +      LG+  + +V ++L+  Y   G+I++   +FD +  +D V WN M+ GY  CG
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
                +     M+             +D+      PN++T   VL  C +   +  G ++
Sbjct: 219 ALDSVIKGFSVMR-------------MDQI----SPNAVTFDCVLSVCASKLLIDLGVQL 261

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H   + + +  +  + ++L+ MY+KCG  + A ++F +M   + +TWN +I  Y   G  
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           +E L     M++ G     V P+ +TF +L  + S
Sbjct: 322 EESLTFFYEMISSG-----VLPDAITFSSLLPSVS 351



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 13/136 (9%)

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
           RN+   L+ET+    P  ++L+  L  C   + L +GK++HA+ I N ++ D      ++
Sbjct: 24  RNSSRFLEETI----PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERIL 77

Query: 547 DMYAKCGCLNFARRVFDLMPVR--NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
            MYA CG  +   ++F  + +R  ++  WN II ++  +G   + L     M+  G    
Sbjct: 78  GMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG---- 133

Query: 605 EVKPNEVTFIALFAAC 620
            V P+  TF  L  AC
Sbjct: 134 -VSPDVSTFPCLVKAC 148


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/701 (36%), Positives = 387/701 (55%), Gaps = 66/701 (9%)

Query: 200 RLGRQVHGNSLRVGEWN-TFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
           R   Q+H  S++    N   + + L+A+YA  ++  +  A +LF   ++  LVSWN ++ 
Sbjct: 29  REANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIK 88

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
              +N +  +A+    ++ L    PD  ++  VL  C+ L  L  GK+IH   L+    +
Sbjct: 89  CYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGV 147

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D  FV S+LV MY  C E+E  R+VFD + DK +  WN++I GY +    E AL +F +M
Sbjct: 148 DK-FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM 206

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            E                                        +D +    L+D  S+ G+
Sbjct: 207 PE----------------------------------------KDSFSWTILIDGLSKSGK 226

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM------------QNMEEE 484
           +E ++ +FD M +R++VSWN MI GY   G    A  L  +M               E  
Sbjct: 227 LEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERN 286

Query: 485 KNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
           K       L E +LR    PN  T++  +     + +L  G+ +H+Y +++   TD V+G
Sbjct: 287 KQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLG 346

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           + L++MY+KCG +  A RVF  +P + +  W  +I+  GMHG  ++ LEL   M   G  
Sbjct: 347 TLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTG-- 404

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              +KP+ +TFI +  ACSH+G   +    F  M  DYGI+PS +HY C++D+L RAG +
Sbjct: 405 ---LKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHL 461

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           E+A   I  MP + +K   W+SLL   R H N+ +GE AAQ+L  L PD    YV+LSN+
Sbjct: 462 EEAKDTIERMPIKANKV-IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNM 520

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y++A LW+K   VR+ MK+ G++K+PGCS IE    IH+F+ GD SH Q+E+++  L  +
Sbjct: 521 YAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEM 580

Query: 783 SERMRKEGYVPDTSCVLHNVNEE-EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
            +++   G++PDT+ VL  + E+ EKE  L  HSE+LAIAFG+LN   G+ IR+ KNLR+
Sbjct: 581 KKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRI 640

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CNDCH  TK +S I +REII+RD  RFHHFK+G+CSC D+W
Sbjct: 641 CNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/427 (32%), Positives = 214/427 (50%), Gaps = 33/427 (7%)

Query: 62  ILSYIEMTRS------------DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           I  YIE  RS            D  PD+F  P VLK  A +  L  GKQIH  V+K G+G
Sbjct: 87  IKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +    V ++LV+MY KCG ++    KVFDR+ +KD VSWNS+I    R G+ +LALE F 
Sbjct: 147 VDKF-VLSSLVSMYSKCG-EIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFE 204

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
            M     E  SF   S  +    LS+   L   R V     R+   N+   NA++  Y K
Sbjct: 205 EM----PEKDSF---SWTILIDGLSKSGKLEAARDVFD---RMPIRNSVSWNAMINGYMK 254

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G  + AK LF    +R LV+WN++++   +N +F +A+     M    I P+  +I   
Sbjct: 255 AGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGA 314

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           + A S +  L TG+ +H+Y +++    D   +G+ L++MY  C  V+   RVF  I  KK
Sbjct: 315 VSAASGMVSLGTGRWVHSYIVKSGFKTDG-VLGTLLIEMYSKCGSVKSALRVFRSIPKKK 373

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W ++I G G +   E+ L LF +M    GL P+A T   V+ AC  +  F +    +
Sbjct: 374 LGHWTSVIVGLGMHGLVEQTLELFDEMCR-TGLKPHAITFIGVLNACSHA-GFAEDAHRY 431

Query: 410 GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICG 466
              +    G    +++   L+D+  R G +E +K   + M ++ + V W ++++G     
Sbjct: 432 FKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSR--- 488

Query: 467 QHGDALM 473
           +HG+  M
Sbjct: 489 KHGNIRM 495



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 208/422 (49%), Gaps = 49/422 (11%)

Query: 285 SIASVLPACSHLEMLDTGKE-----IHAYALRNDILIDNSFVGSALVDMYCNCR--EVEC 337
           S+   LP   H  + + G E     +HA +++   L ++  V S L+ +Y + R   ++ 
Sbjct: 9   SLQPFLPPNLHFPLQNCGTEREANQLHALSIKTASL-NHPSVSSRLLALYADPRINNLQY 67

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              +FD+I +  +  WN +I  Y +N+   +A+ LF K+  +    P++ T+  V+  C 
Sbjct: 68  AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKL--LCDFVPDSFTLPCVLKGCA 125

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           R  A  + + IHG  +K+G G D++V ++L+ MYS+ G IE+ + +FD ME +D VSWN+
Sbjct: 126 RLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNS 185

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I GY  CG+   AL +  EM                     P+ +S +   ++ G    
Sbjct: 186 LIDGYARCGEIELALEMFEEM---------------------PEKDSFSWTILIDGLSKS 224

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
             L   +++       M   + V  +A+++ Y K G  N A+ +FD MP R+++TWN +I
Sbjct: 225 GKLEAARDV----FDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMI 280

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF---Y 634
             Y  + +  + L+L + M+ E     ++ PN  T +   +A   SGMVS G   +   Y
Sbjct: 281 TGYERNKQFTKALKLFEVMLRE-----DISPNYTTILGAVSAA--SGMVSLGTGRWVHSY 333

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            +K   G +        ++++  + G V+ A ++   +P +  K G W+S++    +H  
Sbjct: 334 IVKS--GFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKK--KLGHWTSVIVGLGMHGL 389

Query: 695 VE 696
           VE
Sbjct: 390 VE 391



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 246/521 (47%), Gaps = 55/521 (10%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SDMWDV 133
           P N  FP  L+     ++     Q+HA  +K    L+  +V++ L+ +Y     +++   
Sbjct: 15  PPNLHFP--LQNCGTERE---ANQLHALSIKTA-SLNHPSVSSRLLALYADPRINNLQYA 68

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           + +FD I E   VSWN +I       + + A+  F  +L   V P SFTL  V   C+ L
Sbjct: 69  HSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARL 127

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                L+ G+Q+HG  L++G   + F++++L++MY+K G ++  + +F   ED+D+VSWN
Sbjct: 128 G---ALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWN 184

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++   ++  +   A+    +M     + D  S   ++   S    L+  +++      +
Sbjct: 185 SLIDGYARCGEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVF-----D 235

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            + I NS   +A+++ Y    +    + +FD + ++ +  WN+MITGY +N+   +AL L
Sbjct: 236 RMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKL 295

Query: 373 FIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           F  M  E+++   PN TT+   V A     +      +H + +K G   D  +   L++M
Sbjct: 296 FEVMLREDIS---PNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEM 352

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           YS+ G ++ +  +F  +  +    W ++I G    G HG    L+ +   + +E  R  +
Sbjct: 353 YSKCGSVKSALRVFRSIPKKKLGHWTSVIVGL---GMHG----LVEQTLELFDEMCRTGL 405

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA------ 544
                     KP++IT + VL  C   S     ++ H Y    M+  D  +  +      
Sbjct: 406 ----------KPHAITFIGVLNAC---SHAGFAEDAHRYF--KMMTYDYGIKPSIEHYGC 450

Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
           L+D+  + G L  A+   + MP++ N + W  ++     HG
Sbjct: 451 LIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/744 (34%), Positives = 414/744 (55%), Gaps = 33/744 (4%)

Query: 60  EAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA++ ++++ R S   P+ F   +V++A   +  +  G Q+H  VV+ G+    V V  +
Sbjct: 19  EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFD-QDVYVGTS 77

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++ Y K G B+     VFD++ EK  V+W ++IA   + G+  ++LE F  M  +NV P
Sbjct: 78  LIDFYSKNG-BIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP 136

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             + + SV  ACS L   +G   G+Q+H   LR G E +  ++N L+  Y K  RV   +
Sbjct: 137 DRYVVSSVLSACSMLEFLEG---GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            LF     ++++SW T++S   QN    EA+    +M   G KPDG +  SVL +C  LE
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            L+ G+++HAY ++ + L  N FV + L+DMY     +   ++VFD ++++ +  +NAMI
Sbjct: 254 ALEQGRQVHAYTIKAN-LESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            GY   E   EAL LF +M  V    P+  T  S++       A    + IHG  IK G+
Sbjct: 313 EGYSSQEKLSEALELFHEMR-VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV 371

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D +  +AL+D+YS+   ++ ++ +F++M  +D V WN M  GYT   ++ +AL L   
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYST 431

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           +Q                   R KPN  T   ++     L++L  G++ H   ++  L  
Sbjct: 432 LQ-----------------FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDF 474

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
              V +ALVDMYAKCG +  AR++F+    R+V+ WN +I  +  HGE +E L + + M+
Sbjct: 475 CPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMM 534

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            EG     ++PN VTF+A+ +ACSH+G V +G++ F  M   +GI+P  +HYACVV LLG
Sbjct: 535 KEG-----IQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLG 588

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           R+GK+ +A + I  MP E   A  W SLL ACRI  NVE+G+ AA+     +P  +  Y+
Sbjct: 589 RSGKLFEAKEFIEKMPIE-PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYI 647

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LLSNI++S  +W     VR +M    V KEPG SWIE  ++++ F+A   +H++++ +  
Sbjct: 648 LLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGS 707

Query: 778 FLENLSERMRKEGYVPDTSCVLHN 801
            L+ L + ++  GYVPD + +L N
Sbjct: 708 VLDILIQHIKGAGYVPDATALLMN 731



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 216/429 (50%), Gaps = 17/429 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +++   EA+  + EM R   +PD FA  +VL +   ++ L  G+Q+HA+ 
Sbjct: 206 SWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYT 265

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     S+  V N L++MY K  + + D  KVFD + E++ +S+N+MI       K   
Sbjct: 266 IKANLE-SNEFVKNGLIDMYAK-SNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 323

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F  M      PS  T VS+    ++L     L L +Q+HG  ++ G   + F  +A
Sbjct: 324 ALELFHEMRVRLFPPSLLTFVSLLGVSASLF---ALELSKQIHGLIIKXGVSLDLFAGSA 380

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y+K   V DA+ +F+   ++D+V WN +    +Q+ +  EA+     +     KP+
Sbjct: 381 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPN 440

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + A+++ A S+L  L  G++ H   ++  +     FV +ALVDMY  C  +E  R++F
Sbjct: 441 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDF-CPFVTNALVDMYAKCGSIEEARKMF 499

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +    + +  WN+MI+ + Q+   EEAL +F +M +  G+ PN  T  +V+ AC  +   
Sbjct: 500 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK-EGIQPNYVTFVAVLSACSHAGXV 558

Query: 403 PDK----EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD-TVSWNT 457
            D       + G  IK   G + Y    ++ +  R G++  +K   + M +    + W +
Sbjct: 559 EDGLNHFNSMPGFGIK--PGTEHYA--CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614

Query: 458 MITGYTICG 466
           +++   I G
Sbjct: 615 LLSACRIAG 623



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 25/312 (8%)

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
           Y EEALM+F+ ++  +G  PN   ++SV+ AC +         +HG  ++ G  +D YV 
Sbjct: 16  YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 75

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            +L+D YS+ G IE+++ +FD +  +  V+W T+I GYT CG+   +L L  +M+     
Sbjct: 76  TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR----- 130

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
               NV           P+   + +VL  C  L  L  GK+IHAY +R     DV V + 
Sbjct: 131 --ETNVV----------PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV 178

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+D Y KC  +   R++FD M V+N+I+W  +I  Y  +    E ++L   M   G    
Sbjct: 179 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW--- 235

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             KP+     ++  +C     + +G  +  Y +K +  +E +      ++D+  ++  + 
Sbjct: 236 --KPDGFACTSVLTSCGSLEALEQGRQVHAYTIKAN--LESNEFVKNGLIDMYAKSNLLX 291

Query: 664 DAYQLINMMPPE 675
           DA ++ ++M  +
Sbjct: 292 DAKKVFDVMAEQ 303


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/636 (37%), Positives = 371/636 (58%), Gaps = 33/636 (5%)

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WNT +  L++  +FL+A+    QM   G +P+  +    L +C+ L +   G + H    
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEE 368
           +   + +  FV + L+ MYC    V+  R+VF+  F S K    +NA+++GY  N    +
Sbjct: 68  KVGCVFE-PFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A++LF +M E  G+  N+ T+  ++PACV          +H   +K G   D  V N  +
Sbjct: 127 AVLLFRQMNE-EGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MY + G +  ++ +FD+M V+  +SWN M++GY    Q+G A  +L   +NM+     N
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGY---AQNGLATNVLELYRNMD----MN 238

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
            V+          P+ +TL+ VL  C  L A + G E+      +   ++  + +AL++M
Sbjct: 239 GVH----------PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINM 288

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YA+CG L  A+ VFD MP R +++W  II  YGMHG G+  ++L K M+  G     ++P
Sbjct: 289 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG-----IEP 343

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           +   F+ + +ACSH+G+  +G++ F  MK +Y +EP P+HY+C+VDLLGRAG++++A  L
Sbjct: 344 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL 403

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP + D A  W +LLGAC+IH+NVE+ E+A + +  LEP+   +YVLLSNIYS+A  
Sbjct: 404 IESMPIKPDGA-VWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 462

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
               + +R  MKE  ++K+PGCS++E    +H F+ GD +H QS++++  LE L   + +
Sbjct: 463 SKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQ 522

Query: 789 EGYVPDTSCVLHNVNEEEKE--TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           E   P+      N  E  K+  T +  HSEKLA+AFG+LNT  G  + + KNLR+C DCH
Sbjct: 523 EFGKPEKD----NREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCH 578

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              K +SKI  R++ +RD  RFHHF+NG+CSC DYW
Sbjct: 579 LFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 20/429 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A+  QF +A+  Y +M R   +P+ F FP  LK+ A +    LG Q H  + 
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKWD 162
           K G       V   L++MY K GS + +  KVF+    + K  V +N++++      K  
Sbjct: 68  KVGCVFEPF-VQTGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A+  FR M    V  +S TL+ +  AC +      L LG  +H ++L+ G + +  ++N
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVS---PINLELGSSLHCSTLKYGFDSDVSVVN 182

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
             + MY K G V+ A+ LF     + L+SWN +VS  +QN      +   R M + G+ P
Sbjct: 183 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V++  VL +C++L     G E+  + ++      N F+ +AL++MY  C  +   + V
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVE-FKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + ++ +  W A+I GYG + + E A+ LF +M   +G+ P+ T    V+ AC  S A
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR-SGIEPDGTAFVCVLSAC--SHA 358

Query: 402 FPDKEGIHGHAI-----KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
               +G+    +     +L  G + Y  + ++D+  R GR++ ++T+ + M ++ D   W
Sbjct: 359 GLTDQGLEYFKMMKRNYQLEPGPEHY--SCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416

Query: 456 NTMITGYTI 464
             ++    I
Sbjct: 417 GALLGACKI 425



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 10/343 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T C  + +    S ++ +   +A+L + +M    +  ++     ++ A     +L LG  
Sbjct: 108 TVCYNALVSGYVSNSKCS---DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSS 164

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H   +KYG+  S V+V N  + MY KCGS  +   K+FD +  K  +SWN+M++   + 
Sbjct: 165 LHCSTLKYGFD-SDVSVVNCFITMYMKCGSVNY-AQKLFDEMPVKGLISWNAMVSGYAQN 222

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G     LE +R M  + V P   TLV V  +C+NL  +    +G +V       G   N 
Sbjct: 223 GLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS---VGHEVEFKMQASGFTSNP 279

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ NAL+ MYA+ G +  A+ +F    +R LVSW  I+     +     AV   ++M   
Sbjct: 280 FLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRS 339

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GI+PDG +   VL ACSH  + D G E      RN  L       S +VD+      ++ 
Sbjct: 340 GIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKE 399

Query: 338 GRRVFDFISDKKI-ALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            + + + +  K   A+W A++     ++  E A + F ++ E+
Sbjct: 400 AQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIEL 442


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 391/673 (58%), Gaps = 41/673 (6%)

Query: 220 MNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           +N L+A    +G   V  A ++F    + D+++WN+++ +   ++    A+    +M  R
Sbjct: 13  LNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72

Query: 278 GIK-PDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNC 332
               PD  +  S+L  C+ L     GK +H     Y L +D+ I+ +     L++MY  C
Sbjct: 73  SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETT-----LLNMYAAC 127

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            +++  R +F+ +  +   +W +MI+GY +N    EAL+L+ KMEE  G  P+  TM+++
Sbjct: 128 GDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEE-DGFSPDEVTMATL 186

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           V AC   +       +H H  ++ +     + +AL++MY++ G ++ ++ +FD +  +D 
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDV 246

Query: 453 VSWNTMITGYTICGQHGDALMLLREM---QNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            +W+ +I GY    +  +AL L RE+    NM                   +PN +T++ 
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNM-------------------RPNEVTILA 287

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           V+  C  L  L  G+ +H Y  R      V + ++L+DM++KCG ++ A+R+FD M  ++
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +I+WN ++  + +HG G+E L   + M     +  +++P+E+TFI +  ACSH+G+V EG
Sbjct: 348 LISWNSMVNGFALHGLGREALAQFRLM-----QTTDLQPDEITFIGVLTACSHAGLVQEG 402

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             LFY+++  YG+    +HY C+VDLL RAG + +A + I +MP + D A  W S+LGAC
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA-IWGSMLGAC 461

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R++ N+E+GE AA+ L  LEP     Y+LLSNIY+  ++W++   VR+ M E G++K PG
Sbjct: 462 RVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPG 521

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           CS +   +  H FLAGD SH +  ++   L  + E+++  GYV DTS VL N+++ +KE 
Sbjct: 522 CSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEE 581

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            +  HSEKLA+ +G+L +  G  I + KNLRVC+DCH   K +SKI  R+I LRD  RFH
Sbjct: 582 SVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFH 641

Query: 870 HFKNGTCSCGDYW 882
           HFK+G+CSC DYW
Sbjct: 642 HFKDGSCSCRDYW 654



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 224/439 (51%), Gaps = 26/439 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSN 192
           Y VF    E D ++WNSM+           AL+++  ML  S   P  FT  S+   C+ 
Sbjct: 32  YSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCAL 91

Query: 193 LSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L      ++G+ +HG  ++ +   + +I   L+ MYA  G +  A+ LF+    R+ V W
Sbjct: 92  LLE---FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW 148

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++S   +N    EA++  ++M   G  PD V++A+++ AC+ L+ L  G ++H++   
Sbjct: 149 TSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            D+ I  + +GSALV+MY  C +++  R+VFD +SDK +  W+A+I GY +N    EAL 
Sbjct: 209 MDMKI-CAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF ++   + + PN  T+ +V+ AC +         +H +  +   G    + N+L+DM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           S+ G I+ +K IFD M  +D +SWN+M+ G+ + G   +AL   R MQ  +         
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD--------- 378

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMY 549
                    +P+ IT + VL  C     + +GK++  Y I  +    +       +VD+ 
Sbjct: 379 --------LQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLL 429

Query: 550 AKCGCLNFARRVFDLMPVR 568
            + G L  AR    +MP++
Sbjct: 430 CRAGLLAEAREFIRVMPLQ 448



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 222/431 (51%), Gaps = 32/431 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   LR+   SN  R A+ SY EM  RS   PD F FP++LK  A + +  +GK +H  
Sbjct: 45  TWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ 104

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VVKY    S + +  TL+NMY  CG D+     +F+R+  +++V W SMI+   +    +
Sbjct: 105 VVKYMLH-SDLYIETTLLNMYAACG-DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMN 221
            AL  ++ M      P   T+ ++  AC+ L     G++L   +    +++      + +
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC---AVLGS 219

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIK 280
           AL+ MYAK G +  A+ +F    D+D+ +W+ ++    +N++  EA+   R++A    ++
Sbjct: 220 ALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYCNCREVE 336
           P+ V+I +V+ AC+ L  L+TG+ +H Y  R    + + ++NS     L+DM+  C +++
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNS-----LIDMFSKCGDID 334

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +R+FD +S K +  WN+M+ G+  +    EAL  F ++ +   L P+  T   V+ AC
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQF-RLMQTTDLQPDEITFIGVLTAC 393

Query: 397 VRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             +       + F + E ++G  +K     + Y    ++D+  R G +  ++     M +
Sbjct: 394 SHAGLVQEGKKLFYEIEALYGVRLK----SEHY--GCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 450 R-DTVSWNTMI 459
           + D   W +M+
Sbjct: 448 QPDGAIWGSML 458



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 180/351 (51%), Gaps = 25/351 (7%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R K  W   +    +++   EA+L Y +M      PD      ++ A A ++DL +G ++
Sbjct: 143 RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKL 202

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H+H+ +    + +V + + LVNMY KCG D+    +VFD++++KD  +W+++I    +  
Sbjct: 203 HSHIREMDMKICAV-LGSALVNMYAKCG-DLKTARQVFDKLSDKDVYAWSALIFGYVKNN 260

Query: 160 KWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           +   AL+ FR +   SN+ P+  T+++V  AC+ L     L  GR VH    R  + ++ 
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLG---DLETGRWVHDYITRTQKGHSV 317

Query: 219 IM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + N+L+ M++K G +D AK +F S   +DL+SWN++V+  + +    EA+   R M   
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTT 377

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGK----EIHA-YALRNDILIDNSFVGSALVDMYCNC 332
            ++PD ++   VL ACSH  ++  GK    EI A Y +R    + +   G  +VD+ C  
Sbjct: 378 DLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVR----LKSEHYG-CMVDLLCRA 432

Query: 333 REVECGR---RVFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
             +   R   RV     D   A+W +M+     Y   E  EEA    +K+E
Sbjct: 433 GLLAEAREFIRVMPLQPDG--AIWGSMLGACRVYNNLELGEEAARFLLKLE 481


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/783 (34%), Positives = 432/783 (55%), Gaps = 78/783 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +  + R     +A+L +IEM  + + PDNF  P VLKA   +Q + LGK +H +V
Sbjct: 149 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 208

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+G + V V+++LV+MYGKCG  + D  KVFD + EK+ V+WNSMI    + G    
Sbjct: 209 LKMGFG-ACVFVSSSLVDMYGKCGV-LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQE 266

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFI 219
           A++ F  M    +EP+  T+ S   A +NL   D L  G+Q H     NSL   + +  +
Sbjct: 267 AIDVFYDMRVEGIEPTRVTVASFLSASANL---DALIEGKQGHAIAILNSL---DLDNIL 320

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            ++++  Y+K+G ++DA+ +F    ++D+V+WN ++SS  Q+ +  +A+     M    +
Sbjct: 321 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 380

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           + D V+++S+L A +    +  GKE H Y +R ++  D   V ++++DMY  C  ++  R
Sbjct: 381 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESD-VVVANSIIDMYAKCERIDDAR 439

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VFD  +++ + LWN ++  Y Q     EAL LF +M+    + PN  + +SV+      
Sbjct: 440 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQ-FDSVPPNVISWNSVI------ 492

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                          LG  R+  V  A  DM+S+M  +     +         ++W T+I
Sbjct: 493 ---------------LGFLRNGQVNEA-KDMFSQMQSLGFQPNL---------ITWTTLI 527

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           +G    G   +A++  ++MQ               E  +RP   SIT  +VL  C  + +
Sbjct: 528 SGLAQSGFGYEAILFFQKMQ---------------EAGIRPSIASIT--SVLLACTDIPS 570

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  G+ IH +  R+     V V ++LVDMYAKCG ++ A++VF +M  + +  +N +I A
Sbjct: 571 LWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISA 630

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           Y +HG+  E L L K++  EG     ++P+ +TF ++ +ACSH+G+V+EG++LF  M   
Sbjct: 631 YALHGQAVEALALFKHLQKEG-----IEPDSITFTSILSACSHAGLVNEGLNLFADMVSK 685

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           + + P  +HY CVV LL R G +++A +LI  MP + D A    SLL ACR H  +E+GE
Sbjct: 686 HNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPD-AHILGSLLTACREHHEIELGE 744

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
             +++LF LEP  + +YV LSN Y++A  W +  ++R  MK  G+RK PGCSWI+ G ++
Sbjct: 745 YLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKL 804

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           + F+AGDGSH ++E+++  L  L   MR  GYVP  S      NEE     LC  ++K  
Sbjct: 805 NVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIAS------NEEN----LCSRAQKFI 854

Query: 820 IAF 822
             F
Sbjct: 855 HGF 857



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 266/533 (49%), Gaps = 41/533 (7%)

Query: 139 RITEKDQ------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ++ EKD+       S+   I++LC+ G    ++     M + + +        +   C  
Sbjct: 32  KLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCV- 90

Query: 193 LSRRDGLRLGRQVHGNSLRVGEW---NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                 L  G+Q+H   L+ G++   N ++   L+  YAK    + A  LF     R++ 
Sbjct: 91  --YERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVF 148

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SW  IV    +     +A++   +M   G+ PD   + +VL AC  L+++  GK +H Y 
Sbjct: 149 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 208

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L+        FV S+LVDMY  C  +E  R+VFD + +K +  WN+MI GY QN  ++EA
Sbjct: 209 LKMG-FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEA 267

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL--GLGRDRYVQNAL 427
           + +F  M  V G+ P   T++S + A    +A    EG  GHAI +   L  D  + +++
Sbjct: 268 IDVFYDM-RVEGIEPTRVTVASFLSASANLDALI--EGKQGHAIAILNSLDLDNILGSSI 324

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           ++ YS++G IE ++ +F  M  +D V+WN +I+ Y    Q G AL +   M      ++ 
Sbjct: 325 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLM------RSE 378

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           N  +D           S+TL ++L      S +  GKE H Y IR  L +DVVV ++++D
Sbjct: 379 NLRFD-----------SVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 427

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYAKC  ++ AR+VFD    R+++ WN ++ AY   G   E L+L   M  +      V 
Sbjct: 428 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFD-----SVP 482

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
           PN +++ ++      +G V+E  D+F +M+   G +P+   +  ++  L ++G
Sbjct: 483 PNVISWNSVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWTTLISGLAQSG 534



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 24/186 (12%)

Query: 510 VLPGCGALSALAKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +L GC    AL  G++IHA  ++N    A +  V + LV  YAKC     A R+F  + V
Sbjct: 85  LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 144

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           RNV +W  I+      G  ++ L     M   G     V P+      +  AC    ++ 
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG-----VFPDNFVLPNVLKACGSLQLIG 199

Query: 628 EGMDLF-YKMKDDYGIEPSPDHYACV------VDLLGRAGKVEDAYQLINMMPPEFDKAG 680
            G  +  Y +K  +G        ACV      VD+ G+ G +EDA ++ + M  +     
Sbjct: 200 LGKGVHGYVLKMGFG--------ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK--NVV 249

Query: 681 AWSSLL 686
            W+S++
Sbjct: 250 TWNSMI 255


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/595 (38%), Positives = 351/595 (58%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S++ AC+  + L   + IH++  R+  L  + F+ ++L+ MYC C  V   R VFD I  
Sbjct: 67  SIITACAQSKNLAGARAIHSHLSRSR-LAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPT 125

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W  +ITGY QN+   EAL L   M   A   P+  T +S + A          E 
Sbjct: 126 RDVVSWTYLITGYAQNDMPAEALGLLPDMLR-ARFRPSGFTFTSFLKAAGACGGRGIGEQ 184

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H  A+K  L  D YV +AL+DMY+R  +++++  +FD ++ ++ VSWN +I G+   G 
Sbjct: 185 MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGD 244

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
               LM   EMQ       RN                 T  +V      + AL +G+ +H
Sbjct: 245 GETTLMKFAEMQ-------RNGF----------GATHFTYSSVFSALARIGALEQGRWVH 287

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++       V + ++ MYAK G +  AR+VFD +  R+++TWN ++ A+  +G G+
Sbjct: 288 AHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGK 347

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + +   G     ++ N++TF+++  ACSH G+V EG   F  MKD Y +EP  D
Sbjct: 348 EAVAHFEEIRKYG-----IQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEID 401

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY   VDLLGRAG +++A   +  MP E   A  W +LLGACR+H+N +IG+ AA ++F 
Sbjct: 402 HYVSFVDLLGRAGLLKEALIFVFKMPME-PTAAVWGALLGACRMHKNAKIGQYAADHVFE 460

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+P+     VLL NIY+S   WD A  VRK MK  GV+KEP CSW+E  + +H F+A D 
Sbjct: 461 LDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDS 520

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H +SE+++   E ++ R++K GYVP+T  VL ++ E+E+ET L  HSEK+A+AF ++N 
Sbjct: 521 THPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINM 580

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G TIR+ KN+R+C DCH A +++S++  REI++RD  RFHHF NG+CSCGDYW
Sbjct: 581 PAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 22/421 (5%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            L    ++L   + P+     S+  AC+      G R        S   G+   F++N+L
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGD--GFLLNSL 103

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G V DA+ +F     RD+VSW  +++  +QND   EA+  L  M     +P G
Sbjct: 104 IHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSG 163

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            +  S L A         G+++HA A++ + L ++ +VGSAL+DMY  C++++   RVFD
Sbjct: 164 FTFTSFLKAAGACGGRGIGEQMHALAVKYN-LDEDVYVGSALLDMYARCQQMDMAIRVFD 222

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           ++  K    WNA+I G+ +    E  LM F +M+   G      T SSV  A  R  A  
Sbjct: 223 WLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQR-NGFGATHFTYSSVFSALARIGALE 281

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               +H H IK G     +V N ++ MY++ G +  ++ +FD ++ RD V+WNTM+T + 
Sbjct: 282 QGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFA 341

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G   +A+    E++           Y +       + N IT ++VL  C     + +G
Sbjct: 342 QYGLGKEAVAHFEEIRK----------YGI-------QLNQITFLSVLTACSHGGLVKEG 384

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGM 582
           K+         +  ++    + VD+  + G L  A      MP+      W  ++ A  M
Sbjct: 385 KQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRM 444

Query: 583 H 583
           H
Sbjct: 445 H 445



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 143/270 (52%), Gaps = 6/270 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G  TR   SW   +   A+++   EA+    +M R+  +P  F F + LKA        +
Sbjct: 122 GIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGI 181

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+HA  VKY      V V + L++MY +C   M    +VFD +  K++VSWN++IA  
Sbjct: 182 GEQMHALAVKYNLD-EDVYVGSALLDMYARC-QQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            R G  +  L  F  M  +    + FT  SV    S L+R   L  GR VH + ++ G+ 
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSV---FSALARIGALEQGRWVHAHMIKSGQK 296

Query: 216 NT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            T F+ N ++ MYAK G + DA+ +F   + RDLV+WNT++++ +Q     EAV    ++
Sbjct: 297 LTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEI 356

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
              GI+ + ++  SVL ACSH  ++  GK+
Sbjct: 357 RKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 22/248 (8%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P      S++ AC +S+       IH H  +  L  D ++ N+L+ MY + G +  ++
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD +  RD VSW  +ITGY       +AL LL +M                    R +
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRA-----------------RFR 160

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+  T  + L   GA      G+++HA A++  L  DV VGSAL+DMYA+C  ++ A RV
Sbjct: 161 PSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRV 220

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +N ++WN +I  +   G+G+  L     M   G           T+ ++F+A +
Sbjct: 221 FDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNG-----FGATHFTYSSVFSALA 275

Query: 622 HSGMVSEG 629
             G + +G
Sbjct: 276 RIGALEQG 283



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 167/332 (50%), Gaps = 20/332 (6%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK---YGYGLSSVTVANTLVNMYGKCGS 128
           ++ P    + +++ A A  ++L+  + IH+H+ +    G G     + N+L++MY KCG+
Sbjct: 57  ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGF----LLNSLIHMYCKCGA 112

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM---MLYSNVEPSSFTLVS 185
            + D   VFD I  +D VSW  +I     + + D+  EA  +   ML +   PS FT  S
Sbjct: 113 -VSDARHVFDGIPTRDVVSWTYLITG---YAQNDMPAEALGLLPDMLRARFRPSGFTFTS 168

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
              A      R    +G Q+H  +++   + + ++ +AL+ MYA+  ++D A  +F   +
Sbjct: 169 FLKAAGACGGRG---IGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            ++ VSWN +++  ++       +M   +M   G      + +SV  A + +  L+ G+ 
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +HA+ +++   +  +FV + ++ MY     +   R+VFD +  + +  WN M+T + Q  
Sbjct: 286 VHAHMIKSGQKL-TAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYG 344

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +EA+  F ++ +  G+  N  T  SV+ AC
Sbjct: 345 LGKEAVAHFEEIRKY-GIQLNQITFLSVLTAC 375


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/702 (36%), Positives = 388/702 (55%), Gaps = 62/702 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA----VMFL 271
           N    N+L++  A+ G V D + LF S   RD VS+N +++  S+      A    V  L
Sbjct: 76  NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
           R  A  G++P  ++++ V+   S L     G+++H   LR       +F GS LVDMY  
Sbjct: 136 RDEA--GVRPSRITMSGVVMVASALGDRALGRQVHCQILRLG-FGAYAFTGSPLVDMYAK 192

Query: 332 CREVECGRRVFDFISDKKIAL-------------------------------WNAMITGY 360
              +   RRVFD +  K + +                               W  M+TG 
Sbjct: 193 VGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGL 252

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            QN  + EAL +F +M    G+  +  T  S++ AC    A  + + IH +  +     +
Sbjct: 253 TQNGLESEALDVFRRMR-AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDN 311

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V +AL+DMYS+   + +++ +F  M  ++ +SW  MI GY   G   +A+ +  EMQ 
Sbjct: 312 VFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ- 370

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                 R+ +          KP+  TL +V+  C  L++L +G + H  A+ + L   V 
Sbjct: 371 ------RDGI----------KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVT 414

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           V +ALV +Y KCG +  A R+FD M   + ++W  ++M Y   G+ +E ++L + M+++G
Sbjct: 415 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG 474

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                VKP+ VTFI + +ACS SG+V +G   F+ M+ D+ I P  DHY C++DL  R+G
Sbjct: 475 -----VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSG 529

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            ++ A + I  MP   D  G W++LL ACR+  ++EIG+ AA+NL  L+P   + YVLL 
Sbjct: 530 WLKQAEEFIKQMPRCPDAFG-WATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLC 588

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           ++++S   W+    +R+ M++  V+KEPGCSWI++ +++H F A D SH  S  ++  L+
Sbjct: 589 SMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQ 648

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L+ +M +EGY PD S VLH+V + EK  +L  HSEKLAIAFG++  PP   IR+ KNLR
Sbjct: 649 WLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLR 708

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH ATKFISKI  R+I++RD  RFH F NG CSCGD+W
Sbjct: 709 VCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 244/513 (47%), Gaps = 65/513 (12%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           ++   N+L++   + G  + D+ ++F  + ++D VS+N+++A   R G    A  A+  +
Sbjct: 76  NLVTGNSLLSALARAGL-VRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVAL 134

Query: 172 LY--SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           L   + V PS  T+  V +  S L  R    LGRQVH   LR+G     F  + L+ MYA
Sbjct: 135 LRDEAGVRPSRITMSGVVMVASALGDR---ALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191

Query: 229 KLGRVDDAK-------------------------------TLFKSFEDRDLVSWNTIVSS 257
           K+G + DA+                                LF++ E+RD ++W T+V+ 
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           L+QN    EA+   R+M   G+  D  +  S+L AC  L  L+ GK+IHAY  R     D
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT-CYED 310

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N FVGSALVDMY  CR V     VF  +  K I  W AMI GYGQN   EEA+ +F +M+
Sbjct: 311 NVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 370

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G+ P+  T+ SV+ +C    +  +    H  A+  GL     V NAL+ +Y + G I
Sbjct: 371 R-DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSI 429

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E +  +FD+M   D VSW  ++ GY   G+  + + L  +M              L + V
Sbjct: 430 EDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM--------------LSKGV 475

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV----GSALVDMYAKCG 553
              KP+ +T + VL  C     + KG+   +Y        D+V      + ++D+Y++ G
Sbjct: 476 ---KPDGVTFIGVLSACSRSGLVDKGR---SYFHSMQQDHDIVPLDDHYTCMIDLYSRSG 529

Query: 554 CLNFARRVFDLMP-VRNVITWNVIIMAYGMHGE 585
            L  A      MP   +   W  ++ A  + G+
Sbjct: 530 WLKQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 207/445 (46%), Gaps = 52/445 (11%)

Query: 65  YIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
           Y+ + R +  ++P       V+   + + D +LG+Q+H  +++ G+G  + T  + LV+M
Sbjct: 131 YVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFT-GSPLVDM 189

Query: 123 YGKCGSDMWDVYKVFDR-------------------------------ITEKDQVSWNSM 151
           Y K G  + D  +VFD                                I E+D ++W +M
Sbjct: 190 YAKVGP-IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTM 248

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +  L + G    AL+ FR M    V    +T  S+  AC  L+    L  G+Q+H    R
Sbjct: 249 VTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALA---ALEEGKQIHAYITR 305

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
              E N F+ +AL+ MY+K   V  A+ +F+    ++++SW  ++    QN    EAV  
Sbjct: 306 TCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRV 365

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M   GIKPD  ++ SV+ +C++L  L+ G + H  AL +  L     V +ALV +Y 
Sbjct: 366 FSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG-LRPYVTVSNALVTLYG 424

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +E   R+FD +S      W A++ GY Q    +E + LF KM    G+ P+  T  
Sbjct: 425 KCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLS-KGVKPDGVTFI 483

Query: 391 SVVPACVRSEAFPDKEGIHGHAIK----LGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            V+ AC RS    DK   + H+++    +    D Y    ++D+YSR G ++ ++     
Sbjct: 484 GVLSACSRS-GLVDKGRSYFHSMQQDHDIVPLDDHY--TCMIDLYSRSGWLKQAEEFIKQ 540

Query: 447 M-EVRDTVSWNTMITGYTICGQHGD 470
           M    D   W T+++    C   GD
Sbjct: 541 MPRCPDAFGWATLLSA---CRLRGD 562



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 203/431 (47%), Gaps = 60/431 (13%)

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL------------ 352
           +HA  LR       +++ + L+  Y +   +   RRVFD +  + +              
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 353 -------------------WNAMITGYGQNEYDEEALMLFIK-MEEVAGLWPNATTMSSV 392
                              +NA++ G+ +      A   ++  + + AG+ P+  TMS V
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 393 VPACVRSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           V   + + A  D+     +H   ++LG G   +  + L+DMY+++G I  ++ +FD+ME 
Sbjct: 152 V---MVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEG 208

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP------- 502
           ++ V  NTMITG   C    +A  L   ++  +       V  L +  L  +        
Sbjct: 209 KNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM 268

Query: 503 -------NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                  +  T  ++L  CGAL+AL +GK+IHAY  R     +V VGSALVDMY+KC  +
Sbjct: 269 RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSV 328

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A  VF  M  +N+I+W  +I+ YG +G G+E + +   M  +G     +KP++ T  +
Sbjct: 329 RLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG-----IKPDDFTLGS 383

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           + ++C++   + EG   F+ +    G+ P       +V L G+ G +EDA++L + M   
Sbjct: 384 VISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM--S 440

Query: 676 FDKAGAWSSLL 686
           F    +W++L+
Sbjct: 441 FHDQVSWTALV 451



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 10/289 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++    EA+  +  M    +  D + F ++L A   +  L  GKQIHA++
Sbjct: 244 TWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 303

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +  Y   +V V + LV+MY KC S +     VF R+  K+ +SW +MI    + G  + 
Sbjct: 304 TRTCYE-DNVFVGSALVDMYSKCRS-VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEE 361

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M    ++P  FTL SV  +C+NL+    L  G Q H  +L  G      + NA
Sbjct: 362 AVRVFSEMQRDGIKPDDFTLGSVISSCANLA---SLEEGAQFHCLALVSGLRPYVTVSNA 418

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++DA  LF      D VSW  +V   +Q  K  E +    +M  +G+KPD
Sbjct: 419 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPD 478

Query: 283 GVSIASVLPACSHLEMLDTGKE-IHAYALRNDIL-IDNSFVGSALVDMY 329
           GV+   VL ACS   ++D G+   H+    +DI+ +D+ +  + ++D+Y
Sbjct: 479 GVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY--TCMIDLY 525


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/610 (40%), Positives = 362/610 (59%), Gaps = 35/610 (5%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---- 333
            ++P   SI S++P C+ L  L   K+I AY ++     +N  V + L++ +C       
Sbjct: 30  ALEPPSSSILSLIPKCTSLREL---KQIQAYTIKTHQ--NNPTVLTKLIN-FCTSNPTIA 83

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++   R+FD I    I L+N M  GY + +    A++L  ++   +GL P+  T SS++
Sbjct: 84  SMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVL-CSGLLPDDYTFSSLL 142

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC R +A  + + +H  A+KLG+G + YV   L++MY+    ++ ++ +FD +     V
Sbjct: 143 KACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV 202

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           ++N +IT      +  +AL L RE+Q               E+ L  KP  +T++  L  
Sbjct: 203 AYNAIITSCARNSRPNEALALFRELQ---------------ESGL--KPTDVTMLVALSS 245

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  L AL  G+ IH Y  +N     V V +AL+DMYAKCG L+ A  VF  MP R+   W
Sbjct: 246 CALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAW 305

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           + +I+AY  HG G + + +L+ M     +  +V+P+E+TF+ +  ACSH+G+V EG + F
Sbjct: 306 SAMIVAYATHGHGSQAISMLREM-----KKAKVQPDEITFLGILYACSHTGLVEEGYEYF 360

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
           + M  +YGI PS  HY C++DLLGRAG++E+A + I+ +P +      W +LL +C  H 
Sbjct: 361 HSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIK-PTPILWRTLLSSCSSHG 419

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NVE+ ++  Q +F L+      YV+LSN+ +    WD    +RK M + G  K PGCS I
Sbjct: 420 NVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSI 479

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLC 812
           E  + +H+F +GDG H  S  LH  L+ L + ++  GYVPDTS V + ++ +EEKE +L 
Sbjct: 480 EVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLR 539

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLAI +G+LNTPPGTTIRV KNLRVC DCH A KFIS I  R+IILRDV+RFHHFK
Sbjct: 540 YHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFK 599

Query: 873 NGTCSCGDYW 882
           +G CSCGDYW
Sbjct: 600 DGKCSCGDYW 609



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 220/456 (48%), Gaps = 40/456 (8%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK---LGR 232
           +EP S +++S+   C++L      R  +Q+   +++  + N  ++  L+        +  
Sbjct: 31  LEPPSSSILSLIPKCTSL------RELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIAS 84

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D A  +F      D+V +NT+    ++ D  L A++   Q+   G+ PD  + +S+L A
Sbjct: 85  MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L+ L+ GK++H  A++  +  DN +V   L++MY  C +V+  RRVFD I +  +  
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVG-DNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVA 203

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           +NA+IT   +N    EAL LF +++E +GL P   TM   + +C    A      IH + 
Sbjct: 204 YNAIITSCARNSRPNEALALFRELQE-SGLKPTDVTMLVALSSCALLGALDLGRWIHEYV 262

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            K G  +   V  AL+DMY++ G ++ + ++F DM  RDT +W+ MI  Y   G    A+
Sbjct: 263 KKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAI 322

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAI 531
            +LREM+                   + +P+ IT + +L  C     + +G E  H+   
Sbjct: 323 SMLREMKKA-----------------KVQPDEITFLGILYACSHTGLVEEGYEYFHSMTH 365

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAYGMHGEGQEVL 590
              +   +     ++D+  + G L  A +  D +P++   I W  ++ +   HG   E+ 
Sbjct: 366 EYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHG-NVEMA 424

Query: 591 ELLKNMVAE--GSRGGEVKPNEVTFIALFAACSHSG 624
           +L+   + E   S GG+       ++ L   C+ +G
Sbjct: 425 KLVIQRIFELDDSHGGD-------YVILSNLCARNG 453



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 207/426 (48%), Gaps = 26/426 (6%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           E   + ++P + +  +++     +++L   KQI A+ +K     ++ TV   L+N    C
Sbjct: 25  EPNTAALEPPSSSILSLIPKCTSLREL---KQIQAYTIKTHQ--NNPTVLTKLINF---C 76

Query: 127 GSD-----MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
            S+     M   +++FD+I + D V +N+M     RF     A+     +L S + P  +
Sbjct: 77  TSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDY 136

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLF 240
           T  S+  AC+ L     L  G+Q+H  ++++G   N ++   L+ MY     VD A+ +F
Sbjct: 137 TFSSLLKACARLK---ALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVF 193

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
               +  +V++N I++S ++N +  EA+   R++   G+KP  V++   L +C+ L  LD
Sbjct: 194 DKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALD 253

Query: 301 TGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
            G+ IH Y  +N    D    V +AL+DMY  C  ++    VF  +  +    W+AMI  
Sbjct: 254 LGRWIHEYVKKNG--FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVA 311

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLG 418
           Y  + +  +A+ +  +M++ A + P+  T   ++ AC  +    +  E  H    + G+ 
Sbjct: 312 YATHGHGSQAISMLREMKK-AKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIV 370

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDALMLLRE 477
                   ++D+  R GR+E +    D++ ++ T + W T+++    C  HG+  M    
Sbjct: 371 PSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS---CSSHGNVEMAKLV 427

Query: 478 MQNMEE 483
           +Q + E
Sbjct: 428 IQRIFE 433



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 142/256 (55%), Gaps = 6/256 (2%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  AR +    AIL   ++  S + PD++ F ++LKA A ++ L  GKQ+H   VK G G
Sbjct: 108 RGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVG 167

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             ++ V  TL+NMY  C +D+    +VFD+I E   V++N++I +  R  + + AL  FR
Sbjct: 168 -DNMYVCPTLINMYTAC-NDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFR 225

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            +  S ++P+  T++    +C+ L     L LGR +H    + G +    +  AL+ MYA
Sbjct: 226 ELQESGLKPTDVTMLVALSSCALLG---ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYA 282

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +DDA ++FK    RD  +W+ ++ + + +    +A+  LR+M    ++PD ++   
Sbjct: 283 KCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLG 342

Query: 289 VLPACSHLEMLDTGKE 304
           +L ACSH  +++ G E
Sbjct: 343 ILYACSHTGLVEEGYE 358



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 2/152 (1%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C  ++   + S AR+++  EA+  + E+  S ++P +      L + A +  L LG+ IH
Sbjct: 200 CVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIH 259

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V K G+    V V   L++MY KCGS + D   VF  +  +D  +W++MI      G 
Sbjct: 260 EYVKKNGFD-QYVKVNTALIDMYAKCGS-LDDAVSVFKDMPRRDTQAWSAMIVAYATHGH 317

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              A+   R M  + V+P   T + +  ACS+
Sbjct: 318 GSQAISMLREMKKAKVQPDEITFLGILYACSH 349


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/618 (40%), Positives = 346/618 (55%), Gaps = 60/618 (9%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           ++FV S+L+  Y         R V D +  + +  W+A+I  +  +   E A  L  +M 
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 378 EVAGLWPNATTMSSVVPACVRS---------------EAF-PDKEGI------------- 408
              G+ PN  T + +V    RS               E F PD  G+             
Sbjct: 114 S-DGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDV 172

Query: 409 ------HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                 HG+ +K G   D  V  AL+DMY + GR +    +FD+    D  S N ++ G 
Sbjct: 173 AVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232

Query: 463 TICGQHGDALMLLREMQNMEEEKN-----------RNNVYDLDETVLRP-------KPNS 504
           +   Q  +AL L RE      E N             N  DL+   L         +PNS
Sbjct: 233 SRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNS 292

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           +T+  VLP    ++AL  G+  H +++R     D+ VGSALVDMYAKCG +  AR +F+ 
Sbjct: 293 VTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA 352

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           MP RNV++WN +I  Y MHGE +  + L ++M     +  + KP+ VTF  +  ACS +G
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSM-----QSSKEKPDLVTFTCVLGACSQAG 407

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
              EG   F +M+  +GI P  +HYAC+V LLGRAGK++DAY +IN MP E D    W S
Sbjct: 408 WTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGC-IWGS 466

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLG+CR+H NV + E+AA+NLF LEP+ A +YVLLSNIY+S ++WD    +R  MK +G+
Sbjct: 467 LLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGL 526

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
           +KE GCSWIE  +++H  LAGD SH     +   L++L+  MR+ G+ P T  VLH+V E
Sbjct: 527 KKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEE 586

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           +EK+ +L  HSEKLA+A G+++T  GT ++V KNLR+C DCH+A KFIS  E REI +RD
Sbjct: 587 QEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRD 646

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHFK+G CSC DYW
Sbjct: 647 TNRFHHFKDGKCSCADYW 664



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 188/440 (42%), Gaps = 89/440 (20%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW------------------------ 251
           + F+ ++L+  Y + G   DA+++      R +V W                        
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 252 -----------NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
                      N +VS L+++ +  +AV+ L +M   G  PD   ++  L A   +  + 
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G+++H Y ++    +D + V +AL+DMY  C   +   RVFD  S   +A  NA++ G 
Sbjct: 174 VGEQLHGYVVKAGCRLD-ACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232

Query: 361 GQNEYDEEALMLF-------IKMEEVA---------------------------GLWPNA 386
            +N    EAL LF       I++  V+                           G+ PN+
Sbjct: 233 SRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNS 292

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            T+  V+PA     A       H  +++ G   D YV +AL+DMY++ GR+  ++ IF+ 
Sbjct: 293 VTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEA 352

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  R+ VSWN MI GY + G+  +A+ L R MQ+ +E                 KP+ +T
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE-----------------KPDLVT 395

Query: 507 LMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
              VL  C       +G+   +    ++ ++  +   + +V +  + G L+ A  + + M
Sbjct: 396 FTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQM 455

Query: 566 PVR-NVITWNVIIMAYGMHG 584
           P   +   W  ++ +  +HG
Sbjct: 456 PFEPDGCIWGSLLGSCRVHG 475



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 142/287 (49%), Gaps = 43/287 (14%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           RS + R+A+L+ + M      PD       L AV  + D+++G+Q+H +VVK G  L + 
Sbjct: 133 RSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDA- 191

Query: 114 TVANTLVNMYGKCG-SDMWDVYKVFD---------------------------------- 138
            VA  L++MYGKCG +D  ++ +VFD                                  
Sbjct: 192 CVATALIDMYGKCGRAD--EIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFV 249

Query: 139 -RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            R  E + VSW S++A   + G+   A++ FR M    +EP+S T+  V  A +N++   
Sbjct: 250 GRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIA--- 306

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L  GR  H  SLR G   + ++ +AL+ MYAK GRV DA+ +F++   R++VSWN ++ 
Sbjct: 307 ALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIG 366

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             + + +   AV   R M     KPD V+   VL ACS     + G+
Sbjct: 367 GYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 206/464 (44%), Gaps = 68/464 (14%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           +  D F   ++L A      L  G    A  V  G    +V   + L+  +   G D   
Sbjct: 51  VSRDAFVASSLLHAY-----LRFGATADARSVLDGMPHRTVVGWSALIAAHASHG-DAEG 104

Query: 133 VYKVFDRI----TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            + + +R+     E + ++WN +++ L R G+   A+ A   M      P + T VS AL
Sbjct: 105 AWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDA-TGVSCAL 163

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD------------ 235
             S +     + +G Q+HG  ++ G   +  +  AL+ MY K GR D+            
Sbjct: 164 --SAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMD 221

Query: 236 -------------------AKTLFKSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLR 272
                              A  LF+ F  R    ++VSW +IV+   QN + LEAV   R
Sbjct: 222 VASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFR 281

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M   GI+P+ V+I  VLPA +++  L  G+  H ++LR     D  +VGSALVDMY  C
Sbjct: 282 EMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD-IYVGSALVDMYAKC 340

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V   R +F+ +  + +  WNAMI GY  +   E A+ LF  M+  +   P+  T + V
Sbjct: 341 GRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQS-SKEKPDLVTFTCV 399

Query: 393 VPACVRSEAFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           + AC  S+A   +EG        H H I   +  + Y    ++ +  R G+++ +  I +
Sbjct: 400 LGAC--SQAGWTEEGRSYFNEMQHKHGISPRM--EHYA--CMVTLLGRAGKLDDAYDIIN 453

Query: 446 DMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            M    D   W +++     C  HG+ ++     +N+ + +  N
Sbjct: 454 QMPFEPDGCIWGSLLGS---CRVHGNVVLAEVAAENLFQLEPEN 494



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 67/337 (19%)

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G+ RD +V ++L+  Y R G    ++++ D M  R  V W+ +I  +   G    A  LL
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 476 REMQNMEEEKN-----------------RNNVYDL----DETVLRPKPNSITLMTVLPGC 514
             M++   E N                 R+ V  L     E  L   P++  +   L   
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL---PDATGVSCALSAV 166

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
           G +  +A G+++H Y ++     D  V +AL+DMY KCG  +   RVFD     +V + N
Sbjct: 167 GDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCN 226

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++     + +  E L L +  V  G     ++ N V++ ++ A C  +G   E +DLF 
Sbjct: 227 ALVAGLSRNAQVSEALRLFREFVGRG-----IELNVVSWTSIVACCVQNGRDLEAVDLFR 281

Query: 635 KMKDDYGIEPSPDHYACV-----------------------------------VDLLGRA 659
           +M+ + GIEP+     CV                                   VD+  + 
Sbjct: 282 EMQSE-GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKC 340

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           G+V DA  +   MP  +    +W++++G   +H   E
Sbjct: 341 GRVRDARMIFEAMP--YRNVVSWNAMIGGYAMHGEAE 375



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ +  EA+  + EM    I+P++   P VL A A I  L  G+  H   
Sbjct: 259 SWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFS 318

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+    + V + LV+MY KCG  + D   +F+ +  ++ VSWN+MI      G+ + 
Sbjct: 319 LRKGFH-HDIYVGSALVDMYAKCGR-VRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAEN 376

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLS----RRDGLRLGRQVHGNSLRVGEWNTFI 219
           A+  FR M  S  +P   T   V  ACS        R      +  HG S R+  +   +
Sbjct: 377 AVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMV 436

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
                 +  + G++DDA  +      + D   W +++ S
Sbjct: 437 -----TLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGS 470


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/847 (32%), Positives = 443/847 (52%), Gaps = 47/847 (5%)

Query: 47  ESLRSEARSNQFREAILSYIEMTRSDIQ--------PDNFAFPAVLKAVAGIQDLSLGKQ 98
           ES R   + N+ R+   S ++   S +Q         D+ A+  +L+      D    K 
Sbjct: 12  ESRRLMIQCNRIRQCGFS-VQTAESSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKA 70

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IH  ++K G  L  +   N L+N Y K G D  D   +FD + E++ VS+ ++       
Sbjct: 71  IHCDILKKGSCLD-LFATNILLNAYVKAGFDK-DALNLFDEMPERNNVSYVTLTQGYACQ 128

Query: 159 GKWDLALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
               L     R     N    +SF  + V+L        D   +   +H   +++G + N
Sbjct: 129 DPVGLYSRLHREGHELNPHVFTSFLKLFVSL--------DKAEICWWLHSPIVKLGYDSN 180

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+  AL+  Y+  G VD A+++F+    +D+V W  IVS   +N  F +++  L +M +
Sbjct: 181 AFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGM 240

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G  P+  +  + L A   L      K +H   L+    +D   VG  L+ +Y    ++ 
Sbjct: 241 DGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR-VGVGLLQLYTQLGDMS 299

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              +VF+ +    +  W+ MI  + QN +  +A+ +FI+M E   + PN  T+SS++  C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMRE-GFVVPNEFTLSSILNGC 358

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
              +     E +HG  +K+G   D YV NAL+D+Y++  +++ +  +F ++  ++ VSWN
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWN 418

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           T+I GY   G+ G AL       NM  E  RN V              +T  + L  C +
Sbjct: 419 TVIVGYENLGEGGKAL-------NMFREALRNQV----------SVTEVTFSSALGACAS 461

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L+++  G ++H  AI+   A  V V ++L+DMYAKCG +  A+ VF+ M   +V +WN +
Sbjct: 462 LASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNAL 521

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  HG G++ L +   M     +G + KPN +TF+ + + CS++G++ +G D F  M
Sbjct: 522 ISGYSTHGLGRQALRIFDIM-----KGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESM 576

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             D+GIEP  +HY C+V L GR+G+++ A  LI  +P E      W ++L A     N E
Sbjct: 577 ICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYE-PSVMIWRAMLSASMNQYNEE 635

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
               +A+ +  + P   + YVLLSN+Y+ A+ W     +RK MKE GV+KEPG SWIE  
Sbjct: 636 FARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQ 695

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
            ++H F  G   H   + ++G LE L+ +  + GYVPD + VL ++++EEK+  L  HSE
Sbjct: 696 GDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSE 755

Query: 817 KLAIAFGILNTPPG-TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           +LA+A+G++  P     I + KNLR+C+DCH A K IS I  R++++RD+ RFHHF  G 
Sbjct: 756 RLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGV 815

Query: 876 CSCGDYW 882
           CSC D+W
Sbjct: 816 CSCDDHW 822



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 181/359 (50%), Gaps = 10/359 (2%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK+   W   +     +  F +++     M      P+N+ F   LKA  G+      K 
Sbjct: 209 CKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKS 268

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  ++K  Y L    V   L+ +Y + G DM D +KVF+ + + D V W+ MIA  C+ 
Sbjct: 269 VHGQILKTCYELDP-RVGVGLLQLYTQLG-DMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           G  + A++ F  M    V P+ FTL S+   C+ + +  G  LG Q+HG  ++VG + + 
Sbjct: 327 GFCNKAVDIFIRMREGFVVPNEFTLSSILNGCA-IGKCSG--LGEQLHGLVVKVGFDLDV 383

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           ++ NAL+ +YAK  ++D A  LF     +++VSWNT++       +  +A+   R+    
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRN 443

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            +    V+ +S L AC+ L  ++ G ++H  A++ +       V ++L+DMY  C +++ 
Sbjct: 444 QVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN-AKRVAVSNSLIDMYAKCGDIKV 502

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            + VF+ +    +A WNA+I+GY  +    +AL +F  M+  +   PN  T   V+  C
Sbjct: 503 AQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKG-SDCKPNGLTFLGVLSGC 560


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/681 (36%), Positives = 389/681 (57%), Gaps = 26/681 (3%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           + +H   LR+G + +T+++N ++      G  + +  +    ++ ++  +NT++  L  N
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           D F E++     M   G+ PD  +   VL AC+ +   + G ++H+  ++     D +FV
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD-AFV 145

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
             +L+++Y  C  ++   +VFD I DK  A W A I+GY       EA+ +F ++ E+ G
Sbjct: 146 KISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEM-G 204

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P++ ++  V+ AC R+      E I  +  + G+ R+ +V  AL+D Y + G +E ++
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           ++FD M  ++ VSW++MI GY   G   +AL L  +M              L+E +   K
Sbjct: 265 SVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKM--------------LNEGL---K 307

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+   ++ VL  C  L AL  G         N    + V+G+AL+DMYAKCG ++ A  V
Sbjct: 308 PDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV 367

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  M  ++ + WN  I    M G  ++ L L   M   G     +KP+  TF+ L  AC+
Sbjct: 368 FRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSG-----IKPDRNTFVGLLCACT 422

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G+V EG   F  M+  + + P  +HY C+VDLLGRAG +++A+QLI  MP E + A  
Sbjct: 423 HAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEAN-AIV 481

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLG CR+H++ ++ E+  + L  LEP  + +YVLLSNIY+++  W++A  +R  M E
Sbjct: 482 WGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSE 541

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            GV+K PG SWIE    +H+FL GD SH  SE+++  L  L++ ++  GYVP T  VL +
Sbjct: 542 RGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFD 601

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           + EEEKE  +  HSEKLA+AFG+++T P   I V KNLRVC DCH+A K IS+I  REII
Sbjct: 602 IEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREII 661

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFH F +G CSC DYW
Sbjct: 662 VRDNNRFHCFTDGLCSCKDYW 682



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 240/517 (46%), Gaps = 27/517 (5%)

Query: 85  KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
           + + G   L   K IHA +++ G       + N ++      G+  +  +++ D+  E +
Sbjct: 15  RLIQGFSCLKHLKHIHAALLRLGLD-EDTYLLNKVLRFSFNFGNTNYS-FRILDQTKEPN 72

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
              +N+MI  L     +  ++E +  M    + P SFT   V  AC+ +   +   LG +
Sbjct: 73  IFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSE---LGVK 129

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +H   ++ G E + F+  +L+ +Y K G +D+A  +F    D++  SW   +S      K
Sbjct: 130 MHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGK 189

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EA+   R++   G++PD  S+  VL AC     L +G+ I  Y   N  ++ N FV +
Sbjct: 190 CREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENG-MVRNVFVAT 248

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           ALVD Y  C  +E  R VFD + +K I  W++MI GY  N   +EAL LF KM    GL 
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN-EGLK 307

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P+   M  V+ +C R  A    +             +  +  AL+DMY++ GR++ +  +
Sbjct: 308 PDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV 367

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F  M  +D V WN  I+G  + G   DAL L  +M+    + +RN               
Sbjct: 368 FRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRN--------------- 412

Query: 504 SITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
             T + +L  C     + +G+   ++      L  ++     +VD+  + GCL+ A ++ 
Sbjct: 413 --TFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLI 470

Query: 563 DLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             MP+  N I W  ++    +H + Q V  +LK ++A
Sbjct: 471 KSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 231/459 (50%), Gaps = 38/459 (8%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R    ++ F+E+I  Y  M +  + PD+F FP VLKA A + D  LG ++H+ VVK G 
Sbjct: 80  IRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGC 139

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             +   V  +L+N+Y KCG  + + +KVFD I +K+  SW + I+     GK   A++ F
Sbjct: 140 E-ADAFVKISLINLYTKCGF-IDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMF 197

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW------------N 216
           R +L   + P SF+LV V  AC    +R G           LR GEW            N
Sbjct: 198 RRLLEMGLRPDSFSLVEVLSAC----KRTG----------DLRSGEWIDEYITENGMVRN 243

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+  AL+  Y K G ++ A+++F    ++++VSW++++   + N    EA+    +M  
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+KPD  ++  VL +C+ L  L+ G +  +  +  +  +DNS +G+AL+DMY  C  ++
Sbjct: 304 EGLKPDCYAMVGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMD 362

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               VF  +  K   +WNA I+G   + + ++AL LF +ME+ +G+ P+  T   ++ AC
Sbjct: 363 RAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEK-SGIKPDRNTFVGLLCAC 421

Query: 397 VRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
             +    + +   +       L  +      ++D+  R G ++ +  +   M +  + + 
Sbjct: 422 THAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIV 481

Query: 455 WNTMITGYTICGQHGDALM---LLREMQNMEEEKNRNNV 490
           W  ++ G   C  H D  +   +L+++  +E   + N V
Sbjct: 482 WGALLGG---CRLHRDTQLVEVVLKKLIALEPWHSGNYV 517



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW  ++       + REAI  +  +    ++PD+F+   VL A     DL  G+ I  ++
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G  + +V VA  LV+ YGKCG +M     VFD + EK+ VSW+SMI      G    
Sbjct: 236 TENGM-VRNVFVATALVDFYGKCG-NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKE 293

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG----RQVHGNSLRVGEWNTFI 219
           AL+ F  ML   ++P  + +V V  +C+ L     L LG      ++GN       N+ +
Sbjct: 294 ALDLFFKMLNEGLKPDCYAMVGVLCSCARLG---ALELGDWASNLINGNEFLD---NSVL 347

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             AL+ MYAK GR+D A  +F+    +D V WN  +S L+ +    +A+    QM   GI
Sbjct: 348 GTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGI 407

Query: 280 KPDGVSIASVLPACSHLEMLDTGK 303
           KPD  +   +L AC+H  +++ G+
Sbjct: 408 KPDRNTFVGLLCACTHAGLVEEGR 431


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/686 (36%), Positives = 375/686 (54%), Gaps = 26/686 (3%)

Query: 200 RLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGR  H  +LR+       F+   L+ +Y+KL     A     +     +VS+   +S 
Sbjct: 34  RLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISG 93

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILI 316
            +Q+ + L+A+     M   G++P+  +  S   A +        G ++HA ALR   L 
Sbjct: 94  AAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLP 153

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D++FV  A +DMY     +   RR+FD + ++ +  WNA++T    +    E +  +  +
Sbjct: 154 DDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGL 213

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               G+ PN  ++ +   AC         E  +G   K G G+D  V N+++D Y +   
Sbjct: 214 RGAGGM-PNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRC 272

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  ++ +FD M VR+ VSW +M+  Y   G   +A  +    +   EE            
Sbjct: 273 VGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEE------------ 320

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P    + +VL  C  L  L  G+ +HA A+R+ + +++ V SALVDMY KCG + 
Sbjct: 321 -----PTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIE 375

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A +VF  MP RN++TWN +I  Y   G+    L +   M+     G E  PN +T + +
Sbjct: 376 DAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIM----GQETAPNYITLVNV 431

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             ACS  G+  EG +LF  MK  +GIEP  +HYACVVDLL RAG  E AY++I  MP   
Sbjct: 432 LTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMR- 490

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
                W +LLG C++H   E+G IAA+ LF L+P  + ++VLLSN+ +SA  W +A DVR
Sbjct: 491 PSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVR 550

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           K+MK +G++K+PG SWI + + +H F A D +H  + ++   L  L  +M+  GY+PDT 
Sbjct: 551 KEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQ 610

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
             L+++ EEEKE+ +  HSEKLA+AFG++  PPG  IR+ KNLR+C DCH+A KFIS I 
Sbjct: 611 YALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIA 670

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REII+RD   FHHFKN  CSC DYW
Sbjct: 671 GREIIVRDNNMFHHFKNYECSCKDYW 696



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 238/513 (46%), Gaps = 47/513 (9%)

Query: 2   ASSAQCLTLLPSPPLSSLQTHQPPATTA------TSLPLPGSQTRCKE--------SWIE 47
           A+ A+ L LL SP L       PP   A      + L LPG+              S+  
Sbjct: 38  AAHARALRLL-SPAL-------PPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTA 89

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL-GKQIHAHVVKY 106
            +   A+  +  +A+ ++  M R  ++P++F FP+  KA A     S  G Q+HA  +++
Sbjct: 90  FISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRF 149

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           GY      V+   ++MY K G  +    ++FD +  ++ V+WN+++      G+    +E
Sbjct: 150 GYLPDDAFVSCAALDMYFKTGC-LALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVE 208

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
           A+  +  +   P+  ++ +   AC+ ++    L LG Q +G   + G   +  + N+++ 
Sbjct: 209 AYFGLRGAGGMPNVVSVCAFFNACAGMTN---LSLGEQFYGFVAKCGFGKDVSVSNSVVD 265

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
            Y K   V  A+ +F     R+ VSW ++V + +QN    EA          G +P    
Sbjct: 266 FYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFM 325

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           ++SVL  C+ L  LD G+ +HA A+R+ I   N FV SALVDMY  C  +E   +VF  +
Sbjct: 326 VSSVLTTCAGLLGLDLGRALHAVAVRSCI-DSNIFVASALVDMYGKCGGIEDAEQVFFEM 384

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             + +  WNAMI GY        AL +F KM       PN  T+ +V+ AC R      K
Sbjct: 385 PQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGL--TK 442

Query: 406 EGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
           EG      +K   G +  +++   ++D+  R G  E +  I   M +R ++S W  ++ G
Sbjct: 443 EGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGG 502

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
              C  HG       E+  +  EK    +++LD
Sbjct: 503 ---CKMHGKT-----ELGRIAAEK----LFELD 523



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 27/349 (7%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E + +Y  +  +   P+  +  A   A AG+ +LSLG+Q +  V K G+G   V+V+N++
Sbjct: 205 ETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFG-KDVSVSNSV 263

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+ YGKC   +     VFD +  ++ VSW SM+    + G  + A   +     +  EP+
Sbjct: 264 VDFYGKCRC-VGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPT 322

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            F + SV   C+ L    GL LGR +H  ++R   + N F+ +AL+ MY K G ++DA+ 
Sbjct: 323 DFMVSSVLTTCAGLL---GLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQ 379

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLE 297
           +F     R+LV+WN ++   +       A+    +M + +   P+ +++ +VL ACS   
Sbjct: 380 VFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGG 439

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRVFDFISDK-KIALWNA 355
           +   G E+    ++    I+      A +VD+ C     E   ++   +  +  I++W A
Sbjct: 440 LTKEGYELFQ-TMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGA 498

Query: 356 MITG---YGQNEY--------------DEEALMLFIKMEEVAGLWPNAT 387
           ++ G   +G+ E               D    +L   M   AG W  AT
Sbjct: 499 LLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEAT 547


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 398/711 (55%), Gaps = 34/711 (4%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRIT 141
           +L+A    + L  GK IH  VV  G   + + +   L+N+Y  C   ++D  K VFD + 
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQ-NDIFLCKNLINLYLSC--HLYDHAKCVFDNME 65

Query: 142 EKDQVS-WNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGL 199
              ++S WN ++A   +   +  ALE F  +L Y  ++P S+T  SV  AC  L +    
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKY--- 122

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            LG+ +H   ++ G   +  + ++L+ MYAK    + A  LF    ++D+  WNT++S  
Sbjct: 123 VLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            Q+  F EA+ +   M   G +P+ V+I + + +C+ L  L+ G EIH   + +  L+D 
Sbjct: 183 YQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD- 241

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           SF+ SALVDMY  C  +E    VF+ +  K +  WN+MI+GYG        + LF +M  
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYN 301

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ P  TT+SS++  C RS    + + +HG+ I+  +  D ++ ++LMD+Y + G++E
Sbjct: 302 -EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVE 360

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           +++ IF  +     VSWN MI+GY   G+  +AL L  EM+    E              
Sbjct: 361 LAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVE-------------- 406

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              P++IT  +VL  C  L+AL KG+EIH   I   L  + VV  AL+DMYAKCG ++ A
Sbjct: 407 ---PDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA 463

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             VF  +P R++++W  +I AYG HG+    LEL   M+        +KP+ VTF+A+ +
Sbjct: 464 FSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSN-----MKPDRVTFLAILS 518

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           AC H+G+V EG   F +M + YGI P  +HY+C++DLLGRAG++ +AY+++   P   D 
Sbjct: 519 ACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDD 578

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
               S+L  ACR+H+N+++G   A+ L   +PD +S Y+LLSN+Y+SA  WD+   VR K
Sbjct: 579 VELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSK 638

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           MKE+G++K PGCSWIE   +I  F   D SH   E +   L  LS+ M  E
Sbjct: 639 MKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 254/500 (50%), Gaps = 34/500 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD++ +P+VLKA  G+    LGK IH  +VK G  +  + V ++LV MY KC +    
Sbjct: 102 LKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGL-MMDIVVGSSLVGMYAKCNAFEKA 160

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ++ +F+ + EKD   WN++I+   + G +  ALE F +M     EP+S   V++  A S+
Sbjct: 161 IW-LFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNS---VTITTAISS 216

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            +R   L  G ++H   +  G   ++FI +AL+ MY K G ++ A  +F+    + +V+W
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAW 276

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++S        +  +   ++M   G+KP   +++S++  CS    L  GK +H Y +R
Sbjct: 277 NSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  D  F+ S+L+D+Y  C +VE    +F  I   K+  WN MI+GY       EAL 
Sbjct: 337 NRIQSD-VFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALG 395

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M + + + P+A T +SV+ AC +  A    E IH   I+  L  +  V  AL+DMY
Sbjct: 396 LFSEMRK-SYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMY 454

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G ++ + ++F  +  RD VSW +MIT Y   G HG A + L     M +        
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAY---GSHGQAYVALELFAEMLQS------- 504

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALV 546
                    KP+ +T + +L  CG    + +G     Y    M+    ++      S L+
Sbjct: 505 -------NMKPDRVTFLAILSACGHAGLVDEG----CYYFNQMVNVYGIIPRVEHYSCLI 553

Query: 547 DMYAKCGCLNFARRVFDLMP 566
           D+  + G L+ A  +    P
Sbjct: 554 DLLGRAGRLHEAYEILQQNP 573



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 221/438 (50%), Gaps = 15/438 (3%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P     C   W   +    +S  F+EA+  +  M R   +P++      + + A + DL
Sbjct: 167 MPEKDVAC---WNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDL 223

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
           + G +IH  ++  G+ L S  +++ LV+MYGKCG  +    +VF+++ +K  V+WNSMI+
Sbjct: 224 NRGMEIHEELINSGFLLDSF-ISSALVDMYGKCG-HLEMAIEVFEQMPKKTVVAWNSMIS 281

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
                G     ++ F+ M    V+P+  TL S+ + CS  +R   L  G+ VHG ++R  
Sbjct: 282 GYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR---LLEGKFVHGYTIRNR 338

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + + FI ++LM +Y K G+V+ A+ +FK      +VSWN ++S      K  EA+    
Sbjct: 339 IQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFS 398

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M    ++PD ++  SVL ACS L  L+ G+EIH   +    L +N  V  AL+DMY  C
Sbjct: 399 EMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKK-LDNNEVVMGALLDMYAKC 457

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V+    VF  +  + +  W +MIT YG +     AL LF +M + + + P+  T  ++
Sbjct: 458 GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQ-SNMKPDRVTFLAI 516

Query: 393 VPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVR 450
           + AC  +    +        + + G+       + L+D+  R GR+ E  + +  + E+R
Sbjct: 517 LSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIR 576

Query: 451 DTVSWNTMITGYTICGQH 468
           D V    + T ++ C  H
Sbjct: 577 DDVE--LLSTLFSACRLH 592



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 38/286 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       +  EA+  + EM +S ++PD   F +VL A + +  L  G++IH  +
Sbjct: 376 SWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLI 435

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++     + V V   L++MY KCG+ + + + VF  + ++D VSW SMI      G+  +
Sbjct: 436 IEKKLDNNEV-VMGALLDMYAKCGA-VDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYV 493

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE F  ML SN++P   T +++  AC                G++  V E   +  N +
Sbjct: 494 ALELFAEMLQSNMKPDRVTFLAILSAC----------------GHAGLVDE-GCYYFNQM 536

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + +Y  + RV+                ++ ++  L +  +  EA   L+Q     I+ D 
Sbjct: 537 VNVYGIIPRVEH---------------YSCLIDLLGRAGRLHEAYEILQQNP--EIRDDV 579

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             ++++  AC     +D G EI    +  D   D+S     L +MY
Sbjct: 580 ELLSTLFSACRLHRNIDLGAEIARTLIDKD--PDDSSTYILLSNMY 623



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 37/253 (14%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L+ +L  C    +L +GK IH   +   L  D+ +   L+++Y  C   + A+ VFD M 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 567 VRNVIT-WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS---- 621
               I+ WN ++  Y  +    E LEL + ++        +KP+  T+ ++  AC     
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLL----HYPYLKPDSYTYPSVLKACGGLYK 121

Query: 622 -------HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
                  H+ +V  G+ +      D  +  S      +V +  +    E A  L N MP 
Sbjct: 122 YVLGKMIHTCLVKTGLMM------DIVVGSS------LVGMYAKCNAFEKAIWLFNEMPE 169

Query: 675 EFDKAGAWSSLLGACRIHQNVE--IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD-- 730
           +      W++++       N +  +        F  EP+  +   + + I S A+L D  
Sbjct: 170 K--DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVT---ITTAISSCARLLDLN 224

Query: 731 KAMDVRKKMKEMG 743
           + M++ +++   G
Sbjct: 225 RGMEIHEELINSG 237


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 412/741 (55%), Gaps = 38/741 (5%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           + +  F + +L+Y  M  +D  PD   FP+++KA   +   S G   H  V+  GY  S 
Sbjct: 24  STAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYS-SD 82

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
             +A +L+N Y K G +     KVFD + +++ V W +MI    R G+ D+A   + +M 
Sbjct: 83  SYIATSLINFYSKFGHNQ-SARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMR 141

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              ++PSS T++ +      L     L      H   ++ G   +  + N+++ +Y K G
Sbjct: 142 RQGIQPSSVTMLGLLSGVLELVHLQCL------HACVIQYGFGSDVALANSMLNVYCKCG 195

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
           RV+DA+ LF+  + RD++SWN++VS  +Q     E +  L +M   GI+PD  +  S++ 
Sbjct: 196 RVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVS 255

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           A +    L  GK +H + LR   L  +S + ++L+ MY  C  V    R+F+ +  K + 
Sbjct: 256 AAAMQSKLGVGKMVHGHILRAG-LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVI 314

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W AMI+G  QN+  + A+ +F +M + + + P+  T++SV+ AC    +FP    +HG+
Sbjct: 315 SWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSVHGY 373

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            ++  +  D   QN+L+ MY++ G +E S ++FD M  RD VSWN +++G+   G    A
Sbjct: 374 ILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKA 433

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L+L  EM+                   R +P+SIT++++L  C ++ AL +GK IH +  
Sbjct: 434 LLLFNEMRKA-----------------RQRPDSITVVSLLQACASIGALHQGKWIHNFVT 476

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++ L   +++ +ALVDMY+KCG L  A++ FD MP +++++W+ II  YG HG+G+  L 
Sbjct: 477 KSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALR 536

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           +  + +  G     ++PN V ++++ +ACSH+G+V +G+  F+ M  D+GIEP  +H AC
Sbjct: 537 MYSDFLHTG-----IQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591

Query: 652 VVDLLGRAGKVEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           +VDLL RAG+VE+AY     M   P  D  G    LL ACR   NVE+G+I A+ + +L+
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGI---LLDACRTTGNVELGDIVAREIVILK 648

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
           P  A +YV L++ Y+S + WD   +V  +MK + ++K PG S+IE    I  F     SH
Sbjct: 649 PANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSH 708

Query: 770 QQSEQLHGFLENLSERMRKEG 790
            Q E++   L+ L   MRK G
Sbjct: 709 PQFEEIMLVLKILGSEMRKVG 729



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 214/411 (52%), Gaps = 19/411 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+    RE +   I M    I+PD   F +++ A A    L +GK +H H+
Sbjct: 214 SWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHI 273

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G    S  +  +L+ MY KCG ++   +++F+ +  KD +SW +MI+ L +    D+
Sbjct: 274 LRAGLEQDS-HIETSLIGMYLKCG-NVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  FR ML S V PS+ T+ SV  AC+ L       LG  VHG  LR   + +    N+
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELG---SFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G ++ + ++F     RD+VSWN IVS  +QN    +A++   +M     +PD
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRN----DILIDNSFVGSALVDMYCNCREVECG 338
            +++ S+L AC+ +  L  GK IH +  ++     ILID     +ALVDMY  C ++   
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID-----TALVDMYSKCGDLGSA 503

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           ++ FD +  + +  W+++I GYG +   E AL ++       G+ PN     S++ AC  
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLH-TGIQPNHVIYLSILSACSH 562

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           +    D+     H++    G +  +++   ++D+ SR GR+E + + +  M
Sbjct: 563 N-GLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM 612



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 201/433 (46%), Gaps = 32/433 (7%)

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           SF +    S+N I++ LS    F + ++    M      PD  +  S++ AC+ L++   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G   H   +  D    +S++ ++L++ Y      +  R+VFD + D+ +  W  MI  Y 
Sbjct: 67  GLSFHQRVIV-DGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYT 125

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +    + A  ++  M    G+ P++ TM  ++   +        + +H   I+ G G D 
Sbjct: 126 RAGEHDVAFSMYNIMRR-QGIQPSSVTMLGLLSGVLE---LVHLQCLHACVIQYGFGSDV 181

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + N+++++Y + GR+E ++ +F+ M+ RD +SWN++++GY   G   + L LL  M+  
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
             E                 P+  T  +++      S L  GK +H + +R  L  D  +
Sbjct: 242 GIE-----------------PDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++L+ MY KCG +N A R+F+ M  ++VI+W  +I     +      + + + M+    
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKS-- 342

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIE-PSPDHYACVVDLLGRA 659
               V P+  T  ++ AAC+  G    G  +  Y ++    ++ PS +    +V +  + 
Sbjct: 343 ---RVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN---SLVTMYAKC 396

Query: 660 GKVEDAYQLINMM 672
           G +E +  + + M
Sbjct: 397 GHLEQSCSVFDRM 409


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 350/611 (57%), Gaps = 29/611 (4%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL----VDMYCNCREVECGRRVFDFI 345
           L  CS L  L   K IHAY +R  I+ D  F  S L    VD       ++   R+F  I
Sbjct: 24  LETCSDLTHL---KIIHAYMIRTHIICD-VFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            +  + ++NAMI G+  ++  ++A   +++ +   GL P+  T   +V +C +       
Sbjct: 80  QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQR-QGLLPDNLTFPFLVKSCTKLHCISMG 138

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
              HGH IK G  +D YVQN+L+ MY+  G  E +  IF  M   D VSW +MI G+  C
Sbjct: 139 SQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198

Query: 466 GQHGDALMLLREM--------QNMEEEKNRNNVYDLDETVLRP------KPNSITLMTVL 511
           G    A  L  +M          M     +NN +D    + +       + N   +++V+
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L AL  G+  H Y ++N +  ++++G+ALVDMYA+CG ++ A  VF+ +P R+ +
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTL 318

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W  +I    MHG  +  L+    MV  G     + P ++TF A+ +ACSH G+V  G  
Sbjct: 319 SWTALIAGLAMHGYSERSLKYFATMVEAG-----LTPRDITFTAVLSACSHGGLVERGFQ 373

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
           +F  MK D+ +EP  +HY C+VDLLGRAGK+E+A + +  MP +   A  W +LLGACRI
Sbjct: 374 IFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK-PNAPVWGALLGACRI 432

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N EIGE   + L  L P  + +YVLLSNIY++A+ W+K  ++R+ MK  G++K PG S
Sbjct: 433 HKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHS 492

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            IE    +HKF  GD SH + +++    E +  R+R  GY  +T+  L +++EEEKE+ L
Sbjct: 493 LIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESAL 552

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLAIAFG++ +  GT IR+ KNLRVC DCH ATK ISK+  RE+I+RD  RFHHF
Sbjct: 553 HRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHF 612

Query: 872 KNGTCSCGDYW 882
           + G CSC DYW
Sbjct: 613 RQGLCSCMDYW 623



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 115/494 (23%), Positives = 212/494 (42%), Gaps = 70/494 (14%)

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D A  +F   ++ +L  +N ++   S +    +A  F  Q   +G+ PD ++   ++ +
Sbjct: 69  IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKS 128

Query: 293 CSHLEMLDTGKEIHAYALRN----DILIDNSFVG-------------------------- 322
           C+ L  +  G + H + +++    D+ + NS V                           
Sbjct: 129 CTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           ++++  +  C +VE  R++FD + +K +  W+ MI+GY QN + ++A+ LF K+ +  G+
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELF-KVLQSQGV 247

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
             N T M SV+ +C    A    E  H + +K G+  +  +  AL+DMY+R G I+ +  
Sbjct: 248 RANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVW 307

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F+D+  RDT+SW  +I G  +   HG +   L+    M E                  P
Sbjct: 308 VFEDLPERDTLSWTALIAGLAM---HGYSERSLKYFATMVEAG--------------LTP 350

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRV 561
             IT   VL  C     + +G +I     R+  +   +     +VD+  + G L  A R 
Sbjct: 351 RDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF 410

Query: 562 FDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
              MPV+ N   W  ++ A  +H     G+ V ++L  ++          P    +  L 
Sbjct: 411 VLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLL----------PQHSGYYVLL 460

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +    +    E +    +M    G++  P H   +++L GR  K    + + +   PE D
Sbjct: 461 SNIYANAKEWEKVTEMRQMMKAKGLKKPPGH--SLIELDGRVHK----FTIGDSSHPEMD 514

Query: 678 K-AGAWSSLLGACR 690
           K    W  +L   R
Sbjct: 515 KIERMWEEILMRIR 528



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 37/289 (12%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  + S    +A   Y++  R  + PDN  FP ++K+   +  +S+G Q H H++K+G+
Sbjct: 91  IRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGF 150

Query: 109 GLSSVTVANTLVNMYG-------------------------------KCGSDMWDVYKVF 137
               V V N+LV+MY                                KCG D+    K+F
Sbjct: 151 E-KDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG-DVESARKLF 208

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           D++ EK+ V+W++MI+   +   +D A+E F+++    V  +   +VSV  +C++L    
Sbjct: 209 DQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLG--- 265

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L LG + H   ++ G   N  +  AL+ MYA+ G +D A  +F+   +RD +SW  +++
Sbjct: 266 ALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIA 325

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            L+ +     ++ +   M   G+ P  ++  +VL ACSH  +++ G +I
Sbjct: 326 GLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQI 374



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 192/422 (45%), Gaps = 56/422 (13%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY--GKCGSDMWD-VYKVFDRITEKDQVSW 148
           DL+  K IHA++++  + +  V  A+ L+        G+ + D   ++F +I   +   +
Sbjct: 29  DLTHLKIIHAYMIR-THIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIF 87

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N+MI         D A   +       + P + T   +  +C+ L     + +G Q HG+
Sbjct: 88  NAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLH---CISMGSQAHGH 144

Query: 209 SLRVG-EWNTFIMNALMAMYA-------------------------------KLGRVDDA 236
            ++ G E + ++ N+L+ MYA                               K G V+ A
Sbjct: 145 IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESA 204

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF    +++LV+W+T++S  +QN+ F +AV   + +  +G++ +   + SV+ +C+HL
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L+ G+  H Y ++N + + N  +G+ALVDMY  C  ++    VF+ + ++    W A+
Sbjct: 265 GALELGERAHDYVVKNGMTL-NLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTAL 323

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I G   + Y E +L  F  M E AGL P   T ++V+ AC             G  I   
Sbjct: 324 IAGLAMHGYSERSLKYFATMVE-AGLTPRDITFTAVLSACSHGGLVE-----RGFQIFES 377

Query: 417 LGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHG 469
           + RD  V+        ++D+  R G++E ++     M V+     W  ++     C  H 
Sbjct: 378 MKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGA---CRIHK 434

Query: 470 DA 471
           +A
Sbjct: 435 NA 436



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 51/299 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++N F +A+  +  +    ++ +     +V+ + A +  L LG++ H +V
Sbjct: 218 TWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYV 277

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  L ++ +   LV+MY +CGS    V+ VF+ + E+D +SW ++IA L   G  + 
Sbjct: 278 VKNGMTL-NLILGTALVDMYARCGSIDKAVW-VFEDLPERDTLSWTALIAGLAMHGYSER 335

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           +L+ F  M+ + + P   T  +V  ACS              HG                
Sbjct: 336 SLKYFATMVEAGLTPRDITFTAVLSACS--------------HG---------------- 365

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRD------LVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                  G V+    +F+S + RD      L  +  +V  L +  K  EA  F+ +M   
Sbjct: 366 -------GLVERGFQIFESMK-RDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP-- 415

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            +KP+     ++L AC   +  + G+ +    ++  +L  +S     L ++Y N +E E
Sbjct: 416 -VKPNAPVWGALLGACRIHKNAEIGERVGKILIQ--LLPQHSGYYVLLSNIYANAKEWE 471


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 346/596 (58%), Gaps = 69/596 (11%)

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           R+++  R++F  +       +N +I    ++    +AL++FI+M E   + PN  T  SV
Sbjct: 59  RDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSV 118

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYV----------------------------- 423
             AC R+E   +   +HG A+K GL  D +V                             
Sbjct: 119 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 178

Query: 424 -----------------QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
                             N ++D Y R+G +E+++ +FD+M  R  VSWN MI GY   G
Sbjct: 179 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 238

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +A+ + REMQ  E                   PN +TL++VLP    L AL  GK +
Sbjct: 239 HFKEAVEVFREMQMAE-----------------VPPNYVTLVSVLPAMSRLGALELGKWV 281

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H YA+RN +  D V+GSAL+DMYAKCG +  A +VF+ +P RNV+TW+ II    MHG  
Sbjct: 282 HLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRA 341

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           ++ L+  ++M   G     V P++VT+I L +ACSH+G+V+EG   F  M    G+EP  
Sbjct: 342 KDTLDHFEDMERAG-----VMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRI 396

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C+VDLLGRAG +E++ +LI  MP + D    W +LLGAC++H NVE+G+  A++L 
Sbjct: 397 EHYGCMVDLLGRAGLLEESEELILNMPIKPDDV-IWKALLGACKMHGNVEMGKRVAEHLM 455

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            L P  +  YV LSNIY+S   W+    VR  MKEM VRK+PGCSWIE    IH+FL  D
Sbjct: 456 ELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVED 515

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH +S+++H  L+ +S  +   GY P+T+ VL N++EE+KE+ L  HSEK+AIAFG+++
Sbjct: 516 DSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLIS 575

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T P T +R+ KNLR+C DCH + K ISKI  R+II+RD +RFHHF NG+CSC DYW
Sbjct: 576 TQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 211/470 (44%), Gaps = 66/470 (14%)

Query: 64  SYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           S I  + + + P +  FP        +QDL   KQ+HA ++K       +  A  L    
Sbjct: 3   STIFTSTTSLWPPSSFFPC-----KTMQDL---KQLHAQMIKTAQIRDPLAAAELLRFSA 54

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFT 182
                D+    K+F  +   +  S+N++I  L        AL  F  M+   +VEP+ FT
Sbjct: 55  VSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFT 114

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG----------------------------- 213
             SV  AC    R   LR GRQVHG +++ G                             
Sbjct: 115 FPSVFKACGRAER---LREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFY 171

Query: 214 ------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
                             + +  + N ++  Y ++G ++ A+ LF     R +VSWN ++
Sbjct: 172 RRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMI 231

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           +  +Q+  F EAV   R+M +  + P+ V++ SVLPA S L  L+ GK +H YA+RN+I 
Sbjct: 232 AGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIG 291

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           +D+  +GSAL+DMY  C  +E   +VF+ +  + +  W+ +I G   +   ++ L  F  
Sbjct: 292 VDD-VLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFED 350

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRM 434
           ME  AG+ P+  T   ++ AC  +    +      H +++ GL         ++D+  R 
Sbjct: 351 MER-AGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRA 409

Query: 435 GRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           G +E S+ +  +M ++ D V W  ++     C  HG+  M  R  +++ E
Sbjct: 410 GLLEESEELILNMPIKPDDVIWKALLGA---CKMHGNVEMGKRVAEHLME 456



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 208/454 (45%), Gaps = 74/454 (16%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYAKLGR---VDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H   ++  +    +  A +  ++ +     +D A+ +F+S    +  S+NT++ +LS
Sbjct: 28  KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 87

Query: 260 QNDKFLEAVM-FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +++   +A++ F+  +    ++P+  +  SV  AC   E L  G+++H  A++   L  +
Sbjct: 88  ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG-LDSD 146

Query: 319 SFVGSALVDMYCNC---------------------------------------------- 332
            FV S +V MY +C                                              
Sbjct: 147 EFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRI 206

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            E+E  R +FD +  + +  WN MI GY Q+ + +EA+ +F +M ++A + PN  T+ SV
Sbjct: 207 GELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREM-QMAEVPPNYVTLVSV 265

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PA  R  A    + +H +A++  +G D  + +AL+DMY++ G IE +  +F+ +  R+ 
Sbjct: 266 LPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNV 325

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V+W+T+I G  + G+  D L    +M+       R  V           P+ +T + +L 
Sbjct: 326 VTWSTIIAGLAMHGRAKDTLDHFEDME-------RAGVM----------PSDVTYIGLLS 368

Query: 513 GCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NV 570
            C     + +G+    + +R + L   +     +VD+  + G L  +  +   MP++ + 
Sbjct: 369 ACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDD 428

Query: 571 ITWNVIIMAYGMHGE---GQEVLELLKNMVAEGS 601
           + W  ++ A  MHG    G+ V E L  +    S
Sbjct: 429 VIWKALLGACKMHGNVEMGKRVAEHLMELAPHDS 462



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 149/311 (47%), Gaps = 53/311 (17%)

Query: 49  LRSEARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +R+ + SN   +A+L +IEM     ++P+ F FP+V KA    + L  G+Q+H   VK+G
Sbjct: 83  IRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG 142

Query: 108 YGLSSVTVANTLVNMYGKCG-------------------------------SDMWDVY-- 134
                  V+N +V MY  CG                                 +W+V   
Sbjct: 143 LDSDEFVVSN-VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 201

Query: 135 ------------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
                        +FD + ++  VSWN MIA   + G +  A+E FR M  + V P+  T
Sbjct: 202 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVT 261

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLF 240
           LVSV  A   +SR   L LG+ VH  ++R  +G  +  + +AL+ MYAK G ++ A  +F
Sbjct: 262 LVSVLPA---MSRLGALELGKWVHLYAVRNNIGV-DDVLGSALIDMYAKCGSIEKALQVF 317

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +    R++V+W+TI++ L+ + +  + +     M   G+ P  V+   +L ACSH  +++
Sbjct: 318 EGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377

Query: 301 TGKEIHAYALR 311
            G+    + +R
Sbjct: 378 EGRWFFDHMVR 388



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+S  F+EA+  + EM  +++ P+     +VL A++ +  L LGK +H + 
Sbjct: 226 SWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYA 285

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+   G+  V + + L++MY KCGS +    +VF+ + +++ V+W+++IA L   G+   
Sbjct: 286 VRNNIGVDDV-LGSALIDMYAKCGS-IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKD 343

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            L+ F  M  + V PS  T + +  ACS+
Sbjct: 344 TLDHFEDMERAGVMPSDVTYIGLLSACSH 372


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 389/703 (55%), Gaps = 31/703 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALM--AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q+H   LR  +  + +  + L   A ++    +D A+ +F      +L SWN ++ +L+
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 260 QNDKFLEAVM-FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            +   +++V+ F+R +      P+  +   ++ A +       GK +H  A++     D+
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTS-FGDD 274

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            FV ++L+  Y +C  ++    VF+ I  ++K I  WN+M+TG+ Q  Y ++AL LF +M
Sbjct: 275 VFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERM 334

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               G+ PNA TM SV+ AC ++        +  +  +  +  +  V NA +DM+ + G 
Sbjct: 335 RN-EGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME-----------EEK 485
           +EI++ +FD+ME RD VSW T+I GY    +HG A  +   M   +           E+ 
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453

Query: 486 NRNN-----VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
            R         +L  T    +P+ +TL++ L  C  L A+  G+ IH Y  +  +  +  
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           + ++L+DMY+K G +  A  VF  +  ++V  W+ +I    MHG G+  +EL  +M    
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDM---- 569

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
            +  +VKPN VTF  L  ACSHSG+V EG  LF +M+  YG+ P   HY+C+VD+LGRAG
Sbjct: 570 -QETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAG 628

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            +E+A + I  MP     A  W +LLGAC IH N+E+ E A   L  +EP     YVLLS
Sbjct: 629 HLEEALKFIEGMPLA-PSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLS 687

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N+Y+    W+   ++R++M++ G++KE GCS IE    +H+F+ GD +H  S  ++  L+
Sbjct: 688 NLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLD 747

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
            +  R+R  GYV +T C+L  V EEE KE  L  HSEK+AIAFG++       IR+ KNL
Sbjct: 748 EIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNL 807

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH   K +SK+  R+I+LRD  RFHHF  G CSC DYW
Sbjct: 808 RVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 230/476 (48%), Gaps = 69/476 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +R+ A S+   +++L +I M   S   P+ F FP ++KAVA  +   +GK +H  
Sbjct: 206 SWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGM 265

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRI--TEKDQVSWNSMIATLCRFG 159
            +K  +G   V V N+L++ Y  CG  D+   Y VF+ I    KD VSWNSM+    + G
Sbjct: 266 AIKTSFG-DDVFVLNSLIHFYASCGHLDL--AYLVFEMIEGNNKDIVSWNSMVTGFVQGG 322

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQV----HGNSLRVGEW 215
             D AL+ F  M    V P++ T+VSV  AC   ++   L LGR+V      N + +   
Sbjct: 323 YPDKALDLFERMRNEGVHPNAVTMVSVMSAC---AKTMNLTLGRKVCDYIDRNEMMM--- 376

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI--------------------- 254
           N  + NA + M+ K G V+ A+ LF + E RD+VSW TI                     
Sbjct: 377 NLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMP 436

Query: 255 ----------VSSLSQNDKFLEAVMFLRQMAL--RGIKPDGVSIASVLPACSHLEMLDTG 302
                     +S   Q+ +  EA+   R++ L   G +PD V++ S L AC+ L  +D G
Sbjct: 437 RKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG 496

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           + IH Y  +  I + N  + ++L+DMY    +VE    VF  I +K + +W+AMI G   
Sbjct: 497 EWIHGYIKKERIQL-NRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAM 555

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKL 415
           +   E A+ LF+ M+E   + PN+ T ++++ AC  S         F + E ++G   K 
Sbjct: 556 HGRGEAAIELFLDMQETQ-VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKT 614

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
                 Y  + ++D+  R G +E +    + M +  + S W  ++     C  HG+
Sbjct: 615 ----KHY--SCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGA---CCIHGN 661



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 169/679 (24%), Positives = 299/679 (44%), Gaps = 91/679 (13%)

Query: 5   AQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS 64
            QCLT+  +  + +       +T   ++       + KE WI         N    +I+ 
Sbjct: 76  GQCLTVKGAEDVLNKPFAFELSTNNDTMYFIADSEKEKEEWI---------NSIGRSIVQ 126

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-----YGLSSVTVANTL 119
           +   T +     N    A+ +     + L   KQIHA +++       Y  S +  A   
Sbjct: 127 HSSPTPASATATNVGDRALFQQCTSFKQL---KQIHAQMLRTNKLHDPYAASELFTAAAF 183

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEP 178
            +      S +    KVFD+I + +  SWN +I  L        ++  F RM+  S   P
Sbjct: 184 SSF-----SALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGP 238

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDA 236
           + FT   +  A   ++ R    +G+ VHG +++   G+ + F++N+L+  YA  G +D A
Sbjct: 239 NKFTFPVLIKA---VAERRCFLVGKAVHGMAIKTSFGD-DVFVLNSLIHFYASCGHLDLA 294

Query: 237 KTLFKSFE--DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
             +F+  E  ++D+VSWN++V+   Q     +A+    +M   G+ P+ V++ SV+ AC+
Sbjct: 295 YLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACA 354

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE------------------ 336
               L  G+++  Y  RN++++ N  V +A +DM+  C EVE                  
Sbjct: 355 KTMNLTLGRKVCDYIDRNEMMM-NLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWT 413

Query: 337 -------------CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-AGL 382
                          R +FD +  K I  WN +I+GY Q+   +EAL +F +++   +G 
Sbjct: 414 TIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGA 473

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            P+  T+ S + AC +  A    E IHG+  K  +  +R +  +L+DMYS+ G +E +  
Sbjct: 474 RPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIE 533

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F  +  +D   W+ MI G  + G+   A+ L  +MQ  +                  KP
Sbjct: 534 VFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ-----------------VKP 576

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRV 561
           NS+T   +L  C     + +GK +     R   +       S +VD+  + G L  A + 
Sbjct: 577 NSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF 636

Query: 562 FDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAA 619
            + MP+  +   W  ++ A  +HG     LEL +      SR  E++P N   ++ L   
Sbjct: 637 IEGMPLAPSASVWGALLGACCIHGN----LELAEKAC---SRLLEIEPGNHGAYVLLSNL 689

Query: 620 CSHSGMVSEGMDLFYKMKD 638
            + +G      +L  +M+D
Sbjct: 690 YAKTGDWEGVSELRQQMRD 708


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/688 (37%), Positives = 384/688 (55%), Gaps = 79/688 (11%)

Query: 202 GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSL 258
           G   H + L++G   + F+ NA++ MYA+LG +  A+ +F    D  R +  WN +VS  
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            + +   +A      M  R                                        N
Sbjct: 174 WKWESEGQAQWLFDVMPER----------------------------------------N 193

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
               +A+V  Y   +++E  RR FD + ++ +  WNAM++GY QN   EEAL LF +M  
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253

Query: 379 VAGLWPNATTMSSVVPACVRSE----AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            AG+ P+ TT  +V+ AC        A      +H   I+L      +V+ AL+DMY++ 
Sbjct: 254 -AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNC----FVRTALLDMYAKF 308

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G ++ ++ +F+ M  R+ V+WN+MI GY   GQ   A+ L +EM                
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI--------------- 353

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            T  +  P+ +T+++V+  CG L AL  G  +  +   N +   +   +A++ MY++CG 
Sbjct: 354 -TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGS 412

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A+RVF  M  R+V+++N +I  +  HG G E + L+  M     + G ++P+ VTFI
Sbjct: 413 MEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM-----KEGGIEPDRVTFI 467

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            +  ACSH+G++ EG  +F  +KD     P+ DHYAC+VDLLGR G++EDA + +  MP 
Sbjct: 468 GVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPM 522

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E   AG + SLL A RIH+ VE+GE+AA  LF LEPD + +++LLSNIY+SA  W     
Sbjct: 523 E-PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVER 581

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R+ MK+ GV+K  G SW+E+G ++HKF+  D SH++S+ ++  L  L ++MR+ GY+ D
Sbjct: 582 IREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIAD 641

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            SCVL +V EEEKE ++  HSEKLAI + +L +  G  IRV KNLRVC DCH A K ISK
Sbjct: 642 KSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISK 701

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +E R II+RD  RFH F +G CSC DYW
Sbjct: 702 LEGRVIIVRDNNRFHCFNDGLCSCKDYW 729



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 239/538 (44%), Gaps = 106/538 (19%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR  +      + +L Y +M    ++PD F +P ++K+       + G   HAHV+K G+
Sbjct: 72  LRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGH 126

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKWDLALE 166
           G S   V N +++MY + G  +    KVFD I   E+    WN+M++     G W    E
Sbjct: 127 G-SDAFVRNAVIDMYARLGP-IGHARKVFDEIPDYERKVADWNAMVS-----GYWKWESE 179

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
                L+ +V P                                   E N     A++  
Sbjct: 180 GQAQWLF-DVMP-----------------------------------ERNVITWTAMVTG 203

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK+  ++ A+  F    +R +VSWN ++S  +QN    EA+    +M   GI+PD  + 
Sbjct: 204 YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTW 263

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDI----LIDNSFVGSALVDMYCNCREVECGRRVF 342
            +V+ ACS       G    A +L   +    +  N FV +AL+DMY    +++  R++F
Sbjct: 264 VTVISACS-----SRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLF 318

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  + +  WN+MI GY QN     A+ LF +M     L P+  TM SV+ AC      
Sbjct: 319 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC------ 372

Query: 403 PDKEGIHGH--AIKLGLGRDRYV-----------QNALMDMYSRMGRIEISKTIFDDMEV 449
                  GH  A++LG    R++            NA++ MYSR G +E +K +F +M  
Sbjct: 373 -------GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT 425

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD VS+NT+I+G+   G   +A+ L+  M+    E                 P+ +T + 
Sbjct: 426 RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE-----------------PDRVTFIG 468

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           VL  C     L +G+++      ++    +   + +VD+  + G L  A+R  + MP+
Sbjct: 469 VLTACSHAGLLEEGRKV----FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPM 522



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 68/437 (15%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV--ECGRRVF 342
           SIAS +   +HL      +++HA  + N +   N +V  AL+  +C            +F
Sbjct: 6   SIASRVGNFNHL------RQLHAQIIHNSLHHHNYWV--ALLINHCTRLRAPPHYTHLLF 57

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +   +  + ++ +M+  Y   +   + ++++ +M+   G+ P+A     V P  ++S A 
Sbjct: 58  NSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQG-CGVRPDAF----VYPILIKS-AG 111

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME--VRDTVSWNTMIT 460
               G H H +KLG G D +V+NA++DMY+R+G I  ++ +FD++    R    WN M++
Sbjct: 112 TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS 171

Query: 461 GYTICGQHGDALMLLREM---------------QNMEEEKNRNNVYD------------- 492
           GY      G A  L   M                 +++ +     +D             
Sbjct: 172 GYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAM 231

Query: 493 --------LDETVLR---------PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
                   L E  LR          +P+  T +TV+  C +         +     +  +
Sbjct: 232 LSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRI 291

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             +  V +AL+DMYAK G L+ AR++F+ MP RNV+TWN +I  Y  +G+    +EL K 
Sbjct: 292 QLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 351

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M+       ++ P+EVT +++ +AC H G +  G +   +   +  I+ S   +  ++ +
Sbjct: 352 MIT----AKKLTPDEVTMVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNAMIFM 406

Query: 656 LGRAGKVEDAYQLINMM 672
             R G +EDA ++   M
Sbjct: 407 YSRCGSMEDAKRVFQEM 423



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 160/314 (50%), Gaps = 28/314 (8%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD----LSL 95
           R   SW   L   A++    EA+  + EM  + I+PD   +  V+ A +   D     SL
Sbjct: 223 RSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            + +H   ++      +  V   L++MY K G D+    K+F+ +  ++ V+WNSMIA  
Sbjct: 283 VRTLHQKRIQL-----NCFVRTALLDMYAKFG-DLDSARKLFNTMPGRNVVTWNSMIAGY 336

Query: 156 CRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
            + G+  +A+E F+ M+ +  + P   T+VSV  AC +L     L LG  V    +R   
Sbjct: 337 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG---ALELGNWV----VRFLT 389

Query: 215 WNTFIM-----NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
            N   +     NA++ MY++ G ++DAK +F+    RD+VS+NT++S  + +   +EA+ 
Sbjct: 390 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 449

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            +  M   GI+PD V+   VL ACSH  +L+ G+++  +    D  ID+    + +VD+ 
Sbjct: 450 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV--FESIKDPAIDHY---ACMVDLL 504

Query: 330 CNCREVECGRRVFD 343
               E+E  +R  +
Sbjct: 505 GRVGELEDAKRTME 518


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/665 (37%), Positives = 371/665 (55%), Gaps = 26/665 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+ N+++ MY K G + DA+ +F    +R+LVSWNTI+S+ ++N  F +       M   
Sbjct: 46  FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
             KP+G +    L +  +   L+ GK+IH++A+R+  L  N+ V +A+ +MY  C  +E 
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSG-LGSNASVNTAISNMYVKCGWLEG 164

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
              VF+ +S+K    W  ++ GY Q E   +AL LF KM    G+  +    S V+ AC 
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVN-EGVELDEYVFSIVLKACA 223

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
             E       IHGH +KLGL  +  V   L+D Y +   +E +   F+ +   + VSW+ 
Sbjct: 224 GLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSA 283

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +ITGY   G+  +AL     +        R    D+         NS T  ++   C AL
Sbjct: 284 LITGYCQMGEFEEALKTFESL--------RTRSVDI---------NSFTYTSIFQACSAL 326

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           +    G + HA AI++ L       SA++ MY++CG L++A RVF+ +   + + W  II
Sbjct: 327 ADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAII 386

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             Y   G   E L+L + M   G     V+PN VTFIA+  ACSHSG+V EG      M 
Sbjct: 387 AGYAYQGNAPEALKLFRRMQDCG-----VRPNAVTFIAVLTACSHSGLVIEGRQYLESMS 441

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
            +YG+  + DHY C+VD+  RAG +++A +LI  MP   D A +W  LLG C  ++N+EI
Sbjct: 442 SNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPD-AMSWKCLLGGCWTYRNLEI 500

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GE+AA+NLF L+P+  + Y+L+ N+Y+S   W +A +VRK M E  +RKE  CSWI    
Sbjct: 501 GELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKG 560

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           ++H+F+ GD  H Q+E+++  LE L++ + KE     T   + N   E KE LL  HSE+
Sbjct: 561 KVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLV-HSER 619

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+AFG+++TP    + V KNLR C DCH   K +S I  REI++RD  RFHHFK G CS
Sbjct: 620 LALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECS 679

Query: 878 CGDYW 882
           C DYW
Sbjct: 680 CNDYW 684



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 253/502 (50%), Gaps = 27/502 (5%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           ++  + +A   I+ L  G+  H  + +         + N+++ MY KCGS + D  KVFD
Sbjct: 12  SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEF-LENSVLKMYCKCGS-LADARKVFD 69

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + E++ VSWN++I+     G +D     F  ML    +P+  T +    +  N S   G
Sbjct: 70  EMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPS---G 126

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L +G+Q+H +++R G   N  +  A+  MY K G ++ A+ +F+   +++ V+W  I+  
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +Q ++ ++A+    +M   G++ D    + VL AC+ LE L+ G++IH + ++  +  +
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
            S VG+ LVD Y  C  +E   + F++IS+     W+A+ITGY Q    EEAL  F  + 
Sbjct: 247 VS-VGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESL- 304

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
               +  N+ T +S+  AC     F      H  AIK  L   ++ ++A++ MYSR GR+
Sbjct: 305 RTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRL 364

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + +  +F+ ++  D V+W  +I GY   G   +AL L R MQ+                 
Sbjct: 365 DYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD----------------- 407

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
              +PN++T + VL  C     + +G++ + + +    +AT +     +VD+Y++ G L 
Sbjct: 408 CGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQ 467

Query: 557 FARRVFDLMPVR-NVITWNVII 577
            A  +   MP   + ++W  ++
Sbjct: 468 EALELIRSMPFSPDAMSWKCLL 489



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 204/423 (48%), Gaps = 14/423 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A +  F +    +  M   + +P+   +   L+++     L +GKQIH+H 
Sbjct: 78  SWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHA 137

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMW--DVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++ G G S+ +V   + NMY KCG   W      VF++++EK+ V+W  ++    +  + 
Sbjct: 138 IRSGLG-SNASVNTAISNMYVKCG---WLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQ 193

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
             AL  F  M+   VE   +    V  AC+ L   + L  GRQ+HG+ +++G E    + 
Sbjct: 194 MDALALFAKMVNEGVELDEYVFSIVLKACAGL---EELNFGRQIHGHIVKLGLESEVSVG 250

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
             L+  Y K   ++ A   F+   + + VSW+ +++   Q  +F EA+     +  R + 
Sbjct: 251 TPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVD 310

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            +  +  S+  ACS L   ++G + HA A+++  L+      SA++ MY  C  ++   R
Sbjct: 311 INSFTYTSIFQACSALADFNSGAQAHADAIKSS-LVAYQHGESAMITMYSRCGRLDYATR 369

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF+ I D     W A+I GY       EAL LF +M++  G+ PNA T  +V+ AC  S 
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD-CGVRPNAVTFIAVLTACSHSG 428

Query: 401 -AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTM 458
                ++ +   +   G+       + ++D+YSR G ++ +  +   M    D +SW  +
Sbjct: 429 LVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCL 488

Query: 459 ITG 461
           + G
Sbjct: 489 LGG 491



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 26/315 (8%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E AG+  +  +   +  AC + ++  D    H    +       +++N+++ MY + G +
Sbjct: 2   EDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSL 61

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++ +FD+M  R+ VSWNT+I+ Y   G       +   M  +E               
Sbjct: 62  ADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELE--------------- 106

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KPN  T +  L      S L  GK+IH++AIR+ L ++  V +A+ +MY KCG L  
Sbjct: 107 --TKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEG 164

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  VF+ M  +N + W  I++ Y       + L L   MV EG     V+ +E  F  + 
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEG-----VELDEYVFSIVL 219

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC+    ++ G  +   +    G+E        +VD   +   +E A +    +    D
Sbjct: 220 KACAGLEELNFGRQIHGHIV-KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND 278

Query: 678 KAGAWSSLL-GACRI 691
              +WS+L+ G C++
Sbjct: 279 V--SWSALITGYCQM 291


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/635 (38%), Positives = 356/635 (56%), Gaps = 60/635 (9%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           + T K +H+    N    +N  +G  L+  Y    E    R VFD I ++ +  +N MI 
Sbjct: 48  IKTLKNVHSKVF-NLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIR 106

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y  N   ++AL++F  M    G  P+  T   V+ AC  S+       +HG   K+GL 
Sbjct: 107 SYMNNHLYDDALLVFRDMVS-GGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
            + +V N L+ +Y + G +  ++ + D+M+ +D VSWN+M+ GY    Q  DAL + REM
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225

Query: 479 QNMEEEKN---------------RNNVYDLDETVL------------------------- 498
             + ++ +                 NV  ++E  +                         
Sbjct: 226 DGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGK 285

Query: 499 -----------RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                        +P++IT  +VL  CG LSAL  G+ IH Y  R  L  ++++ ++L+D
Sbjct: 286 SVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLID 345

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYA+CGCL  A+RVFD M  R+V +W  +I AYGM G+G   + L   M   G       
Sbjct: 346 MYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQ-----S 400

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ + F+A+ +ACSHSG+++EG   F +M DDY I P  +H+AC+VDLLGR+G+V++AY 
Sbjct: 401 PDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYN 460

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           +I  MP + ++   W +LL +CR++ N++IG +AA  L  L P+ + +YVLLSNIY+ A 
Sbjct: 461 IIKQMPMKPNER-VWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAG 519

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W +   +R  MK   +RK PG S +E  +++H FLAGD  H QS++++  L  L  +M+
Sbjct: 520 RWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMK 579

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + GYVP T   LH+V EE+KE  L  HSEKLAI F ILNT   + IR+ KNLRVC DCH 
Sbjct: 580 ELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHI 638

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           A K ISKI  REI++RD  RFHHFK+G CSCGDYW
Sbjct: 639 AAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 39/351 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   ++ + +A+L + +M      PD++ +P VLKA +   +L +G Q+H  V K G 
Sbjct: 105 IRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGL 164

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L ++ V N L+ +YGKCG  + +   V D +  KD VSWNSM+A   +  ++D AL+  
Sbjct: 165 DL-NLFVGNGLIALYGKCGC-LPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDIC 222

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M     +P + T+ S+  A +N S             N L V E              
Sbjct: 223 REMDGVRQKPDACTMASLLPAVTNTSSE-----------NVLYVEE-------------- 257

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
                     +F + E + LVSWN ++S   +N    ++V    QM    ++PD ++ AS
Sbjct: 258 ----------MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCAS 307

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VL AC  L  L  G+ IH Y  R   L  N  + ++L+DMY  C  +E  +RVFD +  +
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKK-LCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR 366

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +A W ++I+ YG       A+ LF +M+  +G  P++    +++ AC  S
Sbjct: 367 DVASWTSLISAYGMTGQGYNAVALFTEMQN-SGQSPDSIAFVAILSACSHS 416



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           + T+A+ L  +      ++  V ++F  + +K  VSWN MI+   +      +++ +  M
Sbjct: 234 ACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQM 293

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKL 230
               VEP + T  SV  AC +LS    L LGR++H    R     N  + N+L+ MYA+ 
Sbjct: 294 GKCEVEPDAITCASVLRACGDLS---ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARC 350

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G ++DAK +F   + RD+ SW +++S+     +   AV    +M   G  PD ++  ++L
Sbjct: 351 GCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAIL 410

Query: 291 PACSHLEMLDTGK 303
            ACSH  +L+ GK
Sbjct: 411 SACSHSGLLNEGK 423



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 25/227 (11%)

Query: 400 EAFPD---KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
           + +PD    + +H     L    +  +   LM  Y+  G   +++ +FD +  R+ + +N
Sbjct: 43  DQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYN 102

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI  Y     + DAL++ R+M +                     P+  T   VL  C  
Sbjct: 103 VMIRSYMNNHLYDDALLVFRDMVSGGFS-----------------PDHYTYPCVLKACSC 145

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
              L  G ++H    +  L  ++ VG+ L+ +Y KCGCL  AR V D M  ++V++WN +
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSM 205

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
           +  Y  + +  + L++ + M  +G R    KP+  T  +L  A +++
Sbjct: 206 VAGYAQNMQFDDALDICREM--DGVRQ---KPDACTMASLLPAVTNT 247



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 10/197 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y++M + +++PD     +VL+A   +  L LG++IH +V +      ++ + N+L++MY 
Sbjct: 290 YLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKL-CPNMLLENSLIDMYA 348

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           +CG  + D  +VFDR+  +D  SW S+I+     G+   A+  F  M  S   P S   V
Sbjct: 349 RCGC-LEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFV 407

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN---ALMAMYAKLGRVDDAKTLFK 241
           ++  ACS+     GL    + +   +      T I+     L+ +  + GRVD+A  + K
Sbjct: 408 AILSACSH----SGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIK 463

Query: 242 SFEDR-DLVSWNTIVSS 257
               + +   W  ++SS
Sbjct: 464 QMPMKPNERVWGALLSS 480


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/604 (38%), Positives = 359/604 (59%), Gaps = 26/604 (4%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+    + +L  C++L  L  G+ IHA+ +++    D+  + + +++MY  C  +E  
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           + +FD +  K +  W  +I+GY Q+    EAL LF KM  + G  PN  T+SS++ A   
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL-GFQPNEFTLSSLLKASGT 218

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +      +H  ++K G   + +V ++L+DMY+R   +  +K IF+ +  ++ VSWN +
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+   G+    + L  +M     E                 P   T  +V   C +  
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFE-----------------PTHFTYSSVFTACASSG 321

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L +GK +HA+ I++       +G+ L+DMYAK G +  A++VF  +  +++++WN II 
Sbjct: 322 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 381

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y  HG G E L+L + M+       +V+PNE+TF+++  ACSHSG++ EG   F  MK 
Sbjct: 382 GYAQHGLGAEALQLFEQMLK-----AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 436

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            + IE    H+  VVDLLGRAG++ +A + I  MP +   A  W +LLG+CR+H+N+++G
Sbjct: 437 -HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK-PTAAVWGALLGSCRMHKNMDLG 494

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             AA+ +F L+P  +  +VLLSNIY+SA     A  VRK MKE GV+KEP CSW+E  +E
Sbjct: 495 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 554

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+A D SH   E++    E +S ++++ GYVPDTS VL  +N++++E  L  HSEKL
Sbjct: 555 VHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKL 614

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AF +L TPPG TIR+ KN+R+C DCH A KF S++  REII+RD  RFHHF +G CSC
Sbjct: 615 ALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSC 674

Query: 879 GDYW 882
            DYW
Sbjct: 675 RDYW 678



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 204/393 (51%), Gaps = 17/393 (4%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++P+   +  +L     ++ L  G+ IHAH+    +    + + N ++NMY KCGS + +
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFE-DDLVLLNFILNMYAKCGS-LEE 158

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FD++  KD VSW  +I+   + G+   AL  F  ML+   +P+ FTL S+ L  S 
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL-LKASG 217

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               D    GRQ+H  SL+ G + N  + ++L+ MYA+   + +AK +F S   +++VSW
Sbjct: 218 TGPSD--HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N +++  ++  +    +    QM  +G +P   + +SV  AC+    L+ GK +HA+ ++
Sbjct: 276 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 335

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +      +++G+ L+DMY     ++  ++VF  +  + I  WN++I+GY Q+    EAL 
Sbjct: 336 SGGQ-PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 394

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDRYVQNAL 427
           LF +M + A + PN  T  SV+ AC  S    +     E +  H I+  +     V    
Sbjct: 395 LFEQMLK-AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV---- 449

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
           +D+  R GR+  +    ++M ++ T + W  ++
Sbjct: 450 VDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 145/261 (55%), Gaps = 6/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S Q  EA+  + +M     QP+ F   ++LKA         G+Q+HA  
Sbjct: 173 SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KYGY ++ V V ++L++MY +  + M +   +F+ +  K+ VSWN++IA   R G+ + 
Sbjct: 233 LKYGYDMN-VHVGSSLLDMYARW-AHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +  F  ML    EP+ FT  SV  AC++      L  G+ VH + ++ G +   +I N 
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACAS---SGSLEQGKWVHAHVIKSGGQPIAYIGNT 347

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DAK +F+    +D+VSWN+I+S  +Q+    EA+    QM    ++P+
Sbjct: 348 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 407

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            ++  SVL ACSH  +LD G+
Sbjct: 408 EITFLSVLTACSHSGLLDEGQ 428


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/785 (34%), Positives = 434/785 (55%), Gaps = 78/785 (9%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +  + R     +A+L +IEM  + + PDNF  P VLKA   +Q + LGK +H +V
Sbjct: 1244 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 1303

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K G+G + V V+++LV+MYGKCG  + D  KVFD + EK+ V+WNSMI    + G    
Sbjct: 1304 LKMGFG-ACVFVSSSLVDMYGKCGV-LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQE 1361

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFI 219
            A++ F  M    +EP+  T+ S   A +NL   D L  G+Q H     NSL   + +  +
Sbjct: 1362 AIDVFYDMRVEGIEPTRVTVASFLSASANL---DALIEGKQGHAIAILNSL---DLDNIL 1415

Query: 220  MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             ++++  Y+K+G ++DA+ +F    ++D+V+WN ++SS  Q+ +  +A+     M    +
Sbjct: 1416 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 1475

Query: 280  KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            + D V+++S+L A +    +  GKE H Y +R ++  D   V ++++DMY  C  ++  R
Sbjct: 1476 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESD-VVVANSIIDMYAKCERIDDAR 1534

Query: 340  RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +VFD  +++ + LWN ++  Y Q     EAL LF +M+    + PN  + +SV+      
Sbjct: 1535 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQ-FDSVPPNVISWNSVI------ 1587

Query: 400  EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                           LG  R+  V  A  DM+S+M  +     +         ++W T+I
Sbjct: 1588 ---------------LGFLRNGQVNEA-KDMFSQMQSLGFQPNL---------ITWTTLI 1622

Query: 460  TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            +G    G   +A++  ++MQ               E  +RP   SIT  +VL  C  + +
Sbjct: 1623 SGLAQSGFGYEAILFFQKMQ---------------EAGIRPSIASIT--SVLLACTDIPS 1665

Query: 520  LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
            L  G+ IH +  R+     V V ++LVDMYAKCG ++ A++VF +M  + +  +N +I A
Sbjct: 1666 LWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISA 1725

Query: 580  YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
            Y +HG+  E L L K++  EG     ++P+ +TF ++ +ACSH+G+V+EG++LF  M   
Sbjct: 1726 YALHGQAVEALALFKHLQKEG-----IEPDSITFTSILSACSHAGLVNEGLNLFADMVSK 1780

Query: 640  YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            + + P  +HY CVV LL R G +++A +LI  MP + D A    SLL ACR H  +E+GE
Sbjct: 1781 HNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPD-AHILGSLLTACREHHEIELGE 1839

Query: 700  IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
              +++LF LEP  + +YV LSN Y++A  W +  ++R  MK  G+RK PGCSWI+ G ++
Sbjct: 1840 YLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKL 1899

Query: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
            + F+AGDGSH ++E+++  L  L   MR  GYVP  S      NEE     LC  ++KL 
Sbjct: 1900 NVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIAS------NEEN----LCSRAQKLL 1949

Query: 820  IAFGI 824
              + +
Sbjct: 1950 CKYAV 1954



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 266/533 (49%), Gaps = 41/533 (7%)

Query: 139  RITEKDQ------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            ++ EKD+       S+   I++LC+ G    ++     M + + +        +   C  
Sbjct: 1127 KLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCV- 1185

Query: 193  LSRRDGLRLGRQVHGNSLRVGEW---NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
                  L  G+Q+H   L+ G++   N ++   L+  YAK    + A  LF     R++ 
Sbjct: 1186 --YERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVF 1243

Query: 250  SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
            SW  IV    +     +A++   +M   G+ PD   + +VL AC  L+++  GK +H Y 
Sbjct: 1244 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 1303

Query: 310  LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
            L+        FV S+LVDMY  C  +E  R+VFD + +K +  WN+MI GY QN  ++EA
Sbjct: 1304 LKMG-FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEA 1362

Query: 370  LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL--GLGRDRYVQNAL 427
            + +F  M  V G+ P   T++S + A    +A    EG  GHAI +   L  D  + +++
Sbjct: 1363 IDVFYDM-RVEGIEPTRVTVASFLSASANLDAL--IEGKQGHAIAILNSLDLDNILGSSI 1419

Query: 428  MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
            ++ YS++G IE ++ +F  M  +D V+WN +I+ Y    Q G AL +   M      ++ 
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLM------RSE 1473

Query: 488  NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
            N  +D           S+TL ++L      S +  GKE H Y IR  L +DVVV ++++D
Sbjct: 1474 NLRFD-----------SVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 1522

Query: 548  MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
            MYAKC  ++ AR+VFD    R+++ WN ++ AY   G   E L+L   M     +   V 
Sbjct: 1523 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQM-----QFDSVP 1577

Query: 608  PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
            PN +++ ++      +G V+E  D+F +M+   G +P+   +  ++  L ++G
Sbjct: 1578 PNVISWNSVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWTTLISGLAQSG 1629



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 22/172 (12%)

Query: 510  VLPGCGALSALAKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +L GC    AL  G++IHA  ++N    A +  V + LV  YAKC     A R+F  + V
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 1239

Query: 568  RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            RNV +W  I+      G  ++ L     M   G     V P+      +  AC    ++ 
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG-----VFPDNFVLPNVLKACGSLQLIG 1294

Query: 628  EGMDLF-YKMKDDYGIEPSPDHYACV------VDLLGRAGKVEDAYQLINMM 672
             G  +  Y +K  +G        ACV      VD+ G+ G +EDA ++ + M
Sbjct: 1295 LGKGVHGYVLKMGFG--------ACVFVSSSLVDMYGKCGVLEDARKVFDSM 1338


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 345/595 (57%), Gaps = 24/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S+L +C     L  G+++H   L + +  D + + + LVD+Y  C +V   RR+FD +  
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPD-TVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + + LWN +I  Y +    E A+ L+  M E  G+ P+  T   V+ AC           
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVE-HGVEPDNFTYPLVLKACAALLDLETGRE 184

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H        G+D +V   ++DMY++ G ++ ++ +FD + VRD V WN+MI  Y   G+
Sbjct: 185 VHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGR 244

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL L R+M         N +           P   TL++ +      +AL +G+E+H
Sbjct: 245 PMEALALCRDMAA-------NGI----------GPTIATLVSAVSAAADAAALPRGRELH 287

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            +  R        + ++LVDMYAK G +  AR +F+ +  R +++WN +I  YGMHG   
Sbjct: 288 GFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHAD 347

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E L L   M  +     +V P+ +TF+ + +AC+H GMV E  + FY M + Y I+P+  
Sbjct: 348 EALALFNKMKGDA----QVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQ 403

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY CV+D+LG  G+ E+AY LI  M  E D +G W +LL  C+IH+NVE+GE+A Q L  
Sbjct: 404 HYTCVIDVLGHTGRFEEAYDLIKGMSIEPD-SGIWGALLNGCKIHKNVELGELALQKLIE 462

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP+ A +YV LSNIY+ +  W+KA  VRK M   G++K   CSWIE   + H FL GD 
Sbjct: 463 LEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDA 522

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH +S++++G LE L   M   GYVPD   V HNV+++EK  ++  HSE+LAIAFG+++T
Sbjct: 523 SHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLIST 582

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPGT + V KNLRVC DCH   K IS+I  REII+RDV R+HHF NG CSC DYW
Sbjct: 583 PPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 209/418 (50%), Gaps = 19/418 (4%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++L++      L  G+Q+H  ++  G G  +V ++  LV++Y  CG  +    ++FD + 
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTV-LSTKLVDLYAACGQ-VGHARRLFDGMP 124

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +++   WN +I    R G  + A+  +R M+   VEP +FT   V  AC+ L     L  
Sbjct: 125 KRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALL---DLET 181

Query: 202 GRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           GR+VH   +  R G+ + F+   ++ MYAK G VDDA+ +F     RD V WN+++++  
Sbjct: 182 GREVHQRVSGTRWGQ-DVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYG 240

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           QN + +EA+   R MA  GI P   ++ S + A +    L  G+E+H +  R    + + 
Sbjct: 241 QNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDK 300

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            + ++LVDMY     V+  R +F+ +  +++  WNAMI GYG + + +EAL LF KM+  
Sbjct: 301 -LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGD 359

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEG-----IHGHAIKLGLGRDRYVQNALMDMYSRM 434
           A + P+  T   V+ AC       + +      ++ ++IK  +         ++D+    
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQH----YTCVIDVLGHT 415

Query: 435 GRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           GR E +  +   M +  D+  W  ++ G  I        + L+++  +E E   N V+
Sbjct: 416 GRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVH 473



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ AR      A+  Y  M    ++PDNF +P VLKA A + DL  G+++H  V 
Sbjct: 131 WNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVS 190

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
              +G   V V   +V+MY KCG  + D   VFD I  +D V WNSMIA   + G+   A
Sbjct: 191 GTRWG-QDVFVCAGVVDMYAKCGC-VDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEA 248

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L   R M  + + P   T+ ++  A S  +    L  GR++HG   R G      +  +L
Sbjct: 249 LALCRDMAANGIGP---TIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPD 282
           + MYAK G V  A+ LF+    R+LVSWN ++     +    EA+    +M     + PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV--ECGR- 339
            ++   VL AC+H  M++  KE          L+ N++     V  Y    +V    GR 
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFF-------YLMVNAYSIKPTVQHYTCVIDVLGHTGRF 418

Query: 340 -RVFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
              +D I    I     +W A++ G   +   E  E AL   I++E
Sbjct: 419 EEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 25/284 (8%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++ +CV S +      +HG  +  GLG D  +   L+D+Y+  G++  ++ +FD M  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+   WN +I  Y   G    A+ L R M     E                 P++ T   
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVE-----------------PDNFTYPL 168

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           VL  C AL  L  G+E+H          DV V + +VDMYAKCGC++ AR VFD + VR+
Sbjct: 169 VLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRD 228

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            + WN +I AYG +G   E L L ++M A G     + P   T ++  +A + +  +  G
Sbjct: 229 AVVWNSMIAAYGQNGRPMEALALCRDMAANG-----IGPTIATLVSAVSAAADAAALPRG 283

Query: 630 MDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            +L  +  +  +G++        +VD+  ++G V+ A  L   +
Sbjct: 284 RELHGFGWRRGFGLQDKLK--TSLVDMYAKSGWVQVARVLFEQL 325


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/669 (38%), Positives = 368/669 (55%), Gaps = 69/669 (10%)

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           FLR ++     PD   + +   +C  L +    + +HA A  + +  D  FV S+L+  Y
Sbjct: 10  FLRHVSF---PPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARD-PFVASSLLHAY 62

Query: 330 CNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
                    R +FD +    + +  W+A++  +      E A  L  +M    G+ PN  
Sbjct: 63  LRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVI 122

Query: 388 TMSSVVPACVRS---------------EAF--PDKEGI-------------------HGH 411
           T + +V    RS               E    PD  G+                   HG+
Sbjct: 123 TWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGY 182

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           A+K G   D  V  AL+DMY + G+      +FD+    D  S N +I G +   Q  +A
Sbjct: 183 AVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEA 242

Query: 472 LMLLREMQNMEEEKNR-----------NNVYDLDETVL-------RPKPNSITLMTVLPG 513
           L L +E  +   E N             N  DL+             +PNS+T+  VLP 
Sbjct: 243 LRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPA 302

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              ++AL  G+  H +A+R     DV V SALVDMYAKCG +  AR +FD M  RNV++W
Sbjct: 303 FANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSW 362

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  Y M+GE    + +  +M+       + KP+ VTF  L AAC+ +G+  EG   F
Sbjct: 363 NAMIGGYAMYGEAVNAVWMFHSMLK-----CKQKPDMVTFTCLLAACTQAGLTEEGRHYF 417

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
            +M ++YG+ P  +HYAC+V LLGRAGK+++AY LI+ MP E D A  W SLLG+CR+H 
Sbjct: 418 KEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPD-AYIWGSLLGSCRVHG 476

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NV++ E+AA+ LF LEP+ A +YVLLSNIY+S ++WD+   VR+ MK++G++KE GCSWI
Sbjct: 477 NVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWI 536

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E  +++H  LAGD SH     +   +  L+ +MRK G+VP T  VLH+V E+EK+ +L  
Sbjct: 537 EIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAV 596

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLA+A G+++T PGTT+RV KNLR+C DCH+A KFIS  E REI +RD  RFHHF  
Sbjct: 597 HSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSG 656

Query: 874 GTCSCGDYW 882
           G CSCGD+W
Sbjct: 657 GKCSCGDFW 665



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 183/397 (46%), Gaps = 54/397 (13%)

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           D   E + ++WN +++ L R G+   A+ A   M    +     T VS AL  S +    
Sbjct: 114 DGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCAL--SAVGDVG 171

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR------------------------ 232
            + +G+Q+HG +++ G   +  ++ AL+ MY K G+                        
Sbjct: 172 LVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIA 231

Query: 233 -------VDDAKTLFKSFEDR----DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                  V +A  LFK F DR    ++VSW +IV+   QN K LEAV F R+M  +G +P
Sbjct: 232 GLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEP 291

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I  VLPA +++  L  G+  H +ALR   L D  +V SALVDMY  C  V+  R +
Sbjct: 292 NSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHD-VYVSSALVDMYAKCGRVKDARII 350

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  + +  WNAMI GY        A+ +F  M +     P+  T + ++ AC  ++A
Sbjct: 351 FDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQK-PDMVTFTCLLAAC--TQA 407

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYS-------RMGRIEISKTIFDDMEVR-DTV 453
              +EG H          + Y  +  M+ Y+       R G+++ +  +  DM    D  
Sbjct: 408 GLTEEGRH----YFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAY 463

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            W +++    + G    A +   ++ ++E E   N V
Sbjct: 464 IWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYV 500



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 46/294 (15%)

Query: 54  RSNQFREAILSYIEMTRSDI-QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           RS + R+A+++   M    + +PD       L AV  +  +S+G+Q+H + VK G   + 
Sbjct: 133 RSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGC-RAD 191

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFD---------------------------------- 138
             V   L++MYGKCG    +V +VFD                                  
Sbjct: 192 ACVVTALIDMYGKCGQAA-EVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFV 250

Query: 139 -RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            R  E + VSW S++A   + GK   A+E FR M     EP+S T+  V  A +N++   
Sbjct: 251 DRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVA--- 307

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            L  GR  H  +LR G   + ++ +AL+ MYAK GRV DA+ +F +   R++VSWN ++ 
Sbjct: 308 ALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIG 367

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG----KEIH 306
             +   + + AV     M     KPD V+   +L AC+   + + G    KE+H
Sbjct: 368 GYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH 421



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ +  EA+  + EM     +P++   P VL A A +  L  G+  H   
Sbjct: 260 SWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFA 319

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+ L  V V++ LV+MY KCG  + D   +FD +  ++ VSWN+MI     +G+   
Sbjct: 320 LRKGF-LHDVYVSSALVDMYAKCGR-VKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVN 377

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLS-RRDGLRLGRQVH---GNSLRVGEWNTFI 219
           A+  F  ML    +P   T   +  AC+      +G    +++H   G S R+  +   +
Sbjct: 378 AVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMV 437

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
                 +  + G++D+A  L      + D   W +++ S
Sbjct: 438 -----TLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGS 471


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/716 (34%), Positives = 397/716 (55%), Gaps = 60/716 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F++ ++ +L+ WNT+    
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
           + +   + A+     M   G+ P+  +   +L +C+ L++   G++IH + L+     D+
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
            +  S +                           +AL+  Y +   +E  +++FD I  K
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNA+I+GY     ++EAL LF +M +   + P+ +TM +VV AC +S +      +
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKT-NVKPDESTMVTVVSACAQSGSIQLGRQV 257

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H      GLG +  + NAL+D+YS+ G +E +  +F  +  +D +SWNTMI GYT    +
Sbjct: 258 HSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLY 317

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH 
Sbjct: 318 KEALLLFQEMLRSGEN-----------------PNDVTMLSILPACAQLGAIDFGRWIHV 360

Query: 529 YAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           Y  + +  +     + ++L+DMYAKCG +  A +VF+ M  R +   N +I  + MHG  
Sbjct: 361 YIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRA 420

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++   M   G     ++P+++TF+ L +ACSHSGM+  G  +F  M  +Y I P  
Sbjct: 421 NAAFDIFSRMRKNG-----IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKL 475

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C++DLLG  G  ++A ++IN M  E D    W SLL AC++H NVE+GE  AQ L 
Sbjct: 476 EHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGV-IWCSLLKACKMHGNVELGESFAQKLI 534

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +EP+    YVLLSNIY++A  W++  ++R  + + G++K PGCS IE    +H+F+ GD
Sbjct: 535 KIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H ++ +++G LE +   + + G+VPDTS VL  + EE K+  L  HSEKLAIAFG+++
Sbjct: 595 KFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLIS 654

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 655 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 235/474 (49%), Gaps = 70/474 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    AI  Y+ M    + P+++ FP +LK+ A ++    G+QIH HV+
Sbjct: 71  WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--SDMWDVY---------------------------- 134
           K GY L  + V  +L++MY K G   D   V+                            
Sbjct: 131 KLGYELD-LYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQ 189

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD I  KD VSWN++I+     G    AL+ F+ M+ +NV+P   T+V+V  AC   +
Sbjct: 190 KMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC---A 246

Query: 195 RRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +   ++LGRQVH   +   +G  N  I+NAL+ +Y+K G V+ A  LF+   ++D++SWN
Sbjct: 247 QSGSIQLGRQVHSWIDDHGLGS-NLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  ++M   G  P+ V++ S+LPAC+ L  +D G+ IH Y  + 
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S + ++L+DMY  C ++E   +VF+ +  + ++  NAMI G+  +     A  
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFD 425

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY---VQN--- 425
           +F +M +  G+ P+  T   ++ AC              H+  L LGR  +    QN   
Sbjct: 426 IFSRMRK-NGIEPDDITFVGLLSAC-------------SHSGMLDLGRRIFRSMTQNYKI 471

Query: 426 --------ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
                    ++D+   +G  + ++ + + M +  D V W +++     C  HG+
Sbjct: 472 TPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKA---CKMHGN 522



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +   +EA+  + EM +++++PD      V+ A A    + LG+Q+H+ +
Sbjct: 202 SWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWI 261

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G G S++ + N L+++Y KCG ++     +F  ++ KD +SWN+MI        +  
Sbjct: 262 DDHGLG-SNLKIVNALIDLYSKCG-EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKE 319

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++S+  AC+ L   D    GR +H      ++     + + 
Sbjct: 320 ALLLFQEMLRSGENPNDVTMLSILPACAQLGAID---FGRWIHVYIDKRIKGVTNASSLR 376

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A  +F S   R L + N ++   + + +   A     +M   GI+
Sbjct: 377 TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRI 461


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/672 (38%), Positives = 370/672 (55%), Gaps = 81/672 (12%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N    N L+A Y + G +D A  +F+  + +  V+WN+I+++ ++     E   + RQ+ 
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFE---YARQLF 96

Query: 276 LRGIKPDGVSIASVLPACS--HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            +  +P+ VS  +++ AC   HL + D                                 
Sbjct: 97  EKIPQPNTVSY-NIMLACHWHHLGVHD--------------------------------- 122

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
                R  FD +  K +A WN MI+   Q     EA  LF  M E      N  + S++V
Sbjct: 123 ----ARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPE-----KNCVSWSAMV 173

Query: 394 P---ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
               AC   +A    E  +   +     R      A++  Y + GR+E+++ +F +M +R
Sbjct: 174 SGYVACGDLDA--AVECFYAAPM-----RSVITWTAMITGYMKFGRVELAERLFQEMSMR 226

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
             V+WN MI GY   G+  D L L R M              L+  V   KPN+++L +V
Sbjct: 227 TLVTWNAMIAGYVENGRAEDGLRLFRTM--------------LETGV---KPNALSLTSV 269

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L GC  LSAL  GK++H    +  L++D   G++LV MY+KCG L  A  +F  +P ++V
Sbjct: 270 LLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDV 329

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN +I  Y  HG G++ L L   M  EG     +KP+ +TF+A+  AC+H+G+V  G+
Sbjct: 330 VCWNAMISGYAQHGAGKKALRLFDEMKKEG-----LKPDWITFVAVLLACNHAGLVDLGV 384

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
             F  M+ D+GIE  P+HYAC+VDLLGRAGK+ +A  LI  MP +   A  + +LLGACR
Sbjct: 385 QYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPA-IYGTLLGACR 443

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH+N+ + E AA+NL  L+P +A+ YV L+N+Y++   WD    +R+ MK+  V K PG 
Sbjct: 444 IHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGY 503

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SWIE    +H F + D  H +   +H  L++L ++M+  GYVPD   VLH+V EE KE L
Sbjct: 504 SWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQL 563

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG+L  P G  IRV KNLRVC DCH ATK+IS IE REII+RD  RFHH
Sbjct: 564 LLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHH 623

Query: 871 FKNGTCSCGDYW 882
           FK+G CSC DYW
Sbjct: 624 FKDGFCSCRDYW 635



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 206/478 (43%), Gaps = 71/478 (14%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           ++L K + +H  ++ +  ++V  +N L+  Y +CG D+    +VF+ +  K  V+WNS++
Sbjct: 21  VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCG-DIDSAVRVFEDMKVKSTVTWNSIL 79

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           A   +                   +P  F                     RQ+     ++
Sbjct: 80  AAFAK-------------------KPGHF------------------EYARQLFE---KI 99

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + NT   N ++A +     V DA+  F S   +D+ SWNT++S+L+Q     EA     
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKE-IHAYALRNDILIDNSFVGSALVDMYCN 331
            M     + + VS ++++        LD   E  +A  +R+ I        +A++  Y  
Sbjct: 160 AMP----EKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVI------TWTAMITGYMK 209

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
              VE   R+F  +S + +  WNAMI GY +N   E+ L LF  M E  G+ PNA +++S
Sbjct: 210 FGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLET-GVKPNALSLTS 268

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+  C    A    + +H    K  L  D     +L+ MYS+ G ++ +  +F  +  +D
Sbjct: 269 VLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN MI+GY    QHG     LR    M++E                KP+ IT + VL
Sbjct: 329 VVCWNAMISGY---AQHGAGKKALRLFDEMKKEG--------------LKPDWITFVAVL 371

Query: 512 PGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
             C     +  G +      R+  + T     + +VD+  + G L+ A  +   MP +
Sbjct: 372 LACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 15/168 (8%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           ++E+ R+E     FR        M  + ++P+  +  +VL   + +  L LGKQ+H  V 
Sbjct: 238 YVENGRAEDGLRLFRT-------MLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 290

Query: 105 KYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           K    LSS T A T LV+MY KCG D+ D +++F +I  KD V WN+MI+   + G    
Sbjct: 291 K--CPLSSDTTAGTSLVSMYSKCG-DLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKK 347

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           AL  F  M    ++P   T V+V LAC++    D   LG Q + N++R
Sbjct: 348 ALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVD---LGVQ-YFNTMR 391


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 279/828 (33%), Positives = 445/828 (53%), Gaps = 68/828 (8%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           D  L + +HA  +K       + + N L++ Y K G  + D  KVF  ++  + VS+ ++
Sbjct: 112 DPDLARAVHAQFLKLE---EDIFLGNALISAYLKLGL-VRDADKVFSGLSCPNVVSYTAL 167

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I+   +    D A+E F  ML S +EP+ +T V++  AC    R    +LG QVHG  ++
Sbjct: 168 ISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACI---RNMDYQLGSQVHGIVVK 224

Query: 212 VGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G  +  FI NALM +Y K G +D    LF+   +RD+ SWNT++SSL +  K+ EA  +
Sbjct: 225 LGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDY 284

Query: 271 LRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            R M L +G+K D  S++++L AC+       G+++HA AL+   L  +  V S+L+  Y
Sbjct: 285 FRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVG-LESHLSVSSSLIGFY 343

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGY----------------------------- 360
             C        +F+ +  + +  W  MIT Y                             
Sbjct: 344 TKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLA 403

Query: 361 --GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
              +N+    AL LFI+M E  G+  +  T++S++ AC   ++F   + I G  +K G+ 
Sbjct: 404 GLSRNDDGSRALELFIEMLE-EGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGIL 462

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIF--DDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
            +  ++ AL+DMY+R GR+E ++ IF    +E   T    +MI GY   G+  +A+ L  
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
             Q+            +DE         +   ++L  CG++     GK++H +A+++ L 
Sbjct: 523 SGQS-------EGAIVMDE---------VMSTSILSLCGSIGFHEMGKQMHCHALKSGLI 566

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           T+  VG+A V MY+KC  ++ A RVF+ M ++++++WN ++  + +H +G + L + K M
Sbjct: 567 TETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHS--GMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
              G     +KP+ +TF  + +A  H+   +V     LF  M+ ++ I+P+ +HYA  + 
Sbjct: 627 EKAG-----IKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFIS 681

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           +LGR G +E+A Q I  MP E D    W +LL +CRI++N  + ++AA+N+  +EP    
Sbjct: 682 VLGRWGLLEEAEQTIRNMPLEPD-VYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            Y+L SN+YS++  W  +  VR+ M+E G RK P  SWI   ++IH F A D SH Q + 
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L     K GYVPDTS VL  V E +K+  L  HS KLA  FGIL T PG  I+
Sbjct: 801 IYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQ 860

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KN+R+C DCH   K++S +  R+I+LRD   FH F +G CSC DYW
Sbjct: 861 IVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/760 (36%), Positives = 419/760 (55%), Gaps = 63/760 (8%)

Query: 144 DQVSWNSMIATLCRF--------GKWDLALEAFRMMLY--SNVEPSSFTLVSVALACSNL 193
           +Q+SW     TL RF         + DL+       LY  S + PS++      L  S  
Sbjct: 2   NQISW-----TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKC 56

Query: 194 SRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            R    R   Q       + + N F  NA++A YAK  R   A  LF    + DLVS+NT
Sbjct: 57  GRLAWARKAFQ------DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNT 110

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALR 311
           ++S+ +   +   A+     M   G+  D  ++++V+ AC      D G   ++H+ A+ 
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD----DVGLIGQLHSVAVS 166

Query: 312 NDILIDNSFVG--SALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQNEYDEE 368
           +     +S+V   +AL+  Y    +++  +RVF  +   +  + WN+MI  YGQ++   +
Sbjct: 167 SGF---DSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           AL LF +M    GL  +  T++SV+ A    E        HG  IK G  ++ +V + L+
Sbjct: 224 ALGLFQEMVR-RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282

Query: 429 DMYSRMGR-IEISKTIFDDMEVRDTVSWNTMITGYTICGQH-GDALMLLREMQNMEEEKN 486
           D+YS+ G  +   + +F+++   D V WNTM++GY+   +   DAL   R+MQ +     
Sbjct: 283 DLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY--- 339

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSAL 545
                         +PN  + + V+  C  LS+ ++GK+IH+ A+++ + ++ + V +AL
Sbjct: 340 --------------RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNAL 385

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + MY+KCG L  ARR+FD M   N ++ N +I  Y  HG   E L L + M+       +
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER-----Q 440

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + P  +TFI++ +AC+H+G V EG + F  MK+ + IEP  +HY+C++DLLGRAGK+ +A
Sbjct: 441 IAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             LI  MP      G W+SLLGACR H N+E+   AA  +  LEP  A+ YV+LSN+Y+S
Sbjct: 501 ENLIARMPFNPGSIG-WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYAS 559

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
           A  W++   VRK M++ GV+K+PGCSWIE    IH F+A D SH   ++++ FLE +S +
Sbjct: 560 AGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGK 619

Query: 786 MRKEGYVPDTSCVL---HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           M++ GYVPD    L         EKE  L  HSEKLA+AFG+++T  G  + V KNLR+C
Sbjct: 620 MKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRIC 679

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A KFIS I  REI +RD  RFH FK G CSCGDYW
Sbjct: 680 GDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 172/588 (29%), Positives = 272/588 (46%), Gaps = 93/588 (15%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD------- 132
           F  +LK     +DLS GK +H+  +K  +   S   +N  + +Y KCG   W        
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIK-SFIPPSTYFSNHFILLYSKCGRLAWARKAFQDI 69

Query: 133 -----------------------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                                   +++FD+I E D VS+N++I+     G+   AL  F 
Sbjct: 70  SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMY 227
            M    ++   FTL +V  AC      D + L  Q+H  ++  G +++++   NAL+  Y
Sbjct: 130 GMREMGLDMDXFTLSAVITACC-----DDVGLIGQLHSVAVSSG-FDSYVSVNNALLTYY 183

Query: 228 AKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
            K G +DDAK +F      RD VSWN+++ +  Q+ +  +A+   ++M  RG+  D  ++
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDF 344
           ASVL A + LE L  G + H   ++      NS VGS L+D+Y  C     +C R+VF+ 
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDC-RKVFEE 301

Query: 345 ISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           I++  + LWN M++GY QN E+ E+AL  F +M+ + G  PN  +   V+ AC    +  
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI-GYRPNDCSFVCVISACSNLSSPS 360

Query: 404 DKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
             + IH  A+K  +  +R  V NAL+ MYS+ G ++ ++ +FD M   +TVS N+MI GY
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               QHG  +  L   Q M E +                P SIT ++VL  C     + +
Sbjct: 421 A---QHGIEMESLHLFQWMLERQ--------------IAPTSITFISVLSACAHTGRVEE 463

Query: 523 GKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
           G     +   NM+     +       S ++D+  + G L+ A  +   MP     I W  
Sbjct: 464 G-----WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 576 IIMAYGMHGE-------GQEVLEL----------LKNMVAEGSRGGEV 606
           ++ A   HG          +VL+L          L NM A   R  EV
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEV 566



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 7/266 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + SW   + +  +  +  +A+  + EM R  +  D F   +VL A   ++DLS G Q 
Sbjct: 203 RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQF 262

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  ++K G+  +S  V + L+++Y KCG  M D  KVF+ ITE D V WN+M++   +  
Sbjct: 263 HGQLIKTGFHQNS-HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNE 321

Query: 160 KW-DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWN 216
           ++ + ALE FR M      P+  + V V  ACSNLS       G+Q+H  +L+  +    
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ---GKQIHSLALKSDIPSNR 378

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + NAL+AMY+K G + DA+ LF    + + VS N++++  +Q+   +E++   + M  
Sbjct: 379 ISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
           R I P  ++  SVL AC+H   ++ G
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEG 464


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/779 (33%), Positives = 410/779 (52%), Gaps = 105/779 (13%)

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS----------- 242
           RR  L+L R VHGN +  G + +  I+N L+ +Y K   +D A+ LF             
Sbjct: 26  RRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTT 85

Query: 243 -----------------FED-----RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
                            FE+     RD V +N +++  S N+    A+    +M   G K
Sbjct: 86  MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 281 PDGVSIASVLPACSHLEMLDTGKE---IHAYALRNDILIDNSFVGSALVDMYCNCRE--- 334
           PD  + ASVL   + +  +D  K+    HA AL++      S V +ALV +Y  C     
Sbjct: 146 PDDFTYASVLAGLALV--VDDEKQCVQFHAAALKSGAGYVTS-VSNALVSVYSRCASSPS 202

Query: 335 -VECGRRVFDFISDK--------------------------------KIALWNAMITGYG 361
            +   R+VFD I +K                                K+  +NAMI+GY 
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
                +EAL +  +M   +G+  +  T  SV+ AC  +      + +H + ++    R+ 
Sbjct: 263 NCGLYQEALEMVRRMVS-SGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR----RED 317

Query: 422 Y---VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           +     N+L+ +Y + G+   ++ IF+ M  +D VSWN +++GY   G  G+A ++ +EM
Sbjct: 318 FSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377

Query: 479 Q------------NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGK 524
           +             + E         L   + R   +P        +  C  L A   G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           + HA  ++    + +  G+AL+ MYAKCG +  A++VF  MP  + ++WN +I A G HG
Sbjct: 438 QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHG 497

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G E +++ + M+ +G     ++P+ +TF+ +  ACSH+G+V +G   F  M+  Y I P
Sbjct: 498 HGVEAVDVYEEMLKKG-----IRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPP 552

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             DHYA ++DLL R+GK  +A  +I  +P +   A  W +LL  CR+H N+E+G IAA  
Sbjct: 553 GADHYARLIDLLCRSGKFSEAESIIESLPFK-PTAEIWEALLSGCRVHGNMELGIIAADK 611

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           LF L P+    Y+LLSN+Y++   W++   VRK M++ GV+KE  CSWIE   ++H FL 
Sbjct: 612 LFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE-EKETLLCGHSEKLAIAFG 823
            D SH ++E ++ +L++L + MR+ GYVPDTS VLH+V  +  KE +L  HSEK+A+AFG
Sbjct: 672 DDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++  PPGTTIR+ KNLR C DCH   +F+SK+  R+IILRD +RFHHF+NG CSCG++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 224/494 (45%), Gaps = 92/494 (18%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA-GIQDLSLGKQIHAHVVKYGYGLS 111
           + +N    AI  + +M     +PD+F + +VL  +A  + D     Q HA  +K G G  
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYV 183

Query: 112 SVTVANTLVNMYGKCGSD---MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL----- 163
           + +V+N LV++Y +C S    +    KVFD I EKD+ SW +M+    + G +DL     
Sbjct: 184 T-SVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELL 242

Query: 164 ---------------------------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
                                      ALE  R M+ S +E   FT  SV  AC+N    
Sbjct: 243 KGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARL- 301

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
             L+LG+QVH   LR  +++    N+L+ +Y K G+ ++A+ +F+    +DLVSWN ++S
Sbjct: 302 --LQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLS 359

Query: 257 SLSQNDKFLEAVMFLRQMALR-------------------------------GIKPDGVS 285
               +    EA +  ++M  +                               G +P   +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDF 344
            +  + +C+ L     G++ HA  ++  I  D+S   G+AL+ MY  C  VE  ++VF  
Sbjct: 420 FSGAIKSCAVLGAYCNGQQFHAQLVK--IGFDSSLSAGNALITMYAKCGVVEEAQQVFRT 477

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----- 399
           +       WNA+I   GQ+ +  EA+ ++ +M +  G+ P+  T  +V+ AC  +     
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLK-KGIRPDRITFLTVLTACSHAGLVDQ 536

Query: 400 --EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
             + F   E ++    ++  G D Y +  L+D+  R G+   +++I + +  + T   W 
Sbjct: 537 GRKYFNSMETVY----RIPPGADHYAR--LIDLLCRSGKFSEAESIIESLPFKPTAEIWE 590

Query: 457 TMITGYTICGQHGD 470
            +++G   C  HG+
Sbjct: 591 ALLSG---CRVHGN 601



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/596 (21%), Positives = 245/596 (41%), Gaps = 129/596 (21%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L L + +H +++ +G+      + N L+++Y K  S++    ++FD I+E D+++  +M+
Sbjct: 30  LQLARAVHGNIITFGFQ-PHAHILNRLIDVYCK-SSELDYARQLFDEISEPDKIARTTMV 87

Query: 153 ATLCRFGKWDLALEAFR---------------------------------MMLYSNVEPS 179
           +  C  G   LA   F                                   M +   +P 
Sbjct: 88  SGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGR----VD 234
            FT  SV    + +   D  +   Q H  +L+ G  + T + NAL+++Y++       + 
Sbjct: 148 DFTYASVLAGLALVV--DDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLH 205

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKF------------------------------ 264
            A+ +F    ++D  SW T+++   +N  F                              
Sbjct: 206 SARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCG 265

Query: 265 --LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-V 321
              EA+  +R+M   GI+ D  +  SV+ AC++  +L  GK++HAY LR +   D SF  
Sbjct: 266 LYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE---DFSFHF 322

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY--------------------- 360
            ++LV +Y  C +    R +F+ +  K +  WNA+++GY                     
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 361 ----------GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
                      +N + EE L LF  M+   G  P     S  + +C    A+ + +  H 
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAYCNGQQFHA 441

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K+G        NAL+ MY++ G +E ++ +F  M   D+VSWN +I      GQHG 
Sbjct: 442 QLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAAL---GQHGH 498

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAY 529
            +    E  ++ EE  +  +          +P+ IT +TVL  C     + +G++  ++ 
Sbjct: 499 GV----EAVDVYEEMLKKGI----------RPDRITFLTVLTACSHAGLVDQGRKYFNSM 544

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI-TWNVIIMAYGMHG 584
                +       + L+D+  + G  + A  + + +P +     W  ++    +HG
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +   A +    E +  +  M R   +P ++AF   +K+ A +     G+Q HA +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQL 443

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+  SS++  N L+ MY KCG  + +  +VF  +   D VSWN++IA L + G    
Sbjct: 444 VKIGFD-SSLSAGNALITMYAKCGV-VEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVE 501

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++ +  ML   + P   T ++V  ACS+
Sbjct: 502 AVDVYEEMLKKGIRPDRITFLTVLTACSH 530


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/604 (38%), Positives = 360/604 (59%), Gaps = 27/604 (4%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+    + +L  C++L  L  G+ IHA+ +++    D+  + + +++MY  C  +E  
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           + +FD +  K +  W  +I+GY Q+    EAL LF KM  + G  PN  T+SS++ A   
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL-GFQPNEFTLSSLLKASGT 218

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +      +H  ++K G   + +V ++L+DMY+R   +  +K IF+ +  ++ VSWN +
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+   G+    + L  +M     E                 P   T  +VL  C +  
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFE-----------------PTHFTYSSVL-ACASSG 320

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L +GK +HA+ I++       +G+ L+DMYAK G +  A++VF  +  +++++WN II 
Sbjct: 321 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 380

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y  HG G E L+L + M+       +V+PNE+TF+++  ACSHSG++ EG   F  MK 
Sbjct: 381 GYAQHGLGAEALQLFEQMLK-----AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 435

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            + IE    H+  VVDLLGRAG++ +A + I  MP +   A  W +LLGACR+H+N+++G
Sbjct: 436 -HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK-PTAAVWGALLGACRMHKNMDLG 493

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             AA+ +F L+P  +  +VLLSNIY+SA     A  VRK MKE GV+KEP CSW+E  +E
Sbjct: 494 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 553

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H F+A D SH   E++    E +S ++++ GYVPDTS VL  +N++++E  L  HSEKL
Sbjct: 554 VHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKL 613

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AF +L TPPG TIR+ KN+R+C DCH A KF S++  REII+RD  RFHHF +G CSC
Sbjct: 614 ALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSC 673

Query: 879 GDYW 882
            DYW
Sbjct: 674 RDYW 677



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 203/411 (49%), Gaps = 25/411 (6%)

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRV 233
           ++EP       +   C+ L +   L+ GR +H +      E +  ++N ++ MYAK G +
Sbjct: 100 SLEPERTLYSKMLNKCTYLRK---LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           ++A+ LF     +D+VSW  ++S  SQ+ +  EA+    +M   G +P+  +++S+L A 
Sbjct: 157 EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKAS 216

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
                   G+++HA++L+    + N  VGS+L+DMY     +   + +F+ ++ K +  W
Sbjct: 217 GTGPSDHHGRQLHAFSLKYGYDM-NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           NA+I G+ +    E  + LF +M    G  P   T SSV+ AC  S +    + +H H I
Sbjct: 276 NALIAGHARKGEGEHVMRLFXQMLR-QGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVI 333

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           K G     Y+ N L+DMY++ G I+ +K +F  +  +D VSWN++I+GY   G   +AL 
Sbjct: 334 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 393

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  +M                    + +PN IT ++VL  C     L +G+       ++
Sbjct: 394 LFEQMLKA-----------------KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 436

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
            +   V     +VD+  + G LN A +  + MP++     W  ++ A  MH
Sbjct: 437 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 205/393 (52%), Gaps = 18/393 (4%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++P+   +  +L     ++ L  G+ IHAH+    +    + + N ++NMY KCGS + +
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFE-DDLVLLNFILNMYAKCGS-LEE 158

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FD++  KD VSW  +I+   + G+   AL  F  ML+   +P+ FTL S+ L  S 
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL-LKASG 217

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
               D    GRQ+H  SL+ G + N  + ++L+ MYA+   + +AK +F S   +++VSW
Sbjct: 218 TGPSD--HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N +++  ++  +    +    QM  +G +P   + +SVL AC+    L+ GK +HA+ ++
Sbjct: 276 NALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIK 334

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +      +++G+ L+DMY     ++  ++VF  +  + I  WN++I+GY Q+    EAL 
Sbjct: 335 SGGQ-PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 393

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDRYVQNAL 427
           LF +M + A + PN  T  SV+ AC  S    +     E +  H I+  +     V    
Sbjct: 394 LFEQMLK-AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV---- 448

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
           +D+  R GR+  +    ++M ++ T + W  ++
Sbjct: 449 VDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 481



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 146/261 (55%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S Q  EA+  + +M     QP+ F   ++LKA         G+Q+HA  
Sbjct: 173 SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFS 232

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KYGY ++ V V ++L++MY +  + M +   +F+ +  K+ VSWN++IA   R G+ + 
Sbjct: 233 LKYGYDMN-VHVGSSLLDMYARW-AHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            +  F  ML    EP+ FT  SV LAC++      L  G+ VH + ++ G +   +I N 
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSV-LACAS---SGSLEQGKWVHAHVIKSGGQPIAYIGNT 346

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DAK +F+    +D+VSWN+I+S  +Q+    EA+    QM    ++P+
Sbjct: 347 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 406

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            ++  SVL ACSH  +LD G+
Sbjct: 407 EITFLSVLTACSHSGLLDEGQ 427


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/731 (35%), Positives = 410/731 (56%), Gaps = 28/731 (3%)

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
             M++   + P +FT   +  ACS +        G QVHG  +++G   + F+ N+L+  
Sbjct: 110 LHMIIVMGIVPDNFTFPFLLSACSKIM---AFSEGVQVHGVVVKMGLVKDLFVANSLIHF 166

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YA  G+VD  + +F    +R++VSW ++++  S  +   EAV    +M   G++P+ V++
Sbjct: 167 YAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTM 226

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILI-DNSFVGSALVDMYCNCREVECGRRVFDFI 345
              + AC+ L+ L+ GK++    L  ++ +  N+ V +AL+DMY  C ++   R +FD  
Sbjct: 227 VCAISACAKLKDLELGKKV--CNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF 284

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           SDK + ++N +++ Y Q+    E L++  +M +  G  P+  TM S + AC +       
Sbjct: 285 SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQ-KGQRPDKVTMLSTIAACAQLGDLSVG 343

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           +  H +  + GL R   + NA++DMY + G+ E +  +FD M  +  V+WN++I G    
Sbjct: 344 KSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRD 403

Query: 466 GQHGDALMLLREM--------QNMEEEKNRNNVYDLDETVLRP------KPNSITLMTVL 511
           G+   AL +  EM          M     + ++++    +LR       K + +T++ + 
Sbjct: 404 GELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIA 463

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             CG L AL   K I+ Y  +N +  D+ +G+ALVDM+++CG    A RVF+ M  R+V 
Sbjct: 464 SACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVS 523

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            W   I    + G  +  +EL   M+ +     +VK ++  F+AL  A SH G V +G  
Sbjct: 524 AWTAAIRVKAVEGNAKGAIELFDEMLKQ-----DVKADDFVFVALLTAFSHGGYVDQGRQ 578

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
           LF+ M+  +G+ P   HY C+VDLLGRAG +E+A+ L+  MP + +    W S L ACR 
Sbjct: 579 LFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDV-IWGSFLAACRK 637

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+NVE    A + +  L P+    +VLLSNIY+SA  W+    VR +MKE G +K  G S
Sbjct: 638 HKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSS 697

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            IE    I +F +GD SH ++ Q+   L+ ++ R+ + GYVPDT+ VL +V+E+EKE LL
Sbjct: 698 SIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLL 757

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLA+A+G++NT  G  IRV KNLR+C+DCH   K +SK+  REI +RD  R+H F
Sbjct: 758 SRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFF 817

Query: 872 KNGTCSCGDYW 882
           K G CSC D+W
Sbjct: 818 KEGFCSCRDFW 828



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 181/655 (27%), Positives = 308/655 (47%), Gaps = 66/655 (10%)

Query: 49  LRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +R  A S   +EAI  Y+ M     I PDNF FP +L A + I   S G Q+H  VVK G
Sbjct: 93  IRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMG 152

Query: 108 YGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
             +  + VAN+L++ Y  CG  D+    KVFD + E++ VSW S+I           A+ 
Sbjct: 153 L-VKDLFVANSLIHFYAACGKVDLGR--KVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 209

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
            F  M+   VEP+  T+V    AC+ L     L LG++V      +G + NT ++NAL+ 
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACAKLK---DLELGKKVCNLMTELGVKSNTLVVNALLD 266

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY K G +   + +F  F D++LV +NTI+S+  Q+    E ++ L +M  +G +PD V+
Sbjct: 267 MYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 326

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           + S + AC+ L  L  GK  HAY  RN +  +DN  + +A++DMY  C + E   +VFD 
Sbjct: 327 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDN--ISNAIIDMYMKCGKREAACKVFDS 384

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +S+K +  WN++I G  ++   E AL +F +M E      N  + ++++ A V++  F +
Sbjct: 385 MSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE-----SNLVSWNTMIGAMVQASMFEE 439

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT----VSWNTMIT 460
              +       G+  DR     +      +G ++++K I+  +E  D          ++ 
Sbjct: 440 AIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVD 499

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            ++ C   GD L  +R  +NME+                     ++  T      A+   
Sbjct: 500 MFSRC---GDPLNAMRVFENMEKR-------------------DVSAWTAAIRVKAVEGN 537

Query: 521 AKGK-EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-----VRNVITWN 574
           AKG  E+    ++  +  D  V  AL+  ++  G ++  R++F  M         ++ + 
Sbjct: 538 AKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYG 597

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            ++   G  G  +E  +L+K+M         +KPN+V + +  AAC     V      F 
Sbjct: 598 CMVDLLGRAGLLEEAFDLMKSM--------PIKPNDVIWGSFLAACRKHKNVE-----FA 644

Query: 635 KMKDDYGIEPSPDH---YACVVDLLGRAGKVEDAYQL-INMMPPEFDKAGAWSSL 685
              D+   + +P+    +  + ++   AGK  D  ++ + M    F K    SS+
Sbjct: 645 NYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSI 699



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 38/365 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +  N  +EA+  + EM    ++P+       + A A ++DL LGK++   +
Sbjct: 190 SWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM 249

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G   S+  V N L++MY KCG DM+ V ++FD  ++K+ V +N++++   + G    
Sbjct: 250 TELGVK-SNTLVVNALLDMYMKCG-DMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L     ML     P   T++S   AC+ L     L +G+  H    R G E    I NA
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLG---DLSVGKSSHAYVFRNGLERLDNISNA 364

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDR-------------------------------DLVSW 251
           ++ MY K G+ + A  +F S  ++                               +LVSW
Sbjct: 365 IIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSW 424

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           NT++ ++ Q   F EA+  LR+M  +GIK D V++  +  AC +L  LD  K I+ Y  +
Sbjct: 425 NTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEK 484

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           NDI ID   +G+ALVDM+  C +     RVF+ +  + ++ W A I         + A+ 
Sbjct: 485 NDIHIDMQ-LGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIE 543

Query: 372 LFIKM 376
           LF +M
Sbjct: 544 LFDEM 548


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/663 (37%), Positives = 364/663 (54%), Gaps = 71/663 (10%)

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           +N  +A + +   ++ A+ +F+    R  V+WNT++S  ++                   
Sbjct: 76  LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTK------------------- 116

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
                                 GK   A+ L + I   +S   + ++  Y     VE   
Sbjct: 117 --------------------VAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAAL 156

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             F+ +  K IA WN +I+G+ QN   ++A  LF  M E      N  + S+++   V  
Sbjct: 157 AFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPE-----KNGVSWSAMISGYVEH 211

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                 E ++ +   +G+ +   V+ A++  Y + G++E+++ IF  M V++ V+WN+MI
Sbjct: 212 GDLEAAEELYKN---VGM-KSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMI 267

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY    +  D L + + M                    R +PN ++L +VL GC  LSA
Sbjct: 268 AGYVENCRAEDGLKVFKTMIES-----------------RVRPNPLSLSSVLLGCSNLSA 310

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  G+++H    ++ L+ D    ++L+ MY KCG L+ A ++F  MP ++VI+WN +I  
Sbjct: 311 LPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISG 370

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           Y  HG G++ L L   M     R G +KP+ +TF+A+  AC+H+G V  G+  F  MK +
Sbjct: 371 YAQHGAGRKALHLFDKM-----RNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKE 425

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           +GIE  P HY CV+DLLGRAG++++A  LI  MP +   A  + +LLGACRIH+N+++ E
Sbjct: 426 FGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK-PHAAIYGTLLGACRIHKNLDLAE 484

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
            AA+NL  L+P  A+ YV L+NIY++   WD+   VRK MKE  V K PG SWIE     
Sbjct: 485 FAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVT 544

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           H+F + D  H +   +H  L  L  +M+  GYVPD    LH+V EE KE LL  HSEKLA
Sbjct: 545 HEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLA 604

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           IAFG++ T PGT IRV KNLRVC DCH+A KFIS IE REII+RD  RFHHF+NG CSCG
Sbjct: 605 IAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCG 664

Query: 880 DYW 882
           DYW
Sbjct: 665 DYW 667



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 173/360 (48%), Gaps = 32/360 (8%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT+++ Y K    + + +++FD+I E D VS+N M+    R    + AL  F  M   ++
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDI 167

Query: 177 EP---------------SSFTLVSV---------ALACSNLSRRDGLRLGRQVHGNSLRV 212
                             +F L SV         +   S       L    +++ N   V
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKN---V 224

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
           G  +  +  A++  Y K G+V+ A+ +F+    ++LV+WN++++   +N +  + +   +
Sbjct: 225 GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M    ++P+ +S++SVL  CS+L  L  G+++H    ++ +  D +   ++L+ MYC C
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTT-ACTSLISMYCKC 343

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            +++   ++F  +  K +  WNAMI+GY Q+    +AL LF KM     + P+  T  +V
Sbjct: 344 GDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRN-GTMKPDWITFVAV 402

Query: 393 VPACVRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           + AC  +  F D    +  ++K   G+         ++D+  R GR++ + ++  +M  +
Sbjct: 403 ILACNHA-GFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 195/457 (42%), Gaps = 70/457 (15%)

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V++  T+ +    C  D+     VF++++ +  V+WN+M+                    
Sbjct: 74  VSLNKTIASFVRAC--DLESARNVFEKMSVRTTVTWNTML-------------------- 111

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGR 232
                 S +T V+  +              ++ H    ++ E ++   N ++  Y +   
Sbjct: 112 ------SGYTKVAGKV--------------KEAHELFDKIPEPDSVSYNIMLVCYLRSYG 151

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           V+ A   F     +D+ SWNT++S  +QN +  +A      M     + +GVS ++++  
Sbjct: 152 VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISG 207

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
                 L+  +E++      ++ + +  V +A++  Y    +VE   R+F  ++ K +  
Sbjct: 208 YVEHGDLEAAEELY-----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVT 262

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN+MI GY +N   E+ L +F  M E + + PN  ++SSV+  C    A P    +H   
Sbjct: 263 WNSMIAGYVENCRAEDGLKVFKTMIE-SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLV 321

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
            K  L +D     +L+ MY + G ++ +  +F +M  +D +SWN MI+GY   G    AL
Sbjct: 322 SKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKAL 381

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L  +M+N                    KP+ IT + V+  C     +  G +      +
Sbjct: 382 HLFDKMRNGTM-----------------KPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424

Query: 533 NM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
              +    V  + ++D+  + G L+ A  +   MP +
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 50/274 (18%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           ++E+ R+E       + +  +  M  S ++P+  +  +VL   + +  L LG+Q+H  V 
Sbjct: 270 YVENCRAE-------DGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVS 322

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K        T   +L++MY KCG D+   +K+F  +  KD +SWN+MI+   + G    A
Sbjct: 323 KSPLS-KDTTACTSLISMYCKCG-DLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKA 380

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
           L  F  M    ++P   T V+V LAC++                                
Sbjct: 381 LHLFDKMRNGTMKPDWITFVAVILACNH-------------------------------- 408

Query: 225 AMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           A +  LG V   K++ K F  +   V +  ++  L +  +  EAV  +++M     KP  
Sbjct: 409 AGFVDLG-VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPF---KPHA 464

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
               ++L AC   + LD  +    +A RN + +D
Sbjct: 465 AIYGTLLGACRIHKNLDLAE----FAARNLLNLD 494



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY-GMHGEGQEVLELLK 594
           A+DVV  +  +  + +   L  AR VF+ M VR  +TWN ++  Y  + G+ +E  EL  
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD--HYACV 652
            +          +P+ V++  +      S  V   +  F KM       P  D   +  +
Sbjct: 130 KI---------PEPDSVSYNIMLVCYLRSYGVEAALAFFNKM-------PVKDIASWNTL 173

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNVEIGEIAAQNL 705
           +    + G+++ A+ L ++MP   +K G +WS+++     H ++E  E   +N+
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMP---EKNGVSWSAMISGYVEHGDLEAAEELYKNV 224


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 267/755 (35%), Positives = 419/755 (55%), Gaps = 36/755 (4%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           +NS+I      G    A+  F  M+ S + P  +T     L+    SR  G   G Q+HG
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTF-PFGLSVCAKSRDKGN--GIQIHG 157

Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
             +++    + F+ N+L+  YA+ G +D A+ +F    +R++VSW +++   ++ +   +
Sbjct: 158 LIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKD 217

Query: 267 AV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           AV +F R +    + P+ V++  V+ AC+ LE L+TG++++ + +R+  +  N  + SAL
Sbjct: 218 AVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDF-IRDSGIEVNDLMISAL 276

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VDMY  C  ++  +R+FD      + L NAM + Y +    +EAL +   M + +G+ P+
Sbjct: 277 VDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMD-SGIRPD 335

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             +M S + +C +       +  HG+ ++ G      + NAL+DMY +  R + +  IFD
Sbjct: 336 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 395

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN------------RNNVYDL 493
            M  +  V+WN+++ GY   G+   A     E  N   EKN            + N+Y+ 
Sbjct: 396 RMSNKTVVTWNSIVAGYIENGEVDAAW----ETFNTMPEKNIVSWNTIISALVQENMYEE 451

Query: 494 DETVLR-------PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
              V            + +T+M++   CG L AL   K I+ Y  +N +  DV +G+ LV
Sbjct: 452 AIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLV 511

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DM+++CG    A  +F+ +  R+V  W   I A  M G  +  +EL   M+ +G     +
Sbjct: 512 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQG-----L 566

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           KP+ V FI    AC H G+V +G ++F  M+  +G+ P   HY C+VDLLGRAG +E+A 
Sbjct: 567 KPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEAL 626

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
           QLI  MP E +    W+SLL ACR+  NVE+   AA+ + +L P+    YVLLSN+Y+SA
Sbjct: 627 QLIKDMPTEPNDV-IWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASA 685

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
             W+    VR  MKE G+RK PG S I+   + H+F +GD SH +  ++   L+ LS+R 
Sbjct: 686 GRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRA 745

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
              G+VPD S VL +V+E+EK  +L  HSEKLA+AFG++++  GTTIR+ KNLRVC+ CH
Sbjct: 746 SDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCH 805

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
              KF SK+ +REIILRD  RFH  + G CSC D+
Sbjct: 806 SFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 171/576 (29%), Positives = 269/576 (46%), Gaps = 68/576 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A S   +EAIL +I M  S I PD + FP  L   A  +D   G QIH  ++K  Y
Sbjct: 105 IRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDY 164

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA- 167
               + V N+LV+ Y +CG ++    KVFD ++E++ VSW SMI   C + + + A +A 
Sbjct: 165 A-KDLFVQNSLVHFYAECG-ELDCARKVFDEMSERNVVSWTSMI---CGYARREFAKDAV 219

Query: 168 ---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              FRM+   +V P+S T+V V  AC+ L   + L  G +V+      G E N  +++AL
Sbjct: 220 DLFFRMVRDEDVIPNSVTMVCVISACAKL---EDLETGEKVYDFIRDSGIEVNDLMISAL 276

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K   +D AK LF  +   +L   N + S+  +     EA+  L  M   GI+PD 
Sbjct: 277 VDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDR 336

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILI-DNSFVGSALVDMYCNCREVECGRRVF 342
           +S+ S + +CS L  +  GK  H Y LRN     DN  + +AL+DMY  C   +   R+F
Sbjct: 337 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIF 394

Query: 343 DFISDKKIALWNAMITGYGQN-EYD------------------------------EEALM 371
           D +S+K +  WN+++ GY +N E D                              EEA+ 
Sbjct: 395 DRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIE 454

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +F  M+    +  +  TM S+  AC    A    + I+ +  K  +  D  +   L+DM+
Sbjct: 455 VFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMF 514

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           SR G  E + +IF+ +  RD  +W   I    + G    A+ L  EM             
Sbjct: 515 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEM------------- 561

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH--AYAIRNMLATDVVVGSALVDMY 549
            +++ +   KP+ +  +  L  C     + +GKEI      +  +   DV  G  +VD+ 
Sbjct: 562 -IEQGL---KPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG-CMVDLL 616

Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            + G L  A ++   MP   N + WN ++ A  + G
Sbjct: 617 GRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQG 652



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 197/393 (50%), Gaps = 36/393 (9%)

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           ++N++I GY  +   +EA++LFI+M   +G+ P+  T    +  C +S    +   IHG 
Sbjct: 100 MYNSLIRGYASSGLCKEAILLFIRMMN-SGISPDKYTFPFGLSVCAKSRDKGNGIQIHGL 158

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            IK+   +D +VQN+L+  Y+  G ++ ++ +FD+M  R+ VSW +MI GY       DA
Sbjct: 159 IIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDA 218

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           + L   M               DE V+   PNS+T++ V+  C  L  L  G++++ +  
Sbjct: 219 VDLFFRMVR-------------DEDVI---PNSVTMVCVISACAKLEDLETGEKVYDFIR 262

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
            + +  + ++ SALVDMY KC  ++ A+R+FD     N+   N +   Y   G  +E L 
Sbjct: 263 DSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALG 322

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA 650
           +L  M+  G     ++P+ ++ ++  ++CS    +  G     Y +++  G E   +   
Sbjct: 323 VLNLMMDSG-----IRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN--GFESWDNICN 375

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLF--L 707
            ++D+  +  + + A+++ + M  +      W+S++        +E GE+ AA   F  +
Sbjct: 376 ALIDMYMKCHRQDTAFRIFDRMSNK--TVVTWNSIVAG-----YIENGEVDAAWETFNTM 428

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            E ++ S   ++S +     ++++A++V   M+
Sbjct: 429 PEKNIVSWNTIISALVQE-NMYEEAIEVFHYMQ 460


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 279/780 (35%), Positives = 424/780 (54%), Gaps = 62/780 (7%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I+ KD   WNS+IA          AL  F  M    V  ++FT  ++  AC+ L R   L
Sbjct: 13  ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRR---L 68

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVS 256
               QVH    R+G   + F   AL+  Y K G    A  +F    +   D+VSW  ++S
Sbjct: 69  LPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 257 SLSQNDKFLEAVM-FLRQMALRG------IKPDGVSIASVLPACS---HLEMLDTGKEIH 306
           + S N    EA   F R   +RG         D VS+ +++ AC+       L  G  +H
Sbjct: 129 AYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNE 364
              ++    + ++ +G+++V MY  C++V    RVF+ I    + +  WN++I+G+  N 
Sbjct: 189 GLVVKYGFGV-STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNG 247

Query: 365 YDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK----LGLG 418
             E AL  F  M  E  + + PN  T+ +++ +C           +H +       L + 
Sbjct: 248 EAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA 307

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           +D  V  AL+DM++R G + +++ IFD +E ++ V W+ MI GY       +AL L R+M
Sbjct: 308 KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM 367

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                      + + +   +  KPN++TL++V+  C  L A      IH YA+   L  D
Sbjct: 368 -----------LMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQD 416

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLM--PVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
             + SAL+DM AKCG +   R+VF  M    R V++W+ +I A G+HGEG+  LEL   M
Sbjct: 417 ARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                R G  +PNE+T+I++ +ACSH+G+V +G   F  M+ DYG+ P+  HYAC+VDLL
Sbjct: 477 -----RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLL 531

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG +++A+ +I  MP + D A  W SLL AC +H N ++GEI  + +  L+ +   H+
Sbjct: 532 GRAGHLDEAHNVILNMPIKADLA-LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLL+N+Y  A  WD  + +R +++  G+RK PG S+IE G+E++ F+A D SH +SE ++
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIY 650

Query: 777 GFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETLL--CG-HSEKLAIAFGIL------- 825
             L+ L ER+RK   YV +T     NV + +   L+  C  HSE+LAIAFG++       
Sbjct: 651 KELDGLDERVRKAAKYVTETGL---NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHST 707

Query: 826 ---NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              +    T IR+ KNLRVC DCH  TK +SK+  RE+I+RD  RFHHF++G CSCGDYW
Sbjct: 708 CSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 276/569 (48%), Gaps = 56/569 (9%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           SL ++  +   + A+  +  M    +  +NF FPA+LKA A ++ L    Q+HA++ + G
Sbjct: 23  SLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLG 82

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLAL 165
                 + A  LV+ YGKCG   +   +VFD + E   D VSW ++I+     G  D A 
Sbjct: 83  LAADRFSAA-ALVDAYGKCGHAYYAA-QVFDEMPEGSVDVVSWTALISAYSSNGCVDEAF 140

Query: 166 EAFRMML----YSNVEPSSFTLVSVAL---ACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            AF  M     +   E     +VS+     AC+     + LR G  VHG  ++ G   +T
Sbjct: 141 XAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVST 200

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            + N+++ MY+    V  A  +F     E RD+VSWN+++S    N +   A+     M 
Sbjct: 201 HLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMV 260

Query: 276 LRG---IKPDGVSIASVLPACSHLEMLDTGKEIHAY-ALRNDILI--DNSFVGSALVDMY 329
             G   ++P+ V++ ++L +C+ L  ++T   +H Y + R+  L+   +  V +AL+DM+
Sbjct: 261 SEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMH 320

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM---EEVAG--LWP 384
             C  +   R +FD +  K +  W+AMI GY Q    EEAL LF +M     + G  + P
Sbjct: 321 ARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKP 380

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           NA T+ SV+ AC R  A      IH +A+  GL +D  + +AL+DM ++ G IE  + +F
Sbjct: 381 NAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVF 440

Query: 445 DDME--VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
            +M+   R  VSW++MI    I G+   AL L  EM        R   Y+         P
Sbjct: 441 SEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM--------RTGGYE---------P 483

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLN 556
           N IT ++VL  C     + +GK        N +  D  +       + LVD+  + G L+
Sbjct: 484 NEITYISVLSACSHAGLVEQGKSCF-----NSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 557 FARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            A  V   MP++ ++  W  ++ A  +HG
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHG 567


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/760 (34%), Positives = 421/760 (55%), Gaps = 34/760 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +   ++     EA++ ++++ R S   P+ F   +V++A   +  +  G Q+H  
Sbjct: 95  TWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGF 154

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV+ G+    V V  +L++ Y K G ++ +   VFD+++EK  V+W ++IA   + G+  
Sbjct: 155 VVRSGFD-QDVYVGTSLIDFYSKNG-NIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 212

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           ++LE F  M  +NV P  + + SV  ACS L   +G   G+Q+H   LR G E +  ++N
Sbjct: 213 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG---GKQIHAYVLRRGTEMDVSVVN 269

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+  Y K  RV   + LF     ++++SW T++S   QN    EA+    +M   G KP
Sbjct: 270 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKP 329

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           DG +  SVL +C   E L+ G+++HAY ++ ++  D  FV + L+DMY     +   ++V
Sbjct: 330 DGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDE-FVKNGLIDMYAKSNLLIDAKKV 388

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD ++++ +  +NAMI GY   E   EAL LF +M  V    P+  T  S++       A
Sbjct: 389 FDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR-VRLFPPSLLTFVSLLGVSASLFA 447

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IHG  IK G+  D +  +AL+D+YS+   ++ ++ +F++M  +D V WN M  G
Sbjct: 448 LELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFG 507

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           YT   ++ +AL L   +Q                   R KPN  T   ++     L++L 
Sbjct: 508 YTQHLENEEALKLYSTLQ-----------------FSRQKPNEFTFAALITAASNLASLR 550

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G++ H   ++  L     V +ALVDMYAKCG +  AR++F+    R+V+ WN +I  + 
Sbjct: 551 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA 610

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HGE +E L + + M+ EG     ++PN VTF+A+ +ACSH+G V +G++ F  M   +G
Sbjct: 611 QHGEAEEALGMFREMMKEG-----IQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FG 664

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I+P  +HYACVV LLGR+GK+ +A + I  MP E   A  W SLL ACRI  NVE+G+ A
Sbjct: 665 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIE-PAAIVWRSLLSACRIAGNVELGKYA 723

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+     +P  +  Y+LLSNI++S  +W     VR +M    V KEPG SWIE  ++++ 
Sbjct: 724 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNV 783

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
           F+A D +H++++ +   L+ L + ++  GYVPD + +L N
Sbjct: 784 FIARDTTHREAD-IGSVLDILIQHIKGAGYVPDATALLMN 822



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 315/602 (52%), Gaps = 34/602 (5%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           +++P    F  +L+       +   K IH  ++  G   S   +AN L+N+  K  SD  
Sbjct: 22  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ-SDTFLANILINVCSK--SDRV 78

Query: 132 DVYKV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALA 189
           D  +V FD++  K+ ++W+SM++   + G  + AL  F  +   S   P+ F L SV  A
Sbjct: 79  DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRA 138

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C+ L     +  G Q+HG  +R G + + ++  +L+  Y+K G +++A+ +F    ++  
Sbjct: 139 CTQLGV---VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTA 195

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           V+W TI++  ++  +   ++    QM    + PD   ++SVL ACS LE L+ GK+IHAY
Sbjct: 196 VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAY 255

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            LR    +D S V + L+D Y  C  V+ GR++FD +  K I  W  MI+GY QN +D E
Sbjct: 256 VLRRGTEMDVSVV-NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 314

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A+ LF +M  + G  P+    +SV+ +C   EA      +H + IK  L  D +V+N L+
Sbjct: 315 AMKLFGEMNRL-GWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY++   +  +K +FD M  ++ +S+N MI GY+   +  +AL L  EM+         
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR--------- 424

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                    L P P+ +T +++L    +L AL   K+IH   I+  ++ D+  GSAL+D+
Sbjct: 425 -------VRLFP-PSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDV 476

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y+KC  +  AR VF+ M  ++++ WN +   Y  H E +E L+L   +  + SR    KP
Sbjct: 477 YSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTL--QFSRQ---KP 531

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           NE TF AL  A S+   +  G   F+      G++  P     +VD+  + G +E+A ++
Sbjct: 532 NEFTFAALITAASNLASLRHGQQ-FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKM 590

Query: 669 IN 670
            N
Sbjct: 591 FN 592



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 242/470 (51%), Gaps = 27/470 (5%)

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG  +  G + +TF+ N L+ + +K  RVD+A+ +F     ++L++W+++VS  SQ   
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 264 FLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
             EA+M    +  + G  P+   +ASV+ AC+ L +++ G ++H + +R+    D  +VG
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD-VYVG 167

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           ++L+D Y     +E  R VFD +S+K    W  +I GY +      +L LF +M E   +
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE-TNV 226

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            P+   +SSV+ AC   E     + IH + ++ G   D  V N L+D Y++  R++  + 
Sbjct: 227 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 286

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD M V++ +SW TMI+GY       +A+ L  EM       NR          L  KP
Sbjct: 287 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM-------NR----------LGWKP 329

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +     +VL  CG+  AL +G+++HAY I+  L +D  V + L+DMYAK   L  A++VF
Sbjct: 330 DGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVF 389

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D+M  +NVI++N +I  Y    +  E LEL   M     R     P+ +TF++L    S 
Sbjct: 390 DVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM-----RVRLFPPSLLTFVSLLGV-SA 443

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           S    E     + +   +G+       + ++D+  +   V+DA  +   M
Sbjct: 444 SLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 493



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 29/376 (7%)

Query: 305 IHAYALRNDILID----NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           IH   +   I++     ++F+ + L+++      V+  R VFD +  K +  W++M++ Y
Sbjct: 44  IHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMY 103

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            Q  Y EEALM+F+ ++  +G  PN   ++SV+ AC +         +HG  ++ G  +D
Sbjct: 104 SQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 163

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            YV  +L+D YS+ G IE ++ +FD +  +  V+W T+I GYT CG+   +L L  +M+ 
Sbjct: 164 VYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMR- 222

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                   NV           P+   + +VL  C  L  L  GK+IHAY +R     DV 
Sbjct: 223 ------ETNVV----------PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 266

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           V + L+D Y KC  +   R++FD M V+N+I+W  +I  Y  +    E ++L   M   G
Sbjct: 267 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 326

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRA 659
                 KP+     ++  +C     + +G  +  Y +K +  +E        ++D+  ++
Sbjct: 327 W-----KPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN--LESDEFVKNGLIDMYAKS 379

Query: 660 GKVEDAYQLINMMPPE 675
             + DA ++ ++M  +
Sbjct: 380 NLLIDAKKVFDVMAEQ 395



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 24/296 (8%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           ++  L P     ++++   +        + IHG  I  GL  D ++ N L+++ S+  R+
Sbjct: 19  QIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRV 78

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + ++ +FD M  ++ ++W++M++ Y+  G   +ALM+  ++Q    E             
Sbjct: 79  DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGE------------- 125

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               PN   L +V+  C  L  + KG ++H + +R+    DV VG++L+D Y+K G +  
Sbjct: 126 ---HPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 182

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VFD +  +  +TW  II  Y   G     LEL   M     R   V P+     ++ 
Sbjct: 183 ARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQM-----RETNVVPDRYVVSSVL 237

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +ACS    +  G  +  Y ++   G E        ++D   +  +V+   +L + M
Sbjct: 238 SACSMLEFLEGGKQIHAYVLRR--GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 291


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/580 (40%), Positives = 347/580 (59%), Gaps = 25/580 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K++HA      I I +  V + L+ M    +++     +F+ + ++    W+ MI G+ +
Sbjct: 20  KQVHAQVTTTGI-IHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVK 78

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N   E     F ++   AG  P+  ++  V+ AC  +        IH   +K GL  D +
Sbjct: 79  NGDYERCFQTFRELIR-AGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNF 137

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V + L+DMY++ G I+ +K +FD M  +D V+   MI GY  CG+  ++ +L  +M+   
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR-- 195

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                      D  V    P+ + ++T++  C  L A+ K + +H Y      + DV +G
Sbjct: 196 -----------DGFV----PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG 240

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +A++DMYAKCG ++ +R +FD M  +NVI+W+ +I AYG HG+G+E LEL   M+  G  
Sbjct: 241 TAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSG-- 298

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              + PN +TFI+L  ACSH+G+V +G+ LF  M   YG+ P   HY C+VDLLGRAG++
Sbjct: 299 ---IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           + A +LI  M  E D+ G W + LGACRIH+ V++ E AA+ L  L+     HY+LLSNI
Sbjct: 356 DQALRLIENMEVEKDE-GIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNI 414

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y++A  W     +R  M +  ++K PG +WIE  + I++F AGD SH +S +++  L++L
Sbjct: 415 YANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSL 474

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           S+++   GYVPDT+ VLH+V+EE K  +L  HSEKLAIAFG++ TP GT IR+ KNLRVC
Sbjct: 475 SQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVC 534

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH   K +S I  R+II+RD  RFHHFK G CSCGDYW
Sbjct: 535 GDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 189/362 (52%), Gaps = 10/362 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HA V   G  +  + VAN L+ M  K   D+   + +F+++ E+D VSW+ MI    
Sbjct: 20  KQVHAQVTTTGI-IHDLIVANKLLYMCAK-HKDLVTAHLLFNKMEERDPVSWSVMIGGFV 77

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           + G ++   + FR ++ +  +P +F+L  V  AC +     GL +GR +H   L+ G   
Sbjct: 78  KNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM---GLIMGRLIHSTVLKNGLHL 134

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ + L+ MYAK G +D+AK LF     +DLV+   +++  ++  K  E+ +   QM 
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR 194

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  PD V++ +++ AC+ L  ++  + +H Y       +D   +G+A++DMY  C  +
Sbjct: 195 RDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVE-LGTAMIDMYAKCGSI 253

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  R +FD +  K +  W+AMI  YG +    EAL LF  M   +G+ PN  T  S++ A
Sbjct: 254 DSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN-SGIIPNRITFISLLYA 312

Query: 396 CVRSEAFPDKEGIHG-HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTV 453
           C  +    D   +    ++  G+  D      ++D+  R GR++ +  + ++MEV +D  
Sbjct: 313 CSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEG 372

Query: 454 SW 455
            W
Sbjct: 373 IW 374



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 218/506 (43%), Gaps = 84/506 (16%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVD 234
           ++P  F  +S    C N+ +       +QVH      G  +  I+ N L+ M AK   + 
Sbjct: 1   MDPDFF--ISTLFKCRNIFQI------KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLV 52

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A  LF   E+RD VSW+ ++    +N  +       R++   G KPD  S+  V+ AC 
Sbjct: 53  TAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACR 112

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
               L  G+ IH+  L+N + +DN FV S LVDMY  C  ++  +++FD +  K +    
Sbjct: 113 DTMGLIMGRLIHSTVLKNGLHLDN-FVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRT 171

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI GY +     E+ +LF +M    G  P+   M ++V AC +  A      +H +   
Sbjct: 172 VMIAGYAECGKPNESWVLFDQMRR-DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCA 230

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
                D  +  A++DMY++ G I+ S+ IFD ME ++ +SW+ MI  Y   GQ  +AL L
Sbjct: 231 RRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALEL 290

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-----AY 529
              M              L+  ++   PN IT +++L  C     +  G ++      +Y
Sbjct: 291 FHMM--------------LNSGII---PNRITFISLLYACSHAGLVDDGLQLFSLMSVSY 333

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
            +R     DV   + +VD+  + G L+                               + 
Sbjct: 334 GVR----PDVKHYTCMVDLLGRAGRLD-------------------------------QA 358

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAAC---SHSGMVSEGMDLFYKMKDDYGIEPSP 646
           L L++NM        EV+ +E  + A   AC       +  +   L   ++       +P
Sbjct: 359 LRLIENM--------EVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQ-----TQNP 405

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMM 672
            HY  + ++   AG+ +D  ++ N+M
Sbjct: 406 GHYILLSNIYANAGRWKDVAKIRNLM 431



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 13/278 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  +     ++ E+ R+  +PDNF+ P V+KA      L +G+ IH+ V
Sbjct: 68  SWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTV 127

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
           +K G  L +  V +TLV+MY KCG  M D  K +FDR+ +KD V+   MIA     GK +
Sbjct: 128 LKNGLHLDNF-VCSTLVDMYAKCG--MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMN 221
            +   F  M      P    +V++  AC+ L   +  RL   VH     R    +  +  
Sbjct: 185 ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARL---VHDYVCARRYSLDVELGT 241

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A++ MYAK G +D ++ +F   E ++++SW+ ++ +   + +  EA+     M   GI P
Sbjct: 242 AMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIP 301

Query: 282 DGVSIASVLPACSHLEMLDTGKEIH-----AYALRNDI 314
           + ++  S+L ACSH  ++D G ++      +Y +R D+
Sbjct: 302 NRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDV 339



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 11/189 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E+ + + +M R    PD  A   ++ A A +  ++  + +H +V    Y L  V +   +
Sbjct: 185 ESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD-VELGTAM 243

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MY KCGS +    ++FDR+ +K+ +SW++MI      G+   ALE F MML S + P+
Sbjct: 244 IDMYAKCGS-IDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPN 302

Query: 180 SFTLVSVALACSNLSR-RDGLRLGRQV---HGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
             T +S+  ACS+     DGL+L   +   +G    V  +       ++ +  + GR+D 
Sbjct: 303 RITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHY-----TCMVDLLGRAGRLDQ 357

Query: 236 AKTLFKSFE 244
           A  L ++ E
Sbjct: 358 ALRLIENME 366


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/634 (37%), Positives = 365/634 (57%), Gaps = 33/634 (5%)

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN  +  L+    F E++   R M   G  PD  S   +L +C+ L +  +G+++H +  
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITGYGQNEYDEE 368
           +     +  FV +AL+ MYC C  V   R+VF+    S +    +NA+I+GY  N    +
Sbjct: 81  KGGCETE-PFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A  +F +M+E  G+  ++ TM  +VP C   E       +HG  +K GL  +  V N+ +
Sbjct: 140 AAYMFRRMKE-TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MY + G +E  + +FD+M V+  ++WN +I+GY+  G   D L L  +M++        
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-------- 250

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                  + + P P   TL++VL  C  L A   G E+      N    +V V +A + M
Sbjct: 251 -------SGVCPDP--FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YA+CG L  AR VFD+MPV+++++W  +I  YGMHG G+  L L  +M+  G     ++P
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-----IRP 356

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           +   F+ + +ACSHSG+  +G++LF  MK +Y +EP P+HY+C+VDLLGRAG++++A + 
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP E D A  W +LLGAC+IH+NV++ E+A   +   EP+   +YVL+SNIYS ++ 
Sbjct: 417 IESMPVEPDGA-VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
            +    +R  M+E   RK+PG S++E    +H FLAGD SH+Q+E++H  L+ L      
Sbjct: 476 QEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL------ 529

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
           E  V + +  +     EE  +    HSE+LAIAFGILN+ PGT I V KNLRVC DCH  
Sbjct: 530 ETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVF 589

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K +SKI  R+ ++RD  RFH+FK+G CSC DYW
Sbjct: 590 LKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 215/469 (45%), Gaps = 24/469 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A  + F E+I  Y  M RS   PD F+FP +LK+ A +     G+Q+H HV 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS--WNSMIATLCRFGKWD 162
           K G       V   L++MY KCG  + D  KVF+   +  Q+S  +N++I+      K  
Sbjct: 81  KGGCETEPF-VLTALISMYCKCGL-VADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A   FR M  + V   S T++ +   C+     + L LGR +HG  ++ G +    ++N
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCT---VPEYLWLGRSLHGQCVKGGLDSEVAVLN 195

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           + + MY K G V+  + LF     + L++WN ++S  SQN    + +    QM   G+ P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++ SVL +C+HL     G E+      N   + N FV +A + MY  C  +   R V
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAV 314

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  K +  W AMI  YG +   E  LMLF  M +  G+ P+      V+ AC  S  
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHS-G 372

Query: 402 FPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
             DK G+          KL  G + Y  + L+D+  R GR++ +    + M V  D   W
Sbjct: 373 LTDK-GLELFRAMKREYKLEPGPEHY--SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429

Query: 456 NTMITGYTICGQHGDALML-LREMQNMEEEKNRNNVYDLDETVLRPKPN 503
             ++     C  H +  M  L   + +E E N    Y L   +     N
Sbjct: 430 GALLGA---CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/700 (35%), Positives = 384/700 (54%), Gaps = 59/700 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  NAL++  A    V D + LF S  +RD VS+N +++  S       +V   R + 
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRAL- 136

Query: 276 LR--GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN-- 331
           LR   ++P  +++++++   S L     G  +H   LR       +FVGS LVDMY    
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLG-FGAYAFVGSPLVDMYAKMG 195

Query: 332 -----------------------------CREVECGRRVFDFISDKKIALWNAMITGYGQ 362
                                        C+ +E  + +F  + D+    W  M+TG  Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N    EAL +F +M    G+  +  T  S++ AC    A  + + IH +  +     + +
Sbjct: 256 NGLQLEALDVFRRMR-AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVF 314

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+DMYS+   I +++ +F  M  R+ +SW  MI GY   GQ+  +   +R    M+
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY---GQNACSEEAVRAFSEMQ 371

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            +                KP+  TL +V+  C  L++L +G + H  A+ + L   + V 
Sbjct: 372 MDG--------------IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +ALV +Y KCG +  A R+FD M   + ++W  ++  Y   G+ +E ++L + M+A G  
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-- 475

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              +KP+ VTFI + +ACS +G+V +G D F  M+ D+GI P  DHY C++DL  R+G+ 
Sbjct: 476 ---LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRF 532

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A + I  MP   D  G W++LL +CR+  N+EIG+ AA+NL   +P   + YVLL ++
Sbjct: 533 KEAEEFIKQMPHSPDAFG-WATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSM 591

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +++   W +   +R+ M++  V+KEPGCSWI++ +++H F A D SH  S +++  LE L
Sbjct: 592 HAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWL 651

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           + +M +EGY PD S VLH+V + +K  ++  HSEKLAIAFG++  P    IR+ KNLRVC
Sbjct: 652 NSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVC 711

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH ATKFISKI  R+I++RD  RFH F +GTCSCGD+W
Sbjct: 712 VDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 229/473 (48%), Gaps = 64/473 (13%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALAC 190
           D+ ++F  + E+D VS+N++I      G    +++ +R +L   +V P+  TL ++ +  
Sbjct: 97  DMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVA 156

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE----- 244
           S LS R    LG  VH   LR+G     F+ + L+ MYAK+G + DA+ +F+  E     
Sbjct: 157 SALSDR---ALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 245 --------------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                                     DRD ++W T+V+ L+QN   LEA+   R+M   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +  D  +  S+L AC  L  L+ GK+IHAY  R     DN FVGSALVDMY  CR +   
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRT-WYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  ++ + I  W AMI GYGQN   EEA+  F +M ++ G+ P+  T+ SV+ +C  
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTLGSVISSCAN 391

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +  +    H  A+  GL R   V NAL+ +Y + G IE +  +FD+M   D VSW  +
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +TGY    Q G A    +E  ++ E+   N +          KP+ +T + VL  C    
Sbjct: 452 VTGY---AQFGKA----KETIDLFEKMLANGL----------KPDGVTFIGVLSACSRAG 494

Query: 519 ALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMP 566
            + KG +       +M     +V      + ++D+Y++ G    A      MP
Sbjct: 495 LVEKGCDY----FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 210/460 (45%), Gaps = 56/460 (12%)

Query: 46  IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK 105
             S  S ARS Q   A+L         ++P      A++   + + D +LG  +H  V++
Sbjct: 120 FSSTGSPARSVQLYRALLR-----EESVRPTRITLSAMIMVASALSDRALGHSVHCQVLR 174

Query: 106 YGYGLSSVTVANTLVNMYGKCG--SDMWDVYK---------------------------- 135
            G+G  +  V + LV+MY K G   D   V++                            
Sbjct: 175 LGFGAYAF-VGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +F  + ++D ++W +M+  L + G    AL+ FR M    V    +T  S+  AC  L+ 
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALA- 292

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              L  G+Q+H    R   E N F+ +AL+ MY+K   +  A+ +F+    R+++SW  +
Sbjct: 293 --ALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAM 350

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    QN    EAV    +M + GIKPD  ++ SV+ +C++L  L+ G + H  AL +  
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG- 409

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L+    V +ALV +Y  C  +E   R+FD +S      W A++TGY Q    +E + LF 
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFE 469

Query: 375 KMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           KM    GL P+  T   V+ AC R+       + F   +  HG    +    D Y    +
Sbjct: 470 KM-LANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG----IVPIDDHY--TCM 522

Query: 428 MDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICG 466
           +D+YSR GR + ++     M    D   W T+++   + G
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 10/218 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    EA+ ++ EM    I+PD+F   +V+ + A +  L  G Q H   
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G  +  +TV+N LV +YGKCGS + D +++FD ++  DQVSW +++    +FGK   
Sbjct: 406 LVSGL-MRYITVSNALVTLYGKCGS-IEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI---M 220
            ++ F  ML + ++P   T + V  ACS    R GL      + +S++       I    
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACS----RAGLVEKGCDYFDSMQKDHGIVPIDDHY 519

Query: 221 NALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSS 257
             ++ +Y++ GR  +A+   K      D   W T++SS
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 279/780 (35%), Positives = 424/780 (54%), Gaps = 62/780 (7%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           I+ KD   WNS+IA          AL  F  M    V  ++FT  ++  AC+ L R   L
Sbjct: 13  ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRR---L 68

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR--DLVSWNTIVS 256
               QVH    R+G   + F   AL+  Y K G    A  +F    +   D+VSW  ++S
Sbjct: 69  LPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 257 SLSQNDKFLEAV-MFLRQMALRG------IKPDGVSIASVLPACS---HLEMLDTGKEIH 306
           + S N    EA   F R   +RG         D VS+ +++ AC+       L  G  +H
Sbjct: 129 AYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMITGYGQNE 364
              ++    + ++ +G+++V MY  C++V    RVF+ I    + +  WN++I+G+  N 
Sbjct: 189 GLVVKYGFGV-STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNG 247

Query: 365 YDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK----LGLG 418
             E AL  F  M  E  + + PN  T+ +++ +C           +H +       L + 
Sbjct: 248 EAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA 307

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           +D  V  AL+DM++R G + +++ IFD +E ++ V W+ MI GY       +AL L R+M
Sbjct: 308 KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM 367

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                      + + +   +  KPN++TL++V+  C  L A      IH YA+   L  D
Sbjct: 368 -----------LMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQD 416

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLM--PVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
             + SAL+DM AKCG +   R+VF  M    R V++W+ +I A G+HGEG+  LEL   M
Sbjct: 417 ARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                R G  +PNE+T+I++ +ACSH+G+V +G   F  M+ DYG+ P+  HYAC+VDLL
Sbjct: 477 -----RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLL 531

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG +++A+ +I  MP + D A  W SLL AC +H N ++GEI  + +  L+ +   H+
Sbjct: 532 GRAGHLDEAHNVILNMPIKADLA-LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLL+N+Y  A  WD  + +R +++  G+RK PG S+IE G+E++ F+A D SH +SE ++
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIY 650

Query: 777 GFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETLL--CG-HSEKLAIAFGIL------- 825
             L+ L ER+RK   YV +T     NV + +   L+  C  HSE+LAIAFG++       
Sbjct: 651 KELDGLDERVRKAAKYVTETGL---NVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHST 707

Query: 826 ---NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              +    T IR+ KNLRVC DCH  TK +SK+  RE+I+RD  RFHHF++G CSCGDYW
Sbjct: 708 CSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 278/569 (48%), Gaps = 56/569 (9%)

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           SL ++  +   + A+  +  M    +  +NF FPA+LKA A ++ L    Q+HA++ + G
Sbjct: 23  SLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLG 82

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK--DQVSWNSMIATLCRFGKWDLAL 165
                 + A  LV+ YGKCG   +   +VFD + E   D VSW ++I+     G  D A 
Sbjct: 83  LAADRFSAA-ALVDAYGKCGHAYYAA-QVFDEMPEGSVDVVSWTALISAYSSNGCVDEAF 140

Query: 166 EAFRMML----YSNVEPSSFTLVSVAL---ACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
           +AF  M     +   E     +VS+     AC+     + LR G  VHG  ++ G   +T
Sbjct: 141 KAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVST 200

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            + N+++ MY+    V  A  +F     E RD+VSWN+++S  + N +   A+     M 
Sbjct: 201 HLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMV 260

Query: 276 LRG---IKPDGVSIASVLPACSHLEMLDTGKEIHAY-ALRNDILI--DNSFVGSALVDMY 329
             G   ++P+ V++ ++L +C+ L  ++T   +H Y + R+  L+   +  V +AL+DM+
Sbjct: 261 SEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMH 320

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM---EEVAG--LWP 384
             C  +   R +FD +  K +  W+AMI GY Q    EEAL LF +M     + G  + P
Sbjct: 321 ARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKP 380

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           NA T+ SV+ AC R  A      IH +A+  GL +D  + +AL+DM ++ G IE  + +F
Sbjct: 381 NAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVF 440

Query: 445 DDME--VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
            +M+   R  VSW++MI    I G+   AL L  EM        R   Y+         P
Sbjct: 441 SEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM--------RTGGYE---------P 483

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLN 556
           N IT ++VL  C     + +GK        N +  D  +       + LVD+  + G L+
Sbjct: 484 NEITYISVLSACSHAGLVEQGKSCF-----NSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 557 FARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            A  V   MP++ ++  W  ++ A  +HG
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHG 567


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/620 (40%), Positives = 346/620 (55%), Gaps = 63/620 (10%)

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P  +S A V    + L ML  G ++HA+ L    L   + VGS +V  Y +  +++    
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRG-LQPTALVGSKMVAFYASSGDIDSSVS 126

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF+ I D                 Y     +L   +E ++ +W         +  CV   
Sbjct: 127 VFNGIGD-----------------YFTFPFVLKSSVELLS-VW---------MGKCV--- 156

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                   HG  +++GL  D YV  +L+ +Y + G I  +  +FD+M +RD  SWN ++ 
Sbjct: 157 --------HGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 208

Query: 461 GYTICGQHGDALMLLREM--QNMEEEKNRNNVYD-----------LDETVLRP---KPNS 504
           GYT  G    AL +   M  +N+       + Y             DE V      +PN 
Sbjct: 209 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 268

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           +T+M+VLP C  LS L +G++IH  A R  L ++  V  AL  MYAKCG L  AR  FD 
Sbjct: 269 VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 328

Query: 565 MPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           +    +N+I WN +I AY  +G G + +   + M+  G     ++P+++TF  L + CSH
Sbjct: 329 LNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG-----IQPDDITFTGLLSGCSH 383

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           SG+V  G+  F  M   Y I P  +HYACV DLLGRAG++ +A +L+  MP     +  W
Sbjct: 384 SGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPS-IW 442

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
            SLL ACR H+N+E+ E AA+ LF+LEP+   +YVLLSN+Y+ A  W +   +R  +K  
Sbjct: 443 GSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 502

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           G +K PGCSWIE   + H FL GD SH Q ++++ FLE L E+M+  GY PDTS VLH++
Sbjct: 503 GTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDI 562

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           +EEEKE  L  HSEKLA+AFGILNTP  T +RV KNLR+C DCH A  FIS+I  RE+I+
Sbjct: 563 SEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIV 622

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD+ RFHHFK G CSCGDYW
Sbjct: 623 RDINRFHHFKGGCCSCGDYW 642



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 41/263 (15%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D F FP VLK+   +  + +GK +H  +++ G     + VA +L+ +YGKCG ++ D  K
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD-LYVATSLIILYGKCG-EINDAGK 190

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN-------------------- 175
           VFD +T +D  SWN+++A   + G  D AL  F  M + N                    
Sbjct: 191 VFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQA 250

Query: 176 -------------VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
                        V P+  T++SV  AC+ LS    L  GRQ+H  + R+G   N  ++ 
Sbjct: 251 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST---LERGRQIHELACRMGLNSNASVLI 307

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE--DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           AL AMYAK G + DA+  F      +++L++WNT++++ +     L+AV   R+M   GI
Sbjct: 308 ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGI 367

Query: 280 KPDGVSIASVLPACSHLEMLDTG 302
           +PD ++   +L  CSH  ++D G
Sbjct: 368 QPDDITFTGLLSGCSHSGLVDVG 390



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 194/458 (42%), Gaps = 59/458 (12%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM-AMYAKLGRVDDA 236
           P    ++S A     L+  + L+LG QVH + L  G   T ++ + M A YA  G +D +
Sbjct: 65  PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSS 124

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM--FLRQMALR-GIKPD---GVSIASVL 290
            ++F    D     + T    L  + + L   M   +  + LR G++ D     S+  + 
Sbjct: 125 VSVFNGIGD-----YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILY 179

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
             C   E+ D GK      + +++ I +    +AL+  Y     ++    +F+ +  + I
Sbjct: 180 GKCG--EINDAGK------VFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 231

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
             W  MI+GY Q+   ++AL LF +M +E +G+ PN  T+ SV+PAC +         IH
Sbjct: 232 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 291

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQ 467
             A ++GL  +  V  AL  MY++ G +  ++  FD +    ++ ++WNTMIT Y   G 
Sbjct: 292 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 351

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEI 526
              A+   REM     +                 P+ IT   +L GC     +  G K  
Sbjct: 352 GLQAVSTFREMIQAGIQ-----------------PDDITFTGLLSGCSHSGLVDVGLKYF 394

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMH-- 583
           +  +    +   V   + + D+  + G L  A ++   MP+      W  ++ A   H  
Sbjct: 395 NHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRN 454

Query: 584 -------GEGQEVLE--------LLKNMVAEGSRGGEV 606
                       VLE        LL NM AE  R  EV
Sbjct: 455 LEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEV 492



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW   +   ++S   ++A+  + EM + D  ++P+     +VL A A +  L  G+QIH 
Sbjct: 233 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 292

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI--TEKDQVSWNSMIATLCRFG 159
              + G   S+ +V   L  MY KCGS + D    FD++   EK+ ++WN+MI     +G
Sbjct: 293 LACRMGLN-SNASVLIALTAMYAKCGS-LVDARNCFDKLNRNEKNLIAWNTMITAYASYG 350

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
               A+  FR M+ + ++P   T   +   CS+
Sbjct: 351 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH 383


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/679 (35%), Positives = 380/679 (55%), Gaps = 56/679 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F++ ++ +L+ WNT+    + +   + A+     M   G+ P+  +   +L +C+ 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 296 LEMLDTGKEIHAYALRN----DILIDNSFVG--------------------------SAL 325
           L+    G +IH + L+     D+ +  S +                           +AL
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           V  Y +   +E  R +FD I  K +  WNAMI+GY +    +EAL LF +M +   + P+
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK-TNVRPD 194

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            +TM +V+ A  RS +      +H      G G +  + NAL+D YS+ G +E +  +F 
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D +SWN +I GYT    + +AL+L +EM    E                  PN +
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE-----------------SPNDV 297

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFD 563
           T++++L  C  L A+  G+ IH Y  + +  +     + ++L+DMY+KCG +  A +VF+
Sbjct: 298 TMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFN 357

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            M  +++  WN +I  + MHG      ++   M     R  E+KP+++TF+ L +ACSH+
Sbjct: 358 SMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM-----RKNEIKPDDITFVGLLSACSHA 412

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           GM+  G  +F  M  +Y I P  +HY C++DLLG +G  ++A ++I+ M  E D    W 
Sbjct: 413 GMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGV-IWC 471

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           SLL AC++H NVE+GE  AQNLF +EP+    YVLLSNIY++A  W++   +R  + + G
Sbjct: 472 SLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKG 531

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           ++K PGCS IE    +H+F+ GD  H ++ +++G LE +   +++ G+VPDTS VL  + 
Sbjct: 532 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEME 591

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           EE KE  L  HSEKLAIAFG+++T P T + + KNLRVC +CH+ATK ISKI  REII R
Sbjct: 592 EEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 651

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF++G CSC DYW
Sbjct: 652 DRTRFHHFRDGVCSCNDYW 670



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 225/474 (47%), Gaps = 48/474 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S     A+  Y+ M    + P+++ FP +LK+ A ++    G QIH HV+
Sbjct: 31  WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
           K GY L  + V  +L++MY +    + D +KVFDR                         
Sbjct: 91  KLGYELD-LYVHTSLISMYVQ-NERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESA 148

Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                 I  KD VSWN+MI+     G +  ALE F+ M+ +NV P   T+V+V  A +  
Sbjct: 149 RNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASA-- 206

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
            R   + LGRQVH      G   N  I+NAL+  Y+K G ++ A  LF     +D++SWN
Sbjct: 207 -RSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWN 265

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++   +  + + EA++  ++M   G  P+ V++ S+L AC+HL  +D G+ IH Y  + 
Sbjct: 266 ILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S + ++L+DMY  C ++E   +VF+ +  K +  WNAMI G+  +     A  
Sbjct: 326 LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFD 385

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH---GHAIKLGLGRDRYVQNALM 428
           +F +M +   + P+  T   ++ AC  +        I     H  K+    + Y    ++
Sbjct: 386 IFSRMRK-NEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY--GCMI 442

Query: 429 DMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           D+    G  + ++ +   M +  D V W +++     C  HG+  +  +  QN+
Sbjct: 443 DLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA---CKMHGNVELGEKFAQNL 493



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 219/486 (45%), Gaps = 60/486 (12%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-S 194
           VF+ I E + + WN+M            AL+ +  M+   + P+S+T   +  +C+ L +
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY-------------------------- 227
            ++GL    Q+HG+ L++G E + ++  +L++MY                          
Sbjct: 79  SKEGL----QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTA 134

Query: 228 -----AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
                A  G ++ A+ +F     +D+VSWN ++S   +   + EA+   ++M    ++PD
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPD 194

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++ +V+ A +    ++ G+++H++ + +     N  + +AL+D Y  C E+E    +F
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSW-IADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +S K +  WN +I GY      +EAL+LF +M   +G  PN  TM S++ AC    A 
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLR-SGESPNDVTMLSILHACAHLGAI 312

Query: 403 PDKEGIHGHAIKL--GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                IH +  K   G+     ++ +L+DMYS+ G IE +  +F+ M  +   +WN MI 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G+ + G+   A  +   M+  E                  KP+ IT + +L  C     L
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNE-----------------IKPDDITFVGLLSACSHAGML 415

Query: 521 AKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
             G+ I      N   T  +     ++D+    G    A  +   M +  + + W  ++ 
Sbjct: 416 DLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLK 475

Query: 579 AYGMHG 584
           A  MHG
Sbjct: 476 ACKMHG 481



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  ++EA+  + EM +++++PD      V+ A A    + LG+Q+H+ +
Sbjct: 162 SWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWI 221

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L++ Y KCG +M     +F  ++ KD +SWN +I        +  
Sbjct: 222 ADHGFG-SNLKIVNALIDFYSKCG-EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKE 279

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++S+  AC++L   D   +GR +H      L+     + + 
Sbjct: 280 ALLLFQEMLRSGESPNDVTMLSILHACAHLGAID---IGRWIHVYIDKRLKGVTNASSLR 336

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MY+K G ++ A  +F S   + L +WN ++   + + +   A     +M    IK
Sbjct: 337 TSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIK 396

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 397 PDDITFVGLLSACSHAGMLDLGRHI 421



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 104/232 (44%), Gaps = 38/232 (16%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L +A  VF+ +   N++ WN +   + +  +    L+L   M++ G     + PN  TF 
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLG-----LLPNSYTFP 67

Query: 615 ALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            L  +C+      EG+ +  + +K  Y ++     +  ++ +  +  ++EDA+++     
Sbjct: 68  FLLKSCAKLKASKEGLQIHGHVLKLGYELDLYV--HTSLISMYVQNERLEDAHKV----- 120

Query: 674 PEFDKAG-----AWSSLLGACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSA 726
             FD++      ++++L+        +E    +A+N+F   P  DV S   ++S  Y   
Sbjct: 121 --FDRSSHRDVVSYTALVTGYASRGYIE----SARNMFDEIPVKDVVSWNAMISG-YVET 173

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGC-----------SWIEFGDEIHKFLAGDG 767
             + +A+++ K+M +  VR +                IE G ++H ++A  G
Sbjct: 174 GNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG 225


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/581 (39%), Positives = 346/581 (59%), Gaps = 24/581 (4%)

Query: 303 KEIHAYALRNDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           K+IHA+++R+ +   N  F    +  +      +    ++F+ I    I  WN MI G+ 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++E    A+ LF +M   + + P+  T   +  A  +       EGIH   ++ G    R
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +VQN+L+ MYS +G +  +  +F+ M  RD V+WN++I G+ + G   +AL L REM + 
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
             E                 P+  T++++L  C  L ALA G+ +H Y ++  L  +   
Sbjct: 232 GVE-----------------PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +AL+D+Y+KCG    A++VFD M  R+V++W  +I+   ++G G E L+L   +  +G 
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG- 333

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               +KP+E+TF+ +  ACSH GM+ EG + F +MK++YGI P  +H+ C+VDLL RAGK
Sbjct: 334 ----LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           V DAY  I  MP     A  W +LLGAC IH ++E+GE+A   +  LE   +  +VLLSN
Sbjct: 390 VGDAYDYIRNMPVP-PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSN 448

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           +Y+S + W    +VRK M   GV+K PG S +E  + +++F+ GD SH QSE+ +  L  
Sbjct: 449 LYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAK 508

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           +++ ++ EGYVP T  VL ++ EEEKET L  H+EK+AIAF ++NTPPGT IR+ KNLRV
Sbjct: 509 ITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRV 568

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH A K ISK+  REII+RD  RFHHFK+G+CSC DYW
Sbjct: 569 CADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +R  A S     A+  + +M   S I PD   FP + KAVA + D+SLG+ IH+ 
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV+ G+  S   V N+LV+MY   GS +   Y+VF+ ++ +D+V+WNS+I      G  +
Sbjct: 162 VVRNGFD-SLRFVQNSLVHMYSVLGS-LXSAYQVFEIMSYRDRVAWNSVINGFALNGMPN 219

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL  +R M    VEP  FT+VS+  AC  L     L LG +VH   ++VG   N    N
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELG---ALALGERVHMYMVKVGLVQNQHASN 276

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ +Y+K G   DA+ +F   E+R +VSW +++  L+ N    EA+    ++  +G+KP
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 282 DGVSIASVLPACSHLEMLDTG 302
             ++   VL ACSH  MLD G
Sbjct: 337 SEITFVGVLYACSHCGMLDEG 357



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 11/392 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIHA  +++G    +      L+       + M    ++F++I   +  +WN+MI    
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 157 RFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                  A+E F +M   S++ P + T   +  A + L     + LG  +H   +R G +
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLM---DVSLGEGIHSVVVRNGFD 168

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
              F+ N+L+ MY+ LG +  A  +F+    RD V+WN++++  + N    EA+   R+M
Sbjct: 169 SLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G++PDG ++ S+L AC  L  L  G+ +H Y ++   L+ N    +AL+D+Y  C  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG-LVQNQHASNALLDLYSKCGN 287

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               ++VFD + ++ +  W ++I G   N    EAL LF ++E   GL P+  T   V+ 
Sbjct: 288 FRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER-QGLKPSEITFVGVLY 346

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEV-RD 451
           AC       D+   +   +K   G    +++   ++D+  R G++  +     +M V  +
Sbjct: 347 ACSHC-GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            V W T++   TI G      +   E+Q +E+
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQ 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   +   A +    EA+  Y EM    ++PD F   ++L A   +  L+LG+++
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H ++VK G  + +   +N L+++Y KCG +  D  KVFD + E+  VSW S+I  L   G
Sbjct: 260 HMYMVKVGL-VQNQHASNALLDLYSKCG-NFRDAQKVFDEMEERSVVSWTSLIVGLAVNG 317

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
             + AL+ F  +    ++PS  T V V  ACS+    D
Sbjct: 318 LGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLD 355



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 39/189 (20%)

Query: 514 CGALSALAKGKEIHAYAIRNMLAT-----DVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           CG  S+ +K K+IHA++IR+ +       +  +  ALV + A    ++FA ++F+ +   
Sbjct: 44  CG--SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAP 98

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS------- 621
           N+ TWN +I  +         +EL   M A  S    + P+  TF  LF A +       
Sbjct: 99  NIFTWNTMIRGFAESENPSPAVELFSQMHAASS----ILPDTHTFPFLFKAVAKLMDVSL 154

Query: 622 ----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
               HS +V  G D    +++             +V +    G +  AYQ+  +M   + 
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNS------------LVHMYSVLGSLXSAYQVFEIM--SYR 200

Query: 678 KAGAWSSLL 686
              AW+S++
Sbjct: 201 DRVAWNSVI 209


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/765 (34%), Positives = 412/765 (53%), Gaps = 67/765 (8%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS-N 192
           Y++F  I   +    N+M+    +      A+  ++ ML SNV   ++T   +  +CS  
Sbjct: 80  YQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIR 139

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L+  DG    + +  + L+VG + + +I N L+ MYA  G + DA+ +F      D+VSW
Sbjct: 140 LAEFDG----KCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N++++                           V + +V          +  K+++     
Sbjct: 196 NSMLAGY-------------------------VLVGNV----------EEAKDVYDRMPE 220

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            +++  NS     ++ ++     VE   ++F+ +  K +  W+A+I+ Y QNE  EEAL+
Sbjct: 221 RNVIASNS-----MIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALI 275

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M    G+  +   + SV+ AC R       + +HG  +K+G+     +QNAL+ MY
Sbjct: 276 LFKEMN-ANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMY 334

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN----------- 480
           S    +  ++ +F +    D +SWN+MI+GY  CG+   A  L   M +           
Sbjct: 335 SSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMIS 394

Query: 481 --MEEEKNRNNVYDLDETVLR-PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
              ++++    +    E  +   KP+   L++V+  C  L+AL +GK IHAY  +N L  
Sbjct: 395 GYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI 454

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           ++++G+ L++MY K GC+  A  VF  +  + V TWN +I+   M+G   + L+    M 
Sbjct: 455 NIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMK 514

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G     V PNE+TF+A+  AC H G+V EG   F  M  ++ I P+  HY C+VDLLG
Sbjct: 515 EHG-----VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLG 569

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG +++A +LI  MP   D    W +LLGAC+ + + E GE   + L  L PD     V
Sbjct: 570 RAGMLKEAEELIESMPMAPD-VSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNV 628

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LLSNIY+S   W   ++VR  M++ GV K PGCS IE    +H+FLAGD +H Q+E +  
Sbjct: 629 LLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEH 688

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            L+ ++++++ EGY PDT  V  +++EEEKET L  HSEKLAIAFG++   P T IR+ K
Sbjct: 689 MLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVK 748

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLR+CNDCH A K ISK  +REI++RD  RFHHFK G+CSC DYW
Sbjct: 749 NLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 203/396 (51%), Gaps = 49/396 (12%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V  +N+++ ++GK G ++ +  K+F+ + +KD VSW+++I+   +   ++ AL  F+ M
Sbjct: 222 NVIASNSMIVLFGKKG-NVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEM 280

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA-- 228
             + +      ++SV  ACS L     +  G+ VHG  ++VG E    + NAL+ MY+  
Sbjct: 281 NANGIMVDEVVVLSVLSACSRLLV---VITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337

Query: 229 -----------------------------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
                                        K G ++ A+ LF S  D+D VSW+ ++S  +
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           Q D+F E ++  ++M + G KPD   + SV+ AC+HL  LD GK IHAY  +N + I N 
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI-NI 456

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            +G+ L++MY     VE    VF  + +K ++ WNA+I G   N   +++L  F +M+E 
Sbjct: 457 ILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE- 515

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI----KLGLGRDRYVQNALMDMYSRMG 435
            G+ PN  T  +V+ AC R     D+   H +++    K+G     Y    ++D+  R G
Sbjct: 516 HGVTPNEITFVAVLGAC-RHMGLVDEGHRHFNSMIQEHKIGPNIKHY--GCMVDLLGRAG 572

Query: 436 RIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
            ++ ++ + + M +  D  +W  ++     C ++GD
Sbjct: 573 MLKEAEELIESMPMAPDVSTWGALLGA---CKKYGD 605



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 37/291 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  + EA++ + EM  + I  D     +VL A + +  +  GK +H  V
Sbjct: 256 SWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLV 315

Query: 104 VKYGYGLSSVTVANTLVNMYG-------------------------------KCGSDMWD 132
           VK G   + V + N L++MY                                KCG ++  
Sbjct: 316 VKVGIE-TYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCG-EIEK 373

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FD + +KD VSW++MI+   +  ++   L  F+ M     +P    LVSV  AC++
Sbjct: 374 ARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTH 433

Query: 193 LSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L+  D G  +   +  N L++   N  +   L+ MY KLG V+DA  +FK  E++ + +W
Sbjct: 434 LAALDQGKWIHAYIRKNGLKI---NIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTW 490

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           N ++  L+ N    +++    +M   G+ P+ ++  +VL AC H+ ++D G
Sbjct: 491 NALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEG 541



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+ ++F E ++ + EM     +PD     +V+ A   +  L  GK IHA++
Sbjct: 388 SWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYI 447

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G  + ++ +  TL+NMY K G  + D  +VF  + EK   +WN++I  L   G  D 
Sbjct: 448 RKNGLKI-NIILGTTLINMYMKLGC-VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDK 505

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL----RVGEWNTFI 219
           +L+ F  M    V P+  T V+V  AC    R  GL      H NS+    ++G  N   
Sbjct: 506 SLKTFSEMKEHGVTPNEITFVAVLGAC----RHMGLVDEGHRHFNSMIQEHKIGP-NIKH 560

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
              ++ +  + G + +A+ L +S     D+ +W  ++ +
Sbjct: 561 YGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 38/229 (16%)

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKT--IFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           G  +D +  + L+   + +  I I+++  IF  +E  +    NTM+ GY        A+ 
Sbjct: 53  GFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIW 112

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           + + M              L+  V     ++ T   +   C    A   GK I  + ++ 
Sbjct: 113 VYKFM--------------LESNV---AADNYTYPILFQSCSIRLAEFDGKCIQDHVLKV 155

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
              +DV + + L++MYA CG L+ AR+VFD   V ++++WN ++  Y + G  +E  ++ 
Sbjct: 156 GFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVY 215

Query: 594 -----KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
                +N++A  S            I LF      G V E   LF +MK
Sbjct: 216 DRMPERNVIASNS-----------MIVLFGK---KGNVEEACKLFNEMK 250


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/679 (35%), Positives = 380/679 (55%), Gaps = 56/679 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F + ++ + + WNT++   + +   + A+     M   G+ P+  +   +L +C+ 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 296 LEMLDTGKEIHAYALR----NDILIDNSFVG--------------------------SAL 325
            +  + G++IH + L+     D+ +  S +                           +AL
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +  Y +   +   + +FD I  K +  WNAMI+GY +    +EAL LF +M +   + P+
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT-NVRPD 197

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             TM +V+ AC +S +      +H      G G +  + NAL+D+YS+ G++E +  +F+
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D VSWNT+I GYT    + +AL+L +EM    E                  PN +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES-----------------PNDV 300

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFD 563
           T++++LP C  L A+  G+ IH Y  + +  +     + ++L+DMYAKCG +  A +VF+
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            M  +++ +WN +I  + MHG      +L   M   G     ++P+++TF+ L +ACSHS
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG-----IEPDDITFVGLLSACSHS 415

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G +  G  +F  M  DY I P  +HY C++DLLG +G  ++A ++I  MP E D    W 
Sbjct: 416 GKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGV-IWC 474

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           SLL ACR H N+E+ E  A+NL  +EP+    YVLLSNIY++A  WD+   VR  +   G
Sbjct: 475 SLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKG 534

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           ++K PGCS IE   E+H+F+ GD  H ++ +++G LE +   + + G+VPDTS VL  + 
Sbjct: 535 MKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEME 594

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           EE KE  L  HSEKLAIAFG+++T PGT + + KNLRVC +CH+ATK +SKI  REII R
Sbjct: 595 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIAR 654

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF++G CSC D+W
Sbjct: 655 DRTRFHHFRDGVCSCNDFW 673



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 264/553 (47%), Gaps = 89/553 (16%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LR  A S+    A+  Y+ M    + P+++ FP +LK+ A  +    G+QIH HV+
Sbjct: 34  WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
           K GY    + V  +L++MY + G  + D +KVFDR                         
Sbjct: 94  KLGYE-PDLYVHTSLISMYAQNGR-LEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSA 151

Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                 I  KD VSWN+MI+     G +  ALE F+ M+ +NV P   T+V+V  AC+  
Sbjct: 152 QEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQ- 210

Query: 194 SRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           SR   + LGRQVH   +    G  N  I+NAL+ +Y+K G+V+ A  LF+    +D+VSW
Sbjct: 211 SR--SVELGRQVHSWIDDHGFGS-NLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSW 267

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           NT++   +  + + EA++  ++M   G  P+ V+I S+LPAC+HL  +D G+ IH Y  +
Sbjct: 268 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDK 327

Query: 312 NDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
               + N+  + ++L+DMY  C ++E   +VF+ +  K ++ WNAMI G+  +       
Sbjct: 328 KLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGF 387

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ------ 424
            LF +M +  G+ P+  T   ++ AC              H+ KL LGR  +        
Sbjct: 388 DLFSRMRK-NGIEPDDITFVGLLSAC-------------SHSGKLDLGRHIFKSMTQDYD 433

Query: 425 --------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD---AL 472
                     ++D+    G  + +K +   M +  D V W +++     C +HG+   A 
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKA---CRRHGNLELAE 490

Query: 473 MLLREMQNMEEEKN-----RNNVY----DLDETV-LRPKPNSITLMTVLPGCGALSALAK 522
              R +  +E E        +N+Y    + DE   +R   N   +  V PGC   S++  
Sbjct: 491 SFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKV-PGC---SSIEI 546

Query: 523 GKEIHAYAIRNML 535
             E+H + + + L
Sbjct: 547 DSEVHEFIVGDKL 559



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 139/265 (52%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  ++EA+  + EM +++++PD      VL A A  + + LG+Q+H+ +
Sbjct: 165 SWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWI 224

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG  +     +F+ ++ KD VSWN++I        +  
Sbjct: 225 DDHGFG-SNLKIVNALIDLYSKCG-QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 282

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T+VS+  AC++L   D   +GR +H      L+       + 
Sbjct: 283 ALLLFQEMLRSGESPNDVTIVSILPACAHLGAID---IGRWIHVYIDKKLKDVTNAPSLR 339

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A  +F S   + L SWN ++   + + +         +M   GI+
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH   LD G+ I
Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHI 424


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 400/716 (55%), Gaps = 60/716 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMA---MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   +++G  NT + ++ L+    +      +  A ++FK+ ++ +L+ WNT+    
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
           + +   + A+     M   G+ P+  +   VL +C+  +    G++IH + L+     D+
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
            +  S +                           +AL+  Y +   +E  +++FD I  K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNAMI+GY +    +EAL LF  M +   + P+ +TM +VV AC +S +      +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQV 288

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H      G G +  + NAL+D+YS+ G +E +  +F+ +  +D +SWNT+I GYT    +
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH 
Sbjct: 349 KEALLLFQEMLRSGE-----------------TPNDVTMLSILPACAHLGAIDIGRWIHV 391

Query: 529 YAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           Y  + +  +     + ++L+DMYAKCG +  A +VF+ +  +++ +WN +I  + MHG  
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               +L   M   G     ++P+++TF+ L +ACSHSGM+  G  +F  M  DY + P  
Sbjct: 452 DASFDLFSRMRKIG-----IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C++DLLG +G  ++A ++INMM  E D    W SLL AC++H NVE+GE  A+NL 
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV-IWCSLLKACKMHGNVELGESFAENLI 565

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +EP+    YVLLSNIY+SA  W++    R  + + G++K PGCS IE    +H+F+ GD
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H ++ +++G LE +   + K G+VPDTS VL  + EE KE  L  HSEKLAIAFG+++
Sbjct: 626 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 685

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 686 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 206/395 (52%), Gaps = 53/395 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+++ FP VLK+ A  +    G+QIH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
           K G  L  + V  +L++MY + G  + D +KVFD+                         
Sbjct: 162 KLGCDLD-LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                 I  KD VSWN+MI+     G +  ALE F+ M+ +NV P   T+V+V  AC   
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC--- 276

Query: 194 SRRDGLRLGRQVH--------GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           ++   + LGRQVH        G++L+       I+NAL+ +Y+K G ++ A  LF+    
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLK-------IVNALIDLYSKCGELETACGLFERLPY 329

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +D++SWNT++   +  + + EA++  ++M   G  P+ V++ S+LPAC+HL  +D G+ I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 306 HAYALRNDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           H Y  +    + N S + ++L+DMY  C ++E   +VF+ I  K ++ WNAMI G+  + 
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             + +  LF +M ++ G+ P+  T   ++ AC  S
Sbjct: 450 RADASFDLFSRMRKI-GIQPDDITFVGLLSACSHS 483



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 226/503 (44%), Gaps = 77/503 (15%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-----YGLSSVTVANTLVNMY 123
           + SD   D+      L  +   + L   + IHA ++K G     Y LS +     L   +
Sbjct: 22  SSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF 81

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
                 +     VF  I E + + WN+M            AL+ +  M+   + P+S+T 
Sbjct: 82  ----EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-- 240
             V  +C+   +    + G+Q+HG+ L++G + + ++  +L++MY + GR++DA  +F  
Sbjct: 138 PFVLKSCA---KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK 194

Query: 241 --------------------------KSFED---RDLVSWNTIVSSLSQNDKFLEAVMFL 271
                                     K F++   +D+VSWN ++S  ++   + EA+   
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS------AL 325
           + M    ++PD  ++ +V+ AC+    ++ G+++H +       ID+   GS      AL
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW-------IDDHGFGSNLKIVNAL 307

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +D+Y  C E+E    +F+ +  K +  WN +I GY      +EAL+LF +M   +G  PN
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPN 366

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKL--GLGRDRYVQNALMDMYSRMGRIEISKTI 443
             TM S++PAC    A      IH +  K   G+     ++ +L+DMY++ G IE +  +
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+ +  +   SWN MI G+ + G+   +  L   M+                  +  +P+
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK-----------------IGIQPD 469

Query: 504 SITLMTVLPGCGALSALAKGKEI 526
            IT + +L  C     L  G+ I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHI 492



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 141/265 (53%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  ++EA+  + +M +++++PD      V+ A A    + LG+Q+H  +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG ++     +F+R+  KD +SWN++I        +  
Sbjct: 293 DDHGFG-SNLKIVNALIDLYSKCG-ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++S+  AC++L   D   +GR +H      L+     + + 
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAID---IGRWIHVYIDKRLKGVTNASSLR 407

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A  +F S   + L SWN ++   + + +   +     +M   GI+
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHI 492


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/663 (37%), Positives = 363/663 (54%), Gaps = 71/663 (10%)

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           +N  +A + +   ++ A+ +F+    R  V+WNT++S  ++                   
Sbjct: 76  LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTK------------------- 116

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
                                 GK   A+ L + I   +S   + ++  Y     V+   
Sbjct: 117 --------------------VAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAAL 156

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             F+ +  K IA WN +I+G+ QN   ++A  LF  M E      N  + S+++   V  
Sbjct: 157 AFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPE-----KNGVSWSAMISGYVEH 211

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                 E ++ +   +G+ +   V+ A++  Y + G++E+++ IF  M V++ V+WN+MI
Sbjct: 212 GDLEAAEELYKN---VGM-KSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMI 267

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY    +  D L + + M                    R +PN ++L +VL GC  LSA
Sbjct: 268 AGYVENCRAEDGLKVFKTMIES-----------------RVRPNPLSLSSVLLGCSNLSA 310

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  G+++H    ++ L+ D    ++L+ MY KCG L+ A ++F  MP ++VITWN +I  
Sbjct: 311 LPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISG 370

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           Y  HG G++ L L   M     R G +KP+ +TF+A+  AC+H+G V  G+  F  MK +
Sbjct: 371 YAQHGAGRKALHLFDKM-----RNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKE 425

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           +GIE  P HY CV+DLLGRAG++++A  LI  MP     A  + +LLGACRIH+N+++ E
Sbjct: 426 FGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFT-PHAAIYGTLLGACRIHKNLDLAE 484

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
            AA+NL  L+P  A+ YV L+NIY++   WD+   VRK MKE  V K PG SWIE     
Sbjct: 485 FAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVT 544

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           H+F + D  H +   +H  L  L  +M+  GYVPD    LH+V EE KE LL  HSEKLA
Sbjct: 545 HEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLA 604

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           IAFG++ T PGT IRV KNLRVC DCH+A KFIS IE REII+RD  RFHHF+NG CSCG
Sbjct: 605 IAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCG 664

Query: 880 DYW 882
           DYW
Sbjct: 665 DYW 667



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 171/357 (47%), Gaps = 32/357 (8%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT+++ Y K    + + +++FD+I E D VS+N M+    R      AL  F  M   ++
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDI 167

Query: 177 EP---------------SSFTLVSV---------ALACSNLSRRDGLRLGRQVHGNSLRV 212
                             +F L SV         +   S       L    +++ N   V
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKN---V 224

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
           G  +  +  A++  Y K G+V+ A+ +F+    ++LV+WN++++   +N +  + +   +
Sbjct: 225 GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M    ++P+ +S++SVL  CS+L  L  G+++H    ++ +  D +   ++L+ MYC C
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTT-ACTSLISMYCKC 343

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            +++   ++F  +  K +  WNAMI+GY Q+    +AL LF KM     + P+  T  +V
Sbjct: 344 GDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRN-GTMKPDWITFVAV 402

Query: 393 VPACVRSEAFPDKEGIHGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           + AC  +  F D    +  ++K   G+         ++D+  R GR++ + ++  +M
Sbjct: 403 ILACNHA-GFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 14/260 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ Q ++A   +  M     + +  ++ A++       DL   ++++ +V
Sbjct: 169 SWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISGYVEHGDLEAAEELYKNV 224

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                G+ SV V   ++  Y K G  +    ++F R+  K+ V+WNSMIA      + + 
Sbjct: 225 -----GMKSVVVETAMLTGYMKFGK-VELAERIFQRMAVKNLVTWNSMIAGYVENCRAED 278

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG-NSLRVGEWNTFIMNA 222
            L+ F+ M+ S V P+  +L SV L CSNLS    L LGRQ+H   S      +T    +
Sbjct: 279 GLKVFKTMIESRVRPNPLSLSSVLLGCSNLS---ALPLGRQMHQLVSKSPLSKDTTACTS 335

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY K G +D A  LF     +D+++WN ++S  +Q+    +A+    +M    +KPD
Sbjct: 336 LISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPD 395

Query: 283 GVSIASVLPACSHLEMLDTG 302
            ++  +V+ AC+H   +D G
Sbjct: 396 WITFVAVILACNHAGFVDLG 415



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY-GMHGEGQEVLELLK 594
           A+DVV  +  +  + +   L  AR VF+ M VR  +TWN ++  Y  + G+ +E  EL  
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD--HYACV 652
            +          +P+ V++  +      S  V   +  F KM       P  D   +  +
Sbjct: 130 KI---------PEPDSVSYNIMLVCYLRSYGVKAALAFFNKM-------PVKDIASWNTL 173

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNVEIGEIAAQNL 705
           +    + G+++ A+ L ++MP   +K G +WS+++     H ++E  E   +N+
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMP---EKNGVSWSAMISGYVEHGDLEAAEELYKNV 224


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/713 (34%), Positives = 396/713 (55%), Gaps = 62/713 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F S ++ +L+ WNT+    
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
           + +   + A+     M   G+ P+  +   +L AC+  +    G++IH + L+     D+
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
            +  S +                           +AL+  Y +   +   +++FD I  K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNA+I+GY +    +EAL LF +M +   + P+ +TM +V+ AC +S +      +
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKT-NVKPDESTMVTVLSACAQSASIELGRQV 257

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H      G G +  + NAL+D+Y + G +E +  +F+ +  +D +SWNT+I GYT    +
Sbjct: 258 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLY 317

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH 
Sbjct: 318 KEALLLFQEMLRSGES-----------------PNEVTMLSILPACAHLGAIDIGRWIHV 360

Query: 529 YAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           Y  + +  ++    + ++L+DMYAKCG +  A++VFD M  R++ +WN +I  + MHG  
Sbjct: 361 YIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRA 420

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++   M  +G     ++P+++TF+ L +ACSHSGM+  G  +F  M +DY I P  
Sbjct: 421 NPAFDIFSRMRKDG-----IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKL 475

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNL 705
           +HY C++DLLG +G  ++A ++IN M  E D  G  W SLL AC++H NVE+GE  AQNL
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINSM--EMDPDGVIWCSLLKACKMHGNVELGESFAQNL 533

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             +EP  +  YVLLSNIY++A  W++    R  + + G++K PGCS IE    +H+F+ G
Sbjct: 534 IKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H ++ +++G LE +   + + G+VPDTS VL  + EE KE  L  HSEKLAIAFG++
Sbjct: 594 DKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 653

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           +T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF +G CSC
Sbjct: 654 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 252/525 (48%), Gaps = 66/525 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+++ FP +LKA A  +    G+QIH HV+
Sbjct: 71  WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--SDMWDVY---------------------------- 134
           K G  L  + V  +L+ MY K G   D   V+                            
Sbjct: 131 KLGCDLD-LYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQ 189

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD I  KD VSWN++I+     G +  ALE F+ M+ +NV+P   T+V+V  AC+   
Sbjct: 190 KMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACA--- 246

Query: 195 RRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +   + LGRQVH   +    G  N  I+NAL+ +Y K G V+ A  LF+    +D++SWN
Sbjct: 247 QSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWN 305

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  ++M   G  P+ V++ S+LPAC+HL  +D G+ IH Y  + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S + ++L+DMY  C ++E  ++VFD + ++ ++ WNAMI G+  +     A  
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL---- 427
           +F +M +  G+ P+  T   ++ AC  S          G  I   +  D  +   L    
Sbjct: 426 IFSRMRK-DGIEPDDITFVGLLSACSHSGMLD-----LGRHIFRSMTEDYKITPKLEHYG 479

Query: 428 --MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
             +D+    G  + ++ + + ME+  D V W +++     C  HG+  +     QN+ + 
Sbjct: 480 CMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKA---CKMHGNVELGESFAQNLIKI 536

Query: 485 KNRN--------NVYDL----DETVLRPKPNSITLMTVLPGCGAL 517
           + +N        N+Y      +E   R    +   M  +PGC ++
Sbjct: 537 EPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 144/265 (54%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  ++EA+  + EM +++++PD      VL A A    + LG+Q+H+ +
Sbjct: 202 SWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWI 261

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG ++     +F+ ++ KD +SWN++I        +  
Sbjct: 262 DDHGFG-SNLKIVNALIDLYIKCG-EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++S+  AC++L   D   +GR +H      L+     + + 
Sbjct: 320 ALLLFQEMLRSGESPNEVTMLSILPACAHLGAID---IGRWIHVYIDKRLKGVSNPSSLR 376

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A+ +F S  +R L SWN ++   + + +   A     +M   GI+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHI 461



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 44/292 (15%)

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD---MYAKCGCLNFARRVFDL 564
           +++L  C  L +L   + IHA  I+  L       S L++   +      L +A  VFD 
Sbjct: 6   LSLLHNCKTLQSL---RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +   N++ WN +   + +  +    L L   M++ G     + PN  TF  L  AC+ S 
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-----LVPNSYTFPFLLKACAKSK 117

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
              EG  +   +    G +     +  ++ +  + G+ EDA ++       FD++     
Sbjct: 118 AFREGQQIHGHVL-KLGCDLDLYVHTSLIAMYVKNGRXEDARKV-------FDQSSHRDV 169

Query: 685 LLGACRIHQNVEIGEI-AAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           +     I      G I +AQ +F   P  DV S   L+S  Y+    + +A+++ K+M +
Sbjct: 170 VSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISG-YAETGNYKEALELFKEMMK 228

Query: 742 MGVRKE--------PGCSW---IEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
             V+ +          C+    IE G ++H ++            HGF  NL
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDD----------HGFGSNL 270


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/558 (41%), Positives = 337/558 (60%), Gaps = 28/558 (5%)

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C      R++FD +S K +  W AMIT Y Q E  EEAL+LF KM++  GL  ++ 
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            + SV  A  +     +   +HG+A +  L  +  V N+++ M+++ G  E ++ +FD M
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD +SWN+M++GYT  GQ  +AL+L  EM++ +                  +P  +T 
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSD-----------------CQPTPVTA 163

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + ++  C  L     G++ H + + + +  D  + +AL+DMYAKCG L  A  +F+ +P 
Sbjct: 164 LIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPP 223

Query: 568 --RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             RN  +WNV+I  YGMHG G+E LEL   M  EG     V+PN  TF ++ +ACSH+G+
Sbjct: 224 TERNAGSWNVLISGYGMHGHGKEALELFSRMQEEG-----VEPNHFTFTSILSACSHAGL 278

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSS 684
           + EG   F +MK    +     H+ACVVD+LGRAG +++A+ LI  MP P  D  G W +
Sbjct: 279 IDEGRKCFAEMKR-LSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSD--GVWGA 335

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL AC+IH N+E+G+ AA NL  LEP+   +YVL+SNIY+++  W +   +R+ MK  G+
Sbjct: 336 LLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGL 395

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
           +K    S IE+G +I  F   D  +    +++  +E+L+  M+  GYVPD SC LH+V E
Sbjct: 396 KKPAAFSMIEYGKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEE 455

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           E+KE +L  HSEKLA+AFG+L   PG  IRV KNLRVCNDCH A K+IS I  R+II+RD
Sbjct: 456 EDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRD 515

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHF+ GTCSC DYW
Sbjct: 516 ANRFHHFQGGTCSCKDYW 533



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 170/330 (51%), Gaps = 10/330 (3%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR-MMLYSNVEPSS 180
           MY KCG    D  K+FD ++ KD V W +MI    +  K + AL  F+ M     +   S
Sbjct: 1   MYAKCGL-FVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADS 59

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTL 239
             +VSVA A   L     ++    VHG + R        + N+++AM+ K G  + A+ +
Sbjct: 60  IAVVSVASAVGQLG---DVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLV 116

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F    +RD++SWN+++S  +QN +  EA++   +M     +P  V+   ++ AC++L   
Sbjct: 117 FDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFR 176

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--SDKKIALWNAMI 357
             G++ H + + + + ID + + +AL+DMY  C ++E    +F+ I  +++    WN +I
Sbjct: 177 HLGRKFHDFIVDSRMEIDTN-LSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLI 235

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           +GYG + + +EAL LF +M+E  G+ PN  T +S++ AC  +    +         +L +
Sbjct: 236 SGYGMHGHGKEALELFSRMQE-EGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSV 294

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
             +      ++DM  R G ++ +  +  +M
Sbjct: 295 TLEDKHHACVVDMLGRAGLLQEAFDLIKEM 324



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 4/151 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ Q  EA+L + EM  SD QP       ++ A A +    LG++ H  +
Sbjct: 127 SWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFI 186

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI--TEKDQVSWNSMIATLCRFGKW 161
           V     + +  ++N L++MY KCG D+     +F+ I  TE++  SWN +I+     G  
Sbjct: 187 VDSRMEIDT-NLSNALMDMYAKCG-DLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHG 244

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             ALE F  M    VEP+ FT  S+  ACS+
Sbjct: 245 KEALELFSRMQEEGVEPNHFTFTSILSACSH 275


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/716 (34%), Positives = 392/716 (54%), Gaps = 60/716 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F + ++  L+ WNT+    
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
           + +   + A+     M   G+ P+  +   +L +C+       G+++H   L+     D+
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
            I  S +                           +AL+  Y +   +E   ++FD I  K
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNA I+GY +    +EAL LF KM +   + P+ +TM +V+ AC +S +      +
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKT-NVRPDESTMVTVLSACAQSGSIELGRQV 257

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H      G G +  + NAL+D+YS+ G +E +  +F  +  +D +SWNT+I GYT    +
Sbjct: 258 HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLY 317

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L ++M    E                 KPN +T++++L  C  L A+  G+ IH 
Sbjct: 318 KEALLLFQDMLRSGE-----------------KPNDVTMLSILSACAHLGAIDIGRWIHV 360

Query: 529 YAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           Y  + +  +     + ++L+DMYAKCG +  A++VFD M  R++ +WN +I  + MHG  
Sbjct: 361 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRA 420

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
               ++   M   G     ++P+++TF+ L +ACSHSGM+  G  +F  M  DY + P  
Sbjct: 421 NAAFDIFSRMRKNG-----IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKL 475

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C++DL G +G  ++A ++IN M  E D    W SLL AC++H NVE+GE  AQNL 
Sbjct: 476 EHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGV-IWCSLLKACKMHGNVELGESYAQNLI 534

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +EP+    YVLLSNIY++A+ W++    R  + + G++K PGCS IE    +H+F+ GD
Sbjct: 535 KIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H ++ +++G LE +   + + G+VPDTS VL  + EE KE  L  HSEKLAIAFG+++
Sbjct: 595 KFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 654

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RFHHF++G CSC DYW
Sbjct: 655 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 236/477 (49%), Gaps = 54/477 (11%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + P+++ FP +LK+ A       G+Q+H  V+
Sbjct: 71  WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130

Query: 105 KYGYGLSSVTVANTLVNMYGKCG-----------SDMWDV-------------------Y 134
           K+G+ L  + +  +L++MY + G           S   DV                   +
Sbjct: 131 KFGFDLD-LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAH 189

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD I  KD VSWN+ I+     G +  ALE F+ M+ +NV P   T+V+V  AC   +
Sbjct: 190 KMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC---A 246

Query: 195 RRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +   + LGRQVH   N    G  N  I+NAL+ +Y+K G ++ A  LF+   ++D++SWN
Sbjct: 247 QSGSIELGRQVHSWINDHGFGX-NLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWN 305

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  + M   G KP+ V++ S+L AC+HL  +D G+ IH Y  + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKR 365

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S + ++L+DMY  C ++E  ++VFD + ++ ++ WNAMI G+  +     A  
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL---- 427
           +F +M +  G+ P+  T   ++ AC  S          G  I   + RD  +   L    
Sbjct: 426 IFSRMRK-NGIEPDDITFVGLLSACSHSGMLD-----LGRHIFRSMTRDYKLMPKLEHYG 479

Query: 428 --MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNM 481
             +D+    G  + ++ + + ME+  D V W +++     C  HG+  +     QN+
Sbjct: 480 CMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA---CKMHGNVELGESYAQNL 533



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 245/544 (45%), Gaps = 70/544 (12%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYG-----YGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           ++L     +Q L +   IHA ++K G     Y LS +     L   +      +     V
Sbjct: 7   SLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHF----DGLPYAISV 59

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD I E   + WN+M            AL+ +  M+   + P+S+T   +  +C   ++ 
Sbjct: 60  FDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSC---AKS 116

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK------------------ 237
              + G+Q+HG  L+ G + + +I  +L++MY + GR++DA+                  
Sbjct: 117 XAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALI 176

Query: 238 -------------TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
                         +F     +D+VSWN  +S  ++   + EA+   ++M    ++PD  
Sbjct: 177 TGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDES 236

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           ++ +VL AC+    ++ G+++H++ + +     N  + +AL+D+Y  C E+E    +F  
Sbjct: 237 TMVTVLSACAQSGSIELGRQVHSW-INDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +S+K +  WN +I GY      +EAL+LF  M   +G  PN  TM S++ AC    A   
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLR-SGEKPNDVTMLSILSACAHLGAIDI 354

Query: 405 KEGIHGHAIKL--GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              IH +  K   G+     ++ +L+DMY++ G IE ++ +FD M  R   SWN MI G+
Sbjct: 355 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            + G+   A  +   M+       +N +          +P+ IT + +L  C     L  
Sbjct: 415 AMHGRANAAFDIFSRMR-------KNGI----------EPDDITFVGLLSACSHSGMLDL 457

Query: 523 GKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G+ I     R+  L   +     ++D+    G    A ++ + M +  + + W  ++ A 
Sbjct: 458 GRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKAC 517

Query: 581 GMHG 584
            MHG
Sbjct: 518 KMHG 521



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 143/265 (53%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  ++EA+  + +M +++++PD      VL A A    + LG+Q+H+ +
Sbjct: 202 SWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI 261

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G  ++ + N L+++Y KCG ++     +F  ++ KD +SWN++I        +  
Sbjct: 262 NDHGFG-XNLKIVNALIDLYSKCG-ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKE 319

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S  +P+  T++S+  AC++L   D   +GR +H      L+     + + 
Sbjct: 320 ALLLFQDMLRSGEKPNDVTMLSILSACAHLGAID---IGRWIHVYIDKRLKGVTNASSLR 376

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ A+ +F S  +R L SWN ++   + + +   A     +M   GI+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHI 461


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/679 (36%), Positives = 379/679 (55%), Gaps = 56/679 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F++ ++ +L+ WNT+    + N   + A+     M   G+ P+  S   +L +C+ 
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 296 LEMLDTGKEIHAYALRN----DILIDNSFVG--------------------------SAL 325
            + L  G++IH + L+     D+ ++ S +                           +AL
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +  Y +   +   R++FD IS K +  WNAMI+GY +    +EAL L+  M +   + P+
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK-TNVKPD 196

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            +TM +VV AC +S +      +H      G G +  + N L+D+YS+ G +E +  +F 
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D +SWNT+I G+T    + +AL+L +EM    E                  PN +
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES-----------------PNDV 299

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFD 563
           T+++VLP C  L A+  G+ IH Y  + +  +     + ++L+DMYAKCG +  A++VFD
Sbjct: 300 TMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFD 359

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            M  R++ +WN +I  + MHG+     +L   M   G     + P+++TF+ L +ACSHS
Sbjct: 360 SMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNG-----IDPDDITFVGLLSACSHS 414

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           GM+  G  +F  M  DY I P  +HY C++DLLG  G  ++A ++I  MP E D    W 
Sbjct: 415 GMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGV-IWC 473

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           SLL AC++H NVE+GE  AQNL  +EP+    YVLLSNIY++A  WD+   +R  + + G
Sbjct: 474 SLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKG 533

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           ++K PGCS IE    +H+F+ GD  H ++ +++  LE +   M + G+VPDTS VL  + 
Sbjct: 534 IKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEME 593

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           EE KE  L  HSEKLAIAFG+++T PGT + + KNLRVC +CH+ATK ISKI  REII R
Sbjct: 594 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 653

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  R H  K+G  SC DYW
Sbjct: 654 DRTRLHLLKDGVWSCHDYW 672



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 205/388 (52%), Gaps = 39/388 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A ++    A+  Y+ M    + P++++FP +LK+ A  + L  G+QIH HV+
Sbjct: 33  WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
           K GY L  + V  +L++MY + G  + D +KVFDR                         
Sbjct: 93  KLGYDL-DMYVNTSLISMYAQNGR-LEDAHKVFDRSSHRHVVSYTALITGYASRGYINNA 150

Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                 I+ KD VSWN+MI+       +  ALE ++ M+ +NV+P   T+V+V  AC   
Sbjct: 151 RKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSAC--- 207

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           ++   + LGRQ+H      G   N  I+N L+ +Y+K G V+ A  LF+    +D++SWN
Sbjct: 208 AQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWN 267

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           T++   +  + + EA++  ++M   G  P+ V++ SVLPAC+HL  +D G+ IH Y  + 
Sbjct: 268 TLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKR 327

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              + N S + ++L+DMY  C ++E  ++VFD +  + ++ WNAMI G+  +     A  
Sbjct: 328 LKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFD 387

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRS 399
           LF KM +  G+ P+  T   ++ AC  S
Sbjct: 388 LFSKMRK-NGIDPDDITFVGLLSACSHS 414



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 141/265 (53%), Gaps = 8/265 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  F+EA+  Y +M +++++PD      V+ A A    + LG+Q+H+ +
Sbjct: 164 SWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWI 223

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+G S++ + N L+++Y KCG ++     +F  + +KD +SWN++I        +  
Sbjct: 224 EDHGFG-SNIKIVNVLIDLYSKCG-EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKE 281

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
           AL  F+ ML S   P+  T++SV  AC++L   D   +GR +H      L+     + ++
Sbjct: 282 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID---IGRWIHVYINKRLKGVTNASSLL 338

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ MYAK G ++ AK +F S   R L SWN ++   + + K   A     +M   GI 
Sbjct: 339 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 398

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           PD ++   +L ACSH  MLD G+ I
Sbjct: 399 PDDITFVGLLSACSHSGMLDLGRHI 423



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 30/228 (13%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L++A  +F+ +   N++ WN +   + ++ +    L+L   M++ G     + PN  +F 
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG-----LLPNSYSFP 69

Query: 615 ALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            L  +C+ S  + EG  +  + +K  Y ++   +    ++ +  + G++EDA+++     
Sbjct: 70  FLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVN--TSLISMYAQNGRLEDAHKV----- 122

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLF--LLEPDVASHYVLLSNIYSSAQLWD 730
             FD++     +     I      G I  A+ LF  +   DV S   ++S  Y     + 
Sbjct: 123 --FDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISG-YVETCNFK 179

Query: 731 KAMDVRKKMKEMGVRKE--------PGCSW---IEFGDEIHKFLAGDG 767
           +A+++ K M +  V+ +          C+    IE G ++H ++   G
Sbjct: 180 EALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG 227


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/701 (37%), Positives = 408/701 (58%), Gaps = 31/701 (4%)

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGR 232
           +V P S+ ++  +    +L+ + GL+ GR+VHG+ +  G  ++   I N L+ MYAK G 
Sbjct: 25  DVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 84

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           + DA+ +F    ++D VSWN++++ L QN  F+EAV   + M    I P   ++ S L +
Sbjct: 85  IADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSS 144

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C+ L+    G++IH  +L+  I ++ S V +AL+ +Y     +   R++F  + +     
Sbjct: 145 CASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETGYLNECRKIFSSMPEHDQVS 203

Query: 353 WNAMITGYGQNEYD-EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           WN++I     +E    EA+  F+     AG   N  T SSV+ A          + IHG 
Sbjct: 204 WNSIIGALASSERSLPEAVACFLNALR-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGL 262

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGD 470
           A+K  +  +   +NAL+  Y + G ++  + IF  M E RD V+WN+MI+GY     H +
Sbjct: 263 ALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI----HNE 318

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
            L            K  + V+ + +T  R   +S    TVL    +++ L +G E+HA +
Sbjct: 319 LL-----------AKALDLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHACS 365

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           +R  L +DVVVGSALVDMY+KCG L++A R F+ MPVRN  +WN +I  Y  HG+G+E L
Sbjct: 366 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 425

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           +L  NM  +G    +  P+ VTF+ + +ACSH+G++ EG   F  M D YG+ P  +H++
Sbjct: 426 KLFANMKLDG----QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS 481

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLL 708
           C+ DLLGRAG+++     I+ MP +      W ++LGAC R + +  E+G+ AA+ LF L
Sbjct: 482 CMADLLGRAGELDKLEDFIDKMPVK-PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 540

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP+ A +YVLL N+Y++   W+  +  RKKMK+  V+KE G SW+   D +H F+AGD S
Sbjct: 541 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 600

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H  ++ ++  L+ L+ +MR  GYVP T   L+++ +E KE +L  HSEKLA+AF +    
Sbjct: 601 HPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQR 660

Query: 829 PGT-TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             T  IR+ KNLRVC DCH A K+ISKIE R+IILRD  R+
Sbjct: 661 SSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 182/582 (31%), Positives = 300/582 (51%), Gaps = 48/582 (8%)

Query: 72  DIQPDNF-----AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           D+ P+++     +FP    ++A    L  G+++H HV+  G     V + N LVNMY KC
Sbjct: 25  DVSPESYVILLSSFPEY--SLAEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 82

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           GS + D  +VF  + EKD VSWNSMI  L + G +  A+E ++ M    + P SFTL+S 
Sbjct: 83  GS-IADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISS 141

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             +C++L      +LG+Q+HG SL++G + N  + NALM +YA+ G +++ + +F S  +
Sbjct: 142 LSSCASLK---WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 198

Query: 246 RDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            D VSWN+I+ +L+ +++ L EAV         G K + ++ +SVL A S L   + GK+
Sbjct: 199 HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ 258

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WNAMITGYGQN 363
           IH  AL+ +I  D +   +AL+  Y  C E++   ++F  +S+++  + WN+MI+GY  N
Sbjct: 259 IHGLALKYNI-ADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHN 317

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           E   +AL L   M +  G   ++   ++V+ A            +H  +++  L  D  V
Sbjct: 318 ELLAKALDLVWFMLQT-GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 376

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL+DMYS+ GR++ +   F+ M VR++ SWN+MI+GY   GQ  +AL L   M+    
Sbjct: 377 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMK---- 432

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVG 542
                    LD    +  P+ +T + VL  C     L +G K   + +    LA  +   
Sbjct: 433 ---------LDG---QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 480

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII----MAYGMHGE-GQEVLELLKNM 596
           S + D+  + G L+      D MPV+ NV+ W  ++     A G   E G++  E+L  +
Sbjct: 481 SCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 540

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
             E         N V ++ L    +  G   + +    KMKD
Sbjct: 541 EPE---------NAVNYVLLGNMYAAGGRWEDLVKARKKMKD 573



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 214/423 (50%), Gaps = 15/423 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  F EA+  Y  M R +I P +F   + L + A ++   LG+QIH   
Sbjct: 102 SWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGES 161

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK-WD 162
           +K G  L +V+V+N L+ +Y + G  + +  K+F  + E DQVSWNS+I  L    +   
Sbjct: 162 LKLGIDL-NVSVSNALMTLYAETGY-LNECRKIFSSMPEHDQVSWNSIIGALASSERSLP 219

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-N 221
            A+  F   L +  + +  T  SV  A S+LS  +   LG+Q+HG +L+    +     N
Sbjct: 220 EAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGE---LGKQIHGLALKYNIADEATTEN 276

Query: 222 ALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           AL+A Y K G +D  + +F    E RD V+WN+++S    N+   +A+  +  M   G +
Sbjct: 277 ALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQR 336

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            D    A+VL A + +  L+ G E+HA ++R   L  +  VGSALVDMY  C  ++   R
Sbjct: 337 LDSFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALR 395

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            F+ +  +    WN+MI+GY ++   EEAL LF  M+      P+  T   V+ AC  S 
Sbjct: 396 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSAC--SH 453

Query: 401 AFPDKEGI-HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTV-SWN 456
           A   +EG  H  ++    G    +++   + D+  R G ++  +   D M V+  V  W 
Sbjct: 454 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWR 513

Query: 457 TMI 459
           T++
Sbjct: 514 TVL 516


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/635 (38%), Positives = 380/635 (59%), Gaps = 31/635 (4%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++ SL +     +A+  L         P   +   ++ +C+H   L   + +H + L 
Sbjct: 43  NKLIQSLCKQGNLTQALELLSLEP----NPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N    D  F+ + L++MY     ++  R+VFD   ++ I ++NA+        + EE L 
Sbjct: 99  NGFDQD-PFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLN 157

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD----KEGIHGHAIKLGLGRDRYVQNAL 427
           ++ +M  + G+  +  T + V+ ACV SE F         IH H ++ G     ++   L
Sbjct: 158 MYRRMNSI-GIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTL 216

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +DMY++ G +  +  +F+ M V++ VSW+ MI  Y   G+  +AL L RE+  M E ++ 
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFREL--MLETQDL 274

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                         PNS+T+++VL  C AL+AL +G+ IH Y +R  L + + V SALV 
Sbjct: 275 C-------------PNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVT 321

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MYA+CG L   +RVFD M  R+V++WN +I +YG+HG G++ + + + M   G     V+
Sbjct: 322 MYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNG-----VE 376

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+ ++F+++  ACSH+G+V EG  LF  M   +GI PS +HYAC+VDLLGRA ++E+A +
Sbjct: 377 PSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAK 436

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           +I  M  E      W SLLG+CRIH NVE+ E A+  LF LEP  A +YVLL++IY+ A 
Sbjct: 437 IIENMRIE-PGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAG 495

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +WD    V+K ++  G++K PG SWIE   +I+ F++ D  + + EQLH  L  LS  ++
Sbjct: 496 MWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELK 555

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           +EGYVP T  VL+++   EKE ++ GHSEKLA+AFG++N+  G  IR+ K+LR+C DCH 
Sbjct: 556 EEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHS 615

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            TKFISK  ++EI++RDV RFHHF++G CSCGDYW
Sbjct: 616 FTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 210/428 (49%), Gaps = 36/428 (8%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N +I +LC+ G    ALE    +L     P+  T   + L+C++   ++ L   ++VH +
Sbjct: 43  NKLIQSLCKQGNLTQALE----LLSLEPNPAQHTYELLILSCTH---QNSLLDAQRVHRH 95

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            L  G + + F+   L+ MY+    +D+A+ +F    +R +  +N +  +LS      E 
Sbjct: 96  LLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEV 155

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLE----MLDTGKEIHAYALRNDILIDNSFVG- 322
           +   R+M   GI  D  +   VL AC   E    +L+ G+EIHA+ LR+     + +V  
Sbjct: 156 LNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGY---DGYVHI 212

Query: 323 -SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK-MEEVA 380
            + LVDMY     V     VF+ +  K +  W+AMI  Y +N    EAL LF + M E  
Sbjct: 213 MTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQ 272

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            L PN+ TM SV+ AC    A      IHG+ ++ GL     V +AL+ MY+R G++E+ 
Sbjct: 273 DLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELG 332

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD M+ RD VSWN++I+ Y + G    A+ +  EM         N V          
Sbjct: 333 QRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM-------TYNGV---------- 375

Query: 501 KPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           +P+ I+ ++VL  C     + +GK + ++  + + +   V   + +VD+  +   L  A 
Sbjct: 376 EPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAA 435

Query: 560 RVFDLMPV 567
           ++ + M +
Sbjct: 436 KIIENMRI 443



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 148/262 (56%), Gaps = 12/262 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG----IQDLSLGKQIHAHVV 104
            R+ + +    E +  Y  M    I  D F +  VLKA       +  L+ G++IHAH++
Sbjct: 143 FRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHIL 202

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           ++GY    V +  TLV+MY K G  + +   VF+++  K+ VSW++MIA   + GK   A
Sbjct: 203 RHGYD-GYVHIMTTLVDMYAKFGC-VSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEA 260

Query: 165 LEAFR--MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMN 221
           LE FR  M+   ++ P+S T+VSV  AC+ L+  +    GR +HG  LR G  +   +++
Sbjct: 261 LELFRELMLETQDLCPNSVTMVSVLQACAALAALEQ---GRLIHGYILRKGLDSILPVIS 317

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYA+ G+++  + +F   + RD+VSWN+++SS   +    +A+    +M   G++P
Sbjct: 318 ALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEP 377

Query: 282 DGVSIASVLPACSHLEMLDTGK 303
             +S  SVL ACSH  ++D GK
Sbjct: 378 SPISFVSVLGACSHAGLVDEGK 399


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/771 (34%), Positives = 414/771 (53%), Gaps = 37/771 (4%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +V+ Y K   +++   ++F+ +  +++VSW  MI    +  +   A   +  M  S V
Sbjct: 81  NMMVSGYVK-SRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
           +P   T  ++    S       L+   Q+H + +R G   +  + N+L+  Y K   +D 
Sbjct: 140 KPDHITFATL---LSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDI 196

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  LF     +D VS+N +++  ++     EA+    QM     +P G + A++L     
Sbjct: 197 ASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
            E +  G++IH  A++   + D  FV +AL+D Y     ++  + +FD + +     +N 
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWD-IFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNI 315

Query: 356 MITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           +ITGY  N   E++  LF +++  +     +P AT +S        S         H  A
Sbjct: 316 IITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMG----RQTHAQA 371

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           +      +  V NAL+DMY++  + E +  IF ++  R++V W  +I+ Y   G H +AL
Sbjct: 372 VVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEAL 431

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            + +EM       NR NV+           +  T  + L     L++++ GK++H+  IR
Sbjct: 432 KMFKEM-------NRENVHG----------DQATFASTLKASANLASVSLGKQLHSSVIR 474

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             L + V  GS LVDMYA CG +  A  VF  MP RN++ WN +I AY  +G+ +     
Sbjct: 475 LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSS 534

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
             +M+  G     + P+ V+F+++  ACSH G+V + +  F  M   Y ++P   HYA +
Sbjct: 535 FADMIESG-----LYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATM 589

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP-D 711
           +D+L R+G+  +A  LI+ MP E D+   WSS+L +CRIH+N ++ + AA  LF ++   
Sbjct: 590 IDVLCRSGRFNEAENLISEMPFEPDEV-MWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648

Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
            A+ YV +SNIY+ A  W+ A  V+K M+E GV+K    SW+E    +H F A D +H Q
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708

Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT 831
           +EQ+   + +L E M KEGY PDTSC L NV+EE K   L  HSE+LAIAF ++NTP G+
Sbjct: 709 TEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGS 768

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            I + KNLR C DCH A K ISKI  REI +RD  RFHHF++G+CSCGDYW
Sbjct: 769 PIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 272/558 (48%), Gaps = 47/558 (8%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           +R + SW   +   +++NQ +EA   Y EM RS ++PD+  F  +L        L    Q
Sbjct: 105 SRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQ 164

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGK-CGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           IH+H++++G+  +S+ V N+LV+ Y K C  D+    ++F  +  KD VS+N MI    +
Sbjct: 165 IHSHIIRFGFS-ASLIVFNSLVDSYCKTCCLDI--ASQLFSEMPTKDSVSFNVMITGYTK 221

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WN 216
           +G  + AL+ F  M   + +PS FT    A+   ++   D +  G+Q+HG +++    W+
Sbjct: 222 YGFREEALKLFMQMRNMDFQPSGFTF--AAMLGMSVGSEDVI-FGQQIHGLAIKTSYVWD 278

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ NAL+  Y+K   +D AK LF    + D VS+N I++  + N ++ ++    +++  
Sbjct: 279 IFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG 338

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
                     A++L   +    L  G++ HA A+     +    VG+ALVDMY  C + E
Sbjct: 339 TSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVT-TAVSEVQVGNALVDMYAKCEKFE 397

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVP 394
              R+F  ++ +    W A+I+ Y Q  + EEAL +F +M  E V G   +  T +S + 
Sbjct: 398 DANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG---DQATFASTLK 454

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A     +    + +H   I+LGL    +  + L+DMY+  G ++ +  +F +M  R+ V 
Sbjct: 455 ASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVC 514

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN +I+ Y+   Q+GDA            E   ++  D+ E+ L   P+S++ ++VL  C
Sbjct: 515 WNALISAYS---QNGDA------------EATFSSFADMIESGLY--PDSVSFLSVLTAC 557

Query: 515 GALSALAKG-----KEIHAYAI---RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
                + K           Y +   R   AT       ++D+  + G  N A  +   MP
Sbjct: 558 SHRGLVEKALWYFNSMTQVYKLDPRRKHYAT-------MIDVLCRSGRFNEAENLISEMP 610

Query: 567 VR-NVITWNVIIMAYGMH 583
              + + W+ ++ +  +H
Sbjct: 611 FEPDEVMWSSVLNSCRIH 628



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 230/473 (48%), Gaps = 27/473 (5%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           NT  +N +++ Y K   +  A+ LF+S   R+ VSW  ++   SQN++  EA     +M 
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+KPD ++ A++L        L    +IH++ +R      +  V ++LVD YC    +
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG-FSASLIVFNSLVDSYCKTCCL 194

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +   ++F  +  K    +N MITGY +  + EEAL LF++M  +    P+  T ++++  
Sbjct: 195 DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNM-DFQPSGFTFAAMLGM 253

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
            V SE     + IHG AIK     D +V NAL+D YS+   I+++K +FD+M   D VS+
Sbjct: 254 SVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSY 313

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N +ITGY   GQ+  +  L + +Q    ++                  +    T+L    
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDR-----------------KNFPFATMLSVAA 356

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
               L+ G++ HA A+     ++V VG+ALVDMYAKC     A R+F  +  RN + W  
Sbjct: 357 IELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II  Y   G  +E L++ K M  E   G     ++ TF +   A ++   VS G  L + 
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVHG-----DQATFASTLKASANLASVSLGKQL-HS 470

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
                G+  S    + +VD+    G ++DA ++   MP        W++L+ A
Sbjct: 471 SVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDR--NIVCWNALISA 521



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 19/198 (9%)

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK------- 485
           R  +I  ++ +FD+M  R+T S N M++GY        A  L   M +  E         
Sbjct: 58  RANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGG 117

Query: 486 -NRNN----VYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
            ++NN     ++L   + R   KP+ IT  T+L G    + L +  +IH++ IR   +  
Sbjct: 118 YSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSAS 177

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           ++V ++LVD Y K  CL+ A ++F  MP ++ +++NV+I  Y  +G  +E L+L   M  
Sbjct: 178 LIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQM-- 235

Query: 599 EGSRGGEVKPNEVTFIAL 616
              R  + +P+  TF A+
Sbjct: 236 ---RNMDFQPSGFTFAAM 250


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/657 (36%), Positives = 370/657 (56%), Gaps = 26/657 (3%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY+KL   + A+ L +    R +V+W  ++S   QN  F  A+++  +M    IKP+  +
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
                 A + L +   GK+IHA AL+    I++ FVG +  DMY         +R+FD +
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLG-QINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             + +A+WNA I+    +    +A+  FI+   V G  P+  T  + + AC  +      
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGG-EPDLITFCAFLNACADARCLDLG 178

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +HG  I+ G   D  V N ++D+Y +   +E+++ +F+ M  R++VSW TM+     C
Sbjct: 179 RQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAA---C 235

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            Q+              +EK +  V  L       +     + +V+     +S L  G+ 
Sbjct: 236 EQN--------------DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRS 281

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +HA A++  +  D+ VGSALVDMY KCG +    +VF  MP RN+++WN +I  Y   G+
Sbjct: 282 VHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGD 341

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
               + L + M +E         N VT I + +ACS  G V  G ++F  M+D Y IEP 
Sbjct: 342 VDMAMTLFEEMQSEAV------ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPG 395

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            +HYAC+ D+LGRAG VE AY+ +  MP        W +LL ACR++   E+G+IAA NL
Sbjct: 396 AEHYACIADMLGRAGMVERAYEFVQKMPIR-PTISVWGALLNACRVYGEPELGKIAADNL 454

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F L+P  + ++VLLSN++++A  WD+A  VRK+MK++G++K  GCSW+   +++H F A 
Sbjct: 455 FKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAK 514

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH+++ ++   L  L   M+  GY+PDT+  L+++ EEEK T +  HSEK+A+AFG++
Sbjct: 515 DTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLI 574

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             PPG  IR+ KNLR+C DCH A KFIS I  REII+RD  RFH F++  CSC D+W
Sbjct: 575 ALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 218/452 (48%), Gaps = 33/452 (7%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
             L L  + TRC  +W   +    ++  F  A+L + +M R +I+P++F FP   KA   
Sbjct: 11  AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTA 70

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           +     GKQIHA  +K G  ++   V  +  +MY K G   ++  ++FD +  ++   WN
Sbjct: 71  LCLPFAGKQIHAIALKLGQ-INDKFVGCSAFDMYSKTGLK-FEAQRLFDEMPPRNVAVWN 128

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           + I+     G+   A++ F        EP   T  +   AC++    D   LGRQ+HG  
Sbjct: 129 AYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLD---LGRQLHGLV 185

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +R G E +  + N ++ +Y K   V+ A+ +F     R+ VSW T+V++  QND+  +A 
Sbjct: 186 IRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKAC 245

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           +        GI+     ++SV+ A + +  L+ G+ +HA A++  +  D  FVGSALVDM
Sbjct: 246 VVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGD-IFVGSALVDM 304

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  +E   +VF  + ++ +  WNAMI+GY      + A+ LF +M+  A    N  T
Sbjct: 305 YGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEA--VANYVT 362

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLG-----LGRDRYV-------QNALMDMYSRMGR 436
           +  V+ AC R           G A+KLG       RDRY           + DM  R G 
Sbjct: 363 LICVLSACSR-----------GGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGM 411

Query: 437 IEISKTIFDDMEVRDTVS-WNTMITGYTICGQ 467
           +E +      M +R T+S W  ++    + G+
Sbjct: 412 VERAYEFVQKMPIRPTISVWGALLNACRVYGE 443


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/724 (34%), Positives = 387/724 (53%), Gaps = 75/724 (10%)

Query: 223 LMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           L+  Y+ LG +  A+ +F     + RD V +N +++  S  +    A+   R M     +
Sbjct: 85  LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ 144

Query: 281 PDGVSIASVLPACS------------HLEMLDTGKEIH---------------------- 306
           PD  + ASVL A +            H  ++  G EI                       
Sbjct: 145 PDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSS 204

Query: 307 ------AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
                 A  L +++   N F+ + L+  Y    ++   R + D ++++    WNAMI+GY
Sbjct: 205 SSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGY 264

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
             +   E+AL LF KM  + G+  + +T +SV+ AC     F   + +H + +K  L  D
Sbjct: 265 LHHGLFEDALTLFRKMR-LLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPD 323

Query: 421 R----YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           R     V N L+ +Y + G+++ ++ IF +M V+D ++WNT+++GY   G+  +A     
Sbjct: 324 RDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFA 383

Query: 477 EM--QNM----------------EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +M  +N+                E+     N   LD      +PN       +  C  L 
Sbjct: 384 QMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY----EPNDYAFAGAITACSVLG 439

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  G+++HA  +     + + VG+A++ MYA+CG +  AR +F  MP  + ++WN +I 
Sbjct: 440 ALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIA 499

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A G HG G + +EL + M+ EG     + P+  TF+ + +ACSH+G+V EG   F  M +
Sbjct: 500 ALGQHGHGVKAIELYEQMLKEG-----ILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           +YGI P  DHYA ++DL  RAGK  DA  +I+ MP E  +A  W +LL  CR H N+++G
Sbjct: 555 NYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFE-ARAPIWEALLAGCRTHGNMDLG 613

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
             AA+ LF L P     YVLLSN+Y+S   W+     RK M++ GV+KEP CSW E  ++
Sbjct: 614 IEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENK 673

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           +H FL  D  H +   ++ +LE L+  M+K GY+PDT  VLH++  E KE  L  HSEKL
Sbjct: 674 VHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKL 733

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A+AFG++  P G T+RV KNLR+C DCH A KF+SK+  REI++RD +RFHHFKNG CSC
Sbjct: 734 AVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSC 793

Query: 879 GDYW 882
            +YW
Sbjct: 794 RNYW 797



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 254/623 (40%), Gaps = 135/623 (21%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE------- 142
           +   SL + +H HV+  G+ L    + N L+++Y K  SD     K+FD I +       
Sbjct: 26  LSSYSLARTVHGHVIASGFKLRG-HIVNRLIDIYWK-SSDFVYARKLFDEIPQPDVIART 83

Query: 143 --------------------------KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
                                     +D V +N+MI           A+E FR M ++N 
Sbjct: 84  TLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANF 143

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG----------------------- 213
           +P  FT  SV L+ S L   D  + G Q+HG  ++ G                       
Sbjct: 144 QPDDFTFASV-LSASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPL 201

Query: 214 ------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
                             + N FI   L+  Y + G +  A+ +  +  ++  ++WN ++
Sbjct: 202 VSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMI 261

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S    +  F +A+   R+M L G++ D  +  SV+ AC+       GK++HAY L+N++ 
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELN 321

Query: 316 IDNSF---VGSALVDMYCNCREVECGRRVF------DFIS-------------------- 346
            D  F   VG+ L+ +Y    +V+  R++F      D I+                    
Sbjct: 322 PDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSF 381

Query: 347 -----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
                +K +  W  MI+G  QN + E+AL LF +M ++ G  PN    +  + AC    A
Sbjct: 382 FAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQM-KLDGYEPNDYAFAGAITACSVLGA 440

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             +   +H   + LG      V NA++ MY+R G +E ++T+F  M   D VSWN+MI  
Sbjct: 441 LENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAA 500

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               GQHG  +  +   + M           L E +L   P+  T +TVL  C     + 
Sbjct: 501 ---LGQHGHGVKAIELYEQM-----------LKEGIL---PDRRTFLTVLSACSHAGLVE 543

Query: 522 KGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G       + N  +A      + ++D++ + G  + A+ V D MP       W  ++  
Sbjct: 544 EGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAG 603

Query: 580 YGMHGE---GQEVLELLKNMVAE 599
              HG    G E  E L  ++ +
Sbjct: 604 CRTHGNMDLGIEAAEKLFKLIPQ 626



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 216/500 (43%), Gaps = 101/500 (20%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAHVVKYGYGLSSVT 114
           N    AI  +  M  ++ QPD+F F +VL A   I  D     Q+H  VVK+G  +    
Sbjct: 126 NDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFP-A 184

Query: 115 VANTLVNMYGKCG---------------------------------------SDMWDVYK 135
           V N L+++Y KC                                         D+    +
Sbjct: 185 VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGARE 244

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           + D +TE+  ++WN+MI+     G ++ AL  FR M    V+    T  SV  AC+    
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACA---- 300

Query: 196 RDG--LRLGRQVH------------------GNSLRVGEW------------------NT 217
            DG    LG+QVH                  GN+L    W                  + 
Sbjct: 301 -DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDI 359

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
              N L++ Y   GR+++AK+ F    +++L++W  ++S L+QN    +A+    QM L 
Sbjct: 360 ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLD 419

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYA--LRNDILIDNSFVGSALVDMYCNCREV 335
           G +P+  + A  + ACS L  L+ G+++HA    L +D  +    VG+A++ MY  C  V
Sbjct: 420 GYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLS---VGNAMITMYARCGIV 476

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R +F  +       WN+MI   GQ+ +  +A+ L+ +M +  G+ P+  T  +V+ A
Sbjct: 477 EAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLK-EGILPDRRTFLTVLSA 535

Query: 396 CVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVR 450
           C  +    +        ++   +  G D Y +  ++D++ R G+   +K + D M  E R
Sbjct: 536 CSHAGLVEEGNRYFNSMLENYGIAPGEDHYAR--MIDLFCRAGKFSDAKNVIDSMPFEAR 593

Query: 451 DTVSWNTMITGYTICGQHGD 470
             + W  ++ G   C  HG+
Sbjct: 594 API-WEALLAG---CRTHGN 609



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 159/351 (45%), Gaps = 38/351 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +        F +A+  + +M    +Q D   + +V+ A A      LGKQ+HA++
Sbjct: 256 AWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYI 315

Query: 104 VKYGYGLSS---VTVANTLVNMYGKCGS------------------------------DM 130
           +K          ++V NTL+ +Y K G                                M
Sbjct: 316 LKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRM 375

Query: 131 WDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC 190
            +    F ++ EK+ ++W  MI+ L + G  + AL+ F  M     EP+ +       AC
Sbjct: 376 EEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITAC 435

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           S L     L  GRQ+H   + +G  +T  + NA++ MYA+ G V+ A+T+F +    D V
Sbjct: 436 SVLG---ALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPV 492

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWN+++++L Q+   ++A+    QM   GI PD  +  +VL ACSH  +++ G       
Sbjct: 493 SWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSM 552

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG 359
           L N  +       + ++D++C   +    + V D +  + +  +W A++ G
Sbjct: 553 LENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAG 603



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 175/396 (44%), Gaps = 45/396 (11%)

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITGYGQ 362
           ++A  L ++I   +    + L+  Y     ++  R +F+   +  +    +NAMITGY  
Sbjct: 65  VYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSH 124

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG---IHGHAIKLGLGR 419
                 A+ LF  M   A   P+  T +SV+ A   +  F D+     +HG  +K G+  
Sbjct: 125 MNDGHSAIELFRAMRW-ANFQPDDFTFASVLSAS--TLIFYDERQCGQMHGTVVKFGIEI 181

Query: 420 DRYVQNALMDMYSRMGR---------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
              V NAL+ +Y +            +  ++ +FD+M  R+   W T+ITGY   G    
Sbjct: 182 FPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTG 241

Query: 471 ALMLLREMQN--------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGA 516
           A  +L  M          M      + +++   T+ R       + +  T  +V+  C  
Sbjct: 242 AREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACAD 301

Query: 517 LSALAKGKEIHAYAIRNMLATD----VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                 GK++HAY ++N L  D    + VG+ L+ +Y K G ++ AR++F  MPV+++IT
Sbjct: 302 GGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIIT 361

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN ++  Y   G  +E       M          + N +T+  + +  + +G   + + L
Sbjct: 362 WNTLLSGYVNAGRMEEAKSFFAQM---------PEKNLLTWTVMISGLAQNGFGEQALKL 412

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           F +MK D G EP+   +A  +      G +E+  QL
Sbjct: 413 FNQMKLD-GYEPNDYAFAGAITACSVLGALENGRQL 447


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/595 (38%), Positives = 350/595 (58%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S+L +C   + L+ GK++HA      I   N  + + LV +Y     +   R +FD I  
Sbjct: 52  SLLQSCIDSKALNPGKQLHAQFYHLGIAY-NQDLATKLVHLYAVSNSLLNARNLFDKIPK 110

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + + LWN +I GY  N   + A++L+ KM +  GL P+  T+  V+ AC    A  +   
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDY-GLRPDNFTLPFVLKACSALSAIGEGRS 169

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH + IK G  RD +V  AL+DMY++ G +  +  +FD + VRD V WN+M+  Y   G 
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +++ L REM         N V          +P   TL+TV+     ++ L  G+EIH
Sbjct: 230 PDESISLCREMA-------ANGV----------RPTEATLVTVISSSADVACLPYGREIH 272

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            +  R+   ++  V +AL+DMYAKCG +  A  +F+ +  + V++WN II  Y MHG   
Sbjct: 273 GFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             L+L   M  E       +P+ +TF+ + AACS   ++ EG  L+  M  DYGI P+  
Sbjct: 333 GALDLFDKMRKED------RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQ 386

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY C++DLLG  G++++AY LI  M  + D +G W +LL +C+IH NVE+ E+A + L  
Sbjct: 387 HYTCMIDLLGHCGQLDEAYDLIRNMSVKPD-SGVWGALLNSCKIHGNVELAELALEKLIE 445

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEPD + +YV+L+N+Y+ +  W+    +R+ M +  ++K   CSWIE  ++++ FLAGD 
Sbjct: 446 LEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDV 505

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH  S+ ++  L+ L   M + GY PDT  V H+V E+EK +++C HSE+LAIAFG+++T
Sbjct: 506 SHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLIST 565

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PGT + + KNLR+C DCH A KFISKI  REI +RDV R+H FK+G CSCGD+W
Sbjct: 566 SPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 211/421 (50%), Gaps = 12/421 (2%)

Query: 74  QPD-NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           QP  ++ + ++L++    + L+ GKQ+HA     G   +   +A  LV++Y    S + +
Sbjct: 43  QPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQ-DLATKLVHLYAVSNS-LLN 100

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FD+I +++   WN +I      G  D A+  +  ML   + P +FTL  V  ACS 
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           LS    +  GR +H   ++ G E + F+  AL+ MYAK G V DA  +F     RD V W
Sbjct: 161 LS---AIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLW 217

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++++ +QN    E++   R+MA  G++P   ++ +V+ + + +  L  G+EIH +  R
Sbjct: 218 NSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR 277

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +     N  V +AL+DMY  C  V+    +F+ + +K++  WNA+ITGY  +     AL 
Sbjct: 278 HGFQ-SNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALD 336

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDM 430
           LF KM +     P+  T   V+ AC R     +   ++   ++  G+         ++D+
Sbjct: 337 LFDKMRKEDR--PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDL 394

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
               G+++ +  +  +M V+ D+  W  ++    I G    A + L ++  +E + + N 
Sbjct: 395 LGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNY 454

Query: 490 V 490
           V
Sbjct: 455 V 455



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 177/341 (51%), Gaps = 17/341 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +     AI+ Y +M    ++PDNF  P VLKA + +  +  G+ IH +V+
Sbjct: 116 WNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVI 175

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+    + V   L++MY KCG  M D  +VFD+I  +D V WNSM+A   + G  D +
Sbjct: 176 KSGWE-RDLFVGAALIDMYAKCGCVM-DAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           +   R M  + V P+  TLV+V  + ++++    L  GR++HG   R G + N  +  AL
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVA---CLPYGREIHGFGWRHGFQSNDKVKTAL 290

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G V  A  LF+   ++ +VSWN I++  + +   + A+    +M  +  +PD 
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMR-KEDRPDH 349

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++   VL ACS   +LD G+ ++   +R+  +       + ++D+  +C +++     +D
Sbjct: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD---EAYD 406

Query: 344 FISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
            I +  +     +W A++     +G  E  E AL   I++E
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELE 447


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 345/581 (59%), Gaps = 24/581 (4%)

Query: 303 KEIHAYALRNDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           K+IHA+++R+ +   N  F    +  +      +    ++F+ I    I  WN MI G+ 
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++E    A+ LF +M   + + P+  T   +  A  +       EGIH   ++ G    R
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           +VQN+L+ MYS  G  E +  +F+ M  RD V+WN++I G+ + G   +AL L REM + 
Sbjct: 172 FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
             E                 P+  T++++L  C  L ALA G+ +H Y ++  L  +   
Sbjct: 232 GVE-----------------PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +AL+D+Y+KCG    A++VFD M  R+V++W  +I+   ++G G E L+L   +  +G 
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG- 333

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               +KP+E+TF+ +  ACSH GM+ EG + F +MK++YGI P  +H+ C+VDLL RAGK
Sbjct: 334 ----LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           V DAY  I  MP     A  W +LLGAC IH ++E+GE+A   +  LE   +  +VLLSN
Sbjct: 390 VGDAYDYIRNMPVP-PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSN 448

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           +Y+S + W    +VRK M   GV+K PG S +E  + +++F+ GD SH QSE+ +  L  
Sbjct: 449 LYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAK 508

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           +++ ++ EGYVP T  VL ++ EEEKET L  H+EK+AIAF ++NTPPGT IR+ KNLRV
Sbjct: 509 ITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRV 568

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH A K ISK+  REII+RD  RFHHFK+G+CSC DYW
Sbjct: 569 CADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 143/261 (54%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +R  A S     A+  + +M   S I PD   FP + KAVA + D+SLG+ IH+ 
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV+ G+  S   V N+LV+MY   G      Y+VF+ ++ +D+V+WNS+I      G  +
Sbjct: 162 VVRNGFD-SLRFVQNSLVHMYSVFGF-AESAYQVFEIMSYRDRVAWNSVINGFALNGMPN 219

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL  +R M    VEP  FT+VS+  AC  L     L LG +VH   ++VG   N    N
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELG---ALALGERVHMYMVKVGLVQNQHASN 276

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ +Y+K G   DA+ +F   E+R +VSW +++  L+ N    EA+    ++  +G+KP
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 282 DGVSIASVLPACSHLEMLDTG 302
             ++   VL ACSH  MLD G
Sbjct: 337 SEITFVGVLYACSHCGMLDEG 357



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 187/392 (47%), Gaps = 11/392 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIHA  +++G    +      L+       + M    ++F++I   +  +WN+MI    
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 157 RFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                  A+E F +M   S++ P + T   +  A + L     + LG  +H   +R G +
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLM---DVSLGEGIHSVVVRNGFD 168

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
              F+ N+L+ MY+  G  + A  +F+    RD V+WN++++  + N    EA+   R+M
Sbjct: 169 SLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G++PDG ++ S+L AC  L  L  G+ +H Y ++   L+ N    +AL+D+Y  C  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG-LVQNQHASNALLDLYSKCGN 287

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               ++VFD + ++ +  W ++I G   N    EAL LF ++E   GL P+  T   V+ 
Sbjct: 288 FRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER-QGLKPSEITFVGVLY 346

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEV-RD 451
           AC       D+   +   +K   G    +++   ++D+  R G++  +     +M V  +
Sbjct: 347 ACSHC-GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPN 405

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            V W T++   TI G      +   E+Q +E+
Sbjct: 406 AVIWRTLLGACTIHGHLELGEVARAEIQRLEQ 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   +   A +    EA+  Y EM    ++PD F   ++L A   +  L+LG+++
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERV 259

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H ++VK G  + +   +N L+++Y KCG +  D  KVFD + E+  VSW S+I  L   G
Sbjct: 260 HMYMVKVGL-VQNQHASNALLDLYSKCG-NFRDAQKVFDEMEERSVVSWTSLIVGLAVNG 317

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
             + AL+ F  +    ++PS  T V V  ACS+    D
Sbjct: 318 LGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLD 355



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 39/189 (20%)

Query: 514 CGALSALAKGKEIHAYAIRNMLAT-----DVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           CG  S+ +K K+IHA++IR+ +       +  +  ALV + A    ++FA ++F+ +   
Sbjct: 44  CG--SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAP 98

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS------- 621
           N+ TWN +I  +         +EL   M A  S    + P+  TF  LF A +       
Sbjct: 99  NIFTWNTMIRGFAESENPSPAVELFSQMHAASS----ILPDTHTFPFLFKAVAKLMDVSL 154

Query: 622 ----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
               HS +V  G D    +++             +V +    G  E AYQ+  +M   + 
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNS------------LVHMYSVFGFAESAYQVFEIM--SYR 200

Query: 678 KAGAWSSLL 686
              AW+S++
Sbjct: 201 DRVAWNSVI 209


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/672 (36%), Positives = 377/672 (56%), Gaps = 62/672 (9%)

Query: 246 RDLVS----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           +DLVS    +   V  L Q  +  EAV  L +   R   P     ++++ AC     L+ 
Sbjct: 49  KDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHR---PSARVYSTLIAACVRHRALEL 105

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+ +HA+   ++  +   F+ + L+DMY  C  +   + +FD +  + +  WN MI GY 
Sbjct: 106 GRRVHAHTKASN-FVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYA 164

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR----------------SEAFPDK 405
           +    E+A  LF +M +      NA     V     R                S  F   
Sbjct: 165 KLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLS 224

Query: 406 ---------------EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
                          + IHG+ I+  L  D  V +AL+D+Y + G ++ ++ IFD M+ R
Sbjct: 225 SALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR 284

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSW TMI      G+  +  +L R               DL ++ +RP  N  T   V
Sbjct: 285 DVVSWTTMIHRCFEDGRREEGFLLFR---------------DLMQSGVRP--NEYTFAGV 327

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C   +A   GKE+H Y +           SALV MY+KCG    ARRVF+ M   ++
Sbjct: 328 LNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDL 387

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++W  +I+ Y  +G+  E L   + ++  G+     KP++VT++ + +AC+H+G+V +G+
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGT-----KPDQVTYVGVLSACTHAGLVDKGL 442

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
           + F+ +K+ +G+  + DHYACV+DLL R+G+ ++A  +I+ MP + DK   W+SLLG CR
Sbjct: 443 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKF-LWASLLGGCR 501

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH N+E+ + AA+ L+ +EP+  + Y+ L+NIY++A LW +  +VRK M  MG+ K+PG 
Sbjct: 502 IHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGK 561

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SWIE   ++H FL GD SH ++  +H FL  LS+++++EGYVPDT+ VLH+V EE+KE  
Sbjct: 562 SWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQN 621

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLA+ FGI++TPPGT I+V KNLR C DCH A K+ISKI  R+I +RD  RFH 
Sbjct: 622 LVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHC 681

Query: 871 FKNGTCSCGDYW 882
           F++G+CSC DYW
Sbjct: 682 FEDGSCSCKDYW 693



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 220/458 (48%), Gaps = 49/458 (10%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           + R+D +P    +  ++ A    + L LG+++HAH     + +  V ++N L++MY KCG
Sbjct: 78  LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNF-VPGVFISNRLLDMYAKCG 136

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK------------------WDL------ 163
           S + D   +FD +  +D  SWN+MI    + G+                  W+       
Sbjct: 137 S-LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYV 195

Query: 164 -------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  ALE FR+M     E SS    +++ A +  +    LRLG+++HG  +R     
Sbjct: 196 THNQPREALELFRVM--QRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNL 253

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +  + +AL+ +Y K G +D+A+ +F   +DRD+VSW T++    ++ +  E  +  R + 
Sbjct: 254 DEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLM 313

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G++P+  + A VL AC+       GKE+H Y +        SF  SALV MY  C   
Sbjct: 314 QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAG-YDPGSFAISALVHMYSKCGNT 372

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              RRVF+ +    +  W ++I GY QN   +EAL  F  + + +G  P+  T   V+ A
Sbjct: 373 RVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQ-SGTKPDQVTYVGVLSA 431

Query: 396 CVRSEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVR- 450
           C  +    DK   + H+IK   G     D Y    ++D+ +R GR + ++ I D+M V+ 
Sbjct: 432 CTHA-GLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSGRFKEAENIIDNMPVKP 488

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           D   W +++ G   C  HG+  +  R  + + E +  N
Sbjct: 489 DKFLWASLLGG---CRIHGNLELAKRAAKALYEIEPEN 523



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 231/520 (44%), Gaps = 72/520 (13%)

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNAL 223
           EA  ++  ++  PS+    ++  AC    R   L LGR+VH ++ +   +    FI N L
Sbjct: 73  EAVELLHRTDHRPSARVYSTLIAACV---RHRALELGRRVHAHT-KASNFVPGVFISNRL 128

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G + DA+ LF     RDL SWNT++   ++  +  +A     +M  R      
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN 188

Query: 284 VSIASVLPACSHLEMLD--------------------------------TGKEIHAYALR 311
            +I+  +      E L+                                 GKEIH Y +R
Sbjct: 189 AAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIR 248

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            ++ +D   V SAL+D+Y  C  ++  R +FD + D+ +  W  MI    ++   EE  +
Sbjct: 249 TELNLD-EVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFL 307

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF  + + +G+ PN  T + V+ AC    A    + +HG+ +  G     +  +AL+ MY
Sbjct: 308 LFRDLMQ-SGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMY 366

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           S+ G   +++ +F++M   D VSW ++I GY   GQ  +AL                   
Sbjct: 367 SKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFF---------------- 410

Query: 492 DLDETVLRP--KPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDM 548
              E +L+   KP+ +T + VL  C     + KG E  H+   ++ L       + ++D+
Sbjct: 411 ---ELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 467

Query: 549 YAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
            A+ G    A  + D MPV+ +   W  ++    +HG     LEL K          E++
Sbjct: 468 LARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGN----LELAKRAAKALY---EIE 520

Query: 608 P-NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           P N  T+I L    +++G+ SE  ++   M D+ GI   P
Sbjct: 521 PENPATYITLANIYANAGLWSEVANVRKDM-DNMGIVKKP 559



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       +  E  L + ++ +S ++P+ + F  VL A A      LGK++H ++
Sbjct: 288 SWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYM 347

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  GY   S  ++  LV+MY KCG+      +VF+ + + D VSW S+I    + G+ D 
Sbjct: 348 MHAGYDPGSFAIS-ALVHMYSKCGNTRV-ARRVFNEMHQPDLVSWTSLIVGYAQNGQPDE 405

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           AL  F ++L S  +P   T V V  AC++
Sbjct: 406 ALHFFELLLQSGTKPDQVTYVGVLSACTH 434


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 278/828 (33%), Positives = 444/828 (53%), Gaps = 68/828 (8%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           D  L + +HA  +K       + + N L++ Y K G  + D  KVF  ++  + VS+ ++
Sbjct: 112 DPDLARAVHAQFLKLE---EDIFLGNALISAYLKLGL-VRDADKVFSGLSCPNVVSYTAL 167

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I+   +    D A+E F  ML S +EP+ +T V++  AC    R    +LG QVHG  ++
Sbjct: 168 ISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACI---RNMDYQLGSQVHGIVVK 224

Query: 212 VGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G  +  FI NALM +Y K G +D    LF+   +RD+ SWNT++SSL +  K+ EA  +
Sbjct: 225 LGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDY 284

Query: 271 LRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            R M L +G+K D  S++++L AC+       G+++HA AL+   L  +  V S+L+  Y
Sbjct: 285 FRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVG-LESHLSVSSSLIGFY 343

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGY----------------------------- 360
             C        +F+ +  + +  W  MIT Y                             
Sbjct: 344 TKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLA 403

Query: 361 --GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
              +N+    AL LFI+M E  G+  +  T++S++ AC   ++F   + I G  +K G+ 
Sbjct: 404 GLSRNDDGSRALELFIEMLE-EGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGIL 462

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIF--DDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
            +  ++ AL+DMY+R GR+E ++ IF    +E   T    +MI GY   G+  +A+ L  
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
             Q+            +DE         +   ++L  CG++     G ++H +A+++ L 
Sbjct: 523 SGQS-------EGAIVMDE---------VMSTSILSLCGSIGFHEMGMQMHCHALKSGLI 566

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           T+  VG+A V MY+KC  ++ A RVF+ M ++++++WN ++  + +H +G + L + K M
Sbjct: 567 TETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHS--GMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
              G     +KP+ +TF  + +A  H+   +V     LF  M+ ++ I+P+ +HYA  + 
Sbjct: 627 EKAG-----IKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFIS 681

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           +LGR G +E+A Q I  MP E D    W +LL +CRI++N  + ++AA+N+  +EP    
Sbjct: 682 VLGRWGLLEEAEQTIRNMPLEPD-VYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            Y+L SN+YS++  W  +  VR+ M+E G RK P  SWI   ++IH F A D SH Q + 
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L     K GYVPDTS VL  V E +K+  L  HS KLA  FGIL T PG  I+
Sbjct: 801 IYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQ 860

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KN+R+C DCH   K++S +  R+I+LRD   FH F +G CSC DYW
Sbjct: 861 IVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/520 (44%), Positives = 326/520 (62%), Gaps = 24/520 (4%)

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           GL  +  T+  V+ +C           +HG  +++GL  D YV  +L+DMY + G I  +
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEE 484
           + +FD M VRD  SWN +I GY   G+ G A  L   M                QN   E
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
           +      ++ +     KPN +T+++VLP C   +AL +G+ IH +A    L  +  V +A
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 281

Query: 545 LVDMYAKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           L  MYAKC  L  AR  FD++    +N+I WN +I AY  HG G E + + +NM+  G  
Sbjct: 282 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAG-- 339

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              V+P+ VTF+ L + CSHSG++  G++ F  M   + +EP  +HYACVVDLLGRAG++
Sbjct: 340 ---VQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRL 396

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            +A +LI+ MP +   +  W +LL ACR H+N+EI E+AA+ LF+LEPD + +YVLLSN+
Sbjct: 397 VEAKELISQMPMQAGPS-VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNL 455

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A +W++   +R  +K  G++K PGCSWIE   + H F+  D SH Q+++++ FLE L
Sbjct: 456 YAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEAL 515

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            E+++  GY+PDTS VLH+++EEEKE  L  HSEKLAIAFG+LNT PG  +RV KNLR+C
Sbjct: 516 PEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRIC 575

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH ATKFISKI  REII+RD+ RFH FK+G+CSCGDYW
Sbjct: 576 GDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 170/374 (45%), Gaps = 63/374 (16%)

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           LEA+  M +  +   +FTL  V  +C++LSR   + +GR VHG  LRVG E + ++  +L
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSR---VCMGRCVHGQGLRVGLEGDFYVGASL 148

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI----------------------------- 254
           + MY K G + DA+ LF     RD+ SWN +                             
Sbjct: 149 IDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWT 208

Query: 255 --VSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
             +S  +QN    +A+    +M   G  +KP+ V+I SVLPAC+    L+ G+ IH +A 
Sbjct: 209 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA- 267

Query: 311 RNDI-LIDNSFVGSALVDMYCNCREVECGRRVFDFISD--KKIALWNAMITGYGQNEYDE 367
            N I L  NS V +AL  MY  C  +   R  FD I+   K +  WN MIT Y  +    
Sbjct: 268 -NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 326

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRD 420
           EA+ +F  M   AG+ P+A T   ++  C  S         F D   IH    ++    +
Sbjct: 327 EAVSIFENMLR-AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV----E 381

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD---ALMLLR 476
            Y    ++D+  R GR+  +K +   M ++   S W  ++     C  H +   A +  R
Sbjct: 382 HYA--CVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA---CRSHRNLEIAELAAR 436

Query: 477 EMQNMEEEKNRNNV 490
            +  +E + + N V
Sbjct: 437 RLFVLEPDNSGNYV 450



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 41/275 (14%)

Query: 64  SYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           +Y  M    +  DNF  P VLK+ A +  + +G+ +H   ++ G       V  +L++MY
Sbjct: 94  AYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLE-GDFYVGASLIDMY 152

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV------- 176
            KCG  + D  K+FD++  +D  SWN++IA   + G+  +A + F  M + N+       
Sbjct: 153 VKCGV-IGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211

Query: 177 --------------------------EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
                                     +P+  T+VSV  AC+   +   L  GR++H  + 
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACA---QSAALERGRRIHDFAN 268

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEA 267
            +G   N+ +  AL  MYAK   + +A+  F       ++L++WNT++++ + +   +EA
Sbjct: 269 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 328

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           V     M   G++PD V+   +L  CSH  ++D G
Sbjct: 329 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 363



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 55/356 (15%)

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M   G+  D  ++  VL +C+ L  +  G+ +H   LR   L  + +VG++L+DMY  C
Sbjct: 97  RMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG-LEGDFYVGASLIDMYVKC 155

Query: 333 REVECGRRVFDFISDKKIALWNA-------------------------------MITGYG 361
             +   R++FD +  + +A WNA                               MI+GY 
Sbjct: 156 GVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYT 215

Query: 362 QNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
           QN + E+AL LF +M ++ + + PN  T+ SV+PAC +S A      IH  A  +GL  +
Sbjct: 216 QNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLN 275

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICGQHGDALMLLREM 478
             VQ AL  MY++   +  ++  FD +    ++ ++WNTMIT Y     HG  +  +   
Sbjct: 276 SSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA---SHGCGVEAVSIF 332

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLAT 537
           +NM     R  V          +P+++T M +L GC     +  G    +     + +  
Sbjct: 333 ENML----RAGV----------QPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEP 378

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLEL 592
            V   + +VD+  + G L  A+ +   MP++     W  ++ A   H    E+ EL
Sbjct: 379 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH-RNLEIAEL 433


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/718 (36%), Positives = 393/718 (54%), Gaps = 35/718 (4%)

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAK 229
           L+    P + T V +A    +  R   LR GR +H   +  G    +TF+ N L+ MY+ 
Sbjct: 9   LWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 68

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
              +  A  LF +   R+ VSW T+VS LSQN    +A+     M   G+ P   +++S 
Sbjct: 69  CADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSA 128

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDK 348
             A + L     G ++H   +R  +  D   FV S L DMY  C  +    RVFD +  K
Sbjct: 129 ARAAAALGAPLPGAQLHCVGVR--LGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK 186

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD---K 405
               W AMI GY +N   E A++ F  M+    +  +     SV+ A   S    D    
Sbjct: 187 DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLS 243

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE-ISKTIFDDMEVRDTVSWNTMITGYTI 464
           + IH    K G   +  V+NAL+DMY++   +E  S+ +  D    + VS  +MI GY  
Sbjct: 244 KSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIE 303

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
                +AL++  E++    E                 PN  T  +++ GC   + L +G 
Sbjct: 304 TDCVEEALVIYVELRRQGVE-----------------PNEFTFSSMIKGCAMQALLEQGA 346

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           ++HA  I+  L  D  VGS LVDMY KCG ++ + ++F+ +  R  I WN +I  +  HG
Sbjct: 347 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHG 406

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G+E ++    M+  G     ++PN + F++L  ACSH+G+V EG+  FY MK+ +GIEP
Sbjct: 407 HGREAIQAFDRMIYSG-----IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEP 461

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HY+C++D  GRAG++++AY+ I+ MP + +  G W SLLGACR+  + E+GE+AAQN
Sbjct: 462 KEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG-WCSLLGACRMRGSKELGEVAAQN 520

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           L  LEP     +V LS IY+S   W+    VRK M++  ++K PG SW++   + H F +
Sbjct: 521 LMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGS 580

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D SH Q + ++  LE L+ R+++EGY+PDTS +  N+ +  KE +L  HSE++A+AF +
Sbjct: 581 EDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFAL 640

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++ P    I V KNLR+C DCH A KFI K+E R+II+RD  RFHHF NG CSCGDYW
Sbjct: 641 ISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 236/518 (45%), Gaps = 38/518 (7%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
             ++L++     DL  G+ +HA +V  G   +S  +AN L+ MY  C +D+    ++F  
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHC-ADLASALRLFAA 81

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  ++ VSW ++++ L +      AL AF  M  + V P+ F L S A A + L      
Sbjct: 82  MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA---P 138

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G Q+H   +R+G +   F+ + L  MY+K G + +A  +F     +D V+W  ++   
Sbjct: 139 LPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGY 198

Query: 259 SQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           ++N     AV+  R M   G +  D     SVL A   L+     K IH    +    ++
Sbjct: 199 AKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE 258

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN-----AMITGYGQNEYDEEALML 372
            + V +AL+DMY    +VE   RV           WN     +MI GY + +  EEAL++
Sbjct: 259 VA-VRNALIDMYAKSMDVESASRVLKIDPGG----WNVVSGTSMIDGYIETDCVEEALVI 313

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           ++++    G+ PN  T SS++  C           +H   IK  L RD +V + L+DMY 
Sbjct: 314 YVELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYG 372

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G I +S  +F+++E R  ++WN +I    +  QHG                 R  +  
Sbjct: 373 KCGLISLSMQLFNEIEYRTDIAWNAVI---NVFAQHG---------------HGREAIQA 414

Query: 493 LDETVLRP-KPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYA 550
            D  +    +PN I  +++L  C     + +G K  ++    + +       S ++D Y 
Sbjct: 415 FDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYG 474

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           + G L+ A +    MP++ N   W  ++ A  M G  +
Sbjct: 475 RAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 512



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 11/181 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA++ Y+E+ R  ++P+ F F +++K  A    L  G Q+HA V+K      S  V +TL
Sbjct: 309 EALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF-VGSTL 367

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+MYGKCG     + ++F+ I  +  ++WN++I    + G    A++AF  M+YS + P+
Sbjct: 368 VDMYGKCGLISLSM-QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 426

Query: 180 SFTLVSVALACSNLSRRD-GLRLG---RQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
               VS+  ACS+    D GL+     ++ HG   +   ++  I       Y + GR+D+
Sbjct: 427 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCII-----DTYGRAGRLDE 481

Query: 236 A 236
           A
Sbjct: 482 A 482


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/674 (36%), Positives = 377/674 (55%), Gaps = 74/674 (10%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N+ ++  L++    L  +D A ++F+ F+  +L  +N ++  L++N +F  +V     M 
Sbjct: 71  NSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLML 130

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              I+PD +++  VL + + L  +  G+ +H   ++  +  D SFV  +LVDMY    E+
Sbjct: 131 RLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFD-SFVRVSLVDMYVKIGEL 189

Query: 336 ECGRRVFDFISDKK----IALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMS 390
             G ++FD    +     I LWN +I G  +     +A  LF  M E  AG W       
Sbjct: 190 GFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSW------- 242

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
                                             N+L++ + R G ++ ++ +F  M  +
Sbjct: 243 ----------------------------------NSLINGFVRNGDLDRARELFVQMPEK 268

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           + VSW TMI G++  G H  AL +   M              L+E V   +PN +T+++ 
Sbjct: 269 NVVSWTTMINGFSQNGDHEKALSMFWRM--------------LEEGV---RPNDLTVVSA 311

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C  + AL  G+ IH Y   N    +  +G+ALVDMYAKCG +  A RVF     +++
Sbjct: 312 LLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDL 371

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           +TW+V+I  + +HG   + L+    M + G     + P+EV F+A+  ACSHSG V +G+
Sbjct: 372 LTWSVMIWGWAIHGCFDQALQCFVKMKSAG-----INPDEVIFLAILTACSHSGNVDQGL 426

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGA 688
           + F  M+ DY IEP+  HY  +VDLLGRAG++++A   I  MP  P+F     W +L  A
Sbjct: 427 NFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFV---IWGALFCA 483

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR H+N+E+ E+ A+ L  LEP     YV LSN+Y++   W+    VR  MK  GV K+P
Sbjct: 484 CRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDP 543

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G S+IE   ++H F+AGD +H ++E++   LE ++   ++EGY+P+T+ VLHN+ EEEKE
Sbjct: 544 GWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKE 603

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             L  HSEKLA+AFG+++T PG+TIR+ KNLRVC DCH   K+ SK+  REIILRD++RF
Sbjct: 604 DALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRF 663

Query: 869 HHFKNGTCSCGDYW 882
           HHFK+GTCSCGDYW
Sbjct: 664 HHFKDGTCSCGDYW 677



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 203/444 (45%), Gaps = 61/444 (13%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A +++F  ++  ++ M R  I+PD    P VLK+VA + D+ LG+ +H  V+K G 
Sbjct: 110 IRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGL 169

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS----WNSMIATLCRFGKWDLA 164
              S  V  +LV+MY K G   + + ++FD   ++++      WN +I   C+ G    A
Sbjct: 170 EFDSF-VRVSLVDMYVKIGELGFGL-QLFDESPQRNKAESILLWNVLINGCCKVGDLSKA 227

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALM 224
              F  M   N                                     G WN+ I     
Sbjct: 228 ASLFEAMPERNA------------------------------------GSWNSLING--- 248

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
             + + G +D A+ LF    ++++VSW T+++  SQN    +A+    +M   G++P+ +
Sbjct: 249 --FVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDL 306

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           ++ S L AC+ +  L  G+ IH Y   N   + N  +G+ALVDMY  C  ++   RVF  
Sbjct: 307 TVVSALLACTKIGALQVGERIHNYLSSNGFQL-NRGIGTALVDMYAKCGNIKSASRVFVE 365

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
              K +  W+ MI G+  +   ++AL  F+KM+  AG+ P+     +++ AC  S    D
Sbjct: 366 TKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS-AGINPDEVIFLAILTACSHSGNV-D 423

Query: 405 KEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
           +      +++L    +  +++   ++D+  R GR++ + +    M +  D V W  +   
Sbjct: 424 QGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGAL--- 480

Query: 462 YTICGQHGDALMLLREMQNMEEEK 485
           +  C  H +      EM  +  EK
Sbjct: 481 FCACRAHKNI-----EMAELTAEK 499



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 18/219 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++    +A+  +  M    ++P++    + L A   I  L +G++IH ++
Sbjct: 272 SWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYL 331

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G+ L+   +   LV+MY KCG ++    +VF     KD ++W+ MI      G +D 
Sbjct: 332 SSNGFQLNR-GIGTALVDMYAKCG-NIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQ 389

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN-------LSRRDGLRLGRQVHGNSLRVGEWN 216
           AL+ F  M  + + P     +++  ACS+       L+  + +RL   +        +  
Sbjct: 390 ALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTM----KHY 445

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTI 254
           T I++ L     + GR+D+A +  +S   + D V W  +
Sbjct: 446 TLIVDLL----GRAGRLDEALSFIQSMPINPDFVIWGAL 480



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 52/292 (17%)

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P+ +  +  +P    S   P    IH       L  +  V   L+     +  ++ + +I
Sbjct: 35  PSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94

Query: 444 FDDMEVRDTVSWNTMITGYT----ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           F   +  +   +N +I G        G     +++LR                     L 
Sbjct: 95  FRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLR---------------------LS 133

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            +P+ +TL  VL    AL  +  G+ +H   ++  L  D  V  +LVDMY K G L F  
Sbjct: 134 IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGL 193

Query: 560 RVFDLMPVRN----VITWNVIIMAYGMHGEGQEVLELLKNMVAEGS-----------RGG 604
           ++FD  P RN    ++ WNV+I      G+  +   L + M    +           R G
Sbjct: 194 QLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNG 253

Query: 605 EV-----------KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           ++           + N V++  +    S +G   + + +F++M ++ G+ P+
Sbjct: 254 DLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEE-GVRPN 304


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 267/821 (32%), Positives = 439/821 (53%), Gaps = 75/821 (9%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K GS + D  ++FDR+  +D  SWN++++   +  ++   LE F  M
Sbjct: 70  NVITHNIMMNGYAKQGS-LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128

Query: 172 LYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--------------- 215
             S +  P++FT   V  +C  L  R+   L  Q+ G   +   W               
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRE---LAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 216 -----------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
                              F  N+++A YAKL  +D A   F+   +RD+VSWN ++++L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           SQ+ +  EA+  + +M  +G++ D  +  S L AC+ L  L  GK++HA  +R+   ID 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID- 304

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME- 377
            +V SAL+++Y  C   +  +RVF+ + D+    W  +I G  Q E   +++ LF +M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E+  +  +   +++++  C           +H   +K G  R   V N+L+ +Y++ G +
Sbjct: 365 ELMAI--DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 422

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICG------QHGDAL----------MLLREMQNM 481
           + ++ +F  M  RD VSW +MIT Y+  G      +  D +          ML   +Q+ 
Sbjct: 423 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHG 482

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
            EE     +Y    +     P+ +T +T+  GC  + A   G +I  + ++  L  +V V
Sbjct: 483 AEEDGLK-MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +A + MY+KCG ++ A+++FDL+  ++V++WN +I  Y  HG G++  +   +M+++G+
Sbjct: 542 ANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA 601

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                KP+ ++++A+ + CSHSG+V EG   F  M   +GI P  +H++C+VDLLGRAG 
Sbjct: 602 -----KPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGH 656

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           + +A  LI+ MP +   A  W +LL AC+IH N E+ E+AA+++F L+   +  Y+LL+ 
Sbjct: 657 LTEAKDLIDKMPMK-PTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IYS A   D +  VRK M++ G++K PG SW+E  +++H F A D SH Q   +   L+ 
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDE 775

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L E++   GYV             E       HSEKLA+AFGI++ P    I + KNLR+
Sbjct: 776 LMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRI 824

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K IS +  RE ++RD  RFHHFK+G+CSCGDYW
Sbjct: 825 CGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 223/470 (47%), Gaps = 61/470 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   +EM R  ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ L+ +Y KCGS   +  +VF+ + +++ VSW  +I    ++  +
Sbjct: 297 IR---SLPQIDPYVASALIELYAKCGS-FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 352

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C N   R  L LGRQ+H   L+ G     ++ 
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCFN---RMDLCLGRQLHSLCLKSGHNRAIVVS 409

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--- 277
           N+L+++YAK G + +A+ +F S  +RD+VSW +++++ SQ    ++A  F   M  R   
Sbjct: 410 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAI 469

Query: 278 -----------------GIK------------PDGVSIASVLPACSHLEMLDTGKEIHAY 308
                            G+K            PD V+  ++   C+ +     G +I  +
Sbjct: 470 TWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGH 529

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  ++++ S V +A + MY  C  +   +++FD ++ K +  WNAMITGY Q+   ++
Sbjct: 530 TVKAGLILNVS-VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGRDR 421
           A   F  M    G  P+  +  +V+  C  S     +EG          H I  GL    
Sbjct: 589 AAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLV--QEGKLYFDMMTRVHGISPGLEH-- 643

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
              + ++D+  R G +  +K + D M ++ T   W  +++    C  HG+
Sbjct: 644 --FSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA---CKIHGN 688



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 263/608 (43%), Gaps = 107/608 (17%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+    +C  LS  D  RL R        + E N    N +M  YAK G + DA+ LF 
Sbjct: 44  TLLHAYFSCGALS--DARRLLRA------DIKEPNVITHNIMMNGYAKQGSLSDAEELFD 95

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q  +FL+ +     M   G   P+  +   V+ +C  L   +
Sbjct: 96  RMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--------------- 345
              ++     + D   D   V +ALVDM+  C  V+   R+F  I               
Sbjct: 156 LAPQLLGLFWKFDFWGDPD-VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214

Query: 346 ----------------SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                           +++ +  WN MI    Q+    EAL L ++M    G+  ++TT 
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR-KGVRLDSTTY 273

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S + AC R  +    + +H   I+     D YV +AL+++Y++ G  + +K +F+ ++ 
Sbjct: 274 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R++VSW  +I G         ++ L  +M        R  +  +D+           L T
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVELFNQM--------RAELMAIDQ---------FALAT 376

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN------------- 556
           ++ GC     L  G+++H+  +++     +VV ++L+ +YAKCG L              
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 557 ------------------FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                              AR  FD M  RN ITWN ++ AY  HG  ++ L++   M++
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLG 657
           +     +V P+ VT++ LF  C+  G    G  +  + +K    +  S  + A  + +  
Sbjct: 497 Q----KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA--ITMYS 550

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL-----EPDV 712
           + G++ +A +L +++  +     +W++++     H    +G+ AA+    +     +PD 
Sbjct: 551 KCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGAKPDY 605

Query: 713 ASHYVLLS 720
            S+  +LS
Sbjct: 606 ISYVAVLS 613



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 38/299 (12%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q R   SW   +    +   F +++  + +M    +  D FA   ++       DL LG+
Sbjct: 332 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 391

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H+  +K G+   ++ V+N+L+++Y KCG D+ +   VF  ++E+D VSW SMI    +
Sbjct: 392 QLHSLCLKSGHN-RAIVVSNSLISLYAKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQ 449

Query: 158 FGK------------------WDLALEAF--------------RMMLYSNVEPSSFTLVS 185
            G                   W+  L A+               M+   +V P   T V+
Sbjct: 450 IGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           +   C+++      +LG Q+ G++++ G   N  + NA + MY+K GR+ +A+ LF    
Sbjct: 510 LFRGCADIGAN---KLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 566

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            +D+VSWN +++  SQ+    +A      M  +G KPD +S  +VL  CSH  ++  GK
Sbjct: 567 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 139/366 (37%), Gaps = 91/366 (24%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL-------------------- 427
            ++  + +C    A      +HG  + +GL    ++QN L                    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 428 ------------MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
                       M+ Y++ G +  ++ +FD M  RD  SWNT+++GY    +  D L   
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M    +                  PN+ T   V+  CGAL       ++     +   
Sbjct: 126 VSMHRSGDS----------------LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDF 169

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRV-------------------------------FDL 564
             D  V +ALVDM+ +CG ++FA R+                               F+ 
Sbjct: 170 WGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFED 229

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  R+V++WN++I A    G  +E L L+  M  +G     V+ +  T+ +   AC+   
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-----VRLDSTTYTSSLTACARLF 284

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            +  G  L  K+       P  D Y  + +++L  + G  ++A ++ N +      + +W
Sbjct: 285 SLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSW 339

Query: 683 SSLLGA 688
           + L+G 
Sbjct: 340 TVLIGG 345


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/818 (32%), Positives = 437/818 (53%), Gaps = 69/818 (8%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K G  + D  ++F R+  +D  SWN++++   +  ++  +LE+F  M
Sbjct: 70  NVITHNVMLNGYVKLGR-LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSM 128

Query: 172 LYS-NVEPSSFTLVSVALACSNLSRRD------GL--RLGRQVHGNS------------- 209
             S +  P++FT      +C  L  R       G+  + G Q   +              
Sbjct: 129 HRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGT 188

Query: 210 --------LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
                   +R+ E   F  N+++  Y K   VD A  LF S  +RD+VSWN +VS+LSQ+
Sbjct: 189 VDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EA+  +  M  +G++ D  +  S L AC+ L  L  GK++HA  +RN   ID  +V
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCID-PYV 307

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVA 380
            SALV++Y  C   +  + VF+ + D+    W  +I G+ Q+    E++ LF +M  E+ 
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            L  +   +++++  C           +H   +K G  +   V N+L+ MY++   ++ +
Sbjct: 368 TL--DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDA----------------LMLLREMQNMEEE 484
           ++IF  M  +D VSW +MIT ++  G    A                 ML   +Q+  EE
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEE 485

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                +Y++  +    +P+ +T +T+  GC  L A   G +I    ++  L  D  V +A
Sbjct: 486 DGLR-MYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA 544

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           ++ MY+KCG +  AR+VFD + V+++++WN +I  Y  HG G++ +E+  +++  G+   
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA--- 601

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
             KP+ ++++A+ + CSHSG+V EG   F  MK  + I P  +H++C+VDLLGRAG + +
Sbjct: 602 --KPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTE 659

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           A  LI+ MP +   A  W +LL AC+IH N E+ E+AA+++F L+   +  Y+L++ IY+
Sbjct: 660 AKDLIDEMPMK-PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYA 718

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
            A   D +  +RK M++ G++K PG SW+E  +++H F A D SH Q   +   L+ L E
Sbjct: 719 DAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELME 778

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           ++ + GYV          +    E     HSEKLA+AFG+++ P    I + KNLR+C D
Sbjct: 779 KIARLGYV--------RTDSPRSEI---HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGD 827

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH   K IS +  RE ++RD  RFHHF  G+CSCGDYW
Sbjct: 828 CHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 237/507 (46%), Gaps = 70/507 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   ++M    ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ LV +Y KCG    +   VF+ + +++ V+W  +IA   + G +
Sbjct: 297 IR---NLPCIDPYVASALVELYAKCGC-FKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCF 352

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C   SR D L LGRQ+H   L+ G+    ++ 
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCC--SRMD-LCLGRQLHSLCLKSGQIQAVVVS 409

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           N+L++MYAK   +  A+++F+   ++D+VSW +++++ SQ     +A  F   M+ +   
Sbjct: 410 NSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVI 469

Query: 279 ------------------------------IKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
                                         ++PD V+  ++   C+ L     G +I   
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  +++D S V +A++ MY  C  +   R+VFDF++ K I  WNAMITGY Q+   ++
Sbjct: 530 TVKVGLILDTS-VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 588

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG-----HAIKLGLGRDRYV 423
           A+ +F  + +  G  P+  +  +V+  C  S    + +         H I  GL      
Sbjct: 589 AIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEH---- 643

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
            + ++D+  R G +  +K + D+M ++ T   W  +++    C  HG+         N  
Sbjct: 644 FSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA---CKIHGN---------NEL 691

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMT 509
            E    +V++LD     P   S  LM 
Sbjct: 692 AELAAKHVFELDS----PDSGSYMLMA 714



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 261/611 (42%), Gaps = 113/611 (18%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  L     L L    H N            N ++  Y KLGR+ DA  LF 
Sbjct: 44  TLLHAYLSCGALPDARRLLLTDIAHPN--------VITHNVMLNGYVKLGRLSDAVELFG 95

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q+ ++L ++     M   G   P+  + A  + +C  L    
Sbjct: 96  RMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGAL---- 151

Query: 301 TGKEIHAYALRNDILI----DNSFVGSALVDMYCNCREVECGRR---------------- 340
            G+   A  L   +      D+S V +ALVDM+  C  V+   R                
Sbjct: 152 -GERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSM 210

Query: 341 ---------------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
                          +FD + ++ +  WN M++   Q+    EAL + + M+   G+  +
Sbjct: 211 LVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS-KGVRLD 269

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           +TT +S + AC R  +    + +H   I+     D YV +AL+++Y++ G  + +K +F+
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFN 329

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  R+ V+W  +I G+   G   +++ L  +M        R  +  LD+          
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM--------RAELMTLDQ---------F 372

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC------------- 552
            L T++ GC +   L  G+++H+  +++     VVV ++L+ MYAKC             
Sbjct: 373 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFM 432

Query: 553 ------------------GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                             G +  AR  FD M  +NVITWN ++ AY  HG  ++ L +  
Sbjct: 433 NEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYN 492

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M++E     +V+P+ VT++ LF  C+  G    G D         G+         V+ 
Sbjct: 493 VMLSE----KDVRPDWVTYVTLFKGCADLGANKLG-DQIIGRTVKVGLILDTSVANAVIT 547

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----QNVEI-GEIAAQNLFLLE 709
           +  + G++ +A ++ + +        +W++++     H    Q +EI  +I  +     +
Sbjct: 548 MYSKCGRILEARKVFDFL--NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG---AK 602

Query: 710 PDVASHYVLLS 720
           PD  S+  +LS
Sbjct: 603 PDYISYVAVLS 613



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 50/271 (18%)

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR---------- 560
           L  CGA  ALA  + +H   +   LA+ V + + L+  Y  CG L  ARR          
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPN 70

Query: 561 ----------------------VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                                 +F  MP R+V +WN ++  Y    + Q+ L  L++ V+
Sbjct: 71  VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGY---FQSQQYLASLESFVS 127

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
              R G+  PN  TF     +C   G  S  + L   M   +G +   D  A +VD+  R
Sbjct: 128 M-HRSGDSSPNAFTFAYAMKSCGALGERSLALQLL-GMVQKFGSQDDSDVAAALVDMFVR 185

Query: 659 AGKVEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVAS 714
            G V+ A +L   +  P  F +    S L+G  + +     G   A  LF  + E DV S
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRN---SMLVGYVKTY-----GVDHALELFDSMPERDVVS 237

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
             +++S +  S ++  +A+D+   M+  GVR
Sbjct: 238 WNMMVSALSQSGRV-REALDMVVDMQSKGVR 267


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/597 (39%), Positives = 350/597 (58%), Gaps = 28/597 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           + +  C     L  G+++HA  +         ++ + LV MY  C  +E    V D + +
Sbjct: 40  AAITECVGRRALREGRQVHARMVTAGYR-PALYLATRLVIMYARCGALEDAHNVLDGMPE 98

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE- 406
           + +  W AMI+GY QNE   EA  LFI M   AG  PN  T++SV+ +C  S+     + 
Sbjct: 99  RNVVSWTAMISGYSQNERPAEAWDLFIMMLR-AGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 407 -GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H  AIK       +V ++L+DMY+R   I+ ++ +FD +  RD VS+ T+++GYT  
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +AL L R++ N   + N+                 +T   +L     LS++  GK+
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQ-----------------VTFSVLLNALSGLSSMDYGKQ 260

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H   +R  L   + + ++L+DMY+KCG L ++RRVFD MP R+V++WN ++M YG HG 
Sbjct: 261 VHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGM 320

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             EV++L + M        +VKP+ VT +A+    SH G+V EG+D+F  +  +     +
Sbjct: 321 AYEVVQLFRFMC------DKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLN 374

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY CV+DLLGR+G++E A  LI  MP +  +A  W SLLGACR+H NV +GE  AQ L
Sbjct: 375 TQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRA-IWGSLLGACRVHANVHVGEFVAQKL 433

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
           F +EP+ A +YV+LSNIY++A++W     +RK M +  V KEPG SW+     IH F + 
Sbjct: 434 FDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSS 493

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           +  H + E ++  +  +   ++  G+VPD SCVLH+V++E+KE +L GHSEKLAI FG++
Sbjct: 494 ERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 553

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +TP   TI+V KNLR+C DCH   KF+SK+  REI LRD  RFH    G C+CGDYW
Sbjct: 554 STPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 202/385 (52%), Gaps = 13/385 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + A +    G + L  G+Q+HA +V  GY   ++ +A  LV MY +CG+ + D + V D 
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYR-PALYLATRLVIMYARCGA-LEDAHNVLDG 95

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + E++ VSW +MI+   +  +   A + F MML +  EP+ FTL SV  +C+  S+    
Sbjct: 96  MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTG-SQGIHQ 154

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
              +QVH  +++   E + F+ ++L+ MYA+   + +A+ +F     RD+VS+ TI+S  
Sbjct: 155 HQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGY 214

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           ++     EA+   RQ+   G++ + V+ + +L A S L  +D GK++H   LR ++    
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           +   S L+DMY  C ++   RRVFD + ++ +  WNAM+ GYG++    E + LF  M +
Sbjct: 275 ALQNS-LIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD 333

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNALMDMYSRMG 435
              + P++ T+ +V+          +   +  H +K     L    Y    ++D+  R G
Sbjct: 334 --KVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHY--GCVIDLLGRSG 389

Query: 436 RIEISKTIFDDMEVRDTVS-WNTMI 459
           ++E +  +   M  + T + W +++
Sbjct: 390 QLEKALLLIQKMPFQPTRAIWGSLL 414



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 3/149 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S+   L    R     EA+  + ++    +Q +   F  +L A++G+  +  GKQ+H  +
Sbjct: 206 SYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLI 265

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       + + N+L++MY KCG  ++   +VFD + E+  VSWN+M+    R G    
Sbjct: 266 LRRELPF-FMALQNSLIDMYSKCGKLLYS-RRVFDNMPERSVVSWNAMLMGYGRHGMAYE 323

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            ++ FR M    V+P S TL++V L  S+
Sbjct: 324 VVQLFRFMC-DKVKPDSVTLLAVLLGYSH 351


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 349/595 (58%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           + + AC+  + L+  +++HA+ L +     ++F+ ++L+ +YC C  V   R+VFD +  
Sbjct: 56  TFITACAQSKNLEDARKVHAH-LASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRR 114

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  W ++I GY QN+  EEA+ L   M +     PN  T +S++ A            
Sbjct: 115 KDMVSWTSLIAGYAQNDMPEEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAHADSGIGRQ 173

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH  A+K     D YV +AL+DMY+R G ++++  +FD ++ ++ VSWN +I+G+   G 
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              ALM   EM        RN            +    T  +V      L AL +GK +H
Sbjct: 234 GETALMTFAEML-------RNGF----------EATHFTYSSVFSSIARLGALEQGKWVH 276

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++        G+ L+DMYAK G +  AR+VFD +  ++++TWN ++ A+  +G G+
Sbjct: 277 AHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGK 336

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + M   G     +  N+VTF+ +  ACSH G+V EG   F  MK+ Y +EP  D
Sbjct: 337 EAVSHFEEMRKSG-----IYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEID 390

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           H+  VV LLGRAG +  A   I  MP E   A  W +LL ACR+H+N ++G+ AA ++F 
Sbjct: 391 HFVTVVALLGRAGLLNFALVFIFKMPIE-PTAAVWGALLAACRMHKNAKVGQFAADHVFE 449

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+PD +   VLL NIY+S   WD A  VR+ MK  GV+KEP CSW+E  + +H F+A D 
Sbjct: 450 LDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDD 509

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H ++E+++     +S+++RKEGYVPD   VL  V+++E+E  L  HSEKLA+AF ++  
Sbjct: 510 THPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEM 569

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G TIR+ KN+R+C DCH A K+ISK+  REI++RD  RFHHF NG+CSC DYW
Sbjct: 570 PAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 199 LRLGRQVHGN--SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
           L   R+VH +  S R    + F+ N+L+ +Y K G V +A+ +F     +D+VSW ++++
Sbjct: 67  LEDARKVHAHLASSRFAG-DAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIA 125

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             +QND   EA+  L  M     KP+G + AS+L A         G++IHA A++ D   
Sbjct: 126 GYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCD-WH 184

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           ++ +VGSAL+DMY  C  ++    VFD +  K    WNA+I+G+ +    E ALM F +M
Sbjct: 185 EDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEM 244

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               G      T SSV  +  R  A    + +H H IK       +  N L+DMY++ G 
Sbjct: 245 LR-NGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGS 303

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  ++ +FD ++ +D V+WNTM+T +    Q+G    L +E  +  EE  ++ +Y     
Sbjct: 304 MIDARKVFDRVDDKDLVTWNTMLTAF---AQYG----LGKEAVSHFEEMRKSGIY----- 351

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                 N +T + +L  C     + +GK          L  ++     +V +  + G LN
Sbjct: 352 -----LNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLN 406

Query: 557 FARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           FA      MP+      W  ++ A  MH   +
Sbjct: 407 FALVFIFKMPIEPTAAVWGALLAACRMHKNAK 438



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 194/390 (49%), Gaps = 35/390 (8%)

Query: 10  LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
           LLP+  L  L  H  P T+  + P+P +                       A+L  +++ 
Sbjct: 7   LLPNYLL--LYRHTRPYTSTAANPVPAAS----------------------AVLRDLDLL 42

Query: 70  RS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
            + ++ P    +   + A A  ++L   +++HAH+    +      + N+L+++Y KCGS
Sbjct: 43  DAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFA-GDAFLDNSLIHLYCKCGS 101

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            + +  KVFD +  KD VSW S+IA   +    + A+     ML    +P+ FT  S+ L
Sbjct: 102 VL-EARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASL-L 159

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
             +      G  +GRQ+H  +++  +W  + ++ +AL+ MYA+ G +D A  +F   + +
Sbjct: 160 KAAGAHADSG--IGRQIHALAVKC-DWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSK 216

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           + VSWN ++S  ++      A+M   +M   G +    + +SV  + + L  L+ GK +H
Sbjct: 217 NGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVH 276

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A+ +++   +  +F G+ L+DMY     +   R+VFD + DK +  WN M+T + Q    
Sbjct: 277 AHMIKSRQKM-TAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLG 335

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           +EA+  F +M + +G++ N  T   ++ AC
Sbjct: 336 KEAVSHFEEMRK-SGIYLNQVTFLCILTAC 364



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 8/262 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+++   EAI     M +   +P+ F F ++LKA     D  +G+QIHA  
Sbjct: 119 SWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALA 178

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK  +    V V + L++MY +CG  M D+   VFD++  K+ VSWN++I+   R G  +
Sbjct: 179 VKCDWH-EDVYVGSALLDMYARCG--MMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMN 221
            AL  F  ML +  E + FT  SV    S+++R   L  G+ VH + ++  +  T F  N
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSV---FSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN 292

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+ MYAK G + DA+ +F   +D+DLV+WNT++++ +Q     EAV    +M   GI  
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 282 DGVSIASVLPACSHLEMLDTGK 303
           + V+   +L ACSH  ++  GK
Sbjct: 353 NQVTFLCILTACSHGGLVKEGK 374



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 22/248 (8%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P      + + AC +S+   D   +H H        D ++ N+L+ +Y + G +  ++
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD+M  +D VSW ++I GY       +A+ LL  M                    R K
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKG-----------------RFK 149

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN  T  ++L   GA +    G++IHA A++     DV VGSAL+DMYA+CG ++ A  V
Sbjct: 150 PNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAV 209

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +N ++WN +I  +   G+G+  L     M+  G      +    T+ ++F++ +
Sbjct: 210 FDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNG-----FEATHFTYSSVFSSIA 264

Query: 622 HSGMVSEG 629
             G + +G
Sbjct: 265 RLGALEQG 272


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/687 (36%), Positives = 383/687 (55%), Gaps = 71/687 (10%)

Query: 237 KTLFKS-FEDRDLVS-------WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           KT FKS  +D  LV        ++  +  L Q ++  EA+  L Q+     KP     ++
Sbjct: 20  KTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQID----KPSASVYST 75

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           ++ +C    +L  GK++H + ++    +   F+ + L++MY  C  +   +++FD + ++
Sbjct: 76  LIQSCIKSRLLQQGKKVHQH-IKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPER 134

Query: 349 KIALWN-------------------------------AMITGYGQNEYDEEALMLFIKME 377
            +  WN                               AMI+GY +++   EAL LF  M+
Sbjct: 135 DLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMK 194

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
                  N  T+SS + A          + IHG+ ++ GL  D  V +AL DMY + G I
Sbjct: 195 RSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSI 254

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           E ++ IFD M  RD V+W  MI  Y   G+                   R   +DL   +
Sbjct: 255 EEARHIFDKMVDRDIVTWTAMIDRYFQDGR-------------------RKEGFDLFADL 295

Query: 498 LRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           LR   +PN  T   VL  C   ++   GK++H Y  R          SALV MY+KCG +
Sbjct: 296 LRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNM 355

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A RVF   P  ++ +W  +I  Y  +G+  E +   + +V  G+     +P+ +TF+ 
Sbjct: 356 VSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT-----QPDHITFVG 410

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           + +AC+H+G+V +G+D F+ +K+ YG+  + DHYAC++DLL R+G+ ++A  +I+ M  +
Sbjct: 411 VLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMK 470

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            DK   W+SLLG CRIH N+++ + AA+ LF +EP+  + YV L+NIY++A +W +   +
Sbjct: 471 PDKF-LWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKI 529

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           RK M + GV K+PG SWI    ++H FL GD SH +S++++ FL  LS+RM++EG+VPDT
Sbjct: 530 RKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDT 589

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
           + VLH+V +E+KE  L  HSEKLA+AFGI++TP GT I+V KNLR C DCH A KFISKI
Sbjct: 590 NFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKI 649

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
            +R+II+RD  RFH F++G CSC DYW
Sbjct: 650 TNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 71/516 (13%)

Query: 47  ESLRSEARSNQFREA--ILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           E++    + N+ +EA  IL  I+      +P    +  ++++    + L  GK++H H+ 
Sbjct: 44  EAIHILCQQNRLKEALQILHQID------KPSASVYSTLIQSCIKSRLLQQGKKVHQHIK 97

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDM----------------WDVY-------------- 134
             G+ +  + + N L+ MY KC S M                W++               
Sbjct: 98  LSGF-VPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAK 156

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNL 193
            +FD++ E+D  SW +MI+   R  + + ALE FRMM  S N + + FT+ S   A + +
Sbjct: 157 SLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAV 216

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                LR+G+++HG  +R G + +  + +AL  MY K G +++A+ +F    DRD+V+W 
Sbjct: 217 P---CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWT 273

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++    Q+ +  E       +   GI+P+  + + VL AC++    + GK++H Y  R 
Sbjct: 274 AMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTR- 332

Query: 313 DILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            +  D  SF  SALV MY  C  +    RVF       +  W ++I GY QN   +EA+ 
Sbjct: 333 -VGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIR 391

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG----RDRYVQNAL 427
            F ++   +G  P+  T   V+ AC  +    DK   + H+IK   G     D Y    +
Sbjct: 392 YF-ELLVKSGTQPDHITFVGVLSACAHA-GLVDKGLDYFHSIKEQYGLTHTADHYA--CI 447

Query: 428 MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           +D+ +R G+ + ++ I   M ++ D   W +++ G   C  HG+  +  R  + + E + 
Sbjct: 448 IDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG---CRIHGNLKLAQRAAEALFEIEP 504

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            N                +TL  +    G  S +AK
Sbjct: 505 ENPA------------TYVTLANIYATAGMWSEVAK 528



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 142/261 (54%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDN-FAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +    R ++  EA+  +  M RSD    N F   + L A A +  L +GK+IH +
Sbjct: 169 SWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGY 228

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +++ G   S   V + L +MYGKCGS + +   +FD++ ++D V+W +MI    + G+  
Sbjct: 229 IMRTGLD-SDEVVWSALSDMYGKCGS-IEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRK 286

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
              + F  +L S + P+ FT   V  AC+N +  +   LG++VHG   RVG +  +F  +
Sbjct: 287 EGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEE---LGKKVHGYMTRVGFDPFSFAAS 343

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY+K G +  A+ +FK     DL SW ++++  +QN +  EA+ +   +   G +P
Sbjct: 344 ALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQP 403

Query: 282 DGVSIASVLPACSHLEMLDTG 302
           D ++   VL AC+H  ++D G
Sbjct: 404 DHITFVGVLSACAHAGLVDKG 424


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/821 (32%), Positives = 439/821 (53%), Gaps = 75/821 (9%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K GS + D  ++FDR+  +D  SWN++++   +  ++   LE F  M
Sbjct: 70  NVITHNIMMNGYAKQGS-LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128

Query: 172 LYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--------------- 215
             S +  P++FT   V  +C  L  R+   L  Q+ G   +   W               
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRE---LAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 216 -----------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
                              F  N+++A YAKL  +D A   F+   +RD+VSWN ++++L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           SQ+ +  EA+  + +M  +G++ D  +  S L AC+ L  L  GK++HA  +R+   ID 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID- 304

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME- 377
            +V SAL+++Y  C   +  +RVF+ + D+    W  +I G  Q E   +++ LF +M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E+  +  +   +++++  C           +H   +K G  R   V N+L+ +Y++ G +
Sbjct: 365 ELMAI--DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 422

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICG------QHGDAL----------MLLREMQNM 481
           + ++ +F  M  RD VSW +MIT Y+  G      +  D +          ML   +Q+ 
Sbjct: 423 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHG 482

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
            EE     +Y    +     P+ +T +T+  GC  + A   G +I  + ++  L  +V V
Sbjct: 483 AEEDGL-KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +A + MY+KCG ++ A+++FDL+  ++V++WN +I  Y  HG G++  +   +M+++G+
Sbjct: 542 ANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA 601

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                KP+ ++++A+ + CSHSG+V EG   F  M   +GI P  +H++C+VDLLGRAG 
Sbjct: 602 -----KPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGH 656

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           + +A  LI+ MP +   A  W +LL AC+IH N E+ E+AA+++F L+   +  Y+LL+ 
Sbjct: 657 LTEAKDLIDKMPMK-PTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IYS A   D +  VRK M++ G++K PG SW+E  +++H F A D SH Q   +   ++ 
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDE 775

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L E++   GYV             E       HSEKLA+AFGI++ P    I + KNLR+
Sbjct: 776 LMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRI 824

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K IS +  RE ++RD  RFHHFK+G+CSCGDYW
Sbjct: 825 CGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 224/470 (47%), Gaps = 61/470 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   +EM R  ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ L+ +Y KCGS   +  +VF+ + +++ VSW  +I    ++  +
Sbjct: 297 IR---SLPQIDPYVASALIELYAKCGS-FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 352

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C N   R  L LGRQ+H   L+ G     ++ 
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCFN---RMDLCLGRQLHSLCLKSGHNRAIVVS 409

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--- 277
           N+L+++YAK G + +A+ +F S  +RD+VSW +++++ SQ    ++A  F   MA R   
Sbjct: 410 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAI 469

Query: 278 -----------------GIK------------PDGVSIASVLPACSHLEMLDTGKEIHAY 308
                            G+K            PD V+  ++   C+ +     G +I  +
Sbjct: 470 TWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGH 529

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  ++++ S V +A + MY  C  +   +++FD ++ K +  WNAMITGY Q+   ++
Sbjct: 530 TVKAGLILNVS-VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGRDR 421
           A   F  M    G  P+  +  +V+  C  S     +EG          H I  GL    
Sbjct: 589 AAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLV--QEGKLYFDMMTRVHGISPGLEH-- 643

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
              + ++D+  R G +  +K + D M ++ T   W  +++    C  HG+
Sbjct: 644 --FSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA---CKIHGN 688



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/608 (24%), Positives = 264/608 (43%), Gaps = 107/608 (17%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  LS  D  RL R        + E N    N +M  YAK G + DA+ LF 
Sbjct: 44  TLLHAYLSCGALS--DARRLLRA------DIKEPNVITHNIMMNGYAKQGSLSDAEELFD 95

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q  +FL+ +     M   G   P+  +   V+ +C  L   +
Sbjct: 96  RMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI--------------- 345
              ++     + D   D   V +ALVDM+  C  V+   R+F  I               
Sbjct: 156 LAPQLLGLFWKFDFWGDPD-VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214

Query: 346 ----------------SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                           +++ +  WN MI    Q+    EAL L ++M    G+  ++TT 
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR-KGVRLDSTTY 273

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S + AC R  +    + +H   I+     D YV +AL+++Y++ G  + +K +F+ ++ 
Sbjct: 274 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R++VSW  +I G         ++ L  +M        R  +  +D+           L T
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVELFNQM--------RAELMAIDQ---------FALAT 376

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN------------- 556
           ++ GC     L  G+++H+  +++     +VV ++L+ +YAKCG L              
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 557 ------------------FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                              AR  FD M  RN ITWN ++ AY  HG  ++ L++   M++
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLG 657
           +     +V P+ VT++ LF  C+  G    G  +  + +K    +  S  + A  + +  
Sbjct: 497 Q----KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA--ITMYS 550

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL-----EPDV 712
           + G++ +A +L +++  +     +W++++     H    +G+ AA+    +     +PD 
Sbjct: 551 KCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGAKPDY 605

Query: 713 ASHYVLLS 720
            S+  +LS
Sbjct: 606 ISYVAVLS 613



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 42/369 (11%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q R   SW   +    +   F +++  + +M    +  D FA   ++       DL LG+
Sbjct: 332 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 391

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H+  +K G+   ++ V+N+L+++Y KCG D+ +   VF  ++E+D VSW SMI    +
Sbjct: 392 QLHSLCLKSGHN-RAIVVSNSLISLYAKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQ 449

Query: 158 FGK------------------WDLALEAF--------------RMMLYSNVEPSSFTLVS 185
            G                   W+  L A+               M+   +V P   T V+
Sbjct: 450 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           +   C+++      +LG Q+ G++++ G   N  + NA + MY+K GR+ +A+ LF    
Sbjct: 510 LFRGCADIGAN---KLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 566

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            +D+VSWN +++  SQ+    +A      M  +G KPD +S  +VL  CSH  ++  GK 
Sbjct: 567 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKL 626

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA-LWNAMITG---Y 360
                 R   +       S +VD+      +   + + D +  K  A +W A+++    +
Sbjct: 627 YFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 686

Query: 361 GQNEYDEEA 369
           G +E  E A
Sbjct: 687 GNDELAELA 695



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 139/366 (37%), Gaps = 91/366 (24%)

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL-------------------- 427
            ++  + +C    A      +HG  + +GL    ++QN L                    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 428 ------------MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
                       M+ Y++ G +  ++ +FD M  RD  SWNT+++GY    +  D L   
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M    +                  PN+ T   V+  CGAL       ++     +   
Sbjct: 126 VSMHRSGDS----------------LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDF 169

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRV-------------------------------FDL 564
             D  V +ALVDM+ +CG ++FA R+                               F+ 
Sbjct: 170 WGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFED 229

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  R+V++WN++I A    G  +E L L+  M  +G     V+ +  T+ +   AC+   
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-----VRLDSTTYTSSLTACARLF 284

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            +  G  L  K+       P  D Y  + +++L  + G  ++A ++ N +      + +W
Sbjct: 285 SLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSW 339

Query: 683 SSLLGA 688
           + L+G 
Sbjct: 340 TVLIGG 345



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLS 94
           G  TR   +W   L +  +     + +  Y  M ++ D+ PD   +  + +  A I    
Sbjct: 462 GMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANK 521

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           LG QI  H VK G  L+ V+VAN  + MY KCG  + +  K+FD +  KD VSWN+MI  
Sbjct: 522 LGDQIIGHTVKAGLILN-VSVANAAITMYSKCGR-ISEAQKLFDLLNGKDVVSWNAMITG 579

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             + G    A + F  ML    +P   + V+V   CS+
Sbjct: 580 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 388/673 (57%), Gaps = 41/673 (6%)

Query: 220 MNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           +N L+A    +G   V  A ++F      D+++WN+++ +   ++    A+    +M  R
Sbjct: 13  LNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72

Query: 278 GIK-PDGVSIASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNC 332
               PD  +  S+L  C+ L     GK +H     Y L +D+ I+ +     L++MY  C
Sbjct: 73  SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETT-----LLNMYAAC 127

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            +++  R +F+ +  +   +W +MI+GY +N    EAL+L+ KMEE  G  P+  TM+++
Sbjct: 128 GDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEE-DGFSPDEVTMATL 186

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           V AC   +       +H H  ++ +     + +AL++MY++ G ++ ++ +FD +  +D 
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDV 246

Query: 453 VSWNTMITGYTICGQHGDALMLLREM---QNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            +W+ +I GY    +  +AL L RE+    NM                   +PN +T++ 
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNM-------------------RPNEVTILA 287

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           V+  C  L  L  G+ +H Y  R      V + ++L+DM++KCG ++ A+R+FD M  ++
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +I+WN ++    +HG G+E L     M     +  +++P+E+TFI +  ACSH+G+V EG
Sbjct: 348 LISWNSMVNGLALHGLGREALAQFHLM-----QTTDLQPDEITFIGVLTACSHAGLVQEG 402

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             LFY+++  YG+    +HY C+VDLL RAG + +A + I +MP + D A  W S+LGAC
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGA-IWGSMLGAC 461

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           R++ N+E+GE AA+ L  LEP     Y+LLSNIY+  ++W++   VR+ M E G++K PG
Sbjct: 462 RVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPG 521

Query: 750 CSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           CS +   +  H FLAGD SH +  ++   L  + E+++  GYV DTS VL N+++ +KE 
Sbjct: 522 CSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEE 581

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            +  HSEKLA+ +G+L +  G  I + KNLRVC+DCH   K +SKI  R+I LRD  RFH
Sbjct: 582 SVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFH 641

Query: 870 HFKNGTCSCGDYW 882
           HFK+G+CSC DYW
Sbjct: 642 HFKDGSCSCRDYW 654



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 221/439 (50%), Gaps = 26/439 (5%)

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSN 192
           Y VF      D ++WNSM+           AL+++  ML  S   P  FT  S+   C+ 
Sbjct: 32  YSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCAL 91

Query: 193 LSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L      ++G+ +HG  ++ +   + +I   L+ MYA  G +  A+ LF+    R+ V W
Sbjct: 92  LLE---FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW 148

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++S   +N    EA++  ++M   G  PD V++A+++ AC+ L+ L  G ++H++   
Sbjct: 149 TSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
            D+ I  + +GSALV+MY  C +++  R+VFD +SDK +  W+A+I GY +N    EAL 
Sbjct: 209 MDMKI-CAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF ++   + + PN  T+ +V+ AC +         +H +  +   G    + N+L+DM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           S+ G I+ +K IFD M  +D +SWN+M+ G  + G   +AL     MQ  +         
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTD--------- 378

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMY 549
                    +P+ IT + VL  C     + +GK++  Y I  +    +       +VD+ 
Sbjct: 379 --------LQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLL 429

Query: 550 AKCGCLNFARRVFDLMPVR 568
            + G L  AR    +MP++
Sbjct: 430 CRAGLLAEAREFIRVMPLQ 448



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 220/431 (51%), Gaps = 32/431 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   LR+   SN  R A+ SY EM  RS   PD F FP++LK  A + +  +GK +H  
Sbjct: 45  TWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ 104

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VVKY    S + +  TL+NMY  CG D+     +F+R+  +++V W SMI+   +    +
Sbjct: 105 VVKYMLH-SDLYIETTLLNMYAACG-DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMN 221
            AL  ++ M      P   T+ ++  AC+ L     G++L   +    +++      + +
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC---AVLGS 219

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIK 280
           AL+ MYAK G +  A+ +F    D+D+ +W+ ++    +N++  EA+   R++A    ++
Sbjct: 220 ALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYCNCREVE 336
           P+ V+I +V+ AC+ L  L+TG+ +H Y  R    + + ++NS     L+DM+  C +++
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNS-----LIDMFSKCGDID 334

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +R+FD +S K +  WN+M+ G   +    EAL  F  M +   L P+  T   V+ AC
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLM-QTTDLQPDEITFIGVLTAC 393

Query: 397 VRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             +       + F + E ++G  +K     + Y    ++D+  R G +  ++     M +
Sbjct: 394 SHAGLVQEGKKLFYEIEALYGVRLK----SEHY--GCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 450 R-DTVSWNTMI 459
           + D   W +M+
Sbjct: 448 QPDGAIWGSML 458



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 180/351 (51%), Gaps = 25/351 (7%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R K  W   +    +++   EA+L Y +M      PD      ++ A A ++DL +G ++
Sbjct: 143 RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKL 202

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H+H+ +    + +V + + LVNMY KCG D+    +VFD++++KD  +W+++I    +  
Sbjct: 203 HSHIREMDMKICAV-LGSALVNMYAKCG-DLKTARQVFDQLSDKDVYAWSALIFGYVKNN 260

Query: 160 KWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           +   AL+ FR +   SN+ P+  T+++V  AC+ L     L  GR VH    R  + ++ 
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLG---DLETGRWVHDYITRTQKGHSV 317

Query: 219 IM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + N+L+ M++K G +D AK +F S   +DL+SWN++V+ L+ +    EA+     M   
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTT 377

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGK----EIHA-YALRNDILIDNSFVGSALVDMYCNC 332
            ++PD ++   VL ACSH  ++  GK    EI A Y +R    + +   G  +VD+ C  
Sbjct: 378 DLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVR----LKSEHYG-CMVDLLCRA 432

Query: 333 REVECGR---RVFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
             +   R   RV     D   A+W +M+     Y   E  EEA    +++E
Sbjct: 433 GLLAEAREFIRVMPLQPDG--AIWGSMLGACRVYNNLELGEEAARCLLELE 481


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 274/797 (34%), Positives = 442/797 (55%), Gaps = 52/797 (6%)

Query: 3   SSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKES---------------WIE 47
           +S + LTLL S  L +   H P A+T   L    SQ  C +S               W  
Sbjct: 12  TSLRPLTLLHSHLLVTGLHHDPQAST--KLIESYSQIGCLQSSKLVFETFQNPDSFMWAV 69

Query: 48  SLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
            ++    SN   EAI  Y +M    I   +F F +VL+A AG  +L +G+++H  ++KYG
Sbjct: 70  LIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYG 129

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
             +  V V  +L+ MYG  G  + +  KVFD +T +D VSW+S+I+     G+    LE 
Sbjct: 130 LDVDHV-VETSLLGMYGDLGC-LSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEM 187

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           FR+++  +VE  S T++S+A AC  L     LRL + VHG  +R   E    + +AL+ M
Sbjct: 188 FRLLVSQDVELDSVTMLSIAGACGELGF---LRLAKSVHGCIIRQRIETRGPLNDALVLM 244

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y++      A+ +F +  +R + SW  ++S  +++  F +A+    +M    + P+ V+I
Sbjct: 245 YSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTI 304

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            +VL +C+   +L  GK +H YA+++ I +D+  +G AL++ Y    ++    +V   I 
Sbjct: 305 MAVLSSCAGFNLLREGKSVHCYAVKH-IDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIG 363

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + I  WN +I+ Y      +EAL +F++M+   G  P++ ++SS + AC          
Sbjct: 364 KRNIISWNMLISVYASQGLFKEALGIFVQMQR-QGQIPDSFSLSSSISACANVGLLWLGH 422

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IHG+AIK  +  D +VQN+L+DMYS+ G ++++  IFD ++ +  V+WN+MI G++  G
Sbjct: 423 QIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIG 481

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +A+ L  +M          N  D++E         +T +T +  C  +  L KGK +
Sbjct: 482 NSLEAIRLFDQMYL--------NCLDMNE---------VTFLTAIQACSHMGHLEKGKWL 524

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H   I   +  D+ + +AL+DMYAKCG L  A RVFD M  R+V++W+ +I   GMHG+ 
Sbjct: 525 HHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDI 584

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
              + L   M+       E+KPN++TF+ + +ACSHSG V EG   F  MK+ + +EP+ 
Sbjct: 585 DAAISLFAEMIQR-----EMKPNDITFMNILSACSHSGYVEEGKFYFNSMKN-FEVEPNL 638

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMP-PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
           +H+AC+VDLL RAG +++AY++IN MP P   +A  W +LL  CRIHQ +++     ++L
Sbjct: 639 EHFACMVDLLSRAGDLDEAYRIINSMPFPA--EASIWGALLNGCRIHQRMDMIRNIERDL 696

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             +  D   +Y LLSNIY+    WD +  VR  MK +G++K PG S IE   ++++F AG
Sbjct: 697 LDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAG 756

Query: 766 DGSHQQSEQLHGFLENL 782
           D SH Q ++++ FLEN 
Sbjct: 757 DVSHWQVKEINTFLENF 773


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/611 (39%), Positives = 363/611 (59%), Gaps = 36/611 (5%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYCNCRE 334
           ++PD      +L  C+ L  L  GK +H + +    RND++I NS     ++ MY  C  
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNS-----ILFMYAKCGS 141

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA---LMLFIKMEEVAGLWPNATTMSS 391
           +E  R+VFD +  K +  W +MITGY Q+ Y   A   L+LF++M    GL PN   +SS
Sbjct: 142 LEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR-DGLRPNEFALSS 200

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           +V  C    +  D + IHG   K G   + +V ++L+DMY+R G +  S+ +FD++E ++
Sbjct: 201 LVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKN 260

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSWN +I+G+   G+  +AL L  +MQ       R                  T   +L
Sbjct: 261 EVSWNALISGFARKGEGEEALGLFVKMQ-------REGF----------GATEFTYSALL 303

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
                  +L +GK +HA+ +++       VG+ L+ MYAK G +  A++VFD +   +V+
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           + N +++ Y  HG G+E +EL + M+       E++PN++TF+++  ACSH+G++ EG+ 
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMML----WVEIEPNDITFLSVLTACSHAGLLDEGLY 419

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  MK  YG+EP   HY  VVDL GRAG ++ A   I  MP E   A  W +LLGA ++
Sbjct: 420 YFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIE-PNATIWGALLGASKM 477

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N E+G  AAQ +  L+P     + LLSNIY+SA  W     VRK+MK+ G++KEP CS
Sbjct: 478 HKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACS 537

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W+E  + +H F A D SH Q  +++   ENL++++++ GYVPDTS V   V+++EKE  L
Sbjct: 538 WVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNL 597

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLA+AF +LNT PG+ IR+ KN+RVC DCH A K++S +  REII+RD  RFHHF
Sbjct: 598 QYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHF 657

Query: 872 KNGTCSCGDYW 882
           ++G+CSC DYW
Sbjct: 658 RDGSCSCRDYW 668



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 198/399 (49%), Gaps = 15/399 (3%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           +    ++PD   +  +LK    +  L  GK +H H++   +  + + + N+++ MY KCG
Sbjct: 82  INNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFR-NDLVIKNSILFMYAKCG 140

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFG---KWDLALEAFRMMLYSNVEPSSFTLV 184
           S +    +VFD +  KD V+W SMI    + G       AL  F  M+   + P+ F L 
Sbjct: 141 S-LEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
           S+   C  L        G+Q+HG   + G + N F+ ++L+ MYA+ G + +++ +F   
Sbjct: 200 SLVKCCGFLG---SCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL 256

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           E ++ VSWN ++S  ++  +  EA+    +M   G      + +++L + S    L+ GK
Sbjct: 257 ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGK 316

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
            +HA+ +++   +   +VG+ L+ MY     +   ++VFD +    +   N+M+ GY Q+
Sbjct: 317 WLHAHMMKSGKKL-VGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH 375

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDR 421
              +EA+ LF +M     + PN  T  SV+ AC  S A    EG++   +  K GL    
Sbjct: 376 GLGKEAVELFEEMMLWVEIEPNDITFLSVLTAC--SHAGLLDEGLYYFELMKKYGLEPKL 433

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
                ++D++ R G ++ +K+  ++M +    + W  ++
Sbjct: 434 SHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 180/359 (50%), Gaps = 17/359 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S I     +  ++    A++ ++EM R  ++P+ FA  +++K    +     GKQIH   
Sbjct: 162 SMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCC 221

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            KYG+   +V V ++LV+MY +CG ++ +   VFD +  K++VSWN++I+   R G+ + 
Sbjct: 222 WKYGFQ-ENVFVGSSLVDMYARCG-ELRESRLVFDELESKNEVSWNALISGFARKGEGEE 279

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M       + FT    AL CS+ S    L  G+ +H + ++ G +   ++ N 
Sbjct: 280 ALGLFVKMQREGFGATEFTY--SALLCSS-STTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL-RGIKP 281
           L+ MYAK G + DAK +F      D+VS N+++   +Q+    EAV    +M L   I+P
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEP 396

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRR 340
           + ++  SVL ACSH  +LD G  ++ + L     ++      + +VD++     ++  + 
Sbjct: 397 NDITFLSVLTACSHAGLLDEG--LYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAK- 453

Query: 341 VFDFISDKKI----ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              FI +  I     +W A++     ++  E       K+ E+   +P A T+ S + A
Sbjct: 454 --SFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA 510



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           +++ + SW   +   AR  +  EA+  +++M R       F + A+L + +    L  GK
Sbjct: 257 ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGK 316

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +HAH++K G  L    V NTL++MY K G ++ D  KVFDR+ + D VS NSM+    +
Sbjct: 317 WLHAHMMKSGKKLVGY-VGNTLLHMYAKSG-NICDAKKVFDRLVKVDVVSCNSMLIGYAQ 374

Query: 158 FGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGR--QVHGNSLRVG 213
            G    A+E F  MML+  +EP+  T +SV  ACS+    D GL      + +G   ++ 
Sbjct: 375 HGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLS 434

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFK 241
            + T +      ++ + G +D AK+  +
Sbjct: 435 HYTTVV-----DLFGRAGLLDQAKSFIE 457


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 347/596 (58%), Gaps = 24/596 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            SVL +C     L TG+++H   L + +  D + + + LVD+Y  C  V   RR+FD + 
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPD-TVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + + LWN +I  Y ++   E A+ L+  M +  G+ P+  T    + AC          
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDY-GVEPDNFTYPLALKACAALLDLETGR 183

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   +    G D +V   L+DMY++ G ++ ++ +FD + VRD+V WN+MI  Y   G
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           +  +AL L R+M         N V           P   TL++ +      +AL +G+E+
Sbjct: 244 RPMEALSLCRDMAA-------NGV----------GPTIATLVSTISAAADAAALPRGREL 286

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H +  R        + ++LVDMYAK G +  AR +F+ +  R +++WN +I  YGMHG  
Sbjct: 287 HGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHF 346

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            E L+L   M  E     +V P+ +TF+ + +AC+H GMV E  + F  M D Y I+P+ 
Sbjct: 347 DEALKLFNKMRVEA----QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTV 402

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
            H+ C+VD+LG AG+ E+AY LI  MP + D +G W +LL  C+IH+NVE+GE+A Q L 
Sbjct: 403 QHFTCLVDVLGHAGRFEEAYDLIKGMPMQPD-SGIWGALLNGCKIHKNVELGELALQKLI 461

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEP+ A +YVLLSNIY+ +  W+KA  VRK M   G++K  GCSWIE   + H FL GD
Sbjct: 462 ELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGD 521

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH +S +++  LE L   M   GY+PDT  V H+V ++EK  ++  HSE+LAIAFG+++
Sbjct: 522 ASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLIS 581

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TP GT + V KNLRVC DCH   K IS+I  REII+RDV R+HHF NG CSC DYW
Sbjct: 582 TPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 214/432 (49%), Gaps = 34/432 (7%)

Query: 75  PDNFA-FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           P+++  + +VL++    + L  G+Q+H  ++  G G  +V +A  LV++Y  CG  +   
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTV-LATKLVDLYAACGL-VGHA 116

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            ++FD + +++   WN +I    R G  ++A++ +R M+   VEP +FT      AC+ L
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176

Query: 194 SRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
              +    GR+VH   L    W  + F+   L+ MYAK G VDDA+ +F     RD V W
Sbjct: 177 LDLE---TGREVHERVLGT-HWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVW 232

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++++  QN + +EA+   R MA  G+ P   ++ S + A +    L  G+E+H +  R
Sbjct: 233 NSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWR 292

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
                 +  + ++LVDMY     V+  R +F+ +  +++  WNAMI GYG + + +EAL 
Sbjct: 293 RGFDRQDK-LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALK 351

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-----LGLGRDRY---- 422
           LF KM   A + P+  T   V+ AC            HG  +K      GL  D Y    
Sbjct: 352 LFNKMRVEAQVTPDNITFVGVLSACN-----------HGGMVKEAKEFFGLMVDVYSIKP 400

Query: 423 -VQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
            VQ+   L+D+    GR E +  +   M ++ D+  W  ++ G  I        + L+++
Sbjct: 401 TVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKL 460

Query: 479 QNMEEEKNRNNV 490
             +E E   N V
Sbjct: 461 IELEPEDAGNYV 472



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 165/344 (47%), Gaps = 21/344 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ AR      AI  Y  M    ++PDNF +P  LKA A + DL  G+++H  V+
Sbjct: 131 WNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVL 190

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
              +G   + V   LV+MY KCG  + D   VFDRI  +D V WNSMIA   + G+   A
Sbjct: 191 GTHWG-EDMFVCAGLVDMYAKCGC-VDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEA 248

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L   R M  + V P+  TLVS     S  +    L  GR++HG   R G +    +  +L
Sbjct: 249 LSLCRDMAANGVGPTIATLVS---TISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSL 305

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPD 282
           + MYAK G V  A+ LF+    R+LVSWN ++     +  F EA+    +M +   + PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPD 365

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYCNCREVECGRR 340
            ++   VL AC+H  M+   KE   + L  D+      V   + LVD+  +    E    
Sbjct: 366 NITFVGVLSACNHGGMVKEAKEF--FGLMVDVYSIKPTVQHFTCLVDVLGHAGRFE---E 420

Query: 341 VFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
            +D I    +     +W A++ G   +   E  E AL   I++E
Sbjct: 421 AYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/669 (38%), Positives = 372/669 (55%), Gaps = 63/669 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N+ +   LM  YA L  V  A+ +F    +R+++  N ++ S   N  + E V     M 
Sbjct: 73  NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              ++PD  +   VL ACS    +  G++IH  A +   L    FVG+ LV MY  C  +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFL 191

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R V D +S + +  WN+++ GY QN+  ++AL +  +ME V  +  +A TM+S++PA
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK-ISHDAGTMASLLPA 250

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
              +      E +             YV+    DM+ +MG+             +  VSW
Sbjct: 251 VSNTTT----ENV------------MYVK----DMFFKMGK-------------KSLVSW 277

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MI  Y       +A+ L   M+    E                 P+++++ +VLP CG
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFE-----------------PDAVSITSVLPACG 320

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
             SAL+ GK+IH Y  R  L  ++++ +AL+DMYAKCGCL  AR VF+ M  R+V++W  
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I AYG  G G + + L   +   G     + P+ + F+   AACSH+G++ EG   F  
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSG-----LVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M D Y I P  +H AC+VDLLGRAGKV++AY+ I  M  E ++   W +LLGACR+H + 
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER-VWGALLGACRVHSDT 494

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           +IG +AA  LF L P+ + +YVLLSNIY+ A  W++  ++R  MK  G++K PG S +E 
Sbjct: 495 DIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
              IH FL GD SH QS++++  L+ L ++M++ GYVPD+   LH+V EE+KET L  HS
Sbjct: 555 NRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHS 614

Query: 816 EKLAIAFGILNTP-----PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           EKLAI F ++NT         TIR+ KNLR+C DCH A K IS+I SREII+RD  RFH 
Sbjct: 615 EKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 674

Query: 871 FKNGTCSCG 879
           F+ G CSC 
Sbjct: 675 FRFGVCSCA 683



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 39/348 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +RS   +  + E +  +  M   +++PD++ FP VLKA +    + +G++IH    K G 
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S++ V N LV+MYGKCG  + +   V D ++ +D VSWNS++    +  ++D ALE  
Sbjct: 172 S-STLFVGNGLVSMYGKCGF-LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M    +   + T+ S+  A SN +             N + V +           M+ 
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNTTTE-----------NVMYVKD-----------MFF 267

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K+G+             + LVSWN ++    +N   +EAV    +M   G +PD VSI S
Sbjct: 268 KMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VLPAC     L  GK+IH Y  R   LI N  + +AL+DMY  C  +E  R VF+ +  +
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  W AMI+ YG +    +A+ LF K+++ +GL P++    + + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAAC 420



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 8/245 (3%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA L   EM+R D+   N       +       L + +++ +  + +  G    T+A+ L
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG----TMASLL 248

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
             +      ++  V  +F ++ +K  VSWN MI    +      A+E +  M     EP 
Sbjct: 249 PAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
           + ++ SV  AC + S    L LG+++HG   R     N  + NAL+ MYAK G ++ A+ 
Sbjct: 309 AVSITSVLPACGDTS---ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F++ + RD+VSW  ++S+   + +  +AV    ++   G+ PD ++  + L ACSH  +
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425

Query: 299 LDTGK 303
           L+ G+
Sbjct: 426 LEEGR 430


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/668 (37%), Positives = 378/668 (56%), Gaps = 61/668 (9%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F  NA+++ Y+K G V+D + +F      D VS+NT+++  S N    +A+ F  +M 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +    +  SVL ACS L  +  GK+IH   +    L ++ FV +AL +MY  C  +
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATS-LGESVFVWNALTNMYAKCGAL 206

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  R +FD + +K +  WN+MI+GY QN   E    LF +M+  +GL P+  T+S+++ A
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQS-SGLMPDQVTISNILSA 265

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                                              Y + G I+ +   F +++ +D V W
Sbjct: 266 -----------------------------------YFQCGYIDEACKTFREIKEKDKVCW 290

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
            TM+ G    G+  DAL+L REM              L E V   +P++ T+ +V+  C 
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREM--------------LLENV---RPDNFTISSVVSSCA 333

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L++L +G+ +H  A+   +  D++V SALVDMY+KCG    A  VF  M  RNVI+WN 
Sbjct: 334 RLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNS 393

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+ Y  +G+  E L L + M+ E      +KP+ +TF+ + +AC H+G+V  G   FY 
Sbjct: 394 MILGYAQNGKDLEALALYEEMLHEN-----LKPDNITFVGVLSACMHAGLVERGQGYFYS 448

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           +   +G+ P+ DHY+C+++LLGRAG ++ A  LI  M  E      WS+LL  CRI+ +V
Sbjct: 449 ISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFE-PNCLIWSTLLSVCRINCDV 507

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
             GE+AA++LF L+P  A  Y++LSNIY++   W     VR  MK   ++K    SWIE 
Sbjct: 508 NNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEI 567

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
            +++HKF+A D +H ++EQ++  L  L +++++ G+ PDT+ VLH+V EEEK   +C HS
Sbjct: 568 DNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHS 627

Query: 816 EKLAIAFGILNTPPGTT-IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           EKLA+AF ++  P G T IR+ KN+RVC DCH   KF+SKI  R IILRD+ RFHHF  G
Sbjct: 628 EKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEG 687

Query: 875 TCSCGDYW 882
            CSC D W
Sbjct: 688 RCSCKDSW 695



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 249/541 (46%), Gaps = 71/541 (13%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHA 101
           ES+   L    RSN   +A      M     QP D F    +L   A   +LS  + +  
Sbjct: 23  ESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFD 82

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            + +       V   N +++ Y K G ++ D+  VFD+++  D VS+N++IA     G  
Sbjct: 83  KMSR-----RDVFSWNAMLSAYSKSG-NVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCS 136

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN--SLRVGEWNTFI 219
             ALE F  M     E + +T VSV  ACS L     ++ G+Q+HG   +  +GE + F+
Sbjct: 137 SQALEFFVRMQEEGFESTDYTHVSVLHACSQLL---DIKRGKQIHGRIVATSLGE-SVFV 192

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NAL  MYAK G +D A+ LF    ++++VSWN+++S   QN +         +M   G+
Sbjct: 193 WNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGL 252

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD V+I+++L A                                    Y  C  ++   
Sbjct: 253 MPDQVTISNILSA------------------------------------YFQCGYIDEAC 276

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           + F  I +K    W  M+ G  QN  +E+AL+LF +M  +  + P+  T+SSVV +C R 
Sbjct: 277 KTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREM-LLENVRPDNFTISSVVSSCARL 335

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            +    + +HG A+  G+  D  V +AL+DMYS+ G    +  +F  M  R+ +SWN+MI
Sbjct: 336 ASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMI 395

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY   G+  +AL L  EM              L E +   KP++IT + VL  C     
Sbjct: 396 LGYAQNGKDLEALALYEEM--------------LHENL---KPDNITFVGVLSACMHAGL 438

Query: 520 LAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           + +G+  + Y+I  +   +      S ++++  + G ++ A  +   M    N + W+ +
Sbjct: 439 VERGQG-YFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTL 497

Query: 577 I 577
           +
Sbjct: 498 L 498



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 14/221 (6%)

Query: 42  KESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           K  W   +   A++ +  +A+L + EM   +++PDNF   +V+ + A +  L  G+ +H 
Sbjct: 287 KVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHG 346

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
             V +G     + V++ LV+MY KCG +  D + VF R+  ++ +SWNSMI    + GK 
Sbjct: 347 KAVIFGVD-HDLLVSSALVDMYSKCG-ETADAWIVFKRMLTRNVISWNSMILGYAQNGKD 404

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSN---LSRRDGLRLG-RQVHGNSLRVGEWNT 217
             AL  +  ML+ N++P + T V V  AC +   + R  G      ++HG +     ++ 
Sbjct: 405 LEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSC 464

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVS 256
            I      +  + G +D A  L KS  FE   L+ W+T++S
Sbjct: 465 MI-----NLLGRAGYMDKAVDLIKSMTFEPNCLI-WSTLLS 499


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/632 (39%), Positives = 352/632 (55%), Gaps = 29/632 (4%)

Query: 273 QMALRGIKPDGVSIASVL---PACSHLEMLDTGK---EIHAYALRNDILIDNSFVGSALV 326
           Q  L+   P  +    +L   P   HL    T K   +IHA  +   I  DN FV S ++
Sbjct: 16  QSNLQNQNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDN-FVASRIL 74

Query: 327 DMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
                     +   R +F  I    I + N +I  Y  +    +A++ + +M E + ++P
Sbjct: 75  SFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFP 134

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +  T   ++ AC    +    E IH H  KLG   +  V N L+ MY+  G IE +  +F
Sbjct: 135 DVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVF 194

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME------------EEKNRNNVYD 492
           D     D  SWN MI GY  CG    A  +   M + +            +E        
Sbjct: 195 DRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLG 254

Query: 493 LDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           L + ++  K  PN   L+  L  C  L A+ +G+ I  Y  R  +   V +G+AL+DMY+
Sbjct: 255 LFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYS 314

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG +  A  VF  M  +NV+ W+ +I    ++G+G++ L L   M  +G     VKPNE
Sbjct: 315 KCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQG-----VKPNE 369

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTFI +  ACSHS +V EG   F+ M   YG++P+  H+ C+VDL GRAG ++ A  +I 
Sbjct: 370 VTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIK 429

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP + + A  W +LL ACRIH + E+GE   + L  L+P+    YVLLSNIY++   WD
Sbjct: 430 SMPFKPNSA-IWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWD 488

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           +  ++R+ M+E  V K PGCS+I+ GD IH+F+AGD SH Q E ++  L  +S+ ++  G
Sbjct: 489 RVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAG 548

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y PDT  VL +++EEEKET LC HSEKLAIAFG++ T PGTTIR+ KNLRVC DCH ATK
Sbjct: 549 YKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATK 608

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ISKI +REII+RD  RFHHF++G+CSC D+W
Sbjct: 609 LISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 187/386 (48%), Gaps = 42/386 (10%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG 107
           +R+ A S    +A++ Y EMT S +  PD   FP +LKA + I  L LG+ IH+HV K G
Sbjct: 107 IRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLG 166

Query: 108 YGLSSVTVANTLVNMYGKCG----------------SDMWDVY--------------KVF 137
           +  S V+V+N LV MY  CG                   W++               ++F
Sbjct: 167 WS-SEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMF 225

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRR 196
           + + ++D VSW+ MI    +  ++   L  F+ M+   +EP+   LV+   AC++L +  
Sbjct: 226 EAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAME 285

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            G  + R +   ++R+      +  AL+ MY+K G V+ A  +F   +++++++W+ +++
Sbjct: 286 QGQWIERYMERKNVRL---TVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMIN 342

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
            L+ N +  +A+    QM ++G+KP+ V+   +L ACSH +++D G            L 
Sbjct: 343 GLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLK 402

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDK-KIALWNAMITG---YGQNEYDEEALML 372
            N+     +VD+Y     ++  + V   +  K   A+W A++     +G  E  E+    
Sbjct: 403 PNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKR 462

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVR 398
            ++++   G       +S++  AC R
Sbjct: 463 LLELDPNHG--GRYVLLSNIYAACGR 486



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 209/483 (43%), Gaps = 77/483 (15%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKL---GRVDDAKTLFKSFEDRDL 248
           +LS    L+   Q+H  ++  G ++   + + +  +A L   G +  A+ LF      D+
Sbjct: 41  HLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDI 100

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLDTGKEIHA 307
              NT++ + + +   ++AV+F  +M    +  PD  +   +L ACS +  L  G+ IH+
Sbjct: 101 FIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHS 160

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVE--------------------------CG--- 338
           +  +     + S V + LV MY +C  +E                          CG   
Sbjct: 161 HVFKLGWSSEVS-VSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFK 219

Query: 339 --RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVP 394
             RR+F+ + D+ +  W+ MI GY Q    +E L LF  M  E++    PN + + + + 
Sbjct: 220 SARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE---PNESVLVNALS 276

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC    A    + I  +  +  +     +  AL+DMYS+ G +E +  +F  M+ ++ ++
Sbjct: 277 ACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLA 336

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W+ MI G  I GQ  DAL L  +M+                 +   KPN +T + +L  C
Sbjct: 337 WSAMINGLAINGQGKDALNLFSQME-----------------MQGVKPNEVTFIGILNAC 379

Query: 515 GALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
                + +G    H+      L  +      +VD+Y + G L+ A+ V   MP + N   
Sbjct: 380 SHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAI 439

Query: 573 WNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNE----VTFIALFAACSHSGM 625
           W  ++ A  +HG+   G++V          G R  E+ PN     V    ++AAC     
Sbjct: 440 WGALLNACRIHGDTELGEQV----------GKRLLELDPNHGGRYVLLSNIYAACGRWDR 489

Query: 626 VSE 628
           V+E
Sbjct: 490 VAE 492



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 5/200 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    + ++F+E +  + +M    I+P+       L A A +  +  G+ I  ++
Sbjct: 235 SWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYM 294

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +    L +V +   L++MY KCGS +    +VF ++ EK+ ++W++MI  L   G+   
Sbjct: 295 ERKNVRL-TVRLGTALIDMYSKCGS-VERALEVFHKMKEKNVLAWSAMINGLAINGQGKD 352

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNA 222
           AL  F  M    V+P+  T + +  ACS+    D G      +   S+   + N      
Sbjct: 353 ALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSM--TSIYGLKPNAHHHCC 410

Query: 223 LMAMYAKLGRVDDAKTLFKS 242
           ++ +Y + G +D A+T+ KS
Sbjct: 411 MVDLYGRAGMLDQAQTVIKS 430


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/638 (37%), Positives = 352/638 (55%), Gaps = 90/638 (14%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L +C HL  L    +IHA  + +     +S   + L+++Y    + +  R VFD   + 
Sbjct: 58  LLSSCKHLNPL---LQIHAQIIVSGFKHHHSI--THLINLYSLFHKCDLARSVFDSTPNP 112

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
              LWN+MI  Y +++   EAL ++  M E                              
Sbjct: 113 SRILWNSMIRAYTRSKQYNEALEMYYCMVE------------------------------ 142

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN------------ 456
                K GL RD ++   L+DMYS+MG ++ ++ +FD M  RD V+WN            
Sbjct: 143 -----KGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 197

Query: 457 -------------------TMITGYTICGQHGDALMLLREMQ------------NMEEEK 485
                              TM+ GY   G   + L L  +M+             M+   
Sbjct: 198 YVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGH 257

Query: 486 NRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
            +  +    +  L    PNS+T ++VLP    L+A  +G   HA  I+    ++ +VG++
Sbjct: 258 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 317

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           L+DMYAKCG L+++ ++F+ M  ++ ++WN ++  Y +HG G   + L   M     +  
Sbjct: 318 LIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM-----QES 372

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
           +V+ + V+F+++ +AC H+G+V EG  +F+ M D Y I+P  +HYAC+VDLLGRAG  ++
Sbjct: 373 QVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDE 432

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
               I +MP E D AG W +LLG+CR+H NV++GE+A  +L  LEP   +H+V+LS+IY+
Sbjct: 433 TLGFIKVMPVEPD-AGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA 491

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
            +  W  A   R KM ++G++K PGCSW+E  +++H F  GD SH Q E +H     L E
Sbjct: 492 QSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLE 551

Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
           +M K GYVPD SCVL NV EE+KE  L  HSE+LAI F +LNTPPG+TI++ KNLRVC D
Sbjct: 552 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 611

Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CH  TKFISKI +R II+RD  RFHHF++G CSC DYW
Sbjct: 612 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 207/499 (41%), Gaps = 69/499 (13%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +P +L +   +  L    QIHA ++  G+    S+T    L +++ KC  D+     VFD
Sbjct: 55  YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKC--DL--ARSVFD 107

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF---TLVSVALACSNLSR 195
                 ++ WNSMI    R  +++ ALE    M Y  VE         +   L     S+
Sbjct: 108 STPNPSRILWNSMIRAYTRSKQYNEALE----MYYCMVEKGGLERDVFIGAGLV-DMYSK 162

Query: 196 RDGLRLGRQVHGNSLR--VGEWNTFIMN--------------------------ALMAMY 227
              L+  R+V     +  V  WN  I                             +MA Y
Sbjct: 163 MGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGY 222

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           A  G   +   LF   +  + V+WN I+++  QN    EA+    QM L    P+ V+  
Sbjct: 223 AHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 281

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           SVLPA ++L     G   HA  ++   L  N+ VG++L+DMY  C +++   ++F+ +  
Sbjct: 282 SVLPAAAYLAAFREGMAFHACIIQMGFL-SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 340

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K    WNAM++GY  + + + A+ LF  M+E + +  ++ +  SV+ AC  +    +   
Sbjct: 341 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-SQVQIDSVSFVSVLSACRHAGLVEEGRK 399

Query: 408 I-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTIC 465
           I H  + K  +  D      ++D+  R G  + +      M V  D   W  ++     C
Sbjct: 400 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS---C 456

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDL-------------DETVLRPKPNSITLMTVLP 512
             H +  +    + ++ + + RN  + +             D    R K N + L    P
Sbjct: 457 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT-P 515

Query: 513 GCGALSALAKGKEIHAYAI 531
           GC   S +    ++HA+ +
Sbjct: 516 GC---SWVELKNKVHAFRV 531



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 41/293 (13%)

Query: 45  WIESLRSEARSNQFREAI-LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +R+  RS Q+ EA+ + Y  + +  ++ D F    ++   + + DL   +++   +
Sbjct: 117 WNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 176

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG---- 159
            K       V   N ++    +   D +   +VFD++ ++D VSW +M+A     G    
Sbjct: 177 PK-----RDVVAWNAMIAGLSQ-SEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 230

Query: 160 -------------KWDL-------------ALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                         W++             A+ +F  M   N  P+S T VSV  A + L
Sbjct: 231 VLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 290

Query: 194 SRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +     R G   H   +++G   NT + N+L+ MYAK G++D ++ LF   + +D VSWN
Sbjct: 291 A---AFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWN 347

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            ++S  + +     A+     M    ++ D VS  SVL AC H  +++ G++I
Sbjct: 348 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 400


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/733 (33%), Positives = 409/733 (55%), Gaps = 38/733 (5%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           F + +L+Y  M  +D  PD   FP+++KA   +   S G   H  V+  GY  S   +A 
Sbjct: 29  FCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYS-SDSYIAT 87

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           +L+N Y K G +     KVFD + +++ V W +MI    R G+ D+A   + +M    ++
Sbjct: 88  SLINFYSKFGHNQ-SARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQ 146

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA 236
           PSS T++ +      L     L      H   ++ G   +  + N+++ +Y K GRV+DA
Sbjct: 147 PSSVTMLGLLSGVLELVHLQCL------HACVIQYGFGSDVALANSMLNVYCKCGRVEDA 200

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF+  + RD++SWN++VS  +Q     E +  L +M   GI+PD  +  S++ A +  
Sbjct: 201 QALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQ 260

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  GK +H + LR  +  D S + ++L+ MY  C  V    R+F+ +  K +  W AM
Sbjct: 261 SKLGVGKMVHGHILRAGLEQD-SHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAM 319

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I+G  QN+  + A+ +F +M + + + P+  T++SV+ AC    +FP    +HG+ ++  
Sbjct: 320 ISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQR 378

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
           +  D   QN+L+ MY++ G +E S ++FD M  RD VSWN +++G+   G    AL+L  
Sbjct: 379 IKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFN 438

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           EM+                   R +P+SIT++++L  C ++ AL +GK IH +  ++ L 
Sbjct: 439 EMRKA-----------------RQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLG 481

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
             +++ +ALVDMY+KCG L  A++ FD MP +++++W+ II  YG HG+G+  L +  + 
Sbjct: 482 PCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDF 541

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           +  G     ++PN V ++++ +ACSH+G+V +G+  F+ M  D+GIEP  +H AC+VDLL
Sbjct: 542 LHTG-----IQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLL 596

Query: 657 GRAGKVEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
            RAG+VE+AY     M   P  D  G    LL ACR   NVE+G+I A+ + +L+P  A 
Sbjct: 597 SRAGRVEEAYSFYKRMFPKPSMDVLGI---LLDACRTTGNVELGDIVAREIVILKPANAG 653

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
           +YV L++ Y+S + WD   +V  +MK + ++K PG S+IE    I  F     SH Q E+
Sbjct: 654 NYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEE 713

Query: 775 LHGFLENLSERMR 787
           +   +  L++R R
Sbjct: 714 IIDRVLLLNKRRR 726



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 214/411 (52%), Gaps = 19/411 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A+    RE +   I M    I+PD   F +++ A A    L +GK +H H+
Sbjct: 214 SWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHI 273

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G    S  +  +L+ MY KCG ++   +++F+ +  KD +SW +MI+ L +    D+
Sbjct: 274 LRAGLEQDS-HIETSLIGMYLKCG-NVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  FR ML S V PS+ T+ SV  AC+ L       LG  VHG  LR   + +    N+
Sbjct: 332 AVTVFRRMLKSRVMPSTATIASVLAACAELG---SFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G ++ + ++F     RD+VSWN IVS  +QN    +A++   +M     +PD
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRN----DILIDNSFVGSALVDMYCNCREVECG 338
            +++ S+L AC+ +  L  GK IH +  ++     ILID     +ALVDMY  C ++   
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID-----TALVDMYSKCGDLGSA 503

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           ++ FD +  + +  W+++I GYG +   E AL ++       G+ PN     S++ AC  
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT-GIQPNHVIYLSILSACSH 562

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           +    D+     H++    G +  +++   ++D+ SR GR+E + + +  M
Sbjct: 563 N-GLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM 612



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 201/433 (46%), Gaps = 32/433 (7%)

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           SF +    S+N I++ LS    F + ++    M      PD  +  S++ AC+ L++   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G   H   +  D    +S++ ++L++ Y      +  R+VFD + D+ +  W  MI  Y 
Sbjct: 67  GLSFHQRVIV-DGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYT 125

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +    + A  ++  M    G+ P++ TM  ++   +        + +H   I+ G G D 
Sbjct: 126 RAGEHDVAFSMYNIMRR-QGIQPSSVTMLGLLSGVLE---LVHLQCLHACVIQYGFGSDV 181

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + N+++++Y + GR+E ++ +F+ M+ RD +SWN++++GY   G   + L LL  M+  
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
             E                 P+  T  +++      S L  GK +H + +R  L  D  +
Sbjct: 242 GIE-----------------PDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++L+ MY KCG +N A R+F+ M  ++VI+W  +I     +      + + + M+    
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKS-- 342

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIE-PSPDHYACVVDLLGRA 659
               V P+  T  ++ AAC+  G    G  +  Y ++    ++ PS +    +V +  + 
Sbjct: 343 ---RVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS---LVTMYAKC 396

Query: 660 GKVEDAYQLINMM 672
           G +E +  + + M
Sbjct: 397 GHLEQSCSVFDRM 409


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/711 (36%), Positives = 394/711 (55%), Gaps = 34/711 (4%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRIT 141
           +L+A    + L  GK IH  VV  G   + + +  TL+N Y  C   ++D  K VFD + 
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQ-NDIFLCKTLINQYLSC--HLYDHAKCVFDNME 65

Query: 142 EKDQVS-WNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGL 199
              ++S WN ++A   +   +  ALE F  +L Y  ++P S+T  SV  AC  L R    
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRY--- 122

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            LG+ +H   ++ G   +  + ++L+ MY K    + A  LF    ++D+  WNT++S  
Sbjct: 123 VLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            Q+  F +A+ +   M   G +P+ V+I + + +C+ L  L+ G EIH   + +  L+D 
Sbjct: 183 YQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD- 241

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           SF+ SALVDMY  C  +E    +F+ +  K +  WN+MI+GYG        + LF +M  
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYN 301

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ P  TT+SS++  C RS    + + +HG+ I+  +  D +V ++LMD+Y + G++E
Sbjct: 302 -EGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVE 360

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           +++ IF  +     VSWN MI+GY   G+  +AL L  EM+    E +            
Sbjct: 361 LAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESD------------ 408

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
                +IT  +VL  C  L+AL KGKEIH   I   L  + VV  AL+DMYAKCG ++ A
Sbjct: 409 -----AITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA 463

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             VF  +P R++++W  +I AYG HG     LEL   M+        VKP+ V F+A+ +
Sbjct: 464 FSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSN-----VKPDRVAFLAILS 518

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           AC H+G+V EG   F +M + YGI P  +HY+C++DLLGRAG++ +AY+++   P   D 
Sbjct: 519 ACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDD 578

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
               S+L  ACR+H+N+++G   A+ L   +PD +S Y+LLSN+Y+SA  WD+   VR K
Sbjct: 579 VELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSK 638

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           MKE+G++K PGCSWIE   +I  F   D SH   E +   L  LS+ M  E
Sbjct: 639 MKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 255/500 (51%), Gaps = 34/500 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD++ +P+V KA  G+    LGK IH  ++K G  +  + V ++LV MYGKC +    
Sbjct: 102 LKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGL-MMDIVVGSSLVGMYGKCNAFEKA 160

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           ++ +F+ + EKD   WN++I+   + G +  ALE F +M     EP+S   V++  A S+
Sbjct: 161 IW-LFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNS---VTITTAISS 216

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            +R   L  G ++H   +  G   ++FI +AL+ MY K G ++ A  +F+    + +V+W
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAW 276

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N+++S        +  +   ++M   G+KP   +++S++  CS    L  GK +H Y +R
Sbjct: 277 NSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  D  FV S+L+D+Y  C +VE   ++F  I   K+  WN MI+GY       EAL 
Sbjct: 337 NRIQPD-VFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALG 395

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M + + +  +A T +SV+ AC +  A    + IH   I+  L  +  V  AL+DMY
Sbjct: 396 LFSEMRK-SYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMY 454

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G ++ + ++F  +  RD VSW +MIT Y   G    AL L  EM        ++NV 
Sbjct: 455 AKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEML-------QSNV- 506

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALV 546
                    KP+ +  + +L  CG    + +G     Y    M+    ++      S L+
Sbjct: 507 ---------KPDRVAFLAILSACGHAGLVDEG----CYYFNQMINVYGIIPRVEHYSCLI 553

Query: 547 DMYAKCGCLNFARRVFDLMP 566
           D+  + G L+ A  +    P
Sbjct: 554 DLLGRAGRLHEAYEILQQNP 573



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 220/438 (50%), Gaps = 15/438 (3%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P     C   W   +    +S  F++A+  +  M R   +P++      + + A + DL
Sbjct: 167 MPEKDVAC---WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDL 223

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
           + G +IH  ++  G+ L S  +++ LV+MYGKCG  +    ++F+++ +K  V+WNSMI+
Sbjct: 224 NRGMEIHEELINSGFLLDSF-ISSALVDMYGKCG-HLEMAIEIFEQMPKKTVVAWNSMIS 281

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
                G     ++ F+ M    V+P+  TL S+ + CS  +R   L  G+ VHG ++R  
Sbjct: 282 GYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR---LLEGKFVHGYTIRNR 338

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + + F+ ++LM +Y K G+V+ A+ +FK      +VSWN ++S      K  EA+    
Sbjct: 339 IQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFS 398

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M    ++ D ++  SVL ACS L  L+ GKEIH   +    L +N  V  AL+DMY  C
Sbjct: 399 EMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKK-LDNNEVVMGALLDMYAKC 457

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             V+    VF  +  + +  W +MIT YG + +   AL LF +M + + + P+     ++
Sbjct: 458 GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQ-SNVKPDRVAFLAI 516

Query: 393 VPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVR 450
           + AC  +    +        I + G+       + L+D+  R GR+ E  + +  + E+R
Sbjct: 517 LSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIR 576

Query: 451 DTVSWNTMITGYTICGQH 468
           D V    + T ++ C  H
Sbjct: 577 DDV--ELLSTLFSACRLH 592



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 37/253 (14%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L+ +L  C    +L +GK IH   +   L  D+ +   L++ Y  C   + A+ VFD M 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65

Query: 567 VRNVIT-WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS---- 621
               I+ WN ++  Y  +    E LEL + ++        +KP+  T+ ++F AC     
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLL----HYPYLKPDSYTYPSVFKACGGLHR 121

Query: 622 -------HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
                  H+ ++  G+ +      D  +  S      +V + G+    E A  L N MP 
Sbjct: 122 YVLGKMIHTCLIKTGLMM------DIVVGSS------LVGMYGKCNAFEKAIWLFNEMPE 169

Query: 675 EFDKAGAWSSLLGACRIHQNVE--IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD-- 730
           +      W++++       N +  +        F  EP+  +   + + I S A+L D  
Sbjct: 170 K--DVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVT---ITTAISSCARLLDLN 224

Query: 731 KAMDVRKKMKEMG 743
           + M++ +++   G
Sbjct: 225 RGMEIHEELINSG 237


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/739 (35%), Positives = 394/739 (53%), Gaps = 41/739 (5%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P+ F   +VL+A    + +SLG+Q+H   VK     ++V V   L+N+Y K G  M +  
Sbjct: 118 PNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLD-ANVYVGTALINLYAKLGC-MDEAM 175

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            VF  +  +  V+WN++I    + G   +ALE F  M    V P  F L S   ACS L 
Sbjct: 176 LVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALG 235

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
             +G   GRQ+HG + R   E +T ++N L+ +Y K  R+  A+ LF   E R+LVSW T
Sbjct: 236 FLEG---GRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTT 292

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S   QN    EA+     M   G +PDG +  S+L +C  L  +  G++IHA+ ++ D
Sbjct: 293 MISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKAD 352

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           +  D  +V +AL+DMY  C  +   R VFD +++     +NAMI GY +N    EA+ +F
Sbjct: 353 LEADE-YVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIF 411

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            +M   + L P+  T  S++       A    + IHG  IK G   D Y  +AL+D+YS+
Sbjct: 412 QRMRFFS-LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSK 470

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
              +  +KT+F+ +  +D V WN+MI G+    Q  +A+ L  ++               
Sbjct: 471 CSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQL--------------- 515

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
              +    PN  T + ++     L+++  G++ HA+ I+  +  D  V +AL+DMYAKCG
Sbjct: 516 --LLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCG 573

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +   R +F+     +VI WN +I  Y  HG  +E L++ + M        EV+PN VTF
Sbjct: 574 FIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLM-----GEAEVEPNYVTF 628

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           + + +AC+H+G V EG++ F  MK +Y IEP  +HYA VV+L GR+GK+  A + I  MP
Sbjct: 629 VGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMP 688

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            +   A  W SLL AC +  N EIG  AA+   L +P  +  YVLLSNIY+S  LW    
Sbjct: 689 IK-PAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVH 747

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           ++R++M   G  KE GCSWIE   E+H F+     H ++E ++  L+ L+  ++  GYVP
Sbjct: 748 NLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVP 807

Query: 794 DTSCVLHNVNEEEKETLLC 812
           DTS            TLLC
Sbjct: 808 DTS----------DHTLLC 816



 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 180/635 (28%), Positives = 322/635 (50%), Gaps = 40/635 (6%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           L   IHA     G  L  + + N L+  Y   G  + D   +FDR+  ++ VSW S+I+ 
Sbjct: 36  LNPAIHARATVAGR-LDDLFLTNLLLRGYSNLGR-LRDARHLFDRMPHRNLVSWGSVISM 93

Query: 155 LCRFGKWDLALEAFRMMLYSNVE-PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
             + G+ D A+  F     ++ E P+ F L SV  AC   ++   + LG QVHG ++++ 
Sbjct: 94  YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRAC---TQSKAVSLGEQVHGIAVKLD 150

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + N ++  AL+ +YAKLG +D+A  +F +   R  V+WNT+++  +Q      A+    
Sbjct: 151 LDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFD 210

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M + G++PD   +AS + ACS L  L+ G++IH YA R+    D S + + L+D+YC C
Sbjct: 211 RMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVI-NVLIDLYCKC 269

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +   R++FD +  + +  W  MI+GY QN ++ EA+ +F  M + AG  P+    +S+
Sbjct: 270 SRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ-AGWQPDGFACTSI 328

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + +C    A      IH H IK  L  D YV+NAL+DMY++   +  ++ +FD +   D 
Sbjct: 329 LNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDA 388

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           +S+N MI GY+      +A+ + + M+                     +P+ +T +++L 
Sbjct: 389 ISYNAMIEGYSKNRDLAEAVNIFQRMR-----------------FFSLRPSLLTFVSLLG 431

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
              +  A+   K+IH   I++  + D+   SAL+D+Y+KC  +N A+ VF+++  ++++ 
Sbjct: 432 VSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVI 491

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I  +  + +G+E ++L   ++  G     + PNE TF+AL    S    +  G   
Sbjct: 492 WNSMIFGHAQNEQGEEAIKLFNQLLLSG-----MAPNEFTFVALVTVASTLASMFHGQQ- 545

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F+      G++  P     ++D+  + G +++   L      E      W+S++     H
Sbjct: 546 FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE--DVICWNSMITTYAQH 603

Query: 693 QNVEIGEIAAQNLFLL--EPDVASHYVLLSNIYSS 725
            + E     A  +F L  E +V  +YV    + S+
Sbjct: 604 GHAE----EALQVFRLMGEAEVEPNYVTFVGVLSA 634



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 260/521 (49%), Gaps = 33/521 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD F   + + A + +  L  G+QIH +  +     +  +V N L+++Y KC S +  
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATE-TDTSVINVLIDLYCKC-SRLSA 274

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             K+FD +  ++ VSW +MI+   +      A+  F  M  +  +P  F   S+  +C +
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGS 334

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L+    +  GRQ+H + ++   E + ++ NAL+ MYAK   + +A+ +F +  + D +S+
Sbjct: 335 LA---AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++   S+N    EAV   ++M    ++P  ++  S+L   S    ++  K+IH   ++
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           +   +D  +  SAL+D+Y  C  V   + VF+ +  K + +WN+MI G+ QNE  EEA+ 
Sbjct: 452 SGTSLD-LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIK 510

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF ++  ++G+ PN  T  ++V       +    +  H   IK G+  D +V NAL+DMY
Sbjct: 511 LFNQL-LLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMY 569

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G I+  + +F+     D + WN+MIT Y   G   +AL + R M   E E       
Sbjct: 570 AKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVE------- 622

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALVD 547
                     PN +T + VL  C     + +G   H  ++++    D+  G    +++V+
Sbjct: 623 ----------PNYVTFVGVLSACAHAGFVGEGLN-HFNSMKS--NYDIEPGIEHYASVVN 669

Query: 548 MYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           ++ + G L+ A+   + MP++     W  ++ A  + G  +
Sbjct: 670 LFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAE 710



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 257/524 (49%), Gaps = 36/524 (6%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLF 240
           +L  V L+C         RL   +H  +   G  +  F+ N L+  Y+ LGR+ DA+ LF
Sbjct: 17  SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                R+LVSW +++S  +Q+ +   A+ +F+         P+   +ASVL AC+  + +
Sbjct: 77  DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAV 136

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+++H  A++ D L  N +VG+AL+++Y     ++    VF  +  +    WN +ITG
Sbjct: 137 SLGEQVHGIAVKLD-LDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITG 195

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q      AL LF +M  + G+ P+   ++S V AC           IHG+A +     
Sbjct: 196 YAQIGCGGVALELFDRM-GIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATET 254

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D  V N L+D+Y +  R+  ++ +FD ME R+ VSW TMI+GY     + +A+ +   M 
Sbjct: 255 DTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNM- 313

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                           T    +P+     ++L  CG+L+A+ +G++IHA+ I+  L  D 
Sbjct: 314 ----------------TQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADE 357

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            V +AL+DMYAKC  L  AR VFD +   + I++N +I  Y  + +  E + + + M   
Sbjct: 358 YVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRM--- 414

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA--CVVDLLG 657
             R   ++P+ +TF++L    S S +  E     + +    G   S D YA   ++D+  
Sbjct: 415 --RFFSLRPSLLTFVSLLGVSS-SQLAIELSKQIHGLIIKSG--TSLDLYAASALIDVYS 469

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           +   V DA  + NM+   +     W+S++     H   E GE A
Sbjct: 470 KCSLVNDAKTVFNML--HYKDMVIWNSMIFG---HAQNEQGEEA 508



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 232/433 (53%), Gaps = 17/433 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +++   EAI  +  MT++  QPD FA  ++L +   +  +  G+QIHAHV
Sbjct: 289 SWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHV 348

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     +   V N L++MY KC   + +   VFD + E D +S+N+MI    +      
Sbjct: 349 IKADLE-ADEYVKNALIDMYAKC-EHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAE 406

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F+ M + ++ PS  T VS+ L  S  S +  + L +Q+HG  ++ G   + +  +A
Sbjct: 407 AVNIFQRMRFFSLRPSLLTFVSL-LGVS--SSQLAIELSKQIHGLIIKSGTSLDLYAASA 463

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y+K   V+DAKT+F     +D+V WN+++   +QN++  EA+    Q+ L G+ P+
Sbjct: 464 LIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPN 523

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRV 341
             +  +++   S L  +  G++ HA+ ++    +DN   V +AL+DMY  C  ++ GR +
Sbjct: 524 EFTFVALVTVASTLASMFHGQQFHAWIIKAG--VDNDPHVSNALIDMYAKCGFIKEGRML 581

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+    + +  WN+MIT Y Q+ + EEAL +F  M E A + PN  T   V+ AC  +  
Sbjct: 582 FESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGE-AEVEPNYVTFVGVLSACAHA-G 639

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTM 458
           F  +   H +++K     +  +++  ++++++ R G++  +K   + M ++   + W ++
Sbjct: 640 FVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSL 699

Query: 459 ITGYTICGQHGDA 471
           ++    C   G+A
Sbjct: 700 LSA---CHLFGNA 709


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/560 (42%), Positives = 337/560 (60%), Gaps = 25/560 (4%)

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R VF+ I +      N++I GY       +A+ LF ++  + GL P+  T  S+  +C 
Sbjct: 31  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPSLFKSC- 88

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                 + + +H H+ KLG   D Y+QN LM+MYS  G +  ++ +FD M  +  VSW T
Sbjct: 89  --GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 146

Query: 458 MITGYTICGQHGDALMLLREMQ--------------NMEEEKNRNNVYDLDETVLRP-KP 502
           MI  Y       +A+ L R M+              ++E+      +   +E  L   K 
Sbjct: 147 MIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 206

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           + +T+ ++L  C  L AL  GK +H Y  +  +  DV +G+ALVDMYAKCG +  A RVF
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 266

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
             MP ++V+TW  +I+   M G+G + LEL   M     +  EVKP+ +TF+ + AACSH
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-----QMSEVKPDAITFVGVLAACSH 321

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
           +G+V+EG+  F  M + YGI+PS +HY C+VD+LGRAG++ +A  LI  MP   D     
Sbjct: 322 AGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF-VL 380

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
             LL ACRIH N+ + E AAQ L  L+P     YVLLSNIYSS + W+ A  +R+ M E 
Sbjct: 381 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 440

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
            ++K PGCS IE G  +H+F+ GD SH QS +++  L+++  R++  GYVPD S VL ++
Sbjct: 441 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDM 500

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           +E+EKE  L  HSEKLAIAFG+L+T PGT IRV KNLRVC+DCH A KFIS++ +REII+
Sbjct: 501 DEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIV 560

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFHHF  G+CSC D+W
Sbjct: 561 RDRNRFHHFTKGSCSCRDFW 580



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 182/389 (46%), Gaps = 48/389 (12%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF++I      + NS+I           A+  +++M+   ++P  FT  S+  +C  L  
Sbjct: 34  VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 93

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                 G+Q+H +S ++G   + +I N LM MY+  G +  A+ +F    ++ +VSW T+
Sbjct: 94  ------GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 147

Query: 255 VSSLSQNDKFLEAVMFLR--------------------------------QMALRGIKPD 282
           + + +Q D   EA+   R                                +M L G+K D
Sbjct: 148 IGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 207

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++AS+L AC+HL  L+ GK +H Y  +  I +D + +G+ALVDMY  C  +E   RVF
Sbjct: 208 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA-LGTALVDMYAKCGSIESAMRVF 266

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             + +K +  W A+I G        +AL LF +M +++ + P+A T   V+ AC  S A 
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDAITFVGVLAAC--SHAG 323

Query: 403 PDKEGI---HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
              EGI   +    K G+         ++DM  R GRI  ++ +  +M +     +  ++
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM--APDYFVLV 381

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRN 488
              + C  HG+ ++  R  Q + E   +N
Sbjct: 382 GLLSACRIHGNLVVAERAAQQLIELDPKN 410



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 47/290 (16%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R     N  R+AIL Y  M    + PD F FP++ K+  G+  L  GKQ+H H  K G+
Sbjct: 50  IRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS-CGV--LCEGKQLHCHSTKLGF 106

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S   + NTL+NMY  CG  +    KVFD++  K  VSW +MI     + +WDL  EA 
Sbjct: 107 A-SDAYIQNTLMNMYSNCGC-LVSARKVFDKMVNKSVVSWATMIGA---YAQWDLPHEAI 161

Query: 169 RM---------------MLYSNVEPSSF--------------------TLVSVALACSNL 193
           ++               M+  +VE S +                    T+ S+ +AC++L
Sbjct: 162 KLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHL 221

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                L LG+ +H    +   E +  +  AL+ MYAK G ++ A  +F+   ++D+++W 
Sbjct: 222 G---ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWT 278

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            ++  L+   + L+A+    +M +  +KPD ++   VL ACSH  +++ G
Sbjct: 279 ALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 328



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 53/369 (14%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +  A+ +F    +    + N+I+   +  +   +A++F + M L+G+ PD  +  S+ 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +C    +L  GK++H ++ +     D +++ + L++MY NC  +   R+VFD + +K +
Sbjct: 86  KSCG---VLCEGKQLHCHSTKLGFASD-AYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKME-------------------------------EV 379
             W  MI  Y Q +   EA+ LF +ME                               ++
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           +G+  +  TM+S++ AC    A    + +H +  K  +  D  +  AL+DMY++ G IE 
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +F +M  +D ++W  +I G  +CGQ   AL L  EMQ  E                 
Sbjct: 262 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE----------------- 304

Query: 500 PKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
            KP++IT + VL  C     + +G    ++   +  +   +     +VDM  + G +  A
Sbjct: 305 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364

Query: 559 RRVFDLMPV 567
             +   MP+
Sbjct: 365 EDLIQNMPM 373



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +      + + EA+  + EM  S ++ D     ++L A   +  L LGK +H ++ 
Sbjct: 176 WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE 235

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K    +  V +   LV+MY KCGS +    +VF  + EKD ++W ++I  L   G+   A
Sbjct: 236 KEKIEV-DVALGTALVDMYAKCGS-IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 293

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN 192
           LE F  M  S V+P + T V V  ACS+
Sbjct: 294 LELFHEMQMSEVKPDAITFVGVLAACSH 321


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/691 (36%), Positives = 389/691 (56%), Gaps = 52/691 (7%)

Query: 216  NTFIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLS------------QN 261
            ++F+   L+  Y   G  ++A +L+    ++D+  +S     S L             +N
Sbjct: 410  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKN 469

Query: 262  DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML--------DTGKEIHAYALRND 313
             +  E +    QM    ++PD V++ SV  ACS L  L          G+ +H + +R  
Sbjct: 470  GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRA 529

Query: 314  ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            +  +  F+G AL+++Y +   +    +VF+ I +K I  WN +I+ + +N   EEAL+LF
Sbjct: 530  MDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLF 589

Query: 374  IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
            ++M+   GL P++ +++S + AC           IHG+ IK G   D +VQNAL+DMY++
Sbjct: 590  VQMQ-TQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAK 647

Query: 434  MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             G +  +  +F+ ++ +  V+WN+MI G++  G   +A+ L  +M          N   +
Sbjct: 648  CGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYM--------NCVKM 699

Query: 494  DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            D+         +T ++V+  C  L  L KGK +H   I   L  D  + +AL DMY+KCG
Sbjct: 700  DK---------LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCG 750

Query: 554  CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
             L  A  VFD M  R++++W+V+I  YGMHG+    + L   M+  G     +KPN++TF
Sbjct: 751  ELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG-----IKPNDITF 805

Query: 614  IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            + + +ACSH+G V EG  L++    ++G+EP  DH+AC+VDLL RAG +  AYQ+I  +P
Sbjct: 806  MHILSACSHAGAVEEG-KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLP 864

Query: 674  PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
               + +  W +LL  CRIH+ ++I +   +NL  ++     +Y LLSNIY+    WDK  
Sbjct: 865  FPANSS-IWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFG 923

Query: 734  DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY-- 791
             VR  MK  G+RK PG S IE   +I++F  GD SH Q++ ++ FLEN    +  + Y  
Sbjct: 924  KVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDS 983

Query: 792  VPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKF 851
             PD S V    ++  KE  +  HSEKLAIAFGI+NT PGTT+R++KNLRVC DCH   K 
Sbjct: 984  EPDNSIV--GTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKI 1041

Query: 852  ISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             SKI  REII+RD+ RFH F+NG+CSC DYW
Sbjct: 1042 ASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 215/465 (46%), Gaps = 68/465 (14%)

Query: 58  FREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLG-------------------- 96
           F EA+  Y EM   D  Q  NF FP+VLKA +G  DLS+G                    
Sbjct: 427 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEA 486

Query: 97  --------------------------------KQIHAHVVKYGYGLSSVTVANTLVNMYG 124
                                           + +H  V++         +   L+ +Y 
Sbjct: 487 VEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 546

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
             G ++ D +KVF+ I EK  +SWN++I+   R G+ + AL  F  M    + P S++L 
Sbjct: 547 DTG-NLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 605

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           S   AC  +S     +LG Q+HG  ++ G +N F+ NAL+ MYAK G V  A  +F+  +
Sbjct: 606 SSLSACGTISFS---QLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIK 662

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           ++ LV+WN+++   SQN   +EA+    QM +  +K D ++  SV+ ACSHL  L+ GK 
Sbjct: 663 EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKW 722

Query: 305 IH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           +H     Y LR D     S++ +AL DMY  C E++    VFD +S++ I  W+ MI GY
Sbjct: 723 VHHKLIMYGLRKD-----SYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGY 777

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
           G +      + LF +M   +G+ PN  T   ++ AC  + A  + +       + G+   
Sbjct: 778 GMHGQINATISLFNQMLG-SGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPK 836

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTI 464
                 ++D+ SR G +  +  I   +      S W  ++ G  I
Sbjct: 837 HDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 881



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 7/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+ Q  EA+L +++M    + PD+++  + L A   I    LG QIH ++
Sbjct: 568 SWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYI 627

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G    +  V N L++MY KCG  +    K+F++I EK  V+WNSMI    + G    
Sbjct: 628 IKTGN--FNDFVQNALIDMYAKCGF-VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVE 684

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M  + V+    T +SV  ACS+L     L  G+ VH   +  G   ++++  A
Sbjct: 685 AITLFDQMYMNCVKMDKLTFLSVIQACSHLGY---LEKGKWVHHKLIMYGLRKDSYLDTA 741

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MY+K G +  A  +F    +R +VSW+ +++    + +    +    QM   GIKP+
Sbjct: 742 LTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPN 801

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            ++   +L ACSH   ++ GK
Sbjct: 802 DITFMHILSACSHAGAVEEGK 822



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 37/230 (16%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H H    GL R       L++ Y+++G  E SK +FD     D+  W  +I  Y   G 
Sbjct: 367 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 426

Query: 468 HGDALMLLREMQNMEEEKNRNNVY--------------------------DLDETVLRP- 500
             +A+ L  EM   ++ +  N V+                          D+   ++   
Sbjct: 427 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEA 486

Query: 501 -KPNSITLMTVLPGC--------GALSALAKGKEIHAYAIRNMLATDV-VVGSALVDMYA 550
            +P+S+T+++V   C        G L  + +G+ +H + IR  +  ++  +G AL+++YA
Sbjct: 487 VEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 546

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             G L    +VF+ +  + +++WN +I  +  +G+ +E L L   M  +G
Sbjct: 547 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG 596



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 145/354 (40%), Gaps = 62/354 (17%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           NS   +T    C   + L    ++HA+     L       + L++ YA+ G    ++RVF
Sbjct: 347 NSSRSLTSHKRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVF 403

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS- 621
           D  P  +   W V+I  Y   G  +E + L   MV +     + + +   F ++  ACS 
Sbjct: 404 DTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQ----DQTQISNFVFPSVLKACSG 459

Query: 622 --------HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL--------LGRAGKVED- 664
                    +G  SEG+D+F +M  +  +EP       V +         LGR G+V++ 
Sbjct: 460 FGDLSVGGKNGQASEGLDMFSQMISE-AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEG 518

Query: 665 ----AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA-AQNLF--LLEPDVASHYV 717
                + +   M PE D        LG   +    + G +     +F  + E  + S   
Sbjct: 519 RSVHGFVIRRAMDPELD-------FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 571

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKE--------PGCSWIEF---GDEIHKFLAGD 766
           L+S I++     ++A+ +  +M+  G+  +          C  I F   G +IH ++   
Sbjct: 572 LIS-IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKT 630

Query: 767 GSHQQSEQLHGFLEN-LSERMRKEGYVPDTSCVLHNVNEEEKET---LLCGHSE 816
           G+       + F++N L +   K G+V   + +   + E+   T   ++CG S+
Sbjct: 631 GN------FNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQ 678


>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
          Length = 717

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/632 (36%), Positives = 373/632 (59%), Gaps = 33/632 (5%)

Query: 258 LSQNDKFLEAVMFLRQMALRGI---KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           LS++ K  EAV  +   +        P+  +   +L AC   + L  G +I +  L N  
Sbjct: 112 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYT--DLLHACISAKSLHHGIKICSLILNNPS 169

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI---ALWNAMITGYGQNEYDEEALM 371
           L  N  + S L+ ++  CR ++  R++FD ++D  +    +W AM  GY +N    +AL+
Sbjct: 170 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 229

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +++ M   + + P   ++S  + ACV  +      GIH   +K     D+ V N L+ +Y
Sbjct: 230 VYVDML-CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 288

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
              G  + ++ +FD M  R+ V+WN++I+  +   +  +   L R+MQ            
Sbjct: 289 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ------------ 336

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
             +E +     +  TL T+LP C  ++AL  GKEIHA  +++    DV + ++L+DMY K
Sbjct: 337 --EEMI---GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGK 391

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG + ++RRVFD+M  +++ +WN+++  Y ++G  +EV+ L + M+  G     V P+ +
Sbjct: 392 CGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG-----VAPDGI 446

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+AL + CS +G+   G+ LF +MK ++ + P+ +HYAC+VD+LGRAGK+++A ++I  
Sbjct: 447 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 506

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP +   A  W SLL +CR+H NV +GEIAA+ LF+LEP    +YV++SNIY+ A++WD 
Sbjct: 507 MPFK-PSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDN 565

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG-SHQQSEQLHGFLENLSERMRKEG 790
              +R+ MK+ GV+KE GCSW++  D+I  F+AG G   + S++       L E + K G
Sbjct: 566 VDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSG 625

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y P+TS VLH+V+EE K   +CGHSE+LA  + +++T  G  IR+ KNLRVC DCH   K
Sbjct: 626 YSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMK 685

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +S++  R I+LRD +RFHHF +G CSC DYW
Sbjct: 686 IVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 24/348 (6%)

Query: 135 KVFDRITEKDQVS---WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL-AC 190
           K+FD +T+   ++   W +M     R G    AL  +  ML S +EP +F+ +SVAL AC
Sbjct: 195 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFS-ISVALKAC 253

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
            +L     LR+GR +H   ++  E  +  + N L+ +Y + G  DDA+ +F    +R++V
Sbjct: 254 VDLK---DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 310

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +WN+++S LS+  +  E     R+M    I     ++ ++LPACS +  L TGKEIHA  
Sbjct: 311 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 370

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L++    D   + S L+DMY  C EVE  RRVFD +  K +A WN M+  Y  N   EE 
Sbjct: 371 LKSKEKPDVPLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 429

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQ 424
           + LF  M E +G+ P+  T  +++  C  S+    + G+          ++    + Y  
Sbjct: 430 INLFEWMIE-SGVAPDGITFVALLSGC--SDTGLTEYGLSLFERMKTEFRVSPALEHYA- 485

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDA 471
             L+D+  R G+I+ +  + + M  + + S W +++     C  HG+ 
Sbjct: 486 -CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS---CRLHGNV 529



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 135/251 (53%), Gaps = 6/251 (2%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R+   R+A++ Y++M  S I+P NF+    LKA   ++DL +G+ IHA +VK    +  
Sbjct: 219 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 278

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V V N L+ +Y + G    D  KVFD ++E++ V+WNS+I+ L +  +       FR M 
Sbjct: 279 V-VYNVLLKLYMESGL-FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 336

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLG 231
              +  S  TL ++  ACS ++    L  G+++H   L+  E  +  ++N+LM MY K G
Sbjct: 337 EEMIGFSWATLTTILPACSRVA---ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 393

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V+ ++ +F     +DL SWN +++  + N    E +     M   G+ PDG++  ++L 
Sbjct: 394 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLS 453

Query: 292 ACSHLEMLDTG 302
            CS   + + G
Sbjct: 454 GCSDTGLTEYG 464


>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
 gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/632 (36%), Positives = 373/632 (59%), Gaps = 33/632 (5%)

Query: 258 LSQNDKFLEAVMFLRQMALRGI---KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           LS++ K  EAV  +   +        P+  +   +L AC   + L  G +I +  L N  
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYT--DLLHACISAKSLHHGIKICSLILNNPS 162

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI---ALWNAMITGYGQNEYDEEALM 371
           L  N  + S L+ ++  CR ++  R++FD ++D  +    +W AM  GY +N    +AL+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           +++ M   + + P   ++S  + ACV  +      GIH   +K     D+ V N L+ +Y
Sbjct: 223 VYVDML-CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
              G  + ++ +FD M  R+ V+WN++I+  +   +  +   L R+MQ            
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ------------ 329

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
             +E +     +  TL T+LP C  ++AL  GKEIHA  +++    DV + ++L+DMY K
Sbjct: 330 --EEMI---GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGK 384

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG + ++RRVFD+M  +++ +WN+++  Y ++G  +EV+ L + M+  G     V P+ +
Sbjct: 385 CGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG-----VAPDGI 439

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+AL + CS +G+   G+ LF +MK ++ + P+ +HYAC+VD+LGRAGK+++A ++I  
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP +   A  W SLL +CR+H NV +GEIAA+ LF+LEP    +YV++SNIY+ A++WD 
Sbjct: 500 MPFK-PSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDN 558

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG-SHQQSEQLHGFLENLSERMRKEG 790
              +R+ MK+ GV+KE GCSW++  D+I  F+AG G   + S++       L E + K G
Sbjct: 559 VDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSG 618

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y P+TS VLH+V+EE K   +CGHSE+LA  + +++T  G  IR+ KNLRVC DCH   K
Sbjct: 619 YSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMK 678

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +S++  R I+LRD +RFHHF +G CSC DYW
Sbjct: 679 IVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 24/348 (6%)

Query: 135 KVFDRITEKDQVS---WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL-AC 190
           K+FD +T+   ++   W +M     R G    AL  +  ML S +EP +F+ +SVAL AC
Sbjct: 188 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFS-ISVALKAC 246

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
            +L     LR+GR +H   ++  E  +  + N L+ +Y + G  DDA+ +F    +R++V
Sbjct: 247 VDLK---DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +WN+++S LS+  +  E     R+M    I     ++ ++LPACS +  L TGKEIHA  
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L++    D   + S L+DMY  C EVE  RRVFD +  K +A WN M+  Y  N   EE 
Sbjct: 364 LKSKEKPDVPLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQ 424
           + LF  M E +G+ P+  T  +++  C  S+    + G+          ++    + Y  
Sbjct: 423 INLFEWMIE-SGVAPDGITFVALLSGC--SDTGLTEYGLSLFERMKTEFRVSPALEHYA- 478

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDA 471
             L+D+  R G+I+ +  + + M  + + S W +++     C  HG+ 
Sbjct: 479 -CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS---CRLHGNV 522



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 135/251 (53%), Gaps = 6/251 (2%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           +R+   R+A++ Y++M  S I+P NF+    LKA   ++DL +G+ IHA +VK    +  
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 271

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           V V N L+ +Y + G    D  KVFD ++E++ V+WNS+I+ L +  +       FR M 
Sbjct: 272 V-VYNVLLKLYMESGL-FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLG 231
              +  S  TL ++  ACS ++    L  G+++H   L+  E  +  ++N+LM MY K G
Sbjct: 330 EEMIGFSWATLTTILPACSRVA---ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            V+ ++ +F     +DL SWN +++  + N    E +     M   G+ PDG++  ++L 
Sbjct: 387 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLS 446

Query: 292 ACSHLEMLDTG 302
            CS   + + G
Sbjct: 447 GCSDTGLTEYG 457


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/612 (38%), Positives = 351/612 (57%), Gaps = 64/612 (10%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           +IHA  LR   L  N  +   L   Y     ++C   VF+   +  +  ++A+I  + Q+
Sbjct: 65  QIHASLLRRG-LYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              + A   + +M    G+ PNA T SSV+ +C    +    + +H  AIKLGLG D YV
Sbjct: 124 RLFDRAFGYYSQMLS-CGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYV 178

Query: 424 QNALMDMYSR-------------------------------MGRIEISKTIFDDMEVRDT 452
           +  L+D+Y+R                               MG ++ ++++F+ M+ RD 
Sbjct: 179 RTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDV 238

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V WN MI GY   G   ++L L R M                  V +  PN +T++ VL 
Sbjct: 239 VCWNVMIGGYAQSGVPNESLKLFRRM-----------------LVAKAIPNEVTVLAVLS 281

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            CG L AL  G+ IH+Y     +  +V VG+AL+DMY+KCG L  AR VFD +  ++V+ 
Sbjct: 282 ACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 341

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +I+ Y MHG  Q  L+L + M   G      KP ++TFI + +AC H G+V EG   
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGH-----KPTDITFIGILSACGHGGLVEEGRSF 396

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M+D YGIEP  +HY C+V+LLGRAG +E+AY L+  M    D    W +LLG CR+H
Sbjct: 397 FRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPV-LWGTLLGCCRLH 455

Query: 693 QNVEIGEIAAQNLFLLEPDVASH--YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
            N+++GE  A+  FL++  +A+   YVLLSN+Y++   W+    +R  MKE G+ KE GC
Sbjct: 456 VNIKLGEEIAK--FLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGC 513

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S IE  +++H+F+AG+  H +S++++  L  ++  ++  GY P T  VLH++ EE+KE  
Sbjct: 514 SSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQS 573

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIAFG+++T PGTT+++ KNLRVC+DCH   K IS+I  R+I++RD  RFHH
Sbjct: 574 LEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHH 633

Query: 871 FKNGTCSCGDYW 882
           F++G CSCGDYW
Sbjct: 634 FEDGLCSCGDYW 645



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 172/353 (48%), Gaps = 55/353 (15%)

Query: 204 QVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q+H + LR G ++  I+N  L   YA LGR+D +  +F +F++ ++ S++ I+ S  Q+ 
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            F  A  +  QM   G++P+  + +SVL +CS    L++GK +H  A++  +  D  +V 
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSD-LYVR 179

Query: 323 SALVDMYCNCREVECGRRVFD-------------------------------FISDKKIA 351
           + LVD+Y    +V C R++FD                                + ++ + 
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            WN MI GY Q+    E+L LF +M  VA   PN  T+ +V+ AC +  A      IH +
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRML-VAKAIPNEVTVLAVLSACGQLGALESGRWIHSY 298

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
               G+  + +V  AL+DMYS+ G +E ++ +FD +  +D V+WN+MI GY + G    A
Sbjct: 299 IENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHA 358

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
           L L  EM                 T    KP  IT + +L  CG    + +G+
Sbjct: 359 LQLFEEM-----------------TETGHKPTDITFIGILSACGHGGLVEEGR 394



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 192/400 (48%), Gaps = 53/400 (13%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QIHA +++ G   + + +   L   Y   G     V+ VF+   E +  S++++I +  +
Sbjct: 65  QIHASLLRRGLYHNPI-LNFKLQRSYAALGRLDCSVF-VFNTFDEPNVFSFSAIIHSHVQ 122

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC------------------SNLSRRDGL 199
              +D A   +  ML   VEP++FT  SV  +C                  S+L  R GL
Sbjct: 123 SRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGL 182

Query: 200 -----RLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                R G  V    L  ++ E +   +  ++  Y+K+G +D A++LF+  ++RD+V WN
Sbjct: 183 VDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWN 242

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++   +Q+    E++   R+M +    P+ V++ +VL AC  L  L++G+ IH+Y    
Sbjct: 243 VMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK 302

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            I I N  VG+AL+DMY  C  +E  R VFD I DK +  WN+MI GY  + + + AL L
Sbjct: 303 GIQI-NVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQL 361

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-----LGRDRY----- 422
           F +M E  G  P   T   ++ AC            HG  ++ G     L RD+Y     
Sbjct: 362 FEEMTE-TGHKPTDITFIGILSACG-----------HGGLVEEGRSFFRLMRDKYGIEPK 409

Query: 423 --VQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMI 459
                 ++++  R G +E +  +  +M +  D V W T++
Sbjct: 410 IEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 39/286 (13%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           + S  +S  F  A   Y +M    ++P+ F F +VLK+ +    L  GK +H   +K G 
Sbjct: 117 IHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGL 172

Query: 109 GLSSVTVANTLVNMYGK---------------------------CGSDMWDVYK---VFD 138
           G S + V   LV++Y +                           C S M ++ K   +F+
Sbjct: 173 G-SDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFE 231

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + E+D V WN MI    + G  + +L+ FR ML +   P+  T+++V  AC  L     
Sbjct: 232 GMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLG---A 288

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L  GR +H      G + N  +  AL+ MY+K G ++DA+ +F    D+D+V+WN+++  
Sbjct: 289 LESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVG 348

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            + +     A+    +M   G KP  ++   +L AC H  +++ G+
Sbjct: 349 YAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 12/227 (5%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
             G + R    W   +   A+S    E++  +  M  +   P+     AVL A   +  L
Sbjct: 230 FEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGAL 289

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G+ IH+++   G  ++ V V   L++MY KCGS + D   VFDRI +KD V+WNSMI 
Sbjct: 290 ESGRWIHSYIENKGIQIN-VHVGTALIDMYSKCGS-LEDARLVFDRIRDKDVVAWNSMIV 347

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN----LSRRDGLRLGRQVHGNS 209
                G    AL+ F  M  +  +P+  T + +  AC +       R   RL R  +G  
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIE 407

Query: 210 LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIV 255
            ++  +       ++ +  + G +++A  L K+     D V W T++
Sbjct: 408 PKIEHY-----GCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/647 (37%), Positives = 381/647 (58%), Gaps = 35/647 (5%)

Query: 243 FEDRDLVSWNT--IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +  +D+ S N   ++ SL +     +AV    Q+      P   +   ++ +C     L 
Sbjct: 36  YPTKDIKSNNNDDLIQSLCRGGNLKQAV----QLLCCEPNPTKKTFELLINSCIEQNSLS 91

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G ++H + L    L  + ++ + L++MYC+   V+   +VFD   +K I +WNA+    
Sbjct: 92  DGVDVH-HRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRAL 150

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE--AFPDKEG--IHGHAIKLG 416
                 E+ L+L+ +M  + G+  N  T + V+ ACV SE    P ++G  IH H ++ G
Sbjct: 151 AMASRGEDLLVLYGQMNWI-GIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHG 209

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                +V   L+D+Y+R G +  + ++F  M  ++ VSW+ MI  Y        AL L +
Sbjct: 210 YEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQ 269

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            M           + +  +TV    PN IT+++VL  C +L+AL  GK +HAY +R  L 
Sbjct: 270 IM-----------MLEACDTV----PNPITMVSVLQACASLAALEHGKLVHAYVLRRGLD 314

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           + + V + L+ MY +CG ++  +RVFD M  R+VI+WN +I  YGMHG G++ +++ +NM
Sbjct: 315 STLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENM 374

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           +  G     V P+ +TFI +  ACSH+G+V E   LF  M + Y I P  +HYAC+VD+L
Sbjct: 375 INRG-----VSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDIL 429

Query: 657 GRAGKVEDAYQLINMMPPEFDKA-GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           GRA ++++A +LI  M  +F      W SLLG+CRIH NVE+ E A+  LF LEP  A +
Sbjct: 430 GRANRLDEAIELIQNM--DFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGN 487

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           YVLLS+IY+ +++W+    VRK+++  G++K P CSWIE   +I+  ++ +  + Q E+L
Sbjct: 488 YVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEEL 547

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
             FL  L   ++ +GYVP T+ V ++++EEEKE ++ GHS KLA+AFG++NT  G  IR+
Sbjct: 548 CAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRI 607

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + NLR+C DCH   KF+SK  +REI+LRDV RFH FK+G CSCGDYW
Sbjct: 608 SNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 178/382 (46%), Gaps = 31/382 (8%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC-SNLSRRDGLRLGRQVHG 207
           + +I +LCR G    A++    +L     P+  T   +  +C    S  DG+ +  ++ G
Sbjct: 47  DDLIQSLCRGGNLKQAVQ----LLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVG 102

Query: 208 NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           + L   + + ++   L+ MY  LG VD A  +F    ++ +  WN I  +L+   +  + 
Sbjct: 103 SGL---DQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDL 159

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEM----LDTGKEIHAYALRNDILIDNSFVGS 323
           ++   QM   GI  +  +   VL AC   E+    L  GKEIHA+ LR+     +  V +
Sbjct: 160 LVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYE-GHVHVMT 218

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF-IKMEEVAGL 382
            L+D+Y     V     VF  + DK I  W+AMI  Y +NE   +AL LF I M E    
Sbjct: 219 TLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDT 278

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  TM SV+ AC    A    + +H + ++ GL     V N L+ MY R G I   + 
Sbjct: 279 VPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR 338

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD M+ RD +SWN++I+ Y   G HG     ++  +NM    NR              P
Sbjct: 339 VFDYMKKRDVISWNSLISIY---GMHGLGKKAIQIFENM---INRG-----------VSP 381

Query: 503 NSITLMTVLPGCGALSALAKGK 524
           + IT +TVL  C     + + K
Sbjct: 382 SYITFITVLCACSHAGLVEEAK 403



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 192/378 (50%), Gaps = 21/378 (5%)

Query: 26  ATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLK 85
           +  A+  P    ++   +  I+SL    R    ++A+    ++   +  P    F  ++ 
Sbjct: 30  SLNASGYPTKDIKSNNNDDLIQSL---CRGGNLKQAV----QLLCCEPNPTKKTFELLIN 82

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
           +      LS G  +H  +V  G GL     +A  L+NMY   GS +    KVFD   EK 
Sbjct: 83  SCIEQNSLSDGVDVHHRLV--GSGLDQDPYLATKLINMYCDLGS-VDHACKVFDETREKT 139

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC--SNLSRRDGLRLG 202
              WN++   L    + +  L  +  M +  +  + FT   V  AC  S LS    LR G
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICP-LRKG 198

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +++H + LR G E +  +M  L+ +YA+ G V  A ++F +  D+++VSW+ +++  ++N
Sbjct: 199 KEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKN 258

Query: 262 DKFLEAVMFLRQMALRGIK--PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +  ++A+   + M L      P+ +++ SVL AC+ L  L+ GK +HAY LR    +D++
Sbjct: 259 EMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRG--LDST 316

Query: 320 F-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             V + L+ MY  C E+  G+RVFD++  + +  WN++I+ YG +   ++A+ +F  M  
Sbjct: 317 LPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMIN 376

Query: 379 VAGLWPNATTMSSVVPAC 396
             G+ P+  T  +V+ AC
Sbjct: 377 -RGVSPSYITFITVLCAC 393



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 141/266 (53%), Gaps = 12/266 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA----GIQDLSLGKQIH 100
           W    R+ A +++  + ++ Y +M    I  + F +  VLKA       I  L  GK+IH
Sbjct: 143 WNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIH 202

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           AH++++GY    V V  TL+++Y + G   +    VF  + +K+ VSW++MIA   +   
Sbjct: 203 AHILRHGYE-GHVHVMTTLLDVYARFGYVSY-ASSVFGAMPDKNIVSWSAMIACYAKNEM 260

Query: 161 WDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
              ALE F++M+    +  P+  T+VSV  AC++L+    L  G+ VH   LR G  +T 
Sbjct: 261 PMKALELFQIMMLEACDTVPNPITMVSVLQACASLA---ALEHGKLVHAYVLRRGLDSTL 317

Query: 219 -IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            ++N L+ MY + G +   + +F   + RD++SWN+++S    +    +A+     M  R
Sbjct: 318 PVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINR 377

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGK 303
           G+ P  ++  +VL ACSH  +++  K
Sbjct: 378 GVSPSYITFITVLCACSHAGLVEEAK 403


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/840 (32%), Positives = 441/840 (52%), Gaps = 53/840 (6%)

Query: 61  AILSYIEMTRSDIQP--------DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
           A L  + ++ S + P        ++  +  ++++      L+ GK +H+H++K  +    
Sbjct: 35  ATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFR-PC 93

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           + + N L+NMY KCG D     K+FD++++ + V++NS+I+   +    D  +  F    
Sbjct: 94  LFLQNNLLNMYCKCG-DTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKAR 152

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLG 231
              ++   +T      ACS   +   L  G+ +HG  L  G  +  ++ N+L+ MY+K G
Sbjct: 153 RLGLKLDKYTCAGALTACS---QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG 209

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
           +VD A+ LF   +  D VSWN++++   QN K+ E +  L++M   G+  +  ++ S L 
Sbjct: 210 QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269

Query: 292 ACSH----LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           ACS      +M   G  +H +A++  + +D   VG+AL+DMY     ++   ++FD + D
Sbjct: 270 ACSSNFNGCKMF--GTMLHDHAIKLGLHLD-VVVGTALLDMYAKTGSLDDAIQIFDQMVD 326

Query: 348 KKIALWNAMITGYGQNEYDEE-----ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           K + ++NAM+ G  Q E  E+     AL LF +M+   G+ P+  T SS++ AC+  E F
Sbjct: 327 KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKS-CGIKPSMFTYSSLLKACIIVEDF 385

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +H    K GL  D Y+ + L+D+YS +G +  +   F+ +     V    MI GY
Sbjct: 386 KFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGY 445

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G+   AL L  E+   EE                 KP+     T++  C  +  L  
Sbjct: 446 LQNGEFESALSLFYELLTYEE-----------------KPDEFIXSTIMSSCANMGMLRS 488

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G++I  +A +  ++   +  ++ + MYAK G L  A   F  M   ++++W+ +I +   
Sbjct: 489 GEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQ 548

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG   E L   + M + G     ++PN   F+ +  ACSH G+V EG+  F  M+ DY +
Sbjct: 549 HGHAMEALRFFELMKSCG-----IEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKM 603

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +    H  CVVDLLGRAG++ DA  LI  +  E +    W +LL ACRIH++    +  A
Sbjct: 604 KLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPV-MWRALLSACRIHKDTVTAQRVA 662

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           Q +  LEP  ++ YVLL NIY  A     A  VR  M+E  ++KEPG SWI+ GD+++ F
Sbjct: 663 QKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSF 722

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           ++GD SH+ S Q++  L+ +    ++     D   +L    E E  T +  HSEKLA+AF
Sbjct: 723 VSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD---ILGYKIEHEHLTNVNYHSEKLAVAF 779

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+L       +RV KNLR+C DCH   K  S +E RE+I+RD  RFHHFK+G+CSCGDYW
Sbjct: 780 GVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  + EM    I+P  F + ++LKA   ++D    KQ+HA + K G  LS   + + L
Sbjct: 352 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL-LSDEYIGSIL 410

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +++Y   GS M D    F+ I     V   +MI    + G+++ AL  F  +L    +P 
Sbjct: 411 IDLYSVLGS-MMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPD 469

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            F   ++  +C+N+     LR G Q+ G++ +VG    T   N+ + MYAK G +  A  
Sbjct: 470 EFIXSTIMSSCANMGM---LRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 526

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            F+  E+ D+VSW+T++ S +Q+   +EA+ F   M   GI+P+  +   VL ACSH  +
Sbjct: 527 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 586

Query: 299 LDTG 302
           ++ G
Sbjct: 587 VEEG 590



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 5/149 (3%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++ +F  A+  + E+   + +PD F    ++ + A +  L  G+QI  H  K   G+S  
Sbjct: 447 QNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATK--VGISRF 504

Query: 114 TV-ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           T+  N+ + MY K G D++     F ++   D VSW++MI +  + G    AL  F +M 
Sbjct: 505 TIFQNSQIWMYAKSG-DLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMK 563

Query: 173 YSNVEPSSFTLVSVALACSNLSR-RDGLR 200
              +EP+ F  + V +ACS+     +GLR
Sbjct: 564 SCGIEPNHFAFLGVLIACSHRGLVEEGLR 592


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/726 (34%), Positives = 386/726 (53%), Gaps = 79/726 (10%)

Query: 223 LMAMYAKLGRVDDAKTLF--KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           L+A ++  G  + A+ +F       RD V +N +++  S N+    A+   R +   G +
Sbjct: 87  LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146

Query: 281 PDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGS---ALVDMYCNCR--- 333
           PD  +  SVL A + + E     ++IH   +++     + FV S   AL+ ++  C    
Sbjct: 147 PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSG----SGFVTSVLNALLSVFVKCASSP 202

Query: 334 -------------------------------------EVECGRRVFDFISDKKIALWNAM 356
                                                E++  R+  D +++K +  WNAM
Sbjct: 203 LVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAM 262

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL- 415
           I+GY  + +  EAL +F KM  +   W +  T +SV+ AC  +  F   + +H + ++  
Sbjct: 263 ISGYVHHGFFLEALEMFRKMYLLGIQW-DEFTYTSVLSACANAGFFLHGKQVHAYILRTE 321

Query: 416 ---GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
               L     V NAL  +Y + G+++ ++ +F+ M V+D VSWN +++GY   G+  +A 
Sbjct: 322 PRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAK 381

Query: 473 MLLREM----------------QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
               EM                QN   E++      +       +P        +  C  
Sbjct: 382 SFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGF--EPCDYAFAGAIIACAW 439

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L+AL  G+++HA  +R    + +  G+AL+ MYAKCG +  A  +F  MP  + ++WN +
Sbjct: 440 LAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAM 499

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I A G HG G + LEL + M+ E     ++ P+ +TF+ + + CSH+G+V EG   F  M
Sbjct: 500 IAALGQHGHGAQALELFELMLKE-----DILPDRITFLTVLSTCSHAGLVEEGHRYFKSM 554

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              YGI P  DHYA ++DLL RAGK  +A  +I  MP E      W +LL  CRIH N++
Sbjct: 555 SGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVE-PGPPIWEALLAGCRIHGNMD 613

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +G  AA+ LF L P     YVLLSN+Y++   WD    VRK M++ GV+KEPGCSWIE  
Sbjct: 614 LGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVE 673

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           +++H FL  D  H + + ++ +LE L  +MRK GY+PDT  VLH++  E+KE +L  HSE
Sbjct: 674 NKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSE 733

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+ FG+L  P G T+RV KNLR+C DCH A KF+SK+  REI++RD +RFHHFKNG C
Sbjct: 734 KLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGEC 793

Query: 877 SCGDYW 882
           SCG+YW
Sbjct: 794 SCGNYW 799



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 229/524 (43%), Gaps = 106/524 (20%)

Query: 33  PLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-Q 91
           PL    T C  + I      + +N    AI  + ++ R+  +PDNF F +VL A+A I +
Sbjct: 108 PLGIRDTVCYNAMITGY---SHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVE 164

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD--------MWDVYKVFDRITEK 143
           D    +QIH  VVK G G  + +V N L++++ KC S         M    K+FD +TE+
Sbjct: 165 DEKQCQQIHCAVVKSGSGFVT-SVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTER 223

Query: 144 DQVSWNSMIATLCRFGKWDLA-------------------------------LEAFRMML 172
           D++SW +MIA   R G+ D A                               LE FR M 
Sbjct: 224 DELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMY 283

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRL-GRQVHG------------------NSLRVG 213
              ++   FT  SV  AC+N     G  L G+QVH                   N+L   
Sbjct: 284 LLGIQWDEFTYTSVLSACAN----AGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATL 339

Query: 214 EW------------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
            W                  +    NA+++ Y   GR+D+AK+ F+   +R+L++W  ++
Sbjct: 340 YWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMI 399

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S L+QN    E++    +M   G +P   + A  + AC+ L  L  G+++HA  +R  + 
Sbjct: 400 SGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR--LG 457

Query: 316 IDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            D+S   G+AL+ MY  C  VE    +F  +       WNAMI   GQ+ +  +AL LF 
Sbjct: 458 FDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFE 517

Query: 375 KMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
            M +   + P+  T  +V+  C  +         F    G++G    +  G D Y +  +
Sbjct: 518 LMLK-EDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYG----ICPGEDHYAR--M 570

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
           +D+  R G+   +K + + M V      W  ++ G   C  HG+
Sbjct: 571 IDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAG---CRIHGN 611



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 246/604 (40%), Gaps = 138/604 (22%)

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
           S+ + +HAH++  G+      + N L+++Y K  SD+   + +FD I + D V+  ++IA
Sbjct: 32  SIARTVHAHMIASGFKPRGY-ILNRLIDVYCK-SSDLVSAHHLFDEIRQPDIVARTTLIA 89

Query: 154 TLCRFGKWDLA---------------------------------LEAFRMMLYSNVEPSS 180
                G  +LA                                 +E FR +L +   P +
Sbjct: 90  AHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDN 149

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKL--------- 230
           FT  SV  A + +   +  +  +Q+H   ++ G  + T ++NAL++++ K          
Sbjct: 150 FTFTSVLGALALIVEDE--KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207

Query: 231 -------------------------------GRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
                                          G +D A+       ++ +V+WN ++S   
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYV 267

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
            +  FLEA+   R+M L GI+ D  +  SVL AC++      GK++HAY LR +      
Sbjct: 268 HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLD 327

Query: 320 F---VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY---------------- 360
           F   V +AL  +Y  C +V+  R+VF+ +  K +  WNA+++GY                
Sbjct: 328 FSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEM 387

Query: 361 ---------------GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                           QN + EE+L LF +M+   G  P     +  + AC    A    
Sbjct: 388 PERNLLTWTVMISGLAQNGFGEESLKLFNRMKS-EGFEPCDYAFAGAIIACAWLAALMHG 446

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H   ++LG        NAL+ MY++ G +E +  +F  M   D+VSWN MI      
Sbjct: 447 RQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAAL--- 503

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQHG     L   + M           L E +L   P+ IT +TVL  C     + +G  
Sbjct: 504 GQHGHGAQALELFELM-----------LKEDIL---PDRITFLTVLSTCSHAGLVEEG-- 547

Query: 526 IHAYAIRNMLATDVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
            H Y         +  G    + ++D+  + G  + A+ + + MPV      W  ++   
Sbjct: 548 -HRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGC 606

Query: 581 GMHG 584
            +HG
Sbjct: 607 RIHG 610



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 132/441 (29%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME------------------- 448
           +H H I  G     Y+ N L+D+Y +   +  +  +FD++                    
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 449 --------------VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
                         +RDTV +N MITGY+       A+ L R++        RN      
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLL-------RNGF---- 145

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKG----KEIHAYAIRNMLATDVVVGSALVDMYA 550
                 +P++ T  +VL   GAL+ + +     ++IH   +++       V +AL+ ++ 
Sbjct: 146 ------RPDNFTFTSVL---GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFV 196

Query: 551 KC----------------------------------------GCLNFARRVFDLMPVRNV 570
           KC                                        G L+ AR+  D M  + V
Sbjct: 197 KCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLV 256

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN +I  Y  HG   E LE+ + M   G     ++ +E T+ ++ +AC+++G    G 
Sbjct: 257 VAWNAMISGYVHHGFFLEALEMFRKMYLLG-----IQWDEFTYTSVLSACANAGFFLHGK 311

Query: 631 DLF-YKMKDDYGIEPSPDHYACVVDLLG----RAGKVEDAYQLINMMPPEFDKAGAWSSL 685
            +  Y ++ +    PS D    V + L     + GKV++A Q+ N MP +     +W+++
Sbjct: 312 QVHAYILRTE--PRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK--DLVSWNAI 367

Query: 686 LGACRIHQNVEIGEI-AAQNLF--LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
           L        V  G I  A++ F  + E ++ +  V++S +  +    ++++ +  +MK  
Sbjct: 368 LSG-----YVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNG-FGEESLKLFNRMKSE 421

Query: 743 GVRKEP----------GCSWI 753
           G   EP           C+W+
Sbjct: 422 GF--EPCDYAFAGAIIACAWL 440


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/847 (32%), Positives = 466/847 (55%), Gaps = 86/847 (10%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTR----CKESWIESLRSEARS- 55
           MASSA  L      PLS   +H P  T +T+  +P  + R    C+E  +   R    + 
Sbjct: 1   MASSATPL------PLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDAL 54

Query: 56  -----------------NQF-REAILSYIEMTRS--DIQPDNFAFPAVLKAVAGIQDLSL 95
                            N F  EA+L Y  M  S   ++ D++ + +VLKA A  ++L +
Sbjct: 55  PRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVV 114

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD------------VYKVFDRITEK 143
           GK +HAH ++     S + V N+L+NMY  C S   D            V KVFD + ++
Sbjct: 115 GKAVHAHFLRCLMNPSRI-VYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKR 173

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             V+WN++IA   R  ++  A++ F MM+   ++PS  + V+V  A S+L      +   
Sbjct: 174 TVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLG---DFKNAN 230

Query: 204 QVHGNSLRVG-EW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            VHG  +++G E+  + +++++ + MYA+LG ++ AK +F +  +R+   WNT++S+  Q
Sbjct: 231 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQ 290

Query: 261 NDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           N+  LE + +F + +       D V++ S + A SHL+  +  +++HA+ ++N + +   
Sbjct: 291 NNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN-VAVTQV 349

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            V +AL+ MY  C  ++   ++FD + +K +  WN MI+ + QN  ++EALMLF +M++ 
Sbjct: 350 CVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK- 408

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGR 436
             L  ++ T+++++ A          +  HG+ ++ G+   G D Y    L+DMY++ G 
Sbjct: 409 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY----LIDMYAKSGL 464

Query: 437 IEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           IE ++ +F+      RD  +WN+M++GYT  G    A ++LR+M              LD
Sbjct: 465 IEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQM--------------LD 510

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           + V+   PN +TL ++LP C     +  GK++H ++IRN L  +V V +AL+DMY+K G 
Sbjct: 511 QKVM---PNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGS 567

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A  VF     ++++T++ +I+ YG HG G+  L +   M   G     ++P+ VT +
Sbjct: 568 IAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG-----IQPDAVTLV 622

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A+ +ACS++G+V EG+ +F  M+  Y I+PS +H+ CV D+LGRAG+V+ AY+ +  +  
Sbjct: 623 AVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGE 682

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKA 732
           + +    W SLL ACRIH+  E+G++ A+ L  +E       ++VLLSNIY+  + W+  
Sbjct: 683 KGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENV 742

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             VRK+M+E G++KE G SWIE    ++ F + D  H QS+Q++  LE L   M+  GY 
Sbjct: 743 DIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYR 802

Query: 793 PDTSCVL 799
           P ++  L
Sbjct: 803 PLSTSYL 809


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/649 (37%), Positives = 366/649 (56%), Gaps = 72/649 (11%)

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           Q+  R  KP      ++L  C     L  GK++HA+   +  +    ++ + L+DMY  C
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSI--GLYISNRLLDMYAKC 166

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS-- 390
             +    +VFD +  + +  WN MI+GY +    E+A  LF KM       PN    S  
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM-------PNRDNFSWT 219

Query: 391 SVVPACVRSEAFPDK-------------------------------------EGIHGHAI 413
           +++  CV+    P++                                     + IHGH +
Sbjct: 220 AIISGCVQHNR-PEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIM 278

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           ++GL  D  V  +L+DMY + G IE ++ IFD ME RD VSW TMI  Y   G+  +   
Sbjct: 279 RMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFA 338

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L R + N       +N+           PN  T   VL  C  L+A   GK+IHAY +R 
Sbjct: 339 LFRHLMN-------SNIM----------PNDFTFAGVLNACADLAAEDLGKQIHAYMVRV 381

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
              +     SALV MY+KCG +  A+ VF+++P  ++ +W  +++ Y  HG+  + L   
Sbjct: 382 GFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF 441

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           + ++  G+     KP+ + FI + +AC+H+G+V +G++ F+ +K+ +G+  + DHYAC++
Sbjct: 442 ELLLKSGT-----KPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACII 496

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLL RAG+  +A  +IN MP + DK   W++LLG CRIH N+E+ + AA++LF +EP+  
Sbjct: 497 DLLARAGQFTEAESIINEMPIKPDKY-IWAALLGGCRIHGNLELAKRAAKSLFEIEPENP 555

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
           + YV L+NIY+SA +  +  ++R+ M   G+ K+PG SWIE   E+H F  GD SH +S+
Sbjct: 556 ATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSK 615

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           ++  +L  LS+RM++ GYVPDT+ VLH+V  E+KE  L  HSEKLA+AFGI++TP GT I
Sbjct: 616 EILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPI 675

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +V KNLR C DCH A KFIS I  R+II+RD  RFH F+ G+CSC DYW
Sbjct: 676 KVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 219/453 (48%), Gaps = 52/453 (11%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           +P    +  +LK     + L  GKQ+HAH+   G     + ++N L++MY KCGS + D 
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGS--IGLYISNRLLDMYAKCGS-LVDA 172

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            KVFD +  +D  SWN MI+   + G ++ A   F  M        +F+  ++   C   
Sbjct: 173 EKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM----PNRDNFSWTAIISGCVQH 228

Query: 194 SRRD---------------------------------GLRLGRQVHGNSLRVG-EWNTFI 219
           +R +                                  L +G+++HG+ +R+G + +  +
Sbjct: 229 NRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVV 288

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             +L+ MY K G +++A+ +F   E+RD+VSW T++ +  +N +  E     R +    I
Sbjct: 289 WCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNI 348

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN-SFVGSALVDMYCNCREVECG 338
            P+  + A VL AC+ L   D GK+IHAY +R  +  D+ S   SALV MY  C ++E  
Sbjct: 349 MPNDFTFAGVLNACADLAAEDLGKQIHAYMVR--VGFDSFSSAASALVHMYSKCGDIENA 406

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           + VF+ +    +  W +++ GY Q+   ++AL  F ++   +G  P+      V+ AC  
Sbjct: 407 KSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF-ELLLKSGTKPDGIAFIGVLSACAH 465

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
           +    DK   + H+IK   G  R + +   ++D+ +R G+   +++I ++M ++ D   W
Sbjct: 466 A-GLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIW 524

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
             ++ G   C  HG+  +  R  +++ E +  N
Sbjct: 525 AALLGG---CRIHGNLELAKRAAKSLFEIEPEN 554



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 223/517 (43%), Gaps = 77/517 (14%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKL 230
           +LY   +P +   +++   C  L +R  L+ G+QVH +    G    +I N L+ MYAK 
Sbjct: 110 LLYRIEKPYASIYLTLLKFC--LKQR-ALKEGKQVHAHIKTSGSIGLYISNRLLDMYAKC 166

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G + DA+ +F     RDL SWN ++S   +   F +A     +M  R    D  S  +++
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAII 222

Query: 291 PACSH-------LEM-----------------------------LDTGKEIHAYALRNDI 314
             C         LE+                             L  GK+IH + +R   
Sbjct: 223 SGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG- 281

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L  +  V  +L+DMY  C  +E  R +FD + ++ +  W  MI  Y +N   EE   LF 
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            +   + + PN  T + V+ AC    A    + IH + +++G        +AL+ MYS+ 
Sbjct: 342 HLMN-SNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKC 400

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G IE +K++F+ +   D  SW +++ GY   GQH  AL                      
Sbjct: 401 GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF------------------- 441

Query: 495 ETVLRP--KPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAK 551
           E +L+   KP+ I  + VL  C     + KG E  H+   ++ L   +   + ++D+ A+
Sbjct: 442 ELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLAR 501

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-N 609
            G    A  + + MP++ +   W  ++    +HG     LEL K          E++P N
Sbjct: 502 AGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN----LELAKRAAKSLF---EIEPEN 554

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
             T++ L    + +GM +E  ++   M D  GI   P
Sbjct: 555 PATYVTLANIYASAGMRAEEANIRETM-DSRGIVKKP 590



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 150/264 (56%), Gaps = 9/264 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDN-FAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +    + N+  EA+  Y  M + D    N     + L A A I  L +GK+IH H
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +++ G   S   V  +L++MYGKCGS + +   +FD++ E+D VSW +MI T  + G+ +
Sbjct: 277 IMRMGLD-SDEVVWCSLLDMYGKCGS-IEEARYIFDKMEERDVVSWTTMIHTYLKNGRRE 334

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IM 220
                FR ++ SN+ P+ FT   V  AC++L+  D   LG+Q+H   +RVG +++F    
Sbjct: 335 EGFALFRHLMNSNIMPNDFTFAGVLNACADLAAED---LGKQIHAYMVRVG-FDSFSSAA 390

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           +AL+ MY+K G +++AK++F+     DL SW +++   +Q+ +  +A+ F   +   G K
Sbjct: 391 SALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTK 450

Query: 281 PDGVSIASVLPACSHLEMLDTGKE 304
           PDG++   VL AC+H  ++D G E
Sbjct: 451 PDGIAFIGVLSACAHAGLVDKGLE 474


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/798 (33%), Positives = 430/798 (53%), Gaps = 44/798 (5%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  G++IH  V++ GYG   + ++N L++MY +  S   D   + DR+  ++ VSWN++I
Sbjct: 28  LDQGRKIHRRVIESGYG-DHLFLSNHLLHMYARLESSR-DAELLLDRMPRRNAVSWNAVI 85

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
               + G +  +L  F+ ML     P +   +S+  A   +        G  V   + + 
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE------GEIVQDFAKKS 139

Query: 213 GEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   +F++  AL+ MY + GR+D AK  F   ++R +VSWN +++  S+ D+  +++   
Sbjct: 140 GFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVF 199

Query: 272 RQMALRGIKPDGVSIASVLPACSHL--EMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           R+M L+GI P+ V+I  +  A + +  ++   G  IHA ++ +  LI  + V +++++++
Sbjct: 200 REMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSI-DSGLISVTTVANSIINLF 258

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                +     +F+ +  + +  WN MI  + +N +  EAL L+ +M     + P+  T 
Sbjct: 259 GRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT----IRPDGVTF 314

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
            +V+ AC   +     E IH  A   G   D  V  AL+ MY R GR++ +  +F  ++ 
Sbjct: 315 VNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQH 374

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
              ++ N +I  +   G+   +L+  R+M                   L  +P+  TL+ 
Sbjct: 375 PGVITLNAIIAAHAQFGRADGSLLHFRQMLQ-----------------LGIRPSKFTLVA 417

Query: 510 VLPGCGALSALAKG-KEIHAYAIR---NMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           VL  C    A A   +++H +      +    D++V +ALV+MYAKCG L+ AR +FD  
Sbjct: 418 VLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAA 477

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  NV TWN I+  Y  HG     + LL  M   G     + P+ ++F A  +A SH+  
Sbjct: 478 PQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAG-----ISPDPISFTAALSASSHARQ 532

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V +G  +FY +  DYG+ PS +HY  VVDLLGRAG +E+A   +  M    D A    +L
Sbjct: 533 VEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAW-MAL 591

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACRIH++ +    AA+ +  ++P   + Y +LSN+YS+A  WD+A ++R++M E G R
Sbjct: 592 LGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGAR 651

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR-KEGYVPDTSCVLHNVNE 804
           KEPG SWIE  + +H+F   D SH ++ +++  L+ L   ++ +E YVPD   VLH+V +
Sbjct: 652 KEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVED 711

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           E +E LL  HSEKLA+ FG++ T  G+ I + KNLR+C DCH   K  SK   REI++RD
Sbjct: 712 EHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRD 771

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHF  G CSC D W
Sbjct: 772 CYRFHHFNGGACSCSDCW 789



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 257/531 (48%), Gaps = 54/531 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +R+ A++  F  ++L +  M +    PD   F +++KA   IQ+   G+ +    
Sbjct: 80  SWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE---GEIVQDFA 136

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  S V V   L+ MYG+CG  +      FDRI E+  VSWN++I    R  + + 
Sbjct: 137 KKSGFDRSFV-VGTALIGMYGRCGR-LDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQ 194

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           +L  FR ML   + P++ T++ +A A + ++ +     G  +H  S+  G  + T + N+
Sbjct: 195 SLRVFREMLLQGIAPNAVTIICIASAVAGIAAKI-TTCGNLIHACSIDSGLISVTTVANS 253

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ ++ + G +  A  +F+  + RD+ SWNT++++ ++N    EA+    +M +R   PD
Sbjct: 254 IINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIR---PD 310

Query: 283 GVSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           GV+  +VL AC   + L+ G+ IH    A+   +D++     V +ALV MY  C  ++  
Sbjct: 311 GVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLI-----VATALVSMYRRCGRLDRA 365

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  I    +   NA+I  + Q    + +L+ F +M ++ G+ P+  T+ +V+ AC  
Sbjct: 366 AEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQL-GIRPSKFTLVAVLGACAT 424

Query: 399 SEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           S A           +    G     D  V+NAL++MY++ G ++ ++ IFD     +  +
Sbjct: 425 SGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVST 484

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN ++ GY    QHG A M +R +            Y++    + P P S T        
Sbjct: 485 WNAIMAGYA---QHGYADMAVRLL------------YEMQLAGISPDPISFT-------- 521

Query: 515 GALSALAKGKEIHA-----YAIRN--MLATDVVVGSALVDMYAKCGCLNFA 558
            ALSA +  +++       YAI     L   V    A+VD+  + G L  A
Sbjct: 522 AALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEA 572



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 9/148 (6%)

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           ++L +G++IH   I +     + + + L+ MYA+      A  + D MP RN ++WN +I
Sbjct: 26  TSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVI 85

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            A    G+    L   + M+ +GS      P+ V F++L  A    G + EG ++     
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGS-----VPDAVVFLSLIKA---PGTIQEG-EIVQDFA 136

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDA 665
              G + S      ++ + GR G+++ A
Sbjct: 137 KKSGFDRSFVVGTALIGMYGRCGRLDRA 164


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/632 (38%), Positives = 363/632 (57%), Gaps = 43/632 (6%)

Query: 285 SIASVLPACSHLEMLDTG------KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           S+   LP   HL +  T       +++HA++L+  I  ++ FV S L+ +Y + +  + G
Sbjct: 9   SLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIF-NHPFVSSRLLALYSDPKINDLG 67

Query: 339 --RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +FD I  + +  WN +I  Y +N++  + ++LF   E V    P+  T+  V+  C
Sbjct: 68  YARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLF--HELVHEYLPDNFTLPCVIKGC 125

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV--- 453
            R     + + IHG A+K+G G D +VQ +L++MYS+ G I+ ++ +FD M  +D V   
Sbjct: 126 ARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWN 185

Query: 454 --------SWNTMITGYTICGQHGDALMLLREMQ-------NMEEEKNRNNVYDLDETV- 497
                   SWN MI GY   G    AL L  +M        N+       N   +D    
Sbjct: 186 SLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKM 245

Query: 498 ------LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                 L  +P+  TL++VL     L+ L KG+ IH+Y  +N    D ++G++L++MYAK
Sbjct: 246 FFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAK 305

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CGC+  A  VF  +  + V  W  II+  G+HG     L L   M   G     +KPN +
Sbjct: 306 CGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTG-----LKPNAI 360

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
            FI +  AC+H+G+V +G   F  M ++Y IEP+ +HY C+VD+L RAG +E+A   I  
Sbjct: 361 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
           MP   +K   W SLLG  R H  ++IGE AAQ +  + P+    Y+LLSN+Y+++ +W+K
Sbjct: 421 MPISPNKV-IWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEK 479

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              VR+ M + G RK+PGCS +E    +H+F+ GD SH Q+++++  +  + E+++  G+
Sbjct: 480 VSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGH 539

Query: 792 VPDTSCVLHNV-NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           VPDT+ VL  +  E+EKE  L  HSE+LAIAFG++N  PG  IR+ KNLRVCNDCH  TK
Sbjct: 540 VPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTK 599

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +SKI SREII+RD  RFHHFKNG+CSC DYW
Sbjct: 600 LLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 191/432 (44%), Gaps = 73/432 (16%)

Query: 204 QVHGNSLRVGEWN-TFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           Q+H  SL+   +N  F+ + L+A+Y+  K+  +  A+++F   + R L+ WNTI+    +
Sbjct: 34  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 93

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N    + ++   ++    + PD  ++  V+  C+ L ++  GK+IH  AL+     D  F
Sbjct: 94  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD-VF 151

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIAL-----------WNAMITGYGQNEYDEEA 369
           V  +LV+MY  C E++C R+VFD + DK + L           WNAMI GY ++   + A
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSA 211

Query: 370 LMLFIKME--------------EVAGLW----------------PNATTMSSVVPACVRS 399
           L LF +M               E+ G +                P+  T+ SV+ A    
Sbjct: 212 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 271

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                   IH +  K G   D  +  +L++MY++ G IE + T+F  ++ +    W  +I
Sbjct: 272 AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 331

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            G  I G    AL L  EM                +T L  KPN+I  + VL  C     
Sbjct: 332 VGLGIHGMANHALALFLEMC---------------KTGL--KPNAIIFIGVLNACNHAGL 374

Query: 520 LAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITW 573
           +  G++     ++ Y I   L         LVD+  + G L  A+   + MP+  N + W
Sbjct: 375 VDDGRQYFDMMMNEYKIEPTLEHY----GCLVDILCRAGHLEEAKNTIENMPISPNKVIW 430

Query: 574 NVIIMAYGMHGE 585
             ++     HG+
Sbjct: 431 MSLLGGSRNHGK 442



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 57/413 (13%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SDMWDVYKVFDRITEKDQVSWNSMIATL 155
           +Q+HA  +K     +   V++ L+ +Y     +D+     +FDRI  +  + WN++I   
Sbjct: 33  EQLHAFSLKTAI-FNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 91

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                    +  F  +++  + P +FTL  V   C+ L     ++ G+Q+HG +L++G  
Sbjct: 92  VENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGV---VQEGKQIHGLALKIGFG 147

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI-------------------- 254
            + F+  +L+ MY+K G +D A+ +F    D+D+V WN++                    
Sbjct: 148 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGD 207

Query: 255 ----------------------VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
                                 ++    N +F++AV     M   G +P   ++ SVL A
Sbjct: 208 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 267

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
            S L +L  G+ IH+Y  +N   +D   +G++L++MY  C  +E    VF  I  KK+  
Sbjct: 268 VSGLAVLGKGRWIHSYMEKNGFELD-GILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 326

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE---GIH 409
           W A+I G G +     AL LF++M +  GL PNA     V+ AC  +    D      + 
Sbjct: 327 WTAIIVGLGIHGMANHALALFLEMCK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 385

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            +  K+    + Y    L+D+  R G +E +K   ++M +  + V W +++ G
Sbjct: 386 MNEYKIEPTLEHY--GCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 436



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 55/351 (15%)

Query: 56  NQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           NQF  + I+ + E+    + PDNF  P V+K  A +  +  GKQIH   +K G+G S V 
Sbjct: 94  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG-SDVF 151

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKD-----------QVSWNSMIATLCRFGKWDL 163
           V  +LVNMY KCG ++    KVFD + +KD            VSWN+MI    + G +D 
Sbjct: 152 VQGSLVNMYSKCG-EIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDS 210

Query: 164 ALEAFR-------------------------------MMLYSNVEPSSFTLVSVALACSN 192
           ALE F                                MML     PS  TLVSV  A S 
Sbjct: 211 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 270

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L+    L  GR +H    + G E +  +  +L+ MYAK G ++ A T+F++ + + +  W
Sbjct: 271 LAV---LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 327

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             I+  L  +     A+    +M   G+KP+ +    VL AC+H  ++D G++ +   + 
Sbjct: 328 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ-YFDMMM 386

Query: 312 NDILIDNSFVG-SALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITG 359
           N+  I+ +      LVD+ C    +E  +   +   IS  K+ +W +++ G
Sbjct: 387 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV-IWMSLLGG 436



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +     + QF +A+  +  M +   +P +    +VL AV+G+  L  G+ IH+++
Sbjct: 225 TWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYM 284

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+ L  + +  +L+ MY KCG  +     VF  I +K    W ++I  L   G  + 
Sbjct: 285 EKNGFELDGI-LGTSLIEMYAKCGC-IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANH 342

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           AL  F  M  + ++P++   + V  AC++    D    GRQ
Sbjct: 343 ALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD---GRQ 380


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/559 (41%), Positives = 333/559 (59%), Gaps = 32/559 (5%)

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           ++    +  WN++I    ++    EAL  F  M +++ L PN +T    + +C       
Sbjct: 35  YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSALLDLH 93

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
                H  A+  G   D +V +AL+DMYS+ G +  ++T+FD++  R+ VSW +MITGY 
Sbjct: 94  SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 464 ICGQHGDALMLLREMQNMEEEK-----------NRNNVYDLDETVLRP-------KPNSI 505
              Q+ DA   LR    M E              +N +      +            N++
Sbjct: 154 ---QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           TL  VL  C    +   GK IH   I+  L ++V VG++++DMY KCG +  AR+ FD M
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             +NV +W+ ++  YGMHG  +E LE+   M   G     VKPN +TF+++ AACSH+G+
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG-----VKPNYITFVSVLAACSHAGL 325

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDKAGAWS 683
           + EG   F  M  ++ +EP  +HY C+VDLLGRAG +++A+ LI  M   P+F     W 
Sbjct: 326 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDF---VVWG 382

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           +LLGACR+H+NV++GEI+A+ LF L+P    +YVLLSNIY+ A  W+    +R  MK  G
Sbjct: 383 ALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSG 442

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           + K PG S ++    +H FL GD  H Q E+++ +LE LS ++++ GYVPD + VLH+V 
Sbjct: 443 LVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVG 502

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
            EEKE +L  HSEKLA+AFGI+NT PGTTI + KNLRVC DCH A KFISKI  REI++R
Sbjct: 503 HEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVR 562

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D +RFHHF++G CSCGDYW
Sbjct: 563 DSKRFHHFRDGLCSCGDYW 581



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 186/380 (48%), Gaps = 60/380 (15%)

Query: 131 WDVYK-----------VFDRITEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           W +Y+           +F++  +K  V SWNS+IA L R G    AL AF  M   +++P
Sbjct: 15  WKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKP 74

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           +  T      +CS L     L  GRQ H  +L  G E + F+ +AL+ MY+K G + DA+
Sbjct: 75  NRSTFPCAIKSCSALL---DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 131

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG------------------- 278
           TLF     R++VSW ++++   QND    A+     MA R                    
Sbjct: 132 TLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTE 191

Query: 279 -------------IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
                        I  + V++++VL AC+H      GK IH   ++   L  N FVG+++
Sbjct: 192 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG-LESNVFVGTSI 250

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +DMYC C +VE  R+ FD + +K +  W+AM+ GYG + + +EAL +F +M  +AG+ PN
Sbjct: 251 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM-NMAGVKPN 309

Query: 386 ATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
             T  SV+ AC  S A   +EG H      H   +  G + Y    ++D+  R G ++ +
Sbjct: 310 YITFVSVLAAC--SHAGLLEEGWHWFKAMSHEFDVEPGVEHY--GCMVDLLGRAGYLKEA 365

Query: 441 KTIFDDMEVR-DTVSWNTMI 459
             +   M++R D V W  ++
Sbjct: 366 FDLIKGMKLRPDFVVWGALL 385



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 52/380 (13%)

Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           TLF  + D+ ++ SWN++++ L+++   +EA+     M    +KP+  +    + +CS L
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR----------------- 339
             L +G++ H  AL      D  FV SALVDMY  C E+   R                 
Sbjct: 90  LDLHSGRQAHQQALIFGFEPD-LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 148

Query: 340 --------------RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
                         RVFD ++++ +  WN++I  Y QN    E++ +F +M +   +  N
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           A T+S+V+ AC  S +    + IH   IK+GL  + +V  +++DMY + G++E+++  FD
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            M  ++  SW+ M+ GY + G   +AL +  EM NM                   KPN I
Sbjct: 269 RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM-NMAG----------------VKPNYI 311

Query: 506 TLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           T ++VL  C     L +G     A +    +   V     +VD+  + G L  A  +   
Sbjct: 312 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 371

Query: 565 MPVR-NVITWNVIIMAYGMH 583
           M +R + + W  ++ A  MH
Sbjct: 372 MKLRPDFVVWGALLGACRMH 391



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 147/291 (50%), Gaps = 36/291 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ARS    EA+ ++  M +  ++P+   FP  +K+ + + DL  G+Q H   
Sbjct: 43  SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS------------------------------DMWDV 133
           + +G+    + V++ LV+MY KCG                               D    
Sbjct: 103 LIFGFE-PDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRA 161

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSN 192
            +VFD + E+D +SWNS+IA   + G    ++E F RM+    +  ++ TL +V LAC++
Sbjct: 162 LRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 221

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
              +   RLG+ +H   +++G E N F+  +++ MY K G+V+ A+  F    ++++ SW
Sbjct: 222 SGSQ---RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           + +V+    +    EA+    +M + G+KP+ ++  SVL ACSH  +L+ G
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 125/286 (43%), Gaps = 62/286 (21%)

Query: 442 TIFDD-MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           T+F+  ++  +  SWN++I       + GD++  LR   +M +              L  
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAE---LARSGDSVEALRAFSSMRK--------------LSL 72

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR- 559
           KPN  T    +  C AL  L  G++ H  A+      D+ V SALVDMY+KCG L  AR 
Sbjct: 73  KPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDART 132

Query: 560 ------------------------------RVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
                                         RVFD M  R+VI+WN II  Y  +G   E 
Sbjct: 133 LFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTES 192

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM---DLFYKMKDDYGIEPSP 646
           +E+   MV +    GE+  N VT  A+  AC+HSG    G    D   KM    G+E + 
Sbjct: 193 MEIFHRMVKD----GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM----GLESNV 244

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
                ++D+  + GKVE A +  + M  +  K  +WS+++    +H
Sbjct: 245 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVK--SWSAMVAGYGMH 288


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/714 (35%), Positives = 394/714 (55%), Gaps = 64/714 (8%)

Query: 203 RQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDD---AKTLFKSFEDRDLVSWNTIVSSL 258
           R +H   ++ G  NT + ++ L+         D    A ++F + ++ +L+ WNT+    
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           + +   + A+     M   G+ PD  +   +L +C+  ++   G++IH + L+    +D 
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD- 123

Query: 319 SFVGSALVDMYCNCREVECGRRVFDF-------------------------------ISD 347
            +V ++L+ MY     +E  R+VFD                                I  
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           K +  WNAMI+GY +    +EAL LF +M  +  + P+ +TM +VV AC +S++      
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H      G   +  + NAL+D+YS+ G +E +  +FD +  +D +SWNT+I GYT    
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
           + +AL+L +EM    E                  PN +T++++LP C  L A+  G+ IH
Sbjct: 304 YKEALLLFQEMLRSGE-----------------TPNDVTMLSILPACAHLGAIDIGRWIH 346

Query: 528 AYAIRNMLATDVVVGS---ALVDMYAKCGCLNFARRVFDL-MPVRNVITWNVIIMAYGMH 583
            Y  + +      V S   +L+DMYAKCG ++ A++VFD  M  R++ TWN +I  + MH
Sbjct: 347 VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G      ++   M   G     ++P+++TF+ L +ACSHSGM+  G ++F  M   Y I 
Sbjct: 407 GRANAAFDIFSRMRMNG-----IEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEIT 461

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P  +HY C++DLLG +G  ++A ++IN MP E D    W SLL AC+IH N+E+GE  A+
Sbjct: 462 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGV-IWCSLLKACKIHGNLELGESFAK 520

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE-PGCSWIEFGDEIHKF 762
            L  +EP  +  YVLLSNIY++A  W++   +R  + + G++K+ PGCS IE    +H+F
Sbjct: 521 KLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEF 580

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           + GD  H Q+ +++G LE +   + + G+VPDTS VL  + EE +E  L  HSEKLAIAF
Sbjct: 581 IIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAF 640

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           G+++T PGT + + KNLRVC +CH+ATK ISKI  REII RD  RF HF++G C
Sbjct: 641 GLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 207/390 (53%), Gaps = 40/390 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    R  A S+    A+  Y+ M    + PD++ FP +LK+ A  +    G+QIH HV+
Sbjct: 57  WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVL 116

Query: 105 KYGYGLSSVTVANTLVNMYGKCG--SDMWDVY---------------------------- 134
           K G+ L  + V  +L++MY + G   D   V+                            
Sbjct: 117 KLGFDLD-IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQ 175

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR-MMLYSNVEPSSFTLVSVALACSNL 193
           K+FD I  KD VSWN+MI+     G +  ALE F+ MM+ +NV P   T+V+V  AC   
Sbjct: 176 KLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC--- 232

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           ++ D + LGR VH      G   N  I+NAL+ +Y+K G V+ A  LF    ++D++SWN
Sbjct: 233 AQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWN 292

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR- 311
           T++   +  + + EA++  ++M   G  P+ V++ S+LPAC+HL  +D G+ IH Y  + 
Sbjct: 293 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKK 352

Query: 312 -NDILIDNSFVGSALVDMYCNCREVECGRRVFD-FISDKKIALWNAMITGYGQNEYDEEA 369
              ++ + S + ++L+DMY  C +++  ++VFD  +S++ ++ WNAMI+G+  +     A
Sbjct: 353 LKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             +F +M  + G+ P+  T   ++ AC  S
Sbjct: 413 FDIFSRM-RMNGIEPDDITFVGLLSACSHS 441



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 233/488 (47%), Gaps = 61/488 (12%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VFD I E + + WN+M            AL+ + +M+   + P S+T   +  +C+    
Sbjct: 45  VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-------------- 240
           R   + G+Q+HG+ L++G + + ++  +L++MYA+ GR++DA+ +F              
Sbjct: 105 R---KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161

Query: 241 --------------KSFED---RDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPD 282
                         K F++   +D+VSWN ++S   +   + EA+ +F   M +  ++PD
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++ +V+ AC+  + ++ G+ +H++ + +     N  + +AL+D+Y    EVE    +F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSW-INDHGFASNLKIVNALIDLYSKFGEVETACELF 280

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D + +K +  WN +I GY      +EAL+LF +M   +G  PN  TM S++PAC    A 
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAI 339

Query: 403 PDKEGIHGH---AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD-DMEVRDTVSWNTM 458
                IH +    +K  +     +Q +L+DMY++ G I+ ++ +FD  M  R   +WN M
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+G+ + G+   A  +   M+        N +          +P+ IT + +L  C    
Sbjct: 400 ISGFAMHGRANAAFDIFSRMR-------MNGI----------EPDDITFVGLLSACSHSG 442

Query: 519 ALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            L  G+ I     R    T  +     ++D+    G    A  + + MP+  + + W  +
Sbjct: 443 MLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSL 502

Query: 577 IMAYGMHG 584
           + A  +HG
Sbjct: 503 LKACKIHG 510



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 142/268 (52%), Gaps = 11/268 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +     +  ++EA+  + EM   ++++PD      V+ A A    + LG+ +H+ 
Sbjct: 188 SWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSW 247

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +  +G+  S++ + N L+++Y K G ++    ++FD +  KD +SWN++I        + 
Sbjct: 248 INDHGFA-SNLKIVNALIDLYSKFG-EVETACELFDGLWNKDVISWNTLIGGYTHMNLYK 305

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWN-TF 218
            AL  F+ ML S   P+  T++S+  AC++L   D   +GR +H      L+    N + 
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAID---IGRWIHVYINKKLKGVVTNVSS 362

Query: 219 IMNALMAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           +  +L+ MYAK G +D A+ +F  S  +R L +WN ++S  + + +   A     +M + 
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
           GI+PD ++   +L ACSH  MLD G+ I
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNI 450


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/650 (37%), Positives = 371/650 (57%), Gaps = 38/650 (5%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           AKT+F   ++     +N+++ +LS +   LEA+     M   G+KPD ++   V+ AC+ 
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
             +   G  +H + +++    D S++ S+L+ +Y N +++   +++F+  S + +  WNA
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECD-SYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 266

Query: 356 MITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           MI GY ++     A M+F +M   +V   W       ++V     ++   D+        
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCRDVIS-WNTMINGYAIVGKIDEAKRLFDEMP------ 319

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
                R+    N+++  + + G +E +  +F +M  RD VSWN+M+  Y  CG+  +AL 
Sbjct: 320 ----ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 375

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  +M+                  +  KP   T++++L  C  L AL KG  +H Y   N
Sbjct: 376 LFDQMR-----------------AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN 418

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            +  + +VG+ALVDMYAKCG ++ A +VF+ M  ++V+ WN II    +HG  +E  +L 
Sbjct: 419 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLF 478

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           K M   G     V+PN++TF+A+ +ACSH+GMV EG  L   M   YGIEP  +HY CV+
Sbjct: 479 KEMKEAG-----VEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI 533

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLL RAG +E+A +LI  MP E + + A  +LLG CRIH N E+GE+  + L  L+P  +
Sbjct: 534 DLLARAGFLEEAMELIGTMPMEPNPS-ALGALLGGCRIHGNFELGEMVGKRLINLQPCHS 592

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
             Y+LLSNIY++A+ WD A  VR  MK  G+ K PG S IE    +H+F+AGD SH +S 
Sbjct: 593 GRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESN 652

Query: 774 QLHGFLENLSERMRKE-GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
           +++  L  +  R++   GY  DT  VL ++ EE+KE  L  HSEKLAIA+G+L+      
Sbjct: 653 KIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEA 712

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           IR+ KNLRVC DCH   K ISK+  REII+RD  RFHHF++G CSC D+W
Sbjct: 713 IRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 180/350 (51%), Gaps = 18/350 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R+ + S    EA+  Y  M +S ++PD+  +P V+KA         G  +H HVVK G+
Sbjct: 167 IRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGF 226

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
              S  V+ +L+++Y   G D+    ++F+  + +D VSWN+MI    +  +   A   F
Sbjct: 227 ECDSYIVS-SLIHLYAN-GKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVF 284

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAM 226
             M+  +V   +  +   A+            +G+      L   + E N    N+++A 
Sbjct: 285 DRMVCRDVISWNTMINGYAI------------VGKIDEAKRLFDEMPERNLVSWNSMLAG 332

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           + K G V+DA  LF     RD+VSWN++++  +Q  K  EA+    QM   G+KP   ++
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            S+L AC+HL  LD G  +H Y   N I + NS VG+ALVDMY  C ++    +VF+ + 
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEV-NSIVGTALVDMYAKCGKISLATQVFNAME 451

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            K +  WN +I G   +   +EA  LF +M+E AG+ PN  T  +++ AC
Sbjct: 452 SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKE-AGVEPNDITFVAILSAC 500



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 194/438 (44%), Gaps = 40/438 (9%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +F  +       +NS+I  L        AL  +  ML S ++P   T   V  AC+  S 
Sbjct: 151 IFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSV 210

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                 G  VH + ++ G E +++I+++L+ +YA    +  AK LF     RD+VSWN +
Sbjct: 211 T---WFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    ++ +   A M   +M  R    D +S  +++   + +  +D  K +       ++
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           +  NS +       +  C  VE    +F  +  + +  WN+M+  Y Q     EAL LF 
Sbjct: 324 VSWNSMLAG-----FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFD 378

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M  V G+ P   T+ S++ AC    A      +H +     +  +  V  AL+DMY++ 
Sbjct: 379 QMRAV-GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC 437

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G+I ++  +F+ ME +D ++WNT+I G  I G   +A  L +EM+    E          
Sbjct: 438 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE---------- 487

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMY 549
                  PN IT + +L  C     + +G+++      +Y I       V     ++D+ 
Sbjct: 488 -------PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIE----PKVEHYGCVIDLL 536

Query: 550 AKCGCLNFARRVFDLMPV 567
           A+ G L  A  +   MP+
Sbjct: 537 ARAGFLEEAMELIGTMPM 554



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 114/190 (60%), Gaps = 5/190 (2%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N+++  + KCG ++ D + +F  +  +D VSWNSM+A   + GK + AL  F  M    V
Sbjct: 327 NSMLAGFVKCG-NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385

Query: 177 EPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
           +P+  T+VS+  AC++L   D GL L   ++ N + V   N+ +  AL+ MYAK G++  
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV---NSIVGTALVDMYAKCGKISL 442

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F + E +D+++WNTI++ ++ +    EA    ++M   G++P+ ++  ++L ACSH
Sbjct: 443 ATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSH 502

Query: 296 LEMLDTGKEI 305
             M+D G+++
Sbjct: 503 AGMVDEGQKL 512



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 4/163 (2%)

Query: 37  SQTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS 94
           S+  C++  SW   L   A+  +  EA+  + +M    ++P      ++L A A +  L 
Sbjct: 347 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALD 406

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
            G  +H ++      ++S+ V   LV+MY KCG  +    +VF+ +  KD ++WN++IA 
Sbjct: 407 KGLHLHTYINDNRIEVNSI-VGTALVDMYAKCGK-ISLATQVFNAMESKDVLAWNTIIAG 464

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           +   G    A + F+ M  + VEP+  T V++  ACS+    D
Sbjct: 465 MAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVD 507


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/711 (36%), Positives = 402/711 (56%), Gaps = 34/711 (4%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRIT 141
           +L+A    + L  GK +H  VV  G   + V V   L+++Y  C  +++D  K VFD I 
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQ-NDVYVCKNLISLYVSC--NLFDYAKNVFDVIE 65

Query: 142 EKDQVSW-NSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
              ++S  N ++A   R   +D AL  F ++M Y  ++P S+T  SV  AC  L R   +
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR---V 122

Query: 200 RLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            LG+ +H   ++ G   +  + ++L+ MYAK    + A  LF    D+D+  WNT++S  
Sbjct: 123 VLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCY 182

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            Q+ KF EA+ +   M   G +PD V+I + + +C+ L  LD G+EIH   + +   +D 
Sbjct: 183 YQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMD- 241

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           SFV +ALVDMY  C ++E    VF+ + +K +  WN+MI GYG        + LF +M  
Sbjct: 242 SFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYS 301

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ P  TT++S + AC +S    + + +HG+ I+  +  D ++ ++LMD+Y + G++E
Sbjct: 302 -EGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++TIF  M    TVSWN MI+GY   G+  DAL L  EM     E              
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVE-------------- 406

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
              P++IT  +VL  C  L+AL KG+EIH   +   L  + VV  AL+DMYAKCG +  A
Sbjct: 407 ---PDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEA 463

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
             VF  +P R++++W  +I AYG HG   E LEL   M+        VKP+ VTF+A+ +
Sbjct: 464 FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSN-----VKPDRVTFLAILS 518

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           ACSH+G+V +G+  F +M + YGI P  +HY+C++ LLGRAG++ +AY+++   P   D 
Sbjct: 519 ACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDD 578

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
               S+L  ACR+H+N+++G   A+NL   +PD +S Y++LSN+Y+S   WD+   VR K
Sbjct: 579 FQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSK 638

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           MK++G++K PGCSWIE  ++I  F   D SH   E +   L  L+  M  E
Sbjct: 639 MKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 236/443 (53%), Gaps = 25/443 (5%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD++ +P+VLKA  G++ + LG+ IH  +VK G  +  + V ++LV MY KC ++   
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGL-MVDIVVGSSLVGMYAKC-NEFEC 159

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             K+FD + +KD   WN++I+   + GK++ AL  F MM     EP S T+ +   +C+ 
Sbjct: 160 AVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCAR 219

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L   D    GR++H   +  G   ++F+  AL+ MY K G+++ A  +F+   ++ +V+W
Sbjct: 220 LLDLDR---GREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAW 276

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N++++        +  +   ++M   G+KP   ++ S L ACS    L  GK +H Y +R
Sbjct: 277 NSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIR 336

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N I  D  F+ S+L+D+Y  C +VE    +F  +       WN MI+GY       +AL 
Sbjct: 337 NRIQPD-IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALR 395

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF +M + + + P+A T +SV+ AC +  A      IH   ++  LG +  V  AL+DMY
Sbjct: 396 LFGEMSK-SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMY 454

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++ G +E +  +F  +  RD VSW +MIT Y   G+  +AL L  EM        ++NV 
Sbjct: 455 AKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEML-------QSNV- 506

Query: 492 DLDETVLRPKPNSITLMTVLPGC 514
                    KP+ +T + +L  C
Sbjct: 507 ---------KPDRVTFLAILSAC 520



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 206/406 (50%), Gaps = 26/406 (6%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +P     C   W   +    +S +F EA+  +  M R   +PD+      + + A + DL
Sbjct: 167 MPDKDVAC---WNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDL 223

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
             G++IH  +V  G+ + S  V+  LV+MYGKCG  +    +VF+++  K  V+WNSMI 
Sbjct: 224 DRGREIHKELVNSGFRMDSF-VSAALVDMYGKCGQ-LEMAIEVFEQMPNKTVVAWNSMIN 281

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
                G     ++ F+ M    V+P+  TL S  +ACS  ++   L  G+ VHG  +R  
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQ---LLEGKFVHGYIIRNR 338

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + + F+ ++LM +Y K G+V+ A+T+FK       VSWN ++S      K  +A+    
Sbjct: 339 IQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFG 398

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M+   ++PD ++  SVL ACS L  L+ G+EIH   +  + L +N  V  AL+DMY  C
Sbjct: 399 EMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERN-LGNNEVVMGALLDMYAKC 457

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             VE    VF  + ++ +  W +MIT YG +    EAL LF +M + + + P+  T  ++
Sbjct: 458 GAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQ-SNVKPDRVTFLAI 516

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           + AC            H   +  GL    Y  N ++++Y  + RIE
Sbjct: 517 LSACS-----------HAGLVDDGL----YHFNQMINVYGIIPRIE 547



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 29/305 (9%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +A  +  ++ A V S++    + +H   + LGL  D YV   L+ +Y      + +K +F
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 445 DDMEVRDTVSW-NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--K 501
           D +E    +S  N ++ GYT    + +AL L                   D+ +  P  K
Sbjct: 62  DVIENPFEISLCNGLMAGYTRNCMYDEALGL------------------FDKLMCYPCLK 103

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+S T  +VL  CG L  +  G+ IH   ++  L  D+VVGS+LV MYAKC     A ++
Sbjct: 104 PDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKL 163

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD MP ++V  WN +I  Y   G+ +E L     M   G      +P+ VT     ++C+
Sbjct: 164 FDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFG-----FEPDSVTITTAISSCA 218

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
               +  G ++  ++ +  G        A +VD+ G+ G++E A ++   MP +     A
Sbjct: 219 RLLDLDRGREIHKELVNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNK--TVVA 275

Query: 682 WSSLL 686
           W+S++
Sbjct: 276 WNSMI 280


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/821 (32%), Positives = 433/821 (52%), Gaps = 75/821 (9%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K G  + D  ++F R+  +D  SWN++++   +  ++ ++LE F  M
Sbjct: 90  NVITHNVMLNGYAKLGR-LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSM 148

Query: 172 LYS-NVEPSSFTLVSVALACSNL-----------------SRRDG----------LRLGR 203
             S +  P++FTL     +C  L                 S+ D           +R G 
Sbjct: 149 HRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208

Query: 204 QVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
               + L  R+ E   F  N+++A Y K   VD A  LF S  +RD+VSWN +VS+LSQ+
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EA+  +  M  +G++ D  +  S L AC+ L  L  GK++HA  +RN   ID  +V
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID-PYV 327

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVA 380
            SALV++Y      +  + VF+ + D+    W  +I+G+ Q     E++ LF +M  E+ 
Sbjct: 328 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 387

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            L  +   +++++  C           +H   +K G  +   V N+L+ MY++   ++ +
Sbjct: 388 TL--DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM-----------------QNMEE 483
           + IF  M  +D VSW +MIT Y+  G    A      M                    EE
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 505

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
           +  R     L E  +RP  + +T +T+  GC  L A   G +I    ++  L  D  V +
Sbjct: 506 DGLRMYKVMLSEEYVRP--DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 563

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           A++ MY+KCG +  AR+VFD + V+++++WN +I  Y  HG G++ +E+  +++  G+  
Sbjct: 564 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA-- 621

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
              KP+ ++++A+ + CSHSG+V EG   F  MK  + I P  +H++C+VDLLGRAG + 
Sbjct: 622 ---KPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLT 678

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A  LI+ MP +   A  W +LL AC+IH N E+ E+AA+++F L+   +  Y+L++ IY
Sbjct: 679 EAKDLIDDMPMK-PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIY 737

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A   D +  +RK M++ G++K PG SW+E  +++H F A D SH Q   +   L+ L 
Sbjct: 738 ADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELM 797

Query: 784 ERMRKEGYV--PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           E++ + GYV    T   +H             HSEKLA+AFG++  P    I + KNLR+
Sbjct: 798 EKIARLGYVRTDSTRSEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNLRI 844

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K IS +  RE ++RD  RFHHF  G+CSCGDYW
Sbjct: 845 CGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 266/607 (43%), Gaps = 105/607 (17%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  LS    L L        + +   N    N ++  YAKLGR+ DA  LF 
Sbjct: 64  TLLHAYLSCGALSDARRLLL--------MDIAHPNVITHNVMLNGYAKLGRLSDAVELFG 115

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q+ ++L ++     M   G   P+  ++A  + +C  L    
Sbjct: 116 RMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHS 175

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR-------------------- 340
              ++ A   + D   D+S V +ALVDM+  C  V+   R                    
Sbjct: 176 LALQLLAMVQKFDSQ-DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGY 234

Query: 341 -----------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                      +FD + ++ +  WN M++   Q+    EAL + + M+   G+  ++TT 
Sbjct: 235 VKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS-KGVRLDSTTY 293

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S + AC R  +    + +H   I+     D YV +AL+++Y++ G  + +K +F+ +  
Sbjct: 294 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 353

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ V+W  +I+G+   G   +++ L  +M        R  +  LD+           L T
Sbjct: 354 RNNVAWTVLISGFLQYGCFTESVELFNQM--------RAELMTLDQ---------FALAT 396

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC----------------- 552
           ++ GC +   L  G+++H+  +++     VVV ++L+ MYAKC                 
Sbjct: 397 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456

Query: 553 --------------GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                         G +  AR  FD M  +NVITWN ++ AY  HG  ++ L + K M++
Sbjct: 457 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E      V+P+ VT++ LF  C+  G    G D         G+         V+ +  +
Sbjct: 517 E----EYVRPDWVTYVTLFKGCADLGANKLG-DQIIGRTVKVGLIIDTSVANAVITMYSK 571

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----QNVEI-GEIAAQNLFLLEPDVA 713
            G++ +A ++ + +        +W++++     H    Q +EI  +I  +     +PD  
Sbjct: 572 CGRILEARKVFDFL--NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG---AKPDYI 626

Query: 714 SHYVLLS 720
           S+  +LS
Sbjct: 627 SYVAVLS 633



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 236/506 (46%), Gaps = 70/506 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   ++M    ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ LV +Y K G    +   VF+ + +++ V+W  +I+   ++G +
Sbjct: 317 IR---NLPHIDPYVASALVELYAKSGC-FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 372

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C   SR D L LGRQ+H   L+ G+    ++ 
Sbjct: 373 TESVELFNQMRAELMTLDQFALATLISGCC--SRMD-LCLGRQLHSLCLKSGQIQAVVVS 429

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           N+L++MYAK   +  A+ +F+   ++D+VSW +++++ SQ     +A  F   M+ +   
Sbjct: 430 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 489

Query: 279 ------------------------------IKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
                                         ++PD V+  ++   C+ L     G +I   
Sbjct: 490 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 549

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  ++ID S V +A++ MY  C  +   R+VFDF++ K I  WNAMITGY Q+   ++
Sbjct: 550 TVKVGLIIDTS-VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 608

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPAC-----VRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           A+ +F  + +  G  P+  +  +V+  C     V+   F        H I  GL      
Sbjct: 609 AIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEH---- 663

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
            + ++D+  R G +  +K + DDM ++ T   W  +++    C  HG+         N  
Sbjct: 664 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA---CKIHGN---------NEL 711

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLM 508
            E    +V++LD     P   S  LM
Sbjct: 712 AELAAKHVFELDS----PDSGSYMLM 733



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 91/343 (26%)

Query: 409 HGHAIKLGLGRDRYVQNA------------------LMDM--------------YSRMGR 436
           HG  + +GL    ++QN                   LMD+              Y+++GR
Sbjct: 47  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  +  +F  M  RD  SWNT+++GY    Q+   L+ L    +M    +          
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQY---LVSLETFLSMHRSGD---------- 153

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN+ TL   +  CGAL   +   ++ A   +     D  V +ALVDM+ +CG ++
Sbjct: 154 ---SWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 210

Query: 557 FARR-------------------------------VFDLMPVRNVITWNVIIMAYGMHGE 585
            A R                               +FD MP R+V++WN+++ A    G 
Sbjct: 211 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 270

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E L+++ +M ++G     V+ +  T+ +   AC+    +  G  L  ++  +    P 
Sbjct: 271 VREALDMVVDMQSKG-----VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PH 322

Query: 646 PDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            D Y  + +V+L  ++G  ++A  + N +    +   AW+ L+
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV--AWTVLI 363



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 44/268 (16%)

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-- 568
           L  CGA  ALA  + +H   +   LA+ V + + L+  Y  CG L+ ARR+  LM +   
Sbjct: 31  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LMDIAHP 89

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEG---------------------------S 601
           NVIT NV++  Y   G   + +EL   M A                              
Sbjct: 90  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
           R G+  PN  T      +C   G  S  + L   M   +  +   +  A +VD+  R G 
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 208

Query: 662 VEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYV 717
           V+ A +L   +  P  F +    S L G  + +     G   A  LF  + E DV S  +
Sbjct: 209 VDLASRLFVRIKEPTMFCRN---SMLAGYVKTY-----GVDHALELFDSMPERDVVSWNM 260

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           ++S +  S ++  +A+D+   M+  GVR
Sbjct: 261 MVSALSQSGRV-REALDMVVDMQSKGVR 287


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/768 (34%), Positives = 399/768 (51%), Gaps = 126/768 (16%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT++  Y   G  + +  K+F     +  ++W+S+I+  CR+G    ALE F  M Y   
Sbjct: 76  NTMIGAYANSGR-LNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
            P+ FT  SV   CS       L  G+Q+H ++++   + N F++  L+ MYAK   + +
Sbjct: 135 RPNQFTWGSVLRVCSMYVL---LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE 191

Query: 236 AKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           A+ LF+   D R+ V W  +V+  SQN    +A+   R M   GI+ +  +  S+L AC 
Sbjct: 192 AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACG 251

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
            +     G ++H   +R+     N FVGSALVDMY  C ++   RR+ + +       WN
Sbjct: 252 SISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           +MI G  +    EEAL LF ++  +  +  +  T  S+                      
Sbjct: 311 SMIVGCVRQGLGEEALSLF-RIMHLRHMKIDEFTYPSL---------------------- 347

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
                   V NAL+DMY++ G  + +  +F+ M  +D +SW +++TG    G + +AL L
Sbjct: 348 --------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 399

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             EM+                 ++   P+ I +  V      LSAL              
Sbjct: 400 FCEMR-----------------IMGIHPDQIVIAAV------LSAL-------------- 422

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                   ++LV MYAKCGC+  A +VFD M +++VITW  +I+ Y  +G G+       
Sbjct: 423 -------DNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------- 468

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
                                               D F  M++ YGI+P P+HYAC++D
Sbjct: 469 ------------------------------------DYFQSMEEVYGIKPGPEHYACMID 492

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGR+GK+ +A +L+N M  + D A  W +LL ACR+H NVE+GE AA NLF LEP  A 
Sbjct: 493 LLGRSGKLMEAKELLNQMAVQPD-ATVWKALLAACRVHGNVELGERAANNLFELEPKNAV 551

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLLSN+YS+A  W++A   R+ MK  GV KEPGCSWIE   ++H+F++ D SH ++ +
Sbjct: 552 PYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAE 611

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  ++ +   +++ GYVPD +  LH+++EE KE  L  HSEKLA+AFG+L  PPG  IR
Sbjct: 612 IYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIR 671

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + KNLR+C DCH A K++S +  R +ILRD   FHHF+ G CSC DYW
Sbjct: 672 IFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 245/564 (43%), Gaps = 95/564 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    R     EA+  + EM     +P+ F + +VL+  +    L  GKQIHAH 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K  +  S+  V   LV+MY KC   +   Y       +++ V W +M+    + G    
Sbjct: 165 IKTQFD-SNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+E FR M    +E + FT  S+  AC ++S       G QVHG  +R G   N F+ +A
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSIS---ACGFGAQVHGCIVRSGFGANVFVGSA 280

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K G + +A+ + ++ E  D VSWN+++    +     EA+   R M LR +K D
Sbjct: 281 LVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKID 340

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  S+                               V +ALVDMY      +    VF
Sbjct: 341 EFTYPSL-------------------------------VNNALVDMYAKRGYFDYAFDVF 369

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + ++DK +  W +++TG   N   EEAL LF +M  + G+ P+   +++V+ A       
Sbjct: 370 EKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIMGIHPDQIVIAAVLSA------- 421

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                               + N+L+ MY++ G IE +  +FD ME++D ++W  +I GY
Sbjct: 422 --------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGY 461

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G+  D        Q+MEE      VY      ++P P     M  L G         
Sbjct: 462 AQNGRGRDYF------QSMEE------VYG-----IKPGPEHYACMIDLLG-------RS 497

Query: 523 GKEIHAYAIRNMLAT--DVVVGSALVDMYAKCGCLNFARR----VFDLMPVRNVITWNVI 576
           GK + A  + N +A   D  V  AL+      G +    R    +F+L P +N + + ++
Sbjct: 498 GKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP-KNAVPYVLL 556

Query: 577 IMAYGMHGEGQEVLELLKNMVAEG 600
              Y   G+ +E  +  + M   G
Sbjct: 557 SNLYSAAGKWEEAAKTRRLMKLRG 580



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 40/337 (11%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           RD    N ++  Y+  GR+  ++ +F +  +R  ++W+++I+GY   G   +AL L  EM
Sbjct: 70  RDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEM 129

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q   E                 +PN  T  +VL  C     L KGK+IHA+AI+    ++
Sbjct: 130 QYEGE-----------------RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
             V + LVDMYAKC C+  A  +F+L P  RN + W  ++  Y  +G+G + +E  ++M 
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLL 656
            EG     ++ N+ TF ++  AC        G  +    ++  +G        + +VD+ 
Sbjct: 233 GEG-----IECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG--SALVDMY 285

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ-----NLFLLEPD 711
            + G + +A +++  M  E D   +W+S++  C + Q   +GE A       +L  ++ D
Sbjct: 286 SKCGDLSNARRMLETM--EVDDPVSWNSMIVGC-VRQG--LGEEALSLFRIMHLRHMKID 340

Query: 712 VASHYVLLSN----IYSSAQLWDKAMDVRKKMKEMGV 744
             ++  L++N    +Y+    +D A DV +KM +  V
Sbjct: 341 EFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDV 377



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 16/198 (8%)

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +KCG ++ AR++FD+MP R+  +WN +I AY   G   E  +L                 
Sbjct: 52  SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSC-------- 103

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL- 668
            +T+ +L +     G   E ++LF++M+ + G  P+   +  V+ +      +E   Q+ 
Sbjct: 104 -ITWSSLISGYCRYGCDVEALELFWEMQYE-GERPNQFTWGSVLRVCSMYVLLEKGKQIH 161

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
            + +  +FD       + G   ++   +   + A+ LF L PD  +H +  + +   +Q 
Sbjct: 162 AHAIKTQFDSNAF--VVTGLVDMYAKCKC-ILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218

Query: 729 WD--KAMDVRKKMKEMGV 744
            D  KA++  + M+  G+
Sbjct: 219 GDGHKAIECFRDMRGEGI 236


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/747 (34%), Positives = 406/747 (54%), Gaps = 46/747 (6%)

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           MIA   R G+   ALE +  M    +    F + S+  AC+ L     L  GR++H + +
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQ---ALEEGRRLHEHLI 57

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
             G   +  +  AL+ MYAK G +DDAK +F+  E +DL +W++I+++ ++  +   AV+
Sbjct: 58  ITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVV 117

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             R+M   G++P+ V+ A  L  C+ +  L  G+ IH   L + +  D+    S L++MY
Sbjct: 118 LYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDS-LLNMY 176

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C E+   R+VF+ +  + +  + AMI+ Y Q     EAL LF +M +V  + PNA T 
Sbjct: 177 LKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTF 236

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           ++++ A            +H H    G   +  VQNAL+ MY + G    ++ +FD M  
Sbjct: 237 ATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA 296

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ +SW +MI  Y   G   +AL L + M                      +P+ ++  +
Sbjct: 297 RNVISWTSMIAAYAQHGNPQEALNLFKRMD--------------------VEPSGVSFSS 336

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
            L  C  L AL +G+EIH   +   LA+  +  ++L+ MYA+CG L+ ARRVF+ M  R+
Sbjct: 337 ALNACALLGALDEGREIHHRVVEANLASPQM-ETSLLSMYARCGSLDDARRVFNRMKTRD 395

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
             + N +I A+  HG  ++ L + + M  EG     +  + +TF+++  ACSH+ +V++ 
Sbjct: 396 AFSCNAMIAAFTQHGRKKQALRIYRKMEQEG-----IPADGITFVSVLVACSHTSLVADC 450

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
            D    +  D+G+ P  +HY C+VD+LGR+G++ DA +L+  MP + D A AW +LL  C
Sbjct: 451 RDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQAD-AVAWMTLLSGC 509

Query: 690 RIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
           + H +++ GE AA+ +F L P     YV LSN+Y++A+ +D A  VRK+M+E GV +   
Sbjct: 510 KRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVA 569

Query: 750 CSWIEFGDEIHKFLAGDGSHQQS-------EQLHGFLENLSERMRKEGYVPDTSCVLHN- 801
            S+IE  +E+H F +G    QQ        E++   L  L E M++ GYVPDT  V    
Sbjct: 570 VSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQ 629

Query: 802 ---VNEEEKETLLCGHSEKLAIAFGIL---NTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
               +EEEK+  LC HSE+LAIA+G++   +      +RV  + RVC+ CH A K +S I
Sbjct: 630 QGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDI 689

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             + I +RD  RFHHF+ G CSCGD+W
Sbjct: 690 TEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 264/524 (50%), Gaps = 34/524 (6%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           EM    I  D F   +++ A   +Q L  G+++H H++  G+  + + +   L+ MY KC
Sbjct: 20  EMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGF-RTDIPLETALLQMYAKC 78

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           GS + D  +VF+ +  KD  +W+S+IA   R G+ ++A+  +R M+   VEP+  T    
Sbjct: 79  GS-LDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACA 137

Query: 187 ALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
              C++++   GL  GR +H   L  +V + +  + ++L+ MY K   + +A+ +F+  +
Sbjct: 138 LGGCASVA---GLADGRAIHQRILASKVPQ-DDVLQDSLLNMYLKCDEMVEARKVFEGMK 193

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            R++ S+  ++S+  Q  +  EA+ +F R   +  I+P+  + A++L A   L  L+ G+
Sbjct: 194 ARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGR 253

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H + L +     N  V +ALV MY  C      R+VFD ++ + +  W +MI  Y Q+
Sbjct: 254 KVHRH-LASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 312

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              +EAL LF +M+    + P+  + SS + AC    A  +   IH   ++  L   + +
Sbjct: 313 GNPQEALNLFKRMD----VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQ-M 367

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           + +L+ MY+R G ++ ++ +F+ M+ RD  S N MI  +T   QHG     LR  + ME+
Sbjct: 368 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFT---QHGRKKQALRIYRKMEQ 424

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVG 542
           E                  + IT ++VL  C   S +A  ++ + +  + + +   V   
Sbjct: 425 EG--------------IPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHY 470

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
             +VD+  + G L  A  + + MP + + + W  ++     HG+
Sbjct: 471 LCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGD 514



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 225/432 (52%), Gaps = 20/432 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + AR+ +   A++ Y  M    ++P+   F   L   A +  L+ G+ IH  +
Sbjct: 98  AWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRI 157

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +        V + ++L+NMY KC  +M +  KVF+ +  ++  S+ +MI+   + G+   
Sbjct: 158 LASKVPQDDV-LQDSLLNMYLKC-DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215

Query: 164 ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           ALE F RM     +EP+++T  ++  A   L     L  GR+VH +    G + N  + N
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLG---NLEKGRKVHRHLASRGFDTNVVVQN 272

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K G   +A+ +F S   R+++SW +++++ +Q+    EA+   ++M    ++P
Sbjct: 273 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEP 329

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            GVS +S L AC+ L  LD G+EIH   +  ++   +  + ++L+ MY  C  ++  RRV
Sbjct: 330 SGVSFSSALNACALLGALDEGREIHHRVVEANLA--SPQMETSLLSMYARCGSLDDARRV 387

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  +     NAMI  + Q+   ++AL ++ KME+  G+  +  T  SV+ AC  +  
Sbjct: 388 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQ-EGIPADGITFVSVLVACSHTSL 446

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNAL--MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTM 458
             D       ++ +  G    V++ L  +D+  R GR+  ++ + + M  + D V+W T+
Sbjct: 447 VADCRDFL-QSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTL 505

Query: 459 ITGYTICGQHGD 470
           ++G   C +HGD
Sbjct: 506 LSG---CKRHGD 514


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/764 (35%), Positives = 417/764 (54%), Gaps = 31/764 (4%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R    W   +R       F  A+L Y +M  S++ PD + FP V+KA  G+ ++ L  
Sbjct: 73  ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 132

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H      G+ +  +   + L+ +Y   G  + D  +VFD +  +D + WN M+    +
Sbjct: 133 VVHDTARSLGFHVD-LFAGSALIKLYADNGY-IRDARRVFDELPLRDTILWNVMLRGYVK 190

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G +D A+  F  M  S    +S T   +   C+    R     G Q+HG  +  G E++
Sbjct: 191 SGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICAT---RGNFCAGTQLHGLVIGSGFEFD 247

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N L+AMY+K G +  A+ LF +    D V+WN +++   QN    EA      M  
Sbjct: 248 PQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 307

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            G+KPD V+ AS LP+      L   KE+H+Y +R+ +  D  ++ SAL+D+Y    +VE
Sbjct: 308 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD-VYLKSALIDVYFKGGDVE 366

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R++F       +A+  AMI+GY  +  + +A+  F  + +  G+  N+ TM+SV+PAC
Sbjct: 367 MARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ-EGMVTNSLTMASVLPAC 425

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
               A    + +H H +K  L     V +A+ DMY++ GR++++   F  M  RD+V WN
Sbjct: 426 AAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWN 485

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +MI+ ++  G+   A+ L R+M                  +   K +S++L + L     
Sbjct: 486 SMISSFSQNGKPEIAIDLFRQMG-----------------MSGAKFDSVSLSSALSAAAN 528

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  GKE+H Y IRN  ++D  V S L+DMY+KCG L  A  VF+LM  +N ++WN I
Sbjct: 529 LPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSI 588

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I AYG HG  +E L+L   M+  G     + P+ VTF+ + +AC H+G+V EG+  F+ M
Sbjct: 589 IAAYGNHGCPRECLDLYHEMLRAG-----IHPDHVTFLVIISACGHAGLVDEGIHYFHCM 643

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             +YGI    +HYAC+VDL GRAG+V +A+  I  MP   D AG W +LLGACR+H NVE
Sbjct: 644 TREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPD-AGVWGTLLGACRLHGNVE 702

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + ++A+++L  L+P  + +YVLLSN+++ A  W   + VR  MKE GV+K PG SWI+  
Sbjct: 703 LAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVN 762

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
              H F A DG+H +S +++  L++L   +RK+GYVP     LH
Sbjct: 763 GGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPLH 806



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 293/610 (48%), Gaps = 37/610 (6%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
           ++ +A +    +   +Q+H  V+  G G      ++ ++ +Y  CG    D   +F  + 
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMG-DVCAPSSRVLGLYVLCGR-FRDAGNLFFELE 73

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
            +  + WN MI  L   G +D AL  +  ML SNV P  +T   V  AC  L   + + L
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGL---NNVPL 130

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
              VH  +  +G   + F  +AL+ +YA  G + DA+ +F     RD + WN ++    +
Sbjct: 131 CMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVK 190

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           +  F  A+    +M       + V+   +L  C+       G ++H   + +    D   
Sbjct: 191 SGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQ- 249

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V + LV MY  C  +   R++F+ +       WN +I GY QN + +EA  LF  M   A
Sbjct: 250 VANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS-A 308

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ P++ T +S +P+ + S +    + +H + ++  +  D Y+++AL+D+Y + G +E++
Sbjct: 309 GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMA 368

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + IF    + D      MI+GY + G + DA+   R +              + E ++  
Sbjct: 369 RKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWL--------------IQEGMVT- 413

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
             NS+T+ +VLP C A++AL  GKE+H + ++  L   V VGSA+ DMYAKCG L+ A  
Sbjct: 414 --NSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYE 471

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
            F  M  R+ + WN +I ++  +G+ +  ++L + M   G++   V  +     A     
Sbjct: 472 FFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPA 531

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
            + G    G    Y +++ +    S D +  + ++D+  + G +  A+ + N+M  + + 
Sbjct: 532 LYYGKEMHG----YVIRNAF----SSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEV 583

Query: 679 AGAWSSLLGA 688
             +W+S++ A
Sbjct: 584 --SWNSIIAA 591



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 233/516 (45%), Gaps = 31/516 (6%)

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFK 241
           L S+  ACS+ S    ++  RQVH   +  G  +    ++ ++ +Y   GR  DA  LF 
Sbjct: 14  LESLFRACSDASM---VQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFF 70

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
             E R  + WN ++  L     F  A++F  +M    + PD  +   V+ AC  L  +  
Sbjct: 71  ELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 130

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
              +H  A      +D  F GSAL+ +Y +   +   RRVFD +  +   LWN M+ GY 
Sbjct: 131 CMVVHDTARSLGFHVD-LFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYV 189

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++   + A+  F +M     +  N+ T + ++  C     F     +HG  I  G   D 
Sbjct: 190 KSGDFDNAIGTFCEMRTSYSM-VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDP 248

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V N L+ MYS+ G +  ++ +F+ M   DTV+WN +I GY   G   +A  L   M + 
Sbjct: 249 QVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISA 308

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                              KP+S+T  + LP      +L   KE+H+Y +R+ +  DV +
Sbjct: 309 GV-----------------KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 351

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            SAL+D+Y K G +  AR++F    + +V     +I  Y +HG   + +   + ++ EG 
Sbjct: 352 KSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEG- 410

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               +  N +T  ++  AC+    +  G +L   +     +E   +  + + D+  + G+
Sbjct: 411 ----MVTNSLTMASVLPACAAVAALKPGKELHCHILKKR-LENIVNVGSAITDMYAKCGR 465

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           ++ AY+    M      +  W+S++ +   +   EI
Sbjct: 466 LDLAYEFFRRMSDR--DSVCWNSMISSFSQNGKPEI 499



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 23/287 (8%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           T + S+  AC  +        +H   I  G+G      + ++ +Y   GR   +  +F +
Sbjct: 12  TQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFE 71

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           +E+R  + WN MI G  + G    AL+   +M         +NV           P+  T
Sbjct: 72  LELRYALPWNWMIRGLYMLGWFDFALLFYFKMLG-------SNV----------SPDKYT 114

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
              V+  CG L+ +     +H  A       D+  GSAL+ +YA  G +  ARRVFD +P
Sbjct: 115 FPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELP 174

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
           +R+ I WNV++  Y   G+    +     M     R      N VT+  + + C+  G  
Sbjct: 175 LRDTILWNVMLRGYVKSGDFDNAIGTFCEM-----RTSYSMVNSVTYTCILSICATRGNF 229

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             G  L + +    G E  P     +V +  + G +  A +L N MP
Sbjct: 230 CAGTQL-HGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMP 275


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/606 (37%), Positives = 344/606 (56%), Gaps = 24/606 (3%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           G++P+  +  S   A +      T G +IH+ A+R   L  + FV  A +DMY     ++
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +F  + ++ +  WNA++T    +    E +  +  + E  GL PN  +  +   AC
Sbjct: 65  LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGL-PNVVSACAFFNAC 123

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             +      E  HG  +K G   D  V N+++D Y +      ++ +FD M VR++VSW 
Sbjct: 124 AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 183

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +M+  Y   G   +A       +   EE                 P    + + L  C  
Sbjct: 184 SMVAAYAQNGAEEEAFAAYLGARRSGEE-----------------PTDFMVSSALTTCAG 226

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L  L  G+ +HA A+R+ +  ++ V SALVDMY KCGC+  A ++F   P RN++TWN +
Sbjct: 227 LLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAM 286

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y   G+ Q  L +  +M+    R GE  PN +T + +  +CS  G+  +G +LF  M
Sbjct: 287 IGGYAHIGDAQNALLVFDDMI----RSGETAPNYITLVNVITSCSRGGLTKDGYELFETM 342

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           ++ +GIEP  +HYACVVDLLGRAG  E AY++I  MP        W +LLGAC++H   E
Sbjct: 343 RERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR-PSISVWGALLGACKMHGKTE 401

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +G IAA+ LF L+P  + ++VLLSN+++SA  W +A D+RK+MK +G++K+PGCSW+ + 
Sbjct: 402 LGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWK 461

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           + +H F A D  H+   ++   L  L ++M+  GY+PDT   L+++ EEEKE+ +  HSE
Sbjct: 462 NVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSE 521

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+AFG++  PPG  IR+ KNLR+C DCH+A KFIS I  REII+RD  RFHHFK   C
Sbjct: 522 KLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQC 581

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 582 SCGDYW 587



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 220/485 (45%), Gaps = 41/485 (8%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYA 228
           ML   + P+ FT  S   A ++   R    +G Q+H  ++R G    + F+  A + MY 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRS--TIGPQIHSLAIRFGYLPVDPFVSCAALDMYF 58

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K GR+  A+ LF    +R++V+WN ++++   + + LE +     +   G  P+ VS  +
Sbjct: 59  KTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACA 118

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
              AC+    L  G++ H + ++    +D S + S +VD Y  CR     R VFD +  +
Sbjct: 119 FFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNS-MVDFYGKCRCAGKARAVFDGMGVR 177

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               W +M+  Y QN  +EEA   ++     +G  P    +SS +  C           +
Sbjct: 178 NSVSWCSMVAAYAQNGAEEEAFAAYLGARR-SGEEPTDFMVSSALTTCAGLLGLHLGRAL 236

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  A++  +  + +V +AL+DMY + G +E ++ IF +   R+ V+WN MI GY   G  
Sbjct: 237 HAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDA 296

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL++  +M    E                  PN ITL+ V+  C        G E+  
Sbjct: 297 QNALLVFDDMIRSGET----------------APNYITLVNVITSCSRGGLTKDGYELFE 340

Query: 529 YAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGE 585
             +R     +      + +VD+  + G    A  V   MP+R  I+ W  ++ A  MHG+
Sbjct: 341 -TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 399

Query: 586 GQEVLELLKNMVAEGSRGGEVKP----NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +     L  + AE  +  E+ P    N V    +FA+   +G  +E  D+  +MK + G
Sbjct: 400 TE-----LGRIAAE--KLFELDPQDSGNHVLLSNMFAS---AGRWAEATDIRKEMK-NVG 448

Query: 642 IEPSP 646
           I+  P
Sbjct: 449 IKKDP 453



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 14/407 (3%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M R  ++P++F FP+  KA A     S +G QIH+  +++GY      V+   ++MY K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G  +     +F  +  ++ V+WN+++      G+    +EA+  +  +   P+  +  + 
Sbjct: 61  GR-LKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAF 119

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+       L LG Q HG  ++ G E +  ++N+++  Y K      A+ +F     
Sbjct: 120 FNACAGAMY---LSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGV 176

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+ VSW ++V++ +QN    EA          G +P    ++S L  C+ L  L  G+ +
Sbjct: 177 RNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRAL 236

Query: 306 HAYALRNDILID-NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           HA A+R+   ID N FV SALVDMY  C  VE   ++F     + +  WNAMI GY    
Sbjct: 237 HAVAVRS--CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIG 294

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYV 423
             + AL++F  M       PN  T+ +V+ +C R     D  E       + G+      
Sbjct: 295 DAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEH 354

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHG 469
              ++D+  R G  E +  +   M +R ++S W  ++     C  HG
Sbjct: 355 YACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGA---CKMHG 398



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 7/248 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E I +Y  +  +   P+  +  A   A AG   LSLG+Q H  VVK G+ +  V+V N++
Sbjct: 96  ETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMD-VSVLNSM 154

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+ YGKC         VFD +  ++ VSW SM+A   + G  + A  A+     S  EP+
Sbjct: 155 VDFYGKCRC-AGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPT 213

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            F + S    C+ L    GL LGR +H  ++R   + N F+ +AL+ MY K G V+DA+ 
Sbjct: 214 DFMVSSALTTCAGLL---GLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 270

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLE 297
           +F     R+LV+WN ++   +       A++    M   G   P+ +++ +V+ +CS   
Sbjct: 271 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGG 330

Query: 298 MLDTGKEI 305
           +   G E+
Sbjct: 331 LTKDGYEL 338



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   + + A++    EA  +Y+   RS  +P +F   + L   AG+  L L
Sbjct: 173 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 232

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +HA  V+     +++ VA+ LV+MYGKCG  + D  ++F    +++ V+WN+MI   
Sbjct: 233 GRALHAVAVRSCID-ANIFVASALVDMYGKCGC-VEDAEQIFYETPQRNLVTWNAMIGGY 290

Query: 156 CRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLS-RRDGLRL 201
              G    AL  F  M+ S    P+  TLV+V  +CS     +DG  L
Sbjct: 291 AHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYEL 338


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/821 (32%), Positives = 433/821 (52%), Gaps = 75/821 (9%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           +V   N ++N Y K G  + D  ++F R+  +D  SWN++++   +  ++ ++LE F  M
Sbjct: 70  NVITHNVMLNGYAKLGR-LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSM 128

Query: 172 LYS-NVEPSSFTLVSVALACSNL-----------------SRRDG----------LRLGR 203
             S +  P++FTL     +C  L                 S+ D           +R G 
Sbjct: 129 HRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188

Query: 204 QVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
               + L  R+ E   F  N+++A Y K   VD A  LF S  +RD+VSWN +VS+LSQ+
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EA+  +  M  +G++ D  +  S L AC+ L  L  GK++HA  +RN   ID  +V
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID-PYV 307

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVA 380
            SALV++Y      +  + VF+ + D+    W  +I+G+ Q     E++ LF +M  E+ 
Sbjct: 308 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 367

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            L  +   +++++  C           +H   +K G  +   V N+L+ MY++   ++ +
Sbjct: 368 TL--DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM-----------------QNMEE 483
           + IF  M  +D VSW +MIT Y+  G    A      M                    EE
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 485

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
           +  R     L E  +RP  + +T +T+  GC  L A   G +I    ++  L  D  V +
Sbjct: 486 DGLRMYKVMLSEEYVRP--DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 543

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           A++ MY+KCG +  AR+VFD + V+++++WN +I  Y  HG G++ +E+  +++  G+  
Sbjct: 544 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA-- 601

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
              KP+ ++++A+ + CSHSG+V EG   F  MK  + I P  +H++C+VDLLGRAG + 
Sbjct: 602 ---KPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLT 658

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +A  LI+ MP +   A  W +LL AC+IH N E+ E+AA+++F L+   +  Y+L++ IY
Sbjct: 659 EAKDLIDDMPMK-PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIY 717

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A   D +  +RK M++ G++K PG SW+E  +++H F A D SH Q   +   L+ L 
Sbjct: 718 ADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELM 777

Query: 784 ERMRKEGYV--PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           E++ + GYV    T   +H             HSEKLA+AFG++  P    I + KNLR+
Sbjct: 778 EKIARLGYVRTDSTRSEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNLRI 824

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K IS +  RE ++RD  RFHHF  G+CSCGDYW
Sbjct: 825 CGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 266/607 (43%), Gaps = 105/607 (17%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  LS    L L        + +   N    N ++  YAKLGR+ DA  LF 
Sbjct: 44  TLLHAYLSCGALSDARRLLL--------MDIAHPNVITHNVMLNGYAKLGRLSDAVELFG 95

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNT++S   Q+ ++L ++     M   G   P+  ++A  + +C  L    
Sbjct: 96  RMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHS 155

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR-------------------- 340
              ++ A   + D   D+S V +ALVDM+  C  V+   R                    
Sbjct: 156 LALQLLAMVQKFDSQ-DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGY 214

Query: 341 -----------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                      +FD + ++ +  WN M++   Q+    EAL + + M+   G+  ++TT 
Sbjct: 215 VKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS-KGVRLDSTTY 273

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S + AC R  +    + +H   I+     D YV +AL+++Y++ G  + +K +F+ +  
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 333

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ V+W  +I+G+   G   +++ L  +M        R  +  LD+           L T
Sbjct: 334 RNNVAWTVLISGFLQYGCFTESVELFNQM--------RAELMTLDQ---------FALAT 376

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC----------------- 552
           ++ GC +   L  G+++H+  +++     VVV ++L+ MYAKC                 
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436

Query: 553 --------------GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                         G +  AR  FD M  +NVITWN ++ AY  HG  ++ L + K M++
Sbjct: 437 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E      V+P+ VT++ LF  C+  G    G D         G+         V+ +  +
Sbjct: 497 E----EYVRPDWVTYVTLFKGCADLGANKLG-DQIIGRTVKVGLIIDTSVANAVITMYSK 551

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----QNVEI-GEIAAQNLFLLEPDVA 713
            G++ +A ++ + +        +W++++     H    Q +EI  +I  +     +PD  
Sbjct: 552 CGRILEARKVFDFL--NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG---AKPDYI 606

Query: 714 SHYVLLS 720
           S+  +LS
Sbjct: 607 SYVAVLS 613



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 236/506 (46%), Gaps = 70/506 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   ++M    ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ LV +Y K G    +   VF+ + +++ V+W  +I+   ++G +
Sbjct: 297 IR---NLPHIDPYVASALVELYAKSGC-FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 352

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C   SR D L LGRQ+H   L+ G+    ++ 
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCC--SRMD-LCLGRQLHSLCLKSGQIQAVVVS 409

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-- 278
           N+L++MYAK   +  A+ +F+   ++D+VSW +++++ SQ     +A  F   M+ +   
Sbjct: 410 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 469

Query: 279 ------------------------------IKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
                                         ++PD V+  ++   C+ L     G +I   
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  ++ID S V +A++ MY  C  +   R+VFDF++ K I  WNAMITGY Q+   ++
Sbjct: 530 TVKVGLIIDTS-VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 588

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPAC-----VRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           A+ +F  + +  G  P+  +  +V+  C     V+   F        H I  GL      
Sbjct: 589 AIEIFDDILK-RGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEH---- 643

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
            + ++D+  R G +  +K + DDM ++ T   W  +++    C  HG+         N  
Sbjct: 644 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA---CKIHGN---------NEL 691

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLM 508
            E    +V++LD     P   S  LM
Sbjct: 692 AELAAKHVFELDS----PDSGSYMLM 713



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 91/343 (26%)

Query: 409 HGHAIKLGLGRDRYVQNA------------------LMDM--------------YSRMGR 436
           HG  + +GL    ++QN                   LMD+              Y+++GR
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  +  +F  M  RD  SWNT+++GY    Q+   L+ L    +M    +          
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSRQY---LVSLETFLSMHRSGD---------- 133

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN+ TL   +  CGAL   +   ++ A   +     D  V +ALVDM+ +CG ++
Sbjct: 134 ---SWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 190

Query: 557 FARR-------------------------------VFDLMPVRNVITWNVIIMAYGMHGE 585
            A R                               +FD MP R+V++WN+++ A    G 
Sbjct: 191 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 250

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E L+++ +M ++G     V+ +  T+ +   AC+    +  G  L  ++  +    P 
Sbjct: 251 VREALDMVVDMQSKG-----VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PH 302

Query: 646 PDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            D Y  + +V+L  ++G  ++A  + N +    +   AW+ L+
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV--AWTVLI 343



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 44/268 (16%)

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-- 568
           L  CGA  ALA  + +H   +   LA+ V + + L+  Y  CG L+ ARR+  LM +   
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLL-LMDIAHP 69

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEG---------------------------S 601
           NVIT NV++  Y   G   + +EL   M A                              
Sbjct: 70  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
           R G+  PN  T      +C   G  S  + L   M   +  +   +  A +VD+  R G 
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 188

Query: 662 VEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF--LLEPDVASHYV 717
           V+ A +L   +  P  F +    S L G  + +     G   A  LF  + E DV S  +
Sbjct: 189 VDLASRLFVRIKEPTMFCRN---SMLAGYVKTY-----GVDHALELFDSMPERDVVSWNM 240

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           ++S +  S ++  +A+D+   M+  GVR
Sbjct: 241 MVSALSQSGRV-REALDMVVDMQSKGVR 267


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/791 (34%), Positives = 425/791 (53%), Gaps = 56/791 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ +  ++I  +++M R  I+ D   F  +LK  + ++D SLG QIH  V
Sbjct: 105 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G   + V  A+ L++MY K G    +  +VF  I EK+ VSW+++IA   +     L
Sbjct: 165 VRVGCD-TDVVAASALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F+ M   N   S     SV  +C+ LS    LRLG Q+H ++L+     +  +  A
Sbjct: 223 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSE---LRLGGQLHAHALKSDFAADGIVRTA 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK   + DA+ LF + E+ +  S+N +++  SQ +   +A++   ++   G+  D
Sbjct: 280 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 339

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++ V  AC+ ++ L  G +I+  A+++ + +D   V +A +DMY  C+ +    RVF
Sbjct: 340 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC-VANAAIDMYGKCQALAEAFRVF 398

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  +    WNA+I  + QN    E L LF+ M   + + P+  T  S++ AC      
Sbjct: 399 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTGGSLG 457

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE----ISKTIFDDMEVRDT------ 452
              E IH   +K G+  +  V  +L+DMYS+ G IE    I    F    V  T      
Sbjct: 458 YGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 516

Query: 453 ----------VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
                     VSWN++I+GY +  Q  DA ML   M  M                    P
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----------------ITP 559

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +  T  TVL  C  L++   GK+IHA  I+  L +DV + S LVDMY+KCG L+ +R +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 619

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           +    R+ +TWN +I  Y  HG+G+E ++L + M+ E      +KPN VTFI++  AC+H
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-----IKPNHVTFISILRACAH 674

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            G++ +G++ FY MK DYG++P   HY+ +VD+LG++GKV+ A +LI  MP E D    W
Sbjct: 675 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IW 733

Query: 683 SSLLGACRIHQN-VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
            +LLG C IH+N VE+ E A   L  L+P  +S Y LLSN+Y+ A +W+K  D+R+ M+ 
Sbjct: 734 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 793

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             ++KEPGCSW+E  DE+H FL GD +H + E+++  L  +   M+      D+S V   
Sbjct: 794 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFVRGV 850

Query: 802 VNEEEKETLLC 812
             EEE +   C
Sbjct: 851 EVEEEDQWCYC 861



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 171/625 (27%), Positives = 291/625 (46%), Gaps = 60/625 (9%)

Query: 64  SYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           ++  M  S  +P  F    +L+     +D      + A +V     L  V   N ++N Y
Sbjct: 28  AHAHMIISGFRPTTFVLNCLLQVYTNSRDF-----VSASMVFDKMPLRDVVSWNKMINGY 82

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
            K  +DM+     F+ +  +D VSWNSM++   + G+   ++E F  M    +E    T 
Sbjct: 83  SK-SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 141

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
             +   CS L   +   LG Q+HG  +RVG + +    +AL+ MYAK  R  ++  +F+ 
Sbjct: 142 AIILKVCSFL---EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 198

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +++ VSW+ I++   QN+    A+ F ++M            ASVL +C+ L  L  G
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
            ++HA+AL++D   D   V +A +DMY  C  ++  + +FD   +     +NAMITGY Q
Sbjct: 259 GQLHAHALKSDFAADG-IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
            E+  +AL+LF ++   +GL  +  ++S V  AC   +   +   I+G AIK  L  D  
Sbjct: 318 EEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 376

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V NA +DMY +   +  +  +FD+M  RD VSWN +I  +   G+  + L L   M    
Sbjct: 377 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS- 435

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                           R +P+  T  ++L  C    +L  G EIH+  +++ +A++  VG
Sbjct: 436 ----------------RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 478

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVR-NV-------------------ITWNVIIMAYGM 582
            +L+DMY+KCG +  A ++      R NV                   ++WN II  Y M
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
             + ++   L   M+  G     + P++ T+  +   C++      G  +  ++      
Sbjct: 539 KEQSEDAQMLFTRMMEMG-----ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK--- 590

Query: 643 EPSPDHYAC--VVDLLGRAGKVEDA 665
           E   D Y C  +VD+  + G + D+
Sbjct: 591 ELQSDVYICSTLVDMYSKCGDLHDS 615



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 252/514 (49%), Gaps = 40/514 (7%)

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNT 217
           G  +L  +A   M+ S   P++F L  +    +N   RD +          LR V  WN 
Sbjct: 20  GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN--SRDFVSASMVFDKMPLRDVVSWNK 77

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            I       Y+K   +  A + F     RD+VSWN+++S   QN + L+++     M   
Sbjct: 78  MING-----YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV-GSALVDMYCNCREVE 336
           GI+ DG + A +L  CS LE    G +IH   +R  +  D   V  SAL+DMY   +   
Sbjct: 133 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR--VGCDTDVVAASALLDMYAKGKRFV 190

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-AGLWPNATTMSSVVPA 395
              RVF  I +K    W+A+I G  QN     AL  F +M++V AG+  + +  +SV+ +
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--SQSIYASVLRS 248

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C           +H HA+K     D  V+ A +DMY++   ++ ++ +FD+ E  +  S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 456 NTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           N MITGY+   +HG  AL+L   +         ++    DE         I+L  V   C
Sbjct: 309 NAMITGYSQ-EEHGFKALLLFHRLM--------SSGLGFDE---------ISLSGVFRAC 350

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             +  L++G +I+  AI++ L+ DV V +A +DMY KC  L  A RVFD M  R+ ++WN
Sbjct: 351 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 410

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II A+  +G+G E L L  +M+        ++P+E TF ++  AC+  G +  GM++  
Sbjct: 411 AIIAAHEQNGKGYETLFLFVSMLR-----SRIEPDEFTFGSILKACT-GGSLGYGMEIHS 464

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            +    G+  +      ++D+  + G +E+A ++
Sbjct: 465 SIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 497



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 18/198 (9%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C +  A    +  H H I  G     +V N L+ +Y+       +  +FD M +RD VSW
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 456 NTMITGYTICGQHGDA-----LMLLRE-----------MQNMEEEKNRNNVYDLDETVLR 499
           N MI GY+       A     +M +R+           +QN E  K+     D+    + 
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI- 134

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            + +  T   +L  C  L   + G +IH   +R    TDVV  SAL+DMYAK      + 
Sbjct: 135 -EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193

Query: 560 RVFDLMPVRNVITWNVII 577
           RVF  +P +N ++W+ II
Sbjct: 194 RVFQGIPEKNSVSWSAII 211



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 39/213 (18%)

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           MT    C    AL  GK+ HA+ I +       V + L+ +Y        A  VFD MP+
Sbjct: 10  MTRSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL 69

Query: 568 RNVITWNVIIMAYG-------------------------------MHGEGQEVLELLKNM 596
           R+V++WN +I  Y                                 +GE  + +E+  +M
Sbjct: 70  RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 129

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
             EG     ++ +  TF  +   CS     S GM + + +    G +      + ++D+ 
Sbjct: 130 GREG-----IEFDGRTFAIILKVCSFLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMY 183

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
            +  +  ++ ++   +P +   + +WS+++  C
Sbjct: 184 AKGKRFVESLRVFQGIPEK--NSVSWSAIIAGC 214


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/791 (34%), Positives = 425/791 (53%), Gaps = 56/791 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ +  ++I  +++M R  I+ D   F  +LK  + ++D SLG QIH  V
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G   + V  A+ L++MY K G    +  +VF  I EK+ VSW+++IA   +     L
Sbjct: 207 VRVGCD-TDVVAASALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F+ M   N   S     SV  +C+ LS    LRLG Q+H ++L+     +  +  A
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSE---LRLGGQLHAHALKSDFAADGIVRTA 321

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK   + DA+ LF + E+ +  S+N +++  SQ +   +A++   ++   G+  D
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++ V  AC+ ++ L  G +I+  A+++ + +D   V +A +DMY  C+ +    RVF
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC-VANAAIDMYGKCQALAEAFRVF 440

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  +    WNA+I  + QN    E L LF+ M   + + P+  T  S++ AC      
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTGGSLG 499

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE----ISKTIFDDMEVRDT------ 452
              E IH   +K G+  +  V  +L+DMYS+ G IE    I    F    V  T      
Sbjct: 500 YGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558

Query: 453 ----------VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
                     VSWN++I+GY +  Q  DA ML   M  M                    P
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----------------ITP 601

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +  T  TVL  C  L++   GK+IHA  I+  L +DV + S LVDMY+KCG L+ +R +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           +    R+ +TWN +I  Y  HG+G+E ++L + M+ E      +KPN VTFI++  AC+H
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-----IKPNHVTFISILRACAH 716

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            G++ +G++ FY MK DYG++P   HY+ +VD+LG++GKV+ A +LI  MP E D    W
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IW 775

Query: 683 SSLLGACRIHQN-VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
            +LLG C IH+N VE+ E A   L  L+P  +S Y LLSN+Y+ A +W+K  D+R+ M+ 
Sbjct: 776 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 835

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             ++KEPGCSW+E  DE+H FL GD +H + E+++  L  +   M+      D+S V   
Sbjct: 836 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFVRGV 892

Query: 802 VNEEEKETLLC 812
             EEE +   C
Sbjct: 893 EVEEEDQWCYC 903



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 178/646 (27%), Positives = 295/646 (45%), Gaps = 87/646 (13%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG----------------------- 109
           +   NF+F  V K  A    L LGKQ HAH++  G+                        
Sbjct: 46  VSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103

Query: 110 -------LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
                  L  V   N ++N Y K  +DM+     F+ +  +D VSWNSM++   + G+  
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSK-SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            ++E F  M    +E    T   +   CS L   +   LG Q+HG  +RVG + +    +
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFL---EDTSLGMQIHGIVVRVGCDTDVVAAS 219

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MYAK  R  ++  +F+   +++ VSW+ I++   QN+    A+ F ++M       
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
                ASVL +C+ L  L  G ++HA+AL++D   D   V +A +DMY  C  ++  + +
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG-IVRTATLDMYAKCDNMQDAQIL 338

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD   +     +NAMITGY Q E+  +AL+LF ++   +GL  +  ++S V  AC   + 
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKG 397

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             +   I+G AIK  L  D  V NA +DMY +   +  +  +FD+M  RD VSWN +I  
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G+  + L L   M                    R +P+  T  ++L  C    +L 
Sbjct: 458 HEQNGKGYETLFLFVSMLRS-----------------RIEPDEFTFGSILKACTG-GSLG 499

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NV---------- 570
            G EIH+  +++ +A++  VG +L+DMY+KCG +  A ++      R NV          
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559

Query: 571 ---------ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
                    ++WN II  Y M  + ++   L   M+  G     + P++ T+  +   C+
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----ITPDKFTYATVLDTCA 614

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDA 665
           +      G  +  ++      E   D Y C  +VD+  + G + D+
Sbjct: 615 NLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS 657



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 252/514 (49%), Gaps = 40/514 (7%)

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNT 217
           G  +L  +A   M+ S   P++F L  +    +N   RD +          LR V  WN 
Sbjct: 62  GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN--SRDFVSASMVFDKMPLRDVVSWNK 119

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            I       Y+K   +  A + F     RD+VSWN+++S   QN + L+++     M   
Sbjct: 120 MING-----YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV-GSALVDMYCNCREVE 336
           GI+ DG + A +L  CS LE    G +IH   +R  +  D   V  SAL+DMY   +   
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR--VGCDTDVVAASALLDMYAKGKRFV 232

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-AGLWPNATTMSSVVPA 395
              RVF  I +K    W+A+I G  QN     AL  F +M++V AG+  + +  +SV+ +
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--SQSIYASVLRS 290

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C           +H HA+K     D  V+ A +DMY++   ++ ++ +FD+ E  +  S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350

Query: 456 NTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           N MITGY+   +HG  AL+L   +         ++    DE         I+L  V   C
Sbjct: 351 NAMITGYSQ-EEHGFKALLLFHRLM--------SSGLGFDE---------ISLSGVFRAC 392

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             +  L++G +I+  AI++ L+ DV V +A +DMY KC  L  A RVFD M  R+ ++WN
Sbjct: 393 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 452

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II A+  +G+G E L L  +M+        ++P+E TF ++  AC+  G +  GM++  
Sbjct: 453 AIIAAHEQNGKGYETLFLFVSMLR-----SRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            +    G+  +      ++D+  + G +E+A ++
Sbjct: 507 SIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/779 (33%), Positives = 406/779 (52%), Gaps = 105/779 (13%)

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED-------- 245
           RR  L+L R VHGN +  G +    I+N L+ +Y K   ++ A+ LF    +        
Sbjct: 26  RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85

Query: 246 -------------------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
                                    RD V +N +++  S N+    A+    +M   G K
Sbjct: 86  MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 281 PDGVSIASVLPACSHLEMLDTGKE---IHAYALRNDILIDNSFVGSALVDMYCNCRE--- 334
           PD  + ASVL   + +   D  K+    HA AL++      S V +ALV +Y  C     
Sbjct: 146 PDNFTFASVLAGLALVA--DDEKQCVQFHAAALKSGAGYITS-VSNALVSVYSKCASSPS 202

Query: 335 -VECGRRVFDFISDK--------------------------------KIALWNAMITGYG 361
            +   R+VFD I +K                                K+  +NAMI+GY 
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
              + +EAL +  +M   +G+  +  T  SV+ AC  +      + +H + ++    R+ 
Sbjct: 263 NRGFYQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR----RED 317

Query: 422 Y---VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           +     N+L+ +Y + G+ + ++ IF+ M  +D VSWN +++GY   G  G+A ++ +EM
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377

Query: 479 Q------------NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGK 524
           +             + E         L   + R   +P        +  C  L A   G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           + HA  ++    + +  G+AL+ MYAKCG +  AR+VF  MP  + ++WN +I A G HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G E +++ + M+ +G     ++P+ +T + +  ACSH+G+V +G   F  M+  Y I P
Sbjct: 498 HGAEAVDVYEEMLKKG-----IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             DHYA ++DLL R+GK  DA  +I  +P +   A  W +LL  CR+H N+E+G IAA  
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFK-PTAEIWEALLSGCRVHGNMELGIIAADK 611

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           LF L P+    Y+LLSN++++   W++   VRK M++ GV+KE  CSWIE   ++H FL 
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE-EKETLLCGHSEKLAIAFG 823
            D SH ++E ++ +L++L + MR+ GYVPDTS VLH+V  +  KE +L  HSEK+A+AFG
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++  PPGTTIR+ KNLR C DCH   +F+S +  R+IILRD +RFHHF+NG CSCG++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 225/494 (45%), Gaps = 92/494 (18%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAHVVKYGYGLS 111
           + +N    AI  + +M     +PDNF F +VL  +A +  D     Q HA  +K G G  
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183

Query: 112 SVTVANTLVNMYGKCGSD---MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL----- 163
           + +V+N LV++Y KC S    +    KVFD I EKD+ SW +M+    + G +DL     
Sbjct: 184 T-SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242

Query: 164 ---------------------------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
                                      ALE  R M+ S +E   FT  SV  AC+     
Sbjct: 243 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL- 301

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
             L+LG+QVH   LR  +++    N+L+++Y K G+ D+A+ +F+    +DLVSWN ++S
Sbjct: 302 --LQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359

Query: 257 SLSQNDKFLEAVMFLRQMALR-------------------------------GIKPDGVS 285
               +    EA +  ++M  +                               G +P   +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDF 344
            +  + +C+ L     G++ HA  L+  I  D+S   G+AL+ MY  C  VE  R+VF  
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----- 399
           +       WNA+I   GQ+ +  EA+ ++ +M +  G+ P+  T+ +V+ AC  +     
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQ 536

Query: 400 --EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
             + F   E ++    ++  G D Y +  L+D+  R G+   ++++ + +  + T   W 
Sbjct: 537 GRKYFDSMETVY----RIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590

Query: 457 TMITGYTICGQHGD 470
            +++G   C  HG+
Sbjct: 591 ALLSG---CRVHGN 601



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 247/596 (41%), Gaps = 129/596 (21%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L L + +H +++ +G+      + N L+++Y K  S++    ++FD I+E D+++  +M+
Sbjct: 30  LQLARAVHGNIITFGFQ-PRAHILNRLIDVYCK-SSELNYARQLFDEISEPDKIARTTMV 87

Query: 153 ATLCRFGKWDLA---------------------------------LEAFRMMLYSNVEPS 179
           +  C  G   LA                                 +  F  M +   +P 
Sbjct: 88  SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGR----VD 234
           +FT  SV    + ++  D  +   Q H  +L+ G  + T + NAL+++Y+K       + 
Sbjct: 148 NFTFASVLAGLALVA--DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKF------------------------------ 264
            A+ +F    ++D  SW T+++   +N  F                              
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265

Query: 265 --LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-V 321
              EA+  +R+M   GI+ D  +  SV+ AC+   +L  GK++HAY LR +   D SF  
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE---DFSFHF 322

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY--------------------- 360
            ++LV +Y  C + +  R +F+ +  K +  WNA+++GY                     
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 361 ----------GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
                      +N + EE L LF  M+   G  P     S  + +C    A+ + +  H 
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
             +K+G        NAL+ MY++ G +E ++ +F  M   D+VSWN +I      GQHG 
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL---GQHGH 498

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAY 529
                 E  ++ EE  +  +          +P+ ITL+TVL  C     + +G++   + 
Sbjct: 499 GA----EAVDVYEEMLKKGI----------RPDRITLLTVLTACSHAGLVDQGRKYFDSM 544

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI-TWNVIIMAYGMHG 584
                +       + L+D+  + G  + A  V + +P +     W  ++    +HG
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  +   A +    E +  +  M R   +P ++AF   +K+ A +     G+Q HA +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  SS++  N L+ MY KCG  + +  +VF  +   D VSWN++IA L + G    
Sbjct: 444 LKIGFD-SSLSAGNALITMYAKCGV-VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++ +  ML   + P   TL++V  ACS+
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSH 530


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/706 (36%), Positives = 378/706 (53%), Gaps = 40/706 (5%)

Query: 203 RQVHGNSLRVGEW-------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
           +Q+H + LR G +         F   AL    +    +D A  +F      +L +WNT++
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFDQIPRPNLYTWNTLI 102

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
            + + + K ++ ++   QM     + P+  +   V+ A + +  L  G+ IH   ++   
Sbjct: 103 RAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASF 162

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             D  F+ ++L+  Y +  +++    VF  I +K I  WN+MI+G+ Q    EEAL LF 
Sbjct: 163 GSD-LFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M+ +    PN  TM  V+ AC +            +  + G+  +  + NA++DMY + 
Sbjct: 222 RMK-MENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKC 280

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL---------------MLLREMQ 479
           G +E ++ +FD ME +D VSW TMI GY   G +  A                 L+   Q
Sbjct: 281 GSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQ 340

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
              + K    ++   +     KPN +TL + L  C  L A+  G  IH Y  +  +  + 
Sbjct: 341 QNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNF 400

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + ++L+DMY+KCG L  A  VF  +  R+V  W+ +I    MHG G+  ++L   M   
Sbjct: 401 HITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKM--- 457

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
             +  +VKPN VTF  L  ACSHSG+V EG   F +M+  YG+ P   HYAC+VD+LGRA
Sbjct: 458 --QETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRA 515

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH--YV 717
           G +E+A +LI  MP     A  W +LLGACRI+ NVE+ E+A     LLE D  +H  YV
Sbjct: 516 GCLEEAVELIEKMPI-VPSASVWGALLGACRIYGNVELAEMACSR--LLETDSNNHGAYV 572

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LLSNIY+ A  WD    +R+ MK  G+ KEPGCS IE    IH+FL GD SH  S +++ 
Sbjct: 573 LLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYS 632

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            L+ +  R++  GYV D S +L  V EE  KE  L  HSEKLAIA+G++   P   IR+ 
Sbjct: 633 KLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIV 692

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH   K ISK+ +R+I+LRD  RFHHF  G CSC DYW
Sbjct: 693 KNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 239/492 (48%), Gaps = 57/492 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +R+ A S +  + +L +I+M   S   P+++ FP V+KA   +  L  G+ IH  
Sbjct: 97  TWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGM 156

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K  +G S + ++N+L++ Y   G D+   Y VF +I EKD VSWNSMI+   + G  +
Sbjct: 157 VMKASFG-SDLFISNSLIHFYSSLG-DLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPE 214

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            AL+ F+ M   N  P+  T+V V  AC   ++R  L  GR       R G + N  + N
Sbjct: 215 EALQLFKRMKMENARPNRVTMVGVLSAC---AKRIDLEFGRWACDYIERNGIDINLILSN 271

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVS------------------------------- 250
           A++ MY K G ++DA+ LF   E++D+VS                               
Sbjct: 272 AMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITA 331

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           WN ++SS  QN K  EA+   R++ L +  KP+ V++AS L AC+ L  +D G  IH Y 
Sbjct: 332 WNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYI 391

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
            +  I + N  + ++L+DMY  C  +E    VF  +  + + +W+AMI G   + +   A
Sbjct: 392 KKQGIKL-NFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAA 450

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEA-------FPDKEGIHGHAIKLGLGRDRY 422
           + LF KM+E   + PNA T ++++ AC  S         F     ++G    +  G   Y
Sbjct: 451 IDLFSKMQETK-VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYG----VVPGSKHY 505

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNM 481
               ++D+  R G +E +  + + M +  + S W  ++    I G    A M    +  +
Sbjct: 506 A--CMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRL--L 561

Query: 482 EEEKNRNNVYDL 493
           E + N +  Y L
Sbjct: 562 ETDSNNHGAYVL 573



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 240/526 (45%), Gaps = 62/526 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HAH+++ G      +             S +    KVFD+I   +  +WN++I    
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 157 RFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              K    L  F  ML+ S   P+S+T   V  A + +S    L  G+ +HG  ++    
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS---SLLAGQAIHGMVMKASFG 163

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + FI N+L+  Y+ LG +D A  +F    ++D+VSWN+++S   Q     EA+   ++M
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            +   +P+ V++  VL AC+    L+ G+    Y  RN I I N  + +A++DMY  C  
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI-NLILSNAMLDMYVKCGS 282

Query: 335 VE-------------------------------CGRRVFDFISDKKIALWNAMITGYGQN 363
           +E                                 RRVFD +  + I  WNA+I+ Y QN
Sbjct: 283 LEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQN 342

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
              +EAL +F +++      PN  T++S + AC +  A      IH +  K G+  + ++
Sbjct: 343 GKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHI 402

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
             +L+DMYS+ G +E +  +F  +E RD   W+ MI G  + G    A+ L  +MQ    
Sbjct: 403 TTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQ---- 458

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                      ET  + KPN++T   +L  C   S L     +    +R +    VV GS
Sbjct: 459 -----------ET--KVKPNAVTFTNLLCACSH-SGLVDEGRLFFNQMRPVYG--VVPGS 502

Query: 544 ----ALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHG 584
                +VD+  + GCL  A  + + MP V +   W  ++ A  ++G
Sbjct: 503 KHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYG 548


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/600 (40%), Positives = 354/600 (59%), Gaps = 34/600 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE----VECGRRVFD 343
           S+L  C+ L  L   K+I AY ++ ++  D S V + L++ +C        ++    +FD
Sbjct: 34  SLLSKCTSLNEL---KQIQAYTIKTNLQSDIS-VLTKLIN-FCTLNPTTSYMDHAHHLFD 88

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I DK I L+N M  GY ++     A  LF ++   +GL P+  T SS++ AC  S+A  
Sbjct: 89  QILDKDIILFNIMARGYARSNSPYLAFSLFGELL-CSGLLPDDYTFSSLLKACASSKALR 147

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           +  G+H  A+KLGL  + Y+   L++MY+    +  ++ +FD+ME    VS+N +ITGY 
Sbjct: 148 EGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYA 207

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              Q  +AL L RE+Q    E                 P  +T+++V+  C  L AL  G
Sbjct: 208 RSSQPNEALSLFRELQASNIE-----------------PTDVTMLSVIMSCALLGALDLG 250

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K IH Y  +      V V +AL+DM+AKCG L  A  +F+ M VR+   W+ +I+A+  H
Sbjct: 251 KWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATH 310

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G+G + + + + M  EG     V+P+E+TF+ L  ACSH+G+V +G   FY M   YGI 
Sbjct: 311 GDGLKAISMFEEMKREG-----VRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGIT 365

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P   HY C+VDLLGRAG +++AY  ++ +  +      W +LL AC  H NVE+ +   +
Sbjct: 366 PGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPI-LWRTLLSACSTHGNVEMAKRVIE 424

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            +F L+      YV+LSN+Y+    W+    +RK MK+ GV K PGCS +E  + +H+F 
Sbjct: 425 RIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFF 484

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGHSEKLAIAF 822
           +GDG H  S +L   L+ L + ++  GYVPDTS V H ++ EE KE +L  HSEKLA+AF
Sbjct: 485 SGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAF 544

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           G+LNTPPGTTIRVAKNLR+C DCH A K IS I  R+I++RDV+RFH F++G CSCGD+W
Sbjct: 545 GLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 139/255 (54%), Gaps = 6/255 (2%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  ARSN    A   + E+  S + PD++ F ++LKA A  + L  G  +H   VK G  
Sbjct: 103 RGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLN 162

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             ++ +  TL+NMY +C +DM     VFD + +   VS+N++I    R  + + AL  FR
Sbjct: 163 -HNIYICPTLINMYAEC-NDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYA 228
            +  SN+EP+  T++SV ++C+ L   D   LG+ +H    + G      +N AL+ M+A
Sbjct: 221 ELQASNIEPTDVTMLSVIMSCALLGALD---LGKWIHEYVKKKGFDKYVKVNTALIDMFA 277

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G + DA ++F+    RD  +W+ ++ + + +   L+A+    +M   G++PD ++   
Sbjct: 278 KCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLG 337

Query: 289 VLPACSHLEMLDTGK 303
           +L ACSH  +++ G+
Sbjct: 338 LLYACSHAGLVEQGR 352



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 188/393 (47%), Gaps = 16/393 (4%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNM--YGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           KQI A+ +K     S ++V   L+N        S M   + +FD+I +KD + +N M   
Sbjct: 46  KQIQAYTIKTNLQ-SDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARG 104

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             R     LA   F  +L S + P  +T  S+  AC++      LR G  +H  ++++G 
Sbjct: 105 YARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACAS---SKALREGMGLHCFAVKLGL 161

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             N +I   L+ MYA+   ++ A+ +F   E   +VS+N I++  +++ +  EA+   R+
Sbjct: 162 NHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRE 221

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNC 332
           +    I+P  V++ SV+ +C+ L  LD GK IH Y  +     D    V +AL+DM+  C
Sbjct: 222 LQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKG--FDKYVKVNTALIDMFAKC 279

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +     +F+ +  +    W+AMI  +  +    +A+ +F +M+   G+ P+  T   +
Sbjct: 280 GSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKR-EGVRPDEITFLGL 338

Query: 393 VPACVRSEAFPDKEG-IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           + AC  +       G  +  +   G+         ++D+  R G ++ +    D +E++ 
Sbjct: 339 LYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKA 398

Query: 452 T-VSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           T + W T+++    C  HG+  M  R ++ + E
Sbjct: 399 TPILWRTLLSA---CSTHGNVEMAKRVIERIFE 428



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 30/235 (12%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C  S+   +   ARS+Q  EA+  + E+  S+I+P +    +V+ + A +  L LGK IH
Sbjct: 195 CIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIH 254

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V K G+    V V   L++M+ KCGS + D   +F+ +  +D  +W++MI      G 
Sbjct: 255 EYVKKKGFD-KYVKVNTALIDMFAKCGS-LTDAISIFEGMRVRDTQAWSAMIVAFATHGD 312

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSN-------------LSRRDGLRLGRQVHG 207
              A+  F  M    V P   T + +  ACS+             +S+  G+  G + +G
Sbjct: 313 GLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYG 372

Query: 208 NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL-VSWNTIVSSLSQN 261
                          ++ +  + G +D+A       E +   + W T++S+ S +
Sbjct: 373 --------------CMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTH 413


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 288/857 (33%), Positives = 442/857 (51%), Gaps = 51/857 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA--GIQDLSLGKQIHA 101
            SW   +   A + + RE       M    I+PD      +L   +  G+ D       H 
Sbjct: 298  SWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDED-SWMAHD 356

Query: 102  HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD-QV--SWNSMIATLCRF 158
            ++V  G    +V VA  L++M+ +CG  +    ++F+++ +   QV   WN+MI      
Sbjct: 357  YIVGGGLDREAV-VATALLSMFARCGR-VDKAREIFEKVADHSAQVIECWNAMITAYAHR 414

Query: 159  GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
            G    AL     +    V+P+  T +S   ACS+L  +DG  L   +H +     +    
Sbjct: 415  GCSKEALFLLDSLQLQGVKPNCITFISSLGACSSL--QDGRALHLLIHESGF---DQEVS 469

Query: 219  IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            + NAL+ MY K G + D+  LF    ++DL SWN+ +++ S + +  E +  L QM   G
Sbjct: 470  VANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEG 529

Query: 279  IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
               + V+  + L +C+    L  G  +H   ++     D + V SA+++MY  C  ++  
Sbjct: 530  FLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEAD-TVVASAVINMYGRCGGLDRA 588

Query: 339  RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R +F  +    + LW  M+T Y Q    ++ +  F  M    GL P   T+ +++     
Sbjct: 589  REIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLH-EGLKPTGVTLVNLITCVAD 647

Query: 399  S--EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
            S  E F D   I   A + GL  +  V N+L++M+S    +  ++ IFD    +      
Sbjct: 648  SGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHT 707

Query: 457  TMITGYTICGQHGD--ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            TM+  Y + G+ G   AL L   M              L E +   +P+S+TL+T +  C
Sbjct: 708  TMLAAY-VKGERGKEAALTLFARM--------------LLEGL---EPSSVTLVTAMSAC 749

Query: 515  GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            G L+  +  K +H  A    L ++  V + LVDMY K G ++ AR +FD    RNV TWN
Sbjct: 750  GGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWN 809

Query: 575  VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
             +  AY   G  + VL L++ M  +G R     P+ VTF++L + C HSG++ E    F 
Sbjct: 810  AMAGAYRQCGVTRGVLWLVRTMQRDGYR-----PDSVTFVSLLSVCGHSGLLEEARYNFV 864

Query: 635  KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-WSSLLGACR--- 690
             M+ ++GI+PSP HY+CV+DLL RAG+++ A   I  +      +   W +LLGACR   
Sbjct: 865  AMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLG 924

Query: 691  -IHQNVEIGEIAAQNLFLLEP----DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
                        A ++  +EP    D ++ +V L+NI +++  WD+A+ +RK M E G+R
Sbjct: 925  NSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLR 984

Query: 746  KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
            KEPG S I   + +H+F+AGD  H + E+++  L  L   M   GYV DT  V HNV E 
Sbjct: 985  KEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEA 1044

Query: 806  EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
            +K  LL  HSEKLA+AFG+L+TPPG+++R+ KNLR C DCH A K IS IE REI++RD 
Sbjct: 1045 DKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDS 1104

Query: 866  RRFHHFKNGTCSCGDYW 882
             RFHHF+NG+CSCGDYW
Sbjct: 1105 NRFHHFRNGSCSCGDYW 1121



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 232/859 (27%), Positives = 393/859 (45%), Gaps = 92/859 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L +   +    +A+  + +M ++ ++PD   +  +LK    + DL+ GK++HA +
Sbjct: 89  SWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQI 148

Query: 104 VKYGYGL------SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            + G  L       +  + N LV MYGKCG    +  + FD I  K+  SW S++     
Sbjct: 149 RESGLLLDDREESGARFLGNCLVQMYGKCGRTD-EAQRAFDSIAHKNIFSWTSILVAYFH 207

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWN 216
            G    ALE F  M+ + VEP     ++    C  L R  DG  + RQ+    L   + +
Sbjct: 208 AGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPL---DSD 264

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             I NAL++MY K GR+D AK LF   E R+++SW  +VS  ++N +  E    LR MA+
Sbjct: 265 LEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAV 324

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GIKPD V + ++L  CS   +LD    +    +    L   + V +AL+ M+  C  V+
Sbjct: 325 EGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVD 384

Query: 337 CGRRVFDFISD---KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
             R +F+ ++D   + I  WNAMIT Y      +EAL L   + ++ G+ PN  T  S +
Sbjct: 385 KAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL-QLQGVKPNCITFISSL 443

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC    +  D   +H    + G  ++  V NAL+ MY + G +  S  +F +M  +D  
Sbjct: 444 GAC---SSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLA 500

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN+ I  ++  G+  + + LL +M+               E  L  K   +T +T L  
Sbjct: 501 SWNSAIAAHSYHGRSDECIKLLDQMRG--------------EGFLYEK---VTFLTALNS 543

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C   ++L  G  +H   ++     D VV SA+++MY +CG L+ AR +F  +   +VI W
Sbjct: 544 CTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILW 603

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM--VSEGMD 631
             ++  Y   G  ++V+E  ++M+ EG     +KP  VT + L    + SG+    +G+ 
Sbjct: 604 TGMLTVYCQLGRTKQVMEHFRSMLHEG-----LKPTGVTLVNLITCVADSGLEHFRDGV- 657

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
               +  + G+E        ++++      +  A  + +  P +       +++L A   
Sbjct: 658 WISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEK--SVALHTTMLAA--- 712

Query: 692 HQNVEIGEIAAQNLF---LLEPDVASHYVLLSNIYSSAQLWD--KAMDVRKKMKEMGVRK 746
           +   E G+ AA  LF   LLE    S   L++ + +   L D   +  V ++ +E+G+  
Sbjct: 713 YVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLES 772

Query: 747 EPGCS------WIEFGD--------------EIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           E   +      + + GD               +  + A  G+++Q     G L  L   M
Sbjct: 773 ETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLW-LVRTM 831

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA----------FGILNTPPGTTIRVA 836
           +++GY PD+   +  ++       +CGHS  L  A          FGI  +P   +  V 
Sbjct: 832 QRDGYRPDSVTFVSLLS-------VCGHSGLLEEARYNFVAMRREFGIDPSPKHYSC-VI 883

Query: 837 KNLRVCNDCHQATKFISKI 855
             L    +  QA  FI++I
Sbjct: 884 DLLARAGELQQAEDFIARI 902



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 176/649 (27%), Positives = 302/649 (46%), Gaps = 49/649 (7%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL------SSVTVANTLVN 121
           ++RS +     ++  +LK    + DL+ GK++HA + + G  L       +  + N LV 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MYGKCG    +  + FD I  K+  SW S++      G    ALE F  M+ + VEP   
Sbjct: 65  MYGKCGRTD-EAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRL 123

Query: 182 TLVSVALACSNLSR-RDGLRLGRQVHGNSL----RVGEWNTFIMNALMAMYAKLGRVDDA 236
               +   C  L     G RL  Q+  + L    R      F+ N L+ MY K GR D+A
Sbjct: 124 VYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 183

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           +  F S   +++ SW +I+ +        +A+    QM   G++PD +   + L  C  L
Sbjct: 184 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 243

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           + L+ G  IH   +++  L  +  +G+ALV MY  C  ++  + +FD +  + +  W  +
Sbjct: 244 KRLEDGAGIH-RQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTIL 302

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIK 414
           ++ + +N    E   L   M  V G+ P+   + +++  C  S    D++    H + + 
Sbjct: 303 VSVFAENGRRRETWGLLRSM-AVEGIKPDKVLLLTLLNVC-SSRGVLDEDSWMAHDYIVG 360

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFD---DMEVRDTVSWNTMITGYTICGQHGDA 471
            GL R+  V  AL+ M++R GR++ ++ IF+   D   +    WN MIT Y   G   +A
Sbjct: 361 GGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEA 420

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L LL  +Q                 +   KPN IT ++ L   GA S+L  G+ +H    
Sbjct: 421 LFLLDSLQ-----------------LQGVKPNCITFISSL---GACSSLQDGRALHLLIH 460

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
            +    +V V +ALV MY KCG L  + ++F  M  +++ +WN  I A+  HG   E ++
Sbjct: 461 ESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIK 520

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
           LL  M  EG         +VTF+    +C+    + +G+ L ++     G E      + 
Sbjct: 521 LLDQMRGEG-----FLYEKVTFLTALNSCTDPASLQDGV-LMHEKIVQCGYEADTVVASA 574

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA-CRIHQNVEIGE 699
           V+++ GR G ++ A ++   +   FD    W+ +L   C++ +  ++ E
Sbjct: 575 VINMYGRCGGLDRAREIFTRVKT-FDVI-LWTGMLTVYCQLGRTKQVME 621



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 251/522 (48%), Gaps = 34/522 (6%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           E W   + + A     +EA+     +    ++P+   F + L A + +QD   G+ +H  
Sbjct: 402 ECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLL 458

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + + G+    V+VAN LV MYGKCGS + D  K+F  + EKD  SWNS IA     G+ D
Sbjct: 459 IHESGFD-QEVSVANALVTMYGKCGS-LLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSD 516

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             ++    M          T ++   +C++ +    L+ G  +H   ++ G E +T + +
Sbjct: 517 ECIKLLDQMRGEGFLYEKVTFLTALNSCTDPA---SLQDGVLMHEKIVQCGYEADTVVAS 573

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A++ MY + G +D A+ +F   +  D++ W  +++   Q  +  + +   R M   G+KP
Sbjct: 574 AVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKP 633

Query: 282 DGVSIASVLP--ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            GV++ +++   A S LE    G  I + A  +  L   + V ++L++M+   R +   R
Sbjct: 634 TGVTLVNLITCVADSGLEHFRDGVWISSLAWESG-LESETMVANSLIEMFSEFRSLSQAR 692

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEE-ALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            +FD   +K +AL   M+  Y + E  +E AL LF +M  + GL P++ T+ + + AC  
Sbjct: 693 AIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARM-LLEGLEPSSVTLVTAMSACGG 751

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
                  + +H  A +LGL  +  V N L+DMY + G ++ ++ IFD    R+  +WN M
Sbjct: 752 LADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAM 811

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
              Y  CG     L L+R MQ       R+            +P+S+T +++L  CG  S
Sbjct: 812 AGAYRQCGVTRGVLWLVRTMQ-------RDGY----------RPDSVTFVSLLSVCGH-S 853

Query: 519 ALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFA 558
            L +    +  A+R     D      S ++D+ A+ G L  A
Sbjct: 854 GLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQA 895


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/820 (32%), Positives = 437/820 (53%), Gaps = 73/820 (8%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RM 170
           +V   N ++N Y K GS + D  ++F R+  +D  SWN++++   + G++  AL+ F  M
Sbjct: 91  NVITHNIMMNGYAKLGS-LSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSM 149

Query: 171 MLYSNVEPSSFTLVSVALACSNL-------------SRRDG--------------LRLGR 203
               +  P++FT   V  +C  L             S+ D               +R G 
Sbjct: 150 RQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209

Query: 204 QVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
               +    R+        N+++  YAK   VD A  +FKS  +RD+VSWN ++S+LS++
Sbjct: 210 MDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS 269

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +  EA+  +  M  +G++PD  +  S L AC+ L  L+ GK++H   +RN   ID  +V
Sbjct: 270 GRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID-PYV 328

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVA 380
            SA+V++Y  C   +  +RVF  + D+    W  +I G+ Q     E++ LF +M  E+ 
Sbjct: 329 ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELM 388

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            +  +   +++++  C  +        +H   +K G  R   V N+L+ MY++ G ++ +
Sbjct: 389 AV--DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA 446

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDA----------------LMLLREMQNMEEE 484
           + IF+ M  RD VSW  MIT Y+  G    A                 ML   +Q+  EE
Sbjct: 447 ELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE 506

Query: 485 KNRNNVYDL--DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                  D+  ++ V+   P+ +T +T+  GC  + A   G +I  + ++  L  D  V 
Sbjct: 507 DGLKMYSDMLTEKDVI---PDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV 563

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +A++ MY+KCG ++ AR+ FD +  +++++WN +I  Y  HG G++ +E+  +++ +G+ 
Sbjct: 564 NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGA- 622

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
               KP+ ++++A+ + CSHSG+V EG   F  MK D+ I P  +H++C+VDLLGRAG +
Sbjct: 623 ----KPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHL 678

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            +A  LI+ MP +   A  W +LL AC+ H N ++ E+AA++LF L+   +  Y+LL+ +
Sbjct: 679 IEAKNLIDEMPMK-PTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKM 737

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A   D +  VRK M++ G++K PG SW+E  + +H F A D SH Q   +   L+ L
Sbjct: 738 YADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDEL 797

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            E++   GYV             E       HSEKLA+AFGI++ P    I + KNLR+C
Sbjct: 798 MEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRIC 846

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +DCH   K IS +  RE ++RD  RFHHFK G+CSC DYW
Sbjct: 847 DDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 263/611 (43%), Gaps = 87/611 (14%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGK 97
           TR   SW   +    +S QF  A+  ++ M ++ D  P+ F F  V+K+   +    +  
Sbjct: 120 TRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVAL 179

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+   + K+        V   LV+M  +CG+ M    K F RI     +  NSM+    +
Sbjct: 180 QLLGLLSKFD-SQDDPDVQTALVDMLVRCGA-MDFASKQFSRIKNPTIICRNSMLVGYAK 237

Query: 158 FGKWDLALEAFRMMLYSN-------------------------------VEPSSFTLVSV 186
               D ALE F+ M   +                               V P S T  S 
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ LS    L  G+Q+H   +R +   + ++ +A++ +YAK G   +AK +F S  D
Sbjct: 298 LTACARLS---SLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+ VSW  ++    Q   F E+V    QM    +  D  ++A+++  C +   +  G ++
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414

Query: 306 HAYALRND----ILIDNSFVG--------------------------SALVDMYCNCREV 335
           H+  L++     +++ NS +                           + ++  Y     +
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R  FD +S + +  WNAM+  Y Q+  +E+ L ++  M     + P+  T  ++   
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C    A    + I GH +K+GL  D  V NA++ MYS+ GRI  ++  FD +  +D VSW
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MITGY+   QHG   M  + ++  ++  N+             KP+ I+ + VL GC 
Sbjct: 595 NAMITGYS---QHG---MGKQAIEIFDDILNKG-----------AKPDYISYVAVLSGCS 637

Query: 516 ALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI-TW 573
               + +GK       R+  ++  +   S +VD+  + G L  A+ + D MP++     W
Sbjct: 638 HSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVW 697

Query: 574 NVIIMAYGMHG 584
             ++ A   HG
Sbjct: 698 GALLSACKTHG 708



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 261/606 (43%), Gaps = 103/606 (16%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  LS  D   L R        + E N    N +M  YAKLG + DA  LF 
Sbjct: 65  TLLHAYLSCGALS--DARNLLRD------EITEPNVITHNIMMNGYAKLGSLSDAVELFG 116

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLD 300
               RD+ SWNTI+S   Q+ +FL A+     M   G   P+  +   V+ +C  L   +
Sbjct: 117 RMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHE 176

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
              ++     + D   D+  V +ALVDM   C  ++   + F  I +  I   N+M+ GY
Sbjct: 177 VALQLLGLLSKFDSQ-DDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGY 235

Query: 361 GQNEYDEEALMLFIKMEEV------------------------------AGLWPNATTMS 390
            ++   + AL +F  M E                                G+ P++TT +
Sbjct: 236 AKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYT 295

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S + AC R  +    + +H   I+     D YV +A++++Y++ G  + +K +F  +  R
Sbjct: 296 SSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR 355

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           ++VSW  +I G+   G   +++ L  +M        R  +  +D+           L T+
Sbjct: 356 NSVSWTVLIGGFLQYGCFSESVELFNQM--------RAELMAVDQ---------FALATL 398

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL-------NF------ 557
           + GC     +  G ++H+  +++     VVV ++L+ MYAKCG L       NF      
Sbjct: 399 ISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI 458

Query: 558 ------------------ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
                             AR  FD M  RNVITWN ++ AY  HG  ++ L++  +M+ E
Sbjct: 459 VSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTE 518

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
                +V P+ VT++ LF  C+  G    G D         G+         V+ +  + 
Sbjct: 519 ----KDVIPDWVTYVTLFRGCADIGANKLG-DQIIGHTVKVGLILDTSVVNAVITMYSKC 573

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----QNVEI-GEIAAQNLFLLEPDVAS 714
           G++ +A +  + +  +     +W++++     H    Q +EI  +I  +     +PD  S
Sbjct: 574 GRISEARKAFDFLSRK--DLVSWNAMITGYSQHGMGKQAIEIFDDILNKG---AKPDYIS 628

Query: 715 HYVLLS 720
           +  +LS
Sbjct: 629 YVAVLS 634



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 241/538 (44%), Gaps = 87/538 (16%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   ++M    ++PD+  + + L A A +  L  GKQ+H  V
Sbjct: 258 SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQV 317

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ +V +Y KCG    +  +VF  + +++ VSW  +I    ++G +
Sbjct: 318 IR---NLPHIDPYVASAMVELYAKCGC-FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCF 373

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C N      + LG Q+H   L+ G     ++ 
Sbjct: 374 SESVELFNQMRAELMAVDQFALATLISGCCNTM---DICLGSQLHSLCLKSGHTRAVVVS 430

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--- 277
           N+L++MYAK G + +A+ +F    +RD+VSW  ++++ SQ     +A  F   M+ R   
Sbjct: 431 NSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVI 490

Query: 278 -----------------GIK------------PDGVSIASVLPACSHLEMLDTGKEIHAY 308
                            G+K            PD V+  ++   C+ +     G +I  +
Sbjct: 491 TWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGH 550

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  +++D S V +A++ MY  C  +   R+ FDF+S K +  WNAMITGY Q+   ++
Sbjct: 551 TVKVGLILDTSVV-NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQ 609

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI-----HGHAIKLGLGRDRYV 423
           A+ +F  +    G  P+  +  +V+  C  S    + +         H I  GL      
Sbjct: 610 AIEIFDDILN-KGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEH---- 664

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
            + ++D+  R G +  +K + D+M ++ T   W  +++    C  HG+         N  
Sbjct: 665 FSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSA---CKTHGN---------NDL 712

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK-----GKEIHAYAIRNML 535
            E    +++DLD                 PG G    LAK     GK   +  +R ++
Sbjct: 713 AELAAKHLFDLDS----------------PGSGGYMLLAKMYADAGKSDDSAQVRKLM 754



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 144/365 (39%), Gaps = 91/365 (24%)

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL--------------------- 427
           ++  + +C    A      +H   I +GL    ++QN L                     
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 428 -----------MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                      M+ Y+++G +  +  +F  M  RD  SWNT+++GY   GQ  +AL +  
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            M+   +                  PN+ T   V+  CGAL       ++     +    
Sbjct: 148 SMRQTGDS----------------LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQ 191

Query: 537 TDVVVGSALVDMYAKCGCLNFARR-------------------------------VFDLM 565
            D  V +ALVDM  +CG ++FA +                               +F  M
Sbjct: 192 DDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSM 251

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P R+V++WN++I A    G  +E L+++ +M  +G     V+P+  T+ +   AC+    
Sbjct: 252 PERDVVSWNMVISALSKSGRVREALDMVVDMHGKG-----VRPDSTTYTSSLTACARLSS 306

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           +  G  L  ++  +    P  D Y  + +V+L  + G  ++A ++ + +      + +W+
Sbjct: 307 LEWGKQLHVQVIRNL---PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR--NSVSWT 361

Query: 684 SLLGA 688
            L+G 
Sbjct: 362 VLIGG 366


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/700 (34%), Positives = 382/700 (54%), Gaps = 59/700 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  NAL++  A    V D + LF S  +RD VS+N +++  S       +V   R + 
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRAL- 136

Query: 276 LR--GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN-- 331
           LR   ++P  +++++++   S L     G  +H   LR       +FVGS LVDMY    
Sbjct: 137 LREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGA-YAFVGSPLVDMYAKMG 195

Query: 332 -----------------------------CREVECGRRVFDFISDKKIALWNAMITGYGQ 362
                                        C+ +E  + +F  + D+    W  M+TG  Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N    EAL +F +M    G+  +  T  S++ AC    A  + + IH +  +     + +
Sbjct: 256 NGLQLEALDVFRRMR-AEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVF 314

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V +AL+DMYS+   I +++ +F  M  R+ +SW  MI GY   GQ+  +   +R    M+
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGY---GQNACSEEAVRAFSEMQ 371

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            +                KP+  TL +V+  C  L++L +G + H  A+ + L   + V 
Sbjct: 372 MDG--------------IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +ALV +Y KCG +  A R+FD M   + ++W  ++  Y   G+ +E ++L + M+  G  
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNG-- 475

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              +KP+ VTFI + +ACS +G+V +G D F  M+ D+ I P  DHY C++DL  R+G+ 
Sbjct: 476 ---LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRF 532

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A + I  MP   D  G W++LL +CR+  N+EIG+ AA+NL   +P   + YVLL ++
Sbjct: 533 KEAEEFIKQMPHSPDAFG-WATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSM 591

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           +++   W +   +R+ M++  V+KEPGCSWI++ +++H F A D SH  S +++  LE L
Sbjct: 592 HAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWL 651

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
           + +M +EGY PD S VLH+V + +K  ++  HSEKLAIAFG++  P    IR+ KNLRVC
Sbjct: 652 NSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVC 711

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH ATKFISKI  R+I++RD  RFH F +GTCSCGD+W
Sbjct: 712 VDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 226/472 (47%), Gaps = 62/472 (13%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALAC 190
           D+ ++F  + E+D VS+N++I      G    +++ +R +L   +V P+  TL ++ +  
Sbjct: 97  DMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVA 156

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE----- 244
           S LS R    LG  VH   LR+G     F+ + L+ MYAK+G + DA+ +F+  E     
Sbjct: 157 SALSDR---ALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 245 --------------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                                     DRD ++W T+V+ L+QN   LEA+   R+M   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +  D  +  S+L AC  L   + GK+IHAY  R     DN FVGSALVDMY  CR +   
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRT-WYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  ++ + I  W AMI GYGQN   EEA+  F +M ++ G+ P+  T+ SV+ +C  
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTLGSVISSCAN 391

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +  +    H  A+  GL R   V NAL+ +Y + G IE +  +FD+M   D VSW  +
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +TGY   G+  + + L  +M                  V   KP+ +T + VL  C    
Sbjct: 452 VTGYAQFGKAKETIDLFEKM-----------------LVNGLKPDGVTFIGVLSACSRAG 494

Query: 519 ALAKGKEIHAYAIRNMLATDVVV----GSALVDMYAKCGCLNFARRVFDLMP 566
            + KG +      ++    D+V      + ++D+Y++ G    A      MP
Sbjct: 495 LVEKGCDYFDSMQKD---HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 224/460 (48%), Gaps = 31/460 (6%)

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           +G+   A  + +++   N F  +AL+    + R V    R+F  + ++    +NA+ITG+
Sbjct: 61  SGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGF 120

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK---EGIHGHAIKLGL 417
                   ++ L+  +     + P   T+S+++   + + A  D+     +H   ++LG 
Sbjct: 121 SSTGSPARSVQLYRALLREESVRPTRITLSAMI---MVASALSDRALGHSVHCQVLRLGF 177

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
           G   +V + L+DMY++MG I  ++ +F +ME +  V +NT+ITG   C    DA  L + 
Sbjct: 178 GAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQL 237

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKP--------------NSITLMTVLPGCGALSALAKG 523
           M + +       V  L +  L+ +               +  T  ++L  CGAL+A  +G
Sbjct: 238 MVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEG 297

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K+IHAY  R     +V VGSALVDMY+KC  +  A  VF  M  RN+I+W  +I+ YG +
Sbjct: 298 KQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQN 357

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
              +E +     M  +G     +KP++ T  ++ ++C++   + EG   F+ +    G+ 
Sbjct: 358 ACSEEAVRAFSEMQMDG-----IKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLM 411

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAA 702
                   +V L G+ G +EDA++L + M   F    +W++L+ G  +  +  E  ++  
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEM--SFHDQVSWTALVTGYAQFGKAKETIDLFE 469

Query: 703 QNLFL-LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           + L   L+PD  +   +LS   S A L +K  D    M++
Sbjct: 470 KMLVNGLKPDGVTFIGVLSAC-SRAGLVEKGCDYFDSMQK 508



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 210/460 (45%), Gaps = 56/460 (12%)

Query: 46  IESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVK 105
             S  S ARS Q   A+L         ++P      A++   + + D +LG  +H  V++
Sbjct: 120 FSSTGSPARSVQLYRALLR-----EESVRPTRITLSAMIMVASALSDRALGHSVHCQVLR 174

Query: 106 YGYGLSSVTVANTLVNMYGKCG--SDMWDVYK---------------------------- 135
            G+G  +  V + LV+MY K G   D   V++                            
Sbjct: 175 LGFGAYAF-VGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +F  + ++D ++W +M+  L + G    AL+ FR M    V    +T  S+  AC  L+ 
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            +    G+Q+H    R   E N F+ +AL+ MY+K   +  A+ +F+    R+++SW  +
Sbjct: 294 SEE---GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAM 350

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    QN    EAV    +M + GIKPD  ++ SV+ +C++L  L+ G + H  AL +  
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG- 409

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L+    V +ALV +Y  C  +E   R+FD +S      W A++TGY Q    +E + LF 
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFE 469

Query: 375 KMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
           KM  V GL P+  T   V+ AC R+       + F   +  H     +    D Y    +
Sbjct: 470 KM-LVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH----DIVPIDDHY--TCM 522

Query: 428 MDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICG 466
           +D+YSR GR + ++     M    D   W T+++   + G
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 47/265 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    EA+ ++ EM    I+PD+F   +V+ + A +  L  G Q H   
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G  +  +TV+N LV +YGKCGS + D +++FD ++  DQVSW +++    +FGK   
Sbjct: 406 LVSGL-MRYITVSNALVTLYGKCGS-IEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            ++ F  ML + ++P   T + V  ACS                                
Sbjct: 464 TIDLFEKMLVNGLKPDGVTFIGVLSACS-------------------------------- 491

Query: 224 MAMYAKLGRVDDAKTLFKSFE-DRDLVS----WNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                + G V+     F S + D D+V     +  ++   S++ +F EA  F++QM    
Sbjct: 492 -----RAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH-- 544

Query: 279 IKPDGVSIASVLPACSHLEMLDTGK 303
             PD    A++L +C     ++ GK
Sbjct: 545 -SPDAFGWATLLSSCRLRGNMEIGK 568



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 63/281 (22%)

Query: 422 YVQNALMDMYSRMGRIEISKTIFDD-------------------------------MEVR 450
           ++ N L+  Y++ GR+  ++ +FD+                               M  R
Sbjct: 49  FLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPER 108

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VS+N +ITG++  G    ++ L R +  + EE  R              P  ITL  +
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRAL--LREESVR--------------PTRITLSAM 152

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           +    ALS  A G  +H   +R        VGS LVDMYAK G +  ARRVF  M  + V
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG---GEVKPNEVTFIALFAACSHSGMVS 627
           + +N +I              LL+  + E ++G     V  + +T+  +    + +G+  
Sbjct: 213 VMYNTLITG------------LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL 260

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           E +D+F +M+ + G+      +  ++   G     E+  Q+
Sbjct: 261 EALDVFRRMRAE-GVGIDQYTFGSILTACGALAASEEGKQI 300


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/746 (35%), Positives = 421/746 (56%), Gaps = 35/746 (4%)

Query: 60   EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
            EAI  +  M ++ ++       +VL A+A ++ L+ G  +HA  +K G   S+V V ++L
Sbjct: 332  EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN-SNVYVGSSL 390

Query: 120  VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            +NMY KC   M    KVFD + E++ V WN+M+    + G     ++ F  M      P 
Sbjct: 391  INMYAKC-EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPD 449

Query: 180  SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
             FT  S+  AC+ L   + L +GRQ+H   ++   E+N F+ N L+ MYAK G +++A+ 
Sbjct: 450  EFTYTSILSACACL---ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQ 506

Query: 239  LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
             F+   +RD VSWN I+    Q +   EA    R+M L GI PD VS+AS+L  C++L+ 
Sbjct: 507  QFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQA 566

Query: 299  LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
            L+ G+++H + +++  L    + GS+L+DMY  C  +E  R VF  +  + +   NA+I 
Sbjct: 567  LEQGEQVHCFLVKSG-LQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIA 625

Query: 359  GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            GY QN+   EA+ LF +M+   GL P+  T +S++ AC           IH    K GL 
Sbjct: 626  GYAQNDL-VEAIDLFQEMQN-EGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLL 683

Query: 419  RD-RYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLR 476
             D  ++  +L+ MY    R   +  +F + +  + T+ W  +I+G+T  G   +AL L +
Sbjct: 684  YDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQ 743

Query: 477  EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            EM       +RNN           +P+  T  +VL  C  L++L  G+ IH+      L 
Sbjct: 744  EM-------HRNN----------ARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLD 786

Query: 537  TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN-VITWNVIIMAYGMHGEGQEVLELLKN 595
            +D + GSA+VDMYAKCG +  + +VF+ M  +N VI+WN +I+ +  +G  +  L++   
Sbjct: 787  SDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDE 846

Query: 596  MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
            M     +   ++P++VTF+ +  ACSH+G VSEG ++F  M   Y I P  DH AC++DL
Sbjct: 847  M-----KHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDL 901

Query: 656  LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
            LGR G +++A + I+ +  E   A  W++LLGACRIH +   G  AA+ L  LEP+ +S 
Sbjct: 902  LGRWGFLKEAEEFIDKLNFE-PNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSP 960

Query: 716  YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
            YVLLSNIY+++  WD+   VR+ M+E G+RK PGCSWI  G + + F+AGD  H  + ++
Sbjct: 961  YVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEI 1020

Query: 776  HGFLENLSERMRKEGYVPDTSCVLHN 801
            H  L++L   M+++GY+ +T  +L +
Sbjct: 1021 HALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/578 (31%), Positives = 294/578 (50%), Gaps = 64/578 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   +R     + I  +  +    + P+ F +  VL + A + D+ LGKQ+H  V
Sbjct: 149 AWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGV 208

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  +S     +L++MY KCGS + D  K+FD + + D VSW +MIA   + G  + 
Sbjct: 209 IKMGFEFNSFC-EGSLIDMYSKCGS-LVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEE 266

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL+ F  M    + P     V+V  AC                     VG          
Sbjct: 267 ALKVFEDMQKLGLVPDQVAFVTVITAC---------------------VG---------- 295

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                 LGR+DDA  LF    + ++V+WN ++S   +    +EA+ F + M   G+K   
Sbjct: 296 ------LGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTR 349

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ SVL A + LE L+ G  +HA A++   L  N +VGS+L++MY  C ++E  ++VFD
Sbjct: 350 STLGSVLSAIASLEALNYGLLVHAQAIKQG-LNSNVYVGSSLINMYAKCEKMEAAKKVFD 408

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + ++ + LWNAM+ GY QN Y  + + LF +M    G WP+  T +S++ AC   E   
Sbjct: 409 ALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG-CGFWPDEFTYTSILSACACLECLE 467

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               +H   IK     + +V+N L+DMY++ G +E ++  F+ +  RD VSWN +I GY 
Sbjct: 468 MGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYV 527

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
                 +A  + R M              LD       P+ ++L ++L GC  L AL +G
Sbjct: 528 QEEDEDEAFNMFRRMI-------------LDGIA----PDEVSLASILSGCANLQALEQG 570

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           +++H + +++ L T +  GS+L+DMY KCG +  AR VF  MP R+V++ N II  Y   
Sbjct: 571 EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA-Q 629

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            +  E ++L + M  EG     + P+E+TF +L  AC+
Sbjct: 630 NDLVEAIDLFQEMQNEG-----LNPSEITFASLLDACT 662



 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 164/569 (28%), Positives = 284/569 (49%), Gaps = 40/569 (7%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   L   A++    + +  + EM      PD F + ++L A A ++ L +G+Q+H+ ++
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+ +   ++ V NTLV+MY KCG+ + +  + F+ I  +D VSWN++I    +    D A
Sbjct: 478 KHNFEY-NLFVENTLVDMYAKCGA-LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
              FR M+   + P   +L S+   C+NL     L  G QVH   ++ G +   +  ++L
Sbjct: 536 FNMFRRMILDGIAPDEVSLASILSGCANLQ---ALEQGEQVHCFLVKSGLQTCLYAGSSL 592

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G ++ A+ +F     R +VS N I++  +QND  +EA+   ++M   G+ P  
Sbjct: 593 IDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSE 651

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC-REVECGRRVF 342
           ++ AS+L AC+    L+ G++IH    +  +L D  F+G +L+ MY N  R+ +      
Sbjct: 652 ITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFS 711

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +F   K   LW A+I+G+ QN   EEAL L+ +M       P+  T +SV+ AC    + 
Sbjct: 712 EFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHR-NNARPDQATFASVLRACSILASL 770

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            D   IH     +GL  D    +A++DMY++ G ++ S  +F++M  + D +SWN+MI G
Sbjct: 771 GDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVG 830

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G   +AL +  EM++                  R +P+ +T + VL  C     ++
Sbjct: 831 FAKNGYAENALKIFDEMKHT-----------------RIRPDDVTFLGVLTACSHAGRVS 873

Query: 522 KGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
           +G+EI     H+Y I   L       + ++D+  + G L  A    D +    N + W  
Sbjct: 874 EGREIFDIMVHSYKIVPRLDH----CACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWAT 929

Query: 576 IIMAYGMHGE---GQEVLELLKNMVAEGS 601
           ++ A  +HG+   G+   E L  +  E S
Sbjct: 930 LLGACRIHGDDIRGRRAAEKLIELEPENS 958



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 282/578 (48%), Gaps = 66/578 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K IHA  +K+G+G S   + + +V++Y KCG+  +   K F+++ ++D ++WNS+++   
Sbjct: 101 KTIHAQTLKFGFG-SKGRLGSAIVDLYAKCGNVEF-AAKAFNQLEKRDILAWNSVLSMYS 158

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R G  +  +  F  +    V P+ FT   V  +C+ L   D   LG+QVH   +++G E+
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDID---LGKQVHCGVIKMGFEF 215

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N+F   +L+ MY+K G + DA+ +F +  D D VSW  +++   Q     EA+     M 
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+ PD V+  +V+ AC                           VG   +D  C+    
Sbjct: 276 KLGLVPDQVAFVTVITAC---------------------------VGLGRLDDACD---- 304

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
                +F  + +  +  WN MI+G+ +   D EA+  F  M +  G+    +T+ SV+ A
Sbjct: 305 -----LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT-GVKSTRSTLGSVLSA 358

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
               EA      +H  AIK GL  + YV ++L++MY++  ++E +K +FD ++ R+ V W
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLW 418

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N M+ GY   G     + L  EM+                      P+  T  ++L  C 
Sbjct: 419 NAMLGGYAQNGYASKVMKLFSEMRG-----------------CGFWPDEFTYTSILSACA 461

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L  L  G+++H++ I++    ++ V + LVDMYAKCG L  AR+ F+ +  R+ ++WN 
Sbjct: 462 CLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNA 521

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II+ Y    +  E   + + M+ +G     + P+EV+  ++ + C++   + +G  +   
Sbjct: 522 IIVGYVQEEDEDEAFNMFRRMILDG-----IAPDEVSLASILSGCANLQALEQGEQVHCF 576

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +    G++      + ++D+  + G +E A  + + MP
Sbjct: 577 LVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 225/470 (47%), Gaps = 63/470 (13%)

Query: 200 RLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           R  + +H  +L+ G  +   + +A++ +YAK G V+ A   F   E RD+++WN+++S  
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S+     + +     +   G+ P+  + A VL +C+ L  +D GK++H   ++      N
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF-N 216

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           SF   +L+DMY  C  +   R++FD + D     W AMI GY Q    EEAL +F  M++
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           + GL P+     +V+ ACV                                    +GR++
Sbjct: 277 L-GLVPDQVAFVTVITACV-----------------------------------GLGRLD 300

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F  M   + V+WN MI+G+   G   +A+   + M     +  R+          
Sbjct: 301 DACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRS---------- 350

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
                  TL +VL    +L AL  G  +HA AI+  L ++V VGS+L++MYAKC  +  A
Sbjct: 351 -------TLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAA 403

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           ++VFD +  RN++ WN ++  Y  +G   +V++L   M     RG    P+E T+ ++ +
Sbjct: 404 KKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM-----RGCGFWPDEFTYTSILS 458

Query: 619 ACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           AC+    +  G  L  + +K ++      ++   +VD+  + G +E+A Q
Sbjct: 459 ACACLECLEMGRQLHSFIIKHNFEYNLFVEN--TLVDMYAKCGALEEARQ 506



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 22/240 (9%)

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           ++A    + IH   +K G G    + +A++D+Y++ G +E +   F+ +E RD ++WN++
Sbjct: 94  AQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSV 153

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ++ Y+  G     +     +QN                     PN  T   VL  C  L 
Sbjct: 154 LSMYSRQGSLEQVIWCFGSLQN-----------------CGVSPNQFTYAIVLSSCARLV 196

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            +  GK++H   I+     +     +L+DMY+KCG L  AR++FD +   + ++W  +I 
Sbjct: 197 DIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIA 256

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y   G  +E L++ ++M   G     + P++V F+ +  AC   G + +  DLF +M +
Sbjct: 257 GYVQVGLPEEALKVFEDMQKLG-----LVPDQVAFVTVITACVGLGRLDDACDLFVQMPN 311


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/791 (34%), Positives = 426/791 (53%), Gaps = 56/791 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ +  ++I  +++M R+  + D   F  +LK  + ++D SLG QIH  V
Sbjct: 105 SWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVV 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G   + V  A+ L++MY K G    +  +VF  I EK+ VSW+++IA   +     L
Sbjct: 165 VRVGCD-TDVVAASALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F+ M   N   S     SV  +C+ LS    LRLG Q+H ++L+     +  +  A
Sbjct: 223 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSE---LRLGGQLHAHALKSDFAADGIVRTA 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK   + DA+ LF   E+ +  S+N +++  SQ +   +A++   ++   G+  D
Sbjct: 280 TLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 339

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++ V  AC+ ++ L  G +I+  A+++ + +D   V +A +DMY  C+ +    RVF
Sbjct: 340 EISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVC-VANAAIDMYGKCQALAEAFRVF 398

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  +    WNA+I  + QN    E L LF+ M   + + P+  T  SV+ AC      
Sbjct: 399 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSVLKACTGGSLG 457

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI----FDDMEVRDT------ 452
              E IH   +K G+  +  V  +L+DMYS+ G IE ++ I    F    V  T      
Sbjct: 458 YGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEK 516

Query: 453 ----------VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
                     VSWN++I+GY +  Q  DA ML   M  M                    P
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----------------ITP 559

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           +  T  TVL  C  L++   GK+IHA  I+  L +DV + S LVDMY+KCG L+ +R +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMF 619

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           +    R+ +TWN +I  Y  HG+G+E ++L + M+ E      +KPN VTFI++  AC+H
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-----IKPNHVTFISILRACAH 674

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
            G++ +G++ FY MK DYG++P   HY+ +VD+LG++GKV+ A +LI  MP E D    W
Sbjct: 675 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IW 733

Query: 683 SSLLGACRIHQ-NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
            +LLG C IH+ NVE+ E A   L  L+P  +S Y LLSN+Y+ A +W+K  D+R+ M+ 
Sbjct: 734 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 793

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
             ++KEPGCSW+E  DE+H FL GD +H + E+++  L  +   M+      D+S V   
Sbjct: 794 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFVPGV 850

Query: 802 VNEEEKETLLC 812
             EEE +   C
Sbjct: 851 EVEEEDQWCYC 861



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 287/625 (45%), Gaps = 60/625 (9%)

Query: 64  SYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           ++  M  S  +P  F    +L+     +D      + A +V     L  V   N ++N Y
Sbjct: 28  AHAHMILSGFRPTTFVLNCLLQVYTNSRDF-----VSASMVFDRMPLRDVVSWNKMINGY 82

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
            K  ++M      F+ +  +D VSWNSM++   + G+   ++E F  M  +  E    T 
Sbjct: 83  AK-SNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTF 141

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
             +   CS L   +   LG Q+HG  +RVG + +    +AL+ MYAK  R  ++  +F+ 
Sbjct: 142 AIILKVCSCL---EDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 198

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +++ VSW+ I++   QN+    A+ F ++M            ASVL +C+ L  L  G
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
            ++HA+AL++D   D   V +A +DMY  C  ++  + +FD   +     +NAMITGY Q
Sbjct: 259 GQLHAHALKSDFAADG-IVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ 317

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
            E+  +AL+LF ++   +GL  +  ++S V  AC   +   +   I+  AIK  L  D  
Sbjct: 318 EEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVC 376

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V NA +DMY +   +  +  +FD+M  RD VSWN +I  +   G+  + L L   M    
Sbjct: 377 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS- 435

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                           R +P+  T  +VL  C    +L  G EIH+  +++ +A++  VG
Sbjct: 436 ----------------RIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 478

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRN--------------------VITWNVIIMAYGM 582
            +L+DMY+KCG +  A ++      R                      ++WN II  Y M
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
             + ++   L   M+  G     + P++ T+  +   C++      G  +  ++      
Sbjct: 539 KEQSEDAQMLFTRMMEMG-----ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK--- 590

Query: 643 EPSPDHY--ACVVDLLGRAGKVEDA 665
           E   D Y  + +VD+  + G + D+
Sbjct: 591 ELQSDVYISSTLVDMYSKCGDLHDS 615



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 249/514 (48%), Gaps = 40/514 (7%)

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNT 217
           G  +L  +A   M+ S   P++F L  +    +N   RD +          LR V  WN 
Sbjct: 20  GALELGKQAHAHMILSGFRPTTFVLNCLLQVYTN--SRDFVSASMVFDRMPLRDVVSWNK 77

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            I       YAK   +  A   F     RD+VSWN+++S   QN + L+++     M   
Sbjct: 78  MING-----YAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRA 132

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV-GSALVDMYCNCREVE 336
           G + DG + A +L  CS LE    G +IH   +R  +  D   V  SAL+DMY   +   
Sbjct: 133 GTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVR--VGCDTDVVAASALLDMYAKGKRFV 190

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-AGLWPNATTMSSVVPA 395
              RVF  I +K    W+A+I G  QN     AL  F +M++V AG+  + +  +SV+ +
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--SQSIYASVLRS 248

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C           +H HA+K     D  V+ A +DMY++   ++ ++ +FD  E  +  S+
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY 308

Query: 456 NTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           N MITGY+   +HG  AL+L   +         ++    DE         I+L  V   C
Sbjct: 309 NAMITGYSQ-EEHGFKALLLFHRLM--------SSGLGFDE---------ISLSGVFRAC 350

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             +  L++G +I+  AI++ L+ DV V +A +DMY KC  L  A RVFD M  R+ ++WN
Sbjct: 351 ALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 410

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            II A+  +G+G E L L  +M+        ++P+E TF ++  AC+  G +  GM++  
Sbjct: 411 AIIAAHEQNGKGYETLFLFVSMLR-----SRIEPDEFTFGSVLKACT-GGSLGYGMEIHS 464

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
            +    G+  +      ++D+  + G +E+A ++
Sbjct: 465 SIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 497



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 18/198 (9%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C +  A    +  H H I  G     +V N L+ +Y+       +  +FD M +RD VSW
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 456 NTMITGYTICGQHGDA-----LMLLRE-----------MQNMEEEKNRNNVYDLDETVLR 499
           N MI GY        A     +M +R+           +QN E  K+     D+      
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRA--G 133

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            + +  T   +L  C  L   + G +IH   +R    TDVV  SAL+DMYAK      + 
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193

Query: 560 RVFDLMPVRNVITWNVII 577
           RVF  +P +N ++W+ II
Sbjct: 194 RVFQGIPEKNSVSWSAII 211



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C    AL  GK+ HA+ I +       V + L+ +Y        A  VFD MP+R+V++W
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 574 NVIIMAYG 581
           N +I  Y 
Sbjct: 76  NKMINGYA 83


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/683 (38%), Positives = 369/683 (54%), Gaps = 108/683 (15%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           VSWN+IVS  S      +AV   R+M +  GI PD V + ++LP    L           
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGF--------- 74

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
                       FVG+ALVDMY  C ++E   +VF+ +  K +  WNAM+TGY QN   E
Sbjct: 75  ------------FVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFE 122

Query: 368 EALMLFIKMEE-------------VAGLW---------------------PNATTMSSVV 393
           +AL LF KM E             ++G                       PN  T+ S++
Sbjct: 123 DALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLL 182

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLG-------RDRYVQNALMDMYSRMGRIEISKTIFDD 446
            AC    A    +  H +++K  L         D  V NAL+DMY++   +E+++ +FD+
Sbjct: 183 SACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDE 242

Query: 447 M--EVRDTVSWNTMITGYTICGQHGDA---LMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           +  + RD V+W  MI GY    QHGDA   L L  EM            + +D  ++   
Sbjct: 243 ICPKDRDVVTWTVMIGGY---AQHGDANHALQLFSEM------------FKIDNCIV--- 284

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVV-VGSALVDMYAKCGCLNFAR 559
           PN  T+  VL  C  L+AL  GK+IHAY +R + + +DV+ V + L+DMY+K G ++ A+
Sbjct: 285 PNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQ 344

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VFD M  RN ++W  ++  YGMHG           +V +G          +TF+ +  A
Sbjct: 345 VVFDSMSKRNAVSWTSLLTGYGMHGAA---------LVLDG----------ITFLVVLYA 385

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSHSGMV  G+DLFY+M  D+ ++P  +HYAC+ DL GRAG++ +A +LIN M  E    
Sbjct: 386 CSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSME-PTP 444

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL ACR H N E+ E AA+ L  L+ D    Y LLSNIY++A+ W     +R  M
Sbjct: 445 VVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLM 504

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
           K  G++K PG SW++    +  F  GD +H QS++++  L +L +R++  GYVP T+  L
Sbjct: 505 KRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSL 564

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
           H+V++EEK   L  HSEKLA+A+ IL  PPG  IR+ KNLR+C D H A  +IS I   E
Sbjct: 565 HDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHE 624

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           IILRD  RFH FKNG+CSC  YW
Sbjct: 625 IILRDSSRFHQFKNGSCSCKGYW 647



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 191/438 (43%), Gaps = 86/438 (19%)

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI---------------------------- 140
           G     V N LV+MY KCG  M D  KVF+R+                            
Sbjct: 70  GFLGFFVGNALVDMYAKCGK-MEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLF 128

Query: 141 -------TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
                   E D V+W+S+I+   + G    A++ FR M      P+  TL+S+  AC+++
Sbjct: 129 GKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASV 188

Query: 194 SRRDGLRLGRQVHGNSLRV---GEWN-----TFIMNALMAMYAKLGRVDDAKTLFKSF-- 243
                L  G++ H  S++    GE N       ++NAL+ MYAK   ++ A+ +F     
Sbjct: 189 G---ALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICP 245

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL--RGIKPDGVSIASVLPACSHLEMLDT 301
           +DRD+V+W  ++   +Q+     A+    +M      I P+  +I+ VL AC+ L  L  
Sbjct: 246 KDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKF 305

Query: 302 GKEIHAYALRND-ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           GK+IHAY LR   I  D  FV + L+DMY    +V+  + VFD +S +    W +++TGY
Sbjct: 306 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 365

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL--GLG 418
           G +                A L  +  T   V+ AC  S       G+    I L   + 
Sbjct: 366 GMHG---------------AALVLDGITFLVVLYACSHS-------GMVDRGIDLFYRMS 403

Query: 419 RDRYVQNA------LMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDA 471
           +D  V         + D++ R GR+  +  + +DM +  T V W  +++    C  H + 
Sbjct: 404 KDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSA---CRTHSNE 460

Query: 472 LMLLREMQNMEEEKNRNN 489
            +     + + E K  N+
Sbjct: 461 ELAEFAAKKLLELKADND 478



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 169/370 (45%), Gaps = 34/370 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     EA+  + +M     +P+     ++L A A +  L  GK+ H + 
Sbjct: 142 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 201

Query: 104 VKY------GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATL 155
           VK+            + V N L++MY KC S +     +FD I  KD+  V+W  MI   
Sbjct: 202 VKFILKGEHNDDTDDLAVINALIDMYAKCKS-LEVARAMFDEICPKDRDVVTWTVMIGGY 260

Query: 156 CRFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
            + G  + AL+ F  M   +  + P+ FT+  V +AC+ L+    L+ G+Q+H   LR  
Sbjct: 261 AQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA---ALKFGKQIHAYVLRRS 317

Query: 214 EWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
             ++   F+ N L+ MY+K G VD A+ +F S   R+ VSW ++++    +     A + 
Sbjct: 318 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHG----AALV 373

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMY 329
           L          DG++   VL ACSH  M+D G ++  Y +  D ++D      A + D++
Sbjct: 374 L----------DGITFLVVLYACSHSGMVDRGIDLF-YRMSKDFVVDPGVEHYACMADLF 422

Query: 330 CNC-REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
               R  E  R + D   +    +W A+++    +  +E A     K+ E+        T
Sbjct: 423 GRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYT 482

Query: 389 MSSVVPACVR 398
           + S + A  R
Sbjct: 483 LLSNIYANAR 492



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 41/185 (22%)

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
           +VSWN++++ Y+ C    DA+ L REM              +   +L   P+++ ++ +L
Sbjct: 23  SVSWNSIVSVYSHCFVPNDAVFLFREMT-------------VGYGIL---PDTVGVVNIL 66

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
           P  G L                       VG+ALVDMYAKCG +  A +VF+ M  ++V+
Sbjct: 67  PVSGFLGFF--------------------VGNALVDMYAKCGKMEDASKVFERMRFKDVV 106

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN ++  Y  +G  ++ L L   M  E     +++ + VT+ ++ +  +  G   E MD
Sbjct: 107 TWNAMVTGYSQNGRFEDALSLFGKMREE-----KIELDVVTWSSVISGYAQRGFGCEAMD 161

Query: 632 LFYKM 636
           +F +M
Sbjct: 162 VFRQM 166


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 405/717 (56%), Gaps = 37/717 (5%)

Query: 80  FPAVLKAVAGIQDLS---LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           F   L     +Q+LS    G+QIH ++++  +      +   L+ MY  C   M + + +
Sbjct: 142 FEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFE-GDPYLETALIGMYSSCSRPM-EAWSL 199

Query: 137 FDRITEKDQ-VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           F ++  +   V+WN MI      G W+ +LE + +    N +  S +      ACS+   
Sbjct: 200 FGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSH--- 256

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            + L  GRQVH + +++  + + ++  +L+ MYAK G V+DAK +F    D+++   N +
Sbjct: 257 GEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAM 316

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S+   N +  +A+    +M       D  +I+S+L  CS +   D G+ +HA  ++   
Sbjct: 317 ISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS- 375

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           +  N  + SAL+ MY  C   E    VF  + ++ +  W +MI G+ QN   ++AL LF 
Sbjct: 376 MQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFR 435

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            ME+  G+  ++  M+SV+ A +  E       IHG AIK GL  D +V  +L+DMYS+ 
Sbjct: 436 AMEK-EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKF 494

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ-NMEEEKNRNNVYDL 493
           G  E ++ +F  M  ++ V+WN+MI+ Y+  G        L EM  N+  +  ++  Y L
Sbjct: 495 GFAESAEMVFSSMPNKNLVAWNSMISCYSWNG--------LPEMSINLLPQILQHGFY-L 545

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           D         S+++ TVL    +++AL KGK +HAY IR  + +D+ V +AL+DMY KCG
Sbjct: 546 D---------SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 596

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           CL +A+ +F+ MP RN++TWN +I  YG HG  +E + L K M     +  E  P+EVTF
Sbjct: 597 CLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEM-----KRSETAPDEVTF 651

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +AL  +CSHSGMV EG++LF  M+ +YG+EP  +HYA VVDLLGRAG+++DAY  I  MP
Sbjct: 652 LALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMP 711

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            + D++  W  LL ACR H+N+E+GE+ A NL  +EP   S+YV L N+Y   ++WD+A 
Sbjct: 712 IDADRS-VWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAA 770

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           ++R  MK  G++K PGCSWIE  + +  F +GD S  +  +++  L +L   M  +G
Sbjct: 771 NLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 179/667 (26%), Positives = 312/667 (46%), Gaps = 60/667 (8%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           QT    S    +++  +  ++ +A+  + +   S +    F FP++LK  A + +L  G+
Sbjct: 16  QTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGR 75

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK-----DQVSWNSMI 152
            IHA +V  G   S   +A +L+NMY KCG  +    +VFD+++E      D   WN +I
Sbjct: 76  TIHASIVTMGLQ-SDPYIATSLINMYVKCGL-LGSALQVFDKMSESRDSAPDITVWNPVI 133

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR- 211
               ++G ++  L  F  M     +  S+ +                  GRQ+HG  +R 
Sbjct: 134 DGYFKYGHFEEGLAQFCRM-----QELSWYMA-----------------GRQIHGYIIRN 171

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMF 270
           + E + ++  AL+ MY+   R  +A +LF   E+R ++V+WN ++    +N  + +++  
Sbjct: 172 MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLEL 231

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
                    K    S      ACSH E+LD G+++H   ++ +   D+ +V ++L+ MY 
Sbjct: 232 YSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ-DDPYVCTSLLTMYA 290

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP-NATTM 389
               VE  ++VFD + DK++ L NAMI+ +  N    +AL L+ KM+  AG  P ++ T+
Sbjct: 291 KSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK--AGETPVDSFTI 348

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           SS++  C    ++     +H   IK  +  +  +Q+AL+ MY + G  E + ++F  M+ 
Sbjct: 349 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 408

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD V+W +MI G+    +  DAL L R M+               E V   K +S  + +
Sbjct: 409 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEK--------------EGV---KADSDVMTS 451

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           V+     L  +  G  IH +AI+  L +DV V  +LVDMY+K G    A  VF  MP +N
Sbjct: 452 VISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKN 511

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           ++ WN +I  Y  +G  +  + LL  ++  G     V    V       A    G     
Sbjct: 512 LVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHA 571

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             +  ++  D  +E +      ++D+  + G ++ A  +   MP        W+S++   
Sbjct: 572 YQIRLQIPSDLQVENA------LIDMYVKCGCLKYAQLIFENMPRR--NLVTWNSMIAGY 623

Query: 690 RIHQNVE 696
             H N E
Sbjct: 624 GSHGNCE 630



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 264/537 (49%), Gaps = 34/537 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +F     A +  + L  G+Q+H  V+K  +      V  +L+ MY K GS + D  KVFD
Sbjct: 246 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ-DDPYVCTSLLTMYAKSGS-VEDAKKVFD 303

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
           ++ +K+    N+MI+     G+   AL  +  M        SFT+ S+   CS +   D 
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD- 362

Query: 199 LRLGRQVHGNSL-RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
              GR VH   + R  + N  I +AL+ MY K G  +DA ++F + ++RD+V+W ++++ 
Sbjct: 363 --FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAG 420

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             QN +F +A+   R M   G+K D   + SV+ A   LE ++ G  IH +A++  +  D
Sbjct: 421 FCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESD 480

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             FV  +LVDMY      E    VF  + +K +  WN+MI+ Y  N   E ++ L  ++ 
Sbjct: 481 -VFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQIL 539

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           +  G + ++ ++++V+ A     A    + +H + I+L +  D  V+NAL+DMY + G +
Sbjct: 540 Q-HGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCL 598

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + ++ IF++M  R+ V+WN+MI GY   G   +A+ L +EM+  E               
Sbjct: 599 KYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSE--------------- 643

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               P+ +T + ++  C     + +G  +     I   +   +   +++VD+  + G L+
Sbjct: 644 --TAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLD 701

Query: 557 FARRVFDLMPV---RNVITWNVIIMAYGMHGEGQEVLELLKN--MVAEGSRGGEVKP 608
            A      MP+   R+V  W  ++ A   H    E+ EL+ +  +  E +RG    P
Sbjct: 702 DAYSFIRGMPIDADRSV--WLCLLFACRAH-RNMELGELVADNLLKMEPARGSNYVP 755



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 211/394 (53%), Gaps = 13/394 (3%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  Y +M   +   D+F   ++L   + +     G+ +HA V+K     S+V + + L
Sbjct: 328 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQ-SNVAIQSAL 386

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           + MY KCGS   D   VF  + E+D V+W SMIA  C+  ++  AL+ FR M    V+  
Sbjct: 387 LTMYYKCGSTE-DADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKAD 445

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           S  + SV  A   L   + + LG  +HG +++ G E + F+  +L+ MY+K G  + A+ 
Sbjct: 446 SDVMTSVISAGLGL---ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEM 502

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F S  +++LV+WN+++S  S N     ++  L Q+   G   D VSI +VL A S +  
Sbjct: 503 VFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAA 562

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK +HAY +R  I  D   V +AL+DMY  C  ++  + +F+ +  + +  WN+MI 
Sbjct: 563 LLKGKTLHAYQIRLQIPSDLQ-VENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIA 621

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-GHAIKLGL 417
           GYG +   EEA+ LF +M+  +   P+  T  +++ +C  S     +EG++    +++  
Sbjct: 622 GYGSHGNCEEAVRLFKEMKR-SETAPDEVTFLALITSCSHSGMV--EEGLNLFQLMRIEY 678

Query: 418 GRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEV 449
           G +  +++  +++D+  R GR++ + +    M +
Sbjct: 679 GVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPI 712


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/854 (31%), Positives = 434/854 (50%), Gaps = 94/854 (11%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +LK+ + I++ S    IHAH++           +  L  +      D    +++     E
Sbjct: 41  LLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDC--AHQILSYSHE 95

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV--EPSSFTLVSVALACSNLSRRDGLR 200
            + + WN+++    + G     LE +  M+   V  + S+F  + +   C N      ++
Sbjct: 96  PESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFL-IHACCKNFD----VK 150

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           LG +VHG  L+ G   N  + N LM +Y+K G++ +   LF+    RD++SWNT++S   
Sbjct: 151 LGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYV 210

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
               + EA+    +M + G+ PD +++ S++  C+ L+ L+ GK +H Y + N + I  S
Sbjct: 211 LKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGS 270

Query: 320 FVGSALVDMYCNC---------------------------------REVECGRRVFDFIS 346
            + + LVDMY  C                                  +++  R++FD ++
Sbjct: 271 LL-NCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMN 329

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++ +  W  M++GY Q  Y  E+L LF +M     + P+   + +V+ ACV  E F    
Sbjct: 330 ERSLVSWTTMMSGYVQGGYYCESLELFQQM-RFENVIPDEVALVTVLSACVHLEDFDLGR 388

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   +  G+  D ++ NAL+D+Y++ G+++ +   F+ +  +   SWN+M+ G+   G
Sbjct: 389 SVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSG 448

Query: 467 QHGDALMLLREMQNMEEEKN------------RNNVYDLDETVL------RPKPNSITLM 508
               A    R+  N   EK+            ++++++    +         KP+  TL+
Sbjct: 449 GVDKA----RDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLI 504

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  + AL  G  ++ Y  +N +  D ++G+AL+DMY KCGC+  A  +F  +  +
Sbjct: 505 SLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEK 564

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           NV  W  ++ AY M G+  E ++L   M   G     VKP+ VTFIAL AACSH G+V E
Sbjct: 565 NVFVWTAMMAAYAMEGQALEAIDLYLEMEERG-----VKPDHVTFIALLAACSHGGLVDE 619

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   F K++  Y I P+  HY C+VDLLGR G +E+  + I  MP E D    WSSL+ A
Sbjct: 620 GYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPD-VSIWSSLMRA 678

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR H NVE+ E A + L  ++P     +VLLSNIY+ A  WD    VR K+ E GV K+P
Sbjct: 679 CRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQP 738

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G + IE    +H+F+A   S+  S  +   L+++  R+  +  + DT+            
Sbjct: 739 GFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLLVKQELSDTT------------ 783

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
                HSE+LA+AFG++N    + IRV  ++R+C DCH   K IS+   REI++RD  RF
Sbjct: 784 ---SQHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRF 840

Query: 869 HHFKNGTCSCGDYW 882
           H F +G CSC DYW
Sbjct: 841 HRFTDGHCSCKDYW 854



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 284/621 (45%), Gaps = 93/621 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   L ++ +    +E +  Y  M    +  D   F  ++ A     D+ LG ++H  ++
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G +  ++ N L+ +Y KCG  + +V ++F+++T +D +SWN+MI+     G +  A
Sbjct: 161 KCGFGRNK-SLNNNLMGLYSKCGK-LKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNAL 223
           L+ F  ML S V P   T+VS+   C+ L     L +G+++H   +    W    ++N L
Sbjct: 219 LDLFDEMLVSGVLPDEITMVSLVSTCAKLK---DLEMGKRLHLYIVDNKLWIRGSLLNCL 275

Query: 224 MAMYAKLG---------------------------------RVDDAKTLFKSFEDRDLVS 250
           + MY+K G                                 ++D A+ LF    +R LVS
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVS 335

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W T++S   Q   + E++   +QM    + PD V++ +VL AC HLE  D G+ +HA+ +
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV 395

Query: 311 RNDILIDNSFVGSALVDMYCNCRE-------------------------------VECGR 339
              +L+D  F+G+AL+D+Y  C +                               V+  R
Sbjct: 396 TYGMLVD-GFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKAR 454

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             F+ I +K I  WN M+  Y +++   E+  +F KM+  + + P+ TT+ S++ +C + 
Sbjct: 455 DFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS-SNVKPDKTTLISLLSSCAKV 513

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A      ++ +  K  +G D  +  AL+DMY + G +E++  IF  +  ++   W  M+
Sbjct: 514 GALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMM 573

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
             Y + GQ  +A+ L  EM    EE+               KP+ +T + +L  C     
Sbjct: 574 AAYAMEGQALEAIDLYLEM----EERG-------------VKPDHVTFIALLAACSHGGL 616

Query: 520 LAKGKEI--HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           + +G +      +  N++ T    G  +VD+  + G L    +  + MP+  +V  W+ +
Sbjct: 617 VDEGYKYFNKLRSFYNIIPTIHHYG-CMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSL 675

Query: 577 IMAYGMHGEGQEVLELLKNMV 597
           + A   H   +   +  K ++
Sbjct: 676 MRACRSHHNVELAEQAFKQLI 696



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 259/587 (44%), Gaps = 114/587 (19%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +        +REA+  + EM  S + PD     +++   A ++DL +GK++H ++
Sbjct: 201 SWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYI 260

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS------------------DMWDVY----------- 134
           V     +   ++ N LV+MY KCG                    +W              
Sbjct: 261 VDNKLWIRG-SLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKID 319

Query: 135 ---KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
              ++FD++ E+  VSW +M++   + G +  +LE F+ M + NV P    LV+V  AC 
Sbjct: 320 KARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACV 379

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGR------------------ 232
           +L   D   LGR VH   +  G   + F+ NAL+ +YAK G+                  
Sbjct: 380 HLEDFD---LGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAAS 436

Query: 233 -------------VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
                        VD A+  F    ++D+VSWNT+V++  ++D F E+     +M    +
Sbjct: 437 WNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV 496

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KPD  ++ S+L +C+ +  L+ G  ++ Y  +N+I ID + +G+AL+DMY  C  VE   
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGID-AMLGTALIDMYGKCGCVEMAY 555

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F  I +K + +W AM+  Y       EA+ L+++MEE  G+ P+  T  +++ AC   
Sbjct: 556 EIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEE-RGVKPDHVTFIALLAACS-- 612

Query: 400 EAFPDKEGIHGHAIKLG---LGRDRYVQN---------ALMDMYSRMGRIEISKTIFDDM 447
                    HG  +  G     + R   N          ++D+  R+G +E +    + M
Sbjct: 613 ---------HGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERM 663

Query: 448 EVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL------------- 493
            +   VS W++++     C  H +  +  +  + + E    NN   +             
Sbjct: 664 PIEPDVSIWSSLMRA---CRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWD 720

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
           D + +R K +     T +P     + + +   +H +   N+++ D++
Sbjct: 721 DVSKVRTKLHE----TGVPKQPGFTMIEQNGVVHEFVASNLVSADIL 763


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/656 (37%), Positives = 374/656 (57%), Gaps = 30/656 (4%)

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +D A+ +F    +R +V+WN++++ L ++ +  EAV   R M    + PD  +++S
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           V  A S L +    +  H  A+   + + N FVGSALVDMY    +    + V D + +K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            + L  A+I GY Q   D EA+  F  M  V  + PN  T +SV+ +C   +   + + I
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG  +K G       Q +L+ MY R   ++ S  +F  +E  + VSW ++I+G    G+ 
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
             AL+  R+M        R+++          KPNS TL + L GC  L+   +G++IH 
Sbjct: 350 EMALIEFRKMM-------RDSI----------KPNSFTLSSALRGCSNLAMFEEGRQIHG 392

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
              +     D   GS L+D+Y KCGC + AR VFD +   +VI+ N +I +Y  +G G+E
Sbjct: 393 IVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 452

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            L+L + M+  G     ++PN+VT +++  AC++S +V EG +LF   + D  I  + DH
Sbjct: 453 ALDLFERMINLG-----LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDH 506

Query: 649 YACVVDLLGRAGKVEDAYQLIN-MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           YAC+VDLLGRAG++E+A  L   ++ P+      W +LL AC++H+ VE+ E   + +  
Sbjct: 507 YACMVDLLGRAGRLEEAEMLTTEVINPDL---VLWRTLLSACKVHRKVEMAERITRKILE 563

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD- 766
           +EP      +L+SN+Y+S   W++ ++++ KMK+M ++K P  SW+E   E H F+AGD 
Sbjct: 564 IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDL 623

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH  SEQ+   LE L ++ +  GYV D SCV  ++ E  KE  L  HSEKLAIAF +  
Sbjct: 624 FSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR 683

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              G +IR+ KNLRVC DCH   K +S++  REII RD +RFHHF++G+CSCGDYW
Sbjct: 684 NVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 291/590 (49%), Gaps = 47/590 (7%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           +NQFR   ++       D       F  +L+     + +S  K I AH++K G+   +  
Sbjct: 49  NNQFRLLCIT------CDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGF--PAEI 100

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
             + LV+   KCG D+    +VFD ++E+  V+WNS+IA L +  +   A+E +R+M+ +
Sbjct: 101 SGSKLVDASLKCG-DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGR 232
           NV P  +TL SV  A S+LS     +  ++ HG ++ +G    N F+ +AL+ MY K G+
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLE---KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
             +AK +    E++D+V    ++   SQ  +  EAV   + M +  ++P+  + ASVL +
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIA 351
           C +L+ +  GK IH   +++    +++    ++L+ MY  C  V+   RVF  I      
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSG--FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W ++I+G  QN  +E AL+ F KM     + PN+ T+SS +  C     F +   IHG 
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
             K G  RD+Y  + L+D+Y + G  ++++ +FD +   D +S NTMI  Y   G   +A
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L L   M N                 L  +PN +T+++VL  C     + +G E+     
Sbjct: 454 LDLFERMIN-----------------LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496

Query: 532 RN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
           ++  ML  D    + +VD+  + G L  A  +   +   +++ W  ++ A  +H + +  
Sbjct: 497 KDKIMLTNDHY--ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554

Query: 590 LELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
             + + ++       E++P +E T I +    + +G  +  +++  KMKD
Sbjct: 555 ERITRKIL-------EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKD 597



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 11/222 (4%)

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +L  C    +++  K I A+ +++    ++  GS LVD   KCG +++AR+VFD M  R+
Sbjct: 71  LLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERH 129

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           ++TWN +I     H   +E +E+ + M+        V P+E T  ++F A S   +  E 
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMIT-----NNVLPDEYTLSSVFKAFSDLSLEKEA 184

Query: 630 MDLFYKMKDDYGIEPSPDHY-ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
               + +    G+E S     + +VD+  + GK  +A  +++ +  E D     + ++G 
Sbjct: 185 QR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV-EEKDVVLITALIVGY 242

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            +  ++ E   + A    L+E    + Y   S + S   L D
Sbjct: 243 SQKGEDTE--AVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/612 (39%), Positives = 351/612 (57%), Gaps = 32/612 (5%)

Query: 279 IKPDG--VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC--NCRE 334
           IKP      + SV    +H   +   K+ HA  LR  +L  N    S L+      +  +
Sbjct: 2   IKPSSKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLL-HNPLFSSKLISFLALSHSGD 60

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +   R++F  + +    + N MI GY +++   EA+ L+  M E  G+  +  T   V+ 
Sbjct: 61  LNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVE-RGVPVDNYTYPFVLA 119

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC R  A       H   +K G G D +V NAL+  Y   G    +  +FD+  VRD V+
Sbjct: 120 ACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVT 179

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN MI  +   G    A  LL EM  ++                  +P+ +T+++++P C
Sbjct: 180 WNIMINAHLNKGLSEKAFDLLDEMTKLDN----------------LRPDEVTMVSLVPAC 223

Query: 515 GALSALAKGKEIHAYAI---RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             L  L +GK +H+Y+    +  +  D+V+ +ALVDMYAKCG ++ A +VF  M VRNV 
Sbjct: 224 AQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 283

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN +I    MHG G++ + L   M  +     ++ P++VTFIAL  ACSH+G+V EG+ 
Sbjct: 284 TWNALIGGLAMHGHGEDAISLFDQMEHD-----KLMPDDVTFIALLCACSHAGLVDEGLA 338

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
           +F  MK+ + IEP  +HY CVVDLL RA KV+DA   I  MP + +    W++LLGACR 
Sbjct: 339 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV-LWATLLGACRS 397

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
             + ++ E   + +  LEPD    YV+LSN+Y+    WD A+ +RK+MK  G+ K PGCS
Sbjct: 398 GGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCS 457

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPDTSCVLHNVNEEEKETL 810
           WIE    IH+F+AGD SH Q+EQ++  +E ++ R+  +G +VP T+ VL ++ EEEKE  
Sbjct: 458 WIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHS 517

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSEKLAIA G+++TP G+ IR+ KNLRVCNDCH   K  SK+ +REI+ RD  RFHH
Sbjct: 518 LFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHH 577

Query: 871 FKNGTCSCGDYW 882
           FK G+CSC D+W
Sbjct: 578 FKEGSCSCMDFW 589



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 12/294 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  ARS    EA+  Y  M    +  DN+ +P VL A A +  + LG++ H  V+K G+
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           G S + V N L+  Y  CGS       VFD  T +D V+WN MI      G  + A +  
Sbjct: 143 G-SDLFVINALIQFYHNCGS-FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200

Query: 169 -RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW----NTFIMNAL 223
             M    N+ P   T+VS+  AC+ L     L  G+ +H  S  + ++    +  +  AL
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLG---NLERGKFLHSYSKELDKFEINCDLVLETAL 257

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +D A  +F+    R++ +WN ++  L+ +    +A+    QM    + PD 
Sbjct: 258 VDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 317

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVE 336
           V+  ++L ACSH  ++D G  +   A++N   I+        +VD+ C  R+V+
Sbjct: 318 VTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVD 370



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 58/491 (11%)

Query: 176 VEPSS--FTLVSVALA---CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKL 230
           ++PSS    L+SV      C+++S+       +Q H   LR    +  + ++ +  +  L
Sbjct: 2   IKPSSKCTKLISVDFLKTHCTSISKT------KQAHALLLRTHLLHNPLFSSKLISFLAL 55

Query: 231 ---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
              G ++ A+ LF   ++ D    NT++   +++    EAV     M  RG+  D  +  
Sbjct: 56  SHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYP 115

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
            VL AC+ L  +  G+  H   L+N    D  FV +AL+  Y NC    C   VFD  + 
Sbjct: 116 FVLAACARLGAVKLGRRFHCEVLKNGFGSD-LFVINALIQFYHNCGSFGCACDVFDESTV 174

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  WN MI  +      E+A  L  +M ++  L P+  TM S+VPAC +       + 
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF 234

Query: 408 IHGHAIKLG---LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           +H ++ +L    +  D  ++ AL+DMY++ G I+++  +F  M VR+  +WN +I G  +
Sbjct: 235 LHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAM 294

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G   DA+ L  +M++             D+ +    P+ +T + +L  C     + +G 
Sbjct: 295 HGHGEDAISLFDQMEH-------------DKLM----PDDVTFIALLCACSHAGLVDEGL 337

Query: 525 EIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA-- 579
            +   A++N    +  +     +VD+  +   ++ A    + MP++ N + W  ++ A  
Sbjct: 338 AMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR 396

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNE----VTFIALFAACSHSGMVSEGMDLFYK 635
            G H +  E +         G R  E++P+     V    L+A  S        + L  +
Sbjct: 397 SGGHFDLAEKI---------GRRVIELEPDSCGRYVMLSNLYAGVSQW---DHALKLRKQ 444

Query: 636 MKDDYGIEPSP 646
           MK+  GIE +P
Sbjct: 445 MKNK-GIEKTP 454



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 191/387 (49%), Gaps = 17/387 (4%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSM 151
           +S  KQ HA +++  + L +   ++ L++      S D+    K+F ++   D    N+M
Sbjct: 24  ISKTKQAHALLLR-THLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I    R      A+  +  M+   V   ++T   V  AC+ L     ++LGR+ H   L+
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG---AVKLGRRFHCEVLK 139

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   + F++NAL+  Y   G    A  +F     RD+V+WN ++++        +A   
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199

Query: 271 LRQMA-LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVD 327
           L +M  L  ++PD V++ S++PAC+ L  L+ GK +H+Y+   D    N    + +ALVD
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVD 259

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++   +VF  +  + +  WNA+I G   + + E+A+ LF +ME    L P+  
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEH-DKLMPDDV 318

Query: 388 TMSSVVPACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIF 444
           T  +++ AC  S A    EG+    A+K     +  +++   ++D+  R  +++ +    
Sbjct: 319 TFIALLCAC--SHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFI 376

Query: 445 DDMEVR-DTVSWNTMITGYTICGQHGD 470
           ++M ++ ++V W T++ G    G H D
Sbjct: 377 ENMPIKANSVLWATLL-GACRSGGHFD 402


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/813 (32%), Positives = 428/813 (52%), Gaps = 113/813 (13%)

Query: 172 LYSNVEP-SSFTLVSVALACSNL-----SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALM 224
           L + V P S+  LVS+   C++L       R   RL  Q+H  ++R G   +  +  AL+
Sbjct: 35  LRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALV 94

Query: 225 AMYAKLGRVDD-AKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            + A+LGR    A+ L ++ ED  +D V WN  V+ L++ +++ EA+   R+M  RG+  
Sbjct: 95  DLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPA 154

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRR 340
           DG + A VL AC     L  G+ +HAYAL+  + +D +  V   L  MY    +V    R
Sbjct: 155 DGYTCARVLHACGRAGALREGRAVHAYALK--LALDAHPLVPGFLAGMYAENADVAAATR 212

Query: 341 VFDFIS-----------------------------------DKKIALWNAMITGYGQNEY 365
           V D +                                    +  +A WN +++G  ++  
Sbjct: 213 VLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGR 272

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           D EAL +   M +  GL P+ATT+SS++ +   +        IH   ++  L  D Y   
Sbjct: 273 DREALGVVASMLK-QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGT 331

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVR----------------------------------- 450
           AL+DMY++ GR++ ++ + D +E R                                   
Sbjct: 332 ALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP 391

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQ--------------------NMEEEKNRNNV 490
           D  +WN +ITGY++ GQ   A++LLR+++                    N E E +    
Sbjct: 392 DITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFC 451

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           +++ +  +  +P+ +T+  +L  C  L+   KGKE+H +A+R     D+VV +AL+DMY+
Sbjct: 452 HEMQKDGV--QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYS 509

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           K G L  A+ +F+ +  +N++  N ++    +HG+G+E +EL  +M   G     +KP+ 
Sbjct: 510 KGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSG-----LKPDS 564

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           +TF AL  AC   G+V+EG + F  M+  YG++P+ ++YAC+VDLL R G +++A   I 
Sbjct: 565 ITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIE 624

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
             P +   A  W +LL  C IH N+ + E+AA+NLF+LEP  +++Y+L+ N+Y   +++D
Sbjct: 625 RSPID-PGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYD 683

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           +A  ++  MK  GV   PG SWI+    IH F      H ++ +++  L  L  +++K G
Sbjct: 684 EAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAG 743

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG-TTIRVAKNLRVCNDCHQAT 849
           YVPDTSC+ +NV EEEKE LL GH+EKLAI +G++ +      +RV KN R+CNDCH+  
Sbjct: 744 YVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVA 803

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K IS +  R+IILRD  RFHHF +G CSC DYW
Sbjct: 804 KHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 157/664 (23%), Positives = 269/664 (40%), Gaps = 144/664 (21%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE---KDQVSWNSM 151
           L  Q+H+  V+ G       V   LV++  + G       ++     E   KD V WN  
Sbjct: 70  LAPQLHSLAVRTGLSRDP-RVTCALVDLLARLGRGP-SCARLLHEAAEDGAKDAVLWNKH 127

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +A L    +WD A+  FR M    V    +T   V  AC    R   LR GR VH  +L+
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHAC---GRAGALREGRAVHAYALK 184

Query: 212 V--------------------------------GEWNTFIMNALMAMYAKLGRVDDAKTL 239
           +                                G  +    NA++A  A+LG VDDA  L
Sbjct: 185 LALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALEL 244

Query: 240 F----KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
                +S  + ++ +WNT++S  S++ +  EA+  +  M  +G++PD  +++S+L + ++
Sbjct: 245 AARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS--------- 346
             +L  G EIH + LRN +  D  + G+ALVDMY  C  ++C ++V D +          
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPD-VYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNS 363

Query: 347 --------------------------DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
                                     D  I  WN +ITGY  N    +A++L  ++ + A
Sbjct: 364 LVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAA 422

Query: 381 GLWPNATTMSSVVPACVRSEAFPD---------KEGI----------------------- 408
           G+ PN  + +S++     +  + D         K+G+                       
Sbjct: 423 GVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKG 482

Query: 409 ---HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
              H  A++     D  V  AL+DMYS+ G +  +K IF+ ++ ++ V  N M+TG  + 
Sbjct: 483 KELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVH 542

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ  +A+ L  +M N                    KP+SIT   +L  C ++  + +G E
Sbjct: 543 GQGREAIELFHDMWNSG-----------------LKPDSITFTALLTACRSMGLVTEGWE 585

Query: 526 -IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
              +   +  +       + +VD+ A+CG L+ A    +  P+      W  ++    +H
Sbjct: 586 YFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIH 645

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           G         +N+         ++P N   ++ +     +  M  E   L Y MK   G+
Sbjct: 646 GNLALAEVAARNLFI-------LEPYNSANYLLMMNLYEYERMYDEAESLKYAMKAR-GV 697

Query: 643 EPSP 646
           +  P
Sbjct: 698 DSRP 701



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 196/448 (43%), Gaps = 43/448 (9%)

Query: 270 FLRQMALR-GIKPDGVSI-ASVLPACSHLEMLDT--------GKEIHAYALRNDILIDNS 319
            L   ALR G+ P    +  S+L  C+ L   DT          ++H+ A+R  +  D  
Sbjct: 29  LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88

Query: 320 FVGSALVDMYCNC-REVECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKM 376
            V  ALVD+     R   C R + +   D  K   LWN  +    + E  +EA+ +F +M
Sbjct: 89  -VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREM 147

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           +   G+  +  T + V+ AC R+ A  +   +H +A+KL L     V   L  MY+    
Sbjct: 148 Q-ARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENAD 206

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR---NNV--- 490
           +  +  + D M     V WN ++      G   DAL L   M     E N    N V   
Sbjct: 207 VAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSG 266

Query: 491 ---YDLDETVLRP---------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
              +  D   L           +P++ T+ ++L        L  G EIH + +RN L  D
Sbjct: 267 CSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPD 326

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V  G+ALVDMYAKCG L+ A++V D +  RN+ TWN ++  Y   G     LEL++ M  
Sbjct: 327 VYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM-- 384

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
              +   + P+  T+  L    S +G  S+ + L  ++K   G+ P+   +  ++     
Sbjct: 385 ---KKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIK-AAGVTPNVVSWTSLISGSCH 440

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            G+ ED++   +    E  K G   SL+
Sbjct: 441 NGEYEDSFYFCH----EMQKDGVQPSLV 464



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 208/463 (44%), Gaps = 54/463 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   +R  + REA+     M +  ++PD     ++LK+VA    L  G +IH   
Sbjct: 259 TWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFF 318

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       V     LV+MY KCG  +    KV D +  ++  +WNS++A     G++D+
Sbjct: 319 LRNQLE-PDVYTGTALVDMYAKCGR-LDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDI 376

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE   +M  + ++P   T                                WN  I    
Sbjct: 377 ALELVELMKKNRLDPDITT--------------------------------WNGLITG-- 402

Query: 224 MAMYAKLGRVDDAKTLFKSFE----DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
              Y+  G+   A  L +  +      ++VSW +++S    N ++ ++  F  +M   G+
Sbjct: 403 ---YSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGV 459

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +P  V+++ +L AC+ L +   GKE+H +ALR     D   V +AL+DMY     +   +
Sbjct: 460 QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCD-MVVSTALIDMYSKGGSLVSAK 518

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F+ I  K + L NAM+TG   +    EA+ LF  M   +GL P++ T ++++ AC RS
Sbjct: 519 VIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWN-SGLKPDSITFTALLTAC-RS 576

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
                +   +  +++   G     +N   ++D+ +R G ++ +    +   +    S W 
Sbjct: 577 MGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWG 636

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRN-----NVYDLD 494
            ++TG +I G    A +  R +  +E   + N     N+Y+ +
Sbjct: 637 ALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYE 679


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/576 (40%), Positives = 344/576 (59%), Gaps = 24/576 (4%)

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A A  N + + N    + L++ +    +++   +VFD + ++ +A WNAM++G  Q E++
Sbjct: 11  AIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFN 70

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           E  L LF +M E+ G  P+  T+ SV+  C    A    + +H + +K G   +  V ++
Sbjct: 71  ENGLFLFREMHEL-GFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSS 129

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L  MY + G +   + +   M +R+ V+WNT+I G    G H + ++ L  M  M     
Sbjct: 130 LAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNG-HFEGVLDLYNMMKM----- 183

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                    + LRP  + ITL++V+     L+ L +G++IHA AI+    + V V S+L+
Sbjct: 184 ---------SGLRP--DKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLI 232

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
            MY+KCGCL  + +        + + W+ +I AYG HG G+E + L + M  EG  G   
Sbjct: 233 SMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGG--- 289

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
             N+VTF++L  ACSH+G+  +GM  F  M + YG++P  +HY CVVDLLGR+G +++A 
Sbjct: 290 --NDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAE 347

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
            +I  MP E D    W +LL ACRIH+N ++    A+ +  L P  ++ YVLLSNI++SA
Sbjct: 348 AMIRSMPLEADVV-IWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASA 406

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           + W     VR  M++  V+KEPG SW+E  + + +F  GD SH  SE++  +L+ L E M
Sbjct: 407 KRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEM 466

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           +  GYVPDT+ V H+ + EEKE  L  HSEKLAIAFG++N PPG+ IRV KNLR+C+DCH
Sbjct: 467 KLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCH 526

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            A K IS I +REII+RD  RFHHFK+G CSCGDYW
Sbjct: 527 VAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 16/372 (4%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           + ++   N L+N + + G D+    KVFD + E++  +WN+M++ L +F   +  L  FR
Sbjct: 20  MRNIMSHNILINGHVQHG-DLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFR 78

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M      P  FTL SV   C+ L        G+QVH   L+ G E+N  + ++L  MY 
Sbjct: 79  EMHELGFLPDEFTLGSVLRGCAGLRASYA---GKQVHAYVLKYGYEFNLVVGSSLAHMYM 135

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G + + + + K+   R++V+WNT+++  +QN  F   +     M + G++PD +++ S
Sbjct: 136 KSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVS 195

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALVDMYCNCREVECGRRVFDFIS 346
           V+ + + L  L  G++IHA A++      NS V   S+L+ MY  C  +E   +      
Sbjct: 196 VISSSAELATLFQGQQIHAEAIKAGA---NSAVAVLSSLISMYSKCGCLEDSMKALLDCE 252

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
                LW++MI  YG +   EEA+ LF +ME+  GL  N  T  S++ AC  +       
Sbjct: 253 HPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQ-EGLGGNDVTFLSLLYACSHNGLKEKGM 311

Query: 407 GIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
           G     + K GL         ++D+  R G ++ ++ +   M +  D V W T+++    
Sbjct: 312 GFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA--- 368

Query: 465 CGQHGDALMLLR 476
           C  H +A M  R
Sbjct: 369 CRIHRNADMATR 380



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 170/374 (45%), Gaps = 29/374 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N    N L+  + + G +D A  +F    +R++ +WN +VS L Q +     +   R+M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  PD  ++ SVL  C+ L     GK++HAY L+      N  VGS+L  MY     +
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEF-NLVVGSSLAHMYMKSGSL 140

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
             G +V   +  + +  WN +I G  QN + E  L L+  M +++GL P+  T+ SV+ +
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLY-NMMKMSGLRPDKITLVSVISS 199

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                     + IH  AIK G      V ++L+ MYS+ G +E S     D E  D+V W
Sbjct: 200 SAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           ++MI  Y   G+  +A+ L    + ME+E                  N +T +++L  C 
Sbjct: 260 SSMIAAYGFHGRGEEAVHLF---EQMEQEG--------------LGGNDVTFLSLLYACS 302

Query: 516 ALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-N 569
                 KG       +  Y ++  L     V    VD+  + GCL+ A  +   MP+  +
Sbjct: 303 HNGLKEKGMGFFKLMVEKYGLKPRLEHYTCV----VDLLGRSGCLDEAEAMIRSMPLEAD 358

Query: 570 VITWNVIIMAYGMH 583
           V+ W  ++ A  +H
Sbjct: 359 VVIWKTLLSACRIH 372



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 138/248 (55%), Gaps = 7/248 (2%)

Query: 57  QFRE-AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           +F E  +  + EM      PD F   +VL+  AG++    GKQ+HA+V+KYGY  + V V
Sbjct: 68  EFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLV-V 126

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            ++L +MY K GS + +  KV   +  ++ V+WN++IA   + G ++  L+ + MM  S 
Sbjct: 127 GSSLAHMYMKSGS-LGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSG 185

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVD 234
           + P   TLVSV  + + L+    L  G+Q+H  +++ G  +   ++++L++MY+K G ++
Sbjct: 186 LRPDKITLVSVISSSAELAT---LFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLE 242

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           D+       E  D V W++++++   + +  EAV    QM   G+  + V+  S+L ACS
Sbjct: 243 DSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACS 302

Query: 295 HLEMLDTG 302
           H  + + G
Sbjct: 303 HNGLKEKG 310



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++  F   +  Y  M  S ++PD     +V+ + A +  L  G+QIHA  
Sbjct: 157 AWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEA 216

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S+V V ++L++MY KCG  + D  K        D V W+SMIA     G+ + 
Sbjct: 217 IKAGAN-SAVAVLSSLISMYSKCGC-LEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEE 274

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS-NLSRRDGL---RLGRQVHGNSLRVGEWNTFI 219
           A+  F  M    +  +  T +S+  ACS N  +  G+   +L  + +G   R+  +   +
Sbjct: 275 AVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVV 334

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
                 +  + G +D+A+ + +S   + D+V W T++S+
Sbjct: 335 -----DLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 261/817 (31%), Positives = 427/817 (52%), Gaps = 121/817 (14%)

Query: 178 PSSFT----LVSVALACSNL----------SRRDGLRLGRQVHGNSLRVGEWN--TFIMN 221
           PSSF     L+S+   C ++          S R   RL  Q+H  ++R G       +  
Sbjct: 44  PSSFRDARLLLSLLRQCGDMICLDEEDTGSSLRAARRLAPQLHSLAVRAGHATREPRVAC 103

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED----RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           AL  + A+LGR   ++ L +  ++    +D V WN  V+ L++  ++ EA+   R+M  R
Sbjct: 104 ALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFREMQAR 163

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+  DG ++A VL AC        GK +HA+AL+  ++  +  V   L  MY    +V  
Sbjct: 164 GVAADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAA 223

Query: 338 GRRV------------FDFI------------------------SDKKIALWNAMITGYG 361
              V            +D +                         +  +A WNA+++G  
Sbjct: 224 ATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCA 283

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++  D EAL +  +M E  GLWP+ATT+SS++ +   +        +H   ++ GL  D 
Sbjct: 284 RHGRDREALAVLRRMLE-QGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDA 342

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM----------------------- 458
           Y   AL+DMY++ GR++ ++ +FD +E R+  +WN++                       
Sbjct: 343 YTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRN 402

Query: 459 ------------ITGYTICGQHGDALMLLREMQ--------------------NMEEEKN 486
                       ITGY++ G    A++LLR+++                    N E E +
Sbjct: 403 RLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDS 462

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
            N   ++ +  +  +P+ +T++ +L  C  L+ L KGKE+H +A+R     D+VVG+AL+
Sbjct: 463 FNFFKEMQKDGV--QPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALI 520

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           DMY+K G L  A+R+F  +  +N++  N ++    +HG+  E + L  ++   G     +
Sbjct: 521 DMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSG-----L 575

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           KP+ +TF AL  AC   G+++EG + F  M+  YG+ P+ ++YAC+VDLL R+G +++A 
Sbjct: 576 KPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAM 635

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
            LI   P +   A  W +LL  C IH N+++ E+AA+NLF LEP  +++Y+++ ++Y   
Sbjct: 636 ALIERSPVD-PGASLWGALLTGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHE 694

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           Q++D+A  ++  MK  GV   PG SWI+    IH F      H ++ ++   L +L  ++
Sbjct: 695 QMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVFEVDGSPHPETAEICEELMSLVRQI 754

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG-TTIRVAKNLRVCNDC 845
           +  GYVPDTSCV++NV EEEKE LL  H+EKLAI +G++++      +RV KN R+C+DC
Sbjct: 755 KMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRMCSDC 814

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H+  K IS +  R+IILRD  RFHHF +G CSC DYW
Sbjct: 815 HEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDYW 851



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 132/274 (48%), Gaps = 11/274 (4%)

Query: 112 SVTVANTLVNMY---GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           +VT  N L+  Y   G     M  + ++       + VSW S+I+  C  G+++ +   F
Sbjct: 407 NVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFF 466

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
           + M    V+PS  T++ +  AC+ L+    L+ G+++H  +LR   + +  +  AL+ MY
Sbjct: 467 KEMQKDGVQPSLVTMLVLLRACAGLAL---LKKGKELHCFALRRAYDCDMVVGTALIDMY 523

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           +K G +  AK +F   ++++LV  N +++ L+ + +  EA+     +   G+KPD ++  
Sbjct: 524 SKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFT 583

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS- 346
           ++L AC  + ++  G E          ++  +   + +VD+      ++    + +    
Sbjct: 584 ALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPV 643

Query: 347 DKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
           D   +LW A++TG   +G  +  E A     ++E
Sbjct: 644 DPGASLWGALLTGCSIHGNLDLAEVAARNLFRLE 677



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + ++ ++   + EM +  +QP       +L+A AG+  L  GK++H   
Sbjct: 445 SWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFA 504

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y    V V   L++MY K GS +    ++F RI  K+ V  N+M+  L   G+   
Sbjct: 505 LRRAYDCDMV-VGTALIDMYSKAGS-LTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHE 562

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           A+  F  +  S ++P S T  ++  AC ++
Sbjct: 563 AITLFHDLWRSGLKPDSITFTALLTACRSM 592


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/708 (36%), Positives = 384/708 (54%), Gaps = 35/708 (4%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTL 239
           T + +A    +  R   LRLGR +H   +  G    +TF+ N L+ MY+    V  A  L
Sbjct: 16  TSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRL 75

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F +    +LVSW T+VS L+QN    +A+     M   G+ P   +++S   A + L   
Sbjct: 76  FDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAAR 135

Query: 300 DTGKEIHAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
             G ++H   +R  +  D   FV S L DMY     +    RVFD +  K    W AMI 
Sbjct: 136 HAGAQLHCVGVR--LGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMID 193

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD---KEGIHGHAIKL 415
           GY +N   E A++ F  M     +  +   + SV+ A   S    D      IH   +K 
Sbjct: 194 GYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGWLARAIHSCVMKS 250

Query: 416 GLGRDRYVQNALMDMYSRMGRIE-ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           G  ++  V+NAL DMY++   ++  ++ +  D    + VS  ++I GY        AL++
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             E++    E                 PN  T  +++ GC   + L +G ++HA  I+  
Sbjct: 311 FIELRRQGVE-----------------PNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTS 353

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           L +D  V S L+DMY KCG ++ + ++F  +     I WN  I     HG G+E +    
Sbjct: 354 LISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFD 413

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M + G     ++PN +TF++L  ACSH+G+V EG+  FY MKD +GIEP  +HY+C++D
Sbjct: 414 RMTSSG-----IRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIID 468

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           + GRAG++++A + I  MP + +  G W SLLGACR+  N E+GEIAA N+  LEPD   
Sbjct: 469 MYGRAGRLDEAEKFIGEMPVKPNAYG-WCSLLGACRMRGNKELGEIAADNMMKLEPDNTG 527

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            +V LS IY+S   W+    VRK M++  ++K PG SW++   + H F + D SH Q E+
Sbjct: 528 VHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEK 587

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  LE L ER+++EGYVPDT  +  N+ +  K+ +L  HSE++A+AF +++ P    I 
Sbjct: 588 IYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPII 647

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           V KNLR+C DCH A KFISK+E+R+II+RD  RFHHF  G CSCGDYW
Sbjct: 648 VKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 239/523 (45%), Gaps = 28/523 (5%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           + +RS     +    A L++     DL LG+ +HA +V  G   +S  +AN L+ MY  C
Sbjct: 7   QHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHC 66

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
            +D+    ++FD +   + VSW ++++ L +      AL AF  M  + + P+ F L S 
Sbjct: 67  -ADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSA 125

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           A A + L+       G Q+H   +R+G +   F+ + L  MY+K G + +A  +F     
Sbjct: 126 ARAAAALAA---RHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQ 182

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKE 304
           +D V+W  ++   ++N     AV+  R M   G +  D   + SVL A   L+     + 
Sbjct: 183 KDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARA 242

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK-KIALWNAMITGYGQN 363
           IH+  +++    + + V +AL DMY    +++   RV         +    ++I GY + 
Sbjct: 243 IHSCVMKSGFEQEVA-VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIET 301

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           +  E+AL++FI++    G+ PN  T SS++  C           +H   IK  L  D +V
Sbjct: 302 DCIEKALLMFIELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFV 360

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            + L+DMY + G I +S  +F ++E    ++WN  I    +  QHG     +R    M  
Sbjct: 361 SSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAI---NVLAQHGHGREAIRAFDRMTS 417

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVG 542
              R              PN IT +++L  C     + +G K  ++    + +       
Sbjct: 418 SGIR--------------PNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHY 463

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
           S ++DMY + G L+ A +    MPV+ N   W  ++ A  M G
Sbjct: 464 SCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRG 506



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 217/425 (51%), Gaps = 20/425 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +++  R+A+ ++  M R+ + P  FA  +  +A A +     G Q+H   
Sbjct: 86  SWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVG 145

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+  + + VA+ L +MY K G  + +  +VFD++ +KD V+W +MI    + G  + 
Sbjct: 146 VRLGFD-AELFVASNLADMYSKSGL-LVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR---LGRQVHGNSLRVG-EWNTFI 219
           A+ AFR M    +  +   ++     CS LS   GL+   L R +H   ++ G E    +
Sbjct: 204 AVIAFRDMRREGLVGADQHVL-----CSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAV 258

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
            NAL  MYAK   +D+A  + K  +   ++VS  +++    + D   +A++   ++  +G
Sbjct: 259 RNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQG 318

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+  + +S++  C+   +L+ G ++HA  ++   LI +SFV S L+DMY  C  +   
Sbjct: 319 VEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTS-LISDSFVSSTLLDMYGKCGLISLS 377

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            ++F  I       WNA I    Q+ +  EA+  F +M   +G+ PN  T  S++ AC  
Sbjct: 378 IQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTS-SGIRPNHITFVSLLTAC-- 434

Query: 399 SEAFPDKEGI-HGHAIK--LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
           S A    EG+ + +++K   G+       + ++DMY R GR++ ++    +M V+ +   
Sbjct: 435 SHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYG 494

Query: 455 WNTMI 459
           W +++
Sbjct: 495 WCSLL 499


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/637 (37%), Positives = 359/637 (56%), Gaps = 28/637 (4%)

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R +  W + V      D   EAV  L Q    G   D   +  ++  C+  + L+ G+ I
Sbjct: 7   RAITKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRI 63

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H + + +  L    F+ + LVDMY  C  +   +RVFD +  K +  W  ++ G+ Q+  
Sbjct: 64  HRW-MDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGR 122

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA+ LF +M +  G  P+   +   + +C  ++A      IH  A   G+  D    N
Sbjct: 123 GVEAIQLFHRMCQ-EGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTAN 181

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           A+++MY + G I  +  +F  M  ++ +SW+TMI  +       +AL+  + MQ    E 
Sbjct: 182 AIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMEL 241

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           +R                 IT ++VL    ++ AL  GK +H   +   L T +VVG+ L
Sbjct: 242 DR-----------------ITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTL 284

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           V+MY KCG  + AR VFD M  +NV++WN ++ AYG +G  +E L L  +M  EG     
Sbjct: 285 VNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEG----- 339

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           V+PN++TF+ +   CSHSG   + +  F +M+ D+GI P   H+ C++D+LGR+GK+E+A
Sbjct: 340 VRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEA 399

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
            +LI  MP   D A  W+SLL AC  H++ +    AA+  F  EP  A+ Y++LSN+Y++
Sbjct: 400 EELIQAMPVPAD-AVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAA 458

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
            + WD+A  VRK+M++ GVRK+ G SWIE   ++H+F+AGD  H    ++   L+ L   
Sbjct: 459 LKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSE 518

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           MR +GY PD   V+H++ EEEK+ +L  HSEKLA+AFGI +TPP T + + KNLRVC+DC
Sbjct: 519 MRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDC 578

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H A KFIS +E R I +RD  RFHHF  G CSCGDYW
Sbjct: 579 HSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 195/384 (50%), Gaps = 18/384 (4%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +++  AG + L  G++IH   +  G       ++N LV+MYGKCGS + +  +VFD +  
Sbjct: 47  LIRRCAGAKALEEGRRIH-RWMDSGTLDRPRFLSNLLVDMYGKCGS-LVEAKRVFDAMQH 104

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           K+  SW  ++A   + G+   A++ F  M      P    L+    +C        L  G
Sbjct: 105 KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAK---ALSQG 161

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R++H  +   G + +    NA++ MY K G + +A  +F    +++++SW+T++++  QN
Sbjct: 162 REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQN 221

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF- 320
           +   EA++F + M   G++ D ++  SVL A + +  L+ GK +H   +     +D S  
Sbjct: 222 ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAG--LDTSIV 279

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VG+ LV+MY  C   +  R VFD + +K +  WNAM+  YGQN    EAL LF  M ++ 
Sbjct: 280 VGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSM-DLE 338

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL----GLGRDRYVQNALMDMYSRMGR 436
           G+ PN  T  +++  C  S  F D      H +++    G+         L+DM  R G+
Sbjct: 339 GVRPNDITFVTILYCCSHSGKFKDAV---SHFVEMRQDFGITPREVHFGCLIDMLGRSGK 395

Query: 437 IEISKTIFDDMEV-RDTVSWNTMI 459
           +E ++ +   M V  D V W +++
Sbjct: 396 LEEAEELIQAMPVPADAVLWTSLL 419



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 136/253 (53%), Gaps = 6/253 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +S +  EAI  +  M +    PD  A    + +    + LS G++IH+  
Sbjct: 109 SWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAA 168

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G   S +  AN ++NMYGKCGS + + + VF R+ EK+ +SW++MIA  C+    D 
Sbjct: 169 ASCGMD-SDLVTANAIINMYGKCGS-IGEAFAVFTRMPEKNVISWSTMIAAFCQNELADE 226

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F++M    +E    T VSV  A +++     L LG+ +H   +  G + +  + N 
Sbjct: 227 ALLFFKLMQQEGMELDRITYVSVLDAYTSVG---ALELGKALHVRIVYAGLDTSIVVGNT 283

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY K G  DDA+ +F S  ++++VSWN ++++  QN +  EA+     M L G++P+
Sbjct: 284 LVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPN 343

Query: 283 GVSIASVLPACSH 295
            ++  ++L  CSH
Sbjct: 344 DITFVTILYCCSH 356


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/667 (37%), Positives = 385/667 (57%), Gaps = 26/667 (3%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFK--SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           F+ N L+ +YAK G ++ A  LF       + +V+W ++++ LS  +  L+A+    QM 
Sbjct: 178 FLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMR 237

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  P+  + +S+L A +   M+  G+++H+   ++     N FVG+ALVDMY  C ++
Sbjct: 238 CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG-FDANIFVGTALVDMYAKCADM 296

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
               RVFD + ++ +  WN+MI G+  N   + A+ +F  +     + PN  ++SSV+ A
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C           +HG  +K GL    YV N+LMDMY +    +    +F  +  RD V+W
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N ++ G+               +QN + E+  N  + +    + P   S +  TVL    
Sbjct: 417 NVLVMGF---------------VQNDKFEEACNYFWVMRREGILPDEASFS--TVLHSSA 459

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           +L+AL +G  IH   I+     ++ +  +L+ MYAKCG L  A +VF+ +   NVI+W  
Sbjct: 460 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 519

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I AY +HG   +V+EL ++M++EG     ++P+ VTF+ + +ACSH+G V EG+  F  
Sbjct: 520 MISAYQLHGCANQVIELFEHMLSEG-----IEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           MK  + + P P+HYAC+VDLLGRAG +++A + I  MP +      W +LLGACR + N+
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMK-PTPSVWGALLGACRKYGNL 633

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           ++G  AA+ LF +EP    +YVLL+N+ + +   ++A +VR+ M   GVRKEPGCSWI+ 
Sbjct: 634 KMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDV 693

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
            +    F A D SH  S++++  LE L + ++K+GYV +T  V +++ E E+E  L  HS
Sbjct: 694 KNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 753

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLA+AFG+L  P  + IR+ KNLR C  CH   K  SKI  REII+RD+ RFH F +G 
Sbjct: 754 EKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGF 813

Query: 876 CSCGDYW 882
           CSCGDYW
Sbjct: 814 CSCGDYW 820



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%), Gaps = 22/438 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   +  N   +A+  + +M  S   P+ F F ++L A A    +  G+Q+H+ +
Sbjct: 212 TWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLI 271

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G+  +++ V   LV+MY KC +DM    +VFD++ E++ VSWNSMI        +D 
Sbjct: 272 HKHGFD-ANIFVGTALVDMYAKC-ADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDR 329

Query: 164 ALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMN 221
           A+  F+ +L    V P+  ++ SV  AC+N+    GL  GRQVHG  ++ G    T++MN
Sbjct: 330 AVGVFKDVLREKTVIPNEVSVSSVLSACANMG---GLNFGRQVHGVVVKYGLVPLTYVMN 386

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +LM MY K    D+   LF+   DRD+V+WN +V    QNDKF EA  +   M   GI P
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  S ++VL + + L  L  G  IH   ++   + +   +GS L+ MY  C  +    +V
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS-LITMYAKCGSLVDAYQV 505

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ I D  +  W AMI+ Y  +    + + LF  M    G+ P+  T   V+ AC  S  
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS-EGIEPSHVTFVCVLSAC--SHT 562

Query: 402 FPDKEGI-HGHAIK----LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
              +EG+ H +++K    +  G + Y    ++D+  R G ++ +K   + M ++ T S W
Sbjct: 563 GRVEEGLAHFNSMKKIHDMNPGPEHYA--CMVDLLGRAGWLDEAKRFIESMPMKPTPSVW 620

Query: 456 NTMITGYTICGQHGDALM 473
             ++     C ++G+  M
Sbjct: 621 GALLGA---CRKYGNLKM 635



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 278/602 (46%), Gaps = 84/602 (13%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L      + L    QIH  ++   Y  S   + N L+N+Y KCG  +     +F  IT 
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNY-TSLPFLFNNLINLYAKCGC-LNQALLLFS-ITH 204

Query: 143 ---KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV-ALACSNLSRRDG 198
              K  V+W S+I  L  F     AL  F  M  S   P+ FT  S+ + + + +    G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 199 LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            +L   +H +     + N F+  AL+ MYAK   +  A  +F    +R+LVSWN+++   
Sbjct: 265 QQLHSLIHKHGF---DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGF 321

Query: 259 SQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             N+ +  AV +F   +  + + P+ VS++SVL AC+++  L+ G+++H   ++   L+ 
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYG-LVP 380

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
            ++V ++L+DMY  CR  + G ++F  + D+ +  WN ++ G+ QN+  EEA   F  M 
Sbjct: 381 LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR 440

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
              G+ P+  + S+V+ +     A      IH   IKLG  ++  +  +L+ MY++ G +
Sbjct: 441 R-EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSL 499

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             +  +F+ +E  + +SW  MI+ Y +   HG A                N V +L E +
Sbjct: 500 VDAYQVFEGIEDHNVISWTAMISAYQL---HGCA----------------NQVIELFEHM 540

Query: 498 LRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALVDMYAK 551
           L    +P+ +T + VL  C     + +G   H  +++ +   D+  G    + +VD+  +
Sbjct: 541 LSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKI--HDMNPGPEHYACMVDLLGR 597

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            G L+ A+R  + MP                                       +KP   
Sbjct: 598 AGWLDEAKRFIESMP---------------------------------------MKPTPS 618

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP-SPDHYACVVDLLGRAGKVEDAYQLIN 670
            + AL  AC   G +  G +   ++   + +EP +P +Y  + ++  R+G++E+A ++  
Sbjct: 619 VWGALLGACRKYGNLKMGREAAERL---FEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675

Query: 671 MM 672
           +M
Sbjct: 676 LM 677



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 11/209 (5%)

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM--PVRNVITWNVI 576
           +L    +IH   I N   +   + + L+++YAKCGCLN A  +F +     + ++TW  +
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I          + L L   M   G       PN+ TF ++ +A + + MV  G  L + +
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGP-----YPNQFTFSSILSASAATMMVLHGQQL-HSL 270

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              +G + +      +VD+  +   +  A ++ + MP       +W+S++     H N+ 
Sbjct: 271 IHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPER--NLVSWNSMIVGF-FHNNLY 327

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
              +      L E  V  + V +S++ S+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSA 356


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/813 (32%), Positives = 428/813 (52%), Gaps = 113/813 (13%)

Query: 172 LYSNVEP-SSFTLVSVALACSNL-----SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALM 224
           L + V P S+  LVS+   C++L       R   RL  Q+H  ++R G   +  +  AL+
Sbjct: 35  LRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALV 94

Query: 225 AMYAKLGRVDD-AKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            + A+LGR    A+ L ++ ED  +D V WN  V+ L++ +++ EA+   R+M  RG+  
Sbjct: 95  DLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPA 154

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRR 340
           DG + A VL AC     L  G+ +HAYAL+  + +D +  V   L  MY    +V    R
Sbjct: 155 DGYTCARVLHACGRAGALREGRAVHAYALK--LALDAHPLVPGFLAGMYAENADVAAATR 212

Query: 341 VFDFIS-----------------------------------DKKIALWNAMITGYGQNEY 365
           V D +                                    +  +A WN +++G  ++  
Sbjct: 213 VLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGR 272

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
           D EAL +   M +  GL P+ATT+SS++ +   +        IH   ++  L  D Y   
Sbjct: 273 DREALGVVASMLK-QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGT 331

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVR----------------------------------- 450
           AL+DMY++ GR++ ++ + D +E R                                   
Sbjct: 332 ALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP 391

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQ--------------------NMEEEKNRNNV 490
           D  +WN +ITGY++ GQ   A++LLR+++                    N E E +    
Sbjct: 392 DITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFC 451

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
           +++ +  +  +P+ +T+  +L  C  L+   KGKE+H +A+R     D+VV +AL+DMY+
Sbjct: 452 HEMQKDGV--QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYS 509

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           K G L  A+ +F+ +  +N++  N ++    +HG+G+E +EL  +M   G     +KP+ 
Sbjct: 510 KGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSG-----LKPDS 564

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           +TF AL  AC   G+V+EG + F  M+  YG++P+ ++YAC+VDLL R G +++A   I 
Sbjct: 565 ITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIE 624

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
             P +   A  W +LL  C IH N+ + E+AA+NLF+LEP  +++Y+L+ N+Y   +++D
Sbjct: 625 RSPID-PGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYD 683

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           +A  ++  MK  GV   PG SWI+    IH F      H ++ +++  L  L  +++K G
Sbjct: 684 EAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAG 743

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG-TTIRVAKNLRVCNDCHQAT 849
           YVPDTSC+ +NV EEEKE LL GH+EKLAI +G++ +      +RV KN R+CNDCH+  
Sbjct: 744 YVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVA 803

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K IS +  R+IILRD  RFHHF +G CSC DYW
Sbjct: 804 KHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 157/664 (23%), Positives = 269/664 (40%), Gaps = 144/664 (21%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE---KDQVSWNSM 151
           L  Q+H+  V+ G       V   LV++  + G       ++     E   KD V WN  
Sbjct: 70  LAPQLHSLAVRTGLSRDP-RVTCALVDLLARLGRGP-SCARLLHEAAEDGAKDAVLWNKH 127

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +A L    +WD A+  FR M    V    +T   V  AC    R   LR GR VH  +L+
Sbjct: 128 VAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHAC---GRAGALREGRAVHAYALK 184

Query: 212 V--------------------------------GEWNTFIMNALMAMYAKLGRVDDAKTL 239
           +                                G  +    NA++A  A+LG VDDA  L
Sbjct: 185 LALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALEL 244

Query: 240 F----KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
                +S  + ++ +WNT++S  S++ +  EA+  +  M  +G++PD  +++S+L + ++
Sbjct: 245 AARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS--------- 346
             +L  G EIH + LRN +  D  + G+ALVDMY  C  ++C ++V D +          
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPD-VYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNS 363

Query: 347 --------------------------DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
                                     D  I  WN +ITGY  N    +A++L  ++ + A
Sbjct: 364 LVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAA 422

Query: 381 GLWPNATTMSSVVPACVRSEAFPD---------KEGI----------------------- 408
           G+ PN  + +S++     +  + D         K+G+                       
Sbjct: 423 GVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKG 482

Query: 409 ---HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
              H  A++     D  V  AL+DMYS+ G +  +K IF+ ++ ++ V  N M+TG  + 
Sbjct: 483 KELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVH 542

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ  +A+ L  +M N                    KP+SIT   +L  C ++  + +G E
Sbjct: 543 GQGREAIELFHDMWNSG-----------------LKPDSITFTALLTACRSMGLVTEGWE 585

Query: 526 -IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
              +   +  +       + +VD+ A+CG L+ A    +  P+      W  ++    +H
Sbjct: 586 YFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIH 645

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           G         +N+         ++P N   ++ +     +  M  E   L Y MK   G+
Sbjct: 646 GNLALAEVAARNLFI-------LEPYNSANYLLMMNLYEYERMYDEAESLKYAMKAR-GV 697

Query: 643 EPSP 646
           +  P
Sbjct: 698 DSRP 701



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 196/448 (43%), Gaps = 43/448 (9%)

Query: 270 FLRQMALR-GIKPDGVSI-ASVLPACSHLEMLDT--------GKEIHAYALRNDILIDNS 319
            L   ALR G+ P    +  S+L  C+ L   DT          ++H+ A+R  +  D  
Sbjct: 29  LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88

Query: 320 FVGSALVDMYCNC-REVECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKM 376
            V  ALVD+     R   C R + +   D  K   LWN  +    + E  +EA+ +F +M
Sbjct: 89  -VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREM 147

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           +   G+  +  T + V+ AC R+ A  +   +H +A+KL L     V   L  MY+    
Sbjct: 148 Q-ARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENAD 206

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR---NNV--- 490
           +  +  + D M     V WN ++      G   DAL L   M     E N    N V   
Sbjct: 207 VAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSG 266

Query: 491 ---YDLDETVLRP---------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
              +  D   L           +P++ T+ ++L        L  G EIH + +RN L  D
Sbjct: 267 CSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPD 326

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V  G+ALVDMYAKCG L+ A++V D +  RN+ TWN ++  Y   G     LEL++ M  
Sbjct: 327 VYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM-- 384

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
              +   + P+  T+  L    S +G  S+ + L  ++K   G+ P+   +  ++     
Sbjct: 385 ---KKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIK-AAGVTPNVVSWTSLISGSCH 440

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            G+ ED++   +    E  K G   SL+
Sbjct: 441 NGEYEDSFYFCH----EMQKDGVQPSLV 464



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 208/463 (44%), Gaps = 54/463 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   +R  + REA+     M +  ++PD     ++LK+VA    L  G +IH   
Sbjct: 259 TWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFF 318

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       V     LV+MY KCG  +    KV D +  ++  +WNS++A     G++D+
Sbjct: 319 LRNQLE-PDVYTGTALVDMYAKCGR-LDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDI 376

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE   +M  + ++P   T                                WN  I    
Sbjct: 377 ALELVELMKKNRLDPDITT--------------------------------WNGLITG-- 402

Query: 224 MAMYAKLGRVDDAKTLFKSFE----DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
              Y+  G+   A  L +  +      ++VSW +++S    N ++ ++  F  +M   G+
Sbjct: 403 ---YSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGV 459

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +P  V+++ +L AC+ L +   GKE+H +ALR     D   V +AL+DMY     +   +
Sbjct: 460 QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCD-MVVSTALIDMYSKGGSLVSAK 518

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            +F+ I  K + L NAM+TG   +    EA+ LF  M   +GL P++ T ++++ AC RS
Sbjct: 519 VIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWN-SGLKPDSITFTALLTAC-RS 576

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
                +   +  +++   G     +N   ++D+ +R G ++ +    +   +    S W 
Sbjct: 577 MGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWG 636

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRN-----NVYDLD 494
            ++TG +I G    A +  R +  +E   + N     N+Y+ +
Sbjct: 637 ALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYE 679


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/797 (32%), Positives = 421/797 (52%), Gaps = 32/797 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   + + + +    EA+ +Y +M R  +  +  AF  V+     +++   G Q+ + V
Sbjct: 414  SWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQV 473

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +  G   + V+VAN+L+ M+G  G  + D  K+FDR+ E D +SWN+MI+     G    
Sbjct: 474  IVSGLQ-NQVSVANSLITMFGNLGR-VHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK 531

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
                F  M +  + P + TL S+   C++    D    G  +H   LR   + +  ++NA
Sbjct: 532  CFLVFSDMRHHGLRPDATTLCSLMSVCAS---SDHFSHGSGIHSLCLRSSLDSSVTVINA 588

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MY+  G++ DA+ LF +   RDL+SWNT++SS  QN    +A+  L Q+      P+
Sbjct: 589  LVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPN 648

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             ++ +S L ACS    L  GK +HA  L+   L  N  VG++L+ MY  C  +E   +VF
Sbjct: 649  HLTFSSALGACSSPGALIDGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVF 707

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              +    I  +N +I GY   E   +A+ +F  M   AG+ PN  TM ++  +   S   
Sbjct: 708  QSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRS-AGIKPNYITMINIHGSFASSNDL 766

Query: 403  PD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             +    +H + I+ G   D YV N+L+ MY++ G +E S  IF+ +  ++ VSWN +I  
Sbjct: 767  HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 826

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                G   +AL L  +MQ+   + +R                 + L   L  C +L++L 
Sbjct: 827  NVQLGHGEEALKLFIDMQHAGNKLDR-----------------VCLAECLSSCASLASLE 869

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            +G ++H   +++ L +D  V +A +DMY KCG ++   +V     +R    WN +I  Y 
Sbjct: 870  EGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYA 929

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             +G  +E  E  K MVA G      KP+ VTF+AL +ACSH+G+V +G+D +  M   +G
Sbjct: 930  KYGYFKEAEETFKQMVATGR-----KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFG 984

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            + P   H  C+VDLLGR G+  +A + I  MP        W SLL + R H+N+EIG   
Sbjct: 985  VSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV-LPNDLIWRSLLSSSRTHKNLEIGRKT 1043

Query: 702  AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            A+ L  L+P   S YVLLSN+Y++   W     +R  MK + + K P CSW++  +E+  
Sbjct: 1044 AKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVST 1103

Query: 762  FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
            F  GD  H+ +E+++  L+ +  ++R+ GY+ DTS  LH+ +EE+KE  L  HSEKLA+A
Sbjct: 1104 FGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALA 1163

Query: 822  FGILNTPPGTTIRVAKN 838
            +G++  P G+T   A N
Sbjct: 1164 YGLIVVPEGSTQGSAVN 1180



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 241/493 (48%), Gaps = 33/493 (6%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + ++   +W + ++   R G    A E  R M    V  S F L S+  AC    R
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 196 RDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            +G+  G  +H  + R G   N +I  AL+ +Y   G V DA+ LF    +R++VSW  +
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM----LDTGKEIHAYAL 310
           + +LS N    EA+   RQM   G+  +  + A+V+  C  LE     L    ++    L
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +N + + NS     L+ M+ N   V    ++FD + +     WNAMI+ Y       +  
Sbjct: 479 QNQVSVANS-----LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCF 533

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           ++F  M    GL P+ATT+ S++  C  S+ F    GIH   ++  L     V NAL++M
Sbjct: 534 LVFSDMRH-HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNM 592

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           YS  G++  ++ +F +M  RD +SWNTMI+ Y       DAL  L ++ +  E       
Sbjct: 593 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNES------ 646

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                      PN +T  + L  C +  AL  GK +HA  ++  L  +++VG++L+ MY 
Sbjct: 647 -----------PNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 695

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KC  +  A +VF  MP  +++++NV+I  Y +  +G + +++   M + G     +KPN 
Sbjct: 696 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG-----IKPNY 750

Query: 611 VTFIALFAACSHS 623
           +T I +  + + S
Sbjct: 751 ITMINIHGSFASS 763



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 25/282 (8%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT---IFDDMEVRDTVSWNTMITGYTI 464
           IHG A++L L    + +N L+  Y R      +     +FD+M  R   +W T ++G   
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
           CG HG A  +LR M        R     L    L       +L+T     G    +A G 
Sbjct: 321 CGSHGKAFEMLRGM--------REPGVPLSGFAL------ASLVTACERRGRDEGIACGA 366

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
            IHA   R  L  +V +G+AL+ +Y   G ++ A+R+F  MP RNV++W  +++A   +G
Sbjct: 367 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG 426

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             +E L   + M  +G     V  N   F  + + C        G+ +  ++    G++ 
Sbjct: 427 YLEEALRAYRQMRRDG-----VPCNANAFATVVSLCGSLENEVPGLQVASQVIVS-GLQN 480

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
                  ++ + G  G+V DA +L + M  E D   +W++++
Sbjct: 481 QVSVANSLITMFGNLGRVHDAEKLFDRM-EEHDTI-SWNAMI 520



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 25/148 (16%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT---IFDDMEVRDTVSWNTMITGYTI 464
           IHG A++L L    + +N L+  Y R      +     +FD+M  R   +W T ++G   
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-ITLMTVLPGC---GALSAL 520
           CG+ G A  +LR M+                   R  P S   L +++  C   G    +
Sbjct: 98  CGRDGTAFEMLRGMRE------------------RGVPLSGFALASLVTACERRGRDEGI 139

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDM 548
           A G  IHA   R  L  +V +G AL+ +
Sbjct: 140 ACGAAIHALTHRAGLMGNVYIGRALLHL 167



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 8/131 (6%)

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAK---LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           +HG ++R+    + F  N L+A Y +         A  LF    DR   +W T VS   +
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL---EMLDTGKEIHAYALRNDILID 317
             +   A   LR M  RG+   G ++AS++ AC      E +  G  IHA   R   L+ 
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAG-LMG 156

Query: 318 NSFVGSALVDM 328
           N ++G AL+ +
Sbjct: 157 NVYIGRALLHL 167



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + ++   +W + ++   R G+   A E  R M    V  S F L S+  AC    R
Sbjct: 76  LFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 135

Query: 196 RDGLRLGRQVHGNSLRVGEW-NTFIMNALMAM 226
            +G+  G  +H  + R G   N +I  AL+ +
Sbjct: 136 DEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/797 (32%), Positives = 421/797 (52%), Gaps = 32/797 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    EA+ +Y +M R  +  +  AF  V+     +++   G Q+ + V
Sbjct: 112 SWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G   + V+VAN+L+ M+G  G  + D  K+FDR+ E D +SWN+MI+     G    
Sbjct: 172 IVSGLQ-NQVSVANSLITMFGNLGR-VHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
               F  M +  + P + TL S+   C++    D    G  +H   LR   + +  ++NA
Sbjct: 230 CFLVFSDMRHHGLRPDATTLCSLMSVCAS---SDHFSHGSGIHSLCLRSSLDSSVTVINA 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+  G++ DA+ LF +   RDL+SWNT++SS  QN    +A+  L Q+      P+
Sbjct: 287 LVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPN 346

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++ +S L ACS    L  GK +HA  L+   L  N  VG++L+ MY  C  +E   +VF
Sbjct: 347 HLTFSSALGACSSPGALIDGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVF 405

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +    I  +N +I GY   E   +A+ +F  M   AG+ PN  TM ++  +   S   
Sbjct: 406 QSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRS-AGIKPNYITMINIHGSFASSNDL 464

Query: 403 PD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            +    +H + I+ G   D YV N+L+ MY++ G +E S  IF+ +  ++ VSWN +I  
Sbjct: 465 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 524

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   +AL L  +MQ+   + +R                 + L   L  C +L++L 
Sbjct: 525 NVQLGHGEEALKLFIDMQHAGNKLDR-----------------VCLAECLSSCASLASLE 567

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G ++H   +++ L +D  V +A +DMY KCG ++   +V     +R    WN +I  Y 
Sbjct: 568 EGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYA 627

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +G  +E  E  K MVA G      KP+ VTF+AL +ACSH+G+V +G+D +  M   +G
Sbjct: 628 KYGYFKEAEETFKQMVATGR-----KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFG 682

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P   H  C+VDLLGR G+  +A + I  MP        W SLL + R H+N+EIG   
Sbjct: 683 VSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV-LPNDLIWRSLLSSSRTHKNLEIGRKT 741

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ L  L+P   S YVLLSN+Y++   W     +R  MK + + K P CSW++  +E+  
Sbjct: 742 AKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVST 801

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD  H+ +E+++  L+ +  ++R+ GY+ DTS  LH+ +EE+KE  L  HSEKLA+A
Sbjct: 802 FGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALA 861

Query: 822 FGILNTPPGTTIRVAKN 838
           +G++  P G+T   A N
Sbjct: 862 YGLIVVPEGSTQGSAVN 878



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 186/714 (26%), Positives = 328/714 (45%), Gaps = 54/714 (7%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV---AGIQDLSLG 96
           R   +W  ++    R  +   A      M    +    FA  +++ A       + ++ G
Sbjct: 4   RTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACG 63

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
             IHA   + G  + +V +   L+++YG  G  + D  ++F  + E++ VSW +++  L 
Sbjct: 64  AAIHALTHRAGL-MGNVYIGTALLHLYGSRGI-VSDAQRLFWEMPERNVVSWTALMVALS 121

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR-DGLRLGRQVHGNSLRVGEW 215
             G  + AL A+R M    V  ++    +V   C +L     GL++  QV  + L+    
Sbjct: 122 SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN--- 178

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
              + N+L+ M+  LGRV DA+ LF   E+ D +SWN ++S  S      +  +    M 
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCRE 334
             G++PD  ++ S++  C+  +    G  IH+  LR+   +D+S  V +ALV+MY    +
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS--LDSSVTVINALVNMYSAAGK 296

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL----MLFIKMEEVAGLWPNATTMS 390
           +     +F  +S + +  WN MI+ Y QN    +AL     LF   E      PN  T S
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNES-----PNHLTFS 351

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S + AC    A  D + +H   ++L L R+  V N+L+ MY +   +E ++ +F  M   
Sbjct: 352 SALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 411

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VS+N +I GY +      A+ +   M++                    KPN IT++ +
Sbjct: 412 DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG-----------------IKPNYITMINI 454

Query: 511 LPGCGALSALAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
                + + L   G+ +HAY IR    +D  V ++L+ MYAKCG L  +  +F+ +  +N
Sbjct: 455 HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKN 514

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           +++WN II A    G G+E L+L  +M   G+     K + V      ++C+    + EG
Sbjct: 515 IVSWNAIIAANVQLGHGEEALKLFIDMQHAGN-----KLDRVCLAECLSSCASLASLEEG 569

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI--NMMPPEFDKAGAWSSLLG 687
           M L + +    G++         +D+ G+ GK+++  Q++    + P+      W++L+ 
Sbjct: 570 MQL-HGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQ----QCWNTLIS 624

Query: 688 ACRIHQNVEIGEIAAQNLFLL--EPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
               +   +  E   + +     +PD  +   LLS   S A L DK +D    M
Sbjct: 625 GYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSAC-SHAGLVDKGIDYYNSM 677



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 239/489 (48%), Gaps = 33/489 (6%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           + ++   +W + ++   R G+   A E  R M    V  S F L S+  AC    R +G+
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 200 RLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G  +H  + R G   N +I  AL+ +Y   G V DA+ LF    +R++VSW  ++ +L
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM----LDTGKEIHAYALRNDI 314
           S N    EA+   RQM   G+  +  + A+V+  C  LE     L    ++    L+N +
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
            + NS     L+ M+ N   V    ++FD + +     WNAMI+ Y       +  ++F 
Sbjct: 181 SVANS-----LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS 235

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
            M    GL P+ATT+ S++  C  S+ F    GIH   ++  L     V NAL++MYS  
Sbjct: 236 DMRH-HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAA 294

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G++  ++ +F +M  RD +SWNTMI+ Y       DAL  L ++ +  E           
Sbjct: 295 GKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE----------- 343

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  PN +T  + L  C +  AL  GK +HA  ++  L  +++VG++L+ MY KC  
Sbjct: 344 ------SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNS 397

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A +VF  MP  +++++NV+I  Y +  +G + +++   M + G     +KPN +T I
Sbjct: 398 MEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG-----IKPNYITMI 452

Query: 615 ALFAACSHS 623
            +  + + S
Sbjct: 453 NIHGSFASS 461



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 37/273 (13%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-I 505
           M  R   +W T ++G   CG+ G A  +LR M+                   R  P S  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRE------------------RGVPLSGF 42

Query: 506 TLMTVLPGC---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            L +++  C   G    +A G  IHA   R  L  +V +G+AL+ +Y   G ++ A+R+F
Sbjct: 43  ALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLF 102

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
             MP RNV++W  +++A   +G  +E L   + M  +G     V  N   F  + + C  
Sbjct: 103 WEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG-----VPCNANAFATVVSLCGS 157

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
                 G+ +  ++    G++        ++ + G  G+V DA +L + M  E D   +W
Sbjct: 158 LENEVPGLQVASQVIVS-GLQNQVSVANSLITMFGNLGRVHDAEKLFDRM-EEHDTI-SW 214

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           ++++ +   HQ +          FL+  D+  H
Sbjct: 215 NAMI-SMYSHQGI------CSKCFLVFSDMRHH 240


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/757 (35%), Positives = 416/757 (54%), Gaps = 31/757 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R       F  A+L Y +M  S++ PD + FP V+KA  G+ ++ L   +H    
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +  + V + L+ +Y   G  + D  +VFD + ++D + WN M+    + G ++ A
Sbjct: 173 SLGFHVD-LFVGSALIKLYADNGY-ICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNA 230

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           +  F  M  S    +S T   +   C+    R    LG QVHG  +  G E++  + N L
Sbjct: 231 MGTFCGMRTSYSMVNSVTYTCILSICAT---RGKFCLGTQVHGLVIGSGFEFDPQVANTL 287

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +AMY+K G + DA+ LF +    D V+WN +++   QN    EA      M   G+KPD 
Sbjct: 288 VAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 347

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V+ AS LP+      L   KE+H+Y +R+ +  D  ++ SAL+D+Y    +VE  R++F 
Sbjct: 348 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD-VYLKSALIDIYFKGGDVEMARKIFQ 406

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
             +   +A+  AMI+GY  +  + +A+  F  + +  G+ PN+ TM+SV+PAC    A  
Sbjct: 407 QNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ-EGMVPNSLTMASVLPACAALAALK 465

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + +H   +K  L     V +A+ DMY++ GR++++   F  M   D++ WN+MI+ ++
Sbjct: 466 LGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFS 525

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G+   A+ L R+M  M   K  +       +     P                AL  G
Sbjct: 526 QNGKPEMAVDLFRQM-GMSGAKFDSVSLSSALSSAANLP----------------ALYYG 568

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           KE+H Y IRN  ++D  V SAL+DMY+KCG L  AR VF+LM  +N ++WN II AYG H
Sbjct: 569 KEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNH 628

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G  +E L+L   M+  G     V P+ VTF+ + +AC H+G+V EG+  F+ M  +YGI 
Sbjct: 629 GCARECLDLFHEMLRAG-----VHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIG 683

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
              +HYAC+VDL GRAG++ +A+  I  MP   D AG W +LLGACR+H NVE+ ++A++
Sbjct: 684 ARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPD-AGVWGTLLGACRLHGNVELAKLASR 742

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
           +L  L+P  + +YVLLSN+++ A  W   + VR+ MKE GV+K PG SWI+     H F 
Sbjct: 743 HLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFS 802

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           A +G+H +S +++  L +L   +RK+GYVP     LH
Sbjct: 803 AAEGNHPESVEIYLILNSLLLELRKQGYVPQPYLPLH 839



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 232/507 (45%), Gaps = 31/507 (6%)

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFK 241
           L S+  ACS+ S    ++  RQVH   +  G  +   +++ ++ +Y   GR+ D   LF 
Sbjct: 47  LESLFRACSDASV---VQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFF 103

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
             E  + + WN ++  L     F  A++F  +M    + PD  +   V+ AC  L  +  
Sbjct: 104 GLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 163

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
              +H  A      +D  FVGSAL+ +Y +   +   RRVFD +  +   LWN M+ GY 
Sbjct: 164 CMVVHNTARSLGFHVD-LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYV 222

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++     A+  F  M     +  N+ T + ++  C     F     +HG  I  G   D 
Sbjct: 223 KSGDFNNAMGTFCGMRTSYSM-VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDP 281

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V N L+ MYS+ G +  ++ +F+ M   DTV+WN +I GY   G   +A  L   M + 
Sbjct: 282 QVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISA 341

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                              KP+S+T  + LP      +L   KE+H+Y +R+ +  DV +
Sbjct: 342 G-----------------VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 384

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            SAL+D+Y K G +  AR++F    + +V     +I  Y +HG   + +   + ++ EG 
Sbjct: 385 KSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEG- 443

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               + PN +T  ++  AC+    +  G +L   +     +E   +  + + D+  + G+
Sbjct: 444 ----MVPNSLTMASVLPACAALAALKLGKELHCDILKKQ-LENIVNVGSAITDMYAKCGR 498

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGA 688
           ++ AY+    M  E D    W+S++ +
Sbjct: 499 LDLAYEFFRRM-SETDSI-CWNSMISS 523



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 23/287 (8%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           T + S+  AC  +        +H   I  G+     + + ++ +Y   GRI     +F  
Sbjct: 45  TQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFG 104

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           +E+ + + WN MI G  + G    AL+   +M         +NV           P+  T
Sbjct: 105 LELCNALPWNWMIRGLYMLGWFDFALLFYFKMLG-------SNV----------SPDKYT 147

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
              V+  CG L+ +     +H  A       D+ VGSAL+ +YA  G +  ARRVFD +P
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+ I WNV++  Y   G+    +     M     R      N VT+  + + C+  G  
Sbjct: 208 QRDTILWNVMLHGYVKSGDFNNAMGTFCGM-----RTSYSMVNSVTYTCILSICATRGKF 262

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             G  + + +    G E  P     +V +  + G + DA +L N MP
Sbjct: 263 CLGTQV-HGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMP 308


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/694 (37%), Positives = 393/694 (56%), Gaps = 51/694 (7%)

Query: 205 VHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +H    R G  ++ ++ N L+ M AK G + +A+++F + + +++ SWN I+S+ +    
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY-----ALRNDILIDN 318
              A+    +M    + P  ++ A+ L ACS L  L  G+EIHA       +R  +++D 
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILD- 178

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE-EALMLFIKME 377
               +A+  MY  C ++   + VFD I  K +  WNA+I  Y Q+ +   +AL LF KM 
Sbjct: 179 ----TAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMA 234

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG---RDRYVQNALMDMYSRM 434
           E  G+ P   T   V+ AC    +    E IH   ++ GL    RD  VQNAL++MY++ 
Sbjct: 235 E-HGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKC 290

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +E+++ IF  M+ RD VS N MI  +   G   +++ + REM             DL+
Sbjct: 291 GSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREM-------------DLE 337

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-----TDVVVGSALVDMY 549
                P+ ++ T  +V+  C    AL  GK IH   +  +L       +VVV +ALV MY
Sbjct: 338 GL---PQDDT-TFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMY 393

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            KCG L  A+ VF  M  +N ++WN ++ A    G+G E    L+    EG     V+ +
Sbjct: 394 GKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEG-----VELD 448

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
             +FI++  ACSHSGM+    D F  M  D+ + P+ ++Y C+VDLL R+G++ DA +L+
Sbjct: 449 SASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELM 508

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           N MP   D A AW +LLG CR+  ++E    AA+  F LEP   + Y LLS++YS+    
Sbjct: 509 NSMPFSPD-AIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKK 567

Query: 730 DKAMDVRKKMKEMGVRK-EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           D+ +++R  MKE G+RK  PG S IE    +H+F+AGD SH Q +++   L+ L+  +++
Sbjct: 568 DELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQ 627

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
            G+VP T  V+H++  E+KE +L  HSEKLA+AFG+++T  G  + V KNLRVC+DCH A
Sbjct: 628 AGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGA 687

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            K ISK+ SR I +RD  RFH F++GTCSCGDYW
Sbjct: 688 IKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 270/584 (46%), Gaps = 62/584 (10%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           +IQ D+FA      A+   +D +    IH  + + G G SS  + N LV M  K GS + 
Sbjct: 41  EIQSDSFA-----AAIRSCKDSNSVSIIHQKITRAGLG-SSAYLNNLLVLMLAKHGS-LC 93

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           +   +FD I  K+  SWN +I+     G    AL  F  M   +V P++ T  +   ACS
Sbjct: 94  EARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACS 150

Query: 192 NLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           +L     L+ GR++H    + R    +  +  A+ +MYAK G +  AK++F     +++V
Sbjct: 151 SLG---DLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVV 207

Query: 250 SWNTIVSSLSQN-DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           SWN ++++ +Q+     +A+    +MA  G++P   +   VL AC+ +  L+   +IHA 
Sbjct: 208 SWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE---KIHAR 264

Query: 309 ALRNDILIDNSFVG--SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            +   +  D   VG  +AL++MY  C  +E  R +F  +  +     N MI  + Q    
Sbjct: 265 IVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLG 324

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR-----DR 421
           +E++ +F +M ++ GL  + TT +SV+ AC    A    + IH   ++  LGR     + 
Sbjct: 325 KESIQVFREM-DLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNV 383

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V+ AL+ MY + G +E +K +F  M  +++VSWN M+      GQ GD           
Sbjct: 384 VVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQ-GDEAAAFLRAAAC 442

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
           E         +LD         S + ++VL  C     L    E+     + ML+   +V
Sbjct: 443 EG-------VELD---------SASFISVLIACSHSGML----EVAYDHFQLMLSDFDLV 482

Query: 542 GSA-----LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKN 595
            +A     +VD+ A+ G L  A  + + MP   + I W  ++    + G        L+N
Sbjct: 483 PAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGS-------LEN 535

Query: 596 MVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
             +   +   ++P N   +  L +  S +G   E ++L   MK+
Sbjct: 536 AASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKE 579



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 205/428 (47%), Gaps = 19/428 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS-SVTVANTLVNMYGKC 126
             + D+ P    F   L A + + DL  G++IHA + K   G+  SV +   + +MY KC
Sbjct: 130 FAKMDVPPTAMTFATALSACSSLGDLQRGREIHARI-KASRGIRPSVILDTAIFSMYAKC 188

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG-KWDLALEAFRMMLYSNVEPSSFTLVS 185
           G D+     VFDRI  K+ VSWN++IA   + G     AL+ F  M    V P   T V 
Sbjct: 189 G-DLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVG 247

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
           V  AC++++  +  ++  ++    L+    +  + NAL+ MYAK G ++ A+ +F+  + 
Sbjct: 248 VLGACNDVTSLE--KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQR 305

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           RD VS N ++++ +Q     E++   R+M L G+  D  + ASV+ ACS    L+ GK I
Sbjct: 306 RDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRI 365

Query: 306 HAY----ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           H       L     + N  V +ALV MY  C  +E  + VF  ++ K    WNAM+    
Sbjct: 366 HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACA 425

Query: 362 -QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS---EAFPDKEGIHGHAIKLGL 417
            Q + DE A  L     E  G+  ++ +  SV+ AC  S   E   D   +      L  
Sbjct: 426 HQGQGDEAAAFLRAAACE--GVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVP 483

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
             + Y    ++D+ +R GR+  +  + + M    D ++W T++ G  + G   +A     
Sbjct: 484 AAENY--RCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAE 541

Query: 477 EMQNMEEE 484
           +  N+E +
Sbjct: 542 QAFNLEPQ 549



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 16/268 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIE-MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   + + A+S       L   E M    ++P    F  VL A   +  L   ++IHA 
Sbjct: 208 SWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIHAR 264

Query: 103 VVKYG--YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           +V+ G  + +  V V N L+NMY KCGS +     +F ++  +DQVS N MIAT  + G 
Sbjct: 265 IVETGLQFDVRDVGVQNALLNMYAKCGS-LEVARDIFRKMQRRDQVSMNVMIATFAQQGL 323

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEW--- 215
              +++ FR M    +     T  SV  ACS       L  G+++H   +   +G     
Sbjct: 324 GKESIQVFREMDLEGLPQDDTTFASVITACSCCG---ALEFGKRIHKRVVEPVLGRKCCL 380

Query: 216 -NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N  +  AL++MY K G ++ AK +FK+   ++ VSWN ++++ +   +  EA  FLR  
Sbjct: 381 PNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAA 440

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
           A  G++ D  S  SVL ACSH  ML+  
Sbjct: 441 ACEGVELDSASFISVLIACSHSGMLEVA 468



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 33/215 (15%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG----LSSVT 114
           +E+I  + EM    +  D+  F +V+ A +    L  GK+IH  VV+   G    L +V 
Sbjct: 325 KESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVV 384

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V   LV+MYGKCG+ +     VF  +T K+ VSWN+M+A     G+ D A    R     
Sbjct: 385 VETALVSMYGKCGT-LEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACE 443

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-------------N 221
            VE  S + +SV +ACS              H   L V   +  +M              
Sbjct: 444 GVELDSASFISVLIACS--------------HSGMLEVAYDHFQLMLSDFDLVPAAENYR 489

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIV 255
            ++ + A+ GR+ DA  L  S     D ++W T++
Sbjct: 490 CMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLL 524


>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Cucumis sativus]
          Length = 873

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/751 (33%), Positives = 421/751 (56%), Gaps = 32/751 (4%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           +AI  +++M    +++P      ++L   + +    +GK IH+ V+K G    ++ V N 
Sbjct: 128 KAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL-VGNA 186

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++MY K G   +D Y  F+ I  KD V+WN++I+ L        AL+ F +ML   +EP
Sbjct: 187 LISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEP 246

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDA 236
           +  T+  +   C++       R G+++HG   R  E   +  + NALM +Y ++G++++A
Sbjct: 247 NYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEA 306

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF   + RDLVSWNT++S  S NDK+LEAV    ++   G  PD V++ SVLPAC++ 
Sbjct: 307 EILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYS 366

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           + L  GK IH Y LR+ +L ++S VG+ALV  Y  C +V+     F  IS K +  WN++
Sbjct: 367 QNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSV 426

Query: 357 ITGYGQ-NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +  + +     +   +L + + E     P+  T+ S++  C+        + +H ++++ 
Sbjct: 427 LNAFAEFGNTTQFPRLLHLMLRE--RFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRA 484

Query: 416 GLGRDRY---VQNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMITGYTICGQHGDA 471
            L    Y   + NAL+D YS+ G I+ +  IF+     R+ V+ N+MI+ Y  C    DA
Sbjct: 485 CLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDA 544

Query: 472 LMLLREMQN--------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGAL 517
           L +   M          M      NN       + R       KP+++++M++LP C  L
Sbjct: 545 LTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNEL 604

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           ++    KE H Y+ R+    DV +  AL+D YAKCG ++ A ++F+    ++++ +  +I
Sbjct: 605 ASFRLLKECHGYSFRSRF-EDVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMI 663

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             Y +HG G+E L++  NM+  G     VKP+ V   ++ +ACSH+G+V +G+++F+ M+
Sbjct: 664 SGYAIHGMGEEALKVFTNMLESG-----VKPDHVVVTSILSACSHTGLVDQGLNIFHSME 718

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           +   I+P+ +HYACVVDLL R G+++DAY  +  MP + D A  W +LLGAC+ H  VE+
Sbjct: 719 EVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPD-ANIWGTLLGACKTHHEVEL 777

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           G + A+ LF  + D   +YV++SN+Y++   WD  ++VRK MKE  ++K PGCSWIE   
Sbjct: 778 GLVVAEQLFETKADDIGNYVVMSNLYAADAKWDGVLEVRKLMKEKELKKPPGCSWIEVEG 837

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           E + FLAGD  H Q   ++  L  L +++++
Sbjct: 838 EKNFFLAGDSLHPQRNMIYNLLNTLHQQIKR 868



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 191/753 (25%), Positives = 370/753 (49%), Gaps = 94/753 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIE--MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW  ++R+   + + +E +  ++      S  +PDN  F A+ K+ A +  +++GK +  
Sbjct: 8   SWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKALQG 67

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           + VK G  ++  +V   L+N+Y +CG+   + +K+F+++  +D V+WN +++  CR    
Sbjct: 68  YAVKQG-EIACQSVYKGLLNLYARCGA-FDECWKLFEQLNHRDVVTWNIILSGYCRSQIH 125

Query: 162 DL-ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           D  A+  F +M     V+PS+ T+ S+   CS + +  G+ +G+ +H   ++ G + +T 
Sbjct: 126 DTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGK--GV-VGKSIHSFVMKSGLDRDTL 182

Query: 219 IMNALMAMYAKLGRV-DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           + NAL++MYAK G+   DA   F S   +D+V+WNTI+S+L++ +   +A+     M   
Sbjct: 183 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 242

Query: 278 GIKPDGVSIASVLPACSHLE---MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            I+P+ ++IA +LP C+          GKEIH Y  R   LI++  V +AL+++Y    +
Sbjct: 243 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 302

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E    +F  +  + +  WN +I+GY  N+   EA+  F K+    G  P++ T+ SV+P
Sbjct: 303 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKL-LCLGSDPDSVTLISVLP 361

Query: 395 ACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
           AC  S+     + IHG+ ++   L  D  V NAL+  Y++   ++ +   F  +  +D +
Sbjct: 362 ACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLI 421

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN+++  +    + G+     R +  M  E              R KP+  T+++++  
Sbjct: 422 SWNSVLNAF---AEFGNTTQFPRLLHLMLRE--------------RFKPDHFTILSIINF 464

Query: 514 CGALSALAKGKEIHAYAIRNMLAT---DVVVGSALVDMYAKCGCLNFARRVFDL------ 564
           C  +    K KE+H Y++R  L        + +AL+D Y+KCG +++A ++F+       
Sbjct: 465 CITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRN 524

Query: 565 --------------------------MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
                                     M   ++ TWN++I  Y  +   ++ L L + +  
Sbjct: 525 LVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQI 584

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP---DHY--ACVV 653
           +G     +KP+ V+ ++L   C+        +  F  +K+ +G        D Y    ++
Sbjct: 585 KG-----MKPDAVSIMSLLPVCNE-------LASFRLLKECHGYSFRSRFEDVYLDGALL 632

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF-LLEPDV 712
           D   + G V+ AY+L      +      ++S++    IH    +GE A +    +LE  V
Sbjct: 633 DAYAKCGAVDCAYKLFESSSQK--DLVMFTSMISGYAIHG---MGEEALKVFTNMLESGV 687

Query: 713 ASHYVLLSNIYSSAQ---LWDKAMDVRKKMKEM 742
              +V++++I S+     L D+ +++   M+E+
Sbjct: 688 KPDHVVVTSILSACSHTGLVDQGLNIFHSMEEV 720



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 242/488 (49%), Gaps = 38/488 (7%)

Query: 144 DQVSWNSMIATLCRFGKWDLALEAF--RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           D  SW+S I  LC   K    L  F  +    S  +P +    ++  +C+ L     + +
Sbjct: 5   DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALF---AINI 61

Query: 202 GRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL-- 258
           G+ + G +++ GE     +   L+ +YA+ G  D+   LF+    RD+V+WN I+S    
Sbjct: 62  GKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCR 121

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           SQ        +F++  A   +KP  ++IAS+LP CS +     GK IH++ +++ +  D 
Sbjct: 122 SQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRD- 180

Query: 319 SFVGSALVDMYCNCREVEC-GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           + VG+AL+ MY    +        F+ I  K +  WN +I+   +     +AL LF  M 
Sbjct: 181 TLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLML 240

Query: 378 EVAGLWPNATTMSSVVPACV---RSEAFPDKEGIHGHA-IKLGLGRDRYVQNALMDMYSR 433
           E   + PN  T++ ++P C     + +    + IHG+   +  L  D  V NALM++Y R
Sbjct: 241 E-EPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLR 299

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
           +G++E ++ +F  ++ RD VSWNT+I+GY++  +  +A+    ++               
Sbjct: 300 VGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKL--------------- 344

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKC 552
               L   P+S+TL++VLP C     L  GK IH Y +R+ +L+ D  VG+ALV  Y KC
Sbjct: 345 --LCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKC 402

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
             +  A   F L+  +++I+WN ++ A+   G   +   LL  M+ E       KP+  T
Sbjct: 403 NDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRE-----RFKPDHFT 457

Query: 613 FIALFAAC 620
            +++   C
Sbjct: 458 ILSIINFC 465



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 231/482 (47%), Gaps = 52/482 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   + ++++ EA+  + ++      PD+    +VL A A  Q+L +GK IH ++
Sbjct: 320 SWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYI 379

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +++       TV N LV+ Y KC +D+   +  F  I+ KD +SWNS++     FG    
Sbjct: 380 LRHPVLSEDSTVGNALVSFYTKC-NDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQ 438

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV----GEWNTFI 219
                 +ML    +P  FT++S+   C  ++   G ++ ++VH  S+R      ++   I
Sbjct: 439 FPRLLHLMLRERFKPDHFTILSIINFC--ITVLGGCKV-KEVHCYSVRACLFEADYGPTI 495

Query: 220 MNALMAMYAKLGRVD--------------------------------DAKTLFKSFEDRD 247
           +NAL+  Y+K G +D                                DA T+F    + D
Sbjct: 496 LNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETD 555

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           L +WN ++   ++N+   +A+   R++ ++G+KPD VSI S+LP C+ L      KE H 
Sbjct: 556 LTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELASFRLLKECHG 615

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           Y+ R+    ++ ++  AL+D Y  C  V+C  ++F+  S K + ++ +MI+GY  +   E
Sbjct: 616 YSFRSR--FEDVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGE 673

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG---HAIKLGLGRDRYVQ 424
           EAL +F  M E +G+ P+   ++S++ AC  +        I       I +    + Y  
Sbjct: 674 EALKVFTNMLE-SGVKPDHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYA- 731

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
             ++D+ +R GRI+ + +    M ++ D   W T++     C  H +  + L   + + E
Sbjct: 732 -CVVDLLARGGRIKDAYSFVIGMPIQPDANIWGTLLGA---CKTHHEVELGLVVAEQLFE 787

Query: 484 EK 485
            K
Sbjct: 788 TK 789



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 199/385 (51%), Gaps = 31/385 (8%)

Query: 247 DLVSWNTIVSSLSQNDKFLEAV-MFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKE 304
           D  SW++ + +L  N K  E + +F+ +     G KPD    A++  +C+ L  ++ GK 
Sbjct: 5   DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKA 64

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +  YA++   +   S V   L+++Y  C   +   ++F+ ++ + +  WN +++GY +++
Sbjct: 65  LQGYAVKQGEIACQS-VYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQ 123

Query: 365 -YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            +D +A+ LF+KM     + P+A T++S++P C R       + IH   +K GL RD  V
Sbjct: 124 IHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLV 183

Query: 424 QNALMDMYSRMGRIEI-SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            NAL+ MY++ G+    +   F+ +  +D V+WNT+I+         DAL L   M    
Sbjct: 184 GNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLM---- 239

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS---ALAKGKEIHAYAIRNM-LATD 538
                     L+E +   +PN IT+  +LP C +     +   GKEIH Y  R   L  D
Sbjct: 240 ----------LEEPI---EPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIED 286

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + V +AL+++Y + G +  A  +F  +  R++++WN +I  Y ++ +  E ++    ++ 
Sbjct: 287 ISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLC 346

Query: 599 EGSRGGEVKPNEVTFIALFAACSHS 623
            GS      P+ VT I++  AC++S
Sbjct: 347 LGS-----DPDSVTLISVLPACAYS 366


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/547 (42%), Positives = 329/547 (60%), Gaps = 26/547 (4%)

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R++FD +   +  LWN ++ GY +N   ++A+ ++ KM  + G+ P+  T   V+ AC 
Sbjct: 88  ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHL-GVRPDPFTFPFVIKACA 146

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                    G+HGH +K GL     V+  LM MY + G +  ++ +F  M  RD V+WN 
Sbjct: 147 ELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNA 206

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I      G    AL   REM                  +   KP+S+T+++ L  CG L
Sbjct: 207 LIAVCVQTGFSSKALQSFREM-----------------GMAGIKPDSVTIVSALSACGHL 249

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
             L  G+EI+ +A    + ++++V +A +DM AKCG ++ A  +FD MP RNVI+W+ +I
Sbjct: 250 GCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVI 309

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM- 636
             Y ++GE ++ L L   M  +G     V+PN VTF+A+ +ACSH+G V+EG   F  M 
Sbjct: 310 GGYAVNGESEKALALFSRMKNQG-----VQPNYVTFLAVLSACSHTGRVNEGWQYFNFMA 364

Query: 637 -KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
             DD  I+P  +HYAC+VDLLGR+G +E+AY  I +MP E D  G W +LLGAC IHQN+
Sbjct: 365 QSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEAD-PGIWGALLGACAIHQNI 423

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           ++G+  A  LF L P++AS++VLLSN+Y++A  W     VR++MK+ G RK    S +EF
Sbjct: 424 KLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEF 483

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
             EIH    GD SH QS  +   LE+L ++M+  GY+P+T  V H+V +EEKE+ L  HS
Sbjct: 484 NGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHS 543

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLAIAF ++N  P   IRV KNLR+C DCH   K +S+I  REII+RD  RFHHFKNG 
Sbjct: 544 EKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGI 603

Query: 876 CSCGDYW 882
           CSC D+W
Sbjct: 604 CSCKDFW 610



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 144/269 (53%), Gaps = 6/269 (2%)

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
           DM    ++FD + +     WN+++    + G  D A+  +  M +  V P  FT   V  
Sbjct: 84  DMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIK 143

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC+ L+    L  G  +HG+ ++ G E+   +   LM MY K G +  A+ LF S  +RD
Sbjct: 144 ACAELAE---LWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERD 200

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           LV+WN +++   Q     +A+   R+M + GIKPD V+I S L AC HL  L+TG+EI+ 
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE 260

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
           +A R + +  N  V +A +DM   C +++    +FD +  + +  W+ +I GY  N   E
Sbjct: 261 FA-REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESE 319

Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           +AL LF +M+   G+ PN  T  +V+ AC
Sbjct: 320 KALALFSRMKN-QGVQPNYVTFLAVLSAC 347



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 6/270 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++   ++    +A+  Y +M    ++PD F FP V+KA A + +L  G  +H HVV
Sbjct: 103 WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVV 162

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+G    +  V   L+ MY K G ++     +F  + E+D V+WN++IA   + G    A
Sbjct: 163 KHGLEFVA-AVRTELMIMYVKFG-ELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKA 220

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L++FR M  + ++P S T+VS   AC +L     L  G +++  +   G + N  + NA 
Sbjct: 221 LQSFREMGMAGIKPDSVTIVSALSACGHLG---CLETGEEIYEFAREEGIDSNIIVHNAR 277

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + M AK G +D A  LF     R+++SW+T++   + N +  +A+    +M  +G++P+ 
Sbjct: 278 LDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNY 337

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRND 313
           V+  +VL ACSH   ++ G +   +  ++D
Sbjct: 338 VTFLAVLSACSHTGRVNEGWQYFNFMAQSD 367


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 277/828 (33%), Positives = 425/828 (51%), Gaps = 112/828 (13%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
           + + S  +Q+HA ++       +  VA  L+N   +  +     + +F+     +   + 
Sbjct: 11  VGNFSHLRQLHAQIIHNSLHHHNYWVA-LLINHCTRLRAPPHYTHLLFNSTLNPNVFVFT 69

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           SM+            +  F  M    V P +F    +  +  N         G   H + 
Sbjct: 70  SMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG--------GIGFHAHV 121

Query: 210 LRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLE 266
           L++G   + F+ NA++ MYA+LG +  A+ +F    D  R +  WN +VS   + +   +
Sbjct: 122 LKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQ 181

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           A      M  R                                        N    +A+V
Sbjct: 182 AQWLFDVMPER----------------------------------------NVITWTAMV 201

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
             Y   +++E  RR FD + ++ +  WNAM++GY QN   EE L LF +M   AG+ P+ 
Sbjct: 202 TGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN-AGIEPDE 260

Query: 387 TTMSSVVPAC------------VRS-------------EAFPD---KEGIHGHAIK---- 414
           TT  +V+ AC            VR+              A  D   K G  G A +    
Sbjct: 261 TTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDE 320

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           LG  R+    NA++  Y+R+G ++ ++ +F+ M  R+ V+WN+MI GY   GQ   A+ L
Sbjct: 321 LGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 380

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
            +EM                 T  +  P+ +T+++V+  CG L AL  G  +  +   N 
Sbjct: 381 FKEMI----------------TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 424

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           +   +   +A++ MY++CG +  A+RVF  M  R+V+++N +I  +  HG G E + L+ 
Sbjct: 425 IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 484

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M     + G ++P+ VTFI +  ACSH+G++ EG  +F  +KD     P+ DHYAC+VD
Sbjct: 485 TM-----KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVD 534

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGR G++EDA + +  MP E   AG + SLL A RIH+ VE+GE+AA  LF LEPD + 
Sbjct: 535 LLGRVGELEDAKRTMERMPME-PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSG 593

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
           +++LLSNIY+SA  W     +R+ MK+ GV+K  G SW+E+G ++HKF+  D SH++S+ 
Sbjct: 594 NFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDD 653

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  L  L ++MR+ GY+ D SCVL +V EEEKE ++  HSEKLAI + +L +  G  IR
Sbjct: 654 IYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIR 713

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           V KNLRVC DCH A K ISK+E R II+RD  RFH F +G CSC DYW
Sbjct: 714 VVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 236/570 (41%), Gaps = 138/570 (24%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR  +      + +L +  M    ++PD F +P ++K+       + G   HAHV+K G+
Sbjct: 72  LRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-----NGGIGFHAHVLKLGH 126

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIATLCRFGKWDLALE 166
           G S   V N +++MY + G  +    KVFD I   E+    WN+M++     G W    E
Sbjct: 127 G-SDAFVRNAVIDMYARLGP-IGHARKVFDEIPDYERKVADWNAMVS-----GYWKWESE 179

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
                L+ +V P                                   E N     A++  
Sbjct: 180 GQAQWLF-DVMP-----------------------------------ERNVITWTAMVTG 203

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK+  ++ A+  F    +R +VSWN ++S  +QN    E +    +M   GI+PD  + 
Sbjct: 204 YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTW 263

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDI----LIDNSFVGSALVDMYCNCREVECGRRVF 342
            +V+ ACS       G    A +L   +    +  N FV +AL+DMY  C  +   RR+F
Sbjct: 264 VTVISACS-----SRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIF 318

Query: 343 DFIS--------------------------------DKKIALWNAMITGYGQNEYDEEAL 370
           D +                                  + +  WN+MI GY QN     A+
Sbjct: 319 DELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 378

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH--AIKLGLGRDRYV----- 423
            LF +M     L P+  TM SV+ AC             GH  A++LG    R++     
Sbjct: 379 ELFKEMITAKKLTPDEVTMVSVISAC-------------GHLGALELGNWVVRFLTENQI 425

Query: 424 ------QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
                  NA++ MYSR G +E +K +F +M  RD VS+NT+I+G+   G   +A+ L+  
Sbjct: 426 KLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMST 485

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M+    E                 P+ +T + VL  C     L +G+++      ++   
Sbjct: 486 MKEGGIE-----------------PDRVTFIGVLTACSHAGLLEEGRKV----FESIKDP 524

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +   + +VD+  + G L  A+R  + MP+
Sbjct: 525 AIDHYACMVDLLGRVGELEDAKRTMERMPM 554



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 161/345 (46%), Gaps = 58/345 (16%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD----LSL 95
           R   SW   L   A++    E +  + EM  + I+PD   +  V+ A +   D     SL
Sbjct: 223 RSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS--------DMWDVYK------------ 135
            + +H   ++      +  V   L++MY KCGS        D    Y+            
Sbjct: 283 VRTLHQKQIQL-----NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAY 337

Query: 136 -----------VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTL 183
                      +F+ +  ++ V+WNSMIA   + G+  +A+E F+ M+ +  + P   T+
Sbjct: 338 TRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 397

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-----NALMAMYAKLGRVDDAKT 238
           VSV  AC +L     L LG  V    +R    N   +     NA++ MY++ G ++DAK 
Sbjct: 398 VSVISACGHLG---ALELGNWV----VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 450

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F+    RD+VS+NT++S  + +   +EA+  +  M   GI+PD V+   VL ACSH  +
Sbjct: 451 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 510

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           L+ G+++  +    D  ID+    + +VD+     E+E  +R  +
Sbjct: 511 LEEGRKV--FESIKDPAIDHY---ACMVDLLGRVGELEDAKRTME 550


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/628 (37%), Positives = 357/628 (56%), Gaps = 56/628 (8%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG------- 338
            + +L +C     L  GK++H+  + +    D  F+ + L+++Y  C +++         
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDK-FISNHLLNLYSKCGQLDTAITLFGVM 113

Query: 339 ------------------------RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                                   R++FD + ++ +A WNAM+ G  Q E++EE L LF 
Sbjct: 114 PRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFS 173

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M E+ G  P+   + SV+  C    A      +HG+  K G   +  V ++L  MY + 
Sbjct: 174 RMNEL-GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC 232

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +   + +   M  ++ V+WNT+I G     Q+G    +L +   M+    R       
Sbjct: 233 GSLGEGERLIRAMPSQNVVAWNTLIAGR---AQNGYPEEVLDQYNMMKMAGFR------- 282

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P+ IT ++V+  C  L+ L +G++IHA  I+   +  V V S+L+ MY++CGC
Sbjct: 283 -------PDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGC 335

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L ++ +VF      +V+ W+ +I AYG HG G E ++L   M  E     +++ N+VTF+
Sbjct: 336 LEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE-----KLEANDVTFL 390

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L  ACSH G+  +G+  F  M + YG++P  +HY C+VDLLGR G VE+A  LI  MP 
Sbjct: 391 SLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPV 450

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           + D    W +LL AC+IH+  E+    ++ +F L+P     YVLLSNI++S + WD   D
Sbjct: 451 KADVI-TWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSD 509

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK M++  ++KEPG SW+E  ++IH+F  GD SH +S ++  +L  L+  M+K GYVPD
Sbjct: 510 VRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPD 569

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
              VLH+++ E+KE  L  HSEKLAIAF +L TP GT IRV KNLRVC+DCH A K+IS+
Sbjct: 570 IDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISE 629

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I +REII+RD  RFHHFKNG CSCGDYW
Sbjct: 630 ISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 204/429 (47%), Gaps = 43/429 (10%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-- 128
           S I  +   F  +L++      LSLGKQ+H+ ++  G   S   ++N L+N+Y KCG   
Sbjct: 46  SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCS-SDKFISNHLLNLYSKCGQLD 104

Query: 129 ----------------------------DMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
                                       D     K+FD + E++  +WN+M+A L +F  
Sbjct: 105 TAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEF 164

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
            +  L  F  M      P  F L SV   C+ L     L  GRQVHG   + G E+N  +
Sbjct: 165 NEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLR---ALVAGRQVHGYVRKCGFEFNLVV 221

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           +++L  MY K G + + + L ++   +++V+WNT+++  +QN    E +     M + G 
Sbjct: 222 VSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGF 281

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +PD ++  SV+ +CS L  L  G++IHA  ++    +  S + S+L+ MY  C  +E   
Sbjct: 282 RPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI-SSLISMYSRCGCLEYSL 340

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VF    +  +  W++MI  YG +    EA+ LF +ME+   L  N  T  S++ AC  S
Sbjct: 341 KVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQ-EKLEANDVTFLSLLYAC--S 397

Query: 400 EAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
                ++GI    +   K G+         ++D+  R G +E ++ +   M V+ D ++W
Sbjct: 398 HCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITW 457

Query: 456 NTMITGYTI 464
            T+++   I
Sbjct: 458 KTLLSACKI 466



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 206/470 (43%), Gaps = 68/470 (14%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
              LC  G    A + F   ++S  EPS F+ +  +    N      L LG+Q+H   + 
Sbjct: 28  FTNLCSKGHLKQAFDRFSSHIWS--EPSLFSHLLQSCISEN-----SLSLGKQLHSLIIT 80

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLF----------------------------KS 242
            G   + FI N L+ +Y+K G++D A TLF                            K 
Sbjct: 81  SGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKM 140

Query: 243 FE---DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+   +R++ +WN +V+ L Q +   E +    +M   G  PD  ++ SVL  C+ L  L
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRAL 200

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+++H Y +R      N  V S+L  MY  C  +  G R+   +  + +  WN +I G
Sbjct: 201 VAGRQVHGY-VRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAG 259

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
             QN Y EE L  +  M ++AG  P+  T  SV+ +C         + IH   IK G   
Sbjct: 260 RAQNGYPEEVLDQY-NMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASL 318

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
              V ++L+ MYSR G +E S  +F + E  D V W++MI  Y   G HG  +  +    
Sbjct: 319 IVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAY---GFHGRGVEAIDLFN 375

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-----IHAYAIRNM 534
            ME+EK               + N +T +++L  C       KG +     +  Y ++  
Sbjct: 376 QMEQEK--------------LEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPR 421

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
           L       + +VD+  + G +  A  +   MPV+ +VITW  ++ A  +H
Sbjct: 422 LEHY----TCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIH 467



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 22/325 (6%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           +W   +  S ++ +C+   +    + +H   I  G   D+++ N L+++YS+ G+++ + 
Sbjct: 48  IWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAI 107

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           T+F  M  ++ +S N +I GY   G    A  +  EM           V  L +     +
Sbjct: 108 TLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEE 167

Query: 502 --------------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                         P+   L +VL GC  L AL  G+++H Y  +     ++VV S+L  
Sbjct: 168 GLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH 227

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY KCG L    R+   MP +NV+ WN +I     +G  +EVL+    M   G R     
Sbjct: 228 MYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFR----- 282

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+++TF+++ ++CS    + +G  +  ++    G        + ++ +  R G +E  Y 
Sbjct: 283 PDKITFVSVISSCSELATLGQGQQIHAEVIKA-GASLIVSVISSLISMYSRCGCLE--YS 339

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH 692
           L   +  E      WSS++ A   H
Sbjct: 340 LKVFLECENGDVVCWSSMIAAYGFH 364



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 135/244 (55%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E +  +  M      PD FA  +VL+  AG++ L  G+Q+H +V K G+  + V V+ +L
Sbjct: 167 EGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVS-SL 225

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            +MY KCGS + +  ++   +  ++ V+WN++IA   + G  +  L+ + MM  +   P 
Sbjct: 226 AHMYMKCGS-LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPD 284

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
             T VSV  +CS L+    L  G+Q+H   ++ G      ++++L++MY++ G ++ +  
Sbjct: 285 KITFVSVISSCSELAT---LGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLK 341

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F   E+ D+V W++++++   + + +EA+    QM    ++ + V+  S+L ACSH  +
Sbjct: 342 VFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGL 401

Query: 299 LDTG 302
            + G
Sbjct: 402 KEKG 405



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 115/225 (51%), Gaps = 12/225 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++    E +  Y  M  +  +PD   F +V+ + + +  L  G+QIHA V
Sbjct: 252 AWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEV 311

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G  L  V+V ++L++MY +CG   + + KVF      D V W+SMIA     G+   
Sbjct: 312 IKAGASL-IVSVISSLISMYSRCGCLEYSL-KVFLECENGDVVCWSSMIAAYGFHGRGVE 369

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLR---LGRQVHGNSLRVGEWNTFI 219
           A++ F  M    +E +  T +S+  ACS+   ++ G++   L  + +G   R+  +    
Sbjct: 370 AIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHY---- 425

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDK 263
              ++ +  + G V++A+ L +S   + D+++W T++S+   + K
Sbjct: 426 -TCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKK 469



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 14/187 (7%)

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  E  N+  + +    +D   + +  +P+  +   +L  C + ++L+ GK++H+  I +
Sbjct: 24  LTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFS--HLLQSCISENSLSLGKQLHSLIITS 81

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
             ++D  + + L+++Y+KCG L+ A  +F +MP +N+++ N++I  Y   G+     ++ 
Sbjct: 82  GCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMF 141

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             M            N  T+ A+ A         EG+ LF +M +   +   PD +A   
Sbjct: 142 DEMPER---------NVATWNAMVAGLIQFEFNEEGLGLFSRMNE---LGFLPDEFALGS 189

Query: 654 DLLGRAG 660
            L G AG
Sbjct: 190 VLRGCAG 196


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/582 (39%), Positives = 343/582 (58%), Gaps = 29/582 (4%)

Query: 303  KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
            +++H  A  + +L  N  V + LV  Y   R ++    +FD +  +    W+ M+ G+ +
Sbjct: 755  RQVHXQASVHGML-QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 813

Query: 363  NEYDEEALMLFIKMEEV--AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
                 + +  F    E+   G  P+  T+  V+ AC   +       IH    K GL  D
Sbjct: 814  VG---DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 870

Query: 421  RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
             +V  AL+DMY +   IE ++ +FD M  RD V+W  MI GY  CG   ++L+L  +M+ 
Sbjct: 871  HFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR- 929

Query: 481  MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                         +E V+   P+ + ++TV+  C  L A+ K + I  Y  R     DV+
Sbjct: 930  -------------EEGVV---PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 973

Query: 541  VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            +G+A++DM+AKCGC+  AR +FD M  +NVI+W+ +I AYG HG+G++ L+L   M+  G
Sbjct: 974  LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 1033

Query: 601  SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                 + PN++T ++L  ACSH+G+V EG+  F  M +DY +     HY CVVDLLGRAG
Sbjct: 1034 -----ILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAG 1088

Query: 661  KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            ++++A +LI  M  E D+ G W + LGACR H++V + E AA +L  L+P    HY+LLS
Sbjct: 1089 RLDEALKLIXSMTXEKDE-GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLS 1147

Query: 721  NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            NIY++A  W+    +R  M +  ++K PG +WIE  ++ H+F  GD +H +S++++  L+
Sbjct: 1148 NIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 1207

Query: 781  NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            +L  ++   GYVPDT+ VLH+V+EE K  +L  HSEKLAIAFG++ TP  T IR+ KNLR
Sbjct: 1208 SLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 1267

Query: 841  VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            VC DCH   K +S I  R II+RD  RFHHFK G CSCGDYW
Sbjct: 1268 VCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309



 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/555 (37%), Positives = 324/555 (58%), Gaps = 32/555 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S L  C +L  +   +++HA A  + +L +N  V + L+  Y   R ++    +FD +  
Sbjct: 67  SALVNCRNLTQV---RQVHAQASVHGML-ENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEV--AGLWPNATTMSSVVPACVRSEAFPDK 405
           +    W+ M+ G+ +     + +  F    E+   G  P+  T+  V+ AC   +     
Sbjct: 123 RDSVSWSVMVGGFAKVG---DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG 179

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             IH    K GL  D +V  AL+DMY +   IE ++ +FD M+ RD V+W  MI GY  C
Sbjct: 180 RLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 239

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G+  ++L+L  +M+              +E V+   P+ + ++TV+  C  L A+ K + 
Sbjct: 240 GKANESLVLFEKMR--------------EEGVV---PDKVAMVTVVFACAKLGAMHKARI 282

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           I  Y  R     DV++G+A++DMYAKCGC+  AR +FD M  +NVI+W+ +I AYG HG+
Sbjct: 283 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 342

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G++ L+L   M++ G     + P+++T  +L  ACSH+G+V EG+  F  M +DY +   
Sbjct: 343 GRKALDLFPMMLSSG-----MLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTD 397

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY CVVDLLGRAG++++A +LI  M  E D+ G W + LGACR H++V + E AA +L
Sbjct: 398 VKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDE-GLWGAFLGACRTHKDVVLAEKAATSL 456

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             L+     HYVLLSNIY++A  W+    +R  M +  ++K PG +WIE  ++ H+F  G
Sbjct: 457 LELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVG 516

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D +H +S++++  L++LS ++   GYVPDT+ VLH+V+EE K  +L  HSEKLAIAFG++
Sbjct: 517 DTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLI 576

Query: 826 NTPPGTTIRVAKNLR 840
            TP  T IR+ KNLR
Sbjct: 577 ATPEHTPIRIIKNLR 591



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 208/410 (50%), Gaps = 17/410 (4%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           + A+   ++L+  +Q+HA    +G  L ++ VAN L+  Y    + + D Y +FD +  +
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGM-LENIVVANKLIYFYSYYRA-LDDAYGLFDGMCVR 123

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           D VSW+ M+    + G +      FR ++     P ++TL  V  AC +L     L++GR
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK---NLQMGR 180

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
            +H    + G + + F+  AL+ MY K   ++DA+ LF   ++RDLV+W  ++   ++  
Sbjct: 181 LIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECG 240

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           K  E+++   +M   G+ PD V++ +V+ AC+ L  +   + I  Y  R    +D   +G
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD-VILG 299

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           +A++DMY  C  VE  R +FD + +K +  W+AMI  YG +    +AL LF  M   +G+
Sbjct: 300 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS-SGM 358

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIEI 439
            P+  T++S++ AC  S A   +EG+   +       +  D      ++D+  R GR++ 
Sbjct: 359 LPDKITLASLLYAC--SHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDE 416

Query: 440 SKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           +  +   M + +D   W   +     C  H D ++  +   ++ E +++N
Sbjct: 417 ALKLIKSMTIEKDEGLWGAFLGA---CRTHKDVVLAEKAATSLLELQSQN 463



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 197/402 (49%), Gaps = 17/402 (4%)

Query: 92   DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            +L+  +Q+H     +G  L ++ VAN LV  Y    + + D Y +FD +  +D VSW+ M
Sbjct: 750  NLTQVRQVHXQASVHGM-LQNLIVANKLVXFYSYYRA-LDDAYGLFDGMCVRDSVSWSVM 807

Query: 152  IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
            +    + G +      FR ++     P ++TL  V  AC +L     L++GR +H    +
Sbjct: 808  VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLK---NLQMGRLIHHIVYK 864

Query: 212  VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
             G + + F+  AL+ MY K   ++DA+ LF    +RDLV+W  ++   ++     E+++ 
Sbjct: 865  FGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVL 924

Query: 271  LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              +M   G+ PD V++ +V+ AC+ L  +   + I  Y  R    +D   +G+A++DM+ 
Sbjct: 925  FDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD-VILGTAMIDMHA 983

Query: 331  NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
             C  VE  R +FD + +K +  W+AMI  YG +    +AL LF  M   +G+ PN  T+ 
Sbjct: 984  KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR-SGILPNKITLV 1042

Query: 391  SVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            S++ AC  S A   +EG+   +       +  D      ++D+  R GR++ +  +   M
Sbjct: 1043 SLLYAC--SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100

Query: 448  EV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
               +D   W   +     C  H D  +  +   ++ E + +N
Sbjct: 1101 TXEKDEGLWGAFLGA---CRTHKDVXLAEKAATSLLELQPQN 1139



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 11/285 (3%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +   A+   +     ++ E+ R   +PDN+  P V++A   +++L +
Sbjct: 119 GMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM 178

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ IH  V K+G  L     A  LV+MY KC  ++ D   +FD++ E+D V+W  MI   
Sbjct: 179 GRLIHHIVYKFGLDLDHFVCA-ALVDMYVKC-REIEDARFLFDKMQERDLVTWTVMIGGY 236

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR-LGRQVHGNSLRVGE 214
              GK + +L  F  M    V P    +V+V  AC+ L      R +   +     ++  
Sbjct: 237 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL-- 294

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  +  A++ MYAK G V+ A+ +F   E+++++SW+ ++++   + +  +A+     M
Sbjct: 295 -DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 353

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA-----YALRNDI 314
              G+ PD +++AS+L ACSH  +++ G    +     Y++R D+
Sbjct: 354 LSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDV 398



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 11/285 (3%)

Query: 36   GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
            G   R   SW   +   A+   +     ++ E+ R   +PDN+  P V++A   +++L +
Sbjct: 795  GMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM 854

Query: 96   GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            G+ IH  V K+G  L     A  LV+MYGKC  ++ D   +FD++ E+D V+W  MI   
Sbjct: 855  GRLIHHIVYKFGLDLDHFVCA-ALVDMYGKC-REIEDARFLFDKMXERDLVTWTVMIGGY 912

Query: 156  CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
               G  + +L  F  M    V P    +V+V  AC+ L     +   R +     R   +
Sbjct: 913  AECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG---AMHKARTIDDYIQRKKFQ 969

Query: 215  WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
             +  +  A++ M+AK G V+ A+ +F   E+++++SW+ ++++   + +  +A+     M
Sbjct: 970  LDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 1029

Query: 275  ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA-----YALRNDI 314
               GI P+ +++ S+L ACSH  +++ G    +     Y++R D+
Sbjct: 1030 LRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDV 1074



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 12/171 (7%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L + +++H  A  + +  +++V + LV  Y+    L+ A  +FD M VR+ ++W+V++  
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           +   G+        + ++  G+R     P+  T   +  AC     +  G  L + +   
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGAR-----PDNYTLPFVIRACRDLKNLQMG-RLIHHIVYK 864

Query: 640 YGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           +G++   DH+ C  +VD+ G+  ++EDA  L + M  E D    W+ ++G 
Sbjct: 865 FGLD--LDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLV-TWTVMIGG 911


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/842 (31%), Positives = 439/842 (52%), Gaps = 47/842 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L S  ++    +A+  +  M  S   P+ F   + L++   + +   G QIH   
Sbjct: 82  SWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSA 141

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK-DQVSWNSMIATLCRFGKWD 162
           VK G  ++   V  +LV  Y KCG    + +K+   + +  D VSW +M+++L   GKW 
Sbjct: 142 VKLGLEMNRF-VGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWG 200

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A E +  M+ S V P+ FT V +  A S+     GL  G+ +H + +  G E N  +  
Sbjct: 201 EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFL---GLSYGKLLHAHLIMFGAELNLVLKT 257

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           A++ MY+K  R+ DA  +     + D+  W T++S  +QN +  EA+   R M L G+ P
Sbjct: 258 AVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLP 317

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR-R 340
           +  + +S+L A S +  LD G++ H+  +    L D+ ++G+ALVDMY  C  +     +
Sbjct: 318 NNFTYSSLLNASSSILSLDLGEQFHSRVIIVG-LEDDLYIGNALVDMYMKCSHITTNAVK 376

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF  I+   +  W ++I G+ +    E++  LF +M+  AG+ PN+ TMS+++ AC ++ 
Sbjct: 377 VFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQ-AAGVRPNSFTMSAILGACSKTR 434

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +      +HGH IK  +  D  V NAL+D Y+ +G I+ + ++   M +RD++++  +  
Sbjct: 435 SLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAA 494

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G HG AL +L  M N        +   +DE          +L + L     L  +
Sbjct: 495 RLNQKGHHGMALKVLIHMCN--------DGIKMDE---------FSLASFLSAAAGLGTM 537

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             GK++H Y++++       V ++LV +Y+KCG ++ A R F  +   +  +WN +I  +
Sbjct: 538 ETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGF 597

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             +G     L    +M   G     VKP+ +T ++L +ACSH G++  G++ F+ M+ +Y
Sbjct: 598 SWNGLISHALSTFDDMRLAG-----VKPDSITLLSLISACSHGGLLELGLEYFHSMQKEY 652

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            I P  DHY C+VDLLGR G++E+A  +I  M  + D      +LL AC +H NV +GE 
Sbjct: 653 HITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSL-ICKTLLNACNLHGNVALGED 711

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
            A+    L+P   + Y+LL+N+Y +A L D     R+ M+E G+R+ PG  W+E    +H
Sbjct: 712 MARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVH 771

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            F AG+  ++  +++   LE L    R   Y            E E +     H E+LA+
Sbjct: 772 HFSAGEKINE--DEITEKLEFLITEFRNRRY---------QYQENEDKFY---HPEQLAV 817

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG+LN P  + IR+ KN  +C+ CH      +++  REII+RD +RFH FK+G CSC D
Sbjct: 818 AFGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRD 877

Query: 881 YW 882
            +
Sbjct: 878 IF 879



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 286/605 (47%), Gaps = 47/605 (7%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWN 149
           L  G  IH+ ++K G     + + N L+++Y K     + V++   +FD +  +D VSW 
Sbjct: 30  LKEGICIHSPIIKLGLQ-HDLYLTNNLLSLYAK----TFGVHRARHLFDEMPNRDVVSWT 84

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           +++++  +      AL+ F MM+ S   P+ FTL S   +C  L        G Q+H ++
Sbjct: 85  TILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGE---FERGMQIHCSA 141

Query: 210 LRVG-EWNTFIMNALMAMYAKLG--RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
           +++G E N F+  +L+  Y K G   V+  K L    +  D+VSW T++SSL +N K+ E
Sbjct: 142 VKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGE 201

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           A     +M   G+ P+  +   +L A S    L  GK +HA+ +     + N  + +A+V
Sbjct: 202 AFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAEL-NLVLKTAVV 260

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           DMY  CR +    +V +   +  + LW  +I+G+ QN    EA+ +F  M E++GL PN 
Sbjct: 261 DMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDM-ELSGLLPNN 319

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT-IFD 445
            T SS++ A     +    E  H   I +GL  D Y+ NAL+DMY +   I  +   +F 
Sbjct: 320 FTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFR 379

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           ++   + + W ++I G+    +  D+  L  EMQ                     +PNS 
Sbjct: 380 EITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEMQ-----------------AAGVRPNSF 421

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T+  +L  C    +L     +H + I+  +  D+ V +ALVD YA  G ++ A  V   M
Sbjct: 422 TMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTM 481

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
            +R+ IT+  +       G     L++L +M  +G     +K +E +  +  +A +  G 
Sbjct: 482 NLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDG-----IKMDEFSLASFLSAAAGLGT 536

Query: 626 VSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI-NMMPPEFDKAGAWS 683
           +  G  L  Y +K   G +        +V L  + G + DA +   ++  P+   A +W+
Sbjct: 537 METGKQLHCYSVKS--GFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPD---AFSWN 591

Query: 684 SLLGA 688
            L+  
Sbjct: 592 GLISG 596



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 232/484 (47%), Gaps = 38/484 (7%)

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
           + L+ G  +H   +++G + + ++ N L+++YAK   V  A+ LF    +RD+VSW TI+
Sbjct: 28  NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTIL 87

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           SS ++     +A+     M   G  P+  +++S L +C  L   + G +IH  A++  + 
Sbjct: 88  SSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLE 147

Query: 316 IDNSFVGSALVDMY--CNCREVECGRRVFDFISD-KKIALWNAMITGYGQNEYDEEALML 372
           + N FVG++LV+ Y  C C  VE   ++   + D   +  W  M++   +N    EA  +
Sbjct: 148 M-NRFVGTSLVEFYTKCGCCSVE-AWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEI 205

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           ++KM E +G++PN  T   ++ A          + +H H I  G   +  ++ A++DMYS
Sbjct: 206 YVKMIE-SGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYS 264

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           +  R+  +  + +     D   W T+I+G+T   Q  +A+ + R+M+             
Sbjct: 265 KCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDME------------- 311

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
               +    PN+ T  ++L    ++ +L  G++ H+  I   L  D+ +G+ALVDMY KC
Sbjct: 312 ----LSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKC 367

Query: 553 GCLNF-ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
             +   A +VF  +   NV+ W  +I  +      ++  +L   M A G     V+PN  
Sbjct: 368 SHITTNAVKVFREITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAAG-----VRPNSF 421

Query: 612 TFIALFAACSHSGMVSEGMDL---FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           T  A+  ACS +  +   M L     K K D  I  +      +VD     G +++A+ +
Sbjct: 422 TMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVAN----ALVDTYAGVGMIDEAWSV 477

Query: 669 INMM 672
           I  M
Sbjct: 478 IGTM 481



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 35/320 (10%)

Query: 388 TMSSVVPACVRSEAFPD----KEGI--HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           ++S     C+R  +F +    KEGI  H   IKLGL  D Y+ N L+ +Y++   +  ++
Sbjct: 10  SLSRFQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRAR 69

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD+M  RD VSW T+++ +T    H DAL L   M    E                  
Sbjct: 70  HLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGE-----------------Y 112

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF-ARR 560
           PN  TL + L  C AL    +G +IH  A++  L  +  VG++LV+ Y KCGC +  A +
Sbjct: 113 PNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWK 172

Query: 561 VFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +  L+    +V++W  ++ +   +G+  E  E+   M+  G     V PNE TF+ L  A
Sbjct: 173 LLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESG-----VYPNEFTFVKLLGA 227

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
            S    +S G  L +     +G E +      VVD+  +  ++ DA ++ N + PE+D  
Sbjct: 228 VSSFLGLSYG-KLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSN-LTPEYD-V 284

Query: 680 GAWSSLLGACRIHQNVEIGE 699
             W++L+      QN+++ E
Sbjct: 285 YLWTTLISG--FTQNLQVRE 302


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/765 (32%), Positives = 438/765 (57%), Gaps = 57/765 (7%)

Query: 60  EAILSYIEMTRS--DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           EA+L Y  M  S   ++ D++ + +VLKA A  ++L +GK +HAH ++     S + V N
Sbjct: 53  EALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRI-VYN 111

Query: 118 TLVNMYGKCGSDMWD------------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
           +L+NMY  C S   D            V KVFD + ++  V+WN++IA   R  ++  A+
Sbjct: 112 SLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAV 171

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW--NTFIMNA 222
           + F MM+   ++PS  + V+V  A S+L      +    VHG  +++G E+  + +++++
Sbjct: 172 KQFSMMMKIGIKPSPVSFVNVFPAFSSLG---DFKNANVVHGMLVKLGSEYVNDLYVVSS 228

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
            + MYA+LG ++ AK +F +  +R+   WNT++S+  QN+  LE + +F + +       
Sbjct: 229 AIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAI 288

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V++ S + A SHL+  +  +++HA+ ++N + +    V +AL+ MY  C  ++   ++
Sbjct: 289 DEVTLLSAISAASHLQKFELAEQLHAFVIKN-VAVTQVCVMNALIAMYSRCNSIDTSFKI 347

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + +K +  WN MI+ + QN  ++EALMLF +M++   L  ++ T+++++ A      
Sbjct: 348 FDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK-QDLMVDSVTVTALLSAASDLRN 406

Query: 402 FPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFDDM--EVRDTVSWN 456
               +  HG+ ++ G+   G D Y    L+DMY++ G IE ++ +F+      RD  +WN
Sbjct: 407 PDIGKQTHGYLLRNGIQFEGMDSY----LIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           +M++GYT  G    A ++LR+M              LD+ V+   PN +TL ++LP C  
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQM--------------LDQKVM---PNVVTLASILPACNP 505

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
              +  GK++H ++IRN L  +V V +AL+DMY+K G +  A  VF     ++++T++ +
Sbjct: 506 SGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTM 565

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I+ YG HG G+  L +   M   G     ++P+ VT +A+ +ACS++G+V EG+ +F  M
Sbjct: 566 ILGYGQHGMGESALFMFHRMQKSG-----IQPDAVTLVAVLSACSYAGLVDEGLQIFESM 620

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           +  Y I+PS +H+ CV D+LGRAG+V+ AY+ +  +  + +    W SLL ACRIH+  E
Sbjct: 621 RTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFE 680

Query: 697 IGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +G++ A+ L  +E       ++VLLSNIY+  + W+    VRK+M+E G++KE G SWIE
Sbjct: 681 LGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIE 740

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
               ++ F + D  H QS+Q++  LE L   M+  GY P ++  L
Sbjct: 741 IAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRPLSTSYL 785



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 254/497 (51%), Gaps = 35/497 (7%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   +W   +    R+ ++ EA+  +  M +  I+P   +F  V  A + + D     
Sbjct: 147 RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNAN 206

Query: 98  QIHAHVVKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            +H  +VK G   ++ + V ++ + MY + G  +    KVFD   E++   WN+MI+   
Sbjct: 207 VVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC-LEFAKKVFDNCLERNTEVWNTMISA-- 263

Query: 157 RFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
            F + + +LE  ++   +   E ++   V++  A S  S      L  Q+H   ++ V  
Sbjct: 264 -FVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAV 322

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
               +MNAL+AMY++   +D +  +F +  ++D+VSWNT++S+  QN    EA+M   +M
Sbjct: 323 TQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM 382

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + +  D V++ ++L A S L   D GK+ H Y LRN I  +   + S L+DMY     
Sbjct: 383 KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG--MDSYLIDMYAKSGL 440

Query: 335 VECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           +E  + VF+  F  ++  A WN+M++GY QN   ++A ++  +M +   + PN  T++S+
Sbjct: 441 IEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLD-QKVMPNVVTLASI 499

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +PAC  S      + +HG +I+  L ++ +V  AL+DMYS+ G I  ++ +F     +  
Sbjct: 500 LPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSI 559

Query: 453 VSWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           V+++TMI GY   GQHG    AL +   MQ       ++ +          +P+++TL+ 
Sbjct: 560 VTYSTMILGY---GQHGMGESALFMFHRMQ-------KSGI----------QPDAVTLVA 599

Query: 510 VLPGCGALSALAKGKEI 526
           VL  C     + +G +I
Sbjct: 600 VLSACSYAGLVDEGLQI 616



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 227/480 (47%), Gaps = 52/480 (10%)

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIAS 288
           G++  A+ LF +      V WNTI+  L  N+   EA++F   M      +K D  + +S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV------------- 335
           VL AC+    L  GK +HA+ LR  ++  +  V ++L++MY  C                
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRC-LMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRC 136

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  R+VFD +  + +  WN +I  Y + E   EA+  F  M ++ G+ P+  +  +V PA
Sbjct: 137 DLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKI-GIKPSPVSFVNVFPA 195

Query: 396 CVRSEAFPDKEGIHGHAIKLG--LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                 F +   +HG  +KLG     D YV ++ + MY+ +G +E +K +FD+   R+T 
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 255

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
            WNTMI+ +       + + L    Q +E E        +DE         +TL++ +  
Sbjct: 256 VWNTMISAFVQNNFSLEGIQLF--FQAVESEDAA-----IDE---------VTLLSAISA 299

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L      +++HA+ I+N+  T V V +AL+ MY++C  ++ + ++FD MP ++V++W
Sbjct: 300 ASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSW 359

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----HSGMVSE 628
           N +I A+  +G   E L L   M     +  ++  + VT  AL +A S       G  + 
Sbjct: 360 NTMISAFVQNGLNDEALMLFYEM-----KKQDLMVDSVTVTALLSAASDLRNPDIGKQTH 414

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G    Y +++    E   D Y  ++D+  ++G +E A  +             W+S++  
Sbjct: 415 G----YLLRNGIQFE-GMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSG 467



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 48/379 (12%)

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATT 388
           C   ++   R++FD +      LWN +I G   N + +EAL+ +  M+  +  +  ++ T
Sbjct: 15  CQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYT 74

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR-------------MG 435
            SSV+ AC  +      + +H H ++  +   R V N+L++MYS                
Sbjct: 75  YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYS 134

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
           R ++ + +FD M  R  V+WNT+I  Y    ++ +A+     M                 
Sbjct: 135 RCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMK--------------- 179

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMYAKCG 553
             +  KP+ ++ + V P   +L        +H   ++  +    D+ V S+ + MYA+ G
Sbjct: 180 --IGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELG 237

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           CL FA++VFD    RN   WN +I A+  +    E ++L    V       +   +EVT 
Sbjct: 238 CLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAV----ESEDAAIDEVTL 293

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL----GRAGKVEDAYQLI 669
           ++  +A SH         L       + I+       CV++ L     R   ++ ++++ 
Sbjct: 294 LSAISAASHLQKFELAEQL-----HAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIF 348

Query: 670 NMMPPEFDKAGAWSSLLGA 688
           + MP +     +W++++ A
Sbjct: 349 DNMPEK--DVVSWNTMISA 365


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 26/595 (4%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           S++ AC+  + L   + IHA+ L    L  ++F+ ++L+ MYC C  V   R VFD +  
Sbjct: 65  SIIAACAQFKNLAGARAIHAH-LSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPS 123

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
           + +  W  +I GY QN    EA+ L   M   A   PN  T +S++ A          E 
Sbjct: 124 RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR-ARFRPNGFTFTSLLKATGACGGCSIGEQ 182

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H  A+K     D YV +AL+DMY+R  +++++  +FD +  ++ VSWN +I G+     
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 242

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
               LM   EMQ       RN                 T  ++      + AL +G+ +H
Sbjct: 243 GETTLMKFAEMQ-------RNGF----------GATHFTYSSMFSAFARIGALEQGRWVH 285

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           A+ I++       VG+ ++ MYAK G +  AR+VFD M  R+++TWN ++ A   +G G+
Sbjct: 286 AHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGK 345

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E +   + +     R   ++ N++TF+++  ACSH G+V EG   F  MKD Y ++P  D
Sbjct: 346 EAVAHFEEI-----RKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEID 399

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY   VDLLGRAG +++A   +  MP E   A  W +LLGACR+H+N ++G+ AA ++F 
Sbjct: 400 HYVSFVDLLGRAGLLKEALIFVFKMPME-PTAAVWGALLGACRMHKNAKMGQYAADHVFE 458

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L+PD     VLL NIY+S   W+ A  VRK MK  GV+KEP CSW++  + +H F+A D 
Sbjct: 459 LDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDD 518

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H +S  ++   E ++ R++K GYVP+T+ VL ++NE+E+ET L  HSEK+A+AF ++N 
Sbjct: 519 THPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINM 578

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           P G +IR+ KN+R+C DCH A K++SK+  REI++RD  RFHHF  G+CSCGDYW
Sbjct: 579 PAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 186/413 (45%), Gaps = 22/413 (5%)

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
           + P+     S+  AC+      G R        S   G+   F++N+L+ MY K G V D
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGD--AFLLNSLIHMYCKCGAVSD 113

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F     RD+VSW  +++  +QN    EA+  L  M     +P+G +  S+L A   
Sbjct: 114 ARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGA 173

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
                 G+++HA A++ +   ++ +VGSAL+DMY  C +++    VFD +  K    WNA
Sbjct: 174 CGGCSIGEQMHALAVKYN-WDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNA 232

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +I G+ +    E  LM F +M+   G      T SS+  A  R  A      +H H IK 
Sbjct: 233 LIAGFARKADGETTLMKFAEMQR-NGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS 291

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G     +V N ++ MY++ G +  ++ +FD M+ RD V+WNTM+T     G   +A+   
Sbjct: 292 GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHF 351

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            E++    + N+                 IT ++VL  C     + +GK          +
Sbjct: 352 EEIRKCGIQLNQ-----------------ITFLSVLTACSHGGLVKEGKHYFDMMKDYNV 394

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
             ++    + VD+  + G L  A      MP+      W  ++ A  MH   +
Sbjct: 395 QPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 447



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 6/262 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++    EAI    +M R+  +P+ F F ++LKA       S+G+Q+HA  
Sbjct: 128 SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALA 187

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VKY +    V V + L++MY +C   M     VFDR+  K++VSWN++IA   R    + 
Sbjct: 188 VKYNWD-EDVYVGSALLDMYARC-EQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNA 222
            L  F  M  +    + FT  S+    S  +R   L  GR VH + ++ G+  T F+ N 
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSM---FSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MYAK G + DA+ +F   + RDLV+WNT++++L+Q     EAV    ++   GI+ +
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362

Query: 283 GVSIASVLPACSHLEMLDTGKE 304
            ++  SVL ACSH  ++  GK 
Sbjct: 363 QITFLSVLTACSHGGLVKEGKH 384



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 208/458 (45%), Gaps = 40/458 (8%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVL 84
           P T+A    +P          I    S A S   RE  L    +   ++ P    + +++
Sbjct: 22  PYTSAAHRAVP----------ISFPSSPASSTGLRELDL----LHAGELAPTPRLYHSII 67

Query: 85  KAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKD 144
            A A  ++L+  + IHAH+ +         + N+L++MY KCG+ + D   VFD++  +D
Sbjct: 68  AACAQFKNLAGARAIHAHLSRSCLA-GDAFLLNSLIHMYCKCGA-VSDARHVFDKMPSRD 125

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
            VSW  +IA   +      A+     ML +   P+ FT  S+  A        G  +G Q
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG---GCSIGEQ 182

Query: 205 VHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           +H  +++   W  + ++ +AL+ MYA+  ++D A  +F     ++ VSWN +++  ++  
Sbjct: 183 MHALAVKY-NWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKA 241

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
                +M   +M   G      + +S+  A + +  L+ G+ +HA+ +++   +  +FVG
Sbjct: 242 DGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL-TAFVG 300

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           + ++ MY     +   R+VFD +  + +  WN M+T   Q    +EA+  F ++ +  G+
Sbjct: 301 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKC-GI 359

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN------ALMDMYSRMGR 436
             N  T  SV+ AC  S     KEG H       + +D  VQ       + +D+  R G 
Sbjct: 360 QLNQITFLSVLTAC--SHGGLVKEGKH----YFDMMKDYNVQPEIDHYVSFVDLLGRAGL 413

Query: 437 IEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALM 473
           ++ +      M +  T + W  ++     C  H +A M
Sbjct: 414 LKEALIFVFKMPMEPTAAVWGALLGA---CRMHKNAKM 448



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 22/248 (8%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P      S++ AC + +       IH H  +  L  D ++ N+L+ MY + G +  ++
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  RD VSW  +I GY       +A+ LL +M                    R +
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRA-----------------RFR 158

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN  T  ++L   GA    + G+++HA A++     DV VGSAL+DMYA+C  ++ A  V
Sbjct: 159 PNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMV 218

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FD +  +N ++WN +I  +    +G+  L       AE  R G       T+ ++F+A +
Sbjct: 219 FDRLVSKNEVSWNALIAGFARKADGETTLMKF----AEMQRNG-FGATHFTYSSMFSAFA 273

Query: 622 HSGMVSEG 629
             G + +G
Sbjct: 274 RIGALEQG 281


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/801 (32%), Positives = 437/801 (54%), Gaps = 61/801 (7%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR-FGKW--------- 161
           +V   N ++N Y K GS + D  ++FDR+  +D  SWN++++   R  G W         
Sbjct: 86  NVITHNIMMNGYAKQGS-LSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCR 144

Query: 162 DLALEAFRMMLYSNV--EPSSFT-LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           +LA +   +    +   +P   T LV + + C  +      RL  Q+   ++       F
Sbjct: 145 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFAS--RLFSQIERPTI-------F 195

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
             N+++A YAKL  +D A   F+   +RD+VSWN ++++LSQ+ +  EA+  + +M  +G
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++ D  +  S L AC+ L  L  GK++HA  +R+   ID  +V SAL+++Y  C   +  
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID-PYVASALIELYAKCGSFKEA 314

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME-EVAGLWPNATTMSSVVPACV 397
           +RVF+ + D+    W  +I G  Q E   +++ LF +M  E+  +  +   +++++  C 
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI--DQFALATLISGCF 372

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                     +H   +K G  R   V N+L+ +Y++ G ++ ++ +F  M  RD VSW +
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 432

Query: 458 MITGYTICG------QHGDAL----------MLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           MIT Y+  G      +  D +          ML   +Q+  EE     +Y    +     
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGL-KMYSAMLSQKDVT 491

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+ +T +T+  GC  + A   G +I  + ++  L  +V V +A + MY+KCG ++ A+++
Sbjct: 492 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           FDL+  ++V++WN +I  Y  HG G++  +   +M+++G+     KP+ ++++A+ + CS
Sbjct: 552 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA-----KPDYISYVAVLSGCS 606

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           HSG+V EG   F  M   +GI P  +H++C+VDLLGRAG + +A  LI+ MP +   A  
Sbjct: 607 HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK-PTAEV 665

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LL AC+IH N E+ E+AA+++F L+   +  Y+LL+ IYS A   D +  VRK M++
Sbjct: 666 WGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 725

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            G++K PG SW+E  +++H F A D SH Q   +   ++ L E++   GYV         
Sbjct: 726 KGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV--------- 776

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
               E       HSEKLA+AFGI++ P    I + KNLR+C DCH   K IS +  RE +
Sbjct: 777 --RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFV 834

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFHHFK+G+CSCGDYW
Sbjct: 835 IRDGVRFHHFKSGSCSCGDYW 855



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 224/470 (47%), Gaps = 61/470 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + ++S + REA+   +EM R  ++ D+  + + L A A +  L  GKQ+HA V
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 286

Query: 104 VKYGYGLSSVT--VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++    L  +   VA+ L+ +Y KCGS   +  +VF+ + +++ VSW  +I    ++  +
Sbjct: 287 IR---SLPQIDPYVASALIELYAKCGS-FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 342

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             ++E F  M    +    F L ++   C N   R  L LGRQ+H   L+ G     ++ 
Sbjct: 343 SKSVELFNQMRAELMAIDQFALATLISGCFN---RMDLCLGRQLHSLCLKSGHNRAIVVS 399

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--- 277
           N+L+++YAK G + +A+ +F S  +RD+VSW +++++ SQ    ++A  F   MA R   
Sbjct: 400 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAI 459

Query: 278 -----------------GIK------------PDGVSIASVLPACSHLEMLDTGKEIHAY 308
                            G+K            PD V+  ++   C+ +     G +I  +
Sbjct: 460 TWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGH 519

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            ++  ++++ S V +A + MY  C  +   +++FD ++ K +  WNAMITGY Q+   ++
Sbjct: 520 TVKAGLILNVS-VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 578

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGRDR 421
           A   F  M    G  P+  +  +V+  C  S     +EG          H I  GL    
Sbjct: 579 AAKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLV--QEGKLYFDMMTRVHGISPGLEH-- 633

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
              + ++D+  R G +  +K + D M ++ T   W  +++    C  HG+
Sbjct: 634 --FSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA---CKIHGN 678



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 259/589 (43%), Gaps = 95/589 (16%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
           TL+   L+C  LS  D  RL R        + E N    N +M  YAK G + DA+ LF 
Sbjct: 60  TLLHAYLSCGALS--DARRLLRA------DIKEPNVITHNIMMNGYAKQGSLSDAEELFD 111

Query: 242 SFEDRDLVSWNTIVSSLSQ--NDKFLEAVMFLRQMA--LRGI--------KPD-GVSIAS 288
               RD+ SWNT++S  S+          +  R++A  L G+         PD   ++  
Sbjct: 112 RMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 171

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +   C +   +D    + +   R  I   NS +       Y     ++     F+ ++++
Sbjct: 172 MFVRCGY---VDFASRLFSQIERPTIFCRNSMLAG-----YAKLYGIDHAIEYFEDMAER 223

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WN MI    Q+    EAL L ++M    G+  ++TT +S + AC R  +    + +
Sbjct: 224 DVVSWNMMIAALSQSGRVREALGLVVEMHR-KGVRLDSTTYTSSLTACARLFSLGWGKQL 282

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H   I+     D YV +AL+++Y++ G  + +K +F+ ++ R++VSW  +I G       
Sbjct: 283 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 342

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
             ++ L  +M        R  +  +D+           L T++ GC     L  G+++H+
Sbjct: 343 SKSVELFNQM--------RAELMAIDQ---------FALATLISGCFNRMDLCLGRQLHS 385

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLN-------------------------------F 557
             +++     +VV ++L+ +YAKCG L                                 
Sbjct: 386 LCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIK 445

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR  FD M  RN ITWN ++ AY  HG  ++ L++   M+++     +V P+ VT++ LF
Sbjct: 446 AREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ----KDVTPDWVTYVTLF 501

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             C+  G    G  +  + +K    +  S  + A  + +  + G++ +A +L +++  + 
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAA--ITMYSKCGRISEAQKLFDLLNGK- 558

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL-----EPDVASHYVLLS 720
               +W++++     H    +G+ AA+    +     +PD  S+  +LS
Sbjct: 559 -DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGAKPDYISYVAVLS 603



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 42/369 (11%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q R   SW   +    +   F +++  + +M    +  D FA   ++       DL LG+
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+H+  +K G+   ++ V+N+L+++Y KCG D+ +   VF  ++E+D VSW SMI    +
Sbjct: 382 QLHSLCLKSGHN-RAIVVSNSLISLYAKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQ 439

Query: 158 FGK------------------WDLALEAF--------------RMMLYSNVEPSSFTLVS 185
            G                   W+  L A+               M+   +V P   T V+
Sbjct: 440 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 499

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           +   C+++      +LG Q+ G++++ G   N  + NA + MY+K GR+ +A+ LF    
Sbjct: 500 LFRGCADIGAN---KLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 556

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            +D+VSWN +++  SQ+    +A      M  +G KPD +S  +VL  CSH  ++  GK 
Sbjct: 557 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKL 616

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA-LWNAMITG---Y 360
                 R   +       S +VD+      +   + + D +  K  A +W A+++    +
Sbjct: 617 YFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 676

Query: 361 GQNEYDEEA 369
           G +E  E A
Sbjct: 677 GNDELAELA 685



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 140/343 (40%), Gaps = 57/343 (16%)

Query: 382 LWPNATT--MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           L P+A T  ++  + +C    A      +HG  + +GL    ++QN L+  Y   G +  
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73

Query: 440 SKTIFD-DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           ++ +   D++  + ++ N M+ GY   G   DA  L   M   +       + D      
Sbjct: 74  ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTS---- 129

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           RP  + ++       CGAL       ++     +     D  V +ALVDM+ +CG ++FA
Sbjct: 130 RPAGSWMS-------CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 182

Query: 559 RRV-------------------------------FDLMPVRNVITWNVIIMAYGMHGEGQ 587
            R+                               F+ M  R+V++WN++I A    G  +
Sbjct: 183 SRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR 242

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E L L+  M  +G     V+ +  T+ +   AC+    +  G  L  K+       P  D
Sbjct: 243 EALGLVVEMHRKG-----VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQID 294

Query: 648 HY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            Y  + +++L  + G  ++A ++ N +      + +W+ L+G 
Sbjct: 295 PYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGG 335



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 20/256 (7%)

Query: 499 RPKPNSIT--LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
           R  P+++T  L   L  CG+  ALA  + +H   +   LA+ V + + L+  Y  CG L+
Sbjct: 13  RLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS 72

Query: 557 FARRVFDL-MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
            ARR+    +   NVIT N+++  Y   G   +  EL   M            ++ +  A
Sbjct: 73  DARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPA 132

Query: 616 -LFAACSHSG---MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
             + +C   G   +  + + LF+K  D +G    PD    +VD+  R G V+ A +L + 
Sbjct: 133 GSWMSCGALGCRELAPQLLGLFWKF-DFWG---DPDVETALVDMFVRCGYVDFASRLFSQ 188

Query: 672 M--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
           +  P  F +    +       I   +E  E  A      E DV S  ++++ +  S ++ 
Sbjct: 189 IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA------ERDVVSWNMMIAALSQSGRV- 241

Query: 730 DKAMDVRKKMKEMGVR 745
            +A+ +  +M   GVR
Sbjct: 242 REALGLVVEMHRKGVR 257


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/717 (34%), Positives = 394/717 (54%), Gaps = 46/717 (6%)

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           F + S+  AC+ L     L  GR++H + +  G   +  +  AL+ MYAK G +DDAK +
Sbjct: 11  FIVTSLVAACTKLQ---ALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRV 67

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+  E +DL +W++I+S+ ++  +   AV+  R+M   G++P+ V+ A  L  C+ +  L
Sbjct: 68  FEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGL 127

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+ IH   L + +  D+    S L++MY  C E+   R+VF+ +  + +  + AMI+ 
Sbjct: 128 ADGRAIHQRILASKVPQDDVLQDS-LLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISA 186

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q     EAL LF +M +V  + PNA T ++++ A            +H H    G   
Sbjct: 187 YVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDT 246

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           +  VQNAL+ MY + G    ++ +FD M  R+ +SW +MI  Y   G   +AL L + M 
Sbjct: 247 NVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD 306

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                                +P+ ++  + L  C  L AL +G+EIH   +   LA+  
Sbjct: 307 --------------------VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ 346

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           +  ++L+ MYA+CG L+ ARRVF+ M  R+  + N +I A+  HG  ++ L + + M  E
Sbjct: 347 M-ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQE 405

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     +  + +TF+++  ACSH+ +V++  D F  +  D+G+ P  +HY C+VD+LGR+
Sbjct: 406 G-----IPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRS 460

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G++ DA +L+  MP + D A AW +LL  C+ H ++  GE AA+ +F L P     YV L
Sbjct: 461 GRLGDAEELVETMPYQTD-AVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFL 519

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS------- 772
           SN+Y++A+ +D A  VRK+M+E GV      S+IE  +E+H F +G    QQ        
Sbjct: 520 SNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTM 579

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVL----HNVNEEEKETLLCGHSEKLAIAFGIL--- 825
           E++   L  L E M++ GYVPDT  V        +EEEK+  LC HSE+LAIA+G++   
Sbjct: 580 ERVRSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAK 639

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +      +RV  + RVC+DCH A K +S I  + I +RD  RFHHF+ G CSCGD+W
Sbjct: 640 DPDDSRPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 204/403 (50%), Gaps = 36/403 (8%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMY 329
           M  RGI  D   + S++ AC+ L+ L+ G+ +H +      R DI ++     +AL+ MY
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLE-----TALLQMY 55

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  ++  +RVF+ +  K +  W+++I+ Y +    E A++L+ +M    G+ PN  T 
Sbjct: 56  AKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMI-AEGVEPNVVTF 114

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +  +  C       D   IH   +   + +D  +Q++L++MY +   +  ++ +F+ M+ 
Sbjct: 115 ACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKA 174

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+  S+  MI+ Y   G+H +AL L   M  +E                  +PN+ T  T
Sbjct: 175 RNVRSYTAMISAYVQAGEHAEALELFSRMSKVEA----------------IEPNAYTFAT 218

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +L     L  L KG+++H +       T+VVV +ALV MY KCG    AR+VFD M  RN
Sbjct: 219 ILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 278

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           VI+W  +I AY  HG  QE L L K M        +V+P+ V+F +   AC+  G + EG
Sbjct: 279 VISWTSMIAAYAQHGNPQEALNLFKRM--------DVEPSGVSFSSALNACALLGALDEG 330

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
            ++ +++ + +    SP     ++ +  R G ++DA ++ N M
Sbjct: 331 REIHHRVVEAH--LASPQMETSLLSMYARCGSLDDARRVFNRM 371



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 261/523 (49%), Gaps = 34/523 (6%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M    I  D F   +++ A   +Q L  G+++H H++  G+  + + +   L+ MY KCG
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGF-RTDIPLETALLQMYAKCG 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
           S + D  +VF+ +  KD  +W+S+I+   R G+ ++A+  +R M+   VEP+  T     
Sbjct: 60  S-LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACAL 118

Query: 188 LACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             C++++   GL  GR +H   L  +V + +  + ++L+ MY K   + +A+ +F+  + 
Sbjct: 119 GGCASVA---GLADGRAIHQRILASKVPQ-DDVLQDSLLNMYLKCDEMVEARKVFEGMKA 174

Query: 246 RDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           R++ S+  ++S+  Q  +  EA+ +F R   +  I+P+  + A++L A   L  L+ G++
Sbjct: 175 RNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRK 234

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +H + L +     N  V +ALV MY  C      R+VFD ++ + +  W +MI  Y Q+ 
Sbjct: 235 VHRH-LASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHG 293

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             +EAL LF +M+    + P+  + SS + AC    A  +   IH   ++  L   + ++
Sbjct: 294 NPQEALNLFKRMD----VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ-ME 348

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
            +L+ MY+R G ++ ++ +F+ M+ RD  S N MI  +T   QHG     LR  + ME+E
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFT---QHGRKKQALRIYRRMEQE 405

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS- 543
                             + IT ++VL  C   S +A  ++     + +     +V    
Sbjct: 406 G--------------IPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYL 451

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            +VD+  + G L  A  + + MP + + + W  ++     HG+
Sbjct: 452 CMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGD 494



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 225/432 (52%), Gaps = 20/432 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + + AR+ +   A++ Y  M    ++P+   F   L   A +  L+ G+ IH  +
Sbjct: 78  AWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRI 137

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +        V + ++L+NMY KC  +M +  KVF+ +  ++  S+ +MI+   + G+   
Sbjct: 138 LASKVPQDDV-LQDSLLNMYLKC-DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195

Query: 164 ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           ALE F RM     +EP+++T  ++  A   L     L  GR+VH +    G + N  + N
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLG---NLEKGRKVHRHLASRGFDTNVVVQN 252

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY K G   +A+ +F S   R+++SW +++++ +Q+    EA+   ++M    ++P
Sbjct: 253 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEP 309

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            GVS +S L AC+ L  LD G+EIH   +  +  + +  + ++L+ MY  C  ++  RRV
Sbjct: 310 SGVSFSSALNACALLGALDEGREIHHRVV--EAHLASPQMETSLLSMYARCGSLDDARRV 367

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +  +     NAMI  + Q+   ++AL ++ +ME+  G+  +  T  SV+ AC  +  
Sbjct: 368 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQ-EGIPADGITFVSVLVACSHTSL 426

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNAL--MDMYSRMGRIEISKTIFDDMEVR-DTVSWNTM 458
             D       ++ +  G    V++ L  +D+  R GR+  ++ + + M  + D V+W T+
Sbjct: 427 VADCRDFF-QSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTL 485

Query: 459 ITGYTICGQHGD 470
           ++G   C +HGD
Sbjct: 486 LSG---CKRHGD 494


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/610 (39%), Positives = 342/610 (56%), Gaps = 53/610 (8%)

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           +IHA  LR   L  +  +   L   Y +   +     +F    +  + LW  +I  +   
Sbjct: 41  QIHAALLRRG-LHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHF 99

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           +    AL  + +M     + PNA T+SS++ AC    A      +H HAIK GL    YV
Sbjct: 100 DLFHHALSYYSQML-THPIQPNAFTLSSLLKACTLHPA----RAVHSHAIKFGLSSHLYV 154

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVR-------------------------------DT 452
              L+D Y+R G +  ++ +FD M  R                               D 
Sbjct: 155 STGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDV 214

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           V WN MI GY   G   +AL+  R+M  M        V          +PN IT++ VL 
Sbjct: 215 VCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKV----------RPNEITVVAVLS 264

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            CG + AL  GK +H+Y   N +  +V VG+ALVDMY KCG L  AR+VFD+M  ++V+ 
Sbjct: 265 SCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVA 324

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN +IM YG+HG   E L+L   M   G     VKP+++TF+A+  AC+H+G+VS+G ++
Sbjct: 325 WNSMIMGYGIHGFSDEALQLFHEMCCIG-----VKPSDITFVAVLTACAHAGLVSKGWEV 379

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  MKD YG+EP  +HY C+V+LLGRAG++++AY L+  M  E D    W +LL ACRIH
Sbjct: 380 FDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPV-LWGTLLWACRIH 438

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            NV +GE  A+ L       +  YVLLSN+Y++A+ W     VR  MK  GV KEPGCS 
Sbjct: 439 SNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSS 498

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IE  + +H+F+AGD  H +S+ ++  LE ++  +++  Y P T  VLH++ E+EKE  L 
Sbjct: 499 IEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLE 558

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AFG+++T PG  I++ KNLRVC DCH   K +SKI  R+II+RD  RFHHF+
Sbjct: 559 VHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFE 618

Query: 873 NGTCSCGDYW 882
           NG+CSC DYW
Sbjct: 619 NGSCSCRDYW 628



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 193/405 (47%), Gaps = 56/405 (13%)

Query: 98  QIHAHVVKYGYGLSSVTVAN-TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           QIHA +++ G  L    + N  L   Y   G     V  +F R    +   W  +I    
Sbjct: 41  QIHAALLRRG--LHHHPILNFKLQRSYASLGHLHHSV-TLFHRTPNPNVFLWTHIINAHA 97

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--- 213
            F  +  AL  +  ML   ++P++FTL S+  AC+       L   R VH ++++ G   
Sbjct: 98  HFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT-------LHPARAVHSHAIKFGLSS 150

Query: 214 -----------------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
                                        E +     A++  YAK G + +A+ LF+   
Sbjct: 151 HLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMG 210

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-------IKPDGVSIASVLPACSHLE 297
            +D+V WN ++   +Q+    EA++F R+M +         ++P+ +++ +VL +C  + 
Sbjct: 211 MKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVG 270

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            L+ GK +H+Y   N I + N  VG+ALVDMYC C  +E  R+VFD +  K +  WN+MI
Sbjct: 271 ALECGKWVHSYVENNGIKV-NVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMI 329

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            GYG + + +EAL LF +M  + G+ P+  T  +V+ AC  +        +   ++K G 
Sbjct: 330 MGYGIHGFSDEALQLFHEMCCI-GVKPSDITFVAVLTACAHAGLVSKGWEVFD-SMKDGY 387

Query: 418 GRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
           G +  V++   ++++  R GR++ +  +   MEV  D V W T++
Sbjct: 388 GMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 54/303 (17%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + + A  + F  A+  Y +M    IQP+ F   ++LKA      L   + +H+H +
Sbjct: 89  WTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAI 144

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE---------------------- 142
           K+G   S + V+  LV+ Y + G D+    K+FD + E                      
Sbjct: 145 KFGLS-SHLYVSTGLVDAYAR-GGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEA 202

Query: 143 ---------KDQVSWNSMIATLCRFGKWDLALEAFR-------MMLYSNVEPSSFTLVSV 186
                    KD V WN MI    + G  + AL  FR             V P+  T+V+V
Sbjct: 203 RVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAV 262

Query: 187 ALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
             +C  +     L  G+ VH     N ++V   N  +  AL+ MY K G ++DA+ +F  
Sbjct: 263 LSSCGQVG---ALECGKWVHSYVENNGIKV---NVRVGTALVDMYCKCGSLEDARKVFDV 316

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            E +D+V+WN+++     +    EA+    +M   G+KP  ++  +VL AC+H  ++  G
Sbjct: 317 MEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKG 376

Query: 303 KEI 305
            E+
Sbjct: 377 WEV 379



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 26/210 (12%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           FR+ ++         ++P+     AVL +   +  L  GK +H++V   G  + +V V  
Sbjct: 237 FRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKV-NVRVGT 295

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            LV+MY KCGS + D  KVFD +  KD V+WNSMI      G  D AL+ F  M    V+
Sbjct: 296 ALVDMYCKCGS-LEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVK 354

Query: 178 PSSFTLVSVALACSNL-----------SRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
           PS  T V+V  AC++            S +DG       +G   +V  +   +      +
Sbjct: 355 PSDITFVAVLTACAHAGLVSKGWEVFDSMKDG-------YGMEPKVEHYGCMV-----NL 402

Query: 227 YAKLGRVDDAKTLFKSFE-DRDLVSWNTIV 255
             + GR+ +A  L +S E + D V W T++
Sbjct: 403 LGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/798 (32%), Positives = 429/798 (53%), Gaps = 44/798 (5%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  G++IH  V++ GYG   + ++N L++MY +  S   D   + DR+  ++ +SWN++I
Sbjct: 28  LEQGRKIHRRVIESGYG-DHLFLSNHLLHMYARLESSR-DAELLLDRMPRRNALSWNAVI 85

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
               + G +  +L  F+ ML     P +   +S+  A   +        G  V   + + 
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE------GEIVQEFAEKS 139

Query: 213 GEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G   +F++  AL+ MY + GR+D AK  F   ++R +VSWN +++  S+ D+  +++   
Sbjct: 140 GFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVF 199

Query: 272 RQMALRGIKPDGVSIASVLPACSHL--EMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           R+M L+GI P+ V+I  +  A + +  ++   G  IH+ ++ +  LI  + V +++++++
Sbjct: 200 REMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSI-DSGLISVTTVANSIINLF 258

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                +     +F+ +  + +  WN MI+ + QN +   AL L+ +M     + P+  T 
Sbjct: 259 GRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT----IRPDGVTF 314

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
            +V+ AC   +     E IH      G   D  V  AL+ MY R GR++ +  +F  ++ 
Sbjct: 315 VNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQH 374

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
              ++ N +I  +   G+   +L+  R+M                   L  +P+  TL+ 
Sbjct: 375 PGVITLNAIIAAHAQFGRADGSLLHFRQMLQ-----------------LGIRPSKFTLVA 417

Query: 510 VLPGCGALSALAKG-KEIHAYAIR---NMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           VL  C    A A   +++H +      +    D++V +ALV+MYAKCG L+ AR +FD  
Sbjct: 418 VLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAA 477

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  NV TWN I+  Y  HG     + LL  M   G     + P+ ++F A  +A SH+  
Sbjct: 478 PQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAG-----ISPDPISFTAALSASSHARQ 532

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V +G  +FY +  DYG+ PS +HY  VVDLLGRAG +E+A   +  M    D A    +L
Sbjct: 533 VEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAW-MAL 591

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACRIH++ +    AA+ +  ++P   + Y +LSN+YS+A  WD+A ++R++M E G R
Sbjct: 592 LGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGAR 651

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR-KEGYVPDTSCVLHNVNE 804
           KEPG SWIE  + +H+F   D SH ++ +++  L+ L   ++ +E YVPD   VLH+V +
Sbjct: 652 KEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVED 711

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           E +E LL  HSEKLA+ FG++ T  G+ I + KNLR+C DCH   K  SK   REI++RD
Sbjct: 712 EHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRD 771

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHF  G CSC D W
Sbjct: 772 CYRFHHFNGGACSCSDCW 789



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 256/531 (48%), Gaps = 54/531 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +R+ A++  F  ++L +  M +    PD   F +++KA   IQ+   G+ +    
Sbjct: 80  SWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIVQEFA 136

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+  S V V   L+ MYG+CG  +      FDRI E+  VSWN++I    R  + + 
Sbjct: 137 EKSGFDRSFV-VGTALIGMYGRCGR-LDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQ 194

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           +L  FR ML   + P++ T++ +A A + ++ +     G  +H  S+  G  + T + N+
Sbjct: 195 SLRVFREMLLQGIAPNAVTIICIASAVAGIAAKI-TTCGNLIHSCSIDSGLISVTTVANS 253

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ ++ + G +  A  +F+  + RD+ SWNT++S+ +QN     A+    +M +R   PD
Sbjct: 254 IINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIR---PD 310

Query: 283 GVSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           GV+  +VL AC   + L+ G+ IH    A+   +D++     V +ALV MY  C  ++  
Sbjct: 311 GVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLI-----VATALVSMYRRCGRLDRA 365

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  I    +   NA+I  + Q    + +L+ F +M ++ G+ P+  T+ +V+ AC  
Sbjct: 366 AEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQL-GIRPSKFTLVAVLGACAT 424

Query: 399 SEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           S A           +    G     D  V+NAL++MY++ G ++ ++ IFD     +  +
Sbjct: 425 SGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVST 484

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN ++ GY    QHG A M +R +            Y++    + P P S T        
Sbjct: 485 WNAIMAGYA---QHGYANMAVRLL------------YEMQLAGISPDPISFT-------- 521

Query: 515 GALSALAKGKEIHA-----YAIRN--MLATDVVVGSALVDMYAKCGCLNFA 558
            ALSA +  +++       YAI     L   V    A+VD+  + G L  A
Sbjct: 522 AALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEA 572



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           ++L +G++IH   I +     + + + L+ MYA+      A  + D MP RN ++WN +I
Sbjct: 26  TSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVI 85

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            A    G+    L   + M+ +GS      P+ V F++L  A      + EG ++  +  
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGS-----LPDAVVFLSLIKA---PRTIQEG-EIVQEFA 136

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           +  G + S      ++ + GR G+++ A
Sbjct: 137 EKSGFDRSFVVGTALIGMYGRCGRLDRA 164


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/638 (38%), Positives = 371/638 (58%), Gaps = 36/638 (5%)

Query: 246 RDLVSWNTIVSSLSQND--KFLEAVMFLRQMA--LRG--IKPDGVSIASVLPACSHLEML 299
           R L S    VS  S+++  KF    + LR  +  L G  I  D     ++L  C+  ++L
Sbjct: 17  RRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLL 76

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+ +HA+ L++ I   +  +G+ L++MY  C  +E  R+VF+ +  +    W  +I+G
Sbjct: 77  IQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y Q++   +AL+ F +M    G  PN  T+SSV+ A            +HG  +K G   
Sbjct: 136 YSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           + +V +AL+D+Y+R G ++ ++ +FD +E R+ VSWN +I G+        AL L + M 
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM- 253

Query: 480 NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
                             LR   +P+  +  ++   C +   L +GK +HAY I++    
Sbjct: 254 ------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
               G+ L+DMYAK G ++ AR++FD +  R+V++WN ++ AY  HG G+E +   + M 
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
             G     ++PNE++F+++  ACSHSG++ EG   +  MK D GI P   HY  VVDLLG
Sbjct: 356 RVG-----IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAG +  A + I  MP E   A  W +LL ACR+H+N E+G  AA+++F L+PD    +V
Sbjct: 410 RAGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           +L NIY+S   W+ A  VRKKMKE GV+KEP CSW+E  + IH F+A D  H Q E++  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
             E +  ++++ GYVPDTS V+ +V+++E+E  L  HSEK+A+AF +LNTPPG+TI + K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           N+RVC DCH A K  SK+  REII+RD  RFHHFK+ +
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 232/446 (52%), Gaps = 25/446 (5%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
            SLP P S+    +S  ESL+  +     R    S  ++  S I  D   +  +LK    
Sbjct: 20  NSLPAPVSE----DSEDESLKFPSNDLLLRT---SSNDLEGSYIPADRRFYNTLLKKCTV 72

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
            + L  G+ +HAH+++  +    + + NTL+NMY KCGS + +  KVF+++ ++D V+W 
Sbjct: 73  FKLLIQGRIVHAHILQSIFR-HDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWT 130

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           ++I+   +  +   AL  F  ML     P+ FTL SV  A +  + R G   G Q+HG  
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGC-CGHQLHGFC 187

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           ++ G + N  + +AL+ +Y + G +DDA+ +F + E R+ VSWN +++  ++     +A+
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN-DILIDNSFVGSALVD 327
              + M   G +P   S AS+  ACS    L+ GK +HAY +++ + L+  +F G+ L+D
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLD 305

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     +   R++FD ++ + +  WN+++T Y Q+ + +EA+  F +M  V G+ PN  
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEI 364

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           +  SV+ AC  S      EG H + +  K G+  + +    ++D+  R G +  +    +
Sbjct: 365 SFLSVLTACSHSGLL--DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422

Query: 446 DMEVRDTVS-WNTMITGYTICGQHGD 470
           +M +  T + W  ++     C  H +
Sbjct: 423 EMPIEPTAAIWKALLNA---CRMHKN 445



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 21/384 (5%)

Query: 202 GRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           GR VH + L+    +  +M N L+ MYAK G +++A+ +F+    RD V+W T++S  SQ
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           +D+  +A++F  QM   G  P+  +++SV+ A +       G ++H + ++      N  
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDSNVH 197

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           VGSAL+D+Y     ++  + VFD +  +    WNA+I G+ +    E+AL LF  M    
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR-D 256

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G  P+  + +S+  AC  +      + +H + IK G     +  N L+DMY++ G I  +
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + IFD +  RD VSWN+++T Y   G   +A+    EM+ +                   
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-----------------I 359

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +PN I+ ++VL  C     L +G   +    ++ +  +      +VD+  + G LN A R
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 561 VFDLMPVR-NVITWNVIIMAYGMH 583
             + MP+      W  ++ A  MH
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 344/596 (57%), Gaps = 26/596 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+L +C   + L+ GK++HA   +  I   N  + + LV+ Y  C  +     +FD I 
Sbjct: 62  ASLLESCISAKALEPGKQLHARLCQLGIAY-NLDLATKLVNFYSVCNSLRNAHHLFDKIP 120

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
              + LWN +I  Y  N   E A+ L+ +M E  GL P+  T+  V+ AC       +  
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEY-GLKPDNFTLPFVLKACSALSTIGEGR 179

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH   I+ G  RD +V  AL+DMY++ G +  ++ +FD +  RD V WN+M+  Y   G
Sbjct: 180 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG 239

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              ++L L  EM                      +P   TL+TV+     ++ L  G+EI
Sbjct: 240 HPDESLSLCCEM-----------------AAKGVRPTEATLVTVISSSADIACLPHGREI 282

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H +  R+    +  V +AL+DMYAKCG +  A  +F+ +  + V++WN II  Y MHG  
Sbjct: 283 HGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLA 342

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            E L+L + M+ E       +P+ +TF+   AACS   ++ EG  L+  M  D  I P+ 
Sbjct: 343 VEALDLFERMMKEA------QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTV 396

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C+VDLLG  G++++AY LI  M    D +G W +LL +C+ H NVE+ E+A + L 
Sbjct: 397 EHYTCMVDLLGHCGQLDEAYDLIRQMDVMPD-SGVWGALLNSCKTHGNVELAEVALEKLI 455

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            LEPD + +YV+L+N+Y+ +  W+    +R+ M + G++K   CSWIE  ++++ FL+GD
Sbjct: 456 ELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGD 515

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH  S  ++  L+ L   MR+ GYVPDT  V H+V E+EK  ++C HSE+LAIAFG+++
Sbjct: 516 VSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLIS 575

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           T PGT + + KNLR+C DCH A KFISKI  REI +RDV R+HHF++G CSCGDYW
Sbjct: 576 TLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 219/423 (51%), Gaps = 21/423 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           +++ + ++L++    + L  GKQ+HA + + G   + + +A  LVN Y  C S + + + 
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYN-LDLATKLVNFYSVCNS-LRNAHH 114

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD+I + +   WN +I      G  + A+  +  ML   ++P +FTL  V  ACS LS 
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              +  GR +H   +R G E + F+  AL+ MYAK G V DA+ +F    DRD V WN++
Sbjct: 175 ---IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSM 231

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +++ +QN    E++    +MA +G++P   ++ +V+ + + +  L  G+EIH +  R+  
Sbjct: 232 LAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGF 291

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             ++  V +AL+DMY  C  V+    +F+ + +K++  WNA+ITGY  +    EAL LF 
Sbjct: 292 QYNDK-VKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFE 350

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMY 431
           +M + A   P+  T    + AC R     +   ++   +   ++    + Y    ++D+ 
Sbjct: 351 RMMKEAQ--PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHY--TCMVDLL 406

Query: 432 SRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD---ALMLLREMQNMEEEKNR 487
              G+++ +  +   M+V  D+  W  ++     C  HG+   A + L ++  +E + + 
Sbjct: 407 GHCGQLDEAYDLIRQMDVMPDSGVWGALLNS---CKTHGNVELAEVALEKLIELEPDDSG 463

Query: 488 NNV 490
           N V
Sbjct: 464 NYV 466



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 17/341 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+ A +     AI  Y +M    ++PDNF  P VLKA + +  +  G+ IH  V+
Sbjct: 127 WNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVI 186

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G+    V V   LV+MY KCG  + D   VFD+I ++D V WNSM+A   + G  D +
Sbjct: 187 RSGWE-RDVFVGAALVDMYAKCGC-VVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDES 244

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L     M    V P+  TLV+V  + ++++    L  GR++HG   R G ++N  +  AL
Sbjct: 245 LSLCCEMAAKGVRPTEATLVTVISSSADIA---CLPHGREIHGFGWRHGFQYNDKVKTAL 301

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G V  A  LF+   ++ +VSWN I++  + +   +EA+    +M ++  +PD 
Sbjct: 302 IDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM-MKEAQPDH 360

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           ++    L ACS   +LD G+ ++   +R+  +       + +VD+  +C +++     +D
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD---EAYD 417

Query: 344 FISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
            I    +     +W A++     +G  E  E AL   I++E
Sbjct: 418 LIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELE 458


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/812 (33%), Positives = 426/812 (52%), Gaps = 83/812 (10%)

Query: 128 SDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY------SNVEPS 179
           S M D  K+FD   +  KD VSW +MI+   + G    + E F +M+        N +P 
Sbjct: 88  SRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPF 147

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
           SFT  SV  AC +L      RL  Q+H    ++G    T I N+++ MY K G VD A+T
Sbjct: 148 SFT--SVMKACGSLGDS---RLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202

Query: 239 LFKSFE-------------------------------DRDLVSWNTIVSSLSQNDKFLEA 267
           +F   E                               +RD VSWNT++S  SQ+   ++ 
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +    +M  +G  P+ ++  SVL AC+    L  G  +HA  LR +  +D  F G+ L+D
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVF-GNGLID 321

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++  +RVF  + +     WN++ITG       E+AL+LF +M   + +  +  
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRR-SSVVLDEF 380

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
            + +++  C   +     E +HG+ IK G+G    V NA++ MY++ G  + +  +F  M
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP------- 500
            +R+T+SW  MIT ++  G  G A    R   +M  E+N      +  T ++        
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKA----RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGL 496

Query: 501 -----------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                      +P+ IT  T +  C  L+ +  G ++  +A +  L+ +V V +++V MY
Sbjct: 497 KLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMY 556

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           ++CG +  A+  FD +  +++I+WN ++ A+  +G G +V++  ++M+       E KPN
Sbjct: 557 SRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKT-----ECKPN 611

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            ++++++ + CSH G+V+EG   F  M   +GI P+ +H++C+VDLLGRAG +E A  LI
Sbjct: 612 HISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLI 671

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
             MP +   A  WS+LLG+CR+H ++ + E AA+ L  L+ + +  YVLLSN+YS +   
Sbjct: 672 EGMPFK-PNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGEL 730

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           D   D+RK MK  G+R   GCSWIE  + +H F   + SH Q ++++  LE + + +   
Sbjct: 731 DNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDT 790

Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
           G        +H   +         HSEKLA AFG+LN P    I V KNLRVC+DCH   
Sbjct: 791 GKYITVESSVHRSKKY--------HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVI 842

Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           K +S + SRE+I+RD  RFHHFK+G CSC DY
Sbjct: 843 KLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 159/595 (26%), Positives = 276/595 (46%), Gaps = 90/595 (15%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-------- 127
           D F+F +V+KA   + D  L  Q+HA V K G+G+ +  + N++V MY KCG        
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETC-IQNSVVGMYVKCGDVDLAETV 203

Query: 128 -------------------SDMWDVYK---VFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
                              S M+  YK   +F+R+ E+D+VSWN++I+   + G     L
Sbjct: 204 FFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCL 263

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALM 224
             F  M      P+  T  SV  AC++ S    L+ G  +H   LR+      +  N L+
Sbjct: 264 AMFVEMCNQGFSPNFMTYGSVLSACASTS---DLKWGAHLHARILRMEHSLDLVFGNGLI 320

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            MYAK G +D AK +FKS  + D +SWN++++ +       +A++   QM    +  D  
Sbjct: 321 DMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEF 380

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC------------ 332
            + ++L  CS  +   TG+ +H Y +++  +  ++ VG+A++ MY  C            
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSG-MGSSAPVGNAIITMYAKCGDTDKADLVFRL 439

Query: 333 -----------------REVECG--RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
                            R  + G  R  FD + ++ I  WN+M++ Y QN + EE L L+
Sbjct: 440 MPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLY 499

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           + M    G+ P+  T ++ + AC           +  HA K GL  +  V N+++ MYSR
Sbjct: 500 VSMRS-NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
            G I+ +K  FD ++ +D +SWN M+  +    Q+G  + ++   ++M + +        
Sbjct: 559 CGLIKEAKNTFDSIDDKDLISWNAMLAAF---AQNGLGIKVIDTFEDMLKTE-------- 607

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKC 552
                  KPN I+ ++VL GC  +  +A+GK       R   ++      S +VD+  + 
Sbjct: 608 ------CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRA 661

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRG 603
           G L  A+ + + MP + N   W+ ++ +  +H +    +   + L  +  EGS G
Sbjct: 662 GLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEG 716



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 232/565 (41%), Gaps = 132/565 (23%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-------- 277
           MY+  G   DA  +F+    R++ +WNT++ +L  + +  +A     +M +R        
Sbjct: 52  MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111

Query: 278 -----------------------------GIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
                                        G   D  S  SV+ AC  L       ++HA 
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171

Query: 309 ALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
             +     +  I NS VG     MY  C +V+    VF  I    +  WN+MI GY Q  
Sbjct: 172 VSKLGFGMETCIQNSVVG-----MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMY 226

Query: 365 YDEEALMLFIKM---EEVA---------------------------GLWPNATTMSSVVP 394
              +AL +F +M   +EV+                           G  PN  T  SV+ 
Sbjct: 227 GPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLS 286

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC  +        +H   +++    D    N L+DMY++ G ++++K +F  +   D +S
Sbjct: 287 ACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHIS 346

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN++ITG    G   DAL+L  +M+       R++V  LDE +L          T+L  C
Sbjct: 347 WNSLITGVVHFGLGEDALILFNQMR-------RSSVV-LDEFILP---------TILGVC 389

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC---------------------- 552
                 + G+ +H Y I++ + +   VG+A++ MYAKC                      
Sbjct: 390 SGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWT 449

Query: 553 ---------GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
                    G +  AR  FD+MP RN++TWN ++  Y  +G  +E L+L  +M + G   
Sbjct: 450 AMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG--- 506

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             V+P+ +TF     AC+   +V  GM +       +G+  +      +V +  R G ++
Sbjct: 507 --VQPDWITFTTSIRACADLAIVKLGMQVV-THATKFGLSLNVSVANSIVTMYSRCGLIK 563

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGA 688
           +A    + +  +     +W+++L A
Sbjct: 564 EAKNTFDSIDDK--DLISWNAMLAA 586



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 50/448 (11%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           + +  ++EM      P+   + +VL A A   DL  G  +HA +++  + L  V   N L
Sbjct: 261 QCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV-FGNGL 319

Query: 120 VNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           ++MY KCG  D+    +VF  + E D +SWNS+I  +  FG  + AL  F  M  S+V  
Sbjct: 320 IDMYAKCGCLDL--AKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVL 377

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAK 237
             F L ++   CS     D    G  +HG +++ G  ++  + NA++ MYAK G  D A 
Sbjct: 378 DEFILPTILGVCSG---PDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKAD 434

Query: 238 TLFK-------------------------------SFEDRDLVSWNTIVSSLSQNDKFLE 266
            +F+                                  +R++V+WN+++S+  QN    E
Sbjct: 435 LVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE 494

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
            +     M   G++PD ++  + + AC+ L ++  G ++  +A +  + ++ S V +++V
Sbjct: 495 GLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVS-VANSIV 553

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
            MY  C  ++  +  FD I DK +  WNAM+  + QN    + +  F  M +     PN 
Sbjct: 554 TMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE-CKPNH 612

Query: 387 TTMSSVVPACVRSEAFPDKEGIH---GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
            +  SV+  C  S      EG H         G+       + ++D+  R G +E +K +
Sbjct: 613 ISYVSVLSGC--SHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDL 670

Query: 444 FDDMEVR-DTVSWNTMITGYTICGQHGD 470
            + M  + +   W+ ++     C  H D
Sbjct: 671 IEGMPFKPNATVWSALLGS---CRVHHD 695



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L +  ++    E +  Y+ M  + +QPD   F   ++A A +  + LG Q+  H 
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G  L +V+VAN++V MY +CG  + +    FD I +KD +SWN+M+A   + G    
Sbjct: 538 TKFGLSL-NVSVANSIVTMYSRCGL-IKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIK 595

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            ++ F  ML +  +P+  + VSV   CS++
Sbjct: 596 VIDTFEDMLKTECKPNHISYVSVLSGCSHM 625



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 17/225 (7%)

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
            +++HA  I + L + + + + L+ MY+ CG  + A +VF     RN+ TWN +I A   
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM---KDD 639
                +  +L   M         VK + V++  + +  S +G  S   + F  M    +D
Sbjct: 87  SSRMSDAEKLFDEMPV------RVK-DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTND 139

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLLGACRIHQNVEIG 698
            G    P  +  V+   G  G    A QL  ++     K G    + +    +   V+ G
Sbjct: 140 GGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVS----KLGFGMETCIQNSVVGMYVKCG 195

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD--KAMDVRKKMKE 741
           ++        + +  S +   S IY  +Q++   KA+ +  +M E
Sbjct: 196 DVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPE 240


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/724 (36%), Positives = 393/724 (54%), Gaps = 34/724 (4%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P N +F   L      + L  GK +HA ++K     S V +AN+LVN+Y KC   + +  
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS--SCVYIANSLVNLYAKC-QRLREAK 60

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLA--LEAFRMMLYSNVEPSSFTLVSVALACSN 192
            VF+RI  KD VSWN +I    + G    +  +E F+ M   N  P++ T   V  A S 
Sbjct: 61  FVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120

Query: 193 LSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           L    G   GR  H  ++++    + F+ ++LM MY K G   +A+ +F +  +R+ VSW
Sbjct: 121 LVDAAG---GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSW 177

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            T++S  +      EA+   R M       +     SVL A +  E+++ GK+IH  A++
Sbjct: 178 ATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVK 237

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           N +L   S VG+ALV MY  C  ++   + F+  SDK    W+AMITGY Q+   ++AL 
Sbjct: 238 NGLLSIVS-VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALK 296

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF  M  ++G+ P+  T   V+ AC    A  + + +H + +KLG     YV  AL+DMY
Sbjct: 297 LFSSMH-LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMY 355

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           ++   I  ++  FD ++  D V W +MI GY   G++ DAL L   M+            
Sbjct: 356 AKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEM----------- 404

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
              E +L   PN +T+ +VL  C +L+AL +GK+IHA  ++     +V +GSAL  MYAK
Sbjct: 405 ---EGIL---PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CGCL     VF  MP R+VI+WN +I     +G G+E LEL + M  EG+     KP+ V
Sbjct: 459 CGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGT-----KPDYV 513

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           TF+ + +ACSH G+V  G   F  M D++G++P  +HYAC+VD+L RAGK+++A +    
Sbjct: 514 TFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTES 573

Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
              +      W  +LGACR ++N E+G  A + L  L    +S YVLLS+IYS+   W+ 
Sbjct: 574 ATIDHGMC-LWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWED 632

Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
              VR+ MK  GV KEPGCSWIE    +H F+  D  H Q   +H  L  LS++M+ EGY
Sbjct: 633 VERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGY 692

Query: 792 VPDT 795
            P T
Sbjct: 693 EPAT 696



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 196/358 (54%), Gaps = 8/358 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +   A      EA+  +  M R +   + F F +VL A+   + ++ GKQI
Sbjct: 172 RNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQI 231

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   VK G  LS V+V N LV MY KCGS + D  + F+  ++K+ ++W++MI    + G
Sbjct: 232 HCIAVKNGL-LSIVSVGNALVTMYAKCGS-LDDALQTFETSSDKNSITWSAMITGYAQSG 289

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
             D AL+ F  M  S + PS FT V V  ACS+L        G+QVH   L++G E   +
Sbjct: 290 DSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLG---AAWEGKQVHDYLLKLGFESQIY 346

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +M AL+ MYAK   + DA+  F   ++ D+V W +++    QN +  +A+    +M + G
Sbjct: 347 VMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEG 406

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I P+ +++ASVL ACS L  L+ GK+IHA  ++    ++   +GSAL  MY  C  ++ G
Sbjct: 407 ILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVP-IGSALSTMYAKCGCLKDG 465

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             VF  +  + +  WNAMI+G  QN   +EAL LF +M ++ G  P+  T  +++ AC
Sbjct: 466 TLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM-QLEGTKPDYVTFVNILSAC 522



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 140/260 (53%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+S    +A+  +  M  S I+P  F F  V+ A + +     GKQ+H ++
Sbjct: 277 TWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL 336

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S + V   LV+MY KC S + D  K FD + E D V W SMI    + G+ + 
Sbjct: 337 LKLGFE-SQIYVMTALVDMYAKC-SSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENED 394

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  +  M    + P+  T+ SV  ACS+L+    L  G+Q+H  +++ G      I +A
Sbjct: 395 ALSLYGRMEMEGILPNELTMASVLKACSSLA---ALEQGKQIHARTVKYGFGLEVPIGSA 451

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MYAK G + D   +F+    RD++SWN ++S LSQN    EA+    +M L G KPD
Sbjct: 452 LSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPD 511

Query: 283 GVSIASVLPACSHLEMLDTG 302
            V+  ++L ACSH+ +++ G
Sbjct: 512 YVTFVNILSACSHMGLVERG 531


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/705 (35%), Positives = 383/705 (54%), Gaps = 63/705 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM----FL 271
           N F  NAL++  A    + D   LF S   RD VS+N +++  S       A       L
Sbjct: 75  NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134

Query: 272 RQMAL---RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           R+ A+     ++P  ++++ ++ A S L     G+++H   +R       +F  S LVDM
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLG-FGAYAFTWSPLVDM 193

Query: 329 YCN-------------------------------CREVECGRRVFDFISDKKIALWNAMI 357
           Y                                 C+ VE  R VF+ + D+    W  M+
Sbjct: 194 YAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMV 253

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
           TG  QN    EAL +F +M    G+  +  T  S++ AC    A  + + IH + I+   
Sbjct: 254 TGLTQNGLQSEALDVFRRMR-AEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLY 312

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             + +V +AL+DMYS+   I +++ +F  M  ++ +SW  MI GY   G   +A+ +  E
Sbjct: 313 DGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSE 372

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           MQ        + +          KPN  TL +V+  C  L++L +G + H  A+ + L  
Sbjct: 373 MQT-------DGI----------KPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRP 415

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
            + V SALV +Y KCG +  A R+FD MP  + +++  ++  Y   G+ +E ++L + M+
Sbjct: 416 YITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKML 475

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            +G     VKPN VTFI + +ACS SG+V +G   F+ M+ D+GI    DHY C++DL  
Sbjct: 476 LKG-----VKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYS 530

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           R+G++++A + I  MP   D  G W++LL ACR+  ++EIG+ AA+NL   +P   + YV
Sbjct: 531 RSGRLKEAEEFIRQMPRCPDAIG-WATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYV 589

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LL ++++S   W +   +R+ M++  V+KEPGCSWI++ + +H F A D SH  S  ++ 
Sbjct: 590 LLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYE 649

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            L+ L+ +M +EGY PD S VLH+V + EK  +L  HSEKLAIAFG++  P    IRV K
Sbjct: 650 KLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVK 709

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLRVC DCH ATKFISKI  R+I++RD  RFH F NG CSCGD+W
Sbjct: 710 NLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 235/495 (47%), Gaps = 63/495 (12%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-------SNVEPSSFTLV 184
           D+ ++F  + ++D VS+N++IA     G    A  A+R +L        + V PS  T+ 
Sbjct: 94  DMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMS 153

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS- 242
            + +A S L  R    LGRQVH   +R+G     F  + L+ MYAK+G + DAK +F   
Sbjct: 154 GMVMAASALGDRA---LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210

Query: 243 ---------------------------FE---DRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
                                      FE   DRD ++W T+V+ L+QN    EA+   R
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           +M   G+  D  +  S+L AC  L   + GK+IHAY +R  +   N FVGSALVDMY  C
Sbjct: 271 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT-LYDGNIFVGSALVDMYSKC 329

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           R +     VF  ++ K I  W AMI GYGQN   EEA+ +F +M +  G+ PN  T+ SV
Sbjct: 330 RSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEM-QTDGIKPNDFTLGSV 388

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + +C    +  +    H  A+  GL     V +AL+ +Y + G IE +  +FD+M   D 
Sbjct: 389 ISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQ 448

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VS+  +++GY   G+  + + L  +M              L + V   KPN +T + VL 
Sbjct: 449 VSYTALVSGYAQFGKAKETIDLFEKM--------------LLKGV---KPNGVTFIGVLS 491

Query: 513 GCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNV 570
            C     + KG    H+    + +       + ++D+Y++ G L  A      MP   + 
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDA 551

Query: 571 ITWNVIIMAYGMHGE 585
           I W  ++ A  + G+
Sbjct: 552 IGWATLLSACRLRGD 566



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 197/423 (46%), Gaps = 63/423 (14%)

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +H   LR       ++V + L+  Y     +   RR+FD + D  +   NA+++      
Sbjct: 31  VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90

Query: 365 YDEEALMLFIKMEE---------VAG----------------------------LWPNAT 387
              +   LF  M +         +AG                            + P+  
Sbjct: 91  LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150

Query: 388 TMSSVVPACVRSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           TMS +V A   + A  D+     +H   ++LG G   +  + L+DMY++MG I  +K +F
Sbjct: 151 TMSGMVMA---ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVF 207

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP-- 502
           D+M V++ V +NTMITG   C    +A  +   M + +       V  L +  L+ +   
Sbjct: 208 DEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALD 267

Query: 503 ------------NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                       +  T  ++L  CGAL+A  +GK+IHAY IR +   ++ VGSALVDMY+
Sbjct: 268 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYS 327

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KC  +  A  VF  M  +N+I+W  +I+ YG +G G+E + +   M  +G     +KPN+
Sbjct: 328 KCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG-----IKPND 382

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            T  ++ ++C++   + EG   F+ M    G+ P     + +V L G+ G +EDA++L +
Sbjct: 383 FTLGSVISSCANLASLEEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFD 441

Query: 671 MMP 673
            MP
Sbjct: 442 EMP 444



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 209/434 (48%), Gaps = 48/434 (11%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDM 130
           ++P       ++ A + + D +LG+Q+H  +++ G+G  + T  + LV+MY K G   D 
Sbjct: 145 VRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFT-WSPLVDMYAKMGLIGDA 203

Query: 131 WDVYK----------------------------VFDRITEKDQVSWNSMIATLCRFGKWD 162
             V+                             VF+ + ++D ++W +M+  L + G   
Sbjct: 204 KRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQS 263

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMN 221
            AL+ FR M    V    +T  S+  AC  L+  +    G+Q+H  ++R + + N F+ +
Sbjct: 264 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEE---GKQIHAYTIRTLYDGNIFVGS 320

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL+ MY+K   +  A+ +F+    ++++SW  ++    QN    EAV    +M   GIKP
Sbjct: 321 ALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKP 380

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           +  ++ SV+ +C++L  L+ G + H  AL +  L     V SALV +Y  C  +E   R+
Sbjct: 381 NDFTLGSVISSCANLASLEEGAQFHCMALVSG-LRPYITVSSALVTLYGKCGSIEDAHRL 439

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +       + A+++GY Q    +E + LF KM  + G+ PN  T   V+ AC RS  
Sbjct: 440 FDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKM-LLKGVKPNGVTFIGVLSACSRS-G 497

Query: 402 FPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWN 456
             +K   + H+++   G     D Y    ++D+YSR GR++ ++     M    D + W 
Sbjct: 498 LVEKGCSYFHSMQQDHGIVLLDDHY--TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWA 555

Query: 457 TMITGYTICGQHGD 470
           T+++    C   GD
Sbjct: 556 TLLSA---CRLRGD 566



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 150/290 (51%), Gaps = 12/290 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++    EA+  +  M    +  D + F ++L A   +     GKQIHA+ 
Sbjct: 248 TWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYT 307

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  Y   ++ V + LV+MY KC S +     VF R+T K+ +SW +MI    + G  + 
Sbjct: 308 IRTLYD-GNIFVGSALVDMYSKCRS-IRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEE 365

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A+  F  M    ++P+ FTL SV  +C+NL+    L  G Q H  +L  G      + +A
Sbjct: 366 AVRVFSEMQTDGIKPNDFTLGSVISSCANLA---SLEEGAQFHCMALVSGLRPYITVSSA 422

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G ++DA  LF      D VS+  +VS  +Q  K  E +    +M L+G+KP+
Sbjct: 423 LVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPN 482

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRND---ILIDNSFVGSALVDMY 329
           GV+   VL ACS   +++ G   + ++++ D   +L+D+ +  + ++D+Y
Sbjct: 483 GVTFIGVLSACSRSGLVEKGCS-YFHSMQQDHGIVLLDDHY--TCMIDLY 529



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 22/228 (9%)

Query: 41  CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           CK   SW   +    ++    EA+  + EM    I+P++F   +V+ + A +  L  G Q
Sbjct: 344 CKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQ 403

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
            H   +  G     +TV++ LV +YGKCGS + D +++FD +   DQVS+ ++++   +F
Sbjct: 404 FHCMALVSGL-RPYITVSSALVTLYGKCGS-IEDAHRLFDEMPFHDQVSYTALVSGYAQF 461

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL--------RLGRQVHGNSL 210
           GK    ++ F  ML   V+P+  T + V  ACS    R GL           +Q HG  L
Sbjct: 462 GKAKETIDLFEKMLLKGVKPNGVTFIGVLSACS----RSGLVEKGCSYFHSMQQDHGIVL 517

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSS 257
               +   I      +Y++ GR+ +A+   +      D + W T++S+
Sbjct: 518 LDDHYTCMI-----DLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/759 (32%), Positives = 427/759 (56%), Gaps = 58/759 (7%)

Query: 60  EAILSYIEMTRSDIQP--DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           +A+L Y  M R+   P  D++ F + LKA A  + L LGK +H HV++  +G SS  V N
Sbjct: 86  DALLFYARM-RASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFG-SSRIVYN 143

Query: 118 TLVNMYGKCGSDM------WD------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
           +L+NMY  C +++      +D      V +VFD + +++ V+WN+MI+   +  +   A 
Sbjct: 144 SLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAF 203

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW---NTFIMNA 222
           + FR M+   + P+  + V+V  A   ++  D   +   ++G  +++G     + F++++
Sbjct: 204 KMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANV---LYGLVVKLGSDYVDDFFVVSS 260

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
            + MYA+LG VD A+ +F    +R+   WNT++    QN+  +EA+ +F++ M       
Sbjct: 261 AIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXL 320

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V+  S L A S L+ LD G+++HAY L++  ++    + +A++ MY  C  +    +V
Sbjct: 321 DDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQ-VVILNAIIVMYSRCGSIGTSFKV 379

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  + ++ +  WN M++ + QN  D+E LML  +M++  G   ++ T+++++       +
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQK-QGFMVDSVTLTALLSLASNLRS 438

Query: 402 FPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWN 456
               +  H + I+ G+   G D Y    L+DMY++ G I  ++ +F+      RD  +WN
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDGY----LIDMYAKSGLITTAQQLFEKNSXYDRDEATWN 494

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI GYT  G   +   + R+M              +++ V   +PN++TL ++LP C  
Sbjct: 495 AMIAGYTQNGLSEEGFAVFRKM--------------IEQNV---RPNAVTLASILPACNP 537

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           +  +  GK+IH +AIR  L  +V VG+AL+DMY+K G + +A  VF     +N +T+  +
Sbjct: 538 MGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTM 597

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I++YG HG G+  L L   M+  G     +KP+ VTF+A+ +ACS++G+V EG+ +F  M
Sbjct: 598 ILSYGQHGMGERALSLFHAMLGSG-----IKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
           + +Y I+PS +HY CV D+LGR G+V +AY+ +  +  E +    W SLLGACRIH   E
Sbjct: 653 EREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFE 712

Query: 697 IGEIAAQNLFLLEPD--VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +G++ A  L  +E    +  ++VLLSNIY++   WD    VRK+M++ G+ KE GCSW+E
Sbjct: 713 LGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
               ++ F++ D  H Q  +++  LE L+  M+  GY P
Sbjct: 773 VAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 244/492 (49%), Gaps = 37/492 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++ +  EA   +  M R  I+P   +F  V  AV  + D      ++  V
Sbjct: 185 AWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLV 244

Query: 104 VKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G   +    V ++ + MY + G   +   ++FD   E++   WN+MI     + + +
Sbjct: 245 VKLGSDYVDDFFVVSSAIFMYAELGCVDF-AREIFDCCLERNTEVWNTMIGG---YVQNN 300

Query: 163 LALEAFRMMLYSNVEPSSFTL--VSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFI 219
             +EA  + +   +E   F L  V+   A + +S+   L LGRQ+H   L+        I
Sbjct: 301 CPIEAIDLFV-QVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVI 359

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           +NA++ MY++ G +  +  +F +  +RD+V+WNT+VS+  QN    E +M + +M  +G 
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGF 419

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             D V++ ++L   S+L   + GK+ HAY +R+ I  +   +   L+DMY     +   +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDGYLIDMYAKSGLITTAQ 477

Query: 340 RVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
           ++F+  S  D+  A WNAMI GY QN   EE   +F KM E   + PNA T++S++PAC 
Sbjct: 478 QLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE-QNVRPNAVTLASILPACN 536

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                   + IHG AI+  L ++ +V  AL+DMYS+ G I  ++ +F +   +++V++ T
Sbjct: 537 PMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTT 596

Query: 458 MITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           MI  Y   GQHG    AL L   M              L   +   KP+S+T + +L  C
Sbjct: 597 MILSY---GQHGMGERALSLFHAM--------------LGSGI---KPDSVTFVAILSAC 636

Query: 515 GALSALAKGKEI 526
                + +G  I
Sbjct: 637 SYAGLVDEGLRI 648



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 223/487 (45%), Gaps = 63/487 (12%)

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIA 287
           + G    A  LF S      V WNTI+     N+  ++A++F  +M A    K D  + +
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC-------------RE 334
           S L AC+    L  GK +H + LR+     +  V ++L++MY  C               
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSH-FGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            +  RRVFD +  + +  WN MI+ Y + E   EA  +F  M  + G+ P   +  +V P
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-GIRPTPVSFVNVFP 226

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGR--DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           A  R   + +   ++G  +KLG     D +V ++ + MY+ +G ++ ++ IFD    R+T
Sbjct: 227 AVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
             WNTMI GY       +A+ L   +Q ME E+     + LD+         +T ++ L 
Sbjct: 287 EVWNTMIGGYVQNNCPIEAIDLF--VQVMESEQ-----FXLDD---------VTFLSALT 330

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
               L  L  G+++HAY +++     VV+ +A++ MY++CG +  + +VF  M  R+V+T
Sbjct: 331 AISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVT 390

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS----------- 621
           WN ++ A+  +G   E L L+  M  +G        + VT  AL +  S           
Sbjct: 391 WNTMVSAFVQNGLDDEGLMLVFEMQKQG-----FMVDSVTLTALLSLASNLRSQEIGKQA 445

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+ ++  G+   ++  D Y           ++D+  ++G +  A QL             
Sbjct: 446 HAYLIRHGIQ--FEGMDGY-----------LIDMYAKSGLITTAQQLFEKNSXYDRDEAT 492

Query: 682 WSSLLGA 688
           W++++  
Sbjct: 493 WNAMIAG 499



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 3/163 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   +    ++    E    + +M   +++P+     ++L A   +  + LGKQI
Sbjct: 488 RDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQI 547

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   ++  +   +V V   L++MY K G+  +    VF    EK+ V++ +MI +  + G
Sbjct: 548 HGFAIR-CFLNQNVFVGTALLDMYSKSGAITY-AENVFAETLEKNSVTYTTMILSYGQHG 605

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRL 201
             + AL  F  ML S ++P S T V++  ACS     D GLR+
Sbjct: 606 MGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/656 (37%), Positives = 371/656 (56%), Gaps = 30/656 (4%)

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +  A+ LF    +R +V+WN+I++   ++ +  EAV   R M    + PD  +++S
Sbjct: 93  KCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSS 152

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           V  A S L +    +  H  A+   + + N FVGSALVDMY    +    + V D + +K
Sbjct: 153 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 212

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            + L  A+I GY Q   D EA+  F  M  V  + PN  T +SV+ +C   +   + + I
Sbjct: 213 DVVLITALIVGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNGKLI 271

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           HG  +K G       Q +L+ MY R   ++ S  +F  ++  + V+W ++I+G    G+ 
Sbjct: 272 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGRE 331

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
             AL+  R+M        R++V          KPNS TL + L GC  L+   +G+++H 
Sbjct: 332 ETALIEFRKMM-------RDSV----------KPNSFTLSSALRGCSNLAMFEEGRQVHG 374

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
              +     D   GS L+++Y KCGC + AR VFD +   +VI+ N +I +Y  +G G+E
Sbjct: 375 IVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 434

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            LEL + M+  G     ++PN+VT +++  AC++SG+V EG +LF   + D  I  + DH
Sbjct: 435 ALELFERMINLG-----LQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDH 488

Query: 649 YACVVDLLGRAGKVEDAYQLIN-MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           YAC+VD+LGRAG++E+A  LI  +  P+      W +LL AC++H+ VE+ E   + +  
Sbjct: 489 YACMVDMLGRAGRLEEAEMLITEVTNPDL---VLWRTLLSACKVHRKVEMAERITRKILE 545

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD- 766
           + P      +LLSN+Y+S   W + ++++ KMKEM ++K P  SW+E   E H F+AGD 
Sbjct: 546 IAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDL 605

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH  SEQ+   LE L ++ +  GYV D SCV  ++ E  KE  L  HSEKLAIAF +  
Sbjct: 606 FSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR 665

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              G +IR+ KNLRVC DCH   K +S+I  REII RD +RFHHF++G+CSCGDYW
Sbjct: 666 NVGG-SIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 277/565 (49%), Gaps = 39/565 (6%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
            F  +L+     + +S  K I A ++K G+ +      + LV+   KCG ++    ++FD
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVE--LSGSKLVDASLKCG-EIGYARQLFD 105

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + E+  V+WNS+IA   +  +   A+E +R+M+ +NV P  +TL SV  A S+LS    
Sbjct: 106 GMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLE-- 163

Query: 199 LRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            +  ++ HG ++ +G    N F+ +AL+ MY K G+  +AK +    E++D+V    ++ 
Sbjct: 164 -KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 222

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             SQ  +  EAV   + M +  ++P+  + ASVL +C +L+ +  GK IH   +++    
Sbjct: 223 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG--F 280

Query: 317 DNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           +++    ++L+ MY  C  V+    VF  I       W ++I+G  QN  +E AL+ F K
Sbjct: 281 ESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRK 340

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M     + PN+ T+SS +  C     F +   +HG   K G  RD+Y  + L+++Y + G
Sbjct: 341 MMR-DSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCG 399

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
             ++++ +FD +   D +S NTMI  Y   G   +AL L   M N               
Sbjct: 400 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMIN--------------- 444

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCG 553
             L  +PN +T+++VL  C     + +G E+     ++  ML  D    + +VDM  + G
Sbjct: 445 --LGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHY--ACMVDMLGRAG 500

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            L  A  +   +   +++ W  ++ A  +H +  E+ E +   + E + G     +E T 
Sbjct: 501 RLEEAEMLITEVTNPDLVLWRTLLSACKVHRK-VEMAERITRKILEIAPG-----DEGTL 554

Query: 614 IALFAACSHSGMVSEGMDLFYKMKD 638
           I L    + +G     +++  KMK+
Sbjct: 555 ILLSNLYASTGKWKRVIEMKSKMKE 579



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 212/409 (51%), Gaps = 17/409 (4%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI---HAHVVKYGYGLSSVTV 115
           +EA+  Y  M  +++ PD +   +V KA +   DLSL K+    H   V  G  +S+V V
Sbjct: 129 KEAVEMYRLMISNNVLPDEYTLSSVFKAFS---DLSLEKEAQRSHGLAVILGLEVSNVFV 185

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            + LV+MY K G    +   V DR+ EKD V   ++I    + G+   A++AF+ ML   
Sbjct: 186 GSALVDMYVKFGKTR-EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 244

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           V+P+ +T  SV ++C NL     +  G+ +HG  ++ G E       +L+ MY +   VD
Sbjct: 245 VQPNEYTYASVLISCGNLK---DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 301

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           D+  +FK  +  + V+W +++S L QN +   A++  R+M    +KP+  +++S L  CS
Sbjct: 302 DSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCS 361

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +L M + G+++H    +     D  + GS L+++Y  C   +  R VFD +S+  +   N
Sbjct: 362 NLAMFEEGRQVHGIVSKYGFDRDK-YAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLN 420

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG--HA 412
            MI  Y QN +  EAL LF +M  + GL PN  T+ SV+ AC  S    +   +      
Sbjct: 421 TMIYSYAQNGFGREALELFERMINL-GLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRK 479

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            K+ L  D Y    ++DM  R GR+E ++ +  ++   D V W T+++ 
Sbjct: 480 DKIMLTNDHYA--CMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSA 526



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 11/226 (4%)

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   +L  C    +++  K I A  +++    ++  GS LVD   KCG + +AR++FD M
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGM 107

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P R+++TWN II  Y  H   +E +E+ + M++       V P+E T  ++F A S   +
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMIS-----NNVLPDEYTLSSVFKAFSDLSL 162

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHY-ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
             E     + +    G+E S     + +VD+  + GK  +A  +++ +  E D     + 
Sbjct: 163 EKEAQR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV-EEKDVVLITAL 220

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
           ++G  +  ++ E   + A    L+E    + Y   S + S   L D
Sbjct: 221 IVGYSQKGEDTE--AVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 264


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/642 (36%), Positives = 361/642 (56%), Gaps = 74/642 (11%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL-VDMYCNCREVECGRRVFDFISDK 348
           + AC  +  L   K++HA+ ++     DN+     L +    + R++     VFD + ++
Sbjct: 22  IKACKSMREL---KQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78

Query: 349 KIALWNAMITGYGQNEYDE-EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
               WN +I    + +    +AL++F +M   A + PN  T  SV+ AC       + + 
Sbjct: 79  NCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQ 138

Query: 408 IHGHAIKLGLGRDRYVQ------------------------------------------- 424
           +HG  +K GL  D +V                                            
Sbjct: 139 VHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFN 198

Query: 425 ----NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
               N ++D Y+R+G ++ ++ +FD M  R  VSWN MI+GY   G + +A+ +   M  
Sbjct: 199 VVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQ 258

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
           M +             VL   PN +TL++VLP    L  L  GK +H YA +N +  D V
Sbjct: 259 MGD-------------VL---PNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDV 302

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           +GSALVDMYAKCG +  A +VF+ +P  NVITWN +I    MHG+  ++   L  M   G
Sbjct: 303 LGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCG 362

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                + P++VT+IA+ +ACSH+G+V EG   F  M +  G++P  +HY C+VDLLGRAG
Sbjct: 363 -----ISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAG 417

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            +E+A +LI  MP + D    W +LLGA ++H+N++IG  AA+ L  + P  +  YV LS
Sbjct: 418 YLEEAEELILNMPMKPDDV-IWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALS 476

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N+Y+S+  WD    VR  MK+M +RK+PGCSWIE    IH+FL  D SH +++ +H  LE
Sbjct: 477 NMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLE 536

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            +S ++  EG++PDT+ VL  ++E+ KE++L  HSEK+A+AFG+++TPP T + + KNLR
Sbjct: 537 EISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLR 596

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C DCH + K ISK+  R+I++RD +RFHHF++G+CSC DYW
Sbjct: 597 ICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 205/432 (47%), Gaps = 67/432 (15%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV---YKVFDRI 140
           +KA   +++L   KQ+HA +VK G    +  +A  ++ +     SD  D+     VFD++
Sbjct: 22  IKACKSMREL---KQVHAFLVKTGQTHDN-AIATEILRL--SATSDFRDIGYALSVFDQL 75

Query: 141 TEKDQVSWNSMIATLCRFGKWDL-ALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            E++  +WN++I  L       L AL  F +M+  + VEP+ FT  SV  AC+ ++R   
Sbjct: 76  PERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMAR--- 132

Query: 199 LRLGRQVHGNSLRVG--------------------------------------------- 213
           L  G+QVHG  L+ G                                             
Sbjct: 133 LAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDE 192

Query: 214 ---EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-M 269
              E+N  + N ++  YA++G +  A+ LF     R +VSWN ++S  +QN  + EA+ +
Sbjct: 193 RGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEI 252

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
           F R M +  + P+ V++ SVLPA S L +L+ GK +H YA +N I ID+  +GSALVDMY
Sbjct: 253 FHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDD-VLGSALVDMY 311

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  +E   +VF+ +    +  WNA+I G   +    +      +ME+  G+ P+  T 
Sbjct: 312 AKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEK-CGISPSDVTY 370

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            +++ AC  +    +        +  +GL         ++D+  R G +E ++ +  +M 
Sbjct: 371 IAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMP 430

Query: 449 VR-DTVSWNTMI 459
           ++ D V W  ++
Sbjct: 431 MKPDDVIWKALL 442



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 155/313 (49%), Gaps = 60/313 (19%)

Query: 44  SWIESLRSEARS-NQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           +W   +R+ A + ++  +A+L + +M + + ++P+ F FP+VLKA A +  L+ GKQ+H 
Sbjct: 82  AWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHG 141

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGS--------------------------------- 128
            ++K+G       V N L+ MY  CGS                                 
Sbjct: 142 LLLKFGLVDDEFVVTN-LLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVV 200

Query: 129 ---DMWDVY----------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYS 174
               M D Y          ++FDR+ ++  VSWN MI+   + G +  A+E F RMM   
Sbjct: 201 LCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG 260

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTFIMNALMAMYAKL 230
           +V P+  TLVSV  A   +SR   L LG+ VH     N +R+ +    + +AL+ MYAK 
Sbjct: 261 DVLPNRVTLVSVLPA---ISRLGVLELGKWVHLYAEKNKIRIDD---VLGSALVDMYAKC 314

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G ++ A  +F+     ++++WN ++  L+ + K  +   +L +M   GI P  V+  ++L
Sbjct: 315 GSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAIL 374

Query: 291 PACSHLEMLDTGK 303
            ACSH  ++D G+
Sbjct: 375 SACSHAGLVDEGR 387



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 75/351 (21%)

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM--YSRMGRIEISKTIFDDMEVR 450
           VP     ++  + + +H   +K G   D  +   ++ +   S    I  + ++FD +  R
Sbjct: 19  VPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78

Query: 451 DTVSWNTMITGYT-ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           +  +WNT+I        +H DAL++  +M              L E  +  +PN  T  +
Sbjct: 79  NCFAWNTVIRALAETQDRHLDALLVFCQM--------------LSEATV--EPNQFTFPS 122

Query: 510 VLPGCGALSALAKGKEIHA-----------YAIRNMLATDVVVGS--------------- 543
           VL  C  ++ LA+GK++H            + + N+L   V+ GS               
Sbjct: 123 VLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGV 182

Query: 544 ---------------------ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
                                 +VD YA+ G L  AR +FD M  R+V++WNV+I  Y  
Sbjct: 183 DDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQ 242

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL-FYKMKDDYG 641
           +G  +E +E+   M+    + G+V PN VT +++  A S  G++  G  +  Y  K+   
Sbjct: 243 NGFYKEAIEIFHRMM----QMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIR 298

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           I+      + +VD+  + G +E A Q+   +P   +    W++++G   +H
Sbjct: 299 IDDVLG--SALVDMYAKCGSIEKAIQVFERLPQ--NNVITWNAVIGGLAMH 345


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/767 (32%), Positives = 423/767 (55%), Gaps = 32/767 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRS--DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           W   L   +RS +    ++       S  ++ P +     VL   A   +L+ GK +H +
Sbjct: 106 WNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGY 165

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G+ + +    N LV+MY KCG    D Y VFD I  KD VSWN+MIA L   G   
Sbjct: 166 VIKSGFEMDTFA-GNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLK 224

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIM 220
            A   F +M+  +V+P+  T+ ++   C++       R GRQ+H   L+  E   +  + 
Sbjct: 225 EAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVC 284

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGI 279
           NAL++ Y K+GR  +A++LF + + RDLVSWNTI++  + N ++L+++ +F   ++L  +
Sbjct: 285 NALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEML 344

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             D V++ S+LPAC+ L+ L  GK++HAY LR+  L +++  G+ALV  Y  C  +E   
Sbjct: 345 LLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAY 404

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             F  IS K +  WN+++  +G+  +    L L   M ++  + P++ T+ +++  C   
Sbjct: 405 HTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKL-DIRPDSVTILTIIHFCASL 463

Query: 400 EAFPDKEGIHGHAIKLG---LGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSW 455
                 + IHG++I+ G         V NA++D YS+ G IE +  +F ++ E R+ V+ 
Sbjct: 464 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTC 523

Query: 456 NTMITGYTICGQHGDALMLLREMQ--NMEEEKNRNNVY---DLDETVLR---------PK 501
           N++I+GY   G H DA M+   M   ++        VY   D  E  L           K
Sbjct: 524 NSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMK 583

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+ +T+M+++P C  ++++   ++ H Y IR+    D+ +   L+D YAKCG + +A ++
Sbjct: 584 PDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKI 642

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F     ++++ +  +I  Y MHG  ++ LE   +M+  G     +KP+ V F ++ +ACS
Sbjct: 643 FQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMG-----IKPDHVIFTSILSACS 697

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G ++EG+ +F  ++  +G++P+ + +ACVVDLL R G V +AY  +  +P E + A  
Sbjct: 698 HAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEAN-ANI 756

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLGAC+ +  VE+G I A  LF +E +   +Y++LSN+Y++   WD  M+VRK M+ 
Sbjct: 757 WGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRN 816

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
             ++K  GCSWIE     + F+ GD SH Q   ++  L  L +++++
Sbjct: 817 KDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVKE 863



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 182/629 (28%), Positives = 313/629 (49%), Gaps = 74/629 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD---IQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           +W  ++RS    ++  EA LS+      D    +PD+    A+LK+ + +   +LGK +H
Sbjct: 2   TWASTIRSLCVDSRHNEA-LSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           ++VVK G+    VT +  L+NMY KCG  + D +K+FD+    D V WN +++   R GK
Sbjct: 61  SYVVKQGHVSCHVT-SKALLNMYAKCGM-LDDCHKLFDQFGRCDPVIWNIVLSGYSRSGK 118

Query: 161 WDL-ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
            D   ++ FR M  S  V PSS T+ +V   C   +R   L  G+ VHG  ++ G E +T
Sbjct: 119 NDADVMKVFRAMHSSGEVMPSSVTIATVLPVC---ARSGNLNGGKSVHGYVIKSGFEMDT 175

Query: 218 FIMNALMAMYAKLGRVD-DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           F  NAL++MYAK G V  DA  +F S   +D+VSWN +++ L++N    EA      M  
Sbjct: 176 FAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK 235

Query: 277 RGIKPDGVSIASVLPACSHLE---MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
             +KP+  ++A++LP C+  +       G++IH+Y L+   L  +  V +AL+  Y    
Sbjct: 236 GSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVG 295

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
             +    +F  +  + +  WN +I GY  N    ++L +F  +  +  L  ++ TM S++
Sbjct: 296 RTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSIL 355

Query: 394 PACVRSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           PAC + +     + +H + ++   L  D    NAL+  Y++ G IE +   F  +  +D 
Sbjct: 356 PACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDL 415

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           +SWN+++  +     H   L LL  M  ++                  +P+S+T++T++ 
Sbjct: 416 ISWNSILDAFGEKRHHSRFLSLLHVMLKLD-----------------IRPDSVTILTIIH 458

Query: 513 GCGALSALAKGKEIHAYAIRN---MLATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVR 568
            C +L  + K KEIH Y+IR+   + AT   VG+A++D Y+KCG + +A ++F +L   R
Sbjct: 459 FCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKR 518

Query: 569 NVI-------------------------------TWNVIIMAYGMHGEGQEVLELLKNMV 597
           N++                               TWN+++  Y  +   ++ LEL   + 
Sbjct: 519 NLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQ 578

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            +G     +KP+ VT ++L   C+    V
Sbjct: 579 TQG-----MKPDVVTIMSLIPVCTQMASV 602



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 177/622 (28%), Positives = 306/622 (49%), Gaps = 57/622 (9%)

Query: 146 VSWNSMIATLCRFGKWDLALEAFRMMLYSNV--EPSSFTLVSVALACSNLSRRDGLRLGR 203
           ++W S I +LC   + + AL  F   L  +   +P    L ++  +CS L   +   LG+
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN---LGK 57

Query: 204 QVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
            +H   ++ G  +  + + AL+ MYAK G +DD   LF  F   D V WN ++S  S++ 
Sbjct: 58  CLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSG 117

Query: 263 KFLEAVM-FLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           K    VM   R M   G + P  V+IA+VLP C+    L+ GK +H Y +++   +D +F
Sbjct: 118 KNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD-TF 176

Query: 321 VGSALVDMYCNCREVEC-GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
            G+ALV MY  C  V C    VFD I  K +  WNAMI G  +N   +EA  LF  M + 
Sbjct: 177 AGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK- 235

Query: 380 AGLWPNATTMSSVVPACVR-SEAFPDKEG--IHGHAIKLG-LGRDRYVQNALMDMYSRMG 435
             + PN  T+++++P C    E    + G  IH + ++   L  D  V NAL+  Y ++G
Sbjct: 236 GSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVG 295

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
           R + ++++F  M+ RD VSWNT+I GY + G+   +L +              N+  L+ 
Sbjct: 296 RTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVF------------GNLVSLEM 343

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGC 554
            +L    +S+T++++LP C  L  L  GK++HAY +R+  L  D   G+ALV  YAKCG 
Sbjct: 344 LLL----DSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGY 399

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A   F ++  +++I+WN I+ A+G        L LL  M+       +++P+ VT +
Sbjct: 400 IEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKL-----DIRPDSVTIL 454

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC---------VVDLLGRAGKVEDA 665
            +   C+    V        K+K+ +G         C         ++D   + G +E A
Sbjct: 455 TIIHFCASLLRVK-------KVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYA 507

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
            ++   +  + +     S + G   +  + +   I +    + E D+ + + L+  +Y+ 
Sbjct: 508 NKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSG---MSETDLTT-WNLMVRVYAE 563

Query: 726 AQLWDKAMDVRKKMKEMGVRKE 747
               ++A+++  K++  G++ +
Sbjct: 564 NDCPEQALELFLKLQTQGMKPD 585



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 7/168 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R  A ++   +A+  ++++    ++PD     +++     +  + L +Q H ++
Sbjct: 553 TWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYI 612

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  +    + +  TL++ Y KCG   +  YK+F    +KD V + +MI      G  + 
Sbjct: 613 IRSSF--EDLHLKGTLLDAYAKCGIIGY-AYKIFQSSVDKDLVMFTAMIGGYAMHGMSEK 669

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLG---RQVHG 207
           ALE F  ML   ++P      S+  ACS+  R  +GL++     ++HG
Sbjct: 670 ALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHG 717


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/699 (34%), Positives = 390/699 (55%), Gaps = 66/699 (9%)

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IK 280
           +++  + +  R  DA+ +F     R    W   +S  ++  ++ + +    +M   G   
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+   +A+V+  C+ +  +++GK +H + LRN + +D   + +A++DMY  C + E  RR
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLD-VVLCNAVLDMYAKCGQFERARR 168

Query: 341 VFDFISDK-----KIAL--------------------------WNAMITGYGQNEYDEEA 369
           VF  ++++      IA+                          WN +I+G  ++ +  +A
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALM 428
           L    +M +   ++ + T  ++ V A +     PD    +HG  +   L  D +V+++LM
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGML--LLPDLGRQLHGRVLIAALEGDAFVRSSLM 286

Query: 429 DMYSRMGRIEISKTIFDDME--VRD-TVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           DMY + G +E + ++FD      RD   +W+TM+ GY   G+  +AL L R M       
Sbjct: 287 DMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRM------- 339

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                  L E V     +  TL +V   C  +  + +G+++H    +     D  + SA+
Sbjct: 340 -------LREGV---AADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAI 389

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           VDMYAKCG L  AR +FD    +N+  W  ++ +Y  HG+G+  +EL + M AE     +
Sbjct: 390 VDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAE-----K 444

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + PNE+T + + +ACSH G+VSEG   F +M+++YGI PS +HY C+VDL GR+G ++ A
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504

Query: 666 YQLI--NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
              I  N +  E   A  W +LL ACR+HQ+ E  ++A++ L  LE   A  YV+LSNIY
Sbjct: 505 KNFIEENNINHE---AIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIY 561

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           ++   W    ++R  M+E  VRK+PG SWI   + +H F+AGD SH QS +++ +LE L 
Sbjct: 562 ATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLV 621

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
           ER+++ GY   T  V+H+V +E++ET L  HSEKLAIAFGI++TP GT +R+ KNLRVC 
Sbjct: 622 ERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCE 681

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH+A K+IS    REI++RD+ RFHHFK+ +CSC D+W
Sbjct: 682 DCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 222/495 (44%), Gaps = 70/495 (14%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALAC 190
           D   VFD    +    W   I+   R G++   + AF  ML      P++F L +V   C
Sbjct: 63  DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           + +     +  G++VHG  LR G   +  + NA++ MYAK G+ + A+ +F +  +RD V
Sbjct: 123 AGMG---DVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAV 179

Query: 250 S-------------------------------WNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           S                               WNTI+S L ++    +A+  LR+MA  G
Sbjct: 180 SWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAG 239

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +  +  + ++       L + D G+++H   L    L  ++FV S+L+DMYC C  +E  
Sbjct: 240 VVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVL-IAALEGDAFVRSSLMDMYCKCGLLEAA 298

Query: 339 RRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
             VFD  S    D   A W+ M+ GY QN  +EEAL LF +M    G+  +  T++SV  
Sbjct: 299 ASVFDHWSPLTRDMNFA-WSTMVAGYVQNGREEEALDLFRRMLR-EGVAADRFTLTSVAA 356

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC           +HG   KL    D  + +A++DMY++ G +E +++IFD    ++   
Sbjct: 357 ACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAV 416

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W +M+  Y   GQ   A+ L   M                 T  +  PN ITL+ VL  C
Sbjct: 417 WTSMLCSYASHGQGRIAIELFERM-----------------TAEKMTPNEITLVGVLSAC 459

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFDLMPVRN 569
             +  +++G+       + M     +V S      +VD+Y + G L+ A+   +   + +
Sbjct: 460 SHVGLVSEGE----LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINH 515

Query: 570 -VITWNVIIMAYGMH 583
             I W  ++ A  +H
Sbjct: 516 EAIVWKTLLSACRLH 530



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 226/477 (47%), Gaps = 46/477 (9%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           TR    W  ++   AR  ++ + + ++ EM    +  P+ F   AV++  AG+ D+  GK
Sbjct: 73  TRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGK 132

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGS----------------------------- 128
           ++H  +++ G  L  V + N +++MY KCG                              
Sbjct: 133 RVHGWMLRNGVHLD-VVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQS 191

Query: 129 -DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+    ++FD    +D  SWN++I+ L R G    AL   R M  + V  + +T  +  
Sbjct: 192 GDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAF 251

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-- 244
           +    L   D   LGRQ+HG  L    E + F+ ++LM MY K G ++ A ++F  +   
Sbjct: 252 VLAGMLLLPD---LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPL 308

Query: 245 DRDL-VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            RD+  +W+T+V+   QN +  EA+   R+M   G+  D  ++ SV  AC+++ M++ G+
Sbjct: 309 TRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGR 368

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H    +    +D   + SA+VDMY  C  +E  R +FD    K IA+W +M+  Y  +
Sbjct: 369 QVHGCVEKLWYKLDAP-LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASH 427

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
                A+ LF +M     + PN  T+  V+ AC       + E ++   ++   G    +
Sbjct: 428 GQGRIAIELFERM-TAEKMTPNEITLVGVLSACSHVGLVSEGE-LYFKQMQEEYGIVPSI 485

Query: 424 Q--NALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLRE 477
           +  N ++D+Y R G ++ +K   ++  +  + + W T+++   +  QH +   L  E
Sbjct: 486 EHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL-HQHNEYAKLASE 541



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 174/356 (48%), Gaps = 25/356 (7%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL-SL 95
           S  R   SW   +    RS    +A+     M ++ +  +++ +      +AG+  L  L
Sbjct: 204 SPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAF-VLAGMLLLPDL 262

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIA 153
           G+Q+H  V+          V ++L++MY KCG       V+  +  +T     +W++M+A
Sbjct: 263 GRQLHGRVLIAALE-GDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVA 321

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
              + G+ + AL+ FR ML   V    FTL SVA AC+N+     +  GRQVHG   ++ 
Sbjct: 322 GYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGM---VEQGRQVHGCVEKL- 377

Query: 214 EWNTF---IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            W      + +A++ MYAK G ++DA+++F     +++  W +++ S + + +   A+  
Sbjct: 378 -WYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIEL 436

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMY 329
             +M    + P+ +++  VL ACSH+ ++  G E++   ++ +  I  S    + +VD+Y
Sbjct: 437 FERMTAEKMTPNEITLVGVLSACSHVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLY 495

Query: 330 CNCREVECGRRVFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKMEE 378
                ++   +  +FI +  I     +W  +++    +  NEY + A    +++E+
Sbjct: 496 GRSGLLD---KAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQ 548



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 16/228 (7%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L +G+     ++   LAT     ++++  + +    + AR VFD  P R    W + I  
Sbjct: 26  LLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISG 85

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
               G   + +     M+AE    GE  PN     A+   C+  G V  G  +   M  +
Sbjct: 86  CARRGRYADGMRAFAEMLAE----GEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN 141

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            G+         V+D+  + G+ E A ++   M      A +W+  +GAC     ++ G+
Sbjct: 142 -GVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAER--DAVSWNIAIGAC-----IQSGD 193

Query: 700 I-AAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           I  +  LF   P  D  S   ++S +  S    D A+   ++M + GV
Sbjct: 194 ILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD-ALSHLRRMAQAGV 240


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/576 (40%), Positives = 344/576 (59%), Gaps = 23/576 (3%)

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A AL   +   N    + L++ Y    ++   R+VFD + D+K+  WNAMI G  Q EY+
Sbjct: 13  AVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYN 72

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
           EE L LF +M  + G  P+  T+ SV        +    + IHG+AIK GL  D  V ++
Sbjct: 73  EEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSS 131

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN 486
           L  MY R G+++  + +   M VR+ V+WNT+I G    G     L L + M+       
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK------- 184

Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
                     +   +PN IT +TVL  C  L+   +G++IHA AI+   ++ V V S+L+
Sbjct: 185 ----------ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 234

Query: 547 DMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
            MY+KCGCL  A + F      + + W+ +I AYG HG+G E ++L  +M  +     E+
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQT----EM 290

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
           + NEV F+ L  ACSHSG+  +G++LF  M + YG +P   HY CVVDLLGRAG ++ A 
Sbjct: 291 EVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
            +I  MP + D    W +LL AC IH+N E+ +   + +  ++P+ ++ YVLL+N+++SA
Sbjct: 351 AIIKSMPIKPDPV-IWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASA 409

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           + W    +VRK M++  V+KE G SW E   E+H+F  GD S  +S++++ +L+ L+  M
Sbjct: 410 KRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 469

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           + +GY PDT+ VLH+++EEEKE+ L  HSEKLA+AF ++  P G  IR+ KNLRVC+DCH
Sbjct: 470 KLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCH 529

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            A K+IS I +REI LRD  RFHHF NG CSCGDYW
Sbjct: 530 VAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 183/414 (44%), Gaps = 35/414 (8%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           R+ + N    N L+  Y + G +  A+ +F    DR L +WN +++ L Q +   E +  
Sbjct: 19  RMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSL 78

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M   G  PD  ++ SV    + L  +  G++IH YA++  + +D   V S+L  MY 
Sbjct: 79  FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELD-LVVNSSLAHMYM 137

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +++ G  V   +  + +  WN +I G  QN   E  L L+ KM +++G  PN  T  
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFV 196

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +V+ +C         + IH  AIK+G      V ++L+ MYS+ G +  +   F + E  
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V W++MI+ Y   GQ  +A+ L   M    E                 + N +  + +
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTE----------------MEVNEVAFLNL 300

Query: 511 LPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L  C       KG E     +  Y  +  L     V    VD+  + GCL+ A  +   M
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIKSM 356

Query: 566 PVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           P++ + + W  ++ A  +H   +   ++ K ++       E+ PN+     L A
Sbjct: 357 PIKPDPVIWKTLLSACNIHKNAEMAQKVFKEIL-------EIDPNDSACYVLLA 403



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 185/366 (50%), Gaps = 21/366 (5%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           +N L+N Y + G D+    KVFD + ++   +WN+MIA L +F   +  L  FR M    
Sbjct: 28  SNILINGYVRAG-DLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLG 86

Query: 176 VEPSSFTLVSVALACSNLSRRDGLR---LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
             P  +TL SV       S   GLR   +G+Q+HG +++ G E +  + ++L  MY + G
Sbjct: 87  FSPDEYTLGSV------FSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNG 140

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMALRGIKPDGVSIASVL 290
           ++ D + + +S   R+LV+WNT++   +QN    E V++L + M + G +P+ ++  +VL
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVL 199

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +CS L +   G++IHA A++       + V S+L+ MY  C  +    + F    D+  
Sbjct: 200 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAFSEREDEDE 258

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK--EGI 408
            +W++MI+ YG +   +EA+ LF  M E   +  N     +++ AC  S    DK  E  
Sbjct: 259 VMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHS-GLKDKGLELF 317

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
                K G          ++D+  R G ++ ++ I   M ++ D V W T+++    C  
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSA---CNI 374

Query: 468 HGDALM 473
           H +A M
Sbjct: 375 HKNAEM 380



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 135/248 (54%), Gaps = 7/248 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E +  + EM      PD +   +V    AG++ +S+G+QIH + +KYG  L  V V ++L
Sbjct: 74  EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLV-VNSSL 132

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            +MY + G  + D   V   +  ++ V+WN++I    + G  +  L  ++MM  S   P+
Sbjct: 133 AHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
             T V+V  +CS+L+ R     G+Q+H  ++++G      ++++L++MY+K G + DA  
Sbjct: 192 KITFVTVLSSCSDLAIRGQ---GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLE 297
            F   ED D V W++++S+   + +  EA+     MA +  ++ + V+  ++L ACSH  
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSG 308

Query: 298 MLDTGKEI 305
           + D G E+
Sbjct: 309 LKDKGLEL 316



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 22/279 (7%)

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN------- 480
           M MYS++G +  +  +++ M  ++ +S N +I GY   G    A  +  EM +       
Sbjct: 1   MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60

Query: 481 ------MEEEKNRNNVYDLDET-VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
                 ++ E N   +    E   L   P+  TL +V  G   L +++ G++IH YAI+ 
Sbjct: 61  AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            L  D+VV S+L  MY + G L     V   MPVRN++ WN +IM    +G  + VL L 
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           K M   G R     PN++TF+ + ++CS   +  +G  + +      G        + ++
Sbjct: 181 KMMKISGCR-----PNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLI 234

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +  + G + DA +  +    E +    WSS++ A   H
Sbjct: 235 SMYSKCGCLGDAAKAFS--EREDEDEVMWSSMISAYGFH 271



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M  S  +P+   F  VL + + +     G+QIHA  +K G   S V V ++L++MY 
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA-SSVVAVVSSLISMYS 238

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTL 183
           KCG  + D  K F    ++D+V W+SMI+     G+ D A++ F  M   + +E +    
Sbjct: 239 KCGC-LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAF 297

Query: 184 VSVALACSNLSRRD-GLRL-GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           +++  ACS+   +D GL L    V     + G +  T +++ L     + G +D A+ + 
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL----GRAGCLDQAEAII 353

Query: 241 KSFEDR-DLVSWNTIVSS 257
           KS   + D V W T++S+
Sbjct: 354 KSMPIKPDPVIWKTLLSA 371


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 349/597 (58%), Gaps = 24/597 (4%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S++ A S    +     IHA  +++ +   + F+G  LV MY      E  +R+FD +
Sbjct: 122 VQSLVFAISSCTSVSYCSAIHARVIKS-LNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            +K +  WN++++G     Y    L  F +M   +G  PN  T+ SVV AC    A  + 
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +HG  +KLG+     V N+L++MY ++G ++ +  +F++M VR  VSWN+M+  +   
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G     + L   M+       R  +           P+  T++ +L  C       + + 
Sbjct: 301 GYAEKGMDLFNLMK-------RAGI----------NPDQATMVALLRACTDTGLGRQAES 343

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IHAY  R     D+++ +AL+++YAK G LN +  +F+ +  R+ I W  ++  Y +H  
Sbjct: 344 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 403

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G+E ++L   MV EG     V+ + VTF  L +ACSHSG+V EG   F  M + Y +EP 
Sbjct: 404 GREAIKLFDLMVKEG-----VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 458

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            DHY+C+VDLLGR+G++EDAY+LI  MP E   +G W +LLGACR++ NVE+G+  A+ L
Sbjct: 459 LDHYSCMVDLLGRSGRLEDAYELIKSMPME-PSSGVWGALLGACRVYGNVELGKEVAEQL 517

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             L+P    +Y++LSNIYS+A LW  A  VR  MKE  + + PGCS+IE G++IH+F+ G
Sbjct: 518 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 577

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H +S+++H  LE L  ++R+ G  P T  VLH+++EE K  ++  HSEKLAIAFG+L
Sbjct: 578 DQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 637

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            T  G  + + KNLR+C DCH   KF S +E R II+RD +RFHHF +G CSC DYW
Sbjct: 638 VTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 29/466 (6%)

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ 145
           A++    +S    IHA V+K     S   + + LV+MY K G D  D  ++FD +  KD 
Sbjct: 128 AISSCTSVSYCSAIHARVIK-SLNYSDGFIGDRLVSMYFKLGYDE-DAQRLFDEMPNKDL 185

Query: 146 VSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           VSWNS+++ L   G     L AF RM   S  +P+  TL+SV  AC+++   D    G+ 
Sbjct: 186 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE---GKS 242

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG  +++G      ++N+L+ MY KLG +D A  LF+    R LVSWN++V   + N  
Sbjct: 243 LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGY 302

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             + +     M   GI PD  ++ ++L AC+   +    + IHAY  R     D   + +
Sbjct: 303 AEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD-IIIAT 361

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           AL+++Y     +     +F+ I D+    W AM+ GY  +    EA+ LF  M +  G+ 
Sbjct: 362 ALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK-EGVE 420

Query: 384 PNATTMSSVVPACVRSEAFPDKEG---IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            +  T + ++ AC  S    + +    I     ++    D Y  + ++D+  R GR+E +
Sbjct: 421 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDA 478

Query: 441 KTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRN-----NVYDL- 493
             +   M +  +   W  ++    + G       +  ++ +++   +RN     N+Y   
Sbjct: 479 YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 538

Query: 494 ----DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
               D + +R       L T  PGC   S +  G +IH + + + L
Sbjct: 539 GLWRDASKVRALMKERRL-TRNPGC---SFIEHGNKIHRFVVGDQL 580



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 194/390 (49%), Gaps = 35/390 (8%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM--FLRQMA 275
           FI + L++MY KLG  +DA+ LF    ++DLVSWN+++S LS    +L A +  F R   
Sbjct: 155 FIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRG-YLGACLNAFCRMRT 213

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +P+ V++ SV+ AC+ +  LD GK +H   ++  +      V S L++MY     +
Sbjct: 214 ESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLGFL 272

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +   ++F+ +  + +  WN+M+  +  N Y E+ + LF  M+  AG+ P+  TM +++ A
Sbjct: 273 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AGINPDQATMVALLRA 331

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C  +      E IH +  + G   D  +  AL+++Y+++GR+  S+ IF++++ RD ++W
Sbjct: 332 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAW 391

Query: 456 NTMITGYTI--CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
             M+ GY +  CG+    L  L   + +E +                    +T   +L  
Sbjct: 392 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDH-------------------VTFTHLLSA 432

Query: 514 CGALSALAKGK---EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-N 569
           C     + +GK   EI +   R     D    S +VD+  + G L  A  +   MP+  +
Sbjct: 433 CSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPS 490

Query: 570 VITWNVIIMAYGMHGE---GQEVLELLKNM 596
              W  ++ A  ++G    G+EV E L ++
Sbjct: 491 SGVWGALLGACRVYGNVELGKEVAEQLLSL 520



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 166/350 (47%), Gaps = 36/350 (10%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S  QP+     +V+ A A +  L  GK +H  VVK G       V N+L+NMYGK G 
Sbjct: 213 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMS-GKAKVVNSLINMYGKLGF 271

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            +    ++F+ +  +  VSWNSM+      G  +  ++ F +M  + + P   T+V++  
Sbjct: 272 -LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 330

Query: 189 ACSNLSRRDGLRLGRQ---VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           AC++        LGRQ   +H    R G   +  I  AL+ +YAKLGR++ ++ +F+  +
Sbjct: 331 ACTDTG------LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 384

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK- 303
           DRD ++W  +++  + +    EA+     M   G++ D V+   +L ACSH  +++ GK 
Sbjct: 385 DRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 444

Query: 304 --EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG- 359
             EI +   R +  +D+    S +VD+      +E    +   +  +    +W A++   
Sbjct: 445 YFEIMSEVYRVEPRLDHY---SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 501

Query: 360 --YGQNEYDEEALMLFIKME--------------EVAGLWPNATTMSSVV 393
             YG  E  +E     + ++                AGLW +A+ + +++
Sbjct: 502 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALM 551


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/682 (34%), Positives = 388/682 (56%), Gaps = 28/682 (4%)

Query: 203 RQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           R VH N ++ G   +F+ + L+  Y K G + +A+ LF     R +V+WN+++SS   + 
Sbjct: 21  RAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHG 80

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
           K  EAV F   M + G+ PD  + +++  A S L ++  G+  H  A+   + + + FV 
Sbjct: 81  KSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVA 140

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           SALVDMY    ++     VF  + +K + L+ A+I GY Q+  D EAL +F  M    G+
Sbjct: 141 SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVN-RGV 199

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T++ ++  C       + + IHG  +K GL      Q +L+ MYSR   IE S  
Sbjct: 200 KPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIK 259

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F+ ++  + V+W + + G    G+   A+ + REM                       P
Sbjct: 260 VFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS-----------------ISP 302

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
           N  TL ++L  C +L+ L  G++IHA  ++  L  +   G+AL+++Y KCG ++ AR VF
Sbjct: 303 NPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D++   +V+  N +I AY  +G G E LEL + +   G     + PN VTFI++  AC++
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMG-----LVPNGVTFISILLACNN 417

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN-MMPPEFDKAGA 681
           +G+V EG  +F  +++++ IE + DH+ C++DLLGR+ ++E+A  LI  +  P+      
Sbjct: 418 AGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPD---VVL 474

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LL +C+IH  VE+ E     +  L P     ++LL+N+Y+SA  W++ ++++  +++
Sbjct: 475 WRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRD 534

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
           + ++K P  SW++   E+H F+AGD SH +S ++   L  L ++++  GY P+T  VL +
Sbjct: 535 LKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQD 594

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNT-PPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           ++EE+K + L  HSEKLAIA+ +  T    TTIR+ KNLRVC DCH   KF+S +  R+I
Sbjct: 595 LDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDI 654

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           I RD +RFHHFK G CSC DYW
Sbjct: 655 IARDSKRFHHFKGGLCSCKDYW 676



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 264/515 (51%), Gaps = 35/515 (6%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           NF + +++   A  + L+  + +H +V+K G+  S   + + L++ Y KCGS + +  K+
Sbjct: 2   NF-YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS--FLGHKLIDGYIKCGS-LAEARKL 57

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD +  +  V+WNSMI++    GK   A+E +  ML   V P ++T  +++ A S L   
Sbjct: 58  FDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGL- 116

Query: 197 DGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
             +R G++ HG ++ +G    + F+ +AL+ MYAK  ++ DA  +F+   ++D+V +  +
Sbjct: 117 --IRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTAL 174

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   +Q+    EA+     M  RG+KP+  ++A +L  C +L  L  G+ IH   +++ +
Sbjct: 175 IVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGL 234

Query: 315 LIDNSFVGS--ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
               S V S  +L+ MY  C  +E   +VF+ +       W + + G  QN  +E A+ +
Sbjct: 235 ---ESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSI 291

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M   + + PN  T+SS++ AC         E IH   +KLGL  ++Y   AL+++Y 
Sbjct: 292 FREMIRCS-ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYG 350

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G ++ ++++FD +   D V+ N+MI  Y   G   +AL L   ++NM           
Sbjct: 351 KCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMG---------- 400

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYA 550
                    PN +T +++L  C     + +G +I A +IRN    ++ +   + ++D+  
Sbjct: 401 -------LVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNIELTIDHFTCMIDLLG 452

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +   L  A  + + +   +V+ W  ++ +  +HGE
Sbjct: 453 RSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGE 487



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 227/448 (50%), Gaps = 23/448 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S     + +EA+  Y  M    + PD + F A+ KA + +  +  G++ H   
Sbjct: 68  TWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLA 127

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G  +    VA+ LV+MY K    M D + VF R+ EKD V + ++I    + G    
Sbjct: 128 VVLGLEVLDGFVASALVDMYAKF-DKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGE 186

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ F  M+   V+P+ +TL  + + C NL     L  G+ +HG  ++ G E       +
Sbjct: 187 ALKIFEDMVNRGVKPNEYTLACILINCGNLG---DLVNGQLIHGLVVKSGLESVVASQTS 243

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY++   ++D+  +F   +  + V+W + V  L QN +   AV   R+M    I P+
Sbjct: 244 LLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPN 303

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +++S+L ACS L ML+ G++IHA  ++   L  N + G+AL+++Y  C  ++  R VF
Sbjct: 304 PFTLSSILQACSSLAMLEVGEQIHAITMKLG-LDGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +++  +   N+MI  Y QN +  EAL LF +++ + GL PN  T  S++ AC  + A 
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNM-GLVPNGVTFISILLAC--NNAG 419

Query: 403 PDKEGI-------HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
             +EG        + H I+L +  D +    ++D+  R  R+E +  + +++   D V W
Sbjct: 420 LVEEGCQIFASIRNNHNIELTI--DHF--TCMIDLLGRSRRLEEAAMLIEEVRNPDVVLW 475

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEE 483
            T++     C  HG+  M  + M  + E
Sbjct: 476 RTLLNS---CKIHGEVEMAEKVMSKILE 500



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 186/357 (52%), Gaps = 33/357 (9%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT- 118
           EA+  + +M    ++P+ +    +L     + DL  G+ IH  VVK G  L SV  + T 
Sbjct: 186 EALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSG--LESVVASQTS 243

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L+ MY +C   + D  KVF+++   +QV+W S +  L + G+ ++A+  FR M+  ++ P
Sbjct: 244 LLTMYSRCNM-IEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISP 302

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           + FTL S+  ACS+L+    L +G Q+H  ++++G + N +   AL+ +Y K G +D A+
Sbjct: 303 NPFTLSSILQACSSLAM---LEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
           ++F    + D+V+ N+++ + +QN    EA+    ++   G+ P+GV+  S+L AC++  
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAG 419

Query: 298 MLDTGKEIHAYALRN----DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           +++ G +I A ++RN    ++ ID+    + ++D+    R +E    + + + +  + LW
Sbjct: 420 LVEEGCQIFA-SIRNNHNIELTIDHF---TCMIDLLGRSRRLEEAAMLIEEVRNPDVVLW 475

Query: 354 NAMITG---YGQNEYDEEAL--------------MLFIKMEEVAGLWPNATTMSSVV 393
             ++     +G+ E  E+ +              +L   +   AG W     M S +
Sbjct: 476 RTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTI 532


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/760 (32%), Positives = 428/760 (56%), Gaps = 60/760 (7%)

Query: 60  EAILSYIEMTRSDIQP--DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           +A+L Y  M R+   P  D++ F + LKA A  + L LGK +H HV++  +G SS  V N
Sbjct: 86  DALLFYARM-RASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFG-SSRIVYN 143

Query: 118 TLVNMYGKCGSDM------WD------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLAL 165
           +L+NMY  C +++      +D      V +VFD + +++ V+WN+MI+   +  +   A 
Sbjct: 144 SLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAF 203

Query: 166 EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW---NTFIMNA 222
           + FR M+   + P+  + V+V  A   +S  D   +   ++G  +++G     + F++++
Sbjct: 204 KMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANV---LYGLVVKLGSDFVDDFFVVSS 260

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKP 281
            + MYA+LG VD A+ +F    +R+   WNT++    QN+  +EA+ +F++ M       
Sbjct: 261 AIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVL 320

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V+  S L A S L+ L+ G+++HAY L++  ++    + +A++ MY  C  +    +V
Sbjct: 321 DDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQ-VVILNAIIVMYSRCGSIGTSFKV 379

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F  + ++ +  WN M++ + QN  D+E LML   M++  G   ++ T+++++       +
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQK-QGFMVDSVTLTALLSLASNLRS 438

Query: 402 FPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFD---DMEVRDTVSW 455
               +  H + I+ G+   G D Y    L+DMY++ G I  ++ +F+   D + RD  +W
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDSY----LIDMYAKSGLITTAQQLFEKNSDYD-RDEATW 493

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MI GYT  G   +   + R+M              +++ V   +PN++TL ++LP C 
Sbjct: 494 NAMIAGYTQNGLSEEGFAVFRKM--------------IEQNV---RPNAVTLASILPACN 536

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            +  +  GK+IH +AIR  L  +V VG+AL+DMY+K G + +A  VF     +N +T+  
Sbjct: 537 PMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTT 596

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I +YG HG G+  L L   M+  G     +KP+ VTF+A+ +ACS++G+V EG+ +F  
Sbjct: 597 MISSYGQHGMGERALSLFHAMLGSG-----IKPDSVTFVAILSACSYAGLVDEGLRIFQS 651

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M+ +Y I+PS +HY CV D+LGR G+V +AY+ +  +  E +  G W SLLGACRIH   
Sbjct: 652 MEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEF 711

Query: 696 EIGEIAAQNLFLLE--PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           E+G++ A  L  +E    +  ++VLLSNIY++   WD    VRK+M++ G+ KE GCSW+
Sbjct: 712 ELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWV 771

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           E    ++ F++ D  H Q  +++  LE L+  M+  GY P
Sbjct: 772 EVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 245/492 (49%), Gaps = 37/492 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++ +  EA   +  M R  I+P   +F  V  AV  + D      ++  V
Sbjct: 185 AWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLV 244

Query: 104 VKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VK G   +    V ++ + MY + G   +   ++FD   E++   WN+MI     + + +
Sbjct: 245 VKLGSDFVDDFFVVSSAIFMYAELGCVDF-AREIFDCCLERNTEVWNTMIGG---YVQNN 300

Query: 163 LALEAFRMMLYSNVEPSSFTL--VSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFI 219
             +EA  + +   +E   F L  V+   A + +S+   L LGRQ+H   L+        I
Sbjct: 301 CPIEAIDLFV-QVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVI 359

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           +NA++ MY++ G +  +  +F +  +RD+V+WNT+VS+  QN    E +M +  M  +G 
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGF 419

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
             D V++ ++L   S+L   + GK+ HAY +R+ I  +   + S L+DMY     +   +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDSYLIDMYAKSGLITTAQ 477

Query: 340 RVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
           ++F+  S  D+  A WNAMI GY QN   EE   +F KM E   + PNA T++S++PAC 
Sbjct: 478 QLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE-QNVRPNAVTLASILPACN 536

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                   + IHG AI+  L R+ +V  AL+DMYS+ G I  ++ +F +   +++V++ T
Sbjct: 537 PMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTT 596

Query: 458 MITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           MI+ Y   GQHG    AL L   M              L   +   KP+S+T + +L  C
Sbjct: 597 MISSY---GQHGMGERALSLFHAM--------------LGSGI---KPDSVTFVAILSAC 636

Query: 515 GALSALAKGKEI 526
                + +G  I
Sbjct: 637 SYAGLVDEGLRI 648



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 228/488 (46%), Gaps = 65/488 (13%)

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIA 287
           + G    A  LF S      V WNTI+     N+  ++A++F  +M A    K D  + +
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC-------------RE 334
           S L AC+    L  GK +H + LR+     +  V ++L++MY  C               
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSH-FGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
            +  RRVFD +  + +  WN MI+ Y + E   EA  +F  M  + G+ P   +  +V P
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-GIRPTPVSFVNVFP 226

Query: 395 ACVRSEAFPDKEGIHGHAIKLG--LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           A  R   + +   ++G  +KLG     D +V ++ + MY+ +G ++ ++ IFD    R+T
Sbjct: 227 AVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
             WNTMI GY       +A+ L   +Q ME E+     + LD+         +T ++ L 
Sbjct: 287 EVWNTMIGGYVQNNCPIEAIDLF--VQVMESEQ-----FVLDD---------VTFLSALT 330

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
               L  L  G+++HAY +++     VV+ +A++ MY++CG +  + +VF  M  R+V+T
Sbjct: 331 AISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVT 390

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS----------- 621
           WN ++ A+  +G   E L L+  M  +G        + VT  AL +  S           
Sbjct: 391 WNTMVSAFVQNGLDDEGLMLVFAMQKQG-----FMVDSVTLTALLSLASNLRSQEIGKQA 445

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+ ++  G+   ++  D Y           ++D+  ++G +  A QL      ++D+  A
Sbjct: 446 HAYLIRHGIQ--FEGMDSY-----------LIDMYAKSGLITTAQQLFE-KNSDYDRDEA 491

Query: 682 -WSSLLGA 688
            W++++  
Sbjct: 492 TWNAMIAG 499



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 3/163 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   +    ++    E    + +M   +++P+     ++L A   +  + LGKQI
Sbjct: 488 RDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQI 547

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   ++  +   +V V   L++MY K G+  +    VF    EK+ V++ +MI++  + G
Sbjct: 548 HGFAIR-CFLNRNVFVGTALLDMYSKSGAITY-AENVFAETLEKNSVTYTTMISSYGQHG 605

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRL 201
             + AL  F  ML S ++P S T V++  ACS     D GLR+
Sbjct: 606 MGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/688 (34%), Positives = 383/688 (55%), Gaps = 26/688 (3%)

Query: 202 GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            + +HG+ ++ G   + F+  +L+ +Y + G   DA+ LF    ++++V+W  +++  + 
Sbjct: 97  AKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTL 156

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N + + A+    +M   G  P   ++  +L AC     +D GK++H Y ++       S 
Sbjct: 157 NSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITS- 215

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEV 379
           +G++L  +Y     +E G R F  I DK +  W  MI+   ++E Y E  L LF+ M + 
Sbjct: 216 IGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLK- 274

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + PN  T++SV+  C  S      + + G   K+G   +  V+N+ M +Y R G  E 
Sbjct: 275 GEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEE 334

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +F++ME    ++WN MI+G+        A ++     ++           +   ++R
Sbjct: 335 AMRLFEEMEDNSVITWNAMISGF--------AQIMDSAKDDLHARSRGFQALKIFRDLVR 386

Query: 500 P--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KP+  T  ++L  C  + AL +G++IHA  I+    +DVVV SALV+MY KCGC+ +
Sbjct: 387 SAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEY 446

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A + F  MP R ++TW  +I  Y  HG   + ++L ++M+  G+     KPNE+TF++L 
Sbjct: 447 ATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGA-----KPNEITFVSLL 501

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACS++G+V E M  F  M+++Y IEP  DHY C++D+  R G+++DAY  I     E +
Sbjct: 502 SACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPN 561

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
           +A  WSSL+  CR H N+E+   AA  L  L+P V   YVLL N+Y S   W     VRK
Sbjct: 562 EA-IWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRK 620

Query: 738 --KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
             K +++G+ ++   SWI   D+++ F A D SH QS +L+  LE L E+ +  GY P  
Sbjct: 621 LSKHEDLGILRDR--SWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQ 678

Query: 796 SCVLHNVNEEEKETL--LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           +  L++  E+ K     L  HSE+LA+A G+L  PPG T+R+ KN+ +C DCH + KF S
Sbjct: 679 NTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFS 738

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDY 881
            + +REI++RD +R H FK+G CSCGD+
Sbjct: 739 LLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 219/453 (48%), Gaps = 47/453 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +     ++Q   A+  ++EM +    P ++    +L A     ++ LGKQ+H + 
Sbjct: 146 TWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYT 205

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-D 162
           +KYG   S  ++ N+L  +Y K G ++    + F RI +K+ ++W +MI+       + +
Sbjct: 206 IKYG-AASITSIGNSLCRLYTKSG-NLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           L L  F  ML   V P+ FTL SV   C        + LG+QV G   ++G   N  + N
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGT---SLDMNLGKQVQGFCFKIGCATNLPVKN 320

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ-----------NDKFLEAVMF 270
           + M +Y + G  ++A  LF+  ED  +++WN ++S  +Q             +  +A+  
Sbjct: 321 STMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R +    +KPD  + +S+L  CS +  L+ G++IHA  ++   L D   V SALV+MY 
Sbjct: 381 FRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSD-VVVNSALVNMYN 439

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +E   + F  +  + +  W +MI+GY Q+    +A+ LF  M  +AG  PN  T  
Sbjct: 440 KCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDM-ILAGAKPNEITFV 498

Query: 391 SVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALM-------DMYSRMGRIE---- 438
           S++ AC  +       G+   A++   + ++ Y    LM       DM+ R+GR++    
Sbjct: 499 SLLSACSYA-------GLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYA 551

Query: 439 -ISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            I +  F+  E      W++++ G   C  HG+
Sbjct: 552 FIKRKGFEPNE----AIWSSLVAG---CRSHGN 577



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 21/228 (9%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C+ + +    + +HGH +K G   D +V  +L+++Y R G  + ++ +FD+M  ++ V+W
Sbjct: 88  CIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTW 147

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             +ITGYT+  Q   AL +  EM                   L   P+  TL  +L  C 
Sbjct: 148 TALITGYTLNSQPVLALEVFVEMLK-----------------LGRYPSDYTLGGMLSACV 190

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           A   +  GK++H Y I+   A+   +G++L  +Y K G L    R F  +P +NVITW  
Sbjct: 191 ASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTT 250

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
           +I A     E +   EL  N+  +  + GEV PNE T  ++ + C  S
Sbjct: 251 MISAC---AEDENYTELGLNLFLDMLK-GEVMPNEFTLTSVMSLCGTS 294



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 20/253 (7%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            S   + +L  C    +L   K +H + ++     D+ V ++LV++Y +CG    AR +F
Sbjct: 77  QSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLF 136

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D MP +NV+TW  +I  Y ++ +    LE+   M+  G       P++ T   + +AC  
Sbjct: 137 DEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRY-----PSDYTLGGMLSACVA 191

Query: 623 SGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           S  +  G  +  Y +K  YG          +  L  ++G +E   +    +P +      
Sbjct: 192 SHNIDLGKQVHGYTIK--YGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDK--NVIT 247

Query: 682 WSSLLGACRIHQN-VEIGEIAAQNLFL--LEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
           W++++ AC   +N  E+G     NLFL  L+ +V  +   L+++ S   L   ++D+   
Sbjct: 248 WTTMISACAEDENYTELG----LNLFLDMLKGEVMPNEFTLTSVMS---LCGTSLDMNLG 300

Query: 739 MKEMGVRKEPGCS 751
            +  G   + GC+
Sbjct: 301 KQVQGFCFKIGCA 313


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 349/597 (58%), Gaps = 24/597 (4%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S++ A S    +     IHA  +++ +   + F+G  LV MY      E  +R+FD +
Sbjct: 65  VQSLVFAISSCTSVSYCSAIHARVIKS-LNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            +K +  WN++++G     Y    L  F +M   +G  PN  T+ SVV AC    A  + 
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +HG  +KLG+     V N+L++MY ++G ++ +  +F++M VR  VSWN+M+  +   
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G     + L   M+       R  +           P+  T++ +L  C       + + 
Sbjct: 244 GYAEKGMDLFNLMK-------RAGI----------NPDQATMVALLRACTDTGLGRQAES 286

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IHAY  R     D+++ +AL+++YAK G LN +  +F+ +  R+ I W  ++  Y +H  
Sbjct: 287 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
           G+E ++L   MV EG     V+ + VTF  L +ACSHSG+V EG   F  M + Y +EP 
Sbjct: 347 GREAIKLFDLMVKEG-----VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPR 401

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
            DHY+C+VDLLGR+G++EDAY+LI  MP E   +G W +LLGACR++ NVE+G+  A+ L
Sbjct: 402 LDHYSCMVDLLGRSGRLEDAYELIKSMPME-PSSGVWGALLGACRVYGNVELGKEVAEQL 460

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             L+P    +Y++LSNIYS+A LW  A  VR  MKE  + + PGCS+IE G++IH+F+ G
Sbjct: 461 LSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVG 520

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D  H +S+++H  LE L  ++R+ G  P T  VLH+++EE K  ++  HSEKLAIAFG+L
Sbjct: 521 DQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 580

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            T  G  + + KNLR+C DCH   KF S +E R II+RD +RFHHF +G CSC DYW
Sbjct: 581 VTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 29/466 (6%)

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ 145
           A++    +S    IHA V+K     S   + + LV+MY K G D  D  ++FD +  KD 
Sbjct: 71  AISSCTSVSYCSAIHARVIK-SLNYSDGFIGDRLVSMYFKLGYDE-DAQRLFDEMPNKDL 128

Query: 146 VSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           VSWNS+++ L   G     L AF RM   S  +P+  TL+SV  AC+++   D    G+ 
Sbjct: 129 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE---GKS 185

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG  +++G      ++N+L+ MY KLG +D A  LF+    R LVSWN++V   + N  
Sbjct: 186 LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGY 245

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             + +     M   GI PD  ++ ++L AC+   +    + IHAY  R     D   + +
Sbjct: 246 AEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD-IIIAT 304

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           AL+++Y     +     +F+ I D+    W AM+ GY  +    EA+ LF  M +  G+ 
Sbjct: 305 ALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK-EGVE 363

Query: 384 PNATTMSSVVPACVRSEAFPDKEG---IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            +  T + ++ AC  S    + +    I     ++    D Y  + ++D+  R GR+E +
Sbjct: 364 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDA 421

Query: 441 KTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRN-----NVYDL- 493
             +   M +  +   W  ++    + G       +  ++ +++   +RN     N+Y   
Sbjct: 422 YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 481

Query: 494 ----DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
               D + +R       L T  PGC   S +  G +IH + + + L
Sbjct: 482 GLWRDASKVRALMKERRL-TRNPGC---SFIEHGNKIHRFVVGDQL 523



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 195/392 (49%), Gaps = 35/392 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM--FLRQ 273
           + FI + L++MY KLG  +DA+ LF    ++DLVSWN+++S LS    +L A +  F R 
Sbjct: 96  DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRG-YLGACLNAFCRM 154

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
               G +P+ V++ SV+ AC+ +  LD GK +H   ++  +      V S L++MY    
Sbjct: 155 RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLG 213

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++   ++F+ +  + +  WN+M+  +  N Y E+ + LF  M+  AG+ P+  TM +++
Sbjct: 214 FLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AGINPDQATMVALL 272

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC  +      E IH +  + G   D  +  AL+++Y+++GR+  S+ IF++++ RD +
Sbjct: 273 RACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRI 332

Query: 454 SWNTMITGYTI--CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
           +W  M+ GY +  CG+    L  L   + +E                    + +T   +L
Sbjct: 333 AWTAMLAGYAVHACGREAIKLFDLMVKEGVE-------------------VDHVTFTHLL 373

Query: 512 PGCGALSALAKGK---EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
             C     + +GK   EI +   R     D    S +VD+  + G L  A  +   MP+ 
Sbjct: 374 SACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPME 431

Query: 569 -NVITWNVIIMAYGMHGE---GQEVLELLKNM 596
            +   W  ++ A  ++G    G+EV E L ++
Sbjct: 432 PSSGVWGALLGACRVYGNVELGKEVAEQLLSL 463



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 166/350 (47%), Gaps = 36/350 (10%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S  QP+     +V+ A A +  L  GK +H  VVK G       V N+L+NMYGK G 
Sbjct: 156 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMS-GKAKVVNSLINMYGKLGF 214

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            +    ++F+ +  +  VSWNSM+      G  +  ++ F +M  + + P   T+V++  
Sbjct: 215 -LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 273

Query: 189 ACSNLSRRDGLRLGRQ---VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           AC++        LGRQ   +H    R G   +  I  AL+ +YAKLGR++ ++ +F+  +
Sbjct: 274 ACTDTG------LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 327

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK- 303
           DRD ++W  +++  + +    EA+     M   G++ D V+   +L ACSH  +++ GK 
Sbjct: 328 DRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 387

Query: 304 --EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG- 359
             EI +   R +  +D+    S +VD+      +E    +   +  +    +W A++   
Sbjct: 388 YFEIMSEVYRVEPRLDHY---SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 444

Query: 360 --YGQNEYDEEA--------------LMLFIKMEEVAGLWPNATTMSSVV 393
             YG  E  +E                ++   +   AGLW +A+ + +++
Sbjct: 445 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALM 494


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/759 (33%), Positives = 416/759 (54%), Gaps = 42/759 (5%)

Query: 23  QPPATTATSLPLPGSQTRCKESWIESLRSEARS-NQFREAILSYIEMTRSDIQPDNFAFP 81
           Q P +  +         R    W   +R+ + + N   +   +Y  M R  +Q D+  FP
Sbjct: 104 QHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFP 163

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT 141
            VLK  +   D+  G ++H  V K G+  + V V NTL+ +YG CG  + D  ++FD + 
Sbjct: 164 FVLKLCSDSFDICKGMEVHGVVFKLGFD-TDVYVGNTLLMLYGNCGF-LNDARRLFDEMP 221

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEA-FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
           E+D VSWN++I  L   G +  A    F M+L S ++P+  +++S+    + L   +   
Sbjct: 222 ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEE--- 278

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           + R++H  S++VG +      NAL+  Y K G V     +F    +++ VSWN+I++ L+
Sbjct: 279 MTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLA 338

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
              +  +A+   R M   G +P+ V+I+S+LP    LE    GKEIH +++R     D  
Sbjct: 339 CKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETD-I 397

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           F+ ++L+DMY           +F  +  + I  WNAMI  Y  N    EA+   I+M+E 
Sbjct: 398 FIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQE- 456

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G  PNA T ++V+PAC R       + IH   +++GL  D +V N+L+DMY++ G +  
Sbjct: 457 TGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHS 516

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           ++ +F+    +D VS+N +I GY+       +L L  EM+                 +L 
Sbjct: 517 ARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMR-----------------LLG 558

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            KP+ ++ + V+  C  L+AL +GKE+H  A+RN L + + V ++L+D Y KCG ++ A 
Sbjct: 559 KKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIAC 618

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           R+F+ +  ++V +WN +I+ YGM GE +  + + + M     R   V+ + V++IA+ +A
Sbjct: 619 RLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM-----RDDTVQYDLVSYIAVLSA 673

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH G+V  G   F +M     +EP+  HY C+VDLLGRAG VE+A +LI  +P   D A
Sbjct: 674 CSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPD-A 731

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LLGACRI+ NVE+G  AA++LF L+P    +Y+LLSNIY+    WD+A  +R+ M
Sbjct: 732 NIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELM 791

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           K  G +K PGCSW++  D++H F+A        E++ GF
Sbjct: 792 KSRGAKKNPGCSWVQIYDQVHAFVA-------EERVEGF 823



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 181/617 (29%), Positives = 316/617 (51%), Gaps = 53/617 (8%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L   + +Q L   KQ+HA  +  G+   SV++  +L+  Y K          +F++  +
Sbjct: 60  LLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKF-QHPGSFCSLFNQTFQ 118

Query: 143 KDQVS--WNSMIA--TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
             + +  WN++I   ++   G +D   E +  M+   V+    T   V   CS+      
Sbjct: 119 NCRTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSD---SFD 174

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           +  G +VHG   ++G + + ++ N L+ +Y   G ++DA+ LF    +RD+VSWNTI+  
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGL 234

Query: 258 LSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           LS N  + EA  +   M LR  IKP+ VS+ S+LP  + LE  +  + IH Y+++  + +
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVK--VGL 292

Query: 317 DNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           D+     +ALVD Y  C  V+   +VF+   +K    WN++I G        +AL  F  
Sbjct: 293 DSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRM 352

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M + AG  PN+ T+SS++P  V  E F   + IHG ++++G   D ++ N+L+DMY++ G
Sbjct: 353 MID-AGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSG 411

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
               + TIF +++ R+ VSWN MI  Y +     +A+  + +MQ   E            
Sbjct: 412 HSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGE------------ 459

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                 PN++T   VLP C  L  L  GKEIHA  +R  L +D+ V ++L+DMYAKCGCL
Sbjct: 460 -----CPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 514

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + AR VF+    ++ +++N++I+ Y    +  + L L   M   G      KP+ V+F+ 
Sbjct: 515 HSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-----KPDVVSFVG 568

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA------CVVDLLGRAGKVEDAYQLI 669
           + +AC++   + +G       K+ +G+      Y+       ++D   + G+++ A +L 
Sbjct: 569 VISACANLAALKQG-------KEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 621

Query: 670 NMMPPEFDKAGAWSSLL 686
           N +   F    +W++++
Sbjct: 622 NQIL--FKDVASWNTMI 636


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/670 (38%), Positives = 368/670 (54%), Gaps = 67/670 (10%)

Query: 223 LMAMYAKLGRVDDAKTLFKSF--------EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           L+ +Y+KLG +  A+TLF           +  +    NT++ + +   +  EA+     M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G+  +  +   VL  C+       G+ +H   +R     D  FV +ALVDMY  C E
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSD-LFVEAALVDMYAKCGE 182

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     VFD +  + +  W AMIT Y Q E   +ALMLF KM+E  G   +  T  SV  
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQE-EGFLGDEITAISVAS 241

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A                  +LG GR                 I  ++ +FD ME R+ +S
Sbjct: 242 A----------------VGQLGDGR---------------MAISRARLVFDRMEERNGIS 270

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN+M++GYT  G+  DAL L  +MQ  E +                 PN +T + ++  C
Sbjct: 271 WNSMLSGYTQNGRPTDALSLFNQMQASECD-----------------PNPVTALIMVSAC 313

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV--RNVIT 572
             L +   G+++H + I + +  D  + +A++DMY KCG L+ A  +F+   +  R+V +
Sbjct: 314 SYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSS 373

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WNV+I  YG+HG G+E LEL   M  EG     V+PN++TF ++ +ACSH+G++ EG   
Sbjct: 374 WNVLISGYGVHGHGKEALELFSRMQVEG-----VEPNDITFTSILSACSHAGLIDEGRKC 428

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F  M     + P   HYAC+VD+LGRAG + +A++LI  +P        W +LL ACRIH
Sbjct: 429 FADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE-VWGALLLACRIH 486

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            N E+GEIAA NLF LEP+   +YVL+SNIY+++  W +   VR+ MK  G++K    S 
Sbjct: 487 GNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 546

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           IEFG E+H F   D S     +++  +E+L+  M+  GYVPD SCVLH+V  E+KE LL 
Sbjct: 547 IEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLN 606

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AFGI+    G  I+V KNLRVC+DCH A KFIS I  R+II+RD  RFHHF+
Sbjct: 607 YHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQ 666

Query: 873 NGTCSCGDYW 882
            G CSCGDYW
Sbjct: 667 GGRCSCGDYW 676



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 203/426 (47%), Gaps = 45/426 (10%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR+ A + +  EAI  YI M R  +  +NF +P VLK  A       G+ +H  VV+ G+
Sbjct: 104 LRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGF 163

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           G S + V   LV+MY KCG ++ D ++VFDR+  +D V W +MI    +  +   AL  F
Sbjct: 164 G-SDLFVEAALVDMYAKCG-EIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
           R M          T +SVA A   L        GR                         
Sbjct: 222 RKMQEEGFLGDEITAISVASAVGQLGD------GRMA----------------------- 252

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
               +  A+ +F   E+R+ +SWN+++S  +QN +  +A+    QM      P+ V+   
Sbjct: 253 ----ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALI 308

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--IS 346
           ++ ACS+L     G+++H + + + + ID + + +A++DMY  C +++    +F+   + 
Sbjct: 309 MVSACSYLGSKHLGRKLHNFVISSKMDIDTT-LRNAIMDMYMKCGDLDTAVEMFNNCELG 367

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++ ++ WN +I+GYG + + +EAL LF +M +V G+ PN  T +S++ AC  +    +  
Sbjct: 368 ERDVSSWNVLISGYGVHGHGKEALELFSRM-QVEGVEPNDITFTSILSACSHAGLIDEGR 426

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR--DTVSWNTMITGYTI 464
                  KL +  +      ++DM  R G +  +  +   +  R  D V W  ++     
Sbjct: 427 KCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLA--- 482

Query: 465 CGQHGD 470
           C  HG+
Sbjct: 483 CRIHGN 488



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 218/504 (43%), Gaps = 66/504 (13%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--------ITEKD 144
           L+  K IH+ +   G+ L +      L+ +Y K G D+     +FD             +
Sbjct: 38  LTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLG-DLHSARTLFDHRHHHHHGHTQAPN 96

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
               N+M+      G+   A++ +  M    V  ++FT   V   C++     G   G  
Sbjct: 97  SFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS---ELGAVFGEV 153

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           VHG  +R G   + F+  AL+ MYAK G + DA  +F     RD+V W  +++   Q ++
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
            L+A+M  R+M   G   D ++  SV  A   L     G+                    
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQL---GDGR-------------------- 250

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
                      +   R VFD + ++    WN+M++GY QN    +AL LF +M + +   
Sbjct: 251 ---------MAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQM-QASECD 300

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           PN  T   +V AC    +      +H   I   +  D  ++NA+MDMY + G ++ +  +
Sbjct: 301 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 360

Query: 444 FDDMEV--RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           F++ E+  RD  SWN +I+GY + G   +AL L   MQ                 V   +
Sbjct: 361 FNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ-----------------VEGVE 403

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN IT  ++L  C     + +G++  A   +  +  ++   + +VDM  + G LN A R+
Sbjct: 404 PNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRL 463

Query: 562 FDLMPVR-NVITWNVIIMAYGMHG 584
              +P R +   W  +++A  +HG
Sbjct: 464 IKKIPSRPSDEVWGALLLACRIHG 487



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 191/470 (40%), Gaps = 71/470 (15%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C+ L  L   K IH+       L+      + L+ +Y    ++   R +FD     
Sbjct: 31  LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 349 KIA--------LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
                      L N M+  Y       EA+ L+I M+ + G+  N  T   V+  C    
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM-GVGVNNFTYPFVLKVCASEL 146

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                E +HG  ++ G G D +V+ AL+DMY++ G I  +  +FD M +RD V W  MIT
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y    +   ALML R+MQ              +E  L                      
Sbjct: 207 LYEQAERPLKALMLFRKMQ--------------EEGFL---------------------- 230

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G EI          T + V SA+  +      ++ AR VFD M  RN I+WN ++  Y
Sbjct: 231 --GDEI----------TAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGY 278

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDD 639
             +G   + L L   M A      E  PN VT + + +ACS+ G    G  L  + +   
Sbjct: 279 TQNGRPTDALSLFNQMQAS-----ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 333

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH-QNVEIG 698
             I+ +  +   ++D+  + G ++ A ++ N          +W+ L+    +H    E  
Sbjct: 334 MDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 391

Query: 699 EIAAQ-NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           E+ ++  +  +EP+  +   +LS   S A L D+       M ++ VR E
Sbjct: 392 ELFSRMQVEGVEPNDITFTSILSAC-SHAGLIDEGRKCFADMTKLSVRPE 440



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 8/206 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    ++ +  +A+  + +M  S+  P+      ++ A + +    LG+++H  V
Sbjct: 270 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 329

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKW 161
           +     + + T+ N +++MY KCG D+    ++F+   + E+D  SWN +I+     G  
Sbjct: 330 ISSKMDIDT-TLRNAIMDMYMKCG-DLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHG 387

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
             ALE F  M    VEP+  T  S+  ACS+    D    GR+   +  ++         
Sbjct: 388 KEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE---GRKCFADMTKLSVRPEMKHY 444

Query: 222 ALMA-MYAKLGRVDDAKTLFKSFEDR 246
           A M  M  + G +++A  L K    R
Sbjct: 445 ACMVDMLGRAGFLNEAFRLIKKIPSR 470


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/689 (36%), Positives = 376/689 (54%), Gaps = 62/689 (8%)

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +A + K  R+D A+ +F      +L  +  +++  ++ND+  +A+    +M++R    D 
Sbjct: 19  LANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DV 74

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           VS  S++  C     LD G    A  L +++   N    + +V+ Y     VE  +R+F 
Sbjct: 75  VSWNSMIKGC-----LDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFL 129

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKM---------------------EEV--- 379
            +  K +A WNAM+ GY +N   EE + LF +M                     EE    
Sbjct: 130 DMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFV 189

Query: 380 ------AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
                 +G+ P  +T + V+ AC  +  F     +HGH +KLG     ++  +L+  Y+ 
Sbjct: 190 FKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYAN 249

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
             +IE +  IF++   ++ V W  ++T Y    +H DAL +  +M  M            
Sbjct: 250 CMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMG----------- 298

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                   PN  T    L  C  L AL KGKEIH  AI+  L TDV VG++LV MY +CG
Sbjct: 299 ------ALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECG 352

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +N A  VF  +  +++++WN II+    HG G   L     M+  G     V PNE+TF
Sbjct: 353 NVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRG-----VDPNEITF 407

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
             L +ACS SGM+ +G   F  +         P HYAC+VD+LGR GK+++A +L+  MP
Sbjct: 408 TGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMP 467

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            + +    W +LL ACR+H N+E+ E AA+++  LEP+ +S YVLLSNIY+SA  W    
Sbjct: 468 VKANSM-IWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVS 526

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            +R KMK+ G+ K+PG SW+    + H+FL+ D SH  SE+++  L+ L +++++ GYVP
Sbjct: 527 RMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVP 586

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           D    LH+V +E+KE +L  HSE+LAIAFG+++T  G+TI V KNLRVC DCH   K +S
Sbjct: 587 DQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMS 646

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KI  R+I++RD  RFHHFKNG CSC DYW
Sbjct: 647 KIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 203/487 (41%), Gaps = 97/487 (19%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  K+FDR++ +D VSWNSMI      G   +A   F  M   NV               
Sbjct: 61  DALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVIS------------- 107

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                                  W T +       Y K GRV+ A+ LF     +D+ +W
Sbjct: 108 -----------------------WTTMVNG-----YLKFGRVELAQRLFLDMHVKDVAAW 139

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALR-------------------------------GIK 280
           N +V    +N +  E V    +M +R                               G++
Sbjct: 140 NAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVE 199

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P   + A VL AC++    + G ++H + ++      + F+  +L+  Y NC ++E   +
Sbjct: 200 PTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFF-HEFISVSLITFYANCMKIEHAHK 258

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F+    K +  W A++T Y  N   ++AL +F  M ++  L PN +T S  + AC   E
Sbjct: 259 IFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGAL-PNQSTFSITLKACCGLE 317

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + IH  AIKLGL  D +V N+L+ MY+  G +  +  +F ++  +D VSWN++I 
Sbjct: 318 ALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIV 377

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G     QHG  L  L     M     R  V           PN IT   +L  C     L
Sbjct: 378 G---SAQHGFGLWALIFFNQMI----RRGV----------DPNEITFTGLLSACSRSGML 420

Query: 521 AKGKEIHAYAIR---NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            KG+    Y  R   N+L       + +VD+  +CG L+ A  +   MPV+ N + W  +
Sbjct: 421 LKGRCFFEYISRYKSNVLRPQHY--ACMVDILGRCGKLDEAEELVRYMPVKANSMIWLAL 478

Query: 577 IMAYGMH 583
           + A  +H
Sbjct: 479 LSACRVH 485



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 159/320 (49%), Gaps = 11/320 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +  EA+  + +M RS ++P    F  VL A A   + +LG Q+H HV
Sbjct: 169 SWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHV 228

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G       ++ +L+  Y  C   +   +K+F+    K+ V W +++       K   
Sbjct: 229 VKLGCFFHEF-ISVSLITFYANC-MKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQD 286

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M      P+  T      AC  L   + L  G+++H  ++++G E + F+ N+
Sbjct: 287 ALRVFGDMTKMGALPNQSTFSITLKACCGL---EALDKGKEIHTMAIKLGLETDVFVGNS 343

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY + G V+ A  +F++  ++D+VSWN+I+   +Q+   L A++F  QM  RG+ P+
Sbjct: 344 LVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPN 403

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCNCREVECGRR 340
            ++   +L ACS   ML  G+    Y  R  +++L    +  + +VD+   C +++    
Sbjct: 404 EITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHY--ACMVDILGRCGKLDEAEE 461

Query: 341 VFDFISDKKIAL-WNAMITG 359
           +  ++  K  ++ W A+++ 
Sbjct: 462 LVRYMPVKANSMIWLALLSA 481


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 264/781 (33%), Positives = 410/781 (52%), Gaps = 58/781 (7%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           + +++ Y K G ++    ++FD   E+  V+W +MI    +  ++  A + F  M  S  
Sbjct: 78  DIIISGYVKSG-NLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGS 136

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDD 235
           +P   T +++   C++L     L    Q H   +++G   N  + N L+  Y K G +D 
Sbjct: 137 QPDYVTYITLLTGCNDLEVAKELY---QAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDS 193

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ LF      D VS+N +++  + N    EA+    +M   G KP   + A+V+ A   
Sbjct: 194 ARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVG 253

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L+    G++IH + ++    I N FVG+A +D Y     V   R++F+ + +     +N 
Sbjct: 254 LDDTAFGQQIHGFVVKTS-FIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNV 312

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           +IT Y      +E++ LF +++         TT         ++  FP    I   ++ L
Sbjct: 313 IITAYAWVGKVKESIDLFQELQ--------FTTFDR------KNFPFPTMLSIAASSLDL 358

Query: 416 GLGR-------------DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            +GR             D  V N+L+DMY++ G+ E +  IF  +  R TV W  MI+  
Sbjct: 359 QMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISAN 418

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G H + L L  EM+       R NV            +  T   VL     L+++  
Sbjct: 419 VQRGLHENGLKLFYEMR-------RANV----------SADQATFACVLKASANLASILL 461

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK++H+  IR+    +V  G AL+DMYA C  +  A + F+ M  RNV+TWN ++ AY  
Sbjct: 462 GKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQ 520

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +G+G+  L+  + M+  G      +P+ V+F+ +  ACSH  +V EG+  F  M   Y +
Sbjct: 521 NGDGKGTLKSFEEMIMSG-----YQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNL 575

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
            P  +HY  +VD L R+G+ ++A +L+  MP E D+   W+S+L +CRIH+N  +   AA
Sbjct: 576 APKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI-VWTSVLNSCRIHKNYALARKAA 634

Query: 703 QNLFLLEP-DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
             LF ++    A+ YV +SNI++ A  WD  + V+K M++ GVRK P  SW+E   ++H 
Sbjct: 635 GQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHV 694

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F A D  H Q  ++   +E L+E+M KEGY PD SC   NV++E K   L  HSE+LAIA
Sbjct: 695 FSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIA 754

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           F ++NTP G+ I V KNLR C DCH A K ISKI  REI +RD  RFHHF++G+CSCGDY
Sbjct: 755 FALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDY 814

Query: 882 W 882
           W
Sbjct: 815 W 815



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 27/441 (6%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           +LS R  L   RQ+     ++   N+F ++ +++ Y K G +  A+ +F   ++R +V+W
Sbjct: 52  DLSERGQLCQARQLLD---QMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAW 108

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            T++ + S++++F +A     +M   G +PD V+  ++L  C+ LE+     + HA  ++
Sbjct: 109 TTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVK 168

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
               + N  V + L+D Y     ++  RR+F  +       +N MITGY  N  +EEA+ 
Sbjct: 169 LGHHL-NHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIE 227

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF++M+ + G  P+  T ++V+ A V  +     + IHG  +K    R+ +V NA +D Y
Sbjct: 228 LFVEMQNL-GFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFY 286

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           S+   +   + +F++M   D VS+N +IT Y   G+  +++ L +E+Q    +  R N  
Sbjct: 287 SKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFD--RKNF- 343

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                   P P      T+L    +   L  G+++HA  + +M   D  V ++LVDMYAK
Sbjct: 344 --------PFP------TMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAK 389

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG    A R+F  +  R+ + W  +I A    G  +  L+L   M     R   V  ++ 
Sbjct: 390 CGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEM-----RRANVSADQA 444

Query: 612 TFIALFAACSHSGMVSEGMDL 632
           TF  +  A ++   +  G  L
Sbjct: 445 TFACVLKASANLASILLGKQL 465



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 251/547 (45%), Gaps = 36/547 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK---QIH 100
           +W   + + ++SN+F +A   + EM RS  QPD   +  +L    G  DL + K   Q H
Sbjct: 107 AWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLL---TGCNDLEVAKELYQAH 163

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
           A +VK G+ L+   V NTL++ Y K G  +    ++F  +   D VS+N MI      G 
Sbjct: 164 AQIVKLGHHLNH-RVCNTLLDSYFKTGG-LDSARRLFLEMCGWDSVSFNVMITGYANNGL 221

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFI 219
            + A+E F  M     +PS FT  +V  A   L   D    G+Q+HG  ++     N F+
Sbjct: 222 NEEAIELFVEMQNLGFKPSDFTFAAVISASVGL---DDTAFGQQIHGFVVKTSFIRNVFV 278

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            NA +  Y+K   V++ + LF    + D VS+N I+++ +   K  E++   +++     
Sbjct: 279 GNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTF 338

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECG 338
                   ++L   +    L  G+++HA  + +  + D  F V ++LVDMY  C + E  
Sbjct: 339 DRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVS--MADPDFRVSNSLVDMYAKCGKFEEA 396

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R+F  +S +    W AMI+   Q    E  L LF +M   A +  +  T + V+ A   
Sbjct: 397 DRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRR-ANVSADQATFACVLKASAN 455

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             +    + +H   I+ G   + Y   AL+DMY+    I+ +   F++M  R+ V+WN +
Sbjct: 456 LASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNAL 514

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           ++ Y    Q+GD    L+  + M               +   +P+S++ + +L  C    
Sbjct: 515 LSAY---AQNGDGKGTLKSFEEM--------------IMSGYQPDSVSFLCILTACSHCR 557

Query: 519 ALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
            + +G K  +  +    LA      +A+VD   + G  + A ++   MP   + I W  +
Sbjct: 558 LVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSV 617

Query: 577 IMAYGMH 583
           + +  +H
Sbjct: 618 LNSCRIH 624



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 231/476 (48%), Gaps = 39/476 (8%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EAI  ++EM     +P +F F AV+ A  G+ D + G+QIH  VVK  + + +V V N  
Sbjct: 224 EAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSF-IRNVFVGNAF 282

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++ Y K    + +V K+F+ + E D VS+N +I      GK   +++ F+ + ++  +  
Sbjct: 283 LDFYSKHDC-VNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRK 341

Query: 180 SFTLVS-VALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIMNALMAMYAKLGRVDDAK 237
           +F   + +++A S+L     L++GRQ+H    + + + +  + N+L+ MYAK G+ ++A 
Sbjct: 342 NFPFPTMLSIAASSLD----LQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEAD 397

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F     R  V W  ++S+  Q       +    +M    +  D  + A VL A ++L 
Sbjct: 398 RIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLA 457

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            +  GK++H+  +R+  +  N + G AL+DMY NC  ++   + F+ +S++ +  WNA++
Sbjct: 458 SILLGKQLHSCVIRSGFM--NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALL 515

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHG 410
           + Y QN   +  L  F +M  ++G  P++ +   ++ AC          + F D  G++ 
Sbjct: 516 SAYAQNGDGKGTLKSFEEM-IMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYN 574

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
            A K    R+ Y   A++D   R GR + ++ +   M    D + W +++    I   + 
Sbjct: 575 LAPK----REHYT--AMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYA 628

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            A     ++ NM+              VLR     +T+  +    G   ++ K K+
Sbjct: 629 LARKAAGQLFNMK--------------VLRDAAPYVTMSNIFAEAGQWDSVVKVKK 670



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 13/224 (5%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           +R    W   + +  +       +  + EM R+++  D   F  VLKA A +  + LGKQ
Sbjct: 405 SRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQ 464

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H+ V++ G+   +V     L++MY  C S + D  K F+ ++E++ V+WN++++   + 
Sbjct: 465 LHSCVIRSGF--MNVYSGCALLDMYANCAS-IKDAIKTFEEMSERNVVTWNALLSAYAQN 521

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHG--NSLRVGEW 215
           G     L++F  M+ S  +P S + + +  ACS+     +GL+    + G  N     E 
Sbjct: 522 GDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREH 581

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSS 257
            T +++AL     + GR D+A+ L     FE  ++V W ++++S
Sbjct: 582 YTAMVDAL----CRSGRFDEAEKLMGQMPFEPDEIV-WTSVLNS 620


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/459 (47%), Positives = 300/459 (65%), Gaps = 27/459 (5%)

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           A++  Y++ G ++ ++ +FD ME RD V WN MI GYT  G   +AL+L R M       
Sbjct: 129 AMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA---- 184

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                        + KPN +T+++VL  CG L AL  G+ +H+Y   N +  +V VG+AL
Sbjct: 185 -------------KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTAL 231

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           VDMY+KCG L  AR VFD +  ++V+ WN +I+ Y MHG  QE L+L K+M   G     
Sbjct: 232 VDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG----- 286

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           + P  +TFI + +AC HSG V+EG D+F KMKD+YGIEP  +HY C+V+LLGRAG VE A
Sbjct: 287 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 346

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH--YVLLSNIY 723
           Y+L+  M  E D    W +LLGACR+H  + +GE   +   L++ ++A+   Y+LLSNIY
Sbjct: 347 YELVKNMNIEPDPV-LWGTLLGACRLHGKIALGEKIVE--LLVDQNLANSGTYILLSNIY 403

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           ++   WD    +R  MK+ GV+KEPGCS IE  +++H+FLAG  +H + ++++  LE ++
Sbjct: 404 AAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 463

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 843
             ++  GY P T  VLH++ E EKE  L  HSEKLAIAFG++NT PGTTI++ KNLRVC 
Sbjct: 464 GWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCA 523

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH+ TK ISKI  R+I++RD  RFHHF NG+CSCGDYW
Sbjct: 524 DCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 21/280 (7%)

Query: 205 VHGNSLR------------VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +HG++LR            + E +   + A++  YAK G +D A+ LF   E+RD V WN
Sbjct: 100 IHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 159

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++   +QN    EA++  R+M     KP+ V++ SVL AC  L  L++G+ +H+Y   N
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 219

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            I   N  VG+ALVDMY  C  +E  R VFD I DK +  WN+MI GY  + + +EAL L
Sbjct: 220 GIQF-NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 278

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDM 430
           F  M  + GL P   T   ++ AC  S    +   I  + +K   G +  +++   ++++
Sbjct: 279 FKSMCRM-GLHPTNITFIGILSACGHSGWVTEGWDIF-NKMKDEYGIEPKIEHYGCMVNL 336

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHG 469
             R G +E +  +  +M +  D V W T++     C  HG
Sbjct: 337 LGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA---CRLHG 373



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 74/410 (18%)

Query: 204 QVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q+H    R G  +  I+N  L   YA LGR+D +  LF   ++  +  W  I+       
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHG----- 102

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
                       ALRG   D VS           ++ DT  E    +L            
Sbjct: 103 -----------HALRG---DVVSAQ---------QLFDTMPEKSLVSL------------ 127

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           +A++  Y    E++  R +FD + ++    WN MI GY QN    EAL+LF +M + A  
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK-AKA 186

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T+ SV+ AC +  A      +H +    G+  + +V  AL+DMYS+ G +E ++ 
Sbjct: 187 KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARL 246

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD ++ +D V+WN+MI GY + G   +AL L + M  M                    P
Sbjct: 247 VFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH-----------------P 289

Query: 503 NSITLMTVLPGCGALSALAKGKEIH-----AYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
            +IT + +L  CG    + +G +I       Y I   +         +V++  + G +  
Sbjct: 290 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY----GCMVNLLGRAGHVEQ 345

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELL--KNMVAEGS 601
           A  +   M +  + + W  ++ A  +HG+   G++++ELL  +N+   G+
Sbjct: 346 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGT 395



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 4/171 (2%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + E+D V WN MI    + G  + AL  FR ML +  +P+  T++SV  AC  L  
Sbjct: 146 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG- 204

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
              L  GR VH      G ++N  +  AL+ MY+K G ++DA+ +F   +D+D+V+WN++
Sbjct: 205 --ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 262

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +   + +    EA+   + M   G+ P  ++   +L AC H   +  G +I
Sbjct: 263 IVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 313



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 7/197 (3%)

Query: 1   MASSAQCLTLLPSPPLSSLQT-----HQPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           + S+ Q    +P   L SL        +     A  +   G + R    W   +    ++
Sbjct: 109 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 168

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
               EA++ +  M ++  +P+     +VL A   +  L  G+ +H+++   G   + V V
Sbjct: 169 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN-VHV 227

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
              LV+MY KCGS + D   VFD+I +KD V+WNSMI      G    AL+ F+ M    
Sbjct: 228 GTALVDMYSKCGS-LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 286

Query: 176 VEPSSFTLVSVALACSN 192
           + P++ T + +  AC +
Sbjct: 287 LHPTNITFIGILSACGH 303


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 414/740 (55%), Gaps = 33/740 (4%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSD 129
           ++ +P++     VL   A +++   GK +H++V+K G  L S T+A N L++MY KCG  
Sbjct: 136 NEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSG--LESHTLAGNALISMYAKCGLV 192

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
             D Y  F+RI  KD VSWN++IA        + A + F  ML   ++P+  T+ S+   
Sbjct: 193 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 252

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           C++L    G R G++VH + LR  E   +  ++N+LM+ Y ++G+++ A+ LF++ + RD
Sbjct: 253 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 312

Query: 248 LVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           LVSWN I++  + N ++L+A+ +F   ++L  IKPD V++ SVLPAC+H+  L   K IH
Sbjct: 313 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 372

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            Y +R+  L +++ VG+AL+  Y  C   +   + F  IS K +  WNA++  + ++  +
Sbjct: 373 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 432

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR---YV 423
              + L   M    G+ P++ T+ +++            +  H ++I+ GL +      +
Sbjct: 433 THLVNLLHWMLR-EGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTL 491

Query: 424 QNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQN-- 480
            N ++D Y++ G ++ +  IF  + E R+ V+ N+MI+GY     H DA  +   M    
Sbjct: 492 GNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETD 551

Query: 481 ------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHA 528
                 M      N+  D   ++         KP+ +T+M++LP C  ++++   ++ H 
Sbjct: 552 LTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHG 611

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           Y IR     DV +  A +DMY+KCG +  A ++F   P ++++ +  ++  + MHG G+E
Sbjct: 612 YVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEE 670

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            L +   M+  G     VKP+ V   A+  ACSH+G+V EG  +F  ++  +G +P+ + 
Sbjct: 671 ALRIFSYMLELG-----VKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQ 725

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YACVVDLL R G+++DAY  +  MP E + A  W +LLGACR H  VE+G + A +LF +
Sbjct: 726 YACVVDLLARGGRIKDAYTFVTRMPIEAN-ANIWGTLLGACRTHHEVELGRVVADHLFKI 784

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           E D   +YV++SN+Y++   WD  M++R+ M+   ++K  GCSWIE G   + F+AGD S
Sbjct: 785 ESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSS 844

Query: 769 HQQSEQLHGFLENLSERMRK 788
           H Q   ++  L  L + M++
Sbjct: 845 HPQRSIIYRTLSTLDQLMKE 864



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 202/736 (27%), Positives = 355/736 (48%), Gaps = 92/736 (12%)

Query: 60  EAILSYIEMTRSDI--QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           EA+  ++E  R  +  +P+     A+LK+   I  +  G  +H + +K G+ +S  ++  
Sbjct: 20  EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGH-VSCQSLCK 78

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL-ALEAFRMM-LYSN 175
            L+N+Y K G+  +   K+F  + ++D V WN +++ L  F   +   +  FR M + + 
Sbjct: 79  GLLNLYAKSGALDY-CNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE 137

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV- 233
            +P+S T+  V   C+ L R D    G+ VH   ++ G E +T   NAL++MYAK G V 
Sbjct: 138 AKPNSVTIAIVLPVCARL-REDA---GKSVHSYVIKSGLESHTLAGNALISMYAKCGLVC 193

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPA 292
            DA   F   E +D+VSWN +++  S+N KF E    L    L+G I+P+  +IAS+LP 
Sbjct: 194 SDAYAAFNRIEFKDVVSWNAVIAGFSEN-KFTEEAFKLFHAMLKGPIQPNYATIASILPV 252

Query: 293 CSHLEM---LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           C+ LE       GKE+H + LR   L+++  V ++L+  Y    ++E    +F  +  + 
Sbjct: 253 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 312

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  WNA+I GY  N    +AL LF +   +  + P++ T+ SV+PAC         +GIH
Sbjct: 313 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 372

Query: 410 GHAIKL-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           G+ I+  GL  D  V NAL+  Y++    + +   F  +  +D +SWN ++  +T  G  
Sbjct: 373 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 432

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
              + LL  M              L E +   +P+SIT++T++    A+S + K KE H+
Sbjct: 433 THLVNLLHWM--------------LREGI---RPDSITILTIIQYYAAVSRVKKVKETHS 475

Query: 529 YAIR-NMLATDV--VVGSALVDMYAKCGCLNFARRVF-DLMPVRNVI------------- 571
           Y+IR  +L  D    +G+ ++D YAKCG + +A  +F  L   RNV+             
Sbjct: 476 YSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSS 535

Query: 572 ------------------TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
                             TWN+++  Y  +    + L L   +  +G     +KP+ VT 
Sbjct: 536 SHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG-----MKPDIVTI 590

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY---ACVVDLLGRAGKVEDAYQLIN 670
           +++  AC+H   V        +    Y I    +        +D+  + G V  AY+L  
Sbjct: 591 MSILPACAHMASVH-----MLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLF- 644

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL-FLLEPDVASHYVLLSNIY---SSA 726
           +  P+ D    +++++G   +H    +GE A +   ++LE  V   +V+++ +    S A
Sbjct: 645 LSSPQKDLV-MFTAMVGGFAMHG---MGEEALRIFSYMLELGVKPDHVIITAVLFACSHA 700

Query: 727 QLWDKAMDVRKKMKEM 742
            L D+   +   ++++
Sbjct: 701 GLVDEGWKIFNSIEKV 716



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 251/487 (51%), Gaps = 43/487 (8%)

Query: 157 RFGKWDLALEAF--RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
           R+ + D AL  F  R+      +P+   L ++  +C  +S    +R G  +HG +L++G 
Sbjct: 14  RWLRHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAIS---AIRFGSVLHGYALKLGH 70

Query: 215 WN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM-FLR 272
            +   +   L+ +YAK G +D    LF   + RD V WN ++S L+        VM   R
Sbjct: 71  VSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFR 130

Query: 273 QMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            M +    KP+ V+IA VLP C+ L   D GK +H+Y +++  L  ++  G+AL+ MY  
Sbjct: 131 AMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSG-LESHTLAGNALISMYAK 188

Query: 332 CREVEC--GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
           C  V C      F+ I  K +  WNA+I G+ +N++ EEA  LF  M +   + PN  T+
Sbjct: 189 CGLV-CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLK-GPIQPNYATI 246

Query: 390 SSVVPACVRSE---AFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           +S++P C   E    +   + +H H + ++ L  D  V N+LM  Y R+G++E ++ +F 
Sbjct: 247 ASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFR 306

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
           +M+ RD VSWN +I GY   G+   AL L  E  ++E                  KP+S+
Sbjct: 307 NMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLET----------------IKPDSV 350

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           TL++VLP C  +  L   K IH Y IR+  L  D  VG+AL+  YAKC     A + F +
Sbjct: 351 TLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLM 410

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL---FAACS 621
           +  +++I+WN I+ A+   G    ++ LL  M+ EG     ++P+ +T + +   +AA S
Sbjct: 411 ISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-----IRPDSITILTIIQYYAAVS 465

Query: 622 HSGMVSE 628
               V E
Sbjct: 466 RVKKVKE 472



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 262/573 (45%), Gaps = 66/573 (11%)

Query: 56  NQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD---LSLGKQIHAHVVKYGYGLS 111
           N+F  EA   +  M +  IQP+     ++L   A +++      GK++H HV++    + 
Sbjct: 221 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 280

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V+V N+L++ Y + G  M     +F  +  +D VSWN++IA     G+W  ALE F   
Sbjct: 281 DVSVINSLMSFYLRIG-QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF 339

Query: 172 L-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYA 228
           +    ++P S TLVSV  AC+++     L++ + +HG  +R      +T + NAL++ YA
Sbjct: 340 ISLETIKPDSVTLVSVLPACAHV---HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 396

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K      A   F     +DL+SWN I+ + +++      V  L  M   GI+PD ++I +
Sbjct: 397 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 456

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFDFIS 346
           ++   + +  +   KE H+Y++R  +L  ++   +G+ ++D Y  C  ++    +F  +S
Sbjct: 457 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 516

Query: 347 DKK--------------------------------IALWNAMITGYGQNEYDEEALMLFI 374
           +K+                                +  WN M+  Y +N++ ++AL LF 
Sbjct: 517 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 576

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +++   G+ P+  T+ S++PAC    +       HG+ I+     D  +  A +DMYS+ 
Sbjct: 577 ELQG-QGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKC 634

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  +  +F     +D V +  M+ G+               M  M EE  R   Y L+
Sbjct: 635 GSVFGAYKLFLSSPQKDLVMFTAMVGGFA--------------MHGMGEEALRIFSYMLE 680

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCG 553
              L  KP+ + +  VL  C     + +G +I ++    +     +   + +VD+ A+ G
Sbjct: 681 ---LGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 737

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            +  A      MP+  N   W  ++ A   H E
Sbjct: 738 RIKDAYTFVTRMPIEANANIWGTLLGACRTHHE 770



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 12/200 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R  A ++   +A+  + E+    ++PD     ++L A A +  + + +Q H +V
Sbjct: 554 TWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 613

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  +  + V +    ++MY KCGS ++  YK+F    +KD V + +M+      G  + 
Sbjct: 614 IRACF--NDVRLNGAFIDMYSKCGS-VFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEE 670

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLG---RQVHGNSLRVGEWNTFI 219
           AL  F  ML   V+P    + +V  ACS+    D G ++     +VHG    + ++   +
Sbjct: 671 ALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVV 730

Query: 220 MNALMAMYAKLGRVDDAKTL 239
                 + A+ GR+ DA T 
Sbjct: 731 -----DLLARGGRIKDAYTF 745


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/625 (37%), Positives = 360/625 (57%), Gaps = 26/625 (4%)

Query: 259 SQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           S ND     V +FL ++    +  D + + S++ A S    +     IHA  +++ +   
Sbjct: 115 SSNDSTRTKVAVFLGKLHNSSLLADSI-VQSLVFAISSCTSVSYCSAIHARVIKS-LNYS 172

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           + F+G  LV MY      E  +R+FD + ++ +  WN++++G     Y    L  F +M 
Sbjct: 173 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMR 232

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
             +G  PN  T+ SVV AC    A  + + +HG  +KLG+     V N+L++MY ++G +
Sbjct: 233 TESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 292

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + +  +F++M VR  VSWN+M+  +   G     + L   M+       R  +       
Sbjct: 293 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK-------RAGI------- 338

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P+  T++ +L  C       + + IHAY  R     D+++ +AL+++YAK G LN 
Sbjct: 339 ---NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 395

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           +  +F+ +  R+ I W  ++  Y +H  G+E ++L   MV EG     V+ + VTF  L 
Sbjct: 396 SEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEG-----VEVDHVTFTHLL 450

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACSHSG+V EG   F  M + Y +EP  DHY+C+VDLLGR+G++EDAY+LI  MP E  
Sbjct: 451 SACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPME-P 509

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
            +G W +LLGACR++ NVE+G+  A+ L  L+P    +Y++LSNIYS+A LW  A  VR 
Sbjct: 510 SSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRX 569

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MKE  + + PGCS+IE G++IH+F+ GD  H +S+++H  LE L  ++ + G  P T  
Sbjct: 570 LMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEF 629

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VLH+++EE K  ++  HSEKLAIAFG+L T  G  + + KNLR+C DCH   KF S +E 
Sbjct: 630 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEK 689

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           R II+RD +RFHHF +G CSC DYW
Sbjct: 690 RTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 35/390 (8%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM--FLRQMA 275
           FI + L++MY KLG  +DA+ LF    +RDLVSWN+++S LS    +L A +  F R   
Sbjct: 175 FIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRG-YLGACLNAFCRMRT 233

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +P+ V++ SV+ AC+ +  LD GK +H   ++  +      V S L++MY     +
Sbjct: 234 ESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNS-LINMYGKLGFL 292

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +   ++F+ +  + +  WN+M+  +  N Y E+ + LF  M+  AG+ P+  TM +++ A
Sbjct: 293 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AGINPDQATMVALLRA 351

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C  +      E IH +  + G   D  +  AL+++Y+++GR+  S+ IF++++ RDT++W
Sbjct: 352 CTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAW 411

Query: 456 NTMITGYTI--CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
             M+ GY +  CG+    L  L   + +E +                    +T   +L  
Sbjct: 412 TAMLAGYAVHACGREAIKLFDLMVKEGVEVDH-------------------VTFTHLLSA 452

Query: 514 CGALSALAKGK---EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-N 569
           C     + +GK   EI +   R     D    S +VD+  + G L  A  +   MP+  +
Sbjct: 453 CSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPS 510

Query: 570 VITWNVIIMAYGMHGE---GQEVLELLKNM 596
              W  ++ A  ++G    G+EV E L ++
Sbjct: 511 SGVWGALLGACRVYGNVELGKEVAEQLLSL 540



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 215/466 (46%), Gaps = 29/466 (6%)

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ 145
           A++    +S    IHA V+K     S   + + LV+MY K G D  D  ++FD +  +D 
Sbjct: 148 AISSCTSVSYCSAIHARVIK-SLNYSDGFIGDRLVSMYFKLGYDE-DAQRLFDEMPNRDL 205

Query: 146 VSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           VSWNS+++ L   G     L AF RM   S  +P+  TL+SV  AC+ +   D    G+ 
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE---GKS 262

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG  +++G      ++N+L+ MY KLG +D A  LF+    R LVSWN++V   + N  
Sbjct: 263 LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGY 322

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             + +     M   GI PD  ++ ++L AC+   +    + IHAY  R     D   + +
Sbjct: 323 AEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD-IIIAT 381

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           AL+++Y     +     +F+ I D+    W AM+ GY  +    EA+ LF  M +  G+ 
Sbjct: 382 ALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVK-EGVE 440

Query: 384 PNATTMSSVVPACVRSEAFPDKEG---IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            +  T + ++ AC  S    + +    I     ++    D Y  + ++D+  R GR+E +
Sbjct: 441 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDA 498

Query: 441 KTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRN-----NVYDLD 494
             +   M +  +   W  ++    + G       +  ++ +++   +RN     N+Y   
Sbjct: 499 YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS-A 557

Query: 495 ETVLRPKPNSITLM-----TVLPGCGALSALAKGKEIHAYAIRNML 535
             + R       LM     T  PGC   S +  G +IH + + + L
Sbjct: 558 AGLWRXASKVRXLMKERRLTRNPGC---SFIEHGNKIHRFVVGDQL 600



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 36/346 (10%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S  QP+     +V+ A A +  L  GK +H  VVK G       V N+L+NMYGK G 
Sbjct: 233 TESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMS-GKAKVVNSLINMYGKLGF 291

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
            +    ++F+ +  +  VSWNSM+      G  +  ++ F +M  + + P   T+V++  
Sbjct: 292 -LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLR 350

Query: 189 ACSNLSRRDGLRLGRQ---VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           AC++        LGRQ   +H    R G   +  I  AL+ +YAKLGR++ ++ +F+  +
Sbjct: 351 ACTDTG------LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 404

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK- 303
           DRD ++W  +++  + +    EA+     M   G++ D V+   +L ACSH  +++ GK 
Sbjct: 405 DRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 464

Query: 304 --EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITG- 359
             EI +   R +  +D+    S +VD+      +E    +   +  +    +W A++   
Sbjct: 465 YFEIMSEVYRVEPRLDHY---SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 521

Query: 360 --YGQNEYDEEALMLFIKME--------------EVAGLWPNATTM 389
             YG  E  +E     + ++                AGLW  A+ +
Sbjct: 522 RVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKV 567


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/667 (36%), Positives = 369/667 (55%), Gaps = 71/667 (10%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N    N ++  + + G ++ A  +F+S   +  V+WN++++  S     ++     RQ+ 
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVA---RQLF 60

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            R  +PD  S  +++ AC                                   Y +  +V
Sbjct: 61  DRIPEPDIFSY-NIMLAC-----------------------------------YLHNADV 84

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R  FD +  K  A WN MI+G+ QN   ++A  LF+ M        N+ + ++++  
Sbjct: 85  ESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPV-----RNSVSWNAMISG 139

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
            V S        +     ++   R      A++  + + G+IE+++  F++M +++ V+W
Sbjct: 140 YVESGDL----DLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTW 195

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MI GY    Q  + L L + M                E+  RP P+S++  +VL GC 
Sbjct: 196 NAMIAGYIENCQAENGLKLFKRMV---------------ESGFRPNPSSLS--SVLLGCS 238

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            LSAL  GK++H    ++ ++ ++  G++L+ MY KCG L  A ++F +MP ++V+TWN 
Sbjct: 239 NLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNA 298

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I  Y  HG G++ L L   M  EG     +KP+ +TF+A+ +AC+H+G V  G++ F  
Sbjct: 299 MISGYAQHGAGEKALYLFDKMRDEG-----MKPDWITFVAVLSACNHAGFVDLGIEYFNS 353

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M  DYG+E  PDHY CVVDLLGR GK+ +A  LI  MP +   +  + +LLGACRIH+N+
Sbjct: 354 MVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK-PHSAIFGTLLGACRIHKNL 412

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           E+ E AA+NL  L+P+ A+ YV L+N+Y++   WD    VR+ MK+  V K PG SWIE 
Sbjct: 413 ELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEV 472

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
              +H+F +GD  H +   +H  L  L  +MR  GYVPD    LH+V EE+K+ +L  HS
Sbjct: 473 KSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHS 532

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           EKLAIA+G++  P GT IRV KNLRVC DCH ATK+IS IE R II+RD  RFHHF+ G 
Sbjct: 533 EKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGE 592

Query: 876 CSCGDYW 882
           CSCGDYW
Sbjct: 593 CSCGDYW 599



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 196/459 (42%), Gaps = 69/459 (15%)

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           S+V  +N ++  + + G D+    +VF+ +T K  V+WNSM+A                 
Sbjct: 3   SNVISSNRVITNHIRSG-DLNSALRVFESMTVKTTVTWNSMLAG---------------- 45

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKL 230
             YSN                   RR  +++ RQ+     R+ E + F  N ++A Y   
Sbjct: 46  --YSN-------------------RRGKIKVARQLFD---RIPEPDIFSYNIMLACYLHN 81

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
             V+ A+  F     +D  SWNT++S  SQN    +A      M +R    + VS  +++
Sbjct: 82  ADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR----NSVSWNAMI 137

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
                   LD  K++   A    ++       +A++  +    ++E   + F+ +  K +
Sbjct: 138 SGYVESGDLDLAKQLFEVAPVRSVV-----AWTAMITGFMKFGKIELAEKYFEEMPMKNL 192

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAMI GY +N   E  L LF +M E +G  PN +++SSV+  C    A    + +H 
Sbjct: 193 VTWNAMIAGYIENCQAENGLKLFKRMVE-SGFRPNPSSLSSVLLGCSNLSALKLGKQVHQ 251

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
              K  +  +     +L+ MY + G +E +  +F  M  +D V+WN MI+GY   G    
Sbjct: 252 LICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEK 311

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L  +M+              DE +   KP+ IT + VL  C     +  G E     
Sbjct: 312 ALYLFDKMR--------------DEGM---KPDWITFVAVLSACNHAGFVDLGIEYFNSM 354

Query: 531 IRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +R+  +       + +VD+  + G L  A  +   MP +
Sbjct: 355 VRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 414/740 (55%), Gaps = 33/740 (4%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSD 129
           ++ +P++     VL   A +++   GK +H++V+K G  L S T+A N L++MY KCG  
Sbjct: 75  NEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSG--LESHTLAGNALISMYAKCGLV 131

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
             D Y  F+RI  KD VSWN++IA        + A + F  ML   ++P+  T+ S+   
Sbjct: 132 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 191

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           C++L    G R G++VH + LR  E   +  ++N+LM+ Y ++G+++ A+ LF++ + RD
Sbjct: 192 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 251

Query: 248 LVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           LVSWN I++  + N ++L+A+ +F   ++L  IKPD V++ SVLPAC+H+  L   K IH
Sbjct: 252 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 311

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            Y +R+  L +++ VG+AL+  Y  C   +   + F  IS K +  WNA++  + ++  +
Sbjct: 312 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 371

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR---YV 423
              + L   M    G+ P++ T+ +++            +  H ++I+ GL +      +
Sbjct: 372 THLVNLLHWMLR-EGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTL 430

Query: 424 QNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQN-- 480
            N ++D Y++ G ++ +  IF  + E R+ V+ N+MI+GY     H DA  +   M    
Sbjct: 431 GNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETD 490

Query: 481 ------MEEEKNRNNVYDLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHA 528
                 M      N+  D   ++         KP+ +T+M++LP C  ++++   ++ H 
Sbjct: 491 LTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHG 550

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           Y IR     DV +  A +DMY+KCG +  A ++F   P ++++ +  ++  + MHG G+E
Sbjct: 551 YVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEE 609

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            L +   M+  G     VKP+ V   A+  ACSH+G+V EG  +F  ++  +G +P+ + 
Sbjct: 610 ALRIFSYMLELG-----VKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQ 664

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           YACVVDLL R G+++DAY  +  MP E + A  W +LLGACR H  VE+G + A +LF +
Sbjct: 665 YACVVDLLARGGRIKDAYTFVTRMPIEAN-ANIWGTLLGACRTHHEVELGRVVADHLFKI 723

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           E D   +YV++SN+Y++   WD  M++R+ M+   ++K  GCSWIE G   + F+AGD S
Sbjct: 724 ESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSS 783

Query: 769 HQQSEQLHGFLENLSERMRK 788
           H Q   ++  L  L + M++
Sbjct: 784 HPQRSIIYRTLSTLDQLMKE 803



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 184/657 (28%), Positives = 317/657 (48%), Gaps = 86/657 (13%)

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL-ALEAFRMM- 171
           ++   L+N+Y K G+  +   K+F  + ++D V WN +++ L  F   +   +  FR M 
Sbjct: 14  SLCKGLLNLYAKSGALDY-CNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMH 72

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
           + +  +P+S T+  V   C+ L R D    G+ VH   ++ G E +T   NAL++MYAK 
Sbjct: 73  MVNEAKPNSVTIAIVLPVCARL-REDA---GKSVHSYVIKSGLESHTLAGNALISMYAKC 128

Query: 231 GRV-DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIAS 288
           G V  DA   F   E +D+VSWN +++  S+N KF E    L    L+G I+P+  +IAS
Sbjct: 129 GLVCSDAYAAFNRIEFKDVVSWNAVIAGFSEN-KFTEEAFKLFHAMLKGPIQPNYATIAS 187

Query: 289 VLPACSHLEM---LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           +LP C+ LE       GKE+H + LR   L+++  V ++L+  Y    ++E    +F  +
Sbjct: 188 ILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNM 247

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             + +  WNA+I GY  N    +AL LF +   +  + P++ T+ SV+PAC         
Sbjct: 248 KSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVA 307

Query: 406 EGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           +GIHG+ I+  GL  D  V NAL+  Y++    + +   F  +  +D +SWN ++  +T 
Sbjct: 308 KGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTE 367

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G     + LL  M              L E +   +P+SIT++T++    A+S + K K
Sbjct: 368 SGCETHLVNLLHWM--------------LREGI---RPDSITILTIIQYYAAVSRVKKVK 410

Query: 525 EIHAYAIR-NMLATDV--VVGSALVDMYAKCGCLNFARRVF-DLMPVRNVI--------- 571
           E H+Y+IR  +L  D    +G+ ++D YAKCG + +A  +F  L   RNV+         
Sbjct: 411 ETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGY 470

Query: 572 ----------------------TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
                                 TWN+++  Y  +    + L L   +  +G     +KP+
Sbjct: 471 VNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG-----MKPD 525

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY---ACVVDLLGRAGKVEDAY 666
            VT +++  AC+H   V        +    Y I    +        +D+  + G V  AY
Sbjct: 526 IVTIMSILPACAHMASVH-----MLRQCHGYVIRACFNDVRLNGAFIDMYSKCGSVFGAY 580

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL-FLLEPDVASHYVLLSNI 722
           +L  +  P+ D    +++++G   +H    +GE A +   ++LE  V   +V+++ +
Sbjct: 581 KLF-LSSPQKDLV-MFTAMVGGFAMHG---MGEEALRIFSYMLELGVKPDHVIITAV 632



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 262/573 (45%), Gaps = 66/573 (11%)

Query: 56  NQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD---LSLGKQIHAHVVKYGYGLS 111
           N+F  EA   +  M +  IQP+     ++L   A +++      GK++H HV++    + 
Sbjct: 160 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 219

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V+V N+L++ Y + G  M     +F  +  +D VSWN++IA     G+W  ALE F   
Sbjct: 220 DVSVINSLMSFYLRIG-QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF 278

Query: 172 L-YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYA 228
           +    ++P S TLVSV  AC+++     L++ + +HG  +R      +T + NAL++ YA
Sbjct: 279 ISLETIKPDSVTLVSVLPACAHV---HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 335

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K      A   F     +DL+SWN I+ + +++      V  L  M   GI+PD ++I +
Sbjct: 336 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 395

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFDFIS 346
           ++   + +  +   KE H+Y++R  +L  ++   +G+ ++D Y  C  ++    +F  +S
Sbjct: 396 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 455

Query: 347 DKK--------------------------------IALWNAMITGYGQNEYDEEALMLFI 374
           +K+                                +  WN M+  Y +N++ ++AL LF 
Sbjct: 456 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 515

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +++   G+ P+  T+ S++PAC    +       HG+ I+     D  +  A +DMYS+ 
Sbjct: 516 ELQG-QGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKC 573

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  +  +F     +D V +  M+ G+               M  M EE  R   Y L+
Sbjct: 574 GSVFGAYKLFLSSPQKDLVMFTAMVGGFA--------------MHGMGEEALRIFSYMLE 619

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCG 553
              L  KP+ + +  VL  C     + +G +I ++    +     +   + +VD+ A+ G
Sbjct: 620 ---LGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGG 676

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
            +  A      MP+  N   W  ++ A   H E
Sbjct: 677 RIKDAYTFVTRMPIEANANIWGTLLGACRTHHE 709



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 12/200 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +R  A ++   +A+  + E+    ++PD     ++L A A +  + + +Q H +V
Sbjct: 493 TWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 552

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  +  + V +    ++MY KCGS ++  YK+F    +KD V + +M+      G  + 
Sbjct: 553 IRACF--NDVRLNGAFIDMYSKCGS-VFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEE 609

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLG---RQVHGNSLRVGEWNTFI 219
           AL  F  ML   V+P    + +V  ACS+    D G ++     +VHG    + ++   +
Sbjct: 610 ALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVV 669

Query: 220 MNALMAMYAKLGRVDDAKTL 239
                 + A+ GR+ DA T 
Sbjct: 670 -----DLLARGGRIKDAYTF 684


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/719 (35%), Positives = 404/719 (56%), Gaps = 33/719 (4%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           Q   F +P+V+KA++ +  L +G+++H  +VK G G   V +  +L+ MYG+ G  + D 
Sbjct: 99  QNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHV-IGTSLLGMYGELGC-LSDA 156

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
            KVFD I  +D VSW+S++A     G+    LE  R M+   V P S T++SVA AC  +
Sbjct: 157 RKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKV 216

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                LRL + VHG  +R     +  + N+L+ MY +   +  AK +F+S  D     W 
Sbjct: 217 G---CLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWT 273

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +++SS +QN  F EA+   ++M    ++ + V++ SVL  C+ L  L  GK +H + LR 
Sbjct: 274 SMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRR 333

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
           ++   +  +G AL+D Y  C ++    ++   I +  +  WN +I+ Y +   +EEA++L
Sbjct: 334 EMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVL 393

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F+ M E  GL P++ +++S + AC  + +    + IHGH  K G   D +VQN+LMDMYS
Sbjct: 394 FVCMLE-KGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFA-DEFVQNSLMDMYS 451

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G ++++ TIFD +  +  V+WN MI G++  G   +AL L  EM          N  D
Sbjct: 452 KCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMC--------FNCMD 503

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
           ++E         +T ++ +  C     L KGK IH   + + +  D+ + +ALVDMYAKC
Sbjct: 504 INE---------VTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKC 554

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G L  A+ VF+ MP ++V++W+ +I AYG+HG+      L   MV        +KPNEVT
Sbjct: 555 GDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVES-----HIKPNEVT 609

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F+ + +AC H+G V EG   F  M+ DYGI P+ +H+A +VDLL RAG ++ AY++I   
Sbjct: 610 FMNILSACRHAGSVEEGKFYFNSMR-DYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKST 668

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
               D A  W +LL  CRIH  +++     + L  +  +   +Y LLSNIY+    W ++
Sbjct: 669 CQHID-ASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYES 727

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ-QSEQLHGFLENLSERMRKEG 790
             VR +M+ MG++K PG S IE  D+I++F AGD S   Q ++++ FL+N     R++G
Sbjct: 728 RKVRSRMEGMGLKKVPGYSSIEIDDKIYRFGAGDTSSAWQMDEIYRFLDNFQSLAREQG 786



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 162/637 (25%), Positives = 297/637 (46%), Gaps = 50/637 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + + RE +     M    + PD+    +V +A   +  L L K +H +V
Sbjct: 170 SWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYV 229

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++        ++ N+L+ MYG+C S +     +F+ +++     W SMI++  + G ++ 
Sbjct: 230 IRKEMA-GDASLRNSLIVMYGQC-SYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEE 287

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMN 221
           A++AF+ M  S VE ++ T++SV   C+ L     L+ G+ VH   LR  +   +  +  
Sbjct: 288 AIDAFKKMQESEVEVNAVTMISVLCCCARLGW---LKEGKSVHCFILRREMDGADLDLGP 344

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           ALM  YA   ++   + L     +  +VSWNT++S  ++     EA++    M  +G+ P
Sbjct: 345 ALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMP 404

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  S+AS + AC+    +  G++IH +  +      + FV ++L+DMY  C  V+    +
Sbjct: 405 DSFSLASSISACAGASSVRFGQQIHGHVTKRG--FADEFVQNSLMDMYSKCGFVDLAYTI 462

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I +K I  WN MI G+ QN    EAL LF +M     +  N  T  S + AC  S  
Sbjct: 463 FDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEM-CFNCMDINEVTFLSAIQACSNSGY 521

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH   +  G+ +D Y+  AL+DMY++ G ++ ++ +F+ M  +  VSW+ MI  
Sbjct: 522 LLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAA 581

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y I GQ   A  L  +M                      KPN +T M +L  C    ++ 
Sbjct: 582 YGIHGQITAATTLFTKMVESH-----------------IKPNEVTFMNILSACRHAGSVE 624

Query: 522 KGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +GK  +  ++R+  +  +    +++VD+ ++ G ++ A  +        +   W  ++  
Sbjct: 625 EGK-FYFNSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNG 683

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK-- 637
             +HG     ++L+ N+  E     E++ N+  +  L      S + +EG + +   K  
Sbjct: 684 CRIHGR----MDLIHNIHKELR---EIRTNDTGYYTLL-----SNIYAEGGNWYESRKVR 731

Query: 638 ---DDYGIEPSPDHYACVVD---LLGRAGKVEDAYQL 668
              +  G++  P + +  +D       AG    A+Q+
Sbjct: 732 SRMEGMGLKKVPGYSSIEIDDKIYRFGAGDTSSAWQM 768



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H H +  GL  D      L++ Y+RMG +  S+ +F+     D+  +  +I  Y +   
Sbjct: 20  LHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCY-LWHH 78

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             D ++ L      +  +   N      T L P        +V+     +  L  G+++H
Sbjct: 79  LFDQVVSLYHHHIQKGSRLTQNC-----TFLYP--------SVIKAISVVGGLVVGRKVH 125

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              ++  L TD V+G++L+ MY + GCL+ AR+VFD + VR++++W+ ++  Y  +G  +
Sbjct: 126 GRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPR 185

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           E LE+L+ MV+EG     V P+ VT +++  AC   G
Sbjct: 186 EGLEMLRWMVSEG-----VGPDSVTMLSVAEACGKVG 217



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           M +   C  L +L+   ++HA+ +   L +D +  + L++ YA+ G L+ +R VF+  P 
Sbjct: 5   MPLFRSCSTLRSLS---QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPS 61

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
            +   + V+I  Y  H    +V+ L  + + +GSR
Sbjct: 62  PDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSR 96


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 289/866 (33%), Positives = 455/866 (52%), Gaps = 76/866 (8%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           SNQ   A+LS      +D   D++    +L       D+ L K +HA + K       + 
Sbjct: 73  SNQ--PALLSNFPSVSNDTVNDHYY---LLDLSVRYDDVELIKAVHASIFKLA---EDIH 124

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +AN L+  Y K G  + + YKVF  ++  + VS+ +MI+   +  +   A+E F  M  S
Sbjct: 125 LANALIVAYLKLGM-VPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSS 183

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRV 233
            +E + F+ V++   C  L     L LG Q+H   +++G  N TF+ NALM +Y K G +
Sbjct: 184 GIELNEFSFVAILTVCIRLL---DLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 240

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGVSIASVLPA 292
           D    LF     RD+ SWNT++SS+ +   +  A    R M  + G + D  +++++L A
Sbjct: 241 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 300

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC---------------REV-- 335
              L  +  G+EIHA+ ++      N  V +AL+  Y  C               R+V  
Sbjct: 301 ARGLASM-VGREIHAHVIKIG-FESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 358

Query: 336 --------------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                         +    VFD +  +    +NA+++G+ QN    +AL  F +M E  G
Sbjct: 359 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVE-EG 417

Query: 382 LWPNATTMSSVVPAC-VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           +     T++ V+ AC +  EA   K+ IHG  +K G G +  ++ AL+DM +R GR+  +
Sbjct: 418 VELTDFTLTGVLNACGLLMEAKISKQ-IHGFILKFGFGSNACIEAALLDMCTRCGRMADA 476

Query: 441 KTIFDDMEVRDT--VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           + +F       +  + W +MI GY    Q  +A+ L  + Q             L+  ++
Sbjct: 477 QKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQ-------------LEGAMV 523

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             K  S  ++ V   CG L+    GK+IH +A+++   +D+ VG++++ MY+KC  ++ A
Sbjct: 524 VDKVASTAVLGV---CGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 580

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            +VF++MP  ++++WN +I  + +H +G E L +   M   G     +KP+ VTF+ + +
Sbjct: 581 IKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG-----IKPDTVTFVLIIS 635

Query: 619 ACSH--SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
           A  H  S +V     LF  MK  Y I+P+ +HY  +V +LG  G +E+A ++IN MP E 
Sbjct: 636 AYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIE- 694

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
            +A  W +LL ACRIH N  IG+ AA++L  ++P   S Y+L+SN+YS+   W  +  VR
Sbjct: 695 PEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVR 754

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           ++M+  G RK PG SWI   +++H F A D SH Q++ +H  LE L     K GYVPDTS
Sbjct: 755 EEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTS 814

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
            VLH V E +K+  L  HS K+A  +G+L T PG  IR+ KN+ +C DCH   K++S + 
Sbjct: 815 FVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVT 874

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REI LRD    H F NG CSC DYW
Sbjct: 875 GREIFLRDASGHHCFLNGQCSCKDYW 900


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 289/866 (33%), Positives = 455/866 (52%), Gaps = 76/866 (8%)

Query: 55  SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           SNQ   A+LS      +D   D++    +L       D+ L K +HA + K       + 
Sbjct: 55  SNQ--PALLSNFPSVSNDTVNDHYY---LLDLSVRYDDVELIKAVHASIFKLA---EDIH 106

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +AN L+  Y K G  + + YKVF  ++  + VS+ +MI+   +  +   A+E F  M  S
Sbjct: 107 LANALIVAYLKLGM-VPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSS 165

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRV 233
            +E + F+ V++   C  L     L LG Q+H   +++G  N TF+ NALM +Y K G +
Sbjct: 166 GIELNEFSFVAILTVCIRLL---DLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYL 222

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGVSIASVLPA 292
           D    LF     RD+ SWNT++SS+ +   +  A    R M  + G + D  +++++L A
Sbjct: 223 DSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVA 282

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC---------------REV-- 335
              L  +  G+EIHA+ ++      N  V +AL+  Y  C               R+V  
Sbjct: 283 ARGLASM-VGREIHAHVIKIG-FESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 340

Query: 336 --------------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
                         +    VFD +  +    +NA+++G+ QN    +AL  F +M E  G
Sbjct: 341 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVE-EG 399

Query: 382 LWPNATTMSSVVPAC-VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           +     T++ V+ AC +  EA   K+ IHG  +K G G +  ++ AL+DM +R GR+  +
Sbjct: 400 VELTDFTLTGVLNACGLLMEAKISKQ-IHGFILKFGFGSNACIEAALLDMCTRCGRMADA 458

Query: 441 KTIFDDMEVRDT--VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
           + +F       +  + W +MI GY    Q  +A+ L  + Q             L+  ++
Sbjct: 459 QKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQ-------------LEGAMV 505

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             K  S  ++ V   CG L+    GK+IH +A+++   +D+ VG++++ MY+KC  ++ A
Sbjct: 506 VDKVASTAVLGV---CGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 562

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            +VF++MP  ++++WN +I  + +H +G E L +   M   G     +KP+ VTF+ + +
Sbjct: 563 IKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG-----IKPDTVTFVLIIS 617

Query: 619 ACSH--SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
           A  H  S +V     LF  MK  Y I+P+ +HY  +V +LG  G +E+A ++IN MP E 
Sbjct: 618 AYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIE- 676

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
            +A  W +LL ACRIH N  IG+ AA++L  ++P   S Y+L+SN+YS+   W  +  VR
Sbjct: 677 PEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVR 736

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           ++M+  G RK PG SWI   +++H F A D SH Q++ +H  LE L     K GYVPDTS
Sbjct: 737 EEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTS 796

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
            VLH V E +K+  L  HS K+A  +G+L T PG  IR+ KN+ +C DCH   K++S + 
Sbjct: 797 FVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVT 856

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REI LRD    H F NG CSC DYW
Sbjct: 857 GREIFLRDASGHHCFLNGQCSCKDYW 882


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/761 (34%), Positives = 408/761 (53%), Gaps = 43/761 (5%)

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL---ALEAFRMMLYSNVEPSSFTLVSV 186
           M +    F  +T       N MI     F   DL   AL A+R ML +   P  FT   V
Sbjct: 70  MDEAADAFAGVTRPGAFLHNVMIRG---FADADLPLDALAAYRAMLDAGARPDRFTFPVV 126

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
              C+   R   L  GR  H   +++G   + +  N+L+A+YAKLG V DA+ +F     
Sbjct: 127 LKCCA---RAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPA 183

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           RD+VSWNT+V     N     A+   R+M  AL+ +  D V + + L AC     L  G+
Sbjct: 184 RDIVSWNTMVDGYVSNGMGALALACFREMNDALQ-VGHDSVGVIAALAACCLESALALGR 242

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           EIH YA+R+ +  D   VG++LVDMYC C  V     VF  +  + +  WN MI GY  N
Sbjct: 243 EIHGYAIRHGLEQDVK-VGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           E   +A   F++M  V G      T  +++ AC ++E+      +H + ++        +
Sbjct: 302 ERPVDAFDCFMQMR-VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           + AL++MY ++G++E S+ IF  +  +  VSWN MI  Y     + +A+ L  E+ N   
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQP- 419

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
                 +Y          P+  T+ TV+P    L ++ + K++H+Y ++       ++ +
Sbjct: 420 ------LY----------PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           A++ MYA+CG +  +R +FD MP ++VI+WN II+ Y +HG+G+  LE+   M   G   
Sbjct: 464 AVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSG--- 520

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             ++PNE TF+++  ACS SG+ +EG   F  M+ +YG+ P  +HY C+ DLLGRAG++ 
Sbjct: 521 --MEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELR 578

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
           +  + I  MP     +  W SLL A R   +++I E AA+ +F LE +    YV+LS++Y
Sbjct: 579 EVLRFIENMPIA-PTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMY 637

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A  W+    +R  MKE G+R+    S +E  ++   F+ GD SH QSE++H F + LS
Sbjct: 638 ADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS 697

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEKETLLC--GHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
              R  G   D+S  L + +     T +    HS +LA+AFG++++  G+ + V KN+RV
Sbjct: 698 ---RNIGEDLDSSSNLRDSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRV 754

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           CN CH A K ISK   R+I++ D + +H F +G+C CGDYW
Sbjct: 755 CNHCHHALKLISKYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/522 (31%), Positives = 264/522 (50%), Gaps = 27/522 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A ++   +A+ +Y  M  +  +PD F FP VLK  A    L  G+  HA V+K G 
Sbjct: 92  IRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGL 151

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
           G + V  AN+LV +Y K G  + D  +VFD +  +D VSWN+M+      G   LAL  F
Sbjct: 152 G-ADVYTANSLVALYAKLGL-VGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACF 209

Query: 169 RMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           R M  +  V   S  +++   AC        L LGR++HG ++R G E +  +  +L+ M
Sbjct: 210 REMNDALQVGHDSVGVIAALAAC---CLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G V  A+ +F     R +V+WN ++   + N++ ++A     QM + G + + V+ 
Sbjct: 267 YCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTA 326

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            ++L AC+  E    G+ +HAY +R   L  +  + +AL++MY    +VE   ++F  I+
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFL-PHVVLETALLEMYGKVGKVESSEKIFGQIT 385

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           DK +  WN MI  Y   E  +EA+ LF+++     L+P+  TM++VVPA V   +    +
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQP-LYPDYFTMTTVVPAFVLLGSIRQCK 444

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H + +KLG G    + NA+M MY+R G I  S+ IFD M  +D +SWNT+I GY I G
Sbjct: 445 QMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHG 504

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KE 525
           Q   AL +  EM+    E                 PN  T ++VL  C      A+G KE
Sbjct: 505 QGKIALEMFDEMKCSGME-----------------PNESTFVSVLTACSVSGLEAEGWKE 547

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            ++      +   +     + D+  + G L    R  + MP+
Sbjct: 548 FNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPI 589



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 213/478 (44%), Gaps = 28/478 (5%)

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+  +   GR+D+A   F           N ++   +  D  L+A+   R M   G +P
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  +   VL  C+    L  G+  HA  ++  +  D  +  ++LV +Y     V    RV
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGAD-VYTANSLVALYAKLGLVGDAERV 177

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +  + I  WN M+ GY  N     AL  F +M +   +  ++  + + + AC    A
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IHG+AI+ GL +D  V  +L+DMY + G +  ++ +F  M +R  V+WN MI G
Sbjct: 238 LALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y +  +  DA     +M        R + + ++          +T + +L  C    +  
Sbjct: 298 YALNERPVDAFDCFMQM--------RVDGFQVE---------VVTAINLLTACAQTESSL 340

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G+ +HAY +R      VV+ +AL++MY K G +  + ++F  +  + +++WN +I AY 
Sbjct: 341 FGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYM 400

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDY 640
                QE + L   ++ +      + P+  T   +  A    G + +   +  Y +K  Y
Sbjct: 401 YMEMYQEAIALFLELLNQ-----PLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGY 455

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           G   S      V+ +  R G +  + ++ + MP +     +W++++    IH   +I 
Sbjct: 456 G--DSTLIMNAVMHMYARCGNIVASREIFDKMPGK--DVISWNTIIIGYAIHGQGKIA 509



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +      ++EAI  ++E+    + PD F    V+ A   +  +   KQ+H+++
Sbjct: 391 SWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYI 450

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK GYG S++ + N +++MY +CG ++    ++FD++  KD +SWN++I      G+  +
Sbjct: 451 VKLGYGDSTL-IMNAVMHMYARCG-NIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKI 508

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           ALE F  M  S +EP+  T VSV  ACS
Sbjct: 509 ALEMFDEMKCSGMEPNESTFVSVLTACS 536


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/597 (38%), Positives = 346/597 (57%), Gaps = 24/597 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           A++L +C     +  G+++HA  L + + +D + + + LVD+Y +C  V   RR+FD + 
Sbjct: 67  ATILRSCVLSRAVRPGRQLHARLLVSGLGLD-AVLATRLVDLYASCGLVSVARRLFDEMP 125

Query: 347 DK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           ++  + LWN +I  Y ++   E A+ L+ +M     + P+  T   V+ AC         
Sbjct: 126 NQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAG 185

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H   ++     D +V   L+DMY++ G ++ +  +FD   VRD V WN+MI     C
Sbjct: 186 REVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA---C 242

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ+G     L   +NM  E                 P  +TL++ +       AL +G+E
Sbjct: 243 GQNGRPAEALALCRNMAAEG--------------IAPTIVTLVSAISAAADAGALPRGRE 288

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H Y  R    +   + ++L+DMYAK G +  AR +FD +  R +I+WN +I  +GMHG 
Sbjct: 289 LHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGH 348

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
                EL + M  E     +V P+ +TF+ + +AC+H GMV E  ++F  M   Y I+P 
Sbjct: 349 ADHACELFRRMRNEA----QVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPM 404

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY C+VD+LG +G+ ++A  +I  M  + D +G W +LL  C+IH+NVE+ E+A   L
Sbjct: 405 VQHYTCLVDVLGHSGRFKEASDVIKGMLVKPD-SGIWGALLNGCKIHKNVELAELALHKL 463

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             LEP+ A +YVLLSNIY+ +  W++A  VRK M   G++K   CSWIE   + H FL G
Sbjct: 464 IELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVG 523

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH +S++++  LE L   + + GYVPDT+ V HNV ++EK  ++ GHSE+LAIAFG++
Sbjct: 524 DASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLI 583

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +TPPGT + V KNLRVC DCH   K IS+IE REII+RDV R+HHF NG CSC D+W
Sbjct: 584 STPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 205/418 (49%), Gaps = 15/418 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +L++    + +  G+Q+HA ++  G GL +V +A  LV++Y  CG  +    ++FD 
Sbjct: 66  YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAV-LATRLVDLYASCGL-VSVARRLFDE 123

Query: 140 ITEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRD 197
           +  +  V  WN +I    R G  + A+E +R ML   ++EP +FT   V  AC+ L    
Sbjct: 124 MPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALL--- 180

Query: 198 GLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
            L  GR+VH   +R   W  + F+   L+ MYAK G VD+A  +F S   RD V WN+++
Sbjct: 181 DLGAGREVHDRVMRT-SWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMI 239

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           ++  QN +  EA+   R MA  GI P  V++ S + A +    L  G+E+H Y  R    
Sbjct: 240 AACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFG 299

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             +    ++L+DMY     V   R +FD +  +++  WNAMI G+G + + + A  LF +
Sbjct: 300 SQDKL-KTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRR 358

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSR 433
           M   A + P+  T   V+ AC       + + +    + +       VQ+   L+D+   
Sbjct: 359 MRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTV-YSIKPMVQHYTCLVDVLGH 417

Query: 434 MGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            GR + +  +   M V+ D+  W  ++ G  I      A + L ++  +E E   N V
Sbjct: 418 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYV 475



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 134/264 (50%), Gaps = 8/264 (3%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +R+ AR      AI  Y EM     ++PDNF +P VLKA A + DL  G+++H  V
Sbjct: 133 WNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRV 192

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  +  + V V   L++MY KCG  + + + VFD  T +D V WNSMIA   + G+   
Sbjct: 193 MRTSWA-ADVFVCAGLIDMYAKCGC-VDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAE 250

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNA 222
           AL   R M    + P+  TLVS   A ++      L  GR++HG   R G  +   +  +
Sbjct: 251 ALALCRNMAAEGIAPTIVTLVSAISAAADAGA---LPRGRELHGYGWRRGFGSQDKLKTS 307

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKP 281
           L+ MYAK G V  A+ LF     R+L+SWN ++     +     A    R+M     + P
Sbjct: 308 LLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMP 367

Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
           D ++   VL AC+H  M+   KE+
Sbjct: 368 DHITFVGVLSACNHGGMVQEAKEV 391



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N    ++++ +CV S A      +H   +  GLG D  +   L+D+Y+  G + +++ +F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 445 DDMEVRDTVS-WNTMITGYTICGQHGDALMLLREM---QNMEEEKNRNNVYDLDETVLRP 500
           D+M  +  V  WN +I  Y   G    A+ L REM    +ME                  
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSME------------------ 163

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P++ T   VL  C AL  L  G+E+H   +R   A DV V + L+DMYAKCGC++ A  
Sbjct: 164 -PDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWA 222

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VFD   VR+ + WN +I A G +G   E L L +NM AEG     + P  VT ++  +A 
Sbjct: 223 VFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEG-----IAPTIVTLVSAISAA 277

Query: 621 SHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           + +G +  G +L  Y  +  +G +        ++D+  ++G V  A  L + +
Sbjct: 278 ADAGALPRGRELHGYGWRRGFGSQDKLK--TSLLDMYAKSGWVTVARVLFDQL 328


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/674 (35%), Positives = 385/674 (57%), Gaps = 31/674 (4%)

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++  + N L+ MY K GR+  A  +F     R++VSW  ++    QN   LE+++   +M
Sbjct: 5   FDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKM 64

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            L G+KP+  + ++ L AC  L  LD G++IH   ++    + N  VG++++DMY  C  
Sbjct: 65  GLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVN-VVGNSIIDMYSKCGR 123

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     +F+ +  + +  WNAMI GY    + E+AL+LF KM+EV G + +  T +S + 
Sbjct: 124 INEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGG-FLDEFTFTSTLK 182

Query: 395 ACVRSEAFPDKEGIHGHAIKLGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           AC    A  +   IH   I  G     +  V  AL+D+Y + G++ +++ +F  +E +  
Sbjct: 183 ACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHV 242

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           +SW  +I GY   G   +++ L R++        R +   +D  +L       ++M V  
Sbjct: 243 ISWTALILGYAQEGNLAESMELFRQL--------RESSIQVDGFILS------SMMGVFA 288

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                + + +GK++HA+AI+     D+ V ++++DMY KCG +N A R+F  MP RNVI+
Sbjct: 289 D---FALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVIS 345

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W V+I  YG HG G+E + L   M  + +     +P++VT++A+   CSHSG+V +G + 
Sbjct: 346 WTVMITGYGKHGLGKEAIRLFDEMQLDST-----EPDDVTYLAVLLGCSHSGLVEKGQEY 400

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           F ++   +GI+   +HYAC+VDLLGRAG++++A  L++ MP E +  G W +LL ACR+H
Sbjct: 401 FSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEAN-VGIWQTLLSACRVH 459

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            ++E+G+     L  L+ +   +YV++SNIY+ A  W +   +R+ +K   ++KE G SW
Sbjct: 460 GDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSW 519

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE-GYVPDTSCVLHNVNEEEKETLL 811
           +E   E+H F  GD +H  +E++H  L+ +  RM++E GYV      LH+V EE K   L
Sbjct: 520 VEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNL 579

Query: 812 CGHSEKLAIAFGIL--NTPPG-TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             HSEKLAI   ++      G   IRV KNLRVC DCH+  K +SKI     ++RD  RF
Sbjct: 580 RVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRF 639

Query: 869 HHFKNGTCSCGDYW 882
           H F++G CSC DYW
Sbjct: 640 HRFEDGLCSCRDYW 653



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 260/503 (51%), Gaps = 36/503 (7%)

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           G+G   + ++N L+ MYGKCG  +     VFDR+ +++ VSW +++    + G    +L 
Sbjct: 2   GFGFD-LMLSNDLIVMYGKCGR-LGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLL 59

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
            F  M  S V+P+ FT  +   AC  L   +GL +GRQ+H   ++ G +    + N+++ 
Sbjct: 60  LFSKMGLSGVKPNDFTFSTNLKACGLL---NGLDIGRQIHDICVKTGFDMVNVVGNSIID 116

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY+K GR+++A  +F+    R+L+SWN +++  +      +A++  ++M   G   D  +
Sbjct: 117 MYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFT 176

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRRVFDF 344
             S L ACS L  +  G +IHA+ +    L   N+ V  AL+D+Y  C ++   RRVF  
Sbjct: 177 FTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH 236

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I +K +  W A+I GY Q     E++ LF ++ E + +  +   +SS++           
Sbjct: 237 IEEKHVISWTALILGYAQEGNLAESMELFRQLRE-SSIQVDGFILSSMMGVFADFALVQQ 295

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + +H  AIK+  G D  V N+++DMY + G I  ++ +F +M  R+ +SW  MITGY  
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGY-- 353

Query: 465 CGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            G+HG   +A+ L  EMQ             LD T    +P+ +T + VL GC     + 
Sbjct: 354 -GKHGLGKEAIRLFDEMQ-------------LDST----EPDDVTYLAVLLGCSHSGLVE 395

Query: 522 KGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           KG+E  +     + +   V   + +VD+  + G L  A+ + D MP+  NV  W  ++ A
Sbjct: 396 KGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA 455

Query: 580 YGMHGE---GQEVLELLKNMVAE 599
             +HG+   G+EV  +L  + +E
Sbjct: 456 CRVHGDLELGKEVGGILLRLDSE 478



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 222/438 (50%), Gaps = 27/438 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++    E++L + +M  S ++P++F F   LKA   +  L +G+QIH   
Sbjct: 40  SWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDIC 99

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+ + +V V N++++MY KCG  + +   +F+ +  ++ +SWN+MIA     G  + 
Sbjct: 100 VKTGFDMVNV-VGNSIIDMYSKCGR-INEAACMFEVMPVRNLISWNAMIAGYTVAGFCEK 157

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG---EWNTFIM 220
           AL  F+ M         FT  S   ACS+L     ++ G Q+H   +  G     NT + 
Sbjct: 158 ALVLFQKMQEVGGFLDEFTFTSTLKACSDLG---AIKEGNQIHAFLITGGFLYSVNTAVA 214

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+ +Y K G++  A+ +F   E++ ++SW  ++   +Q     E++   RQ+    I+
Sbjct: 215 GALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQ 274

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            DG  ++S++   +   ++  GK++HA+A++    +D S V ++++DMY  C  +    R
Sbjct: 275 VDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDIS-VCNSILDMYLKCGMINEAER 333

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS- 399
           +F  +  + +  W  MITGYG++   +EA+ LF +M ++    P+  T  +V+  C  S 
Sbjct: 334 LFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEM-QLDSTEPDDVTYLAVLLGCSHSG 392

Query: 400 ------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                 E F      HG   ++    + Y    ++D+  R GR++ +K + D M +   V
Sbjct: 393 LVEKGQEYFSRLCSYHGIKARV----EHYA--CMVDLLGRAGRLKEAKNLVDSMPLEANV 446

Query: 454 S-WNTMITGYTICGQHGD 470
             W T+++    C  HGD
Sbjct: 447 GIWQTLLSA---CRVHGD 461



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 22/215 (10%)

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           +G G D  + N L+ MY + GR+ ++  +FD M  R+ VSW  ++ G+   G   ++L+L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             +M                  +   KPN  T  T L  CG L+ L  G++IH   ++  
Sbjct: 61  FSKM-----------------GLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTG 103

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
                VVG++++DMY+KCG +N A  +F++MPVRN+I+WN +I  Y + G  ++ L L +
Sbjct: 104 FDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQ 163

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
            M   G        +E TF +   ACS  G + EG
Sbjct: 164 KMQEVGGF-----LDEFTFTSTLKACSDLGAIKEG 193


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 282/847 (33%), Positives = 438/847 (51%), Gaps = 69/847 (8%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P++ +    L   +   D  L K +HA ++K         ++N L++ Y K       
Sbjct: 60  LPPESHSLLHALHVSSRSGDTHLAKTVHATLLKRDE--EDTHLSNALISTYLKLNL-FPH 116

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACS 191
             ++F  +   + VS+ ++I+ L +  +   AL  F RM   S++ P+ +T V+V  ACS
Sbjct: 117 ALRLFLSLPSPNVVSYTTLISFLSKH-RQHHALHLFLRMTTRSHLPPNEYTYVAVLTACS 175

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +L        G Q+H  +L+   +++ F+ NAL+++YAK      A  LF     RD+ S
Sbjct: 176 SLLHH--FHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIAS 233

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           WNTI+S+  Q+  +  A    R M A    + D  +++ +L A + L     G+++HA+A
Sbjct: 234 WNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLM---EGQQVHAHA 290

Query: 310 ----LRNDILIDNSFVG--------------------------SALVDMYCNCREVECGR 339
               L  D+ + N  +G                          + +V  Y     V    
Sbjct: 291 VKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLAL 350

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           +VFD + +K    +N ++ G+ +NE   EA+ LF++M E  GL     +++SVV AC   
Sbjct: 351 KVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVE-EGLELTDFSLTSVVDACGLL 409

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD--TVSWNT 457
             +   + +HG A+K G G + YV+ AL+DMY+R GR+  +  +F   E+ +  +V W  
Sbjct: 410 GDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTA 469

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI GY   GQ  +A+ L              +V   D  V+    + +   ++L  CG +
Sbjct: 470 MICGYARNGQPEEAIYLF-------------HVGRSDGKVIM---DEVAAASMLGLCGTI 513

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
             L  GK+IH + I+  L  ++ VG+A+V MY KCG ++ A +VF  MP  +++TWN +I
Sbjct: 514 GHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLI 573

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM--VSEGMDLFYK 635
               MH +G   LE+   M+ EG     +KPN+VTF+ + +A   + +  V +  +LF  
Sbjct: 574 SGNLMHRQGDRALEIWVEMLGEG-----IKPNQVTFVLIISAYRQTNLNLVDDCRNLFNS 628

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M+  Y IEP+  HYA  + +LG  G +++A + IN MP +   A  W  LL  CR+H+N 
Sbjct: 629 MRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQ-PSALVWRVLLDGCRLHKNE 687

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
            IG+ AAQN+  LEP   S ++L+SN+YS++  WD++  VR+ M+E G RK P  SWI  
Sbjct: 688 LIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVC 747

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
             +I+ F   D SH Q + +   LE L     K GY PDTS VLH V E  K+  L  HS
Sbjct: 748 EKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHS 807

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
            KLA  +GIL T PG  IR+ KN+ +C DCH   K+ S +  R+I LRD   FH F NG 
Sbjct: 808 AKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQ 867

Query: 876 CSCGDYW 882
           CSC D W
Sbjct: 868 CSCKDCW 874



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 272/618 (44%), Gaps = 113/618 (18%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAV 83
           P      L LP        + I S  S+ R +    A+  ++ MT RS + P+ + + AV
Sbjct: 115 PHALRLFLSLPSPNVVSYTTLI-SFLSKHRQHH---ALHLFLRMTTRSHLPPNEYTYVAV 170

Query: 84  LKAVAG-IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           L A +  +     G Q+HA  +K  +   S  VAN LV++Y K  S      K+F++I  
Sbjct: 171 LTACSSLLHHFHFGLQLHAAALKTAH-FDSPFVANALVSLYAKHAS-FHAALKLFNQIPR 228

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRL 201
           +D  SWN++I+   +   +D A   FR M  ++      FTL  +  A ++L        
Sbjct: 229 RDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME------ 282

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW--------- 251
           G+QVH +++++G E +  + N L+  Y+K G VDD + LF+    RD+++W         
Sbjct: 283 GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYME 342

Query: 252 ----------------------NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
                                 NT+++   +N++  EA+    +M   G++    S+ SV
Sbjct: 343 FGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSV 402

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC-REVECGRRVFDF-ISD 347
           + AC  L      K++H +A++      N +V +AL+DMY  C R V+ G+    + + +
Sbjct: 403 VDACGLLGDYKVSKQVHGFAVKFG-FGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEE 461

Query: 348 KKIALWNAMITGYGQNEYDEEALMLF--------IKMEEVAGLWPNATTMSSVVPACVRS 399
               +W AMI GY +N   EEA+ LF        + M+EVA         +S++  C   
Sbjct: 462 FSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAA--------ASMLGLCGTI 513

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                 + IH H IK GLG +  V NA++ MY + G ++ +  +F DM   D V+WNT+I
Sbjct: 514 GHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLI 573

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
           +G  +  Q   AL +  EM              L E +   KPN +T + +         
Sbjct: 574 SGNLMHRQGDRALEIWVEM--------------LGEGI---KPNQVTFVLI--------- 607

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNVIIM 578
                 I AY   N+          LVD    C    N  R V+ + P      +   I 
Sbjct: 608 ------ISAYRQTNL---------NLVD---DCRNLFNSMRTVYQIEPTSR--HYASFIS 647

Query: 579 AYGMHGEGQEVLELLKNM 596
             G  G  QE LE + NM
Sbjct: 648 VLGHWGLLQEALETINNM 665


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/659 (37%), Positives = 370/659 (56%), Gaps = 59/659 (8%)

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           I+    Q ++  EAV +L ++     +P     ++++ AC     L+ GK +HA+   ++
Sbjct: 38  IIELFCQQNRLKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASN 93

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG--------QNEY 365
             I    + + L+ MY  C  +   + +FD I  K +  WN MI+GY         +  +
Sbjct: 94  -FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLF 152

Query: 366 DE-----------------------EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           DE                       EAL LF  M+E      N  T+SS + A     + 
Sbjct: 153 DEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSL 212

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IHG+ I+ GL  D  V  AL+D+Y + G +  ++ IFD M  +D VSW TMI   
Sbjct: 213 RRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRC 272

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G+  +   L R               DL  + +RP  N  T   VL  C  L+A   
Sbjct: 273 FEDGRKKEGFSLFR---------------DLMGSGVRP--NEYTFAGVLNACADLAAEQM 315

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GKE+H Y  R          SALV +Y+KCG    ARRVF+ MP  ++++W  +I+ Y  
Sbjct: 316 GKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQ 375

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +G+    L+  ++++  G+     KP+E+TF+ + +AC+H+G+V  G++ F+ +K+ +G+
Sbjct: 376 NGQPDMALQFFESLLRSGT-----KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGL 430

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
             + DHYACV+DLL R+G+ ++A  +I+ MP + DK   W+SLLG CRIH N+E+ E AA
Sbjct: 431 VHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKF-LWASLLGGCRIHGNIELAERAA 489

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + LF LEP+  + Y+ LSNIY++A LW +   VR  M   G+ K+PG SWIE   ++H F
Sbjct: 490 KALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVF 549

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           L GD SH +   +H +L  LS++M++EGYV DT+ VLH+V EE+KE  +  HSEKLA+AF
Sbjct: 550 LVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAF 609

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           GI++T PGT I+V KNLR C DCH A K+ISKI  R+II+RD  RFH F +G+CSC DY
Sbjct: 610 GIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 226/473 (47%), Gaps = 55/473 (11%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           + N+ +EA+  Y+       QP    +  ++ A    + L LGK++HAH     + +  +
Sbjct: 44  QQNRLKEAV-DYLHRIP---QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNF-IPGI 98

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK------------- 160
            ++N L++MY KCGS + D   +FD I +KD  SWN+MI+     G+             
Sbjct: 99  VISNRLIHMYAKCGS-LVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157

Query: 161 -----WDL-------------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
                W+              AL+ FRMM     E S+  + +++ A +  +    LR G
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMM--QENESSNCNMFTLSSALAAAAAISSLRRG 215

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           +++HG  +R G E +  +  AL+ +Y K G +++A+ +F    D+D+VSW T++    ++
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFED 275

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN-SF 320
            +  E     R +   G++P+  + A VL AC+ L     GKE+H Y  R  +  D  SF
Sbjct: 276 GRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR--VGYDPFSF 333

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
             SALV +Y  C   E  RRVF+ +    +  W ++I GY QN   + AL  F  +   +
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR-S 392

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG----RDRYVQNALMDMYSRMGR 436
           G  P+  T   V+ AC  +    D    + H++K   G     D Y    ++D+ +R GR
Sbjct: 393 GTKPDEITFVGVLSACTHA-GLVDIGLEYFHSVKEKHGLVHTADHYA--CVIDLLARSGR 449

Query: 437 IEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            + ++ I D+M ++ D   W +++ G   C  HG+  +  R  + + E +  N
Sbjct: 450 FKEAENIIDNMPMKPDKFLWASLLGG---CRIHGNIELAERAAKALFELEPEN 499



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 220/509 (43%), Gaps = 72/509 (14%)

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVD 234
           +PS     ++  AC    R   L LG++VH ++ +   +     I N L+ MYAK G + 
Sbjct: 60  QPSPRLYSTLIAACL---RHRKLELGKRVHAHT-KASNFIPGIVISNRLIHMYAKCGSLV 115

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           DA+ LF     +DL SWNT++S  +   +  +A     +M  R        I+  +    
Sbjct: 116 DAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGW 175

Query: 295 HLEMLD--------------------------------TGKEIHAYALRNDILIDNSFVG 322
           ++E LD                                 GKEIH Y +R+ + +D   V 
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELD-EVVW 234

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           +AL+D+Y  C  +   R +FD ++DK I  W  MI    ++   +E   LF  +   +G+
Sbjct: 235 TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMG-SGV 293

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T + V+ AC    A    + +HG+  ++G     +  +AL+ +YS+ G  E ++ 
Sbjct: 294 RPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARR 353

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP-- 500
           +F+ M   D VSW ++I GY   GQ   AL                      E++LR   
Sbjct: 354 VFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFF-------------------ESLLRSGT 394

Query: 501 KPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           KP+ IT + VL  C     +  G E  H+   ++ L       + ++D+ A+ G    A 
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAE 454

Query: 560 RVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALF 617
            + D MP++ +   W  ++    +HG  +      K +        E++P N  T+I L 
Sbjct: 455 NIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALF-------ELEPENPATYITLS 507

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
              +++G+ +E   +   M D+ GI   P
Sbjct: 508 NIYANAGLWTEETKVRNDM-DNRGIVKKP 535



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 37/250 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +       + +E    + ++  S ++P+ + F  VL A A +    +GK++H ++
Sbjct: 264 SWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYM 323

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + GY   S   A+ LV++Y KCG +     +VF+++   D VSW S+I    + G+ D+
Sbjct: 324 TRVGYDPFSFA-ASALVHVYSKCG-NTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM 381

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL+ F  +L S  +P   T V V  AC+              H   + +G      +   
Sbjct: 382 ALQFFESLLRSGTKPDEITFVGVLSACT--------------HAGLVDIG------LEYF 421

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
            ++  K G V  A              +  ++  L+++ +F EA   +  M +   KPD 
Sbjct: 422 HSVKEKHGLVHTAD------------HYACVIDLLARSGRFKEAENIIDNMPM---KPDK 466

Query: 284 VSIASVLPAC 293
              AS+L  C
Sbjct: 467 FLWASLLGGC 476


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/612 (39%), Positives = 359/612 (58%), Gaps = 31/612 (5%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC---NCREVECGRRVFDFI 345
           +L  CS++E L   ++IH   L+  +++D   + ++ +  +C   N   +   R VFD I
Sbjct: 24  LLQRCSNMEEL---RQIHGQMLKTGLILDE--IPASKLLAFCASPNSGSLAYARTVFDRI 78

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                 +WN MI GY  ++  EEAL+L+  M     +  NA T   ++ AC    A  + 
Sbjct: 79  FRPNTFMWNTMIRGYSNSKEPEEALLLYHHML-YHSVPHNAYTFPFLLKACSSMSALEET 137

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + IH H IK+G G + Y  N+L+++YS+ G I+ ++ +FD ++ RDTVSWN+MI GYT C
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197

Query: 466 GQHGDALMLLREMQNME---------------EEKNRNNVYDLDETVLRPKPNSITLMTV 510
           G+   A  +   M                   + K   N++   +T    K +++ L++ 
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA-GIKLDNVALVST 256

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C  L  L +GK IHAY  ++ +  D ++G  L+DMYAKCG L  A  VF  M  + V
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
             W  +I  Y +HG G+E LE    M   G     V+PN++TF  +  ACSH+G+V E  
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAG-----VEPNQMTFTGILTACSHAGLVHEAK 371

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            LF  M+  +G +PS +HY C+VDLLGRAG +++A +LI  MP +   A  W +LL AC 
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK-PNAAIWGALLNACH 430

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH N+E+G+   + L  ++P     Y+ L++I+++A  W++A  VR++MKE GV K PGC
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S I      H+FLAGD SH Q +++   LE + ER+R+EGY P    +L ++ ++EKET 
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETA 550

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           +  HSEKLA+ FG+++T PG TIR+ KNLRVC DCH   K ISK+ +REI++RD  RFH 
Sbjct: 551 IHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHL 610

Query: 871 FKNGTCSCGDYW 882
           FK+G C+CGDYW
Sbjct: 611 FKDGNCTCGDYW 622



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 54/414 (13%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIH  ++K G  L  +  +  L          +     VFDRI   +   WN+MI    
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
              + + AL  +  MLY +V  +++T   +  ACS++S    L   +Q+H + +++G  +
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMS---ALEETQQIHAHIIKMGFGS 151

Query: 217 -TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ--------------- 260
             +  N+L+ +Y+K G +  A+ LF   + RD VSWN+++   ++               
Sbjct: 152 EIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP 211

Query: 261 ----------------NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                             K  EA+    +M   GIK D V++ S L AC+ L +LD GK 
Sbjct: 212 ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKW 271

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHAY  +++I ID   +G  L+DMY  C ++E    VF  + +K +++W AMI+GY  + 
Sbjct: 272 IHAYIKKHEIEID-PILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----EA---FPDKEGIHGHAIKLGL 417
              EAL  F+KM + AG+ PN  T + ++ AC  +    EA   F   E IHG    +  
Sbjct: 331 RGREALEWFMKM-QTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI-- 387

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
             + Y    ++D+  R G ++ ++ + ++M V+   + W  ++     C  HG+
Sbjct: 388 --EHY--GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA---CHIHGN 434



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 37/291 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S +  EA+L Y  M    +  + + FP +LKA + +  L   +QIHAH++
Sbjct: 86  WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHII 145

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S +   N+L+N+Y K G D+     +FD++ ++D VSWNSMI    + G+ ++A
Sbjct: 146 KMGFG-SEIYTTNSLLNVYSKSG-DIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMA 203

Query: 165 LEAFRMM--------------------------LYSNVEPSSFTLVSVAL-----ACSNL 193
            E F  M                          L+  ++ +   L +VAL     AC++L
Sbjct: 204 YEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADL 263

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
              D    G+ +H    +   E +  +   L+ MYAK G +++A  +F+  E++ +  W 
Sbjct: 264 GVLDQ---GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            ++S  + + +  EA+ +  +M   G++P+ ++   +L ACSH  ++   K
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 188/442 (42%), Gaps = 62/442 (14%)

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYA--KLGRVDDAKTLFKSFEDR 246
           CSN+         RQ+HG  L+ G   +    + L+A  A    G +  A+T+F      
Sbjct: 28  CSNMEEL------RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           +   WNT++   S + +  EA++    M    +  +  +   +L ACS +  L+  ++IH
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIH 141

Query: 307 AYALR----NDILIDNSFVG--------------------------SALVDMYCNCREVE 336
           A+ ++    ++I   NS +                           ++++D Y  C E+E
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIE 201

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+ + ++ I  W +MI+G       +EAL LF +M + AG+  +   + S + AC
Sbjct: 202 MAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM-QTAGIKLDNVALVSTLQAC 260

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + IH +  K  +  D  +   L+DMY++ G +E +  +F  ME +    W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+GY I G+  +AL    +MQ    E                 PN +T   +L  C  
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVE-----------------PNQMTFTGILTACSH 363

Query: 517 LSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
              + + K +     R +     +     +VD+  + G L  A  + + MPV+ N   W 
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 423

Query: 575 VIIMAYGMHGE---GQEVLELL 593
            ++ A  +HG    G+++ ++L
Sbjct: 424 ALLNACHIHGNLELGKQIGKIL 445



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 47/275 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + + +EA+  +  M  + I+ DN A  + L+A A +  L  GK IHA++
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 276

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+   +  + +   L++MY KCG D+ +  +VF ++ EK    W +MI+     G+   
Sbjct: 277 KKHEIEIDPI-LGCVLIDMYAKCG-DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE F  M  + VEP+  T   +  ACS+                               
Sbjct: 335 ALEWFMKMQTAGVEPNQMTFTGILTACSH------------------------------- 363

Query: 224 MAMYAKLGRVDDAKTLFKSFE-----DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                  G V +AK LF+S E        +  +  +V  L +     EA   +  M    
Sbjct: 364 ------AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP--- 414

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +KP+     ++L AC     L+ GK+I    ++ D
Sbjct: 415 VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVD 449


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/537 (41%), Positives = 319/537 (59%), Gaps = 27/537 (5%)

Query: 352 LWNAMITGYGQNEYD-----EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           LWN +I  + Q            + +F++M    G+ P+  T   ++ +           
Sbjct: 26  LWNTLIRAHVQARAQPTGPTHSPISIFVRMR-FHGVQPDFHTFPFLLQSFASPSLLHLGR 84

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   ++ GL  D +VQ +L+ MYS  G +++++ +F  M  R+ +SW+ MI GY  CG
Sbjct: 85  SVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCG 144

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q+ +AL L REMQ +      N+V          +PN  T+  VL  CG L AL  GK  
Sbjct: 145 QYKEALALFREMQML----GVNDV----------RPNEFTMSGVLAACGRLGALEHGKWA 190

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMAYGMHGE 585
           HAY  +  +  DVV+G+AL+DMYAKCG +  A  VF +L P ++V+ W+ +I    MHG 
Sbjct: 191 HAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGL 250

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E + L   M+ +G     V+PN VTF+A+F AC H G+VSEG D   +M +DY I P+
Sbjct: 251 AEECVGLFSKMINQG-----VRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPT 305

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY C+VDL GRAG++++A+ ++  MP E D    W +LL   R+H ++E  E+A + L
Sbjct: 306 IQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVL-VWGALLSGSRMHGDIETCELALKKL 364

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             LEP  +  YVLLSN+Y+    W+    VR  M+ MG++K PGCS IE G  +H+F  G
Sbjct: 365 IELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVG 424

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH ++ Q+H  LE + ER++ EGYV +T  VL +++EE KE  L  HSEKLA+A+G L
Sbjct: 425 DDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFL 484

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            T PGT IR+ KNLR+C DCH A K ISK+  REII+RD  RFHHF  G CSC DYW
Sbjct: 485 KTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 24/337 (7%)

Query: 148 WNSMI-----ATLCRFGKWDLALEAFRMMLYSNVEPS--SFTLVSVALACSNLSRRDGLR 200
           WN++I     A     G     +  F  M +  V+P   +F  +  + A  +L     L 
Sbjct: 27  WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL-----LH 81

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           LGR VH   LR G   + F+  +L++MY+  G VD A+ LF    +R+++SW+ +++   
Sbjct: 82  LGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYV 141

Query: 260 QNDKFLEAVMFLRQMALRG---IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           +  ++ EA+   R+M + G   ++P+  +++ VL AC  L  L+ GK  HAY  +  + +
Sbjct: 142 RCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV 201

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIK 375
           D   +G+AL+DMY  C  VE    VF  +  +K +  W+AMI+G   +   EE + LF K
Sbjct: 202 D-VVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 260

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           M    G+ PNA T  +V  ACV      + K+ +        +         ++D+Y R 
Sbjct: 261 MIN-QGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRA 319

Query: 435 GRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           GRI+ +  +   M +  D + W  +++G  +   HGD
Sbjct: 320 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRM---HGD 353



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 16/323 (4%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           ++ M    +QPD   FP +L++ A    L LG+ +HA ++++G  +    V  +L++MY 
Sbjct: 52  FVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPF-VQTSLISMYS 110

Query: 125 KCG-SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR---MMLYSNVEPSS 180
             G  DM     +F  + E++ +SW+ MI    R G++  AL  FR   M+  ++V P+ 
Sbjct: 111 SSGLVDM--ARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           FT+  V  AC  L     L  G+  H    + G   +  +  AL+ MYAK G V+ A  +
Sbjct: 169 FTMSGVLAACGRLG---ALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWV 225

Query: 240 FKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           F +   ++D+++W+ ++S L+ +    E V    +M  +G++P+ V+  +V  AC H  +
Sbjct: 226 FSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGL 285

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDFISDKKIALWNAMI 357
           +  GK+       +  +I        +VD+Y     + E    V     +  + +W A++
Sbjct: 286 VSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALL 345

Query: 358 TG---YGQNEYDEEALMLFIKME 377
           +G   +G  E  E AL   I++E
Sbjct: 346 SGSRMHGDIETCELALKKLIELE 368


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/666 (36%), Positives = 371/666 (55%), Gaps = 29/666 (4%)

Query: 219 IMNALMAMYAKLGRVDDAK-TLFKSFEDRDLV-SWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           +  +L A YA++G +D A+ TL  S   R  + +WN ++++ S+      A+   R +  
Sbjct: 46  LFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALP- 104

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
              +PD  +    L AC+ L  LD  + +   A       D  FV SAL+ +Y  C  + 
Sbjct: 105 SSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRD-VFVCSALLHVYSRCGAMG 163

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              RVFD +  K    W+ M+ G+       EAL ++ +M E  G+  +   M  V+ AC
Sbjct: 164 DAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMRE-HGVAEDEVVMVGVIQAC 222

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
             +        +HG  ++ G+  D  +  +L+DMY++ G  ++++ +F  M  R+ VSWN
Sbjct: 223 TLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWN 282

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            +I+G+   G   +AL L REM     +                 P+S  L++ L  C  
Sbjct: 283 ALISGFAQNGHADEALDLFREMSTSGLQ-----------------PDSGALVSALLACAD 325

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           +  L  GK IH + +R  L    ++G+A++DMY+KCG L  AR++F+ +  R+++ WN +
Sbjct: 326 VGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAM 384

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I   G HG G + L L + +   G     +KP+  TF +L +A SHSG+V EG   F +M
Sbjct: 385 IACCGTHGCGHDALALFQELNETG-----IKPDHATFASLLSALSHSGLVEEGKFWFDRM 439

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             ++GIEP+  H  CVVDLL R+G VE+A +++  M  E      W +LL  C  ++ +E
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTE-PTIPIWVALLSGCLNNKKLE 498

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +GE  A+ +   +P+      L+SN+Y++A+ WDK  ++RK MK+ G +K PG S IE  
Sbjct: 499 LGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVH 558

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
              H F+  D SH Q +++   +  LS  MRK GYVP T  V H+++E+ KE LL  HSE
Sbjct: 559 GTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSE 618

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           +LAIAFG+LNT PGT + + KNLRVC DCH A K+ISKI  REI++RD +RFHHFK+G C
Sbjct: 619 RLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGAC 678

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 679 SCGDYW 684



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 225/464 (48%), Gaps = 15/464 (3%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFRE 60
           + SS+Q   L PS   +  +     A  +T    P S++ C  +W   L + +R+     
Sbjct: 39  VVSSSQ--NLFPSLAAAYARVGALDAAESTLAASPSSRS-CIPAWNALLAARSRAGS-PG 94

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A L       S  +PD+  F   L A A + DL   + +       GYG   V V + L+
Sbjct: 95  AALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYG-RDVFVCSALL 153

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           ++Y +CG+ M D  +VFD +  KD V+W++M+A     G+   AL  +  M    V    
Sbjct: 154 HVYSRCGA-MGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDE 212

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
             +V V  AC+        R+G  VHG  LR G   +  I  +L+ MYAK G  D A+ +
Sbjct: 213 VVMVGVIQACTLTG---NTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQV 269

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+    R+ VSWN ++S  +QN    EA+   R+M+  G++PD  ++ S L AC+ +  L
Sbjct: 270 FRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFL 329

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             GK IH + LR   L     +G+A++DMY  C  +E  R++F+ +S + + LWNAMI  
Sbjct: 330 KLGKSIHGFILRR--LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIAC 387

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI-KLGLG 418
            G +    +AL LF ++ E  G+ P+  T +S++ A   S    + +      I + G+ 
Sbjct: 388 CGTHGCGHDALALFQELNET-GIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIE 446

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITG 461
                   ++D+ +R G +E +  +   M    T+  W  +++G
Sbjct: 447 PTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/762 (33%), Positives = 401/762 (52%), Gaps = 111/762 (14%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           M+G+ G  +    ++FD I ++D  SW  M++   R G  DL+                 
Sbjct: 1   MFGRLGC-VERARQIFDAIADRDSFSWGIMLSIYARSG--DLS----------------- 40

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFK 241
                                    G   R+  W+     AL++ +A  G  ++AKTLF 
Sbjct: 41  ----------------------NAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFD 78

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           + ++RDL++W  +++ L+      +A     QM  R    D V+  ++L A +    ++ 
Sbjct: 79  TMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPER----DLVAWTAMLAANAERGQMEN 134

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
            +E       + +   N F  ++L+  Y    +V+   RVFD + +  +  W AM+TGY 
Sbjct: 135 ARETF-----DQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYS 189

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
            +                            VV A    ++ P+              RD 
Sbjct: 190 LS--------------------------GDVVRAKRAFDSMPE--------------RDL 209

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
               A++  Y+  G +  ++ IF  M  RD +SW TM+          D   LL E + +
Sbjct: 210 IAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALV----END---LLEESKEL 262

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
            +   R+       T     PN +T +T+L  C  L ALA+G++IHA        TD+VV
Sbjct: 263 FDRMPRHCALSKGMT-----PNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVV 317

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +ALV+ Y +CG L  A+ VFD M  R+VI+W+ +I A+   G   E +EL   M++EG+
Sbjct: 318 SNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGT 377

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                 P+++ FI++  ACS+SG+V    D F  +  D  +EP+ +HYAC+VD+LGRAGK
Sbjct: 378 -----LPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGK 432

Query: 662 VEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           + DA  L+ +MP  F      + ++L AC+++ +VE GE AA+ +F L+P+ +S Y+ L+
Sbjct: 433 LRDAEDLLRLMP--FHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLA 490

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           NIYS+A+    A  +RK M+E G++K+PGCSWIE  D +H+F+AGD  H Q ++++  ++
Sbjct: 491 NIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQ 550

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L  +M++ GY  DT  VL +V E+EKE LL  HSEKLAIAFG+++TPPG  +R+ KNLR
Sbjct: 551 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 610

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC+DCH ATK ISK+  REI++RD  RFHHF+NG CSC DYW
Sbjct: 611 VCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P+   F  +L A + +  L+ G++IHA V + G+  + + V+N LVN YG+CG+ + D
Sbjct: 276 MTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD-TDLVVSNALVNFYGRCGA-LGD 333

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              VFD +  +D +SW+SMI+   + G+ D A+E +  ML     P     +SV  ACSN
Sbjct: 334 AKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN 393


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 350/592 (59%), Gaps = 25/592 (4%)

Query: 293 CSHLEMLDT--GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
           C+HL  + +  G    A A+   +   N    + L++ Y    ++   R+VFD + D+K+
Sbjct: 82  CNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL 141

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             WNAMI G  Q E++EE L LF +M  + G  P+  T+ SV        +    + IHG
Sbjct: 142 TTWNAMIAGLIQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHG 200

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           + IK GL  D  V ++L  MY R G+++  + +   M VR+ V+WNT+I G    G    
Sbjct: 201 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 260

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
            L L + M+                 +   +PN IT +TVL  C  L+   +G++IHA A
Sbjct: 261 VLYLYKMMK-----------------ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEA 303

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           I+   ++ V V S+L+ MY+KCGCL  A + F      + + W+ +I AYG HG+G E +
Sbjct: 304 IKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAI 363

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           EL   M  + +    ++ NEV F+ L  ACSHSG+  +G++LF  M + YG +P   HY 
Sbjct: 364 ELFNTMAEQTN----MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYT 419

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           CVVDLLGRAG ++ A  +I  MP + D    W +LL AC IH+N E+ +   + +  ++P
Sbjct: 420 CVVDLLGRAGCLDQAEAIIRSMPIKTDIV-IWKTLLSACNIHKNAEMAQRVFKEILQIDP 478

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
           + ++ YVLL+N+++SA+ W    +VRK M++  V+KE G SW E   E+H+F  GD S  
Sbjct: 479 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 538

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           +S++++ +L+ L+  M+ +GY PDT+ VLH+++EEEKE+ L  HSEKLA+AF ++  P G
Sbjct: 539 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 598

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             IR+ KNLRVC+DCH A K+IS I++REI LRD  RFHHF NG CSCGDYW
Sbjct: 599 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 219/507 (43%), Gaps = 74/507 (14%)

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
           + IATLC  G    A + FR+ +++N   S FT      +C+    R  L  G+Q+H   
Sbjct: 18  TAIATLCSKGNLREAFQRFRLNIFTNT--SLFT--PFIQSCTT---RQSLPSGKQLHCLL 70

Query: 210 LRVG-EWNTFIMNALMAMYAKLG----------------------------RVDD---AK 237
           +  G   + FI N LM+MY+KLG                            R  D   A+
Sbjct: 71  VVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNAR 130

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F    DR L +WN +++ L Q +   E +   R+M   G  PD  ++ SV    + L 
Sbjct: 131 KVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLR 190

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            +  G++IH Y ++  + +D   V S+L  MY    +++ G  V   +  + +  WN +I
Sbjct: 191 SVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 249

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            G  QN   E  L L+ KM +++G  PN  T  +V+ +C         + IH  AIK+G 
Sbjct: 250 MGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
                V ++L+ MYS+ G +  +   F + E  D V W++MI+ Y   GQ  +A+ L   
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF-- 366

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-----IHAYAIR 532
              M E+ N              + N +  + +L  C       KG E     +  Y  +
Sbjct: 367 -NTMAEQTNM-------------EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 412

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE 591
             L     V    VD+  + GCL+ A  +   MP++ +++ W  ++ A  +H   +    
Sbjct: 413 PGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 468

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFA 618
           + K ++       ++ PN+     L A
Sbjct: 469 VFKEIL-------QIDPNDSACYVLLA 488



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 212/457 (46%), Gaps = 55/457 (12%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
            REA   +    R +I  +   F   +++    Q L  GKQ+H  +V  G+  S   + N
Sbjct: 29  LREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFS-SDKFICN 83

Query: 118 TLVNMYGKCG------------------------------SDMWDVYKVFDRITEKDQVS 147
            L++MY K G                               D+ +  KVFD + ++   +
Sbjct: 84  HLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT 143

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR---LGRQ 204
           WN+MIA L +F   +  L  FR M      P  +TL SV       S   GLR   +G+Q
Sbjct: 144 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV------FSGSAGLRSVSIGQQ 197

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG +++ G E +  + ++L  MY + G++ D + + +S   R+LV+WNT++   +QN  
Sbjct: 198 IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG- 256

Query: 264 FLEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
             E V++L + M + G +P+ ++  +VL +CS L +   G++IHA A++       + V 
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA-VV 315

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           S+L+ MY  C  +    + F    D+   +W++MI+ YG +   +EA+ LF  M E   +
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 375

Query: 383 WPNATTMSSVVPACVRSEAFPDK--EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
             N     +++ AC  S    DK  E       K G          ++D+  R G ++ +
Sbjct: 376 EINEVAFLNLLYACSHS-GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 434

Query: 441 KTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
           + I   M ++ D V W T+++    C  H +A M  R
Sbjct: 435 EAIIRSMPIKTDIVIWKTLLSA---CNIHKNAEMAQR 468



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 38/355 (10%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           ++ N +  +  + +C   ++ P  + +H   +  G   D+++ N LM MYS++G    + 
Sbjct: 40  IFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAV 99

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------------MEEEKNRN 488
            ++  M  ++ +S N +I GY   G   +A  +  EM +             ++ E N  
Sbjct: 100 AVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEE 159

Query: 489 NVYDLDET-VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
            +    E   L   P+  TL +V  G   L +++ G++IH Y I+  L  D+VV S+L  
Sbjct: 160 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 219

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY + G L     V   MPVRN++ WN +IM    +G  + VL L K M   G R     
Sbjct: 220 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR----- 274

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PN++TF+ + ++CS   +  +G  + +      G        + ++ +  + G + DA +
Sbjct: 275 PNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 333

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH----------------QNVEIGEIAAQNLF 706
             +    E +    WSS++ A   H                 N+EI E+A  NL 
Sbjct: 334 AFS--EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 386



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 8/252 (3%)

Query: 57  QFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           +F E  LS + EM      PD +   +V    AG++ +S+G+QIH + +KYG  L  V V
Sbjct: 155 EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV-V 213

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            ++L +MY + G  + D   V   +  ++ V+WN++I    + G  +  L  ++MM  S 
Sbjct: 214 NSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 272

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
             P+  T V+V  +CS+L+ R     G+Q+H  ++++G      ++++L++MY+K G + 
Sbjct: 273 CRPNKITFVTVLSSCSDLAIRGQ---GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPAC 293
           DA   F   ED D V W++++S+   + +  EA+     MA +  ++ + V+  ++L AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389

Query: 294 SHLEMLDTGKEI 305
           SH  + D G E+
Sbjct: 390 SHSGLKDKGLEL 401


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/713 (35%), Positives = 401/713 (56%), Gaps = 41/713 (5%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R  +Q D+  FP VLK  +   D+  G ++H  V K G+  + V V NTL+ +YG CG
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFD-TDVYVGNTLLMLYGNCG 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA-FRMMLYSNVEPSSFTLVSV 186
             + D  ++FD + E+D VSWN++I  L   G +  A    F M+L S ++P+  +++S+
Sbjct: 60  F-LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISL 118

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
               + L   +   + R++H  S++VG +      NAL+  Y K G V     +F    +
Sbjct: 119 LPISAALEDEE---MTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVE 175

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           ++ VSWN+I++ L+   +  +A+   R M   G +P+ V+I+S+LP    LE    GKEI
Sbjct: 176 KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI 235

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H +++R     D  F+ ++L+DMY           +F  +  + I  WNAMI  Y  N  
Sbjct: 236 HGFSMRMGTETD-IFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRL 294

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
             EA+   I+M+E  G  PNA T ++V+PAC R       + IH   +++GL  D +V N
Sbjct: 295 PLEAIRFVIQMQE-TGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           +L+DMY++ G +  ++ +F+    +D VS+N +I GY+       +L L  EM+      
Sbjct: 354 SLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMR------ 406

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                      +L  KP+ ++ + V+  C  L+AL +GKE+H  A+RN L + + V ++L
Sbjct: 407 -----------LLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSL 455

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           +D Y KCG ++ A R+F+ +  ++V +WN +I+ YGM GE +  + + + M     R   
Sbjct: 456 LDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM-----RDDT 510

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           V+ + V++IA+ +ACSH G+V  G   F +M     +EP+  HY C+VDLLGRAG VE+A
Sbjct: 511 VQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEA 569

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
            +LI  +P   D A  W +LLGACRI+ NVE+G  AA++LF L+P    +Y+LLSNIY+ 
Sbjct: 570 AKLIQQLPIAPD-ANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAE 628

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
              WD+A  +R+ MK  G +K PGCSW++  D++H F+A        E++ GF
Sbjct: 629 TGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVA-------EERVEGF 674



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 180/339 (53%), Gaps = 14/339 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A   +  +A+ ++  M  +  QP++    ++L  +  ++    GK+IH   
Sbjct: 180 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G   + + +AN+L++MY K G    +   +F  +  ++ VSWN+MIA    +    L
Sbjct: 240 MRMGTE-TDIFIANSLIDMYAKSGHST-EASTIFHNLDRRNIVSWNAMIAN---YALNRL 294

Query: 164 ALEAFRMMLY---SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
            LEA R ++    +   P++ T  +V  AC+ L     L  G+++H   +R+G   + F+
Sbjct: 295 PLEAIRFVIQMQETGECPNAVTFTNVLPACARLGF---LGPGKEIHAMGVRIGLTSDLFV 351

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N+L+ MYAK G +  A+ +F +   +D VS+N ++   S+ D  L+++    +M L G 
Sbjct: 352 SNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 410

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           KPD VS   V+ AC++L  L  GKE+H  ALRN  L  + FV ++L+D Y  C  ++   
Sbjct: 411 KPDVVSFVGVISACANLAALKQGKEVHGVALRNH-LYSHLFVSNSLLDFYTKCGRIDIAC 469

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           R+F+ I  K +A WN MI GYG     E A+ +F  M +
Sbjct: 470 RLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRD 508



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 7/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A +    EAI   I+M  +   P+   F  VL A A +  L  GK+IHA  
Sbjct: 281 SWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMG 340

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G   S + V+N+L++MY KCG  +     VF+  + KD+VS+N +I           
Sbjct: 341 VRIGL-TSDLFVSNSLIDMYAKCGC-LHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQ 397

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNA 222
           +L  F  M     +P   + V V  AC+NL+    L+ G++VHG +LR   + + F+ N+
Sbjct: 398 SLNLFSEMRLLGKKPDVVSFVGVISACANLA---ALKQGKEVHGVALRNHLYSHLFVSNS 454

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+  Y K GR+D A  LF     +D+ SWNT++       +   A+     M    ++ D
Sbjct: 455 LLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYD 514

Query: 283 GVSIASVLPACSHLEMLDTG 302
            VS  +VL ACSH  +++ G
Sbjct: 515 LVSYIAVLSACSHGGLVERG 534


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 273/839 (32%), Positives = 426/839 (50%), Gaps = 115/839 (13%)

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF 137
           +   A+   ++ I+ L   +Q H H+V       +  V+  L+N         + V  +F
Sbjct: 2   YELVALASKISNIRQL---RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAY-VDSIF 57

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS-VALACSNLSRR 196
                 D   ++ M+    R G  +  +  F+     N+ P  F  +  + LA  +    
Sbjct: 58  TSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS---- 113

Query: 197 DGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
                G   H   L++G  +  FI NA++ MYAK G+VD A+ LF+   +R L  WN+++
Sbjct: 114 -----GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S   ++    EAV+    M  R                                      
Sbjct: 169 SGCWKSGNETEAVVLFNMMPAR-------------------------------------- 190

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N    +++V  Y    ++E  RR FD + ++ +  WNAM + Y Q E  +EAL LF +
Sbjct: 191 --NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248

Query: 376 MEEVAGLWPNATTMSSVVPAC--------------------VRSEAFPDKEGIHGHAI-- 413
           M E  G+ P+ TT    + +C                    +   +F     +  HA   
Sbjct: 249 MLE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307

Query: 414 ----------KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
                     +LG  R+    N ++  Y+R+G++ +++ +FD+M  RD VSWN+MI GY 
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G+   ++ L +EM                 + +  +P+ +T+ +VL  CG + AL   
Sbjct: 368 QNGESAMSIELFKEMI----------------SCMDIQPDEVTIASVLSACGHIGALKLS 411

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
             +        +   +   ++L+ MY+KCG +  A R+F  M  R+V+++N +I  +  +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G G+E ++L+  M  EG     ++P+ VT+I +  ACSH+G+++EG ++F  ++      
Sbjct: 472 GHGKEAIKLVLTMEEEG-----IEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----A 521

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P+ DHYAC+VDLLGRAG++++A  LI  MP +   AG + SLL A RIH+ V +GE+AA 
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKMLIQSMPMK-PHAGVYGSLLNASRIHKRVGLGELAAS 580

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            LF LEP    +YVLLSNIY+S   W+    VR+ MK+ G++K  G SW+E+  ++HKF 
Sbjct: 581 KLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFT 640

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
            GD SH+QS+ ++  L  L  +M++ G+V D SC L +V EEEKE +L  HSEKLAI F 
Sbjct: 641 VGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFA 700

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +L +  GTTIRV KNLR+C DCH A K ISK+E REI++RD  RFH F  G CSC DYW
Sbjct: 701 LLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 43/302 (14%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW     + A+    +EA+  + +M    I PD+  +   + + + I D +L   I
Sbjct: 221 RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCG-----------------SDMWDVY-------- 134
              + +    L+S  V   L++M+ K G                 +  W++         
Sbjct: 281 LRMIDQKHIVLNSF-VKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVG 339

Query: 135 ------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVA 187
                 ++FD + ++D VSWNSMIA   + G+  +++E F+ M+   +++P   T+ SV 
Sbjct: 340 KLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVL 399

Query: 188 LACSNLSRRDGLRLGRQV----HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            AC ++     L+L   V       ++++G       N+L+ MY+K G V DA  +F++ 
Sbjct: 400 SACGHIG---ALKLSYWVLDIVREKNIKLGISG---FNSLIFMYSKCGSVADAHRIFQTM 453

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             RD+VS+NT++S  + N    EA+  +  M   GI+PD V+   VL ACSH  +L+ GK
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513

Query: 304 EI 305
            +
Sbjct: 514 NV 515


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/612 (39%), Positives = 359/612 (58%), Gaps = 31/612 (5%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC---NCREVECGRRVFDFI 345
           +L  CS++E L   ++IH   L+  +++D   + ++ +  +C   N   +   R VFD I
Sbjct: 24  LLQRCSNMEEL---RQIHGQMLKTGLILDE--IPASKLLAFCASPNSGSLAYARTVFDRI 78

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                 +WN MI GY  ++  EEAL+L+  M     +  NA T   ++ AC    A  + 
Sbjct: 79  FRPNTFMWNTMIRGYSNSKEPEEALLLYHHML-YHSVPHNAYTFPFLLKACSSMSASEET 137

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + IH H IK+G G + Y  N+L+++YS+ G I+ ++ +FD ++ RDTVSWN+MI GYT C
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197

Query: 466 GQHGDALMLLREMQNME---------------EEKNRNNVYDLDETVLRPKPNSITLMTV 510
           G+   A  +   M                   + K   N++   +T    K +++ L++ 
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA-GIKLDNVALVST 256

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C  L  L +GK IHAY  ++ +  D ++G  L+DMYAKCG L  A  VF  M  + V
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
             W  +I  Y +HG G+E LE    M   G     V+PN++TF  +  ACSH+G+V E  
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAG-----VEPNQMTFTGILTACSHAGLVHEAK 371

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            LF  M+  +G +PS +HY C+VDLLGRAG +++A +LI  MP +   A  W +LL AC 
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK-PNAAIWGALLNACH 430

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH N+E+G+   + L  ++P     Y+ L++I+++A  W++A  VR++MKE GV K PGC
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           S I      H+FLAGD SH Q +++   LE + ER+R+EGY P    +L ++ ++EKET 
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETA 550

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           +  HSEKLA+ FG+++T PG TIR+ KNLRVC DCH   K ISK+ +REI++RD  RFH 
Sbjct: 551 IHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHL 610

Query: 871 FKNGTCSCGDYW 882
           FK+G C+CGDYW
Sbjct: 611 FKDGNCTCGDYW 622



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 54/414 (13%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIH  ++K G  L  +  +  L          +     VFDRI   +   WN+MI    
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
              + + AL  +  MLY +V  +++T   +  ACS++S  +  +   Q+H + +++G  +
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQ---QIHAHIIKMGFGS 151

Query: 217 -TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ--------------- 260
             +  N+L+ +Y+K G +  A+ LF   + RD VSWN+++   ++               
Sbjct: 152 EIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP 211

Query: 261 ----------------NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                             K  EA+    +M   GIK D V++ S L AC+ L +LD GK 
Sbjct: 212 ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKW 271

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHAY  +++I ID   +G  L+DMY  C ++E    VF  + +K +++W AMI+GY  + 
Sbjct: 272 IHAYIKKHEIEID-PILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----EA---FPDKEGIHGHAIKLGL 417
              EAL  F+KM + AG+ PN  T + ++ AC  +    EA   F   E IHG    +  
Sbjct: 331 RGREALEWFMKM-QTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI-- 387

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
             + Y    ++D+  R G ++ ++ + ++M V+   + W  ++     C  HG+
Sbjct: 388 --EHY--GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA---CHIHGN 434



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 37/291 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S +  EA+L Y  M    +  + + FP +LKA + +      +QIHAH++
Sbjct: 86  WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHII 145

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+G S +   N+L+N+Y K G D+     +FD++ ++D VSWNSMI    + G+ ++A
Sbjct: 146 KMGFG-SEIYTTNSLLNVYSKSG-DIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMA 203

Query: 165 LEAFRMM--------------------------LYSNVEPSSFTLVSVAL-----ACSNL 193
            E F  M                          L+  ++ +   L +VAL     AC++L
Sbjct: 204 YEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADL 263

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
              D    G+ +H    +   E +  +   L+ MYAK G +++A  +F+  E++ +  W 
Sbjct: 264 GVLDQ---GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            ++S  + + +  EA+ +  +M   G++P+ ++   +L ACSH  ++   K
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 187/442 (42%), Gaps = 62/442 (14%)

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYA--KLGRVDDAKTLFKSFEDR 246
           CSN+         RQ+HG  L+ G   +    + L+A  A    G +  A+T+F      
Sbjct: 28  CSNMEEL------RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           +   WNT++   S + +  EA++    M    +  +  +   +L ACS +   +  ++IH
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIH 141

Query: 307 AYALR----NDILIDNSFVG--------------------------SALVDMYCNCREVE 336
           A+ ++    ++I   NS +                           ++++D Y  C E+E
Sbjct: 142 AHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIE 201

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
               +F+ + ++ I  W +MI+G       +EAL LF +M + AG+  +   + S + AC
Sbjct: 202 MAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM-QTAGIKLDNVALVSTLQAC 260

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                    + IH +  K  +  D  +   L+DMY++ G +E +  +F  ME +    W 
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+GY I G+  +AL    +MQ    E                 PN +T   +L  C  
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVE-----------------PNQMTFTGILTACSH 363

Query: 517 LSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
              + + K +     R +     +     +VD+  + G L  A  + + MPV+ N   W 
Sbjct: 364 AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 423

Query: 575 VIIMAYGMHGE---GQEVLELL 593
            ++ A  +HG    G+++ ++L
Sbjct: 424 ALLNACHIHGNLELGKQIGKIL 445



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 47/275 (17%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + + +EA+  +  M  + I+ DN A  + L+A A +  L  GK IHA++
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 276

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+   +  + +   L++MY KCG D+ +  +VF ++ EK    W +MI+     G+   
Sbjct: 277 KKHEIEIDPI-LGCVLIDMYAKCG-DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGRE 334

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE F  M  + VEP+  T   +  ACS+                               
Sbjct: 335 ALEWFMKMQTAGVEPNQMTFTGILTACSH------------------------------- 363

Query: 224 MAMYAKLGRVDDAKTLFKSFE-----DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                  G V +AK LF+S E        +  +  +V  L +     EA   +  M    
Sbjct: 364 ------AGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP--- 414

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           +KP+     ++L AC     L+ GK+I    ++ D
Sbjct: 415 VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVD 449


>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
 gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
          Length = 870

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 419/742 (56%), Gaps = 40/742 (5%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMWD 132
           +P +     VL   A + D+ +G+ ++ + +K G  L + T+A N LV+MY KCG    D
Sbjct: 127 KPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSG--LDTHTLAGNALVSMYAKCGLVCQD 184

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM---MLYSNVEPSSFTLVSVALA 189
            Y  FD I EKD VSWN++I+    F + +L  +AFR+   ML   ++P+  TL ++   
Sbjct: 185 AYAAFDSIDEKDVVSWNAIISG---FAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPV 241

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           C++         G+++HG  LR  E   + F+ NAL++ Y ++GRV++A+ LF+  E RD
Sbjct: 242 CASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRD 301

Query: 248 LVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           LVSWN I++  + N ++ +A+ +F   + L  I+PD V++  ++PAC+    L  GK IH
Sbjct: 302 LVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIH 361

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
            Y LR+ +L +++ VG+ALV  Y  C ++E     F  IS + +  WN+M+    ++ Y+
Sbjct: 362 GYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYN 421

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY---- 422
              L L   M    G  P++ T+ SVV  CV        +  H ++I+  L   ++    
Sbjct: 422 TWFLELLRWMLS-EGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEP 480

Query: 423 -VQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            + NA++D Y++ G IE +  +F  + E R+ V++  +I+GY  CG   +A +    M +
Sbjct: 481 TIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPS 540

Query: 481 ME------------EEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEI 526
            +            E    +    L   +     KP+++T+M++LP C  ++++   K+ 
Sbjct: 541 SDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQC 600

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H YAIR+    D+ +  AL D+YAKCG + +A ++F L+P +++I +  +I  Y MHG G
Sbjct: 601 HGYAIRSCFG-DLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMG 659

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +E L    +M+  G     +KP+ V    + +ACSH+G+V EG+++FY ++  +G++ + 
Sbjct: 660 KEALGTFFHMIELG-----IKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTM 714

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           + Y+CVVDLL R G+++DA+ ++  MP E + A  W +LLGACR H  VE+G   A  LF
Sbjct: 715 EQYSCVVDLLARGGRIDDAFSMVTGMPIEAN-ANIWGTLLGACRTHHEVELGRFVADRLF 773

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            +E +   +YV+LSN+Y++   WD  M++RK M+   ++K  GCSWIE     + F+AGD
Sbjct: 774 KIEAENIGNYVVLSNLYAADARWDGVMEIRKLMRTRDLKKPAGCSWIEVERRKNVFVAGD 833

Query: 767 GSHQQSEQLHGFLENLSERMRK 788
            SH     ++  L  L+ ++++
Sbjct: 834 TSHPHRIDIYRILSTLNGQIKE 855



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 187/653 (28%), Positives = 314/653 (48%), Gaps = 83/653 (12%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D + D  A  ++LK+ AG+  +  G+ +H  +V+ G+ +S   V+  L+NMY KCG+ + 
Sbjct: 19  DFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGH-VSCHAVSKALLNMYAKCGA-LD 76

Query: 132 DVYKVFDRI---TEKDQVSWNSMIATLCRFGKWDL-ALEAFRMMLYSNV-EPSSFTLVSV 186
           +  K+F  I    ++D + WN +++       +D   L  FR M  +N  +PSS T   V
Sbjct: 77  ESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIV 136

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV-DDAKTLFKSFE 244
              C+ L     + +GR V+  +++ G + +T   NAL++MYAK G V  DA   F S +
Sbjct: 137 LPVCARLG---DVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSID 193

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT--- 301
           ++D+VSWN I+S  ++N+   +A      M    IKP+  ++A++LP C+  +       
Sbjct: 194 EKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWF 253

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GKEIH Y LR++ L+ + FV +ALV  Y     VE    +F  +  + +  WNA+I GY 
Sbjct: 254 GKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYA 313

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRD 420
            N    +AL LF ++  +  + P++ T+  ++PAC +S      + IHG+ ++   L  D
Sbjct: 314 SNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCED 373

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
             V NAL+  Y++   IE +   F  +  RD +SWN+M+      G +   L LLR M  
Sbjct: 374 TSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWM-- 431

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT--- 537
                       L E      P+S+T+++V+  C  +    K KE H+Y+IR+ L     
Sbjct: 432 ------------LSEGT---TPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKF 476

Query: 538 DV--VVGSALVDMYAKCGCLNFARRV--------------------------------FD 563
           DV   +G+A++D YAKCG + +A +V                                F+
Sbjct: 477 DVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFN 536

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            MP  ++  WN+++  Y  +    + L L   + A G     +KP+ VT ++L  AC+  
Sbjct: 537 RMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHG-----IKPDAVTIMSLLPACAEM 591

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHY---ACVVDLLGRAGKVEDAYQLINMMP 673
             V        K    Y I            + D+  + G +  A++L  ++P
Sbjct: 592 ASVQ-----LIKQCHGYAIRSCFGDLHLDGALQDVYAKCGSIGYAFKLFQLIP 639



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 170/608 (27%), Positives = 288/608 (47%), Gaps = 80/608 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS---LGKQIH 100
           SW   +   A +N   +A   +  M +  I+P+      +L   A   +      GK+IH
Sbjct: 199 SWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIH 258

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V+++   L+ V V N LV+ Y + G  + +   +F R+  +D VSWN++IA     G+
Sbjct: 259 GYVLRHNELLADVFVWNALVSFYLRVGR-VEEAELLFRRMELRDLVSWNAIIAGYASNGE 317

Query: 161 WDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR---VGEWN 216
           W  ALE F  +L  + +EP S TL+ +  AC+  SR   L +G+ +HG  LR   + E +
Sbjct: 318 WSKALELFHELLTLDMIEPDSVTLLCIIPACAQ-SRN--LHVGKMIHGYVLRHPLLCE-D 373

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ---NDKFLEAVMFLRQ 273
           T + NAL++ YAK   ++ A   F     RDL+SWN+++ +L +   N  FLE    LR 
Sbjct: 374 TSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLE---LLRW 430

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN----SFVGSALVDMY 329
           M   G  PD V+I SV+  C ++   D  KE H+Y++R+ +L         +G+A++D Y
Sbjct: 431 MLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAY 490

Query: 330 CNCREVECGRRVFDFISDKK--------------------------------IALWNAMI 357
             C  +E   +VF  +S+ +                                +++WN M+
Sbjct: 491 AKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMV 550

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
             Y +N+   +AL LF ++ +  G+ P+A T+ S++PAC    +    +  HG+AI+   
Sbjct: 551 RLYAENDCSSQALGLFHEL-QAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCF 609

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
           G D ++  AL D+Y++ G I  +  +F  +  +D + +  MI GY + G   +AL     
Sbjct: 610 G-DLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFH 668

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M                   L  KP+ + + TVL  C     + +G  I  Y+I  +   
Sbjct: 669 MIE-----------------LGIKPDHVIITTVLSACSHAGLVDEGLNIF-YSIEKVHGM 710

Query: 538 DVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLE 591
            + +   S +VD+ A+ G ++ A  +   MP+  N   W  ++ A   H E   G+ V +
Sbjct: 711 KLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVAD 770

Query: 592 LLKNMVAE 599
            L  + AE
Sbjct: 771 RLFKIEAE 778



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 208/451 (46%), Gaps = 52/451 (11%)

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           L +WNT++S  + +                  + D  ++AS+L +C+ L  +  G+ +H 
Sbjct: 6   LKAWNTMISDCNGD-----------------FRQDYQAVASILKSCAGLSAIKWGRALHG 48

Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI---SDKKIALWNAMITGY-GQN 363
             +R    +    V  AL++MY  C  ++  +++F  I   +D+    WN +++GY G  
Sbjct: 49  SIVRIG-HVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSR 107

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            YD E L LF +M       P++ T + V+P C R         ++ +AIK GL      
Sbjct: 108 VYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLA 167

Query: 424 QNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            NAL+ MY++ G + + +   FD ++ +D VSWN +I+G+       DA  L   M   +
Sbjct: 168 GNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQ 227

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS---ALAKGKEIHAYAIR-NMLATD 538
                             KPN  TL  +LP C +     A   GKEIH Y +R N L  D
Sbjct: 228 -----------------IKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLAD 270

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           V V +ALV  Y + G +  A  +F  M +R++++WN II  Y  +GE  + LEL   ++ 
Sbjct: 271 VFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLT 330

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEG-MDLFYKMKDDYGIEPSPDHYACVVDLLG 657
                  ++P+ VT + +  AC+ S  +  G M   Y ++     E +    A +V    
Sbjct: 331 LDM----IEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNA-LVSFYA 385

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           +   +E AY+   M+        +W+S+L A
Sbjct: 386 KCDDIEGAYETFFMISRR--DLISWNSMLDA 414


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 273/839 (32%), Positives = 426/839 (50%), Gaps = 115/839 (13%)

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF 137
           +   A+   ++ I+ L   +Q H H+V       +  V+  L+N         + V  +F
Sbjct: 2   YELVALASKISNIRQL---RQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAY-VDSIF 57

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS-VALACSNLSRR 196
                 D   ++ M+    R G  +  +  F+     N+ P  F  +  + LA  +    
Sbjct: 58  TSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKS---- 113

Query: 197 DGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
                G   H   L++G  +  FI NA++ MYAK G+VD A+ LF+   +R L  WN+++
Sbjct: 114 -----GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S   ++    EAV+    M  R                                      
Sbjct: 169 SGCWKSGNETEAVVLFNMMPAR-------------------------------------- 190

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N    +++V  Y    ++E  RR FD + ++ +  WNAM + Y Q E  +EAL LF +
Sbjct: 191 --NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248

Query: 376 MEEVAGLWPNATTMSSVVPAC--------------------VRSEAFPDKEGIHGHAI-- 413
           M E  G+ P+ TT    + +C                    +   +F     +  HA   
Sbjct: 249 MLE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307

Query: 414 ----------KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
                     +LG  R+    N ++  Y+R+G++ +++ +FD+M  RD VSWN+MI GY 
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G+   ++ L +EM                 + +  +P+ +T+ +VL  CG + AL   
Sbjct: 368 QNGESAMSIELFKEMI----------------SCMDIQPDEVTIASVLSACGHIGALKLS 411

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
             +        +   +   ++L+ MY+KCG +  A R+F  M  R+V+++N +I  +  +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G G+E ++L+  M  EG     ++P+ VT+I +  ACSH+G+++EG ++F  ++      
Sbjct: 472 GHGKEAIKLVLTMEEEG-----IEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----A 521

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P+ DHYAC+VDLLGRAG++++A  LI  MP +   AG + SLL A RIH+ V +GE+AA 
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKMLIQSMPMK-PHAGVYGSLLNASRIHKRVGLGELAAS 580

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            LF LEP    +YVLLSNIY+S   W+    VR+ MK+ G++K  G SW+E+  ++HKF 
Sbjct: 581 KLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFT 640

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
            GD SH+QS+ ++  L  L  +M++ G+V D SC L +V EEEKE +L  HSEKLAI F 
Sbjct: 641 VGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFA 700

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +L +  GTTIRV KNLR+C DCH A K ISK+E REI++RD  RFH F  G CSC DYW
Sbjct: 701 LLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 43/302 (14%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW     + A+    +EA+  + +M    I PD+  +   + + + I D +L   I
Sbjct: 221 RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI 280

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCG-----------------SDMWDVY-------- 134
              + +    L+S  V   L++M+ K G                 +  W++         
Sbjct: 281 LRMIDQKHIVLNSF-VKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVG 339

Query: 135 ------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVA 187
                 ++FD + ++D VSWNSMIA   + G+  +++E F+ M+   +++P   T+ SV 
Sbjct: 340 KLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVL 399

Query: 188 LACSNLSRRDGLRLGRQV----HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            AC ++     L+L   V       ++++G       N+L+ MY+K G V DA  +F++ 
Sbjct: 400 SACGHIG---ALKLSYWVLDIVREKNIKLGISG---FNSLIFMYSKCGSVADAHRIFQTM 453

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             RD+VS+NT++S  + N    EA+  +  M   GI+PD V+   VL ACSH  +L+ GK
Sbjct: 454 GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK 513

Query: 304 EI 305
            +
Sbjct: 514 NV 515


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/764 (33%), Positives = 417/764 (54%), Gaps = 31/764 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L     +   R++I  ++ M    I  D   F  +LKA +GI+D  LG Q+H   
Sbjct: 105 SWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLA 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  + V   + LV+MY KC   + D ++VF  + E++ V W+++IA   +  ++  
Sbjct: 165 IQMGFE-NDVVTGSALVDMYSKC-KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIE 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L+ F+ ML   +  S  T  SV  +C+ LS     +LG Q+HG++L+    +++ I  A
Sbjct: 223 GLKLFKDMLKVGMGVSQSTYASVFRSCAGLS---AFKLGTQLHGHALKSDFAYDSIIGTA 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK  R+ DA  +F +  +    S+N I+   ++ D+ L+A+   + +    +  D
Sbjct: 280 TLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFD 339

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++  L ACS ++    G ++H  A++  +   N  V + ++DMY  C  +     +F
Sbjct: 340 EISLSGALTACSVIKRHLEGIQLHGLAVKCGLGF-NICVANTILDMYGKCGALMEACLIF 398

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  +    WNA+I  + QNE   + L LF+ M   + + P+  T  SVV AC   +A 
Sbjct: 399 EEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQAL 457

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IHG  IK G+G D +V +AL+DMY + G +  ++ I   +E + TVSWN++I+G+
Sbjct: 458 NYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGF 517

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           +   Q  +A     +M  M                    P++ T  TVL  C  ++ +  
Sbjct: 518 SSQKQSENAQRYFSQMLEM-----------------GIIPDNYTYATVLDVCANMATIEL 560

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  ++  L +DV + S LVDMY+KCG +  +R +F+  P R+ +TW+ +I AY  
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G++ + L + M     +   VKPN   FI++  AC+H G V +G+  F KM   YG+
Sbjct: 621 HGLGEKAINLFEEM-----QLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGL 675

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HY+C+VDLLGR+G+V +A +LI  MP E D    W +LL  C++  NVE+ E A 
Sbjct: 676 DPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDV-IWRTLLSNCKMQGNVEVAEKAF 734

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            +L  L+P  +S YVLL+N+Y+   +W +   +R  MK   ++KEPGCSWIE  DE+H F
Sbjct: 735 NSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTF 794

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           L GD +H +SE+++     L + M+  GYVPD   +L    EE+
Sbjct: 795 LVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDEEMEEQ 838



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 187/702 (26%), Positives = 333/702 (47%), Gaps = 79/702 (11%)

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF 137
             F  +L+  + ++ L+ GKQ+H  ++  G+ + ++ VAN L+  Y K  S M   +KVF
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGF-VPTIYVANCLLQFYCK-SSKMNYAFKVF 64

Query: 138 DRIT-------------------------------EKDQVSWNSMIATLCRFGKWDLALE 166
           DR+                                E+D VSWNS+++     G    ++E
Sbjct: 65  DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMA 225
            F  M    +     T   +  ACS +   +   LG QVH  ++++G  N  +  +AL+ 
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACSGI---EDYGLGLQVHCLAIQMGFENDVVTGSALVD 181

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY+K  ++DDA  +F+   +R+LV W+ +++   QND+F+E +   + M   G+     +
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
            ASV  +C+ L     G ++H +AL++D   D S +G+A +DMY  C  +    +VF+ +
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYD-SIIGTATLDMYAKCERMFDAWKVFNTL 300

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            +     +NA+I GY + +   +AL +F  ++    L  +  ++S  + AC   +   + 
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALDIFQSLQR-NNLGFDEISLSGALTACSVIKRHLEG 359

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +HG A+K GLG +  V N ++DMY + G +  +  IF++ME RD VSWN +I  +   
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHE-- 417

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
                        QN E  K  +    +  + +  +P+  T  +V+  C    AL  G E
Sbjct: 418 -------------QNEEIVKTLSLFVSMLRSTM--EPDDFTYGSVVKACAGQQALNYGTE 462

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   I++ +  D  VGSALVDMY KCG L  A ++   +  +  ++WN II  +    +
Sbjct: 463 IHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQ 522

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +        M+  G     + P+  T+  +   C++   +  G  +  ++     ++  
Sbjct: 523 SENAQRYFSQMLEMG-----IIPDNYTYATVLDVCANMATIELGKQIHAQI---LKLQLH 574

Query: 646 PDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
            D Y  + +VD+  + G ++D+ +L+    P+ D    WS+++ A   H    +GE  A 
Sbjct: 575 SDVYIASTLVDMYSKCGNMQDS-RLMFEKAPKRDYV-TWSAMICAYAYHG---LGE-KAI 628

Query: 704 NLF----LLEPDVASHYVLLSNIYSSAQLW--DKAMDVRKKM 739
           NLF    LL     +H + +S + + A +   DK +   +KM
Sbjct: 629 NLFEEMQLLNVK-PNHTIFISVLRACAHMGYVDKGLHYFQKM 669



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 249/505 (49%), Gaps = 42/505 (8%)

Query: 31  SLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI 90
           +LP P  Q     S+   +   AR +Q  +A+  +  + R+++  D  +    L A + I
Sbjct: 299 TLPNPPRQ-----SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVI 353

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           +    G Q+H   VK G G  ++ VANT+++MYGKCG+ M +   +F+ +  +D VSWN+
Sbjct: 354 KRHLEGIQLHGLAVKCGLGF-NICVANTILDMYGKCGALM-EACLIFEEMERRDAVSWNA 411

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +IA   +  +    L  F  ML S +EP  FT  SV  AC+    +  L  G ++HG  +
Sbjct: 412 IIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAG---QQALNYGTEIHGRII 468

Query: 211 RVG---EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           + G   +W  F+ +AL+ MY K G + +A+ +    E++  VSWN+I+S  S   +   A
Sbjct: 469 KSGMGLDW--FVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
             +  QM   GI PD  + A+VL  C+++  ++ GK+IHA  L+  +  D  ++ S LVD
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSD-VYIASTLVD 585

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++  R +F+    +    W+AMI  Y  +   E+A+ LF +M ++  + PN T
Sbjct: 586 MYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEM-QLLNVKPNHT 644

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKL---GLGRDRYVQNALMDMYSRMGRIEISKTIF 444
              SV+ AC     + DK G+H     L   GL       + ++D+  R G++  +  + 
Sbjct: 645 IFISVLRACAHM-GYVDK-GLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLI 702

Query: 445 DDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           + M    D V W T+++    C   G+  +          EK  N++  LD     P+ +
Sbjct: 703 ESMPFEADDVIWRTLLSN---CKMQGNVEV---------AEKAFNSLLQLD-----PQDS 745

Query: 504 S--ITLMTVLPGCGALSALAKGKEI 526
           S  + L  V    G    +AK + I
Sbjct: 746 SAYVLLANVYAIVGMWGEVAKMRSI 770


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 389/680 (57%), Gaps = 40/680 (5%)

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E N F  N ++  YAK  ++  A+ LF      D VS+NT++S  +   + + A++  ++
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G + DG +++ ++ AC   + +D  K++H +A+        S V +A V  Y    
Sbjct: 131 MRELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGG-FDSYSSVNNAFVTYYSKGG 187

Query: 334 EVECGRRVF---DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            +     VF   D + D+    WN+MI  YGQ++   +AL L+ +M    G   +  T++
Sbjct: 188 LLREAVSVFYGMDGLRDE--VSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLA 244

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR---IEISKTIFDDM 447
           SV+ A    +        HG  IK G  ++ +V + L+D YS+ G    +  S+ +F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEI 304

Query: 448 EVRDTVSWNTMITGYTICGQHGD-ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              D V WNTMI+GY++  +H + A+   R+MQ +                   +P+  +
Sbjct: 305 LSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGH-----------------RPDDCS 347

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
            + V   C  LS+ ++GK+IH  AI+ N+ +  + V +AL+ +Y K G L  ARRVFD M
Sbjct: 348 FVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRM 407

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  N +++N +I  Y  HG G E L L + M+  G     + PN +TF+A+ +AC+H G 
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSG-----IAPNNITFVAILSACAHCGK 462

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG   F  MK+ + IEP  +HY+C++DLLGRAGK+E+A + I+ MP +   + AW++L
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK-PGSVAWAAL 521

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACR H+N+ + E AA+ L +++P  A+ YV+L+N+Y+ A  W++   VRK M+   +R
Sbjct: 522 LGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIR 581

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           K+PGCSWIE   + H F+A D SH    +++ +LE + ++M+K GYV D    +   +E 
Sbjct: 582 KKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEA 641

Query: 806 EKETL---LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            +      L  HSEKLA+AFG+++T  G  I V KNLR+C DCH A KF+S +  REII+
Sbjct: 642 GEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIV 701

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFH FK+G CSCGDYW
Sbjct: 702 RDNLRFHCFKDGKCSCGDYW 721



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 251/540 (46%), Gaps = 65/540 (12%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--------------- 127
           +LK+VA  +DL  GK +HA  VK     SS  ++N  VN+Y KCG               
Sbjct: 15  LLKSVAE-RDLFTGKSLHALYVK-SIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEP 72

Query: 128 ---------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
                          S +    ++FD   + D VS+N++I+      +   A+  F+ M 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
               E   FTL  +  AC      D + L +Q+H  ++  G +  + + NA +  Y+K G
Sbjct: 133 ELGFEVDGFTLSGLIAACC-----DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 232 RVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
            + +A ++F   +  RD VSWN+++ +  Q+ +  +A+   ++M  +G K D  ++ASVL
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC--RE-VECGRRVFDFISD 347
            A + L+ L  G++ H   ++      NS VGS L+D Y  C  R+ +    +VF  I  
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306

Query: 348 KKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
             + LWN MI+GY  N E+ EEA+  F +M+ + G  P+  +   V  AC    +    +
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQGK 365

Query: 407 GIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
            IHG AIK  +  +R  V NAL+ +Y + G +  ++ +FD M   + VS+N MI GY   
Sbjct: 366 QIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYA-- 423

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            QHG     LR  Q M           LD  +    PN+IT + +L  C     + +G++
Sbjct: 424 -QHGHGTEALRLYQRM-----------LDSGI---APNNITFVAILSACAHCGKVDEGQK 468

Query: 526 IHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                     +  +    S ++D+  + G L  A R  D MP +   + W  ++ A   H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 206/430 (47%), Gaps = 21/430 (4%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A++ +  M     + D F    ++ A     DL   KQ+H   V  G+  S  +V N  V
Sbjct: 124 AMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFD-SYSSVNNAFV 180

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
             Y K G     V   +     +D+VSWNSMI    +  +   AL  ++ M++   +   
Sbjct: 181 TYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD---DA 236
           FTL SV  A ++L   D L  GRQ HG  ++ G   N+ + + L+  Y+K G  D   D+
Sbjct: 241 FTLASVLNALTSL---DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDS 297

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           + +F+     DLV WNT++S  S N++   EAV   RQM   G +PD  S   V  ACS+
Sbjct: 298 EKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L     GK+IH  A++++I  +   V +AL+ +Y     +   RRVFD + +     +N 
Sbjct: 358 LSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNC 417

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG---HA 412
           MI GY Q+ +  EAL L+ +M + +G+ PN  T  +++ AC       + +         
Sbjct: 418 MIKGYAQHGHGTEALRLYQRMLD-SGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKET 476

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDA 471
            K+    + Y  + ++D+  R G++E ++   D M  +  +V+W  ++     C +H + 
Sbjct: 477 FKIEPEAEHY--SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA---CRKHKNM 531

Query: 472 LMLLREMQNM 481
            +  R  + +
Sbjct: 532 ALAERAAKEL 541



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 46/239 (19%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+ S+ +M R   +PD+ +F  V  A + +   S GKQIH   +K     + ++V N L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNAL 387

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +++Y K G ++ D  +VFDR+ E + VS+N MI    + G    AL  ++ ML S + P+
Sbjct: 388 ISLYYKSG-NLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPN 446

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
           + T V++  AC                                     A  G+VD+ +  
Sbjct: 447 NITFVAILSAC-------------------------------------AHCGKVDEGQKY 469

Query: 240 FKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           F + ++   +      ++ ++  L +  K  EA  F+  M     KP  V+ A++L AC
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVAWAALLGAC 525



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 51/227 (22%)

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMG------------------------------ 435
           + +H   +K  +    Y+ N  +++YS+ G                              
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKD 87

Query: 436 -RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            +I I++ +FD+    DTVS+NT+I+GY    +   A++L + M+ +  E          
Sbjct: 88  SKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE---------- 137

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                   +  TL  ++  C     L   K++H +A+     +   V +A V  Y+K G 
Sbjct: 138 -------VDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188

Query: 555 LNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           L  A  VF  M  +R+ ++WN +I+AYG H EG + L L K M+ +G
Sbjct: 189 LREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 9/119 (7%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GK +HA  +++++A+   + +  V++Y+KCGCL++AR  FD     NV ++NVI+ A
Sbjct: 24  LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           Y    +    + + + +  E       +P+ V++  L +  + +      M LF +M++
Sbjct: 84  YAKDSK----IHIARQLFDENP-----QPDTVSYNTLISGYADARETVAAMVLFKRMRE 133


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 365/643 (56%), Gaps = 37/643 (5%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           N+ + SLS++ K  EA+  +     +     PD  + A  L +C   + L+ G+ ++   
Sbjct: 35  NSTLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 94

Query: 310 LR-----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS---DKKIALWNAMITGYG 361
           L      N  L++N  +   L+ ++  CR V+  RRVF+      D   ++W AM  GY 
Sbjct: 95  LLYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYS 154

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +N Y +EAL+L+ +M    G   N    S  + AC           +H   +K     D+
Sbjct: 155 RNGYPKEALLLYYEMVCQFGQLGN-FAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQ 213

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V NAL+ +YS  G  + +  +FD M  R+ VSWN++I G        +A+   R MQ  
Sbjct: 214 VVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQG- 272

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
              K     +             +TL T+LP C  ++AL  GKEIHA  +++    D  V
Sbjct: 273 ---KGMGFSW-------------VTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPV 316

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++LVDMYAKCG +++ RRVF+ M  +++ +WN +I  Y ++G   E +E  + M+  G 
Sbjct: 317 LNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSG- 375

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                 P+ +TFIAL + CSH+G+  +G  LF  MK DYGI P+ +HYAC+VD+LGRAG+
Sbjct: 376 ----FSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGR 431

Query: 662 VEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           +++A +++  MP  F   G+ W SLL +CR+H NV + E  A+ LF LEP+ A +YV+LS
Sbjct: 432 IKEALEIVKNMP--FKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 489

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH-QQSEQLHGFL 779
           NIY++A +W+    VR+ M++ G+ KE GCSW++   +IH F+AG  +  + S +     
Sbjct: 490 NIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 549

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           + L E M + GYVPDT  VLH+V+EE +   +CGHSE+LA  F ++NT  G  IR+ KNL
Sbjct: 550 KRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNL 609

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           RVC DCH   K +SK+  R I+LRD  RFHHFK+G CSC DYW
Sbjct: 610 RVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W+      +R+   +EA+L Y EM     Q  NFAF   LKA + + DL  G+ +HA V+
Sbjct: 146 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVL 205

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K       V V N L+ +Y + G    +  +VFD +  ++ VSWNS+IA L +      A
Sbjct: 206 KATEDPDQV-VNNALLRLYSEDGC-FDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEA 263

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNAL 223
           +EAFR+M    +  S  TL ++   C+   R   L  G+++H   ++   + +  ++N+L
Sbjct: 264 IEAFRIMQGKGMGFSWVTLTTILPVCA---RVTALGSGKEIHAVIVKSTAKPDAPVLNSL 320

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +D  + +F   + +DL SWNT+++  + N +  EA+   ++M   G  PDG
Sbjct: 321 VDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDG 380

Query: 284 VSIASVLPACSHLEMLDTG 302
           ++  ++L  CSH  + D G
Sbjct: 381 ITFIALLSGCSHAGLADDG 399



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 223/472 (47%), Gaps = 29/472 (6%)

Query: 15  PLSSLQTHQPPAT--TATSLPLPGSQTRCKESWIESLRSEARSNQFREAI--LSYIEMTR 70
           P  SL T+   +T  TATS P    + R   S   +L+S ++S +  EA+  + Y     
Sbjct: 5   PAISLSTNITVSTNITATSAPTTLHKHRLHNS---TLKSLSKSGKLDEALRLIEYWPSKS 61

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG-----LSSVTVANTLVNMYGK 125
               PD  A    L +    + L  G++++  ++ Y        L++ T+   L+ ++  
Sbjct: 62  PATAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSV 121

Query: 126 CGSDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           C   + +  +VF+   E     +  W +M     R G    AL  +  M+    +  +F 
Sbjct: 122 C-RRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFA 180

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFK 241
                 ACS+L     L+ GR VH   L+  E  +  + NAL+ +Y++ G  D+A  +F 
Sbjct: 181 FSMALKACSDLG---DLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFD 237

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
               R++VSWN++++ L + D   EA+   R M  +G+    V++ ++LP C+ +  L +
Sbjct: 238 GMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGS 297

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GKEIHA  +++    D   + S LVDMY  C  ++  RRVF+ +  K +  WN +ITGY 
Sbjct: 298 GKEIHAVIVKSTAKPDAPVLNS-LVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYA 356

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
            N    EA+  F +M   +G  P+  T  +++  C  +    D   +    +K+  G   
Sbjct: 357 INGRMTEAMESFQEM-ICSGFSPDGITFIALLSGCSHAGLADDGCRLF-EMMKMDYGISP 414

Query: 422 YVQN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
            V++   L+D+  R GRI+ +  I  +M  + T S W +++     C  HG+
Sbjct: 415 TVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNS---CRLHGN 463


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/734 (32%), Positives = 407/734 (55%), Gaps = 33/734 (4%)

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVAL--ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
           +L+L  F   + SN    SF    ++L   C+ +   +      Q+H  +++ G  +  +
Sbjct: 15  NLSLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN------QIHSQTIKTGLSSNHL 68

Query: 220 MNALMAMYA---KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
               + ++    + G V  A+ +F       +  WNT++   S+ +     V   + M +
Sbjct: 69  FLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLV 128

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
             IKPDG +   +L   +    L  GK +  +A+ +  L  N FV    + ++  C  V 
Sbjct: 129 HNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVN 188

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE-VAGLWPNATTMSSVVPA 395
             R++FD     ++  WN +++GY + +  EE+  LFI+ME+    + PN+ T+  ++ A
Sbjct: 189 YARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSA 248

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYV-QNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           C + +     + I+   IK G+     + +NAL+DM++  G ++ ++ +FD+M+ RD +S
Sbjct: 249 CSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVIS 308

Query: 455 WNTMITGYTICGQHGDALMLLREMQN--------MEEEKNRNNVYDLDETVLRP------ 500
           W +++TG+    +   A     +M          M +   R N +    T+ R       
Sbjct: 309 WTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV 368

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           KP+  T++++L  C  L AL  G+    Y  +N +  D  +G+AL+DMY KCG +  A++
Sbjct: 369 KPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKK 428

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +F+ M  ++  TW  +I+    +G G+E L +   M+        V P+E+T+I +  AC
Sbjct: 429 IFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE-----ASVTPDEITYIGVMCAC 483

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           +H G+V++G   F  M   +GI+P+  HY C+VDLLGRAG +++A ++I  MP +   + 
Sbjct: 484 THVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK-PNSI 542

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
            W SLLGACR+H+NV++ E+AA  +  LEP+  + YVLL NIY++ + W    +VRK M 
Sbjct: 543 VWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMM 602

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           E G++K PGCS +E    +++F+AGD SH QS++++  LEN+ + +   GY PDTS V  
Sbjct: 603 ERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFL 662

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +V EE+KET L  HSEKLAIA+ ++++  G TIR+ KNLR+C DCH     +SK+ +RE+
Sbjct: 663 DVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNREL 722

Query: 861 ILRDVRRFHHFKNG 874
           I+RD  RFHHF++G
Sbjct: 723 IVRDKTRFHHFRHG 736



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 250/539 (46%), Gaps = 65/539 (12%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           QIH+  +K G   + + +   ++    K   D++   KVFD I +     WN+MI    R
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EW 215
               +  +  +++ML  N++P  FT           ++   L+ G+ +  +++  G  + 
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTF---PFLLKGFTKDMALKYGKVLLNHAVIHGFLDS 169

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F+    + +++  G V+ A+ +F   +  ++V+WN ++S  ++  ++ E+     +M 
Sbjct: 170 NLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEME 229

Query: 276 LRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
            +   + P+ V++  +L ACS L+ L  GK I+   ++  I+  N  + +AL+DM+ +C 
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG 289

Query: 334 EVECGRRVFD----------------FISDKKIAL---------------WNAMITGYGQ 362
           E++  R VFD                F +  +I L               W AMI GY +
Sbjct: 290 EMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLR 349

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
               +E L LF  M +++ + P+  TM S++ AC    A    E    +  K  +  D +
Sbjct: 350 MNRFKEVLTLFRDM-QMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTF 408

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           + NAL+DMY + G +E +K IF++M+ +D  +W  MI G    G   +AL +        
Sbjct: 409 IGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFS------ 462

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA-YAIRNMLATDVVV 541
                   Y L+ +V    P+ IT + V+  C  +  +AKGK   +  A+++ +  ++  
Sbjct: 463 --------YMLEASV---TPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTH 511

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ-------EVLEL 592
              +VD+  + G L  A  V   MPV+ N I W  ++ A  +H   Q       E+LEL
Sbjct: 512 YGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILEL 570



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 222/477 (46%), Gaps = 43/477 (9%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   ++  +R N     +  Y  M   +I+PD F FP +LK       L  GK +  H V
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
            +G+  S++ V    ++++  CG   +   K+FD     + V+WN +++   RF +++ +
Sbjct: 163 IHGFLDSNLFVQKGFIHLFSLCGLVNY-ARKIFDMGDGWEVVTWNVVLSGYNRFKRYEES 221

Query: 165 LEAFRMMLYS--NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIM 220
              F  M      V P+S TLV +  ACS L    G   G+ ++   ++ G  E N  + 
Sbjct: 222 KRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVG---GKCIYNKYIKEGIVEPNLILE 278

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN------------------- 261
           NAL+ M+A  G +D A+ +F   + RD++SW +IV+  +                     
Sbjct: 279 NALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYV 338

Query: 262 ------------DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
                       ++F E +   R M +  +KPD  ++ S+L AC+HL  L+ G+    Y 
Sbjct: 339 SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI 398

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
            +N I  +++F+G+AL+DMY  C  VE  +++F+ +  K    W AMI G   N + EEA
Sbjct: 399 DKNKIK-NDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEA 457

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALM 428
           L +F  M E A + P+  T   V+ AC         K      A++ G+  +      ++
Sbjct: 458 LTMFSYMLE-ASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMV 516

Query: 429 DMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           D+  R G ++ +  +  +M V+ +++ W +++    +      A M   E+  +E E
Sbjct: 517 DLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPE 573



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R N+F+E +  + +M  S+++PD F   ++L A A +  L LG+    ++
Sbjct: 339 SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI 398

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K     +   + N L++MY KCG ++    K+F+ + +KD+ +W +MI  L   G  + 
Sbjct: 399 DKNKIK-NDTFIGNALIDMYFKCG-NVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEE 456

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           AL  F  ML ++V P   T + V  AC+++
Sbjct: 457 ALTMFSYMLEASVTPDEITYIGVMCACTHV 486


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/686 (34%), Positives = 380/686 (55%), Gaps = 22/686 (3%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            R +HG+ ++ G   + F+  +L+  Y + G   DA++LF    ++++V+W  +++  + 
Sbjct: 97  ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N + LEA+    +M   G  P   ++ ++L ACS     D G ++H Y ++   L   S 
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITS- 215

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEV 379
           +G++L  MY     +E   R F  + DK +  W  MI+   ++E Y E  L LF+ M  +
Sbjct: 216 IGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDML-M 274

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ PN  T++SV+  C         + +     K+G   +  V+N+ M +Y R G  + 
Sbjct: 275 DGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDE 334

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHG--DALMLLREMQNMEEEKNRNNVYDLDETV 497
           +   F++M+    ++WN MI+GY    +    D     R  Q ++  +N      L  + 
Sbjct: 335 AMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN------LKRSA 388

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           +  KP+  T  ++L  C ++ AL +G++IHA  I+    +DVVV SALV+MY KCGC+  
Sbjct: 389 M--KPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIED 446

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A + F  M +R ++TW  +I  Y  HG  QE ++L ++M     R   V+PNE+TF+ + 
Sbjct: 447 ATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDM-----RFAGVRPNEITFVCVL 501

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACS++G+  +    F  MK++Y IEP  DHY C+VD+  R G+++DA+  I     E +
Sbjct: 502 SACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPN 561

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
           +A  WSSL+  CR H N+E+   AA  L  L P     YVLL N+Y S + W     VRK
Sbjct: 562 EA-IWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRK 620

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK+ G+      SWI   D+++ F A D +H+ S++L+  LENL E+ +  GY P  S 
Sbjct: 621 LMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSA 680

Query: 798 VLHNVNEEEKETL--LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
            L +  +++K     +  HSE+LA+A G+L TPPG T+RV KN+ +C DCH + KF S +
Sbjct: 681 ELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLL 740

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDY 881
            +REI++RD +R H FK+G CSCGD+
Sbjct: 741 ANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 257/520 (49%), Gaps = 57/520 (10%)

Query: 90  IQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS 147
           ++  SLG  + +H H+VK G   + + VA +LVN Y +CG+   D   +FD++ EK+ V+
Sbjct: 89  VETGSLGGARALHGHMVKTGTS-ADMFVATSLVNAYMRCGASQ-DARSLFDQMPEKNVVT 146

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           W ++I       +   ALE F  ML +   PS +TL ++  ACS  +  D   LG QVHG
Sbjct: 147 WTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNAD---LGSQVHG 203

Query: 208 NSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            +++    + T I N+L  MYAK G ++ A   F+   D+++++W T++S+ ++++ + E
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 267 -AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFV 321
             +     M + G+ P+  ++ SV+  C     L+ GK++ A+  +     +I + NS  
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNS-- 321

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ---NEYDE--------EAL 370
               + +Y    E +   R F+ + D  I  WNAMI+GY Q      D+        +AL
Sbjct: 322 ---TMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQAL 378

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            +F  ++  A + P+  T SS++  C    A    E IH   IK G   D  V +AL++M
Sbjct: 379 KVFRNLKRSA-MKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNM 437

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++ G IE +   F +M +R  V+W +MI+GY+  G+  +A+ L  +M+           
Sbjct: 438 YNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMR----------- 486

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDM 548
                     +PN IT + VL  C + + LA+  E +   ++     + +V     +VDM
Sbjct: 487 ------FAGVRPNEITFVCVLSAC-SYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDM 539

Query: 549 YAKCGCLN----FARRVFDLMPVRNVITWNVIIMAYGMHG 584
           + + G L+    F RR     P  N   W+ ++     HG
Sbjct: 540 FVRLGRLDDAFAFIRRT-GFEP--NEAIWSSLVAGCRSHG 576



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 221/451 (49%), Gaps = 43/451 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +     ++Q  EA+  ++EM  +   P ++   A+L A +   +  LG Q+H + 
Sbjct: 146 TWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYT 205

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-D 162
           +KY   LS  ++ N+L  MY K GS +    + F  + +K+ ++W +MI+       + +
Sbjct: 206 IKY-RALSITSIGNSLCRMYAKSGS-LESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           L L  F  ML   V P+ FTL SV   C     R  L LG+QV     ++G + N  + N
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGT---RLDLNLGKQVQAFCFKIGCQTNIPVKN 320

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ-----------NDKFLEAVMF 270
           + M +Y + G  D+A   F+  +D  +++WN ++S  +Q             +  +A+  
Sbjct: 321 STMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R +    +KPD  + +S+L  CS +  L+ G++IHA  ++   L D   V SALV+MY 
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSD-VVVNSALVNMYN 439

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +E   + F  +S + +  W +MI+GY Q+   +EA+ LF  M   AG+ PN  T  
Sbjct: 440 KCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDM-RFAGVRPNEITFV 498

Query: 391 SVVPACV------RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE-----I 439
            V+ AC       ++E + D   +     K+    D Y    ++DM+ R+GR++     I
Sbjct: 499 CVLSACSYAGLAEKAEHYFD---MMKEEYKIEPIVDHY--GCMVDMFVRLGRLDDAFAFI 553

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            +T F+  E      W++++ G   C  HG+
Sbjct: 554 RRTGFEPNE----AIWSSLVAG---CRSHGN 577



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 28/274 (10%)

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV--VP---ACVRSEAFPDKEG 407
           WN       QN    EA +  + + E   +     T+ S   VP    CV + +      
Sbjct: 40  WNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARA 99

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +HGH +K G   D +V  +L++ Y R G  + ++++FD M  ++ V+W  +ITGYT+  Q
Sbjct: 100 LHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQ 159

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL +  EM     E  R              P+  TL  +L  C A +    G ++H
Sbjct: 160 LLEALEVFVEML----EAGR-------------YPSHYTLGAMLNACSASNNADLGSQVH 202

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            Y I+    +   +G++L  MYAK G L  A R F ++P +NVITW  +I A        
Sbjct: 203 GYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYT 262

Query: 588 EV-LELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           E+ L L  +M+ +G     V PNE T  ++ + C
Sbjct: 263 ELGLTLFLDMLMDG-----VLPNEFTLTSVMSLC 291


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/705 (33%), Positives = 388/705 (55%), Gaps = 96/705 (13%)

Query: 204 QVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           Q H   L+ G  N  +I   L+A Y+     +DA  + +S  D  + S+++++ +L++  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
            F +++    +M   G+ PD   + ++   C+ L     GK+IH  +  + + +D +FV 
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD-AFVQ 154

Query: 323 SALVDMYCNCREVECGRRVFDFISDK---------------------------------- 348
            ++  MY  C  +   R+VFD +SDK                                  
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 349 -KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
             I  WN +++G+ ++ Y +EA+++F K+  + G  P+  T+SSV+P+   SE       
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRL 273

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD---------------- 451
           IHG+ IK GL +D+ V +A++DMY + G +    ++F+  E+ +                
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333

Query: 452 -------------------TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
                               VSW ++I G    G+  +AL L REMQ             
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ------------- 380

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
               V   KPN +T+ ++LP CG ++AL  G+  H +A+R  L  +V VGSAL+DMYAKC
Sbjct: 381 ----VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
           G +N ++ VF++MP +N++ WN ++  + MHG+ +EV+ + ++++        +KP+ ++
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-----RLKPDFIS 491

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           F +L +AC   G+  EG   F  M ++YGI+P  +HY+C+V+LLGRAGK+++AY LI  M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
           P E D    W +LL +CR+  NV++ EIAA+ LF LEP+    YVLLSNIY++  +W + 
Sbjct: 552 PFEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
             +R KM+ +G++K PGCSWI+  + ++  LAGD SH Q +Q+   ++ +S+ MRK G+ 
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
           P+    LH+V E+E+E +L GHSEKLA+ FG+LNTP GT ++V +
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVER 715



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 248/547 (45%), Gaps = 108/547 (19%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGK--CGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           Q HA ++K G   +   ++  L+  Y    C +D  D+  V   I +    S++S+I  L
Sbjct: 36  QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDA-DL--VLQSIPDPTIYSFSSLIYAL 91

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +   +  ++  F  M    + P S  L ++   C+ LS     ++G+Q+H  S   G +
Sbjct: 92  TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS---AFKVGKQIHCVSCVSGLD 148

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD--------------------------- 247
            + F+  ++  MY + GR+ DA+ +F    D+D                           
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208

Query: 248 --------LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
                   +VSWN I+S  +++    EAV+  +++   G  PD V+++SVLP+    EML
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMY-----------------------CNCREVE 336
           + G+ IH Y ++  +L D   + SA++DMY                       CN     
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327

Query: 337 CGR--------RVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
             R         +F+   ++ + L    W ++I G  QN  D EAL LF +M+ VAG+ P
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ-VAGVKP 386

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  T+ S++PAC    A       HG A+++ L  + +V +AL+DMY++ GRI +S+ +F
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           + M  ++ V WN+++ G+++   HG A    +E+ ++ E   R           R KP+ 
Sbjct: 447 NMMPTKNLVCWNSLMNGFSM---HGKA----KEVMSIFESLMRT----------RLKPDF 489

Query: 505 ITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
           I+  ++L  CG +    +G +        Y I+  L       S +V++  + G L  A 
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCMVNLLGRAGKLQEAY 545

Query: 560 RVFDLMP 566
            +   MP
Sbjct: 546 DLIKEMP 552



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 78/415 (18%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
            ++  F ++I  +  M    + PD+   P + K  A +    +GKQIH      G  + +
Sbjct: 92  TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--------------------------- 145
             V  ++ +MY +CG  M D  KVFDR+++KD                            
Sbjct: 152 F-VQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209

Query: 146 --------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
                   VSWN +++   R G    A+  F+ + +    P   T+ SV     ++   +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV---LPSVGDSE 266

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFE------------ 244
            L +GR +HG  ++ G   +  +++A++ MY K G V    +LF  FE            
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326

Query: 245 -----------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
                                  + ++VSW +I++  +QN K +EA+   R+M + G+KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+I S+LPAC ++  L  G+  H +A+R   L+DN  VGSAL+DMY  C  +   + V
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIV 445

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
           F+ +  K +  WN+++ G+  +   +E + +F  +     L P+  + +S++ AC
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSAC 499



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 43/296 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    RS   +EA++ + ++      PD     +VL +V   + L++G+ IH +V
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS----------------------------------- 128
           +K G  L    V + +++MYGK G                                    
Sbjct: 279 IKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337

Query: 129 -DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            +M++++K  ++  E + VSW S+IA   + GK   ALE FR M  + V+P+  T+ S+ 
Sbjct: 338 LEMFELFK--EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC N++    L  GR  HG ++RV    N  + +AL+ MYAK GR++ ++ +F     +
Sbjct: 396 PACGNIA---ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           +LV WN++++  S + K  E +     +    +KPD +S  S+L AC  + + D G
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++ +  EA+  + EM  + ++P++   P++L A   I  L  G+  H   
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+  + L +V V + L++MY KCG  ++  +  VF+ +  K+ V WNS++      GK  
Sbjct: 415 VRV-HLLDNVHVGSALIDMYAKCGRINLSQI--VFNMMPTKNLVCWNSLMNGFSMHGKAK 471

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG----LRLGRQVHGNSLRVGEWNTF 218
             +  F  ++ + ++P   +  S+  AC  +   D      ++  + +G   R+  +   
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--- 528

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             + ++ +  + G++ +A  L K    + D   W  +++S
Sbjct: 529 --SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/687 (36%), Positives = 377/687 (54%), Gaps = 73/687 (10%)

Query: 203 RQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQ+HG   R   +++  ++   ++  + L  VD A ++F+ FE ++   +N ++  L++N
Sbjct: 59  RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            +F  ++ F   M    I PD ++   VL + + L     G+ +H   L+  +  D SFV
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFD-SFV 177

Query: 322 GSALVDMYCNCREVECGRRVFD----FISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             +LVDMY    E+    +VFD     + +  + +WN +I GY +               
Sbjct: 178 RVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCR--------------- 222

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
                      M  +V A    ++ P K              D    N+L++ + +MG +
Sbjct: 223 -----------MGDLVKATELFDSMPKK--------------DTGSWNSLINGFMKMGDM 257

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             +K +F  M  ++ VSW TM+ G++   Q+GD    L     M EE  R          
Sbjct: 258 GRAKELFVKMPEKNVVSWTTMVNGFS---QNGDPEKALETFFCMLEEGAR---------- 304

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               PN  T+++ L  C  + AL  G  IH Y   N    ++V+G+ALVDMYAKCG +  
Sbjct: 305 ----PNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEH 360

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A +VF     + ++ W+V+I  + +HG  ++ L+  + M   G+     KP+ V F+A+ 
Sbjct: 361 AEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGT-----KPDSVVFLAVL 415

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PE 675
            ACSHSG V+EG+  F  M+  Y IEPS  HY  VVD+LGRAG++++A + I  MP  P+
Sbjct: 416 NACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPD 475

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
           F     W +L  ACR H+NVE+ E+A++ L  LEP     YV LSN Y+S   WD A  V
Sbjct: 476 FV---VWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERV 532

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           R  M++ G  K+PG S+IE   ++H+F+AGD +H ++ +++  L+ +S   R++GY  + 
Sbjct: 533 RVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEI 592

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
            CVLHN+ EEEKE  L  HSEKLA+AFGI++T PGTT+R+ KNLRVC DCH   K+ SK+
Sbjct: 593 ECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKM 652

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             REIILRD++RFHHF +G CSCGDYW
Sbjct: 653 SKREIILRDMKRFHHFNDGVCSCGDYW 679



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 71/344 (20%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A +++F  +I  ++ M +  I PD   FP VLK+ A + +  +G+ +H  ++K+G 
Sbjct: 112 IRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGL 171

Query: 109 GL----------------------------------SSVTVANTLVNMYGKCGSDMWDVY 134
                                                SV + N L++ Y + G D+    
Sbjct: 172 EFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMG-DLVKAT 230

Query: 135 KVFDRITEKDQVSWNSMIATLCRFG------------------KW-------------DL 163
           ++FD + +KD  SWNS+I    + G                   W             + 
Sbjct: 231 ELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEK 290

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNA 222
           ALE F  ML     P+ +T+VS   AC+ +   D GLR+   + GN  ++   N  I  A
Sbjct: 291 ALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL---NLVIGTA 347

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G ++ A+ +F   +++ L+ W+ ++   + +  F +A+ +   M   G KPD
Sbjct: 348 LVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPD 407

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
            V   +VL ACSH   ++ G +     +R   LI+ S     LV
Sbjct: 408 SVVFLAVLNACSHSGQVNEGLKFFD-NMRRGYLIEPSMKHYTLV 450



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 179/452 (39%), Gaps = 91/452 (20%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +QIH  + +     SS  V    ++      S  + +  +F R   K+   +N++I  L 
Sbjct: 59  RQIHGQLYRCNV-FSSSRVVTQFISSCSSLNSVDYAI-SIFQRFELKNSYLFNALIRGLA 116

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
              +++ ++  F +ML   + P   T   V  + + LS      +GR +H   L+ G E+
Sbjct: 117 ENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGG---VGRALHCGILKFGLEF 173

Query: 216 NTFIMNALMAMYAK-----------------------------------LGRVDDAKTLF 240
           ++F+  +L+ MY K                                   +G +  A  LF
Sbjct: 174 DSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELF 233

Query: 241 KSFEDRDLVSWN-------------------------------TIVSSLSQNDKFLEAVM 269
            S   +D  SWN                               T+V+  SQN    +A+ 
Sbjct: 234 DSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALE 293

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
               M   G +P+  +I S L AC+ +  LD G  IH Y   N   + N  +G+ALVDMY
Sbjct: 294 TFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL-NLVIGTALVDMY 352

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  +E   +VF    +K + +W+ MI G+  + +  +AL  F  M +  G  P++   
Sbjct: 353 AKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWM-KFTGTKPDSVVF 411

Query: 390 SSVVPACVRSEAFPDKEGI-------HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            +V+ AC  S +    EG+        G+ I+  +     V    +DM  R GR++ +  
Sbjct: 412 LAVLNAC--SHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLV----VDMLGRAGRLDEALK 465

Query: 443 IFDDMEVR-DTVSWNTMITGYTICGQHGDALM 473
               M +  D V W  +   +  C  H +  M
Sbjct: 466 FIRAMPITPDFVVWGAL---FCACRTHKNVEM 494



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 6/213 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   +++    +A+ ++  M     +P+++   + L A A I  L  G +IH ++
Sbjct: 274 SWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL 333

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G+ L+ V +   LV+MY KCG ++    KVF    EK  + W+ MI      G +  
Sbjct: 334 SGNGFKLNLV-IGTALVDMYAKCG-NIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRK 391

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           AL+ F  M ++  +P S   ++V  ACS+  +  +GL+    +    L       + +  
Sbjct: 392 ALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTL-- 449

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTI 254
           ++ M  + GR+D+A    ++     D V W  +
Sbjct: 450 VVDMLGRAGRLDEALKFIRAMPITPDFVVWGAL 482


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/810 (33%), Positives = 429/810 (52%), Gaps = 57/810 (7%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI----TEKDQV 146
           +DLSLG+  H  + + GY L +  VA +L+ MY  CG ++    + FDR        D V
Sbjct: 178 RDLSLGRFFHDTIRRCGYDLDA-GVAISLIGMYSNCG-EIEAAVQAFDRAFLRAPSSDVV 235

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SW  ++A       +  AL+ F  M    V P     V+V  +   L     +  G+++H
Sbjct: 236 SWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLG---DIAQGKRIH 292

Query: 207 GNSL-RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              L R  E ++ +  A++ MYA++G + DA   F   +   + +W  +V +  +   F 
Sbjct: 293 SMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFN 352

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA--LRNDILIDNSFVGS 323
             +  L +M   G+KP+ V+  ++L  C +L + D GK+I A A   +   L  ++ +G+
Sbjct: 353 SVMQILERMEAEGVKPNEVTFITILDTCKNLALED-GKKIQALASEQQQRSLDASARIGT 411

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAG 381
           A++ M+     +   R  FD IS K +A + AMI GY  N+   EAL +F +M    VA 
Sbjct: 412 AVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAA 471

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
              +   ++  + AC       + + +H  A+ LGL RD  V+ AL+DMYSR G +E + 
Sbjct: 472 ---DNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDAS 528

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F ++E  DTV+W+ MI      G+HGD    +     M+++  R              
Sbjct: 529 AVFGEIERPDTVAWSAMIAAL---GRHGDPRGAVAMAARMQQDGWR-------------- 571

Query: 502 PNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           P+  T++ VL  C     + +  +++H+  +     +D  V  A++ MYAK G +  A  
Sbjct: 572 PSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACN 631

Query: 561 VFDLMPVRNVITWNVIIMAY---GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
            FD +   +V  W  ++ AY   G +      L+L + M  +G     V P++VTF+ + 
Sbjct: 632 AFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDG-----VMPDKVTFVDIL 686

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC++ G + E    F  MK DYG+ P  +HY  +VD + R G +++A  LI M+P + +
Sbjct: 687 TACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVN 746

Query: 678 KAGAWSSLLGACRIHQNV----EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
           +   W +LL  C+   +      +GEI  +    L+P       L +  +  A  W++A 
Sbjct: 747 EI-IWFALLECCKSQNDAPRTQRVGEIIMKINNKLDP-------LGTGAHRVAARWEEAK 798

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VRK M + G++KEPG S I   + +H F+AGD SH  + +++  ++ ++  ++K+GY+P
Sbjct: 799 RVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEVDRITALIKKDGYIP 858

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           DT  VLH+V E++KE LL  HSE+LA+A+G +NTPPG  +RV KNLRVC DCH A+K  +
Sbjct: 859 DTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYA 918

Query: 854 KIESREIILRDVRRFHHF-KNGTCSCGDYW 882
           K+  REII+RD RRFHHF K+GTCSCGDYW
Sbjct: 919 KVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 247/540 (45%), Gaps = 27/540 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW + L +      +  A+  +  M    + PD   F  VL +V G+ D++ GK+IH+ V
Sbjct: 236 SWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMV 295

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +       S+ V   +V MY + GS + D  + FDRI +    +W  ++   CR G ++ 
Sbjct: 296 LDRELERDSM-VGTAVVKMYARIGS-IQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNS 353

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            ++    M    V+P+  T +++   C NL+  DG ++         R  + +  I  A+
Sbjct: 354 VMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAV 413

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + M+++   +  A+  F     + + ++  +++  + N +  EA+   ++M  R +  D 
Sbjct: 414 IGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADN 473

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           + +A  + AC+ +  L+ GK +H  A+   +  D+  V +ALVDMY  C  +E    VF 
Sbjct: 474 LVLAVAISACASIPDLEEGKALHCSAMDLGLHRDD-VVRTALVDMYSRCGSMEDASAVFG 532

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I       W+AMI   G++     A+ +  +M++  G  P+  TM  V+ AC  +    
Sbjct: 533 EIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQ-DGWRPSGATMVGVLAACAHAGMIE 591

Query: 404 D-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           +    +H   +  G   D  V+ A+M MY+++G I+ +   FD +E  D  +W TM+  Y
Sbjct: 592 EAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAY 651

Query: 463 TICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
              G++     AL L R MQ               + V+   P+ +T + +L  C     
Sbjct: 652 CRLGKYNASDRALKLARMMQQ--------------DGVM---PDKVTFVDILTACAYGGH 694

Query: 520 LAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           L + G+          L  ++    ALVD  A+ G L  A  +  ++P++ N I W  ++
Sbjct: 695 LQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALL 754



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S+ + F E   FLR +  R    D  S   VL  C+ L  +  G  +H + +R   +   
Sbjct: 39  SRGEDFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDH-IRRSRMEAE 97

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            FVG+ LV MY         RR+FD +    +  + A++  Y      +EAL + + +  
Sbjct: 98  RFVGNDLVFMYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKI-LHLAR 156

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +     + + ++  V A             H    + G   D  V  +L+ MYS  G IE
Sbjct: 157 LKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIE 216

Query: 439 ISKTIFDDMEVR----DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            +   FD   +R    D VSW  ++     C +H D +  L     M E+          
Sbjct: 217 AAVQAFDRAFLRAPSSDVVSWTKILAA---CNEHRDYIGALDLFDRMREQG--------- 264

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P+ I  +TVL     L  +A+GK IH+  +   L  D +VG+A+V MYA+ G 
Sbjct: 265 -----VVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGS 319

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A R FD +    V  W V++ AY   G    V+++L+ M AEG     VKPNEVTFI
Sbjct: 320 IQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEG-----VKPNEVTFI 374

Query: 615 ALFAACSH 622
            +   C +
Sbjct: 375 TILDTCKN 382



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 34/307 (11%)

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+  C R  A  +   +H H  +  +  +R+V N L+ MY+  G    ++ IFD +   +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            +S+  ++  Y   G   +AL +L           R   +  D ++         L   +
Sbjct: 129 VLSFTAIMRAYVTAGDPDEALKIL--------HLARLKAFKADPSM---------LAMAV 171

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD----LMPV 567
              G    L+ G+  H    R     D  V  +L+ MY+ CG +  A + FD      P 
Sbjct: 172 EAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPS 231

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            +V++W  I+ A   H +    L+L   M  +G     V P+ + F+ +  +    G ++
Sbjct: 232 SDVVSWTKILAACNEHRDYIGALDLFDRMREQG-----VVPDRICFVTVLDSVIGLGDIA 286

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG--AWSSL 685
           +G  + + M  D  +E        VV +  R G ++DA +  +      D+ G  AW+ L
Sbjct: 287 QGKRI-HSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFD----RIDQPGVAAWTVL 341

Query: 686 LGA-CRI 691
           +GA CR+
Sbjct: 342 VGAYCRL 348


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 339/565 (60%), Gaps = 23/565 (4%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N    + L++ Y    ++   R+VFD + D+K+  WNAMI G  Q E++EE L LF +M 
Sbjct: 24  NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
            + G  P+  T+ SV        +    + IHG+ IK GL  D  V ++L  MY R G++
Sbjct: 84  GL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           +  + +   M VR+ V+WNT+I G    G     L L + M+                 +
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK-----------------I 185

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              +PN IT +TVL  C  L+   +G++IHA AI+   ++ V V S+L+ MY+KCGCL  
Sbjct: 186 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 245

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A + F      + + W+ +I AYG HG+G E +EL   M  + +    ++ NEV F+ L 
Sbjct: 246 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN----MEINEVAFLNLL 301

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            ACSHSG+  +G++LF  M + YG +P   HY CVVDLLGRAG ++ A  +I  MP + D
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 361

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W +LL AC IH+N E+ +   + +  ++P+ ++ YVLL+N+++SA+ W    +VRK
Sbjct: 362 IV-IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            M++  V+KE G SW E   E+H+F  GD S  +S++++ +L+ L+  M+ +GY PDT+ 
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VLH+++EEEKE+ L  HSEKLA+AF ++  P G  IR+ KNLRVC+DCH A K+IS I++
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 540

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI LRD  RFHHF NG CSCGDYW
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 185/414 (44%), Gaps = 35/414 (8%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           R+ + N    N L+  Y + G + +A+ +F    DR L +WN +++ L Q +   E +  
Sbjct: 19  RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSL 78

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M   G  PD  ++ SV    + L  +  G++IH Y ++  + +D   V S+L  MY 
Sbjct: 79  FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYM 137

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +++ G  V   +  + +  WN +I G  QN   E  L L+ KM +++G  PN  T  
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFV 196

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +V+ +C         + IH  AIK+G      V ++L+ MYS+ G +  +   F + E  
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V W++MI+ Y   GQ  +A+ L      M E+ N              + N +  + +
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELF---NTMAEQTNM-------------EINEVAFLNL 300

Query: 511 LPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L  C       KG E     +  Y  +  L     V    VD+  + GCL+ A  +   M
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSM 356

Query: 566 PVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           P++ +++ W  ++ A  +H   +    + K ++       ++ PN+     L A
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL-------QIDPNDSACYVLLA 403



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 187/369 (50%), Gaps = 21/369 (5%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           +N L+N Y + G D+ +  KVFD + ++   +WN+MIA L +F   +  L  FR M    
Sbjct: 28  SNILINGYVRAG-DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86

Query: 176 VEPSSFTLVSVALACSNLSRRDGLR---LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
             P  +TL SV       S   GLR   +G+Q+HG +++ G E +  + ++L  MY + G
Sbjct: 87  FSPDEYTLGSV------FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 140

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMALRGIKPDGVSIASVL 290
           ++ D + + +S   R+LV+WNT++   +QN    E V++L + M + G +P+ ++  +VL
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVL 199

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +CS L +   G++IHA A++       + V S+L+ MY  C  +    + F    D+  
Sbjct: 200 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAFSEREDEDE 258

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK--EGI 408
            +W++MI+ YG +   +EA+ LF  M E   +  N     +++ AC  S    DK  E  
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS-GLKDKGLELF 317

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
                K G          ++D+  R G ++ ++ I   M ++ D V W T+++    C  
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA---CNI 374

Query: 468 HGDALMLLR 476
           H +A M  R
Sbjct: 375 HKNAEMAQR 383



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 8/252 (3%)

Query: 57  QFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           +F E  LS + EM      PD +   +V    AG++ +S+G+QIH + +KYG  L  V V
Sbjct: 70  EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV-V 128

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            ++L +MY + G  + D   V   +  ++ V+WN++I    + G  +  L  ++MM  S 
Sbjct: 129 NSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 187

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
             P+  T V+V  +CS+L+ R     G+Q+H  ++++G      ++++L++MY+K G + 
Sbjct: 188 CRPNKITFVTVLSSCSDLAIRGQ---GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPAC 293
           DA   F   ED D V W++++S+   + +  EA+     MA +  ++ + V+  ++L AC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304

Query: 294 SHLEMLDTGKEI 305
           SH  + D G E+
Sbjct: 305 SHSGLKDKGLEL 316



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 136/309 (44%), Gaps = 38/309 (12%)

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN------- 480
           M MYS++G    +  ++  M  ++ +S N +I GY   G   +A  +  EM +       
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 481 ------MEEEKNRNNVYDLDET-VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
                 ++ E N   +    E   L   P+  TL +V  G   L +++ G++IH Y I+ 
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            L  D+VV S+L  MY + G L     V   MPVRN++ WN +IM    +G  + VL L 
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           K M   G R     PN++TF+ + ++CS   +  +G  + +      G        + ++
Sbjct: 181 KMMKISGCR-----PNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLI 234

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----------------QNVEI 697
            +  + G + DA +  +    E +    WSS++ A   H                 N+EI
Sbjct: 235 SMYSKCGCLGDAAKAFS--EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 292

Query: 698 GEIAAQNLF 706
            E+A  NL 
Sbjct: 293 NEVAFLNLL 301



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M  S  +P+   F  VL + + +     G+QIHA  +K G   S V V ++L++MY 
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA-SSVVAVVSSLISMYS 238

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTL 183
           KCG  + D  K F    ++D+V W+SMI+     G+ D A+E F  M   +N+E +    
Sbjct: 239 KCGC-LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297

Query: 184 VSVALACSNLSRRD-GLRL-GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           +++  ACS+   +D GL L    V     + G +  T +++ L     + G +D A+ + 
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL----GRAGCLDQAEAII 353

Query: 241 KSFEDR-DLVSWNTIVSS 257
           +S   + D+V W T++S+
Sbjct: 354 RSMPIKTDIVIWKTLLSA 371


>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
 gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
          Length = 621

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/630 (37%), Positives = 357/630 (56%), Gaps = 55/630 (8%)

Query: 278 GIKPDGV-----SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           G KP           S+L  C H   +     I+A  +RN    D  FV   L+ +  N 
Sbjct: 22  GTKPKNTPNRRRHFISLLQNCKHNNQIPP---IYAKIIRNHHHQD-PFVVFELLRVCSNL 77

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             +    ++F    +  + L+ A+I G   + Y  + + L+ +M   + L P++  ++SV
Sbjct: 78  NSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMIN-SSLVPDSYAVTSV 136

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME---- 448
           + AC    A  +   +H   +KLGL  +R ++  L+++Y + G  E ++ +FD+M     
Sbjct: 137 LKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDV 196

Query: 449 --------------VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
                         ++DTV W  MI G    G+   AL + R MQ               
Sbjct: 197 VASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQR-------------- 242

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           E V+   PN +T++ VL  C  L AL  G+ + +Y  ++ +  +  VG AL++MY++CG 
Sbjct: 243 EDVM---PNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGD 299

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           ++ A+RVF+ M  +NVIT+N +IM + +HG+  E +EL + ++ +G       P+ VTF+
Sbjct: 300 IDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQG-----FTPSSVTFV 354

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM-- 672
            +  ACSH G+   G ++F+ M  DYGIEP  +HY C+VDLLGR G++E+AY  I MM  
Sbjct: 355 GVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKV 414

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
            P+    GA   LL AC+IH N+E+ E  A++L   +   +  Y+LLSN YSS+  W +A
Sbjct: 415 APDHVMLGA---LLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEA 471

Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
            +VR  M+E G+ KEPGCS IE  +EIH+FL GD  H Q E+++  LE L++ +R EGY 
Sbjct: 472 AEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYT 531

Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
           P T  VLH++ + EKE  L  HSE+LAI +G+++T P TT+RV KNLRVCNDCH   K I
Sbjct: 532 PATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLI 591

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           S I  R+I++RD  RFHHF+NG CSCGDYW
Sbjct: 592 SNITRRKIVVRDRNRFHHFENGVCSCGDYW 621



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 26/268 (9%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + + I  Y +M  S + PD++A  +VLKA      L  G+++H+ V+K G   S+ ++  
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLS-SNRSIRI 169

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITE------------------KDQVSWNSMIATLCRFG 159
            L+ +YGKCG+   D  +VFD + E                  KD V W +MI  L R G
Sbjct: 170 KLIELYGKCGA-FEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNG 228

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVGEWNT 217
           + + ALE FR M   +V P+  T+V V  ACS L     L+LGR V    +  R+ E N 
Sbjct: 229 ESNRALEVFRNMQREDVMPNEVTIVCVLSACSELG---ALQLGRWVRSYMDKHRI-ELNH 284

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F+  AL+ MY++ G +D+A+ +F+  ++++++++N+++   + + K +EAV   R +  +
Sbjct: 285 FVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQ 344

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
           G  P  V+   VL ACSH  + + G EI
Sbjct: 345 GFTPSSVTFVGVLNACSHGGLAELGFEI 372



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 173/373 (46%), Gaps = 29/373 (7%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+F      +   + ++I  L     +   +  +  M+ S++ P S+ + SV  AC    
Sbjct: 85  KIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC-- 142

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS--- 250
               L+ GR+VH   L++G   N  I   L+ +Y K G  +DA+ +F    +RD+V+   
Sbjct: 143 -HLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTV 201

Query: 251 ---------------WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
                          W  ++  L +N +   A+   R M    + P+ V+I  VL ACS 
Sbjct: 202 MINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSE 261

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L  L  G+ + +Y  ++ I + N FVG AL++MY  C +++  +RVF+ + +K +  +N+
Sbjct: 262 LGALQLGRWVRSYMDKHRIEL-NHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNS 320

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE-AFPDKEGIHGHAIK 414
           MI G+  +    EA+ LF  + +  G  P++ T   V+ AC     A    E  H  A  
Sbjct: 321 MIMGFALHGKSVEAVELFRGLIK-QGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKD 379

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALM 473
            G+         ++D+  R+GR+E + +    M+V  D V    +++    C  HG+  +
Sbjct: 380 YGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSA---CKIHGNLEL 436

Query: 474 LLREMQNMEEEKN 486
             R  +++   KN
Sbjct: 437 AERVAKSLVACKN 449



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 202/454 (44%), Gaps = 52/454 (11%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F++  L+ + + L  +  A  +F   ++ ++  +  ++  L  +  + + +    QM 
Sbjct: 63  DPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMI 122

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              + PD  ++ SVL AC     L  G+E+H+  L+   L  N  +   L+++Y  C   
Sbjct: 123 NSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLG-LSSNRSIRIKLIELYGKCGAF 181

Query: 336 ECGRRVFDFISDKKI------------------ALWNAMITGYGQNEYDEEALMLFIKME 377
           E  RRVFD + ++ +                    W AMI G  +N     AL +F  M+
Sbjct: 182 EDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQ 241

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
               + PN  T+  V+ AC    A      +  +  K  +  + +V  AL++MYSR G I
Sbjct: 242 R-EDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDI 300

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + ++ +F+ M+ ++ +++N+MI G+ + G+  +A+ L R +                   
Sbjct: 301 DEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQG--------------- 345

Query: 498 LRPKPNSITLMTVLPGC--GALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAKCGC 554
               P+S+T + VL  C  G L+ L  G EI H+ A    +   +     +VD+  + G 
Sbjct: 346 --FTPSSVTFVGVLNACSHGGLAEL--GFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGR 401

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVA-EGSRGGEVKPNEVT 612
           L  A     +M V  + +    ++ A  +HG  +    + K++VA + +  G       T
Sbjct: 402 LEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSG-------T 454

Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           +I L  A S SG   E  ++   M+++ GIE  P
Sbjct: 455 YILLSNAYSSSGKWKEAAEVRTNMREE-GIEKEP 487



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 40/255 (15%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T C  + I+ L     SN+   A+  +  M R D+ P+      VL A + +  L LG+ 
Sbjct: 214 TVCWTAMIDGLVRNGESNR---ALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRW 270

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           + +++ K+   L+   V   L+NMY +CG D+ +  +VF+++ EK+ +++NSMI      
Sbjct: 271 VRSYMDKHRIELNHF-VGGALINMYSRCG-DIDEAQRVFEQMKEKNVITYNSMIMGFALH 328

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           GK   A+E FR ++     PSS T V V  ACS              HG    + E    
Sbjct: 329 GKSVEAVELFRGLIKQGFTPSSVTFVGVLNACS--------------HGG---LAELGFE 371

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           I +++   Y    +++                +  +V  L +  +  EA  F+R M    
Sbjct: 372 IFHSMAKDYGIEPQIEH---------------YGCMVDLLGRLGRLEEAYSFIRMMK--- 413

Query: 279 IKPDGVSIASVLPAC 293
           + PD V + ++L AC
Sbjct: 414 VAPDHVMLGALLSAC 428


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 339/565 (60%), Gaps = 23/565 (4%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N    + L++ Y    ++   R+VFD + D+K+  WNAMI G  Q E++EE L LF +M 
Sbjct: 22  NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 81

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
            + G  P+  T+ SV        +    + IHG+ IK GL  D  V ++L  MY R G++
Sbjct: 82  GL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 140

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           +  + +   M VR+ V+WNT+I G    G     L L + M+                 +
Sbjct: 141 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK-----------------I 183

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              +PN IT +TVL  C  L+   +G++IHA AI+   ++ V V S+L+ MY+KCGCL  
Sbjct: 184 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 243

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A + F      + + W+ +I AYG HG+G E +EL   M  + +    ++ NEV F+ L 
Sbjct: 244 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN----MEINEVAFLNLL 299

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            ACSHSG+  +G++LF  M + YG +P   HY CVVDLLGRAG ++ A  +I  MP + D
Sbjct: 300 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 359

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
               W +LL AC IH+N E+ +   + +  ++P+ ++ YVLL+N+++SA+ W    +VRK
Sbjct: 360 IV-IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 418

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            M++  V+KE G SW E   E+H+F  GD S  +S++++ +L+ L+  M+ +GY PDT+ 
Sbjct: 419 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 478

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           VLH+++EEEKE+ L  HSEKLA+AF ++  P G  IR+ KNLRVC+DCH A K+IS I++
Sbjct: 479 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 538

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI LRD  RFHHF NG CSCGDYW
Sbjct: 539 REITLRDGSRFHHFINGKCSCGDYW 563



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 185/414 (44%), Gaps = 35/414 (8%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           R+ + N    N L+  Y + G + +A+ +F    DR L +WN +++ L Q +   E +  
Sbjct: 17  RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSL 76

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M   G  PD  ++ SV    + L  +  G++IH Y ++  + +D   V S+L  MY 
Sbjct: 77  FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYM 135

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +++ G  V   +  + +  WN +I G  QN   E  L L+ KM +++G  PN  T  
Sbjct: 136 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFV 194

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +V+ +C         + IH  AIK+G      V ++L+ MYS+ G +  +   F + E  
Sbjct: 195 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 254

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V W++MI+ Y   GQ  +A+ L      M E+ N              + N +  + +
Sbjct: 255 DEVMWSSMISAYGFHGQGDEAIELF---NTMAEQTNM-------------EINEVAFLNL 298

Query: 511 LPGCGALSALAKGKE-----IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           L  C       KG E     +  Y  +  L     V    VD+  + GCL+ A  +   M
Sbjct: 299 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSM 354

Query: 566 PVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           P++ +++ W  ++ A  +H   +    + K ++       ++ PN+     L A
Sbjct: 355 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL-------QIDPNDSACYVLLA 401



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 187/369 (50%), Gaps = 21/369 (5%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           +N L+N Y + G D+ +  KVFD + ++   +WN+MIA L +F   +  L  FR M    
Sbjct: 26  SNILINGYVRAG-DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 84

Query: 176 VEPSSFTLVSVALACSNLSRRDGLR---LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
             P  +TL SV       S   GLR   +G+Q+HG +++ G E +  + ++L  MY + G
Sbjct: 85  FSPDEYTLGSV------FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 138

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL-RQMALRGIKPDGVSIASVL 290
           ++ D + + +S   R+LV+WNT++   +QN    E V++L + M + G +P+ ++  +VL
Sbjct: 139 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVL 197

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +CS L +   G++IHA A++       + V S+L+ MY  C  +    + F    D+  
Sbjct: 198 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAFSEREDEDE 256

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK--EGI 408
            +W++MI+ YG +   +EA+ LF  M E   +  N     +++ AC  S    DK  E  
Sbjct: 257 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS-GLKDKGLELF 315

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
                K G          ++D+  R G ++ ++ I   M ++ D V W T+++    C  
Sbjct: 316 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA---CNI 372

Query: 468 HGDALMLLR 476
           H +A M  R
Sbjct: 373 HKNAEMAQR 381



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 8/252 (3%)

Query: 57  QFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           +F E  LS + EM      PD +   +V    AG++ +S+G+QIH + +KYG  L  V V
Sbjct: 68  EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV-V 126

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            ++L +MY + G  + D   V   +  ++ V+WN++I    + G  +  L  ++MM  S 
Sbjct: 127 NSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 185

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
             P+  T V+V  +CS+L+ R     G+Q+H  ++++G      ++++L++MY+K G + 
Sbjct: 186 CRPNKITFVTVLSSCSDLAIRGQ---GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 242

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPAC 293
           DA   F   ED D V W++++S+   + +  EA+     MA +  ++ + V+  ++L AC
Sbjct: 243 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 302

Query: 294 SHLEMLDTGKEI 305
           SH  + D G E+
Sbjct: 303 SHSGLKDKGLEL 314



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 38/307 (12%)

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN--------- 480
           MYS++G    +  ++  M  ++ +S N +I GY   G   +A  +  EM +         
Sbjct: 1   MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60

Query: 481 ----MEEEKNRNNVYDLDET-VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
               ++ E N   +    E   L   P+  TL +V  G   L +++ G++IH Y I+  L
Sbjct: 61  IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 120

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             D+VV S+L  MY + G L     V   MPVRN++ WN +IM    +G  + VL L K 
Sbjct: 121 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 180

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M   G R     PN++TF+ + ++CS   +  +G  + +      G        + ++ +
Sbjct: 181 MKISGCR-----PNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISM 234

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH----------------QNVEIGE 699
             + G + DA +  +    E +    WSS++ A   H                 N+EI E
Sbjct: 235 YSKCGCLGDAAKAFS--EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 292

Query: 700 IAAQNLF 706
           +A  NL 
Sbjct: 293 VAFLNLL 299



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 11/198 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M  S  +P+   F  VL + + +     G+QIHA  +K G   S V V ++L++MY 
Sbjct: 178 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA-SSVVAVVSSLISMYS 236

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTL 183
           KCG  + D  K F    ++D+V W+SMI+     G+ D A+E F  M   +N+E +    
Sbjct: 237 KCGC-LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 295

Query: 184 VSVALACSNLSRRD-GLRL-GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
           +++  ACS+   +D GL L    V     + G +  T +++ L     + G +D A+ + 
Sbjct: 296 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL----GRAGCLDQAEAII 351

Query: 241 KSFEDR-DLVSWNTIVSS 257
           +S   + D+V W T++S+
Sbjct: 352 RSMPIKTDIVIWKTLLSA 369


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/586 (40%), Positives = 348/586 (59%), Gaps = 29/586 (4%)

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+++H  ALR+ +   +++  SAL+ MY +C      RR FD I      +  AM +G  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE---GIHGHAIKLGLG 418
           +N      L +F  M  VA         ++ + A   S   PD+    GIH    K+GL 
Sbjct: 167 RNNLVYTTLSIFRSM--VASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLD 224

Query: 419 RDRYVQNALMDMYSRMGRIEI--SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
               V N ++D Y++ G  ++  ++ +FD M+ RD VSWNTMI  Y   G   +AL L  
Sbjct: 225 GQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYS 283

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           +M  +  +                + N++TL  VL  C    A+  GK IH   +R  L 
Sbjct: 284 KMLIVGGDV---------------RCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLE 328

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            +V VG+++VDMY+KCG +  A + F  +  +N+++W+ +I  YGMHG GQE L +  +M
Sbjct: 329 DNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDM 388

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
              G     +KPN +TFI + AACSH+G++SEG   +  MK ++GIEP  +HY C+VDLL
Sbjct: 389 RKSG-----LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLL 443

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           GRAG +++AY LI  M  + D A  W +LL ACRI++NVE+ +I A+ LF L+   + +Y
Sbjct: 444 GRAGCLDEAYGLIKEMKVKPD-AALWGALLSACRIYKNVELAKICAERLFELDATNSGYY 502

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VLLSNIY+ A +W +   +R  +K  G+ K PG S +E   + H F  GD SH Q ++++
Sbjct: 503 VLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIY 562

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            +LE L ER+   GYVP+T  VLH+++ EE+E++L  HSEKLA+AF ++N+  G+ I V 
Sbjct: 563 AYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVI 622

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH A K I+K+  REII+RD++RFHHFK+G CSCGDYW
Sbjct: 623 KNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 16/378 (4%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+H   ++ G   S    A+ L++MY  C   + D  + FD I   + V   +M +  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPL-DARRAFDEIPTPNPVIVTAMASGC 165

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R       L  FR M+ S          +  +A S  +R     +   +H    ++G +
Sbjct: 166 MRNNLVYTTLSIFRSMVASG-SAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLD 224

Query: 215 WNTFIMNALMAMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
             T + N ++  YAK G  D   A+ LF    DRD+VSWNT+++  +QN    EA+    
Sbjct: 225 GQTGVANTIIDAYAKGGGHDLGAARKLF-DMMDRDVVSWNTMIALYAQNGLSTEALGLYS 283

Query: 273 QMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           +M + G  ++ + V++++VL AC+H   + TGK IH   +R   L DN +VG+++VDMY 
Sbjct: 284 KMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMG-LEDNVYVGTSVVDMYS 342

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C +VE   + F  I  K I  W+AMI GYG + Y +EAL +F  M + +GL PN  T  
Sbjct: 343 KCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRK-SGLKPNYITFI 401

Query: 391 SVVPACVRSEAFPDKEGIHGH-AIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDM 447
           +V+ AC  S A    EG + +  +K   G +  V++   ++D+  R G ++ +  +  +M
Sbjct: 402 TVLAAC--SHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEM 459

Query: 448 EVR-DTVSWNTMITGYTI 464
           +V+ D   W  +++   I
Sbjct: 460 KVKPDAALWGALLSACRI 477



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 9/218 (4%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSW 148
           + D  +   IHA V K G       VANT+++ Y K G  D+    K+FD + ++D VSW
Sbjct: 205 VPDRGITGGIHALVSKIGLD-GQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSW 262

Query: 149 NSMIATLCRFGKWDLALEAFRMMLY--SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           N+MIA   + G    AL  +  ML    +V  ++ TL +V LAC++      ++ G+++H
Sbjct: 263 NTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAG---AIQTGKRIH 319

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              +R+G E N ++  +++ MY+K G+V+ A   F+  + ++++SW+ +++    +    
Sbjct: 320 NQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQ 379

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           EA+     M   G+KP+ ++  +VL ACSH  +L  G+
Sbjct: 380 EALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGR 417


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/718 (34%), Positives = 380/718 (52%), Gaps = 70/718 (9%)

Query: 206 HGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           H N+ ++   + FI+   L + +A L R  D K    + ED  +V     V  L + ++F
Sbjct: 3   HSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVV-----VERLCRANRF 57

Query: 265 LEAV------MFLR---QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
            EA+        LR   Q+  R  KP   +  +++  CS    L+ GK++H + +R    
Sbjct: 58  GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH-IRTSGF 116

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN--------------------- 354
           +    + + L+ MY  C  +   R+VFD + ++ +  WN                     
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176

Query: 355 ----------AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
                     AM+TGY + +  EEAL+L+  M+ V    PN  T+S  V A    +    
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            + IHGH ++ GL  D  + ++LMDMY + G I+ ++ IFD +  +D VSW +MI  Y  
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
             +  +   L  E+    E                 +PN  T   VL  C  L+    GK
Sbjct: 297 SSRWREGFSLFSELVGSCE-----------------RPNEYTFAGVLNACADLTTEELGK 339

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           ++H Y  R          S+LVDMY KCG +  A+ V D  P  ++++W  +I     +G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
           +  E L+    ++  G+     KP+ VTF+ + +AC+H+G+V +G++ FY + + + +  
Sbjct: 400 QPDEALKYFDLLLKSGT-----KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
           + DHY C+VDLL R+G+ E    +I+ MP +  K   W+S+LG C  + N+++ E AAQ 
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF-LWASVLGGCSTYGNIDLAEEAAQE 513

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           LF +EP+    YV ++NIY++A  W++   +RK+M+E+GV K PG SW E   + H F+A
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIA 573

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D SH    Q+  FL  L ++M++EGYVP TS VLH+V +E+KE  L  HSEKLA+AF I
Sbjct: 574 ADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAI 633

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           L+T  GT I+V KNLR C DCH A KFIS I  R+I +RD  RFH F+NG CSCGDYW
Sbjct: 634 LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 224/482 (46%), Gaps = 65/482 (13%)

Query: 54  RSNQFREAI--LSYIEMTRSDIQ-------PDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           R+N+F EAI  L   ++ R  +Q       P    +  +++  +  + L  GK++H H+ 
Sbjct: 53  RANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +  + + N L+ MY KCGS + D  KVFD +  +D  SWN M+      G  + A
Sbjct: 113 TSGF-VPGIVIWNRLLRMYAKCGS-LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170

Query: 165 LEAFRMM--------------------------LYS------NVEPSSFTLVSVALACSN 192
            + F  M                          LYS      N  P+ FT   V++A + 
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT---VSIAVAA 227

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            +    +R G+++HG+ +R G + +  + ++LM MY K G +D+A+ +F    ++D+VSW
Sbjct: 228 AAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++    ++ ++ E      ++     +P+  + A VL AC+ L   + GK++H Y  R
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347

Query: 312 NDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
             +  D  SF  S+LVDMY  C  +E  + V D      +  W ++I G  QN   +EAL
Sbjct: 348 --VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYV 423
             F  + + +G  P+  T  +V+ AC  +       E F      H    +L    D Y 
Sbjct: 406 KYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH----RLSHTSDHYT 460

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDALMLLREMQNME 482
              L+D+ +R GR E  K++  +M ++ +   W +++ G +  G    A    +E+  +E
Sbjct: 461 --CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518

Query: 483 EE 484
            E
Sbjct: 519 PE 520



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 170/340 (50%), Gaps = 11/340 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +    + +Q  EA++ Y  M R  + +P+ F     + A A ++ +  GK+IH H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +V+ G     V + ++L++MYGKCG  + +   +FD+I EKD VSW SMI    +  +W 
Sbjct: 244 IVRAGLDSDEV-LWSSLMDMYGKCGC-IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
                F  ++ S   P+ +T   V  AC++L+  +   LG+QVHG   RVG +  +F  +
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE---LGKQVHGYMTRVGFDPYSFASS 358

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY K G ++ AK +       DLVSW +++   +QN +  EA+ +   +   G KP
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP 418

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V+  +VL AC+H  +++ G E          L   S   + LVD+       E  + V
Sbjct: 419 DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSV 478

Query: 342 FDFISDKKIA-LWNAMITG---YGQNEYDEEALMLFIKME 377
              +  K    LW +++ G   YG  +  EEA     K+E
Sbjct: 479 ISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/701 (36%), Positives = 380/701 (54%), Gaps = 62/701 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L+  Y+K G + + +  F+   DRD V+WN ++   S +     AV     M 
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM- 126

Query: 276 LRGIKPD--GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCN 331
           ++    +   V++ ++L   S    +  GK+IH   ++   L   S+  VGS L+DMY  
Sbjct: 127 MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK---LGFESYLLVGSPLLDMYSK 183

Query: 332 CREVECGRRVFDFISDKKIAL------------------------------WNAMITGYG 361
              +   ++VF  + D+   +                              W+AMI G  
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLA 243

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QN  ++EA+  F +M+ + GL  +     SV+PAC    A  D   IH   I+  L    
Sbjct: 244 QNGMEKEAIECFREMK-IEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
           YV +AL+DMY +   +  +KT+FD M+ ++ VSW  M+ GY   G+ G+A+ +  +MQ  
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQ-- 360

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                R+ +           P+  TL   +  C  +S+L +G + H  AI   L   + V
Sbjct: 361 -----RSGI----------DPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITV 405

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++LV +Y KCG ++ + R+F+ M VR+ ++W  ++ AY   G   E ++L   MV  G 
Sbjct: 406 SNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLG- 464

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
               +KP+ VT   + +ACS +G+V +G   F  M ++YGI PS  HY+C++DL  R+G+
Sbjct: 465 ----LKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGR 520

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
           +E+A   IN MP   D  G W++LL ACR   N+EIG+ AA++L  L+P   + Y LLS+
Sbjct: 521 IEEAMGFINGMPFRPDAIG-WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 579

Query: 722 IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
           IY+S   WD    +R+ MKE  VRKEPG SWI++  ++H F A D S   S+Q++  LE 
Sbjct: 580 IYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEE 639

Query: 782 LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           L +++   GY PDTS V H+V E  K  +L  HSE+LAIAFG++  P G  IRV KNLRV
Sbjct: 640 LYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRV 699

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH ATK IS +  REI++RD  RFH FK+GTCSCGD+W
Sbjct: 700 CVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 262/554 (47%), Gaps = 60/554 (10%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           R   + +  + R+   P+ F    ++ A A I+       I+A  V  G    ++   N 
Sbjct: 20  RHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRS-----SIYARRVFDGIPQPNLFSWNN 74

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L+  Y K G  + ++ + F+++ ++D V+WN +I      G    A++A+  M+      
Sbjct: 75  LLLAYSKSG-HLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF--S 131

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           S+ T V++       S    + LG+Q+HG  +++G E    + + L+ MY+K+G + DAK
Sbjct: 132 SNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191

Query: 238 TLFKSFEDR------------------------------DLVSWNTIVSSLSQNDKFLEA 267
            +F   +DR                              D VSW+ ++  L+QN    EA
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +   R+M + G+K D     SVLPAC  L  ++ G++IHA  +R + L D+ +VGSAL+D
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN-LQDHIYVGSALID 310

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MYC C+ +   + VFD +  K +  W AM+ GYGQ     EA+ +F+ M+  +G+ P+  
Sbjct: 311 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQR-SGIDPDHY 369

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T+   + AC    +  +    HG AI  GL     V N+L+ +Y + G I+ S  +F++M
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
            VRD VSW  M++ Y   G+  +A+ L  +M                   L  KP+ +TL
Sbjct: 430 NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKM-----------------VQLGLKPDGVTL 472

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
             V+  C     + KG+      I    +       S ++D++++ G +  A    + MP
Sbjct: 473 TGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP 532

Query: 567 VR-NVITWNVIIMA 579
            R + I W  ++ A
Sbjct: 533 FRPDAIGWTTLLSA 546



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 156/294 (53%), Gaps = 6/294 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   ++  A++   +EAI  + EM    ++ D + F +VL A  G+  ++ G+QIHA +
Sbjct: 234 SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI 293

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++       + V + L++MY KC    +    VFDR+ +K+ VSW +M+    + G+   
Sbjct: 294 IRTNL-QDHIYVGSALIDMYCKCKCLHY-AKTVFDRMKQKNVVSWTAMVVGYGQTGRAGE 351

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNA 222
           A++ F  M  S ++P  +TL     AC+N+S    L  G Q HG ++  G  +   + N+
Sbjct: 352 AVKIFLDMQRSGIDPDHYTLGQAISACANIS---SLEEGSQFHGKAITAGLIHYITVSNS 408

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G +DD+  LF     RD VSW  +VS+ +Q  + +EA+    +M   G+KPD
Sbjct: 409 LVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPD 468

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           GV++  V+ ACS   +++ G+      +    ++ ++   S ++D++     +E
Sbjct: 469 GVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIE 522



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++ +  EA+  +++M RS I PD++     + A A I  L  G Q H   
Sbjct: 335 SWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKA 394

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G  +  +TV+N+LV +YGKCG D+ D  ++F+ +  +D+VSW +M++   +FG+   
Sbjct: 395 ITAGL-IHYITVSNSLVTLYGKCG-DIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVE 452

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA- 222
           A++ F  M+   ++P   TL  V  ACS    R GL    Q +   L + E+     N  
Sbjct: 453 AIQLFDKMVQLGLKPDGVTLTGVISACS----RAGLVEKGQRY-FELMINEYGIVPSNGH 507

Query: 223 ---LMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
              ++ ++++ GR+++A         R D + W T++S+
Sbjct: 508 YSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 40/301 (13%)

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           S+ +  C+   A    + IHG+ I+     + ++ N ++  Y+ +     ++ +FD +  
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQ-NMEEEKNRNNV--------YDLDETV--- 497
            +  SWN ++  Y+  G        L EM+   E+  +R+ V        Y L   V   
Sbjct: 67  PNLFSWNNLLLAYSKSGH-------LSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 119

Query: 498 ----------LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                            +TLMT+L    +   ++ GK+IH   I+    + ++VGS L+D
Sbjct: 120 VKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLD 179

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY+K GC++ A++VF  +  RN + +N ++      G  ++ L+L + M          +
Sbjct: 180 MYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM----------E 229

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            + V++ A+    + +GM  E ++ F +MK + G++     +  V+   G  G + D  Q
Sbjct: 230 KDSVSWSAMIKGLAQNGMEKEAIECFREMKIE-GLKMDQYPFGSVLPACGGLGAINDGRQ 288

Query: 668 L 668
           +
Sbjct: 289 I 289


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/679 (34%), Positives = 377/679 (55%), Gaps = 56/679 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F++ ++ + + WNT++   + +   + ++     M   G+ P+  +   +L +C+ 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 296 LEMLDTGKEIHAYALR----NDILIDNSFVG--------------------------SAL 325
            +    G++IH   L+     D+ +  S +                           +AL
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           +  Y +  ++   +++FD I  K +  WNAMI+GY +    +EAL LF +M ++  + P+
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM-NVRPD 195

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
            +T  +V+ AC  S +      +H      G   +  + NAL+D+YS+ G +E +  +F 
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D +SWNT+I GYT    + +AL+L +EM    E                  PN +
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-----------------TPNDV 298

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFD 563
           T+++VLP C  L A+  G+ IH Y  + +  +     + ++L+DMYAKCG +  A +VF+
Sbjct: 299 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 358

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            M  +++ +WN +I  + MHG      +L   M   G     ++P+++TF+ L +ACSHS
Sbjct: 359 SMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG-----IEPDDITFVGLLSACSHS 413

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           GM+  G  +F  M  DY + P  +HY C++DLLG +G  ++A ++IN M  E D    W 
Sbjct: 414 GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWC 472

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           SLL AC++H NVE+ E  AQNL  +EP+  S Y+LLSNIY+SA  W+    +R  +    
Sbjct: 473 SLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKC 532

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           ++K PGCS IE    + +F+ GD  H Q+ +++G LE +   + + G+VPDTS VL  + 
Sbjct: 533 MKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEME 592

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           EE KE  L  HSEKLAIAFG+++T PGT + + KNLRVC +CH+ATK +SKI  REI+ R
Sbjct: 593 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVAR 652

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF++G CSC DYW
Sbjct: 653 DRTRFHHFRDGVCSCNDYW 671



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 245/508 (48%), Gaps = 56/508 (11%)

Query: 11  LPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTR 70
           +PSP    L    P AT+         Q   +  W   +R  A S+    ++  Y+ M  
Sbjct: 6   VPSPHFDGL----PYATSV----FETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVS 57

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM 130
             + P+++ FP +LK+ A  +  + G+QIH  V+K G+ L  + V  +L++MY +    +
Sbjct: 58  LGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLD-LYVHTSLISMYVQ-NWRL 115

Query: 131 WDVYKVFDR-------------------------------ITEKDQVSWNSMIATLCRFG 159
            D YKVFDR                               I  KD VSWN+MI+     G
Sbjct: 116 EDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETG 175

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
            +  ALE F  M+  NV P   T V+V  AC++      + LGRQVH      G + N  
Sbjct: 176 CYKEALELFEEMMKMNVRPDESTYVTVLSACAH---SGSIELGRQVHSWVDDHGFDSNLK 232

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           I+NAL+ +Y+K G V+ A  LF+    +D++SWNT++   +  + + EA++  ++M   G
Sbjct: 233 IVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 292

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN-SFVGSALVDMYCNCREVEC 337
             P+ V++ SVLPAC+HL  +D G+ IH Y  +    + N S + ++L+DMY  C ++E 
Sbjct: 293 ETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 352

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             +VF+ +  K ++ WNAMI G+  +   + +  LF +M ++ G+ P+  T   ++ AC 
Sbjct: 353 AHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI-GIEPDDITFVGLLSACS 411

Query: 398 RSEAFPDKEGIH---GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
            S        I        K+    + Y    ++D+    G  + ++ + + ME+  D V
Sbjct: 412 HSGMLDLGRHIFRSMTQDYKMTPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGV 469

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNM 481
            W +++     C  HG+  +     QN+
Sbjct: 470 IWCSLLKA---CKMHGNVELAESFAQNL 494



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 38/242 (15%)

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L +A  VF+ +   N + WN +I  + +  +    L L   MV+ G     + PN  TF 
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLG-----LLPNSYTFP 68

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            L  +C+ S   +EG  +  ++    G +     +  ++ +  +  ++EDAY++      
Sbjct: 69  FLLKSCAKSKTFTEGQQIHGQVL-KLGFDLDLYVHTSLISMYVQNWRLEDAYKV------ 121

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLFLLEP--DVASHYVLLSNIYSSAQLWDK 731
            FD++     +     I      G+I +AQ LF   P  DV S   ++S  Y+    + +
Sbjct: 122 -FDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISG-YAETGCYKE 179

Query: 732 AMDVRKKMKEMGVRKE--------PGCSW---IEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           A+++ ++M +M VR +          C+    IE G ++H ++            HGF  
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDD----------HGFDS 229

Query: 781 NL 782
           NL
Sbjct: 230 NL 231


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/810 (32%), Positives = 428/810 (52%), Gaps = 57/810 (7%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI----TEKDQV 146
           +DLSLG+  H  + + GY L +  VA +L+ MY  CG ++    + FDR        D V
Sbjct: 178 RDLSLGRFFHDTIRRCGYDLDA-GVAISLIGMYSNCG-EIEAAVQAFDRAFLRAPSSDVV 235

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
           SW  ++A       +  AL+ F  M    V P     V+V  +   L     +  G+++H
Sbjct: 236 SWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLG---DIAQGKRIH 292

Query: 207 GNSL-RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              L R  E ++ I  A++ MYA++G + DA   F   +   + +W  ++ +  +   F 
Sbjct: 293 SMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFN 352

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA--LRNDILIDNSFVGS 323
             +  L +M   G+KP+ V+  ++L  C +L + D GK+I A A   +   L  ++ +G+
Sbjct: 353 SVMQILERMEAEGVKPNEVTFITILDTCKNLALED-GKKIQALASEQQQRSLDASARIGT 411

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAG 381
           A++ M+     +   R  FD IS K +A + AMI GY  N+   EAL +F +M    VA 
Sbjct: 412 AVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAA 471

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
              +   ++  + AC       + + +H  A+ LGL RD  V+ AL+DMYSR G +E + 
Sbjct: 472 ---DNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDAS 528

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +F ++E  DT++W+ MI      G+HGD    +     M+++  R              
Sbjct: 529 AVFGEIERPDTIAWSAMIAAL---GRHGDPRGAVAMAARMQQDGWR-------------- 571

Query: 502 PNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           P   T++ VL  C     + +  +++H+  +     +D  V  A++ MYAK G +  A  
Sbjct: 572 PTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACN 631

Query: 561 VFDLMPVRNVITWNVIIMAY---GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
            FD +   +V  W  ++ AY   G +      L+L + M  +G     V P++VTF+ + 
Sbjct: 632 AFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDG-----VMPDKVTFVDIL 686

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC++ G + E    F  MK DYG+ P  +HY  +VD + R G +++A  LI M+P + +
Sbjct: 687 TACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVN 746

Query: 678 KAGAWSSLLGACRIHQNV----EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
           +   W +LL  C+   +      +GEI  +    L+P       L +  +  A  W++A 
Sbjct: 747 EI-IWFALLECCKSQNDAPRTQRVGEIIMKINNKLDP-------LGTGAHRVAARWEEAK 798

Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
            VRK M + G++KEPG S I   + +H F+AGD SH  + +++  ++ ++  ++K+GY+P
Sbjct: 799 RVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEVDRITALIKKDGYIP 858

Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
           DT  VLH+V E++KE LL  HSE+LA+A+G +NTPPG  +RV KNLRVC DCH A+K  +
Sbjct: 859 DTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDCHTASKLYA 918

Query: 854 KIESREIILRDVRRFHHF-KNGTCSCGDYW 882
           K+  REII+RD RRFHHF K+GTCSCGDYW
Sbjct: 919 KVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 27/540 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW + L +      +  A+  +  M    + PD   F  VL +V G+ D++ GK+IH+ V
Sbjct: 236 SWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMV 295

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +       S+ +   +V MY + GS + D  + FDRI +    +W  +I   CR G ++ 
Sbjct: 296 LDRELERDSM-IGTAVVKMYARIGS-IQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNS 353

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            ++    M    V+P+  T +++   C NL+  DG ++         R  + +  I  A+
Sbjct: 354 VMQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAV 413

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + M+++   +  A+  F     + + ++  +++  + N +  EA+   ++M  R +  D 
Sbjct: 414 IGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADN 473

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           + +A  + AC+ +  L+ GK +H  A+   +  D+  V +ALVDMY  C  +E    VF 
Sbjct: 474 LVLAVAISACASIPDLEEGKALHCSAMDLGLHRDD-VVRTALVDMYSRCGSMEDASAVFG 532

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I       W+AMI   G++     A+ +  +M++  G  P   TM  V+ AC  +    
Sbjct: 533 EIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQ-DGWRPTGATMVGVLAACAHAGMME 591

Query: 404 D-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           +    +H   +  G   D  V+ A+M MY+++G I+ +   FD +E  D  +W TM+  Y
Sbjct: 592 EAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAY 651

Query: 463 TICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
              G++     AL L R MQ               + V+   P+ +T + +L  C     
Sbjct: 652 CRLGKYNASDRALKLARMMQQ--------------DGVM---PDKVTFVDILTACAYGGH 694

Query: 520 LAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           L + G+          L  ++    ALVD  A+ G L  A  +  ++P++ N I W  ++
Sbjct: 695 LQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALL 754



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S+ ++F E   FLR +  R    D  S   VL  C+ L  +  G  +H + +R   +   
Sbjct: 39  SRGEEFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDH-IRRSRMEAE 97

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            FVG+ LV MY         RR+FD +    I  + A++  Y      +EAL + + +  
Sbjct: 98  RFVGNDLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKI-LHLAR 156

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +     +   ++  V A             H    + G   D  V  +L+ MYS  G IE
Sbjct: 157 LKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIE 216

Query: 439 ISKTIFDDMEVR----DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
            +   FD   +R    D VSW  ++     C +H D +  L     M E+          
Sbjct: 217 AAVQAFDRAFLRAPSSDVVSWTKILAA---CNEHRDYIGALDLFDRMREQG--------- 264

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P+ I  +TVL     L  +A+GK IH+  +   L  D ++G+A+V MYA+ G 
Sbjct: 265 -----VVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGS 319

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A R FD +    V  W V+I AY   G    V+++L+ M AEG     VKPNEVTFI
Sbjct: 320 IQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEG-----VKPNEVTFI 374

Query: 615 ALFAACSH 622
            +   C +
Sbjct: 375 TILDTCKN 382



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 34/307 (11%)

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+  C R  A  +   +H H  +  +  +R+V N L+ MY+  G    ++ IFD +   +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            +S+  ++  Y   G   +AL +L           R   +  D  +         L   +
Sbjct: 129 ILSFTAIMRAYVTAGDPDEALKIL--------HLARLKAFKADPPM---------LAMAV 171

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD----LMPV 567
              G    L+ G+  H    R     D  V  +L+ MY+ CG +  A + FD      P 
Sbjct: 172 EAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPS 231

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            +V++W  I+ A   H +    L+L   M  +G     V P+ + F+ +  +    G ++
Sbjct: 232 SDVVSWTKILAACNEHRDYIGALDLFDRMREQG-----VVPDRICFVTVLDSVIGLGDIA 286

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG--AWSSL 685
           +G  + + M  D  +E        VV +  R G ++DA +  +      D+ G  AW+ L
Sbjct: 287 QGKRI-HSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFD----RIDQPGVAAWTVL 341

Query: 686 LGA-CRI 691
           +GA CR+
Sbjct: 342 IGAYCRL 348


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/796 (32%), Positives = 422/796 (53%), Gaps = 32/796 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    E + +Y +M R  +  +  AF  V+     +++   G Q+ +HV
Sbjct: 112 SWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHV 171

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +  G   + V+VAN+L+ M+G  G  + D  K+FDR+ E D +S N+MI+     G    
Sbjct: 172 IVSGLQ-NQVSVANSLITMFGNLGR-VQDAEKLFDRMEEHDTISRNAMISMYSHQGICSK 229

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
               F  M +  + P + TL S+   C++    D    G  +H   LR   + +  ++NA
Sbjct: 230 CFLVFSDMRHHGLRPDATTLCSLMSVCAS---ADHFSHGSGIHSLCLRSSLDSSVTVINA 286

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+  G++ DA+ LF +   RDL+SWNT++SS  QN    +A+  L Q+      P+
Sbjct: 287 LVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPN 346

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            ++ +S L ACS    L  GK +HA  L+   L  N  VG++L+ MY  C  +E   +VF
Sbjct: 347 HLTFSSALGACSSPGALIDGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVF 405

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +    +  +N +I GY   E   +A+ +F  +   AG+ PN  TM ++  +   S   
Sbjct: 406 QSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRS-AGIKPNYITMINIHGSFTSSNDL 464

Query: 403 PD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
            +    +H + I+ G   D YV N+L+ MY++ G +E S  IF+ +  ++ VSWN +I  
Sbjct: 465 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 524

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   +AL L  +MQ+   + +R                 + L   L  C +L++L 
Sbjct: 525 NAQLGHGEEALKLFIDMQHAGNKLDR-----------------VCLAECLSSCASLASLE 567

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G ++H   +++ L +D  V +A +DMY KCG +N   ++     +R    WN +I  Y 
Sbjct: 568 EGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYA 627

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            +G  +E  E  K MVA G      KP+ VTF+AL +ACSH+G+V +G+D +  M   +G
Sbjct: 628 KYGYFKEAEETFKQMVAMGR-----KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFG 682

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P   H  C+VDLLGR G+  +A + I  MP        W SLL + R H+N+EIG  A
Sbjct: 683 VSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPV-LPNDLIWRSLLSSSRTHKNLEIGRKA 741

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ L  L+P   S YVLLSN+Y++   W     +R  MK + + K P CSW++  +E+  
Sbjct: 742 AKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVST 801

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD  H+ +E+++  L+ +  ++R+ GY+ DTS  LH+ +EE+KE  L  HSEKLA+A
Sbjct: 802 FGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALA 861

Query: 822 FGILNTPPGTTIRVAK 837
           +G++  P G+T ++ +
Sbjct: 862 YGLIVVPEGSTCQMGE 877



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 171/655 (26%), Positives = 309/655 (47%), Gaps = 41/655 (6%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           + ++ G  IHA   + G  + +V +   L+++YG  G  + D  ++F  + E++ VSW +
Sbjct: 58  EGIACGAAIHALTHRAGL-MGNVYIGTALLHLYGSRGI-VSDARRLFWEMPERNVVSWTA 115

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR-DGLRLGRQVHGNS 209
           ++  L   G  +  L A+R M    V  ++    +V   C +L     GL++   V  + 
Sbjct: 116 LMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSG 175

Query: 210 LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           L   +    + N+L+ M+  LGRV DA+ LF   E+ D +S N ++S  S      +  +
Sbjct: 176 L---QNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFL 232

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDM 328
               M   G++PD  ++ S++  C+  +    G  IH+  LR+   +D+S  V +ALV+M
Sbjct: 233 VFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSS--LDSSVTVINALVNM 290

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y    ++     +F  +S + +  WN MI+ Y QN    +AL    ++     + PN  T
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI-PNHLT 349

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            SS + AC    A  D + +H   ++L L R+  V N+L+ MY +   +E ++ +F  M 
Sbjct: 350 FSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
             D VS+N +I GY +      A+ +   +++                    KPN IT++
Sbjct: 410 THDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAG-----------------IKPNYITMI 452

Query: 509 TVLPGCGALSALAK-GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +     + + L   G+ +HAY IR    +D  V ++L+ MYAKCG L  +  +F+ +  
Sbjct: 453 NIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 512

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           +N+++WN II A    G G+E L+L  +M   G+     K + V      ++C+    + 
Sbjct: 513 KNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGN-----KLDRVCLAECLSSCASLASLE 567

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE-FDKAGAWSSLL 686
           EGM L + +    G++         +D+ G+ GK+    +++ M+P +       W++L+
Sbjct: 568 EGMQL-HGLGMKSGLDSDSYVVNAAMDMYGKCGKMN---EMLQMVPDQAIRPQQCWNTLI 623

Query: 687 GACRIHQNVEIGEIAAQNLFLL--EPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
                +   +  E   + +  +  +PD  +   LLS   S A L DK +D    M
Sbjct: 624 SGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSAC-SHAGLVDKGIDYYNSM 677



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 239/487 (49%), Gaps = 33/487 (6%)

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           ++   +W + ++   R G+   A E  R M    V  S F L S+  AC    R +G+  
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 202 GRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G  +H  + R G   N +I  AL+ +Y   G V DA+ LF    +R++VSW  ++ +LS 
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILI 316
           N    E +   RQM   G+  +  + A+V+  C  LE    G ++ ++     L+N + +
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            NS     L+ M+ N   V+   ++FD + +      NAMI+ Y       +  ++F  M
Sbjct: 183 ANS-----LITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
               GL P+ATT+ S++  C  ++ F    GIH   ++  L     V NAL++MYS  G+
Sbjct: 238 RH-HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +  ++ +F +M  RD +SWNTMI+ Y       DAL  L ++ +  E             
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE------------- 343

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN +T  + L  C +  AL  GK +HA  ++  L  +++VG++L+ MY KC  + 
Sbjct: 344 ----IPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSME 399

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A +VF  MP  +V+++NV+I  Y +  +G + +++   + + G     +KPN +T I +
Sbjct: 400 DAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAG-----IKPNYITMINI 454

Query: 617 FAACSHS 623
             + + S
Sbjct: 455 HGSFTSS 461



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 232/485 (47%), Gaps = 34/485 (7%)

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL---EMLDT 301
           DR   +W T VS   +  + + A   LR M  RG+   G ++AS++ AC      E +  
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G  IHA   R   L+ N ++G+AL+ +Y +   V   RR+F  + ++ +  W A++    
Sbjct: 63  GAAIHALTHRAG-LMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALS 121

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
            N Y EE L  + +M    G+  NA   ++VV  C   E       +  H I  GL    
Sbjct: 122 SNGYLEETLRAYRQMRR-EGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V N+L+ M+  +GR++ ++ +FD ME  DT+S N MI+ Y+  G      ++  +M++ 
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRH- 239

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
                    + L       +P++ TL +++  C +    + G  IH+  +R+ L + V V
Sbjct: 240 ---------HGL-------RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTV 283

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            +ALV+MY+  G L+ A  +F  M  R++I+WN +I +Y  +    + L+ L  +     
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLF---- 339

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
              E+ PN +TF +   ACS  G + +G  + + +     ++ +      ++ + G+   
Sbjct: 340 HTNEI-PNHLTFSSALGACSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNS 397

Query: 662 VEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL-FLLEPDVASHYVLLS 720
           +EDA ++   MP       +++ L+G   +   +E G  A Q   ++    +  +Y+ + 
Sbjct: 398 MEDAEKVFQSMPTH--DVVSYNVLIGGYAV---LEDGTKAMQVFSWIRSAGIKPNYITMI 452

Query: 721 NIYSS 725
           NI+ S
Sbjct: 453 NIHGS 457



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 28/230 (12%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-I 505
           M  R   +W T ++G   CG+   A  LLR M+                   R  P S  
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRE------------------RGVPLSGF 42

Query: 506 TLMTVLPGC---GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            L +++  C   G    +A G  IHA   R  L  +V +G+AL+ +Y   G ++ ARR+F
Sbjct: 43  ALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLF 102

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
             MP RNV++W  +++A   +G  +E L   + M  EG     V  N   F  + + C  
Sbjct: 103 WEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREG-----VPCNANAFATVVSLCGS 157

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
                 G+ +   +    G++        ++ + G  G+V+DA +L + M
Sbjct: 158 LENEVPGLQVASHVIVS-GLQNQVSVANSLITMFGNLGRVQDAEKLFDRM 206


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/616 (39%), Positives = 350/616 (56%), Gaps = 38/616 (6%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC---NCREVECGRRVFDFI 345
           +L  CS+   L   K IHA+ LR  +  D  F  S L+  +C       +    RV   I
Sbjct: 23  LLECCSNARDL---KIIHAHMLRTHLFFD-VFAASRLI-AFCIDSTTNLLHYAIRVASQI 77

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
            +  + ++NA+I G   +E  E +   +IK     GL P+  T   +V AC + E  P  
Sbjct: 78  QNPNLFIYNALIRGCSTSENPENSFHYYIKALRF-GLLPDNITHPFLVKACAQLENAPMG 136

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
              HG AIK G  +D YVQN+L+ MY+ +G I  ++++F  M   D VSW  MI GY  C
Sbjct: 137 MQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRC 196

Query: 466 GQHGDALMLLREMQNMEEEKN------------RNNVYDLDETVLRP------KPNSITL 507
           G    A    RE+ +   E+N            RNN ++                N   +
Sbjct: 197 GDAKSA----RELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVM 252

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + V+  C  L ALA G++ H Y +RN L+ ++++G+A+VDMYA+CG +  A  VF+ +P 
Sbjct: 253 VGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPE 312

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++V+ W  +I    MHG  ++ L     M  +G       P ++TF A+  ACSH+GMV 
Sbjct: 313 KDVLCWTALIAGLAMHGYAEKALWYFSEMAKKG-----FVPRDITFTAVLTACSHAGMVE 367

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
            G+++F  MK D+G+EP  +HY C+VDLLGRAGK+  A + +  MP +   A  W +LLG
Sbjct: 368 RGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVK-PNAPIWRALLG 426

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           ACRIH+NVE+GE   + L  ++P+ + HYVLLSNIY+ A  W     +R+ MK+ GVRK 
Sbjct: 427 ACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKP 486

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS-ERMRKEGYVPDTSCVLHNVNEEE 806
           PG S IE   ++H+F  GD +H + E++    E++   +++  GYV +T+  + +++EEE
Sbjct: 487 PGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEE 546

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           KE  L  HSEKLAIA+GI+     T IR+ KNLRVC DCH ATK ISK+   E+I+RD  
Sbjct: 547 KEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRN 606

Query: 867 RFHHFKNGTCSCGDYW 882
           RFHHFK GTCSC DYW
Sbjct: 607 RFHHFKEGTCSCMDYW 622



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 39/286 (13%)

Query: 51  SEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
           SE   N F      YI+  R  + PDN   P ++KA A +++  +G Q H   +K+G+  
Sbjct: 95  SENPENSFH----YYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFE- 149

Query: 111 SSVTVANTLVNMYGKCG------------------------------SDMWDVYKVFDRI 140
               V N+LV+MY   G                               D     ++FDR+
Sbjct: 150 QDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRM 209

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
            E++ V+W++MI+   R   ++ A+E F  +    V  +   +V V  +C++L     L 
Sbjct: 210 PERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLG---ALA 266

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +G + H   +R     N  +  A++ MYA+ G V+ A  +F+   ++D++ W  +++ L+
Sbjct: 267 MGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLA 326

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            +    +A+ +  +MA +G  P  ++  +VL ACSH  M++ G EI
Sbjct: 327 MHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEI 372



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 185/417 (44%), Gaps = 54/417 (12%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+  +  +DL   K IHAH+++          +  +        + +    +V  +I  
Sbjct: 23  LLECCSNARDL---KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQN 79

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
            +   +N++I         + +   +   L   + P + T   +  AC+ L   +   +G
Sbjct: 80  PNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQL---ENAPMG 136

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLG----------------------------RV 233
            Q HG +++ G E + ++ N+L+ MYA +G                            R 
Sbjct: 137 MQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRC 196

Query: 234 DDAKT---LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
            DAK+   LF    +R+LV+W+T++S  ++N+ F +AV     +   G+  +   +  V+
Sbjct: 197 GDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVI 256

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +C+HL  L  G++ H Y +RN + + N  +G+A+VDMY  C  VE    VF+ + +K +
Sbjct: 257 SSCAHLGALAMGEKAHEYVMRNKLSL-NLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFP 403
             W A+I G   + Y E+AL  F +M +  G  P   T ++V+ AC  +       E F 
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAK-KGFVPRDITFTAVLTACSHAGMVERGLEIFE 374

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
             +  HG   +L    + Y    ++D+  R G++  ++     M V+     W  ++
Sbjct: 375 SMKRDHGVEPRL----EHY--GCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/473 (21%), Positives = 189/473 (39%), Gaps = 71/473 (15%)

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
             ++ +L  +N ++   S ++    +  +  +    G+ PD ++   ++ AC+ LE    
Sbjct: 76  QIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPM 135

Query: 302 GKEIHAYALRN----DILIDNSFVG--------------------------SALVDMYCN 331
           G + H  A+++    D  + NS V                           + ++  Y  
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C + +  R +FD + ++ +  W+ MI+GY +N   E+A+  F  + +  G+  N T M  
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEAL-QAEGVVANETVMVG 254

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ +C    A    E  H + ++  L  +  +  A++DMY+R G +E +  +F+ +  +D
Sbjct: 255 VISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKD 314

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            + W  +I G  + G    AL    EM        +  V           P  IT   VL
Sbjct: 315 VLCWTALIAGLAMHGYAEKALWYFSEMA------KKGFV-----------PRDITFTAVL 357

Query: 512 PGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-N 569
             C     + +G EI     R+  +   +     +VD+  + G L  A +    MPV+ N
Sbjct: 358 TACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPN 417

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG----EVKPNEVTFIALFAACSHSGM 625
              W  ++ A  +H          KN V  G R G    E++P       L +       
Sbjct: 418 APIWRALLGACRIH----------KN-VEVGERVGKILLEMQPEYSGHYVLLSNIYARAN 466

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
             + + +  +M  D G+   P +    +D     GKV + + + +   PE +K
Sbjct: 467 KWKDVTVMRQMMKDKGVRKPPGYSLIEID-----GKVHE-FTIGDKTHPEIEK 513


>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/586 (38%), Positives = 340/586 (58%), Gaps = 32/586 (5%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIALWNAMITG 359
           +++HA+ L   + + +     + +  +C       +   R VF  I    I  WN++I G
Sbjct: 5   RQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKG 64

Query: 360 YGQ-NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           Y Q +   +E + LF K+ E     PN+ T++ V+ AC    AF +   +H H +K G G
Sbjct: 65  YSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFG 124

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
              +VQ +L++ Y +   I  ++ +F++M VR+ V+W  MI+G+   G   +A+ L REM
Sbjct: 125 SSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREM 184

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q    +                 P+++TL++V+  C    AL  G  +HAY  +  + TD
Sbjct: 185 QKAGIQ-----------------PDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTD 227

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + + +ALVDMYAKCGC+  A++VF  MPV++   W+ +IM +  HG  Q+ ++  + M+ 
Sbjct: 228 LELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLE 287

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
                 EV P+ VTF+A+ +AC+H G+VS G   F+ +  ++GIEPS +HY C VDLL R
Sbjct: 288 T-----EVTPDHVTFLAVLSACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGCKVDLLCR 341

Query: 659 AGKVEDAYQLINMM--PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           +G VE+AY++   M  PP    A  W SLL  C+  + + +GEI A+ L  LEP  A +Y
Sbjct: 342 SGLVEEAYRITTTMKIPP---NAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENY 398

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           +++SN+YSS   W+K  ++RK MKE  ++  PGCS IE    +H+F+ GD SH + + L 
Sbjct: 399 IMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLR 458

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
            F+E +S R+R  GY P  S VLH V +EEKE  L  HSE+ AIA+G+L T     IRV 
Sbjct: 459 EFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVV 518

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH+  K ISK+  REII+RD  RFH F  GTCSC D+W
Sbjct: 519 KNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 9/304 (2%)

Query: 59  REAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           +E I  + ++T +    P++F    VLKA A +     G Q+H+HV+K G+G SS+ V  
Sbjct: 73  KEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFG-SSLFVQT 131

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           +LVN YGKC  ++    KVF+ +  ++ V+W +MI+   R G  D A+E FR M  + ++
Sbjct: 132 SLVNFYGKC-EEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQ 190

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDA 236
           P + TLVSV  AC+     D   +G  +H    +        +  AL+ MYAK G ++ A
Sbjct: 191 PDAMTLVSVVSACAVAGALD---IGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERA 247

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           K +F     +D  +W++++   + +    +A+   +QM    + PD V+  +VL AC+H 
Sbjct: 248 KQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHG 307

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIALWNA 355
            ++  G+   +  L   I       G   VD+ C    VE   R+   +      A W +
Sbjct: 308 GLVSRGRRFWSLMLEFGIEPSVEHYGCK-VDLLCRSGLVEEAYRITTTMKIPPNAATWRS 366

Query: 356 MITG 359
           ++ G
Sbjct: 367 LLMG 370



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 23/377 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG----SDMWDVYKVFDRITEKDQVSWNSMI 152
           +Q+HAH++     LSS   A  L  +   C      ++     VF +I   +  SWNS+I
Sbjct: 5   RQLHAHILTRPLPLSSFAFA--LSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLI 62

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVE------PSSFTLVSVALACSNLSRRDGLRLGRQVH 206
               +       L    + L+  +       P+SFTL  V  AC+ ++       G QVH
Sbjct: 63  KGYSQIH----TLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVT---AFGEGLQVH 115

Query: 207 GNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            + L+ G  ++ F+  +L+  Y K   +  A+ +F+    R+LV+W  ++S  ++     
Sbjct: 116 SHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVD 175

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+   R+M   GI+PD +++ SV+ AC+    LD G  +HAY  +  +L D   + +AL
Sbjct: 176 EAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLE-LSTAL 234

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
           VDMY  C  +E  ++VF  +  K    W++MI G+  +   ++A+  F +M E   + P+
Sbjct: 235 VDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETE-VTPD 293

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T  +V+ AC                ++ G+          +D+  R G +E +  I  
Sbjct: 294 HVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITT 353

Query: 446 DMEV-RDTVSWNTMITG 461
            M++  +  +W +++ G
Sbjct: 354 TMKIPPNAATWRSLLMG 370



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   AR     EA+  + EM ++ IQPD     +V+ A A    L +G  +HA++
Sbjct: 160 AWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYI 219

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            KY + L+ + ++  LV+MY KCG  +    +VF  +  KD  +W+SMI      G    
Sbjct: 220 EKY-FVLTDLELSTALVDMYAKCGC-IERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQD 277

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A++AF+ ML + V P   T ++V  AC++
Sbjct: 278 AIDAFQQMLETEVTPDHVTFLAVLSACAH 306


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/628 (39%), Positives = 356/628 (56%), Gaps = 57/628 (9%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCR--EVECGRRVFDFISDKKIALWNAMITGY 360
           K++HA ALR     D+ +V   LV  Y N     +    +VF+++ +  + ++N +I G 
Sbjct: 47  KQVHAVALRTGHFQDH-YVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGC 105

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            QN    +A+  + KM  +A   PN  T  ++  AC  +EA  +   +H H IK GL  D
Sbjct: 106 LQNNEPCKAICCYYKMM-IAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGD 164

Query: 421 RYVQ-------------------------------NALMDMYSRMGRIEISKTIFDDMEV 449
            +++                               NA++D Y + G +E +K +F  ME 
Sbjct: 165 VHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMED 224

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEE---------------EKNRNNVYDLD 494
           ++  SWN M++G   CG   +A  L  EM+   E                K    V+++ 
Sbjct: 225 KNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVM 284

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
           +     +P    L +VL  C  L AL +G+ IHAY   N  + D V+G+ALVDMYAKCG 
Sbjct: 285 QRE-EIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGR 343

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L+ A  VF+ M  + V TWN +I   GMHG  ++ +EL   M  +     + +PN +T +
Sbjct: 344 LDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQ-----KFRPNGITLL 398

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +AC+HSGMV EG+ +F  M++ YGIEP  +HY CVVDLLGRAG + +A +++  MP 
Sbjct: 399 GVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPM 458

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E   A  W +LLGACR H +VE+GE   + L  LEP  +  Y LLSNIY+ A  WD   +
Sbjct: 459 E-PSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVAN 517

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK MKE GV+   G S I+F   +H+F  GDGSH Q + ++  L+N+ +R++ EG+ P+
Sbjct: 518 VRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPN 577

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           TS VL ++ EEEKE  L  HSEKLAIAFG++NT PGTTI V KNLR+C DCH A K IS+
Sbjct: 578 TSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQ 637

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  REII+RD  R+HHFK GTCSC D+W
Sbjct: 638 VYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 202/454 (44%), Gaps = 70/454 (15%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++N+  +AI  Y +M  +  +P+ F +P + KA    +    G Q+HAHV+K G     V
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLS-GDV 165

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
            + +  + MYG  G ++    ++       D + +N+MI    + G+ + A E F  M  
Sbjct: 166 HIRSAGIQMYGSFG-EVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMED 224

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRV 233
            NV                                    G WN  +     +  AK G +
Sbjct: 225 KNV------------------------------------GSWNVMV-----SGMAKCGMI 243

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           ++A+ LF   ++++ +SW+ ++    +   + EA+     M    I+P    ++SVL AC
Sbjct: 244 EEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAAC 303

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           ++L  LD G+ IHAY   N    D + +G+ALVDMY  C  ++    VF+ +  K++  W
Sbjct: 304 ANLGALDQGRWIHAYVNNNSNSFD-AVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTW 362

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKE 406
           NAMI G G +   E+A+ LF KM++     PN  T+  V+ AC  S         F   E
Sbjct: 363 NAMICGLGMHGRAEDAIELFFKMQK-QKFRPNGITLLGVLSACAHSGMVDEGLRIFNSME 421

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTIC 465
            ++G    +  G + Y    ++D+  R G +  ++ +   M +  + + W  ++     C
Sbjct: 422 EVYG----IEPGMEHY--GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGA---C 472

Query: 466 GQHGDA--------LMLLREMQNMEEEKNRNNVY 491
            +HGD         ++L  E QN       +N+Y
Sbjct: 473 RKHGDVELGERVGKILLELEPQNSGRYALLSNIY 506



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   ++EA+  +  M R +I+P  F   +VL A A +  L  G+ IHA+V
Sbjct: 260 SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYV 319

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DM-WDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
                   +V +   LV+MY KCG  DM WD   VF+++ +K+  +WN+MI  L   G+ 
Sbjct: 320 NNNSNSFDAV-LGTALVDMYAKCGRLDMAWD---VFEKMEKKEVFTWNAMICGLGMHGRA 375

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRL 201
           + A+E F  M      P+  TL+ V  AC++    D GLR+
Sbjct: 376 EDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRI 416


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/550 (41%), Positives = 330/550 (60%), Gaps = 29/550 (5%)

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            RR FD I D    +  AM +GY +N     +L LF  M  +A    +    ++ + A  
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAM--IASDSASVVDEAAALVAFS 60

Query: 398 RSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDT 452
            S   PD+     +H    K+G  R+  V N ++D Y++ G   +E+++ +FD ME RD 
Sbjct: 61  ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDV 119

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VSWN+MI  Y   G   +A+ L  +M N+                   K N++ L  VL 
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGG---------------IKCNAVALSAVLL 164

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
            C    A+  GK IH   +R  L  +V VG+++VDMY+KCG +  A R F  +  +N+++
Sbjct: 165 ACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILS 224

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W+ +I  YGMHG GQE LE+   M   G     ++PN +TFI++ AACSH+G++ EG   
Sbjct: 225 WSAMITGYGMHGRGQEALEIFTEMKRSG-----LRPNYITFISVLAACSHAGLLDEGRYW 279

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +  MK ++GIE   +HY C+VDLLGRAG +++AY LI  M  + D A  W +LL ACRIH
Sbjct: 280 YNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPD-AAIWGALLSACRIH 338

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
           +NVE+ E++ + LF L+   + +YVLLSNIY+ A +W     +R  +K   + K PG S 
Sbjct: 339 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSS 398

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
            E   +I+ F  GD SH Q  +++ +LE L ERM++ GYVP+T  VLH+++EEEKE+ L 
Sbjct: 399 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 458

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AF ++N+ P + I + KNLRVC+DCH A KFI+KI  REII+RD++RFHHFK
Sbjct: 459 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 518

Query: 873 NGTCSCGDYW 882
           +G CSC DYW
Sbjct: 519 DGLCSCRDYW 528



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 182/342 (53%), Gaps = 15/342 (4%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  + FD I + + V   +M +   R      +LE FR M+ S+   S     +  +A S
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASD-SASVVDEAAALVAFS 60

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD--DAKTLFKSFEDRDL 248
             +R     +   +H    ++G E N  ++N ++  YAK G  D   A+ +F + E RD+
Sbjct: 61  ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDV 119

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           VSWN++++  +QN    EA+    +M     GIK + V++++VL AC+H   + TGK IH
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
              +R   L +N +VG+++VDMY  C  VE   R F  I +K I  W+AMITGYG +   
Sbjct: 180 NQVVRMG-LEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRG 238

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH-AIKLGLGRDRYVQN 425
           +EAL +F +M+  +GL PN  T  SV+ AC  S A    EG + + A+K   G +  V++
Sbjct: 239 QEALEIFTEMKR-SGLRPNYITFISVLAAC--SHAGLLDEGRYWYNAMKQEFGIEAGVEH 295

Query: 426 --ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
              ++D+  R G ++ + ++  +M+V+ D   W  +++   I
Sbjct: 296 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRI 337



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 138/256 (53%), Gaps = 11/256 (4%)

Query: 54  RSNQFREAILSYIEMTRSDIQP--DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           R+N    ++  +  M  SD     D  A      A A + D  +   +HA + K G+  +
Sbjct: 27  RNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 86

Query: 112 SVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           +  V NT+++ Y K GS D+    KVFD + E+D VSWNSMIA   + G    A+  +  
Sbjct: 87  A-GVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSK 144

Query: 171 MLY--SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
           ML     ++ ++  L +V LAC++      ++ G+ +H   +R+G E N ++  +++ MY
Sbjct: 145 MLNVGGGIKCNAVALSAVLLACAHAG---AIQTGKHIHNQVVRMGLEENVYVGTSIVDMY 201

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           +K GRV+ A   F+  ++++++SW+ +++    + +  EA+    +M   G++P+ ++  
Sbjct: 202 SKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFI 261

Query: 288 SVLPACSHLEMLDTGK 303
           SVL ACSH  +LD G+
Sbjct: 262 SVLAACSHAGLLDEGR 277


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/508 (42%), Positives = 316/508 (62%), Gaps = 24/508 (4%)

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M ++  L P+  TM S+VPAC +       + +H ++ +LGL  +  V NA++DMY +  
Sbjct: 1   MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD 60

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            IE ++ +F+ +  +D +SW +M++G    G   ++L L R+MQ                
Sbjct: 61  DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQ---------------- 104

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
            + + +P+ ITL+ VL  C    AL +GK IH    +  +  D+V+ +ALVDMYAKCG +
Sbjct: 105 -LHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSI 163

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
           + A +VF  M VRNV TWN +I    MHG G++ + L   M  +     ++ P++VTFIA
Sbjct: 164 DLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXD-----KLMPDDVTFIA 218

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           L  ACSH+G+V EG+ +F  MK+ + IEP  +HY CVVDLL RA KV+DA   I  MP +
Sbjct: 219 LLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIK 278

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            +    W++LLGACR   + ++ E   + +  LEPD    YV+LSN+Y+    WD A+ +
Sbjct: 279 ANSV-LWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKL 337

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG-YVPD 794
           RK+MK  G+ K PGCSWIE    IH+F+AGD SH Q+EQ++  +E ++ R+  +G +VP 
Sbjct: 338 RKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPG 397

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T+ VL ++ EEEKE  L  HSEKLAIA G+++TP G+ IR+ KNLRVCNDCH   K  SK
Sbjct: 398 TANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSK 457

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +REI+ RD  RFHHFK G+CSC D+W
Sbjct: 458 VYNREIVARDRSRFHHFKEGSCSCMDFW 485



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 162/306 (52%), Gaps = 13/306 (4%)

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           M    N+ P   T+VS+  AC+ L     L  G+ +H  S  +G + N  + NA++ MY 
Sbjct: 1   MTKLDNLRPDEVTMVSLVPACAQLG---NLERGKLLHSYSKELGLDENLSVNNAILDMYC 57

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K   ++ A+ +F    ++D++SW +++S L+++  F E++   R+M L  I+PD +++  
Sbjct: 58  KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVG 117

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           VL AC+    LD GK IH    + +I  D   + +ALVDMY  C  ++   +VF  +  +
Sbjct: 118 VLSACAQTGALDQGKYIHLLIDKFEINCD-LVLETALVDMYAKCGSIDLALQVFRRMRVR 176

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WNAMI G   + + E+A+ LF +M E   L P+  T  +++ AC  S A    EG+
Sbjct: 177 NVFTWNAMIGGLAMHGHGEDAISLFDQM-EXDKLMPDDVTFIALLCAC--SHAGLVDEGL 233

Query: 409 H-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
               A+K     +  +++   ++D+  R  +++ +    ++M ++ ++V W T++ G   
Sbjct: 234 AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACR 292

Query: 465 CGQHGD 470
            G H D
Sbjct: 293 SGGHFD 298



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 146/275 (53%), Gaps = 15/275 (5%)

Query: 68  MTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           MT+ D ++PD     +++ A A + +L  GK +H++  + G    +++V N +++MY KC
Sbjct: 1   MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLD-ENLSVNNAILDMYCKC 59

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
             D+    +VF+RI EKD +SW SM++ L + G +  +L  FR M    +EP   TLV V
Sbjct: 60  -DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGV 118

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEW----NTFIMNALMAMYAKLGRVDDAKTLFKS 242
             AC+     D    G+ +H   L + ++    +  +  AL+ MYAK G +D A  +F+ 
Sbjct: 119 LSACAQTGALDQ---GKYIH---LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRR 172

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
              R++ +WN ++  L+ +    +A+    QM    + PD V+  ++L ACSH  ++D G
Sbjct: 173 MRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG 232

Query: 303 KEIHAYALRNDILIDNSFVG-SALVDMYCNCREVE 336
             +   A++N   I+        +VD+ C  R+V+
Sbjct: 233 LAMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVD 266



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L   A+S  F+E++  + +M    I+PD      VL A A    L  GK IH  +
Sbjct: 79  SWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLI 138

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            K+      + +   LV+MY KCGS D+    +VF R+  ++  +WN+MI  L   G  +
Sbjct: 139 DKFEIN-CDLVLETALVDMYAKCGSIDL--ALQVFRRMRVRNVFTWNAMIGGLAMHGHGE 195

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A+  F  M    + P   T +++  ACS+    D      Q   N  ++ E        
Sbjct: 196 DAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQI-EPRMEHYGC 254

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKF 264
           ++ +  +  +VDDA    ++   + + V W T++ +      F
Sbjct: 255 VVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHF 297


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/632 (37%), Positives = 357/632 (56%), Gaps = 39/632 (6%)

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           + LR++ L+  K       S L +C+ L  L   K IHA+ +R   + D  F  S L+ +
Sbjct: 7   LVLRKLELKNPK------LSFLESCTTLSHL---KIIHAHLIRAHTIFD-VFAASCLISI 56

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
             N   ++   +VF  I +  + ++N+ I G+  ++  +++   +++ +   GL P+  T
Sbjct: 57  SINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKR-NGLVPDNLT 115

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
              +V AC +  +       HG  I+ G   D YVQN+L+ MYS +G I+ +  +F  + 
Sbjct: 116 YPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRIS 175

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN------------RNNVYD--LD 494
             D VSW +M+ GY   G    A  L  +M     EKN            +N+ +D  ++
Sbjct: 176 CLDVVSWTSMVAGYIKSGDVTSARKLFDKMP----EKNLVTWSVMISGYAKNSFFDKAIE 231

Query: 495 ETVLRPK----PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
              L        N   +++V+  C  L AL  G+  H Y +RN +  ++++G+ALVDMYA
Sbjct: 232 LYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYA 291

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           +CG ++ A  VFD +P R+ ++W  +I  + MHG  ++ LE    M   G     + P E
Sbjct: 292 RCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAG-----LTPRE 346

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           +TF A+ +ACSH G+V  G++LF  MK DY IEP  +HY C+VDLLGRAGK+ +A + +N
Sbjct: 347 ITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVN 406

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP +   A  W +LLGACRIH+N EI E A + L  L+P+ + +YVLLSNIY+    W+
Sbjct: 407 EMPMK-PNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWE 465

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
              ++R+ MKE GV K PG +  E   ++HKF  GD +H + +Q+    E +  ++R  G
Sbjct: 466 NVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAG 525

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y  +    L +++EEEKE+ +  HSEKLAIA+ I+ T     IR+ KNLRVC DCH ATK
Sbjct: 526 YTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATK 585

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ISK+  RE+I+RD  RFHHFK G CSC DYW
Sbjct: 586 LISKVYERELIVRDRNRFHHFKGGACSCMDYW 617



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 201/445 (45%), Gaps = 68/445 (15%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD-VYKVFDRITEKDQVSWNSM 151
           LS  K IHAH+++  + +  V  A+ L+++      ++ D   +VF +I   +   +NS 
Sbjct: 28  LSHLKIIHAHLIR-AHTIFDVFAASCLISI--SINKNLLDYAAQVFYQIQNPNLFIYNSF 84

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I         D +   +     + + P + T   +  AC+   ++  L +G Q HG  +R
Sbjct: 85  IRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACT---QKGSLDMGIQAHGQIIR 141

Query: 212 VG-EWNTFIMNALMAMYAKLGR-------------------------------VDDAKTL 239
            G + + ++ N+L+ MY+ LG                                V  A+ L
Sbjct: 142 HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKL 201

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F    +++LV+W+ ++S  ++N  F +A+     +   G+  +   + SV+ +C+HL  L
Sbjct: 202 FDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGAL 261

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G+  H Y LRN + + N  +G+ALVDMY  C  ++    VFD +  +    W  +I G
Sbjct: 262 ELGERAHDYILRNKMTV-NLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAG 320

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL-- 417
           +  + Y E+AL  F +ME+ AGL P   T ++V+ AC            HG  ++ GL  
Sbjct: 321 FAMHGYAEKALEYFSRMEK-AGLTPREITFTAVLSACS-----------HGGLVERGLEL 368

Query: 418 ----GRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICG 466
                RD  ++        ++D+  R G++  ++   ++M ++     W  ++     C 
Sbjct: 369 FESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGA---CR 425

Query: 467 QHGDALMLLREMQNMEEEKNRNNVY 491
            H ++ +  R  + + E K  ++ Y
Sbjct: 426 IHKNSEIAERAGKTLIELKPEHSGY 450



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 35/272 (12%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y++  R+ + PDN  +P ++KA      L +G Q H  ++++G+  S V V N+LV MY 
Sbjct: 101 YVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD-SDVYVQNSLVTMYS 159

Query: 125 KCG------------------------------SDMWDVYKVFDRITEKDQVSWNSMIAT 154
             G                               D+    K+FD++ EK+ V+W+ MI+ 
Sbjct: 160 TLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISG 219

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
             +   +D A+E + ++    V  +   +VSV  +C++L     L LG + H   LR   
Sbjct: 220 YAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLG---ALELGERAHDYILRNKM 276

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             N  +  AL+ MYA+ G +D A  +F     RD +SW T+++  + +    +A+ +  +
Sbjct: 277 TVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSR 336

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           M   G+ P  ++  +VL ACSH  +++ G E+
Sbjct: 337 MEKAGLTPREITFTAVLSACSHGGLVERGLEL 368


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 292/849 (34%), Positives = 441/849 (51%), Gaps = 59/849 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A+    RE +  + +M     +PD F F  VL A +    L+ GK IH   
Sbjct: 94  SWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCA 153

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G  + +  V N +VN+YGKCG  + +   VF+R+ E++ VSWN++IA   + G    
Sbjct: 154 VLAG--METQVVGNAIVNLYGKCGR-VHEAKAVFERLPERNLVSWNALIAANAQNGHCKD 210

Query: 164 ALEAFRMM-LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           A++ F +M L  +V P+  T VSV  ACSNL     L  G+  H   +R G +   F+ N
Sbjct: 211 AMQVFHLMDLDGSVRPNDATFVSVVDACSNLL---DLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY K G VD A+ +F+    R++VSW  ++ + +Q      A    ++M     +P
Sbjct: 268 SLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEP 324

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           + V+  +V+ +C   E L   ++IHA+ + +    D + +   LV MY  C  V+    +
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSD-AVLQVCLVTMYGKCGSVDSAWSI 383

Query: 342 FDFISDK--KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           F+ + ++      WNAMI+G  Q+   ++AL  F KME + G+ PN+ T  + + AC   
Sbjct: 384 FENLKERSNNAVTWNAMISGLAQHGESKQALECFWKME-LEGVRPNSVTYLASLEACSSL 442

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                   +H   I L    +  + NA+++MY + G ++ +   F  M  RD VSWNTMI
Sbjct: 443 NDLTRGRQLHAR-ILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMI 501

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
             Y    QHG     L   + M+ E      +  D           T +  +  CG++ +
Sbjct: 502 ATY---AQHGSGRQALEFFKQMDLEG-----WTTDRA---------TYLGAIDACGSVPS 544

Query: 520 LAKGKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           LA GK IH+        L  D  V +ALV MYA+CG L+ A+ VF     RN++TW+ +I
Sbjct: 545 LALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLI 604

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            A   HG   E L+L + M  +G+     KP+ +TF  L AACS  G+V +G+  F  M 
Sbjct: 605 AACAQHGRENEALDLFREMQLQGT-----KPDALTFSTLVAACSRRGVVKDGVFYFVSMV 659

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           +DY I  S DH+  +VDLLGRAG +E+A Q++   P     A A + LLGAC +H +VE 
Sbjct: 660 EDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPC----ALAHAVLLGACHVHGDVER 715

Query: 698 GEIAAQNLFLLE----PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC-SW 752
           G   AQ+   L+       A+   +L+ +Y +A  W+ A  VRK ++    R+EPG  SW
Sbjct: 716 GIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSW 775

Query: 753 IEFGDEIHKFLAGDGSHQ--QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           IE  + +H+F   D   Q  + +++ G L+ LS    +EG +    C   N        L
Sbjct: 776 IEVKNRVHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGI----CKDENA---RAHIL 828

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
            C HSEK+AI FGI++TP G  IR+ KNLR C+DCH   KF+S+   REI +RD    H 
Sbjct: 829 GCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHC 888

Query: 871 FK-NGTCSC 878
           F+ NG+CSC
Sbjct: 889 FQTNGSCSC 897



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 184/634 (29%), Positives = 312/634 (49%), Gaps = 41/634 (6%)

Query: 63  LSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNM 122
           ++ ++ +   +QP  +A  ++L+     +  + GK +H H++  G G++   + N L+ M
Sbjct: 14  INQLKKSSESLQPARYA--SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRY-IQNHLIFM 70

Query: 123 YGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           Y KCG  + D  +VF+ +   +  SW ++I    + G     L  FR M     +P +F 
Sbjct: 71  YAKCGC-LEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFV 129

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
             +V  ACS+      L  G+ +H  ++  G     + NA++ +Y K GRV +AK +F+ 
Sbjct: 130 FSTVLTACSSAG---ALNEGKAIHDCAVLAGMETQVVGNAIVNLYGKCGRVHEAKAVFER 186

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDT 301
             +R+LVSWN ++++ +QN    +A+     M L G ++P+  +  SV+ ACS+L  L  
Sbjct: 187 LPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPR 246

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK  H   +R        FVG++LV+MY  C  V+  R VF+ +S + +  W  MI  Y 
Sbjct: 247 GKSTHERIIRTG-FDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYA 305

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           Q  +   A  L+ +M+      PNA T  +V+ +C+R E  P  E IH H +  G   D 
Sbjct: 306 QQGFIRAAFDLYKRMD----CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDA 361

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVR--DTVSWNTMITGYTICGQHGDALMLLREMQ 479
            +Q  L+ MY + G ++ + +IF++++ R  + V+WN MI+G     QHG++   L    
Sbjct: 362 VLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGL---AQHGESKQALECFW 418

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
            ME E  R              PNS+T +  L  C +L+ L +G+++HA  +   +  + 
Sbjct: 419 KMELEGVR--------------PNSVTYLASLEACSSLNDLTRGRQLHARILLENI-HEA 463

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            + +A+++MY KCG L+ A   F  MP R+V++WN +I  Y  HG G++ LE  K M  E
Sbjct: 464 NLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLE 523

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG-IEPSPDHYACVVDLLGR 658
           G        +  T++    AC     ++ G  +   +      +E  P     +V +  R
Sbjct: 524 G-----WTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYAR 578

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            G + DA  +             WS+L+ AC  H
Sbjct: 579 CGSLHDAKSVF--WRSHSRNLVTWSNLIAACAQH 610


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/764 (33%), Positives = 420/764 (54%), Gaps = 31/764 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L     +   R++I  ++ M    I  D   F  VLKA +GI+D  LG Q+H   
Sbjct: 105 SWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLA 164

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++ G+  + V   + LV+MY KC   +   +++F  + E++ V W+++IA   +  ++  
Sbjct: 165 IQMGFE-NDVVTGSALVDMYSKC-KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIE 222

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L+ F+ ML   +  S  T  SV  +C+ LS     +LG Q+HG++L+    +++ I  A
Sbjct: 223 GLKLFKDMLKVGMGVSQSTYASVFRSCAGLS---AFKLGTQLHGHALKSDFAYDSIIGTA 279

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK  R+ DA  +F +  +    S+N I+   ++ D+ L+A+   + +    +  D
Sbjct: 280 TLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFD 339

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +S++  L ACS ++    G ++H  A++  +   N  V + ++DMY  C  +     +F
Sbjct: 340 EISLSGALTACSVIKGHLEGIQLHGLAVKCGLGF-NICVANTILDMYGKCGALVEACTIF 398

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           D +  +    WNA+I  + QNE   + L LF+ M   + + P+  T  SVV AC   +A 
Sbjct: 399 DDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQAL 457

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IHG  +K G+G D +V +AL+DMY + G +  ++ I D +E + TVSWN++I+G+
Sbjct: 458 NYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGF 517

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
           +   Q  +A     +M              L+  V+   P++ T  TVL  C  ++ +  
Sbjct: 518 SSQKQSENAQRYFSQM--------------LEMGVI---PDNFTYATVLDVCANMATIEL 560

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           GK+IHA  ++  L +DV + S LVDMY+KCG +  +R +F+  P R+ +TW+ +I AY  
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAY 620

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G++ ++L + M     +   VKPN   FI++  AC+H G V +G+  F  M+  YG+
Sbjct: 621 HGHGEQAIKLFEEM-----QLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGL 675

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           +P  +HY+C+VDLLGR+ +V +A +LI  M  E D    W +LL  C++  NVE+ E A 
Sbjct: 676 DPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDV-IWRTLLSNCKMQGNVEVAEKAF 734

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
            +L  L+P  +S YVLL+N+Y++  +W +   +R  MK   ++KEPGCSWIE  DE+H F
Sbjct: 735 NSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTF 794

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           L GD +H +SE+++     L + M+  GYVPD   +L    EE+
Sbjct: 795 LVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDSMLDEEVEEQ 838



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 187/688 (27%), Positives = 329/688 (47%), Gaps = 75/688 (10%)

Query: 78  FAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF 137
           F F  +L+  + ++ L+ GKQ HA ++   + + ++ VAN LV  Y K  S+M   +KVF
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSF-VPTIYVANCLVQFYCK-SSNMNYAFKVF 64

Query: 138 DRIT-------------------------------EKDQVSWNSMIATLCRFGKWDLALE 166
           DR+                                E+D VSWNS+++     G    ++E
Sbjct: 65  DRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 167 AFRMMLYSNVEPSSFTLVSVAL-ACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALM 224
            F  M    + P  +   SV L ACS +   +   LG QVH  ++++G  N  +  +AL+
Sbjct: 125 IFVRMRSLKI-PHDYATFSVVLKACSGI---EDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            MY+K  ++D A  +F+   +R+LV W+ +++   QND+F+E +   + M   G+     
Sbjct: 181 DMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           + ASV  +C+ L     G ++H +AL++D   D S +G+A +DMY  C  +    +VF+ 
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD-SIIGTATLDMYAKCDRMSDAWKVFNT 299

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           + +     +NA+I GY + +   +AL +F  ++    L  +  ++S  + AC   +   +
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTY-LSFDEISLSGALTACSVIKGHLE 358

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              +HG A+K GLG +  V N ++DMY + G +  + TIFDDME RD VSWN +I  +  
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHE- 417

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
                         QN E  K  +    +  + +  +P+  T  +V+  C    AL  G 
Sbjct: 418 --------------QNEEIVKTLSLFVSMLRSTM--EPDDFTYGSVVKACAGQQALNYGM 461

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           EIH   +++ +  D  VGSALVDMY KCG L  A ++ D +  +  ++WN II  +    
Sbjct: 462 EIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQK 521

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
           + +        M+  G     V P+  T+  +   C++   +  G  +  ++     +  
Sbjct: 522 QSENAQRYFSQMLEMG-----VIPDNFTYATVLDVCANMATIELGKQIHAQI---LKLNL 573

Query: 645 SPDHY--ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE--IGEI 700
             D Y  + +VD+  + G ++D+ +L+    P+ D    WS+++ A   H + E  I   
Sbjct: 574 HSDVYIASTLVDMYSKCGNMQDS-RLMFEKTPKRDYV-TWSAMICAYAYHGHGEQAIKLF 631

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQL 728
               L  ++P+   H + +S + + A +
Sbjct: 632 EEMQLLNVKPN---HTIFISVLRACAHM 656



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 254/506 (50%), Gaps = 44/506 (8%)

Query: 31  SLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI 90
           +LP P  Q     S+   +   AR +Q  +A+  +  + R+ +  D  +    L A + I
Sbjct: 299 TLPNPPRQ-----SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVI 353

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           +    G Q+H   VK G G  ++ VANT+++MYGKCG+ + +   +FD +  +D VSWN+
Sbjct: 354 KGHLEGIQLHGLAVKCGLGF-NICVANTILDMYGKCGA-LVEACTIFDDMERRDAVSWNA 411

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +IA   +  +    L  F  ML S +EP  FT  SV  AC+    +  L  G ++HG  +
Sbjct: 412 IIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAG---QQALNYGMEIHGRIV 468

Query: 211 RVG---EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           + G   +W  F+ +AL+ MY K G + +A+ +    E++  VSWN+I+S  S   +   A
Sbjct: 469 KSGMGLDW--FVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENA 526

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
             +  QM   G+ PD  + A+VL  C+++  ++ GK+IHA  L+ ++  D  ++ S LVD
Sbjct: 527 QRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSD-VYIASTLVD 585

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++  R +F+    +    W+AMI  Y  + + E+A+ LF +M ++  + PN T
Sbjct: 586 MYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEM-QLLNVKPNHT 644

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQN--ALMDMYSRMGRIEISKTIF 444
              SV+ AC     + DK G+H   I +   G D ++++   ++D+  R  ++  +  + 
Sbjct: 645 IFISVLRACAHM-GYVDK-GLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLI 702

Query: 445 DDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNME-EEKNRNNVYDLDETVLRPKP 502
           + M    D V W T+++    C   G          N+E  EK  N++  LD     P+ 
Sbjct: 703 ESMHFEADDVIWRTLLSN---CKMQG----------NVEVAEKAFNSLLQLD-----PQD 744

Query: 503 NS--ITLMTVLPGCGALSALAKGKEI 526
           +S  + L  V    G    +AK + I
Sbjct: 745 SSAYVLLANVYANVGMWGEVAKIRSI 770


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/687 (34%), Positives = 368/687 (53%), Gaps = 70/687 (10%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           ++ E NT   N L++ Y K G + +A+ +F    +R++VSW ++V    Q     EA + 
Sbjct: 72  KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELL 131

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M  + +    VS   +L       +++ G+   A  L + I + +    + ++   C
Sbjct: 132 FWRMPEKNV----VSWTVMLGG-----LIEDGRVDEARRLFDMIPVKDVVASTNMIGGLC 182

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
           +   +   R +FD +  + +  W +MI+GY  N   + A  LF                 
Sbjct: 183 SEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF----------------- 225

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
                    E  PDK  +                 A++  Y+R GRI  +  +F  M V+
Sbjct: 226 ---------EVMPDKNEV--------------TWTAMLKGYTRSGRINEAAELFKAMPVK 262

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEE-------EKNRNNVYDLDETVLRP--- 500
              + N MI G+ + G+ G A  +  +M+  ++       +      ++L+   L     
Sbjct: 263 PVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQ 322

Query: 501 ----KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               +PN  +++++L  CG+L++L  G+++H+  +R+    D+ V S L+ MY KCG L 
Sbjct: 323 REGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLV 382

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
             +RVFD    ++++ WN II  Y  HG G++ LE+   M + G+      P+E+TFI +
Sbjct: 383 TGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGA-----APDEITFIGV 437

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
            +AC ++G V EG+++F  MK  Y ++   +HYAC+VDLLGRAGK+ +A  LI  MP E 
Sbjct: 438 LSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEA 497

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
           D A  W +LL ACR H+N+++ EIAA+ L  LEP  A  Y+LLSN+Y+S   W    ++R
Sbjct: 498 D-AIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELR 556

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAG-DGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           K M+   V K PGCSWIE  +++H F  G   SH + E +   LE L   +R+ GY PD 
Sbjct: 557 KTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDG 616

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
           S V+H+V+EE+K   L  HSEK+A+A+G+L  P G  IRV KNLRVC DCH A K I+++
Sbjct: 617 SFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQV 676

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
             REIILRD  RFHHFK+G CSC D+W
Sbjct: 677 TGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 201/487 (41%), Gaps = 74/487 (15%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           +  K+FD++ E++ +SWN +++   + G    A + F  M   NV   S+T +       
Sbjct: 65  EAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNV--VSWTSMVRGYVQE 122

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            L     L   R    N   V  W T ++  L+    + GRVD+A+ LF     +D+V+ 
Sbjct: 123 GLIDEAELLFWRMPEKN---VVSW-TVMLGGLI----EDGRVDEARRLFDMIPVKDVVAS 174

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             ++  L    +  EA     +M  R +    V+  S++   +    +D  +++      
Sbjct: 175 TNMIGGLCSEGRLSEAREIFDEMPQRNV----VAWTSMISGYAMNNKVDVARKLF----- 225

Query: 312 NDILID-NSFVGSALVDMY-----------------------CNCR--------EVECGR 339
            +++ D N    +A++  Y                       CN          EV   R
Sbjct: 226 -EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKAR 284

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD + +K    W+A+I  Y +  ++ EAL LF  M+   G+ PN  ++ S++  C   
Sbjct: 285 WVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQR-EGVRPNFPSIISILSVCGSL 343

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            +      +H   ++     D YV + L+ MY + G +   K +FD    +D V WN++I
Sbjct: 344 ASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSII 403

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY   G    AL +  EM +                     P+ IT + VL  CG    
Sbjct: 404 AGYAQHGFGEKALEVFHEMFSSG-----------------AAPDEITFIGVLSACGYTGK 446

Query: 520 LAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
           + +G EI   ++++    D      + +VD+  + G LN A  + + MPV  + I W  +
Sbjct: 447 VKEGLEIFE-SMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGAL 505

Query: 577 IMAYGMH 583
           + A   H
Sbjct: 506 LSACRTH 512



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 8/183 (4%)

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           G+ G   W    VFD++ EKD  +W+++I    R G    AL  F +M    V P+  ++
Sbjct: 278 GEVGKARW----VFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSI 333

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           +S+   C +L+  D    GRQVH   +R   + + ++ + L+ MY K G +   K +F  
Sbjct: 334 ISILSVCGSLASLDH---GRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDR 390

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           F  +D+V WN+I++  +Q+    +A+    +M   G  PD ++   VL AC +   +  G
Sbjct: 391 FSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEG 450

Query: 303 KEI 305
            EI
Sbjct: 451 LEI 453



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 6/216 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   ++   R     EA+  +  M R  ++P+  +  ++L     +  L  G+Q+H+ +
Sbjct: 297 TWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQL 356

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+  + L  + V++ L+ MY KCG D+    +VFDR + KD V WNS+IA   + G  + 
Sbjct: 357 VRSHFDLD-IYVSSVLITMYIKCG-DLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK 414

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           ALE F  M  S   P   T + V  AC    + ++GL +   +  +  +V +  T     
Sbjct: 415 ALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMK-SKYQVDQ-KTEHYAC 472

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           ++ +  + G++++A  L ++   + D + W  ++S+
Sbjct: 473 MVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/727 (35%), Positives = 392/727 (53%), Gaps = 65/727 (8%)

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
            A   ++ ML + +   ++T   +  ACS   RR      +QVH + L++G + + ++ N
Sbjct: 196 FAFTLYKSMLSNYLGADNYTYPLLIQACS--IRRSEWE-AKQVHNHVLKLGFDSDVYVRN 252

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            L+  ++    + DA  +F      D VSWN+I++   +     EA     QM  R I  
Sbjct: 253 TLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI-- 310

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
                            + +   I  + +R             LV   C         ++
Sbjct: 311 -----------------IASNSMIVLFGMR------------GLVVEAC---------KL 332

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + +K +  W+A+I  + QNE  EEA+  F+ M ++ G+  +     S + AC     
Sbjct: 333 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKI-GVMVDEVVAVSALSACANLLV 391

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IH  ++K+G      +QNAL+ MYS+ G I +++ +FD+  + D +SWN+MI+G
Sbjct: 392 VNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISG 451

Query: 462 YTICGQHGDALMLLREM--------QNMEEEKNRNNVYDLDETVLRP------KPNSITL 507
           Y  C    +A  +   M         +M     +N+++D    + +       KP+  TL
Sbjct: 452 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 511

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           ++V+  C  L+AL +GK +HAY  RN L  +V++G+ L+DMY KCGC+  A  VF  M  
Sbjct: 512 VSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 571

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           + + TWN +I+   M+G  +  L++  NM     +   V PNE+TF+ +  AC H G+V 
Sbjct: 572 KGISTWNALILGLAMNGLVESSLDMFSNM-----KKCHVTPNEITFMGVLGACRHMGLVD 626

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           EG   FY M  D+ I+P+  HY C+VDLLGRAGK+++A +L+N MP   D A  W +LLG
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA-TWGALLG 685

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           AC+ H + E+G    + L  L+PD    +VLLSNIY+S   WD  +++R  M +  V K 
Sbjct: 686 ACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKI 745

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
           PGCS IE    IH+FLAGD +H   + +   L  ++ +++ EGY PD + VL +V+EEEK
Sbjct: 746 PGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEK 805

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           E+ L  HSEKLAIAFG++N  P T IR+ KNLR+CNDCH A K ISK   R+I++RD  R
Sbjct: 806 ESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHR 865

Query: 868 FHHFKNG 874
           FHHF+ G
Sbjct: 866 FHHFEQG 872



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 216/438 (49%), Gaps = 60/438 (13%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D+ ++ ++L     I ++   K I+  + +      S+  +N+++ ++G  G  + +  K
Sbjct: 278 DSVSWNSILAGYIEIGNVEEAKHIYHQMPE-----RSIIASNSMIVLFGMRGLVV-EACK 331

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD + EKD V+W+++IA   +   ++ A+  F  M    V       VS   AC+NL  
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 391

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGR---------------------- 232
              + +G+ +H  SL++G E    + NAL+ MY+K G                       
Sbjct: 392 ---VNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 448

Query: 233 ---------VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                    VD+AK +F S  ++D+VSW++++S  +QND F E +   ++M + G KPD 
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDE 508

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ SV+ AC+ L  L+ GK +HAY  RN + I N  +G+ L+DMY  C  VE    VF 
Sbjct: 509 TTLVSVISACARLAALEQGKWVHAYIKRNGLTI-NVILGTTLIDMYMKCGCVETALEVFY 567

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + +K I+ WNA+I G   N   E +L +F  M++   + PN  T   V+ AC R     
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK-CHVTPNEITFMGVLGAC-RHMGLV 625

Query: 404 DKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
           D EG       IH H I+  +         ++D+  R G+++ ++ + + M +  D  +W
Sbjct: 626 D-EGQHHFYSMIHDHKIQPNVKH----YGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 680

Query: 456 NTMITGYTICGQHGDALM 473
             ++     C +HGD+ M
Sbjct: 681 GALLGA---CKKHGDSEM 695



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 36/301 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  + EAI +++ M +  +  D     + L A A +  +++GK IH+  
Sbjct: 343 TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLS 402

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDM----------------W--------------DV 133
           +K G   S + + N L+ MY KCG  M                W              + 
Sbjct: 403 LKIGTE-SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 461

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
             +FD + EKD VSW+SMI+   +   +D  L  F+ M  S  +P   TLVSV  AC+ L
Sbjct: 462 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 521

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +    L  G+ VH    R G   N  +   L+ MY K G V+ A  +F    ++ + +WN
Sbjct: 522 A---ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 578

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++  L+ N     ++     M    + P+ ++   VL AC H+ ++D G+  H Y++ +
Sbjct: 579 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH-HFYSMIH 637

Query: 313 D 313
           D
Sbjct: 638 D 638


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 268/785 (34%), Positives = 399/785 (50%), Gaps = 117/785 (14%)

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
           AN  +    + G  + +  K+FD    K   SWNSM+A                   ++N
Sbjct: 20  ANVRITHLSRIGK-IHEARKLFDSCDSKSISSWNSMVAGY-----------------FAN 61

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
           + P                 RD  +L  ++          N    N L++ Y K G +D+
Sbjct: 62  LMP-----------------RDARKLFDEMPDR-------NIISWNGLVSGYMKNGEIDE 97

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F    +R++VSW  +V     N K   A     +M     + + VS   +L     
Sbjct: 98  ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVML----- 148

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           +  L  G+   A  L   I   ++   ++++   C    V+  R +FD +S++ +  W  
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M+TGYGQN   ++A  +F                          +  P+K  +   ++ +
Sbjct: 209 MVTGYGQNNRVDDARKIF--------------------------DVMPEKTEVSWTSMLM 242

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G     YVQN         GRIE ++ +F+ M V+  ++ N MI+G    GQ G+     
Sbjct: 243 G-----YVQN---------GRIEDAEELFEVMPVKPVIACNAMISGL---GQKGEIAKAR 285

Query: 476 REMQNMEE-------------EKNRNNVYDLDETVLRPK----PNSITLMTVLPGCGALS 518
           R   +M+E             E+N   +  LD  +L  K    P   TL+++L  C +L+
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           +L  GK++HA  +R     DV V S L+ MY KCG L  ++ +FD  P +++I WN II 
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y  HG G+E L++   M   GS     KPNEVTF+A  +ACS++GMV EG+ ++  M+ 
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGS----TKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            +G++P   HYAC+VD+LGRAG+  +A ++I+ M  E D A  W SLLGACR H  +++ 
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD-AAVWGSLLGACRTHSQLDVA 520

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E  A+ L  +EP+ +  Y+LLSN+Y+S   W    ++RK MK   VRK PGCSW E  ++
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580

Query: 759 IHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           +H F  G   SH + E +   L+ L   +R+ GY PD S  LH+V+EEEK   L  HSE+
Sbjct: 581 VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSER 640

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+A+ +L    G  IRV KNLRVC+DCH A K ISK++ REIILRD  RFHHF+NG CS
Sbjct: 641 LAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECS 700

Query: 878 CGDYW 882
           C DYW
Sbjct: 701 CKDYW 705



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 6/199 (3%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +  V   N +++  G+ G ++    +VFD + E++  SW ++I    R G    AL+ F 
Sbjct: 262 VKPVIACNAMISGLGQKG-EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           +M    V P+  TL+S+   C++L+    L  G+QVH   +R   + + ++ + LM MY 
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLA---SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIA 287
           K G +  +K +F  F  +D++ WN+I+S  + +    EA+    +M L G  KP+ V+  
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437

Query: 288 SVLPACSHLEMLDTGKEIH 306
           + L ACS+  M++ G +I+
Sbjct: 438 ATLSACSYAGMVEEGLKIY 456



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 40/268 (14%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   SW   ++   R+    EA+  +I M +  ++P      ++L   A +  L  GK
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HA +V+  + +  V VA+ L+ MY KCG ++     +FDR   KD + WNS+I+    
Sbjct: 352 QVHAQLVRCQFDV-DVYVASVLMTMYIKCG-ELVKSKLIFDRFPSKDIIMWNSIISGYAS 409

Query: 158 FGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEW 215
            G  + AL+ F  M L  + +P+  T V+   ACS      +GL++   +          
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME--------- 460

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F +  + A YA                         +V  L +  +F EA+  +  M 
Sbjct: 461 SVFGVKPITAHYA------------------------CMVDMLGRAGRFNEAMEMIDSMT 496

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGK 303
              ++PD     S+L AC     LD  +
Sbjct: 497 ---VEPDAAVWGSLLGACRTHSQLDVAE 521


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 270/779 (34%), Positives = 391/779 (50%), Gaps = 95/779 (12%)

Query: 111 SSVTVA-NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +SV +A N+ +  Y + G  +    +VFD + +K  VSWNSM+A                
Sbjct: 13  TSVAIAYNSQIARYARIGQ-IESARRVFDEMPDKGIVSWNSMVAGY-------------- 57

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
              + N  P                        R+      ++ E NT   N L++ Y K
Sbjct: 58  ---FQNNRP------------------------REARYLFDKMPERNTVSWNGLISGYVK 90

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
              V +A+  F +  +R++VSW  +V    Q     EA     QM  + +    VS   +
Sbjct: 91  NRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV----VSWTVM 146

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L     +  +D      A  L + + + +    + ++  YC    +   R +FD +  + 
Sbjct: 147 LGGLIQVRRID-----EARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRN 201

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS-----SVVPACVRSEAFPD 404
           +  W  MI+GY QN   + A  LF  M E   +   A  M       +  A    +A P 
Sbjct: 202 VISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPV 261

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           K  +  +A+ LG G++              G +  ++ +FD +  +D  +W+ MI  Y  
Sbjct: 262 KAVVACNAMILGFGQN--------------GEVAKARQVFDQIREKDDGTWSAMIKVYER 307

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G   +AL L   MQ       R  V          + N  +L++VL  C +L++L  G+
Sbjct: 308 KGFEVEALNLFALMQ-------REGV----------QSNFPSLISVLSVCASLASLDHGR 350

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           ++HA  +++   +DV V S L+ MY KCG L  AR++FD    ++++ WN II  Y  HG
Sbjct: 351 QVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHG 410

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             +E L++   M + G     +  + VTF+ + +ACS++G V EG+++F  MK  Y +EP
Sbjct: 411 LVEEALQVFHEMCSSG-----MATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEP 465

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HYAC+VDLLGRAG V DA  LI  MP E D A  W +LLGACR H N+ + E+AA+ 
Sbjct: 466 KTEHYACMVDLLGRAGLVNDAMDLIQKMPVEAD-AIIWGALLGACRTHMNMNLAEVAAKK 524

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           L  LEP  A  Y+LLSNIY+S   W    ++R+ M+   V K PGCSWIE    +H F  
Sbjct: 525 LLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTG 584

Query: 765 G-DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           G    H +   +   LE L   +R+ GY PD+S VLH+V+EEEK   L  HSE+LA+AFG
Sbjct: 585 GVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFG 644

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +L  P G  IRV KNLRVC DCH A K I+KI  REIILRD  RFHHFK+G CSC DYW
Sbjct: 645 LLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 5/197 (2%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           + +V   N ++  +G+ G ++    +VFD+I EKD  +W++MI    R G    AL  F 
Sbjct: 261 VKAVVACNAMILGFGQNG-EVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFA 319

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           +M    V+ +  +L+SV   C++L+  D    GRQVH   ++   + + F+ + L+ MY 
Sbjct: 320 LMQREGVQSNFPSLISVLSVCASLASLDH---GRQVHAELVKSQFDSDVFVASVLITMYV 376

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +  A+ +F  F  +D+V WN+I++  +Q+    EA+    +M   G+  DGV+   
Sbjct: 377 KCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVG 436

Query: 289 VLPACSHLEMLDTGKEI 305
           VL ACS+   +  G EI
Sbjct: 437 VLSACSYTGKVKEGLEI 453



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 38  QTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           Q R K+  +W   ++   R     EA+  +  M R  +Q +  +  +VL   A +  L  
Sbjct: 289 QIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDH 348

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+HA +VK  +  S V VA+ L+ MY KCG D+    ++FDR + KD V WNS+I   
Sbjct: 349 GRQVHAELVKSQFD-SDVFVASVLITMYVKCG-DLVKARQIFDRFSPKDIVMWNSIITGY 406

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGE 214
            + G  + AL+ F  M  S +     T V V  ACS   + ++GL +   +    L   E
Sbjct: 407 AQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV--E 464

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             T     ++ +  + G V+DA  L +    + D + W  ++ +
Sbjct: 465 PKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 419/763 (54%), Gaps = 40/763 (5%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
            SLP P S +    S+   +   +     R+ + +Y  M ++ +  D + FP++LKA + 
Sbjct: 22  VSLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSS 81

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSW 148
           +   SLG  +H  ++  G  L +  +A++L+N Y K G    DV  KVFD + E++ V W
Sbjct: 82  LNLFSLGLSLHQRILVSGLSLDAY-IASSLINFYAKFG--FADVARKVFDFMPERNVVPW 138

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
            S+I    R G+   A   F  M    ++PSS T++S+    S L+    L      HG+
Sbjct: 139 TSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCL------HGS 192

Query: 209 SLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           ++  G  +   + N++++MY K   ++ ++ LF   + RDLVSWN++VS+ +Q     E 
Sbjct: 193 AILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEV 252

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           ++ L+ M ++G +PD  +  SVL   +    L  G+ +H   LR    +D + V ++L+ 
Sbjct: 253 LLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLD-AHVETSLIV 311

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY     ++   R+F+   DK + LW AMI+G  QN   ++AL +F +M +  G+  +  
Sbjct: 312 MYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF-GVKSSTA 370

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM+SV+ AC +  ++     +HG+  +  L  D   QN+L+ M+++ G ++ S  +FD M
Sbjct: 371 TMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKM 430

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             R+ VSWN MITGY   G    AL L  EM++  +                  P+SIT+
Sbjct: 431 NKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQ-----------------TPDSITI 473

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L GC +   L  GK IH++ IRN L   ++V ++LVDMY KCG L+ A+R F+ MP 
Sbjct: 474 VSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPS 533

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            ++++W+ II+ YG HG+G+  L      +  G     +KPN V F+++ ++CSH+G+V 
Sbjct: 534 HDLVSWSAIIVGYGYHGKGETALRFYSKFLESG-----MKPNHVIFLSVLSSCSHNGLVE 588

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI--NMMPPEFDKAGAWSSL 685
           +G++++  M  D+GI P+ +H+ACVVDLL RAG+VE+AY L       P  D  G    +
Sbjct: 589 QGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGI---I 645

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           L ACR + N E+G+  A ++ +L+P  A ++V L++ Y+S   W++  +    M+ +G++
Sbjct: 646 LDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLK 705

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           K PG S+I+    I  F     SH Q +++   L+ L + M K
Sbjct: 706 KIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKFLRKEMIK 748


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/699 (34%), Positives = 397/699 (56%), Gaps = 34/699 (4%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           N S+      G QVH  ++ +G     IMN  L+ MY K  RVD A ++F    +R++VS
Sbjct: 13  NCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVS 72

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W  ++    Q      ++  L +M   G+KP+  + ++ L AC  L +++ G +IH   +
Sbjct: 73  WTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCV 132

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           ++      S VG+A +DMY  C  +    +VF+ +  + +  WNAMI G+       ++L
Sbjct: 133 KSGFEWV-SVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSL 191

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG--LGRDRYVQNALM 428
           +LF +M+   G  P+  T +S + AC    A      IH   I  G  +     + +A++
Sbjct: 192 VLFQRMQG-QGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIV 250

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           D+Y++ G +  ++ +FD +E ++ +SW+ +I G+   G   +A+ L R++        R 
Sbjct: 251 DLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL--------RE 302

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGA-LSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           +V ++D  VL          +++ G  A L+ + +GK++H Y ++     D+ V ++++D
Sbjct: 303 SVSNVDGFVL----------SIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIID 352

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY KCG    A R+F  M VRNV++W V+I  YG HG G++ + L   M  +G     ++
Sbjct: 353 MYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDG-----IE 407

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
            +EV ++AL +ACSHSG++ E  + F ++ +++ ++P+ +HYAC+VD+LGRAG++++A  
Sbjct: 408 LDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKN 467

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  M  + ++ G W +LL ACR+H N+EIG    + LF ++ D   +YV++SNIY+ A 
Sbjct: 468 LIENMKLKPNE-GIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAG 526

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            W +   VRK +K  G++KE G SW+E   EIH F  GD +H  +E++H  L+ +  R++
Sbjct: 527 YWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVK 586

Query: 788 KE-GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL---NTPPGTTIRVAKNLRVCN 843
           +E GY       LH+V EE KE  L  HSEKLAI   ++       G  IRV KNLRVC 
Sbjct: 587 EEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCG 646

Query: 844 DCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           DCH+  K +SKI  +  ++RD  RFH F++G CSCGDYW
Sbjct: 647 DCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 253/511 (49%), Gaps = 36/511 (7%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G Q+HA  V  G+G   + + N L++MYGKC S +     VFDR+ E++ VSW +++   
Sbjct: 23  GLQVHAAAVNMGFGFD-LIMNNDLIDMYGKC-SRVDLACSVFDRMLERNVVSWTALMCGY 80

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            + G    +L     M YS V+P+ FT  +   AC  L   +    G Q+HG  ++ G E
Sbjct: 81  LQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVEN---GMQIHGMCVKSGFE 137

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           W + + NA + MY+K GR+  A+ +F     R+LVSWN +++  +      ++++  ++M
Sbjct: 138 WVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRM 197

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCR 333
             +G  PD  +  S L AC  L  +  G +IHA  +     I   + + SA+VD+Y  C 
Sbjct: 198 QGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCG 257

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   ++VFD I  K +  W+A+I G+ Q     EA+ LF ++ E      +   +S ++
Sbjct: 258 YLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN-VDGFVLSIMM 316

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                       + +H + +K+  G D  V N+++DMY + G  E ++ +F +M+VR+ V
Sbjct: 317 GVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVV 376

Query: 454 SWNTMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           SW  MITGY   G+HG    A+ L   MQ         +  +LDE         +  + +
Sbjct: 377 SWTVMITGY---GKHGLGEKAIHLFNRMQ--------LDGIELDE---------VAYLAL 416

Query: 511 LPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
           L  C     + + +E  +    N  +  ++   + +VD+  + G L  A+ + + M ++ 
Sbjct: 417 LSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKP 476

Query: 569 NVITWNVIIMAYGMHGE---GQEVLELLKNM 596
           N   W  ++ A  +HG    G+EV E+L  M
Sbjct: 477 NEGIWQTLLSACRVHGNLEIGREVGEILFRM 507



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 216/436 (49%), Gaps = 23/436 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +    + ++    EM  S ++P+ F F   LKA   +  +  G QIH   
Sbjct: 72  SWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMC 131

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G+   SV V N  ++MY KCG  +    +VF+++  ++ VSWN+MIA     G    
Sbjct: 132 VKSGFEWVSV-VGNATIDMYSKCGR-IGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG---EWNTFIM 220
           +L  F+ M      P  FT  S   AC  L     +R G Q+H + +  G        I 
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALG---AIRGGTQIHASLITRGFPISIRNIIA 246

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           +A++ +YAK G + +A+ +F   E ++L+SW+ ++   +Q    LEA+   RQ+      
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            DG  ++ ++   + L +++ GK++H Y L+    +D S V ++++DMY  C   E   R
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDIS-VANSIIDMYLKCGLTEEAER 365

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  +  + +  W  MITGYG++   E+A+ LF +M ++ G+  +     +++ AC  S 
Sbjct: 366 LFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRM-QLDGIELDEVAYLALLSACSHSG 424

Query: 401 AFPDKEG-----IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS- 454
              + +       + H +K  +  + Y    ++D+  R G+++ +K + ++M+++     
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNI--EHYA--CMVDILGRAGQLKEAKNLIENMKLKPNEGI 480

Query: 455 WNTMITGYTICGQHGD 470
           W T+++    C  HG+
Sbjct: 481 WQTLLSA---CRVHGN 493



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 192/394 (48%), Gaps = 37/394 (9%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRN----DILIDNSFVGSALVDMYCNCREVECGRRV 341
           +A +L  CS   + D G ++HA A+      D++++N      L+DMY  C  V+    V
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNND-----LIDMYGKCSRVDLACSV 61

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD + ++ +  W A++ GY Q    + +L L  +M   +G+ PN  T S+ + AC     
Sbjct: 62  FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEM-GYSGVKPNEFTFSTSLKACGALGV 120

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             +   IHG  +K G      V NA +DMYS+ GRI +++ +F+ M  R+ VSWN MI G
Sbjct: 121 VENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAG 180

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +T  G    +L+L + MQ   E                  P+  T  + L  CGAL A+ 
Sbjct: 181 HTHEGNGRKSLVLFQRMQGQGE-----------------VPDEFTFTSTLKACGALGAIR 223

Query: 522 KGKEIHAYAIRNMLATDV--VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
            G +IHA  I       +  ++ SA+VD+YAKCG L  A++VFD +  +N+I+W+ +I  
Sbjct: 224 GGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQG 283

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKD 638
           +   G   E ++L + +     R      +      +    +   +V +G  +  Y +K 
Sbjct: 284 FAQEGNLLEAMDLFRQL-----RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKV 338

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
             G++ S  +   ++D+  + G  E+A +L + M
Sbjct: 339 PSGLDISVAN--SIIDMYLKCGLTEEAERLFSEM 370



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 25/299 (8%)

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           ++ ++  C ++  F     +H  A+ +G G D  + N L+DMY +  R++++ ++FD M 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            R+ VSW  ++ GY   G    +L LL EM                      KPN  T  
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEM-----------------GYSGVKPNEFTFS 109

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           T L  CGAL  +  G +IH   +++      VVG+A +DMY+KCG +  A +VF+ MP R
Sbjct: 110 TSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR 169

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           N+++WN +I  +   G G++ L L + M  +    GEV P+E TF +   AC   G +  
Sbjct: 170 NLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQ----GEV-PDEFTFTSTLKACGALGAIRG 224

Query: 629 GMDLFYKM-KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           G  +   +    + I       + +VDL  + G + +A ++ + +  E     +WS+L+
Sbjct: 225 GTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRI--EQKNLISWSALI 281


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/635 (37%), Positives = 359/635 (56%), Gaps = 67/635 (10%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR---VF 342
           + S+L  C+    +   K++HA+ +RN  L   S+V + L+ M     +V  G     VF
Sbjct: 45  LMSILHDCTLFSQI---KQVHAHIIRNG-LSQCSYVLTKLIRMLTKV-DVPMGSYPLLVF 99

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             ++     LW AMI GY       E+   + +M    G+ P + T S++  AC  +   
Sbjct: 100 GQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRR-DGVGPVSFTFSALFKACGAALNM 158

Query: 403 PDKEGIHGHAIKLG-LGRDRYVQNALMDMY------------------------------ 431
              + +H   I +G    D YV N+++D+Y                              
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 432 -SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            ++ G +E +  +FDD+ ++D V+W  M+TGY   G+  +AL   ++MQ++  E +    
Sbjct: 219 YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDE--- 275

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML--ATDVVVGSALVDM 548
                         +TL  V+  C  L A+     I   A R+    + +VVVGSAL+DM
Sbjct: 276 --------------VTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDM 321

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y+KCG  + A +VF++M  RNV +++ +I+ Y MHG     L+L  +M+       E++P
Sbjct: 322 YSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT-----EIRP 376

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N+VTFI + +ACSH+G+V +G  LF KM+  +G+ PSPDHYAC+VDLLGRAG +E+A  L
Sbjct: 377 NKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDL 436

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           +  MP E    G W +LLGACRIH N +I +IAA  LF LEP+   +Y+LLSNIY+SA  
Sbjct: 437 VKTMPME-PNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGR 495

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGD-EIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           W++   +RK ++E G +K PGCSW E  + EIH F AGD +H +S ++   L+ L ER+R
Sbjct: 496 WEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLR 555

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
             GY P+     +++ ++EKE +L  HSEKLA+A+G+L T  G TI++ KN+R+C DCH 
Sbjct: 556 SHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHN 615

Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
                S+I  REII+RD  RFHHF NGTCSCG++W
Sbjct: 616 VMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 187/420 (44%), Gaps = 56/420 (13%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL--FKSFEDRDLVSWNTIVSSLS 259
           +QVH + +R G    ++++  L+ M  K+     +  L  F      +   W  ++   +
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
                 E+  F  +M   G+ P   + +++  AC     +D GK++HA  +       + 
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISD-------------------------------K 348
           +VG++++D+Y  C  + C R+VFD +S+                               K
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  W AM+TGY QN   +EAL  F KM++V G+  +  T++ V+ AC +  A      I
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDV-GMETDEVTLAGVISACAQLGAVKHANWI 297

Query: 409 HGHAIKLGLGR--DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
              A + G G   +  V +AL+DMYS+ G  + +  +F+ M+ R+  S+++MI GY + G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           +   AL L  +M   E                  +PN +T + +L  C     + +G+++
Sbjct: 358 RAHSALQLFHDMLKTE-----------------IRPNKVTFIGILSACSHAGLVEQGRQL 400

Query: 527 HAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            A   +   +A      + +VD+  + GCL  A  +   MP+  N   W  ++ A  +HG
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 30/293 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A      E+   Y  M R  + P +F F A+ KA     ++ LGKQ+HA  +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169

Query: 105 KYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVY 134
             G   S + V N+++++Y KCG                               DM    
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            +FD +  KD V+W +M+    + G+   ALE F+ M    +E    TL  V  AC+ L 
Sbjct: 230 GLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                   R +   S      N  + +AL+ MY+K G  D+A  +F+  ++R++ S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +   + + +   A+     M    I+P+ V+   +L ACSH  +++ G+++ A
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA 402



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 198/474 (41%), Gaps = 65/474 (13%)

Query: 63  LSYIEMTRSDIQPDNFAFPAV--------LKAVAGIQDLSLG---KQIHAHVVKYGYGLS 111
           LS+++  ++   P+   FP +         + ++ + D +L    KQ+HAH+++ G    
Sbjct: 14  LSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQC 73

Query: 112 SVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           S  V   L+ M  K    M      VF ++   +   W +MI      G    +   +  
Sbjct: 74  SY-VLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTR 132

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNA------ 222
           M    V P SFT  ++  AC      D   LG+QVH  ++ +G +  + ++ N+      
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMD---LGKQVHAQTILIGGFASDLYVGNSMIDLYV 189

Query: 223 -------------------------LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
                                    L+  YAK G ++ A  LF     +D+V+W  +V+ 
Sbjct: 190 KCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTG 249

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LI 316
            +QN +  EA+ + ++M   G++ D V++A V+ AC+ L  +     I   A R+     
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N  VGSAL+DMY  C   +   +VF+ + ++ +  +++MI GY  +     AL LF  M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369

Query: 377 EEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
            +   + PN  T   ++ AC  +       + F   E   G A       D Y    ++D
Sbjct: 370 LKTE-IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS----PDHYA--CMVD 422

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
           +  R G +E +  +   M +      W  ++    I G    A +   E+  +E
Sbjct: 423 LLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE 476



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++ + +EA+  + +M    ++ D      V+ A A +  +     I    
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIA 301

Query: 104 VKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            + G+G S +V V + L++MY KCGS   + YKVF+ + E++  S++SMI      G+  
Sbjct: 302 ERSGFGPSGNVVVGSALIDMYSKCGSPD-EAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            AL+ F  ML + + P+  T + +  ACS+
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSH 390


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/620 (38%), Positives = 356/620 (57%), Gaps = 37/620 (5%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR---VF 342
           + S+L  C+    +   K++HA+ +RN  L   S+V + L+ M     +V  G     VF
Sbjct: 45  LMSILHDCTLFSQI---KQVHAHIIRNG-LSQCSYVLTKLIRMLTKV-DVPMGSYPLLVF 99

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             ++     LW AMI GY       E+   + +M    G+ P + T S++  AC  +   
Sbjct: 100 GQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRR-DGVGPVSFTFSALFKACGAALNM 158

Query: 403 PDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
              + +H   I +G    D YV N+++D+Y + G +  ++ +FD+M  RD VSW  +I  
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218

Query: 462 YTICGQHGDALMLLREM----------------QNMEEEKNRNNVYDLDETVLRPKPNSI 505
           Y   G    A  L  ++                QN   ++       + +  +  + + +
Sbjct: 219 YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGM--ETDEV 276

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNML--ATDVVVGSALVDMYAKCGCLNFARRVFD 563
           TL  V+  C  L A+     I   A R+    + +VVVGSAL+DMY+KCG  + A +VF+
Sbjct: 277 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 336

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
           +M  RNV +++ +I+ Y MHG     L+L  +M+       E++PN+VTFI + +ACSH+
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT-----EIRPNKVTFIGILSACSHA 391

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G+V +G  LF KM+  +G+ PSPDHYAC+VDLLGRAG +E+A  L+  MP E    G W 
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPME-PNGGVWG 450

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           +LLGACRIH N +I +IAA  LF LEP+   +Y+LLSNIY+SA  W++   +RK ++E G
Sbjct: 451 ALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKG 510

Query: 744 VRKEPGCSWIEFGD-EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
            +K PGCSW E  + EIH F AGD +H +S ++   L+ L ER+R  GY P+     +++
Sbjct: 511 FKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDL 570

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            ++EKE +L  HSEKLA+A+G+L T  G TI++ KN+R+C DCH      S+I  REII+
Sbjct: 571 TDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIV 630

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFHHF NGTCSCG++W
Sbjct: 631 RDNMRFHHFHNGTCSCGNFW 650



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 187/420 (44%), Gaps = 56/420 (13%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL--FKSFEDRDLVSWNTIVSSLS 259
           +QVH + +R G    ++++  L+ M  K+     +  L  F      +   W  ++   +
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
                 E+  F  +M   G+ P   + +++  AC     +D GK++HA  +       + 
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISD-------------------------------K 348
           +VG++++D+Y  C  + C R+VFD +S+                               K
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  W AM+TGY QN   +EAL  F KM++V G+  +  T++ V+ AC +  A      I
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDV-GMETDEVTLAGVISACAQLGAVKHANWI 297

Query: 409 HGHAIKLGLGR--DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
              A + G G   +  V +AL+DMYS+ G  + +  +F+ M+ R+  S+++MI GY + G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           +   AL L  +M   E                  +PN +T + +L  C     + +G+++
Sbjct: 358 RAHSALQLFHDMLKTE-----------------IRPNKVTFIGILSACSHAGLVEQGRQL 400

Query: 527 HAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            A   +   +A      + +VD+  + GCL  A  +   MP+  N   W  ++ A  +HG
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 30/293 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A      E+   Y  M R  + P +F F A+ KA     ++ LGKQ+HA  +
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI 169

Query: 105 KYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVY 134
             G   S + V N+++++Y KCG                               DM    
Sbjct: 170 LIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESAS 229

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            +FD +  KD V+W +M+    + G+   ALE F+ M    +E    TL  V  AC+ L 
Sbjct: 230 GLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLG 289

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                   R +   S      N  + +AL+ MY+K G  D+A  +F+  ++R++ S++++
Sbjct: 290 AVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSM 349

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +   + + +   A+     M    I+P+ V+   +L ACSH  +++ G+++ A
Sbjct: 350 ILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFA 402



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 198/474 (41%), Gaps = 65/474 (13%)

Query: 63  LSYIEMTRSDIQPDNFAFPAV--------LKAVAGIQDLSLG---KQIHAHVVKYGYGLS 111
           LS+++  ++   P+   FP +         + ++ + D +L    KQ+HAH+++ G    
Sbjct: 14  LSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQC 73

Query: 112 SVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           S  V   L+ M  K    M      VF ++   +   W +MI      G    +   +  
Sbjct: 74  SY-VLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTR 132

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNA------ 222
           M    V P SFT  ++  AC      D   LG+QVH  ++ +G +  + ++ N+      
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMD---LGKQVHAQTILIGGFASDLYVGNSMIDLYV 189

Query: 223 -------------------------LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
                                    L+  YAK G ++ A  LF     +D+V+W  +V+ 
Sbjct: 190 KCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTG 249

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LI 316
            +QN +  EA+ + ++M   G++ D V++A V+ AC+ L  +     I   A R+     
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N  VGSAL+DMY  C   +   +VF+ + ++ +  +++MI GY  +     AL LF  M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369

Query: 377 EEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
            +   + PN  T   ++ AC  +       + F   E   G A       D Y    ++D
Sbjct: 370 LKTE-IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS----PDHYA--CMVD 422

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNME 482
           +  R G +E +  +   M +      W  ++    I G    A +   E+  +E
Sbjct: 423 LLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLE 476



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++ + +EA+  + +M    ++ D      V+ A A +  +     I    
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIA 301

Query: 104 VKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            + G+G S +V V + L++MY KCGS   + YKVF+ + E++  S++SMI      G+  
Sbjct: 302 ERSGFGPSGNVVVGSALIDMYSKCGSPD-EAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            AL+ F  ML + + P+  T + +  ACS+
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSH 390


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/772 (33%), Positives = 415/772 (53%), Gaps = 74/772 (9%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N +++ Y K G ++ +  K+FD + E+  V+W  +I    +  ++  A E F  M     
Sbjct: 82  NMMISGYVKSG-NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 140

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
           EP   T V++   C      +G  +G Q+                 +     KLG     
Sbjct: 141 EPDYVTFVTLLSGC------NGHEMGNQI---------------TQVQTQIIKLGY---- 175

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
                   D  L+  NT+V S  ++++   A    ++M     + D  + A+VL A   L
Sbjct: 176 --------DSRLIVGNTLVDSYCKSNRLDLACQLFKEMP----EIDSFTFAAVLCANIGL 223

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           + +  G++IH++ ++ +  + N FV +AL+D Y     V   R++FD + ++    +N +
Sbjct: 224 DDIVLGQQIHSFVIKTN-FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVI 282

Query: 357 ITGYGQNEYDEEALMLFIKMEEVA---GLWPNATTMSSVVPACVRSEAFPDKEG--IHGH 411
           I+GY  +   + A  LF +++  A     +P AT +S      + S     + G  IH  
Sbjct: 283 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS------IASNTLDWEMGRQIHAQ 336

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            I      +  V N+L+DMY++ G+ E ++ IF ++  R  V W  MI+ Y   G + + 
Sbjct: 337 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 396

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L L  +M+                +V+    +  T  ++L    ++++L+ GK++H++ I
Sbjct: 397 LQLFNKMRQ--------------ASVI---ADQATFASLLRASASIASLSLGKQLHSFII 439

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++   ++V  GSAL+D+YAKCG +  A + F  MP RN+++WN +I AY  +GE +  L+
Sbjct: 440 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLK 499

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
             K MV  G     ++P+ V+F+ + +ACSHSG+V EG+  F  M   Y ++P  +HYA 
Sbjct: 500 SFKEMVLSG-----LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYAS 554

Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP- 710
           VVD+L R+G+  +A +L+  MP + D+   WSS+L ACRIH+N E+   AA  LF +E  
Sbjct: 555 VVDMLCRSGRFNEAEKLMAEMPIDPDEI-MWSSVLNACRIHKNQELARRAADQLFNMEEL 613

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
             A+ YV +SNIY++A  W+    V K M++ GV+K P  SW+E   E H F A D  H 
Sbjct: 614 RDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHP 673

Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           Q E++   ++ L++ M + GY PDTSC LHN +E+ K   L  HSE+LAIAF +++TP G
Sbjct: 674 QIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEG 733

Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + I V KNLR C DCH A K ISKI  REI +RD  RFHHF++G CSCGD+W
Sbjct: 734 SPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 258/562 (45%), Gaps = 73/562 (12%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   +W   +   ++ NQF+EA   +++M R   +PD   F  +L    G +  + 
Sbjct: 103 GMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQ 162

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
             Q+   ++K GY  S + V NTLV+ Y                                
Sbjct: 163 ITQVQTQIIKLGYD-SRLIVGNTLVDSY-------------------------------- 189

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
           C+  + DLA + F+ M     E  SFT    A+ C+N+   D + LG+Q+H   ++    
Sbjct: 190 CKSNRLDLACQLFKEM----PEIDSFTF--AAVLCANIG-LDDIVLGQQIHSFVIKTNFV 242

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           WN F+ NAL+  Y+K   V DA+ LF    ++D VS+N I+S  + + K   A    R++
Sbjct: 243 WNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFREL 302

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYC 330
                       A++L   S+    + G++IHA  +     ++IL     VG++LVDMY 
Sbjct: 303 QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL-----VGNSLVDMYA 357

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C + E    +F  ++ +    W AMI+ Y Q  + EE L LF KM + A +  +  T +
Sbjct: 358 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ-ASVIADQATFA 416

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S++ A     +    + +H   IK G   + +  +AL+D+Y++ G I+ +   F +M  R
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 476

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           + VSWN MI+ Y    Q+G+A   L+  + M               +   +P+S++ + V
Sbjct: 477 NIVSWNAMISAY---AQNGEAEATLKSFKEM--------------VLSGLQPDSVSFLGV 519

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR 568
           L  C   S L +    H  ++  +   D      +++VDM  + G  N A ++   MP+ 
Sbjct: 520 LSACSH-SGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPID 578

Query: 569 -NVITWNVIIMAYGMHGEGQEV 589
            + I W+ ++ A  +H + QE+
Sbjct: 579 PDEIMWSSVLNACRIH-KNQEL 599



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 224/510 (43%), Gaps = 70/510 (13%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           NT   N +++ Y K G + +A+ LF    +R  V+W  ++   SQ ++F EA     QM 
Sbjct: 77  NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR---NDILIDNSFVGSALVDMYCNC 332
             G +PD V+  ++L  C+  EM +   ++    ++   +  LI    VG+ LVD YC  
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI----VGNTLVDSYCKS 192

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
             ++                                A  LF +M E+     ++ T ++V
Sbjct: 193 NRLDL-------------------------------ACQLFKEMPEI-----DSFTFAAV 216

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           + A +  +     + IH   IK     + +V NAL+D YS+   +  ++ +FD+M  +D 
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 276

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VS+N +I+GY   G+H  A  L RE+Q    ++ +                     T+L 
Sbjct: 277 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ-----------------FPFATMLS 319

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                     G++IHA  I     ++++VG++LVDMYAKCG    A  +F  +  R+ + 
Sbjct: 320 IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP 379

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W  +I AY   G  +E L+L   M     R   V  ++ TF +L  A +    +S G  L
Sbjct: 380 WTAMISAYVQKGFYEEGLQLFNKM-----RQASVIADQATFASLLRASASIASLSLGKQL 434

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
            +      G   +    + ++D+  + G ++DA Q    MP       +W++++ A   +
Sbjct: 435 -HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR--NIVSWNAMISAYAQN 491

Query: 693 QNVEIGEIAAQNLFL--LEPDVASHYVLLS 720
              E    + + + L  L+PD  S   +LS
Sbjct: 492 GEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 14/186 (7%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           I    +K G   D    N  +  + + G +  ++ +F+ M  ++TVS N MI+GY   G 
Sbjct: 34  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93

Query: 468 HGDALMLLREM------------QNMEEEKNRNNVYDLDETVLR--PKPNSITLMTVLPG 513
            G+A  L   M                +       ++L   + R   +P+ +T +T+L G
Sbjct: 94  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C       +  ++    I+    + ++VG+ LVD Y K   L+ A ++F  MP  +  T+
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213

Query: 574 NVIIMA 579
             ++ A
Sbjct: 214 AAVLCA 219



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 26/242 (10%)

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
           M   + V  + ++  Y K G L  AR++FD M  R  +TW ++I  Y    + +E  EL 
Sbjct: 73  MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 132

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGM---VSEGMDLFYKMKDDYGIEPSPDHYA 650
             M   G+     +P+ VTF+ L + C+   M   +++      K+  D  +        
Sbjct: 133 VQMQRCGT-----EPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN---- 183

Query: 651 CVVDLLGRAGKVEDAYQLINMMPP--EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
            +VD   ++ +++ A QL   MP    F  A    + +G   I    +I     +  F+ 
Sbjct: 184 TLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVW 243

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
              V++    L + YS     D  +D RK   EM   ++ G S+    + I    A DG 
Sbjct: 244 NVFVSN---ALLDFYSKH---DSVIDARKLFDEMP--EQDGVSY----NVIISGYAWDGK 291

Query: 769 HQ 770
           H+
Sbjct: 292 HK 293


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/733 (34%), Positives = 407/733 (55%), Gaps = 36/733 (4%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           +++P    F  +L+       +   K IH  ++  G   S   +AN L+N+  K  SD  
Sbjct: 44  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ-SDTFLANILINVCSK--SDRV 100

Query: 132 DVYKV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALA 189
           D  +V FD++  K+ ++W+SM++   + G  + AL  F  +   S   P+ F L SV  A
Sbjct: 101 DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRA 160

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           C+ L     +  G Q+HG  +R G + + ++  +L+  Y+K G +++A+ +F    ++  
Sbjct: 161 CTQLGV---VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTA 217

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           V+W TI++  ++  +   ++    QM    + PD   ++SVL ACS LE L+ GK+IHAY
Sbjct: 218 VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAY 277

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
            LR    +D S V + L+D Y  C  V+ GR++FD +  K I  W  MI+GY QN +D E
Sbjct: 278 VLRRGTEMDVSVV-NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 336

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A+ LF +M  + G  P+    +SV+ +C   EA      +H + IK  L  D +V+N L+
Sbjct: 337 AMKLFGEMNRL-GWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           DMY++   +  +K +FD M  ++ +S+N MI GY+   +  +AL L  EM+         
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR--------- 446

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                   V   KPN  T   ++     L++L  G++ H   ++  L     V +ALVDM
Sbjct: 447 --------VRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDM 498

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKCG +  AR++F+    R+V+ WN +I  +  HGE +E L + + M+ EG     ++P
Sbjct: 499 YAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG-----IQP 553

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N VTF+A+ +ACSH+G V +G++ F  M   +GI+P  +HYACVV LLGR+GK+ +A + 
Sbjct: 554 NYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEF 612

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP E   A  W SLL ACRI  NVE+G+ AA+     +P  +  Y+LLSNI++S  +
Sbjct: 613 IEKMPIE-PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGM 671

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           W     VR +M    V KEPG SWIE  ++++ F+A D +H++++ +   L+ L + ++ 
Sbjct: 672 WADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQHIKG 730

Query: 789 EGYVPDTSCVLHN 801
            GYVPD + +L N
Sbjct: 731 AGYVPDATALLMN 743



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 216/409 (52%), Gaps = 19/409 (4%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           + +M  +++ PD +   +VL A + ++ L  GKQIHA+V++ G  +  V+V N L++ Y 
Sbjct: 240 FAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM-DVSVVNVLIDFYT 298

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG-KWDLALEAFRMMLYSNVEPSSFTL 183
           KC + +    K+FD++  K+ +SW +MI+   +    W+ A++ F  M     +P  F  
Sbjct: 299 KC-NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE-AMKLFGEMNRLGWKPDGFAC 356

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            SV  +C +   R+ L  GRQVH  +++   E + F+ N L+ MYAK   + DAK +F  
Sbjct: 357 TSVLTSCGS---REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDV 413

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +++++S+N ++   S  +K  EA+    +M +R  KP+  + A+++ A S+L  L  G
Sbjct: 414 MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHG 473

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           ++ H   ++  +     FV +ALVDMY  C  +E  R++F+    + +  WN+MI+ + Q
Sbjct: 474 QQFHNQLVKMGLDF-CPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 532

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLG 418
           +   EEAL +F +M +  G+ PN  T  +V+ AC  +    D       + G  IK G  
Sbjct: 533 HGEAEEALGMFREMMK-EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGT- 590

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD-TVSWNTMITGYTICG 466
            + Y    ++ +  R G++  +K   + M +    + W ++++   I G
Sbjct: 591 -EHYA--CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAG 636



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 141/244 (57%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  + EM R   +PD FA  +VL +    + L  G+Q+HA+ +K     S   V N L
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLE-SDEFVKNGL 394

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MY K  + + D  KVFD + E++ +S+N+MI       K   ALE F  M     +P+
Sbjct: 395 IDMYAK-SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPN 453

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            FT  ++  A SNL+    LR G+Q H   +++G ++  F+ NAL+ MYAK G +++A+ 
Sbjct: 454 EFTFAALITAASNLA---SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARK 510

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F S   RD+V WN+++S+ +Q+ +  EA+   R+M   GI+P+ V+  +VL ACSH   
Sbjct: 511 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 570

Query: 299 LDTG 302
           ++ G
Sbjct: 571 VEDG 574



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 24/296 (8%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           ++  L P     ++++   +        + IHG  I  GL  D ++ N L+++ S+  R+
Sbjct: 41  QIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRV 100

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           + ++ +FD M  ++ ++W++M++ Y+  G   +ALM+  ++Q    E             
Sbjct: 101 DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGE------------- 147

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               PN   L +V+  C  L  + KG ++H + +R+    DV VG++L+D Y+K G +  
Sbjct: 148 ---HPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 204

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VFD +  +  +TW  II  Y   G     LEL   M     R   V P+     ++ 
Sbjct: 205 ARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQM-----RETNVVPDRYVVSSVL 259

Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           +ACS    +  G  +  Y ++   G E        ++D   +  +V+   +L + M
Sbjct: 260 SACSMLEFLEGGKQIHAYVLRR--GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 313


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/770 (33%), Positives = 413/770 (53%), Gaps = 41/770 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++   +++I  +++M    +  D+      LK  + ++D  LG QIH   
Sbjct: 124 SWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIA 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+ G+    VT  + LV+MY KC S + D   VF  + +K+ +SW++ IA   +  +   
Sbjct: 184 VQMGFDYDVVT-GSALVDMYAKCNS-LEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLR 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NA 222
            L+ F+ M    +  S  T  SV  +C+ LS     RLG Q+H ++L+    +  I+  A
Sbjct: 242 GLKLFKEMQRKGIGVSQSTYASVFRSCAGLSAS---RLGTQLHCHALKTDFGSDVIVGTA 298

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK   + DA  LF    D +L S+N ++   ++N++  +A     Q+       D
Sbjct: 299 TLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFD 358

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            VS++  L A + ++    G ++H  A++++ L  N  V +A++DMY  C  +     +F
Sbjct: 359 EVSLSGALSAAAVIKGHSEGLQLHGLAIKSN-LSSNICVANAILDMYGKCGALVEASGLF 417

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEAL-----MLFIKMEEVAGLWPNATTMSSVVPACV 397
           D +  +    WNA+IT   QNE + + L     ML  KME      P+  T  SV+ AC 
Sbjct: 418 DEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME------PDEFTYGSVLKACA 471

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
              AF +   +HG  IK G+G   +V +AL+DMYS+ G +E ++ I   +E +  VSWN 
Sbjct: 472 GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNA 531

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I+G+++  +  D+      M  M  E                 P++ T  TVL  C  L
Sbjct: 532 IISGFSLQKKSEDSQRFFSHMLEMGVE-----------------PDNFTYATVLDTCANL 574

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           + +  GK+IHA  I+  L +DV + S LVDMY+KCG ++ +  +F   P R+ +TWN +I
Sbjct: 575 ATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMI 634

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             +  HG G+E LEL ++M+ E      +KPN  TF+++  ACSH G   +G+  F KM 
Sbjct: 635 CGFAYHGLGEEALELFEHMLHEN-----IKPNHATFVSVLRACSHVGNAKKGLFYFQKMA 689

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
             Y +EP  +HY+C+VD+LGR+G+VE+A +LI  MP E D A  W +LL  C+I  NVE+
Sbjct: 690 SIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEAD-AIIWRTLLSICKIQGNVEV 748

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
            E AA +L  L+P+ +S Y LLSNIY+ A +W +   +R+ M+   ++KEPGCSWIE  D
Sbjct: 749 AEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKD 808

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
           E+H FL  D +H + E ++  L+ L   MR+ G  P+   +     EE +
Sbjct: 809 EVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEENR 858



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 307/628 (48%), Gaps = 65/628 (10%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  + +  +  + L  GK+ HAH++  G+   +V V N L+ MY KC +  +  YKVF+ 
Sbjct: 27  FSHIFQECSNRRALKPGKEAHAHMILSGF-TPTVFVTNCLIQMYVKCCALEY-AYKVFEE 84

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR---- 195
           + ++D VSWN+M+      G+ +LA   F  M +     S  +L+S  L   ++ +    
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 196 ----RD------------GLR---------LGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
               RD             L+         LG Q+HG ++++G +++    +AL+ MYAK
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
              ++D+  +F    D++ +SW+  ++   QND+ L  +   ++M  +GI     + ASV
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
             +C+ L     G ++H +AL+ D   D   VG+A +DMY  C  +    ++F  + D  
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSD-VIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  +NAMI GY +NE   +A  LF+++++ +  + +  ++S  + A    +   +   +H
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSF-DEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G AIK  L  +  V NA++DMY + G +  +  +FD+ME+RD VSWN +IT         
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACE------ 436

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPK--PNSITLMTVLPGCGALSALAKGKEIH 527
                    QN  E K  ++       +LR K  P+  T  +VL  C    A + G E+H
Sbjct: 437 ---------QNESEGKTLSHF----GAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVH 483

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              I++ +   + VGSALVDMY+KCG +  A ++   +  + +++WN II  + +  + +
Sbjct: 484 GRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSE 543

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           +      +M+  G     V+P+  T+  +   C++   V  G  +  +M     +E   D
Sbjct: 544 DSQRFFSHMLEMG-----VEPDNFTYATVLDTCANLATVGLGKQIHAQM---IKLELLSD 595

Query: 648 HY--ACVVDLLGRAGKVEDAYQLINMMP 673
            Y  + +VD+  + G + D+  +    P
Sbjct: 596 VYITSTLVDMYSKCGNMHDSLLMFRKAP 623



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 238/521 (45%), Gaps = 63/521 (12%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKL---------- 230
           T   +   CSN   R  L+ G++ H + +  G   T F+ N L+ MY K           
Sbjct: 26  TFSHIFQECSN---RRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVF 82

Query: 231 ---------------------GRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAV 268
                                GR++ A+ +F S     D+VSWN+++S   QN    +++
Sbjct: 83  EEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSI 142

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
               +M   G+  D  ++A  L  CS LE    G +IH  A++     D    GSALVDM
Sbjct: 143 AVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYD-VVTGSALVDM 201

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  +E    VF  + DK    W+A I G  QN+     L LF +M+   G+  + +T
Sbjct: 202 YAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQR-KGIGVSQST 260

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            +SV  +C    A      +H HA+K   G D  V  A +DMY++   +  +  +F  + 
Sbjct: 261 YASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
             +  S+N MI GY    Q   A  L  ++Q         N +  DE         ++L 
Sbjct: 321 DHNLQSYNAMIIGYARNEQGFQAFKLFLQLQ--------KNSFSFDE---------VSLS 363

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
             L     +   ++G ++H  AI++ L++++ V +A++DMY KCG L  A  +FD M +R
Sbjct: 364 GALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR 423

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           + ++WN II A   +    + L     M+       +++P+E T+ ++  AC+     S 
Sbjct: 424 DPVSWNAIITACEQNESEGKTLSHFGAMLR-----SKMEPDEFTYGSVLKACAGQRAFSN 478

Query: 629 GMDLFYK-MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           GM++  + +K   G++      + +VD+  + G +E+A ++
Sbjct: 479 GMEVHGRIIKSGMGLKMFVG--SALVDMYSKCGMMEEAEKI 517



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 246/543 (45%), Gaps = 93/543 (17%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           + + +   CS+   L  GKE HA+ + +       FV + L+ MY  C  +E   +VF+ 
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSG-FTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84

Query: 345 ISDKKIALWNAM--------------------------------ITGYGQNEYDEEALML 372
           +  + I  WN M                                I+GY QN   ++++ +
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F+KM ++ G+  + TT++  +  C   E       IHG A+++G   D    +AL+DMY+
Sbjct: 145 FLKMRDL-GVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           +   +E S  +F ++  ++ +SW+  I G     Q    L L +EMQ       R  +  
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ-------RKGI-- 254

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
                     +  T  +V   C  LSA   G ++H +A++    +DV+VG+A +DMYAKC
Sbjct: 255 --------GVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC 306

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
             ++ A ++F L+P  N+ ++N +I+ Y  + +G +  +L            +++ N  +
Sbjct: 307 DNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFL----------QLQKNSFS 356

Query: 613 F--IALFAACSHSGMV---SEGMDLFYKMKDDYGIEPSPDHYACV----VDLLGRAGKVE 663
           F  ++L  A S + ++   SEG+ L         I+ +     CV    +D+ G+ G + 
Sbjct: 357 FDEVSLSGALSAAAVIKGHSEGLQL-----HGLAIKSNLSSNICVANAILDMYGKCGALV 411

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL----EPDVASHYVLL 719
           +A  L + M  E     +W++++ AC   QN   G+  +    +L    EPD  ++  +L
Sbjct: 412 EASGLFDEM--EIRDPVSWNAIITACE--QNESEGKTLSHFGAMLRSKMEPDEFTYGSVL 467

Query: 720 SNIYSSAQLWDKAMDVRKKMKE--MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
               +  + +   M+V  ++ +  MG++   G + ++   +        G  +++E++H 
Sbjct: 468 KAC-AGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKC-------GMMEEAEKIHY 519

Query: 778 FLE 780
            LE
Sbjct: 520 RLE 522


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 266/782 (34%), Positives = 398/782 (50%), Gaps = 115/782 (14%)

Query: 201 LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF------------------- 240
           L R VH + +  G +    I+N L+ +Y+K  +++ A+ LF                   
Sbjct: 31  LARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYS 90

Query: 241 ---------KSFED-----RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
                    K F D     RD V +N ++++ S N     A+     M     +PD  + 
Sbjct: 91  AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNS-FVGS---ALVDMYCNCREVEC----- 337
            SVL A +    L   KE H   L   ++   + FV S   AL+  Y  C          
Sbjct: 151 TSVLGALA----LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSS 206

Query: 338 ----GRRVFDFI------------------------------SDKKIAL-WNAMITGYGQ 362
                R++FD +                              + KK+ + WNAMI+GY  
Sbjct: 207 LMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAH 266

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL----GLG 418
                EA  +F KM  ++ +  +  T +SV+  C  +  F   + +H + +K        
Sbjct: 267 RGLYLEAFEMFRKMI-MSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPD 325

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
               V NAL+  Y + G+++I++ IF+ M  RD VSWN +++GY       +A     EM
Sbjct: 326 VAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEM 385

Query: 479 --QNM----------------EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
             +N+                EE     N   L       +P        +  C  L +L
Sbjct: 386 PEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGF----EPCDYAFAGAIISCSVLGSL 441

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+++HA  +R    + +  G+AL+ MYA+CG ++ A  +F  MP  + I+WN +I A 
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAAL 501

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
           G HG+G + +EL + M+ EG     + P+ ++F+ + +ACSH+G+V EG   F  M + Y
Sbjct: 502 GQHGQGTQAIELFEEMLKEG-----ILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVY 556

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
           G+ P  +HYA ++DLL RAGK  +A +++  MP E   A  W +LL  CRIH N+++G  
Sbjct: 557 GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFE-PGAPIWEALLAGCRIHGNIDLGIE 615

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AA+ LF L+P     YVLLSN+Y+ A  W+    VRK M++ GV+KEPGCSWIE  +++H
Sbjct: 616 AAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
            FL GD +H +  Q++ +LE L   MRK GYVPDT CVLH+V  + KE  L  HSEKLA+
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAV 735

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           A+G +  P G T+RV KNLR+C DCH A KF+SK+  REI++RD +RFHHF++G CSCGD
Sbjct: 736 AYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGD 795

Query: 881 YW 882
           YW
Sbjct: 796 YW 797



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/668 (21%), Positives = 269/668 (40%), Gaps = 149/668 (22%)

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE----------- 142
           SL + +HAH++  G+      + N L+++Y K     +  Y +FD I +           
Sbjct: 30  SLARPVHAHMIASGFQPRG-HILNRLIDIYSKSSKLNYARY-LFDEIPQPDIVARTTLIA 87

Query: 143 ----------------------KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
                                 +D V +N+MI           A+E F  M   N  P +
Sbjct: 88  AYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDN 147

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGR------- 232
           +T  SV  A + ++ ++  +  +Q+H   ++ G  + T ++NAL++ Y K          
Sbjct: 148 YTFTSVLGALALVAEKE--KHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSS 205

Query: 233 --VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK--------------------------- 263
             + +A+ LF    +RD +SW TI++   +N+                            
Sbjct: 206 SLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYA 265

Query: 264 ----FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN------D 313
               +LEA    R+M +  I+ D  +  SV+  C++      GKE+HAY L+       D
Sbjct: 266 HRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPD 325

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY------------- 360
           + +    V +AL+  Y  C +V+  + +F+ + ++ +  WN +++GY             
Sbjct: 326 VAMP---VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFF 382

Query: 361 ------------------GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
                              Q  + EEAL  F +M ++ G  P     +  + +C    + 
Sbjct: 383 NEMPEKNILSWIIMISGLAQIGFAEEALKFFNRM-KLQGFEPCDYAFAGAIISCSVLGSL 441

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +H   ++ G        NAL+ MY+R G ++ +  +F +M   D +SWN MI   
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAAL 501

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              GQ   A+ L  EM              L E +L   P+ I+ +TV+  C     + +
Sbjct: 502 GQHGQGTQAIELFEEM--------------LKEGIL---PDRISFLTVISACSHAGLVKE 544

Query: 523 GKEIHAYAIRNMLAT--DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           G++ +  ++ N+     D    + ++D+  + G  + A+ V + MP       W  ++  
Sbjct: 545 GRK-YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
             +HG     +E  + +        E+KP ++ T++ L    + +G  ++ M    K+  
Sbjct: 604 CRIHGNIDLGIEAAERLF-------ELKPQHDGTYVLLSNMYAVAGQWND-MAKVRKLMR 655

Query: 639 DYGIEPSP 646
           D G++  P
Sbjct: 656 DRGVKKEP 663



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 52/368 (14%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           L G+  +   +W   +   A    + EA   + +M  S IQ D F F +V+   A     
Sbjct: 246 LNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCF 305

Query: 94  SLGKQIHAHVVKYGYGLS---SVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWN 149
            LGK++HA+ +K     +   ++ V N L+  Y KCG  D+    ++F+++ E+D VSWN
Sbjct: 306 RLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI--AQEIFNKMPERDLVSWN 363

Query: 150 S-------------------------------MIATLCRFGKWDLALEAFRMMLYSNVEP 178
                                           MI+ L + G  + AL+ F  M     EP
Sbjct: 364 IILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEP 423

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             +      ++CS L     L+ GRQ+H   +R G E +    NAL+ MYA+ G VD A 
Sbjct: 424 CDYAFAGAIISCSVLG---SLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAH 480

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            LF +    D +SWN ++++L Q+ +  +A+    +M   GI PD +S  +V+ ACSH  
Sbjct: 481 CLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAG 540

Query: 298 MLDTGKEI-----HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS-DKKIA 351
           ++  G++      + Y +  D   +  +  + ++D+ C   +    + V + +  +    
Sbjct: 541 LVKEGRKYFDSMHNVYGVNPD---EEHY--ARIIDLLCRAGKFSEAKEVMESMPFEPGAP 595

Query: 352 LWNAMITG 359
           +W A++ G
Sbjct: 596 IWEALLAG 603


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 404/739 (54%), Gaps = 33/739 (4%)

Query: 60  EAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA+L +    RS   +P+ +   +V++A   + +LS   Q+H  VVK G+ +  V V  +
Sbjct: 136 EALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGF-VQDVYVGTS 194

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++ Y K G  + +   +FD +  K  V+W ++IA   + G+ +++L+ F  M   +V P
Sbjct: 195 LIDFYAKRGY-VDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYP 253

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
             + + SV  ACS L   +G   G+Q+HG  LR G + +  ++N ++  Y K  +V   +
Sbjct: 254 DRYVISSVLSACSMLEFLEG---GKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            LF    D+D+VSW T+++   QN    +A+    +M  +G KPD     SVL +C  L+
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
            L  G+++HAYA++ +I  D+ FV + L+DMY  C  +   R+VFD ++   +  +NAMI
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDD-FVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMI 429

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            GY + +   EAL LF +M  ++   P   T  S++              IH   IK G+
Sbjct: 430 EGYSRQDKLVEALDLFREMR-LSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGV 488

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D +  +AL+D+YS+   +  ++ +F+++  RD V WN M +GY+              
Sbjct: 489 SLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYS-------------- 534

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
            Q +E E++     DL  +  R KPN  T   V+     +++L  G++ H   I+  L  
Sbjct: 535 -QQLENEESLKLYKDLQMS--RLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDD 591

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           D  V ++LVDMYAKCG +  + + F     R++  WN +I  Y  HG+  + LE+ + M+
Sbjct: 592 DPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMI 651

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            EG     VKPN VTF+ L +ACSH+G++  G   F  M   +GIEP  DHYAC+V LLG
Sbjct: 652 MEG-----VKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLG 705

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAGK+ +A + +  MP +   A  W SLL ACR+  +VE+G  AA+     +P  +  Y+
Sbjct: 706 RAGKIYEAKEFVKKMPIK-PAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYI 764

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           LLSNI++S  +W     VR+KM    V KEPG SWIE  +E+H+F+A D +H+ S  +  
Sbjct: 765 LLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISL 824

Query: 778 FLENLSERMRKEGYVPDTS 796
            L+NL  +++  GYVP+ +
Sbjct: 825 VLDNLILQIKGFGYVPNAA 843



 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 194/657 (29%), Positives = 334/657 (50%), Gaps = 38/657 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K+IHAH+V  G+    V + NTL++ Y K      D  K+FD +  ++ V+W+SM++   
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQS-DAQKLFDTMPHRNLVTWSSMVSMYT 129

Query: 157 RFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
           + G    AL  F R M   + +P+ + L SV  AC+ L     L    Q+HG  ++ G  
Sbjct: 130 QHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLG---NLSQALQLHGFVVKGGFV 186

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + ++  +L+  YAK G VD+A+ +F   + +  V+W  I++  ++  +   ++    QM
Sbjct: 187 QDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM 246

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
               + PD   I+SVL ACS LE L+ GK+IH Y LR    +D S V + ++D Y  C +
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVV-NGIIDFYLKCHK 305

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           V+ GR++F+ + DK +  W  MI G  QN +  +A+ LF++M    G  P+A   +SV+ 
Sbjct: 306 VKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVR-KGWKPDAFGCTSVLN 364

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +C   +A      +H +AIK+ +  D +V+N L+DMY++   +  ++ +FD +   + VS
Sbjct: 365 SCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVS 424

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           +N MI GY+   +  +AL L REM+                  L P P  +T +++L   
Sbjct: 425 YNAMIEGYSRQDKLVEALDLFREMR----------------LSLSP-PTLLTFVSLLGLS 467

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            +L  L    +IH   I+  ++ D   GSAL+D+Y+KC C+  AR VF+ +  R+++ WN
Sbjct: 468 SSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWN 527

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +   Y    E +E L+L K++     +   +KPNE TF A+ AA S+   +  G   F+
Sbjct: 528 AMFSGYSQQLENEESLKLYKDL-----QMSRLKPNEFTFAAVIAAASNIASLRHGQQ-FH 581

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
                 G++  P     +VD+  + G +E++++  +           W+S++     H +
Sbjct: 582 NQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQR--DIACWNSMISTYAQHGD 639

Query: 695 VEIGEIAAQNLFL--LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPG 749
                   + + +  ++P+  +   LLS   S A L D      + M + G+  EPG
Sbjct: 640 AAKALEVFERMIMEGVKPNYVTFVGLLSAC-SHAGLLDLGFHHFESMSKFGI--EPG 693



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 279/558 (50%), Gaps = 30/558 (5%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           L   G + +   +W   +   A+  +   ++  + +M   D+ PD +   +VL A + ++
Sbjct: 210 LIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLE 269

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            L  GKQIH +V++ G+ +  V+V N +++ Y KC   +    K+F+R+ +KD VSW +M
Sbjct: 270 FLEGGKQIHGYVLRRGFDM-DVSVVNGIIDFYLKC-HKVKTGRKLFNRLVDKDVVSWTTM 327

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           IA   +      A++ F  M+    +P +F   SV  +C +L     L+ GRQVH  +++
Sbjct: 328 IAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ---ALQKGRQVHAYAIK 384

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           V  + + F+ N L+ MYAK   + +A+ +F      ++VS+N ++   S+ DK +EA+  
Sbjct: 385 VNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDL 444

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M L    P  ++  S+L   S L +L+   +IH   ++  + +D SF GSAL+D+Y 
Sbjct: 445 FREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLD-SFAGSALIDVYS 503

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  V   R VF+ I D+ I +WNAM +GY Q   +EE+L L+ K  +++ L PN  T +
Sbjct: 504 KCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLY-KDLQMSRLKPNEFTFA 562

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           +V+ A     +    +  H   IK+GL  D +V N+L+DMY++ G IE S   F     R
Sbjct: 563 AVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQR 622

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D   WN+MI+ Y    QHGDA   L   + M  E                KPN +T + +
Sbjct: 623 DIACWNSMISTY---AQHGDAAKALEVFERMIMEG--------------VKPNYVTFVGL 665

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR 568
           L  C     L  G   H +   +    +  +   + +V +  + G +  A+     MP++
Sbjct: 666 LSACSHAGLLDLG--FHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIK 723

Query: 569 -NVITWNVIIMAYGMHGE 585
              + W  ++ A  + G 
Sbjct: 724 PAAVVWRSLLSACRVSGH 741


>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/533 (40%), Positives = 324/533 (60%), Gaps = 30/533 (5%)

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           +WN MI GY +++   EA++L++ M       PN  T   ++ +C R  +      +H H
Sbjct: 1   MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            IK G   D +V+NAL+ +YS  G + +++T+FD+  VRD VS+NTMI GY    Q   A
Sbjct: 61  IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYA 530
           L L  EMQN +E                     +TL+ VL  C  L A   GK + H Y 
Sbjct: 121 LCLFGEMQNSDE---------------------VTLVAVLSACARLGAFDLGKRLYHQYI 159

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP--VRNVITWNVIIMAYGMHGEGQE 588
              +   + ++ +A++DMYAKCG ++ A  +F  +   ++    +N +I     HG G+ 
Sbjct: 160 ENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGET 219

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            + + + +++ G     +KP+EVTF+ +  AC HSG++ EG  LF  M + YGI+P  +H
Sbjct: 220 AITVFRELISTG-----LKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 274

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           Y C+VDLLGR G +E+AY L+  MP E +    W +LL ACR H NV+IGEIA Q L  +
Sbjct: 275 YGCMVDLLGRYGCLEEAYDLVQKMPFEANSV-IWRALLSACRTHGNVKIGEIAGQKLLEM 333

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           E    + YVLLSNI + A  W++A  VRK M++ G+RK PG S+IE G  IH+F+A D S
Sbjct: 334 EAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKS 393

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H Q +++   L++++ R++  GYVP+T+ V+ +++EEEKE+++  HSEKLA+AFG++   
Sbjct: 394 HPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCS 453

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           P  TIR+ KNLR+C DCH+A K +S+I  REI +RD  RFHHF+NG+CSC D+
Sbjct: 454 PTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDF 506



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 143/266 (53%), Gaps = 14/266 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           W   +R  +RS+  REAI+ Y+ M    I P +NF FP +L + A +  L  G ++H+H+
Sbjct: 2   WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K+G+  S + V N L+++Y   G ++     +FD    +D VS+N+MI       + + 
Sbjct: 62  IKHGFE-SDLFVRNALIHLYSVFG-NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES 119

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMN 221
           AL  F  M  S+      TLV+V  AC+ L   D   LG++++   +  G +  NT +  
Sbjct: 120 ALCLFGEMQNSD----EVTLVAVLSACARLGAFD---LGKRLYHQYIENGVFNQNTILTA 172

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           A+M MYAK G +D A  +F+      +    +N++++ L+Q+     A+   R++   G+
Sbjct: 173 AVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGL 232

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEI 305
           KPD V+   VL AC H  +++ GK++
Sbjct: 233 KPDEVTFVGVLCACGHSGLIEEGKKL 258



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 158/329 (48%), Gaps = 17/329 (5%)

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRDGLRLGRQVH 206
           WN+MI    R      A+  +  M+   + P ++FT   +  +C+ LS    L  G +VH
Sbjct: 2   WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS---SLEPGHEVH 58

Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            + ++ G E + F+ NAL+ +Y+  G ++ A+TLF     RDLVS+NT++   ++ ++  
Sbjct: 59  SHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE 118

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
            A+    +M       D V++ +VL AC+ L   D GK ++   + N +   N+ + +A+
Sbjct: 119 SALCLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAV 174

Query: 326 VDMYCNCREVECGRRVFDFISD--KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
           +DMY  C  ++    +F  +    K   ++N+MI G  Q+   E A+ +F ++    GL 
Sbjct: 175 MDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS-TGLK 233

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKT 442
           P+  T   V+ AC  S    + + +        G+         ++D+  R G +E +  
Sbjct: 234 PDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYD 293

Query: 443 IFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           +   M    ++V W  +++    C  HG+
Sbjct: 294 LVQKMPFEANSVIWRALLSA---CRTHGN 319


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 408/748 (54%), Gaps = 37/748 (4%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + EA+L   EM R +++P++    A+L A  G  +L LG+ +H + ++ G   S+  VA 
Sbjct: 135 YEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVAT 194

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            L+  Y +   DM  +  +FD +  ++ VSWN+MI+     G +  ALE F  ML   V+
Sbjct: 195 ALIGFYLRF--DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK 252

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDD 235
               T++    AC+ L     L+LG+Q+H  +++  E+  + +I+NAL+ MY+  G ++ 
Sbjct: 253 FDCVTMLVAVQACAELG---SLKLGKQIHQLAIKF-EFVEDLYILNALLNMYSNNGSLES 308

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           +  LF+S  +RD   WN+++S+ +      EA+    +M   G+K D  ++  +L  C  
Sbjct: 309 SHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 368

Query: 296 LEM-LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           L   L  GK +HA+ +++ + ID S +G+AL+ MY     VE  +++FD +    I  WN
Sbjct: 369 LASGLLKGKSLHAHVIKSGMRIDAS-LGNALLSMYTELNCVESVQKIFDRMKGVDIISWN 427

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI    +N    +A  LF +M E + + PN+ T+ S++ AC           IHG+ +K
Sbjct: 428 TMILALARNTLRAQACELFERMRE-SEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK 486

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
             +  ++ ++ AL DMY   G    ++ +F+    RD +SWN MI  Y    Q   AL+L
Sbjct: 487 HSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLL 546

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN- 533
              M                  +   +PNS+T++ VL     L+ L +G+ +HAY  R  
Sbjct: 547 FHRM------------------ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRG 588

Query: 534 -MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             L  D+ + +A + MYA+CG L  A  +F  +P RN+I+WN +I  YGM+G G + +  
Sbjct: 589 FSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLA 648

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M+ +G R     PN VTF+++ +ACSHSG +  G+ LF+ M  D+ + P   HY+C+
Sbjct: 649 FSQMLEDGFR-----PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCI 703

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VDLL R G +++A + I+ MP E D A  W +LL +CR + + +  +   + L  LEP  
Sbjct: 704 VDLLARGGCIDEAREFIDSMPIEPD-ASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMN 762

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           A +YVLLSN+Y++A LW +   +R  +KE G+RK PG SWI   +++H F AGD SH QS
Sbjct: 763 AGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQS 822

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLH 800
           ++++  L  L   MR+ GY PD   V H
Sbjct: 823 DKIYAKLSILLSSMRETGYDPDLRWVFH 850



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 182/641 (28%), Positives = 315/641 (49%), Gaps = 37/641 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q +  + W   ++ +A     +  + +Y +M    + P+N   P VLKA A    +  GK
Sbjct: 14  QIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 73

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            IH  +      +  V V   +V+ Y KCG  + D   VFD ++++D V WN+M+     
Sbjct: 74  SIHRSIQGTDL-MDDVRVGTAVVDFYCKCGF-VEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-- 215
           +G ++ A+   R M   N+ P+S T+V++ LAC   S    LRLGR VHG  LR G +  
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASE---LRLGRGVHGYCLRNGMFDS 188

Query: 216 NTFIMNALMAMYAKLG-RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           N  +  AL+  Y +   RV     LF     R++VSWN ++S       + +A+    QM
Sbjct: 189 NPHVATALIGFYLRFDMRV--LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            +  +K D V++   + AC+ L  L  GK+IH  A++ +  +++ ++ +AL++MY N   
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFE-FVEDLYILNALLNMYSNNGS 305

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E   ++F+ + ++   LWN+MI+ Y      EEA+ LFI+M+   G+  +  T+  ++ 
Sbjct: 306 LESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQS-EGVKKDERTVVIMLS 364

Query: 395 ACVR-SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            C   +      + +H H IK G+  D  + NAL+ MY+ +  +E  + IFD M+  D +
Sbjct: 365 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 424

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWNTMI           A  L   M+  E                  KPNS T++++L  
Sbjct: 425 SWNTMILALARNTLRAQACELFERMRESE-----------------IKPNSYTIISILAA 467

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  ++ L  G+ IH Y +++ +  +  + +AL DMY  CG    AR +F+  P R++I+W
Sbjct: 468 CEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISW 527

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I +Y  + +  + L L   M++E       +PN VT I + ++ +H   + +G  L 
Sbjct: 528 NAMIASYVKNNQAHKALLLFHRMISEA------EPNSVTIINVLSSFTHLATLPQGQSLH 581

Query: 634 -YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
            Y  +  + +          + +  R G ++ A  +   +P
Sbjct: 582 AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/545 (30%), Positives = 258/545 (47%), Gaps = 46/545 (8%)

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS--NLSRR 196
           +I  KD   WNS+I            L A+  M    V P++ TL  V  AC+  N   R
Sbjct: 12  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71

Query: 197 DGLRLGRQVHGNSL----RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
            G  + R + G  L    RVG        A++  Y K G V+DA+ +F +  DRD+V WN
Sbjct: 72  -GKSIHRSIQGTDLMDDVRVG-------TAVVDFYCKCGFVEDARCVFDAMSDRDVVLWN 123

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            +V        + EA++ +R+M    ++P+  ++ ++L AC     L  G+ +H Y LRN
Sbjct: 124 AMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRN 183

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            +   N  V +AL+  Y    ++     +FD +  + I  WNAMI+GY       +AL L
Sbjct: 184 GMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALEL 242

Query: 373 FIKM--EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           F++M  +EV     +  TM   V AC    +    + IH  AIK     D Y+ NAL++M
Sbjct: 243 FVQMLVDEVKF---DCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNM 299

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           YS  G +E S  +F+ +  RD   WN+MI+ Y   G H +A+ L   MQ+   +K+    
Sbjct: 300 YSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER-- 357

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                          T++ +L  C  L S L KGK +HA+ I++ +  D  +G+AL+ MY
Sbjct: 358 ---------------TVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMY 402

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
            +  C+   +++FD M   ++I+WN +I+A   +    +  EL + M     R  E+KPN
Sbjct: 403 TELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM-----RESEIKPN 457

Query: 610 EVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
             T I++ AAC     +  G  +  Y MK  + IE +      + D+    G    A  L
Sbjct: 458 SYTIISILAACEDVTCLDFGRSIHGYVMK--HSIEINQPLRTALADMYMNCGDEATARDL 515

Query: 669 INMMP 673
               P
Sbjct: 516 FEGCP 520



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 25/187 (13%)

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
           + R+ +S T    ++++D   WN++I                +   N++ ++   + Y  
Sbjct: 3   LQRLTLSPT---KIQIKDPKHWNSVI----------------KHQANLKNDQAILSAYTQ 43

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            E+ L   PN+ TL  VL  C A +A+ +GK IH       L  DV VG+A+VD Y KCG
Sbjct: 44  MES-LGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCG 102

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  AR VFD M  R+V+ WN ++  Y   G  +E + L++ M  E      ++PN  T 
Sbjct: 103 FVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGREN-----LRPNSRTM 157

Query: 614 IALFAAC 620
           +AL  AC
Sbjct: 158 VALLLAC 164


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/767 (32%), Positives = 418/767 (54%), Gaps = 32/767 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQ--PDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           W   L   + SN+    ++    M  S  +  P++     VL   A + DL  GK +H +
Sbjct: 112 WNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGY 171

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V+K G+   ++   N LV+MY KCG    D Y VFD I  KD VSWN+MIA L      +
Sbjct: 172 VIKSGFDQDTLG-GNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVE 230

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIM 220
            A   F  M+     P+  T+ ++   C++  +      GRQ+H   L+  E   +  + 
Sbjct: 231 DAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVC 290

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGI 279
           NAL+++Y K+G++ +A+ LF + + RDLV+WN  ++  + N ++L+A+     +A L  +
Sbjct: 291 NALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETL 350

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            PD V++ S+LPAC+ L+ L  GK+IHAY  R+  L  ++ VG+ALV  Y  C   E   
Sbjct: 351 LPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAY 410

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             F  IS K +  WN++   +G+  +    L L   M ++  + P++ T+ +++  C   
Sbjct: 411 HTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLR-IRPDSVTILAIIRLCASL 469

Query: 400 EAFPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSW 455
                 + IH ++I+ G         V NA++D YS+ G +E +  +F ++ E R+ V+ 
Sbjct: 470 LRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTC 529

Query: 456 NTMITGYTICGQHGDALMLLREMQ--NMEEEKNRNNVY---DLDETVLR---------PK 501
           N++I+GY   G H DA M+   M   ++        VY   D  E  L           K
Sbjct: 530 NSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMK 589

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+++T+M++LP C  ++++    +   Y IR+    D+ + +AL+D YAKCG +  A ++
Sbjct: 590 PDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCF-KDLHLEAALLDAYAKCGIIGRAYKI 648

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F L   ++++ +  +I  Y MHG  +E L +  +M+  G     ++P+ + F ++ +ACS
Sbjct: 649 FQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLG-----IQPDHIIFTSILSACS 703

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G V EG+ +FY ++  +G++P+ + YACVVDLL R G++ +AY L+  +P E + A  
Sbjct: 704 HAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEAN-ANL 762

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W +LLGAC+ H  VE+G I A  LF +E +   +Y++LSN+Y++   WD  M+VR+ M+ 
Sbjct: 763 WGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRN 822

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
             ++K  GCSWIE     + F+AGD SH Q   ++  L+ L  ++++
Sbjct: 823 KDLKKPAGCSWIEVERTNNIFVAGDCSHPQRSIIYSTLQTLDRQVKE 869



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 315/636 (49%), Gaps = 72/636 (11%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
            +PD+    A+LK+ + +   +LG+ +H +VVK G+G   VT    L+NMY KCG  + +
Sbjct: 39  FKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVT-NKGLLNMYAKCGM-LVE 96

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDL-ALEAFRMMLYSNVE--PSSFTLVSVALA 189
             K+FD+++  D V WN +++      K D   +  FRMM +S+ E  P+S T+ +V   
Sbjct: 97  CLKLFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMM-HSSREALPNSVTVATVLPV 155

Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD-DAKTLFKSFEDRD 247
           C+ L   D    G+ VHG  ++ G + +T   NAL++MYAK G V  DA  +F +   +D
Sbjct: 156 CARLGDLDA---GKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKD 212

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE---MLDTGKE 304
           +VSWN +++ L++N    +A +    M     +P+  ++A++LP C+  +       G++
Sbjct: 213 VVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQ 272

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IH+Y L+   L  +  V +AL+ +Y    ++     +F  +  + +  WNA I GY  N 
Sbjct: 273 IHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNG 332

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG-LGRDRYV 423
              +AL LF  +  +  L P++ TM S++PAC + +     + IH +  +   L  D  V
Sbjct: 333 EWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAV 392

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NAL+  Y++ G  E +   F  + ++D +SWN++   +     H   L LL  M     
Sbjct: 393 GNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLK--- 449

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN---MLATDVV 540
                         LR +P+S+T++ ++  C +L  + K KEIH+Y+IR    +  T   
Sbjct: 450 --------------LRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPT 495

Query: 541 VGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMAY---GMHGEGQEVLE----- 591
           VG+A++D Y+KCG + +A ++F +L   RN++T N +I  Y   G H +   +       
Sbjct: 496 VGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSET 555

Query: 592 ------LLKNMVAEG--------------SRGGEVKPNEVTFIALFAACSHSGMV----- 626
                 L+  + AE               +RG  +KP+ VT ++L   C+    V     
Sbjct: 556 DLTTWNLMVRVYAENDCPEQALGLCHELQARG--MKPDTVTIMSLLPVCTQMASVHLLSQ 613

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
            +G  +    KD +      D YA    ++GRA K+
Sbjct: 614 CQGYIIRSCFKDLHLEAALLDAYA-KCGIIGRAYKI 648



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/490 (32%), Positives = 253/490 (51%), Gaps = 37/490 (7%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMML--YSNVEPSSFTLVSVALACSNLSRRDGLR 200
           +D  +W S+I +LC   K   AL  F   L  +   +P    L ++  +CS L   +   
Sbjct: 4   RDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN--- 60

Query: 201 LGRQVHGNSLRVGEWNTFIMN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           LGR +HG  ++ G  +  + N  L+ MYAK G + +   LF      D V WN ++S  S
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 260 QNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            ++K    VM + +M  + R   P+ V++A+VLP C+ L  LD GK +H Y +++    D
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQD 180

Query: 318 NSFVGSALVDMYCNCREVEC-GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            +  G+ALV MY  C  V      VFD I+ K +  WNAMI G  +N   E+A +LF  M
Sbjct: 181 -TLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSM 239

Query: 377 EEVAGLWPNATTMSSVVPACV---RSEAFPDKEGIHGHAIKLG-LGRDRYVQNALMDMYS 432
            +     PN  T+++++P C    +S A+     IH + ++   L  D  V NAL+ +Y 
Sbjct: 240 VK-GPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYL 298

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           ++G++  ++ +F  M+ RD V+WN  I GYT  G+   AL L   + ++           
Sbjct: 299 KVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASL----------- 347

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN-MLATDVVVGSALVDMYAK 551
             ET+L   P+S+T++++LP C  L  L  GK+IHAY  R+  L  D  VG+ALV  YAK
Sbjct: 348 --ETLL---PDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAK 402

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG    A   F ++ ++++I+WN I  A+G        L LL  M+        ++P+ V
Sbjct: 403 CGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKL-----RIRPDSV 457

Query: 612 TFIALFAACS 621
           T +A+   C+
Sbjct: 458 TILAIIRLCA 467



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 34/290 (11%)

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD  +W ++I    +  +H +AL L        E                 KP+   L  
Sbjct: 4   RDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAF---------------KPDHTVLAA 48

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +L  C AL A   G+ +H Y ++    +  V    L++MYAKCG L    ++FD +   +
Sbjct: 49  ILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCD 108

Query: 570 VITWNVIIMAY-GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
            + WN+++  + G +    +V+ + + M    SR  E  PN VT   +   C+  G +  
Sbjct: 109 PVVWNIVLSGFSGSNKCDADVMRVFRMM--HSSR--EALPNSVTVATVLPVCARLGDLDA 164

Query: 629 GMDLFYKMKDDYGIEPSPDHYA----CVVDLLGRAGKV-EDAYQLINMMPPEFDKAGAWS 683
           G     K    Y I+   D        +V +  + G V  DAY + + +   +    +W+
Sbjct: 165 G-----KCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIA--YKDVVSWN 217

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
           +++     ++ VE   +   +  +++     +Y  ++NI      +DK++
Sbjct: 218 AMIAGLAENRLVEDAFLLFSS--MVKGPTRPNYATVANILPVCASFDKSV 265


>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
          Length = 660

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 365/644 (56%), Gaps = 47/644 (7%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N +V +L  + +   A   L+ +      P   +  SVL A +          +H     
Sbjct: 51  NHLVQTLCASGRLARAAALLQGLP----APTQRTYKSVLLAAARAGDAALAAAVHRRLKA 106

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           + +   + F+ + L+D Y +  E+   R+VFD    K I +WNA++      ++ EEAL 
Sbjct: 107 DPVFRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALA 166

Query: 372 LFIKMEEVA----------GLWPNATTMSSVVPAC--VRSEAFPDKEGIHGHAIKLGLGR 419
               M  +           GL       +S VPA   VR         IH HA++ G G 
Sbjct: 167 RLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVRE--------IHAHAVRRGYGL 218

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
             +V   L+D Y+++G +  ++++F  M  R+ VSW  MI  Y    + GDA++L +EM 
Sbjct: 219 HTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMV 278

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
             +E        DL        PNS+T++ +L     ++AL +GK +HAY +R    + V
Sbjct: 279 ASDE--------DL-------VPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLV 323

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
            V +AL+ MY KCGCL   R +FDL+  R +V++WN +I  YGMHG G E +++ ++M  
Sbjct: 324 SVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQ 383

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     V PN +TFI++  ACSH+G+V EG  LF  M D Y + P  +HYAC+VDLLGR
Sbjct: 384 MG-----VSPNIITFISVLGACSHAGLVDEGKRLFESMVD-YNVTPRAEHYACMVDLLGR 437

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG +++A +LI  M         W SLLGACRIH++VE  E+A   LF LEP  A +YVL
Sbjct: 438 AGHLDEAVELIQGMHIR-PSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVL 496

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           L++IY+ A+L  +   ++  ++E  + K PGCSWIE    +H F++ D  + Q E+L   
Sbjct: 497 LADIYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQAL 556

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           +     +M+ +GYVPDT  VL+++ EEEKE +L GHSEKLA+AFG++NT  G  IR+ KN
Sbjct: 557 IGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKN 616

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LR+C DCH  TKFISK   REII+RDV RFHHF++G CSCGDYW
Sbjct: 617 LRLCEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 660



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 192/399 (48%), Gaps = 15/399 (3%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           ++  L++ Y   G ++    +VFD    K    WN+++  L      + AL     M   
Sbjct: 116 LSTRLIDAYASLG-ELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMGRL 174

Query: 175 NVEPSSFTLVSVALAC--SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLG 231
            V   S++      AC  ++ S      L R++H +++R G   +T +   L+  YAKLG
Sbjct: 175 RVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLG 234

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL--RGIKPDGVSIASV 289
            V  A+++F +  +R++VSW  ++   ++N++  +A++  ++M      + P+ V+I  +
Sbjct: 235 IVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCI 294

Query: 290 LPACSHLEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           L A + +  L  GK +HAY LR   D L+    V +AL+ MY  C  +E GR +FD I  
Sbjct: 295 LHAFAGVNALGQGKLLHAYILRRGFDSLVS---VLNALMAMYMKCGCLEAGRHIFDLIGH 351

Query: 348 KK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K +  WN +I+GYG + +  EA+ +F  M ++ G+ PN  T  SV+ AC  +    + +
Sbjct: 352 RKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQM-GVSPNIITFISVLGACSHAGLVDEGK 410

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTIC 465
            +    +   +         ++D+  R G ++ +  +   M +R +   W +++    I 
Sbjct: 411 RLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIH 470

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
                A M   ++ ++ E +N  N   L +   R K +S
Sbjct: 471 RHVEYAEMACSQLFDL-EPRNAGNYVLLADIYARAKLHS 508



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 171/376 (45%), Gaps = 26/376 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+   L+  YA LG +  A+ +F     + +  WN ++ +L+  D   EA+  L  M 
Sbjct: 113 DPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMG 172

Query: 276 LRGIKPDGVSIASVLPAC-----SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              +  D  S A  L AC     SH+      +EIHA+A+R    + ++ V + L+D Y 
Sbjct: 173 RLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGL-HTHVATTLIDCYA 231

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTM 389
               V     VF  + ++ +  W AMI  Y +NE   +A++LF +M      L PN+ T+
Sbjct: 232 KLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTI 291

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
             ++ A     A    + +H + ++ G      V NALM MY + G +E  + IFD +  
Sbjct: 292 VCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGH 351

Query: 450 R-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
           R D VSWNT+I+GY + G   +A+ +  +M  M                    PN IT +
Sbjct: 352 RKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMG-----------------VSPNIITFI 394

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +VL  C     + +GK +    +   +       + +VD+  + G L+ A  +   M +R
Sbjct: 395 SVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIR 454

Query: 569 -NVITWNVIIMAYGMH 583
            +   W  ++ A  +H
Sbjct: 455 PSPQVWGSLLGACRIH 470



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 136/255 (53%), Gaps = 14/255 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKA-----VAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           EA+    +M R  +  D++++   LKA      + +   +L ++IHAH V+ GYGL +  
Sbjct: 163 EALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHT-H 221

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           VA TL++ Y K G   +    VF  + E++ VSW +MI    +  +   A+  F+ M+ S
Sbjct: 222 VATTLIDCYAKLGIVSY-AESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVAS 280

Query: 175 NVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
           + +  P+S T+V +  A + +   + L  G+ +H   LR G +    ++NALMAMY K G
Sbjct: 281 DEDLVPNSVTIVCILHAFAGV---NALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCG 337

Query: 232 RVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
            ++  + +F     R D+VSWNT++S    +    EAV     M   G+ P+ ++  SVL
Sbjct: 338 CLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVL 397

Query: 291 PACSHLEMLDTGKEI 305
            ACSH  ++D GK +
Sbjct: 398 GACSHAGLVDEGKRL 412



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 49/257 (19%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRS--DIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW   +   A++ +  +AIL + EM  S  D+ P++     +L A AG+  L  GK +HA
Sbjct: 253 SWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHA 312

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGK 160
           ++++ G+  S V+V N L+ MY KCG  +     +FD I   KD VSWN++I+     G 
Sbjct: 313 YILRRGFD-SLVSVLNALMAMYMKCGC-LEAGRHIFDLIGHRKDVVSWNTLISGYGMHGF 370

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM 220
              A++ F  M    V P+  T +SV  ACS+                            
Sbjct: 371 GHEAVQVFEDMTQMGVSPNIITFISVLGACSH---------------------------- 402

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVS----WNTIVSSLSQNDKFLEAVMFLRQMAL 276
                     G VD+ K LF+S  D ++      +  +V  L +     EAV  ++ M +
Sbjct: 403 ---------AGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHI 453

Query: 277 RGIKPDGVSIASVLPAC 293
           R   P      S+L AC
Sbjct: 454 R---PSPQVWGSLLGAC 467


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/696 (34%), Positives = 381/696 (54%), Gaps = 32/696 (4%)

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +  + +  L   + +H + L+ G   +F  + L+  Y K   + +A+ LF    +R +V+
Sbjct: 9   AQFTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVT 68

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+++SS     K  EA+     M   G+ PD  + +++  A S + +   G++ H  A+
Sbjct: 69  WNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAV 128

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
                + + FV + +VDMY    +++  R VFD + DK + L+ A+I GY Q   D EAL
Sbjct: 129 VLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEAL 188

Query: 371 MLFIKMEEVAG--LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
            +F   E++ G  + PN  T++SV+ +C       + + IHG  +K GL      Q +L+
Sbjct: 189 EVF---EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLL 245

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
            MYS+   +E S  +F+ +     V+W + I G    G+   AL + REM          
Sbjct: 246 TMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS------ 299

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                        PN  T  ++L  C +L+ L  G++IHA  ++  +  +  V +AL+ +
Sbjct: 300 -----------ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHL 348

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y KCG +  AR VF+ +   +V++ N +I AY  +G G E LEL + M   G      KP
Sbjct: 349 YGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGH-----KP 403

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           N VTFI++  AC+++G+V EG  +F  +++++ IE + DHY C++DLLGRA + E+A  L
Sbjct: 404 NVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAML 463

Query: 669 INM-MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           I     P+  +   W +LL AC+IH  VE+ E   + +    P     ++LL+NIY+SA 
Sbjct: 464 IEEGKNPDVIQ---WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAG 520

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
            WD  ++++   +++ ++K P  SW++   E+H F+AGD SH ++ ++   L  L E++ 
Sbjct: 521 KWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVI 580

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT-PPGTTIRVAKNLRVCNDCH 846
             GY PDT  VL ++ EE+K + L  HSEKLAIAF +  T    T IR+ KNLRVC DCH
Sbjct: 581 TLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCH 640

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
              KF+S +  R+II RD +RFHHFK G CSC DYW
Sbjct: 641 SWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 261/531 (49%), Gaps = 34/531 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           + +++      + L+  K +H H++K G   S     + L++ Y KC S + +  K+FD 
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFS--FFGHKLIDGYIKC-SVITEARKLFDE 60

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +  +  V+WNSMI++    GK   A+E +  ML+  V P ++T  ++  A S +      
Sbjct: 61  MPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVS--- 117

Query: 200 RLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           R G++ HG ++ +G    + F+   ++ MYAK G++ DA+ +F    D+D+V +  ++  
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            +Q     EA+     M    IKP+  ++ASVL +C +L  L  GK IH   +++ +   
Sbjct: 178 YNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGL--- 234

Query: 318 NSFVGS--ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            S V S  +L+ MY  C  VE   +VF+ ++      W + I G  QN  +E AL +F +
Sbjct: 235 ESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFRE 294

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M   + + PN  T SS++ AC         E IH   +KLG+  ++YV  AL+ +Y + G
Sbjct: 295 MIRCS-ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCG 353

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E ++++F+ +   D VS NTMI  Y   G   +AL L   M+                
Sbjct: 354 NVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKK--------------- 398

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCG 553
             L  KPN +T +++L  C     + +G +I +  IRN  + ++     + ++D+  +  
Sbjct: 399 --LGHKPNVVTFISILLACNNAGLVEEGCQIFSL-IRNNHSIELTRDHYTCMIDLLGRAK 455

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
               A  + +     +VI W  ++ A  +HGE +   + +K M+ +  R G
Sbjct: 456 RFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG 506



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 233/454 (51%), Gaps = 25/454 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S     + +EAI  Y  M    + PD + F A+ KA + +     G++ H   
Sbjct: 68  TWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLA 127

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+ +S   VA  +V+MY K G  M D   VFDR+ +KD V + ++I    + G    
Sbjct: 128 VVLGFEVSDGFVATGIVDMYAKFGK-MKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGE 186

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F  M+ S ++P+ +TL SV ++C NL     L  G+ +HG  ++ G E       +
Sbjct: 187 ALEVFEDMVGSRIKPNEYTLASVLVSCGNLG---DLVNGKLIHGLVVKSGLESVVASQTS 243

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K   V+D+  +F S      V+W + +  L QN +   A+   R+M    I P+
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPN 303

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRRV 341
             + +S+L ACS L ML+ G++IHA  ++  + +D N +V +AL+ +Y  C  VE  R V
Sbjct: 304 HFTFSSILHACSSLAMLEAGEQIHAVTVK--LGVDGNKYVDAALIHLYGKCGNVEKARSV 361

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+ +++  +   N MI  Y QN +  EAL LF +M+++ G  PN  T  S++ AC  + A
Sbjct: 362 FESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKL-GHKPNVVTFISILLAC--NNA 418

Query: 402 FPDKEGI-------HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
              +EG        + H+I+  L RD Y    ++D+  R  R E +  + ++ +  D + 
Sbjct: 419 GLVEEGCQIFSLIRNNHSIE--LTRDHY--TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQ 474

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           W T++     C  HG+  M  + M+ M ++  R+
Sbjct: 475 WRTLLNA---CKIHGEVEMAEKFMKKMLDQAPRD 505



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 176/351 (50%), Gaps = 25/351 (7%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT- 118
           EA+  + +M  S I+P+ +   +VL +   + DL  GK IH  VVK G  L SV  + T 
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSG--LESVVASQTS 243

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L+ MY KC   + D  KVF+ +     V+W S I  L + G+ ++AL  FR M+  ++ P
Sbjct: 244 LLTMYSKCNM-VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISP 302

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           + FT  S+  ACS+L+    L  G Q+H  ++++G + N ++  AL+ +Y K G V+ A+
Sbjct: 303 NHFTFSSILHACSSLAM---LEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
           ++F+S  + D+VS NT++ + +QN    EA+    +M   G KP+ V+  S+L AC++  
Sbjct: 360 SVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAG 419

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
           +++ G +I +    N  +       + ++D+    +  E    + +   +  +  W  ++
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLL 479

Query: 358 TG---YGQNEYDEEAL--------------MLFIKMEEVAGLWPNATTMSS 391
                +G+ E  E+ +              +L   +   AG W N   M S
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKS 530


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/564 (41%), Positives = 329/564 (58%), Gaps = 29/564 (5%)

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           + LV MY  C  ++  R +F+ I ++ +  W+AMI  Y  +   +EAL+LF +M     +
Sbjct: 24  NGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRV 83

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG--LGRDRYVQNALMDMYSRMGRIEIS 440
            PNA T + V  AC   E       IH  A+  G     +  ++NAL++MY R G +E +
Sbjct: 84  EPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEA 143

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD M+  D  SW +MIT  T   +  +AL L   M N+E                  
Sbjct: 144 RKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM-NLEG----------------I 186

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            P S+TL +VL  C    AL  GK+IH+    +   + V+  +AL+DMYAKCG L  + +
Sbjct: 187 PPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSK 246

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF  M  RN ++W  +I A   HG+G E LEL K M  EG     +  +  TFI +  AC
Sbjct: 247 VFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEG-----MVADATTFICVLRAC 301

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--PEFDK 678
           SH+G++ E ++ F+ M +DY I P+  HY   +D +GRAG+++DA +LI+ MP  PE   
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPE--- 358

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
              W +LL ACRIH   E     A+ L  L P+ +  Y LL N+Y++   +   M VRK 
Sbjct: 359 TLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKG 418

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
           M + G++K PG S+IE  +++H+F+AGD +H   +++   LE L  RMR+ GYVP+T  V
Sbjct: 419 MTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDV 478

Query: 799 LHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESR 858
           LH VNEEEKE L+  HSEKLAIAFG++ TPPGT + + KNLRVC+DCH ATK I+KI  R
Sbjct: 479 LHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRR 538

Query: 859 EIILRDVRRFHHFKNGTCSCGDYW 882
            I++RD  RFHHF++G CSC DYW
Sbjct: 539 RIVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 13/378 (3%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G++IH+ +   G+  +++   N LV+MY KCG  + +   +F+ I E+  VSW++MI   
Sbjct: 4   GRRIHSRLSLCGFHRATI-AQNGLVSMYAKCGC-LDEARAIFNGILERTVVSWSAMIGAY 61

Query: 156 CRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
              G+   AL  F RM     VEP++ T   V  AC  +   + L  GR++H  ++  GE
Sbjct: 62  ALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVI---EDLEQGREIHALAMASGE 118

Query: 215 W---NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
               N  + NAL+ MY + G +++A+ +F + +  D  SW +++++ ++N + LEA+   
Sbjct: 119 LKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELF 178

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M L GI P  V++ASVL AC+    L  GK+IH+  L       +    +AL+DMY  
Sbjct: 179 HRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSR-LDASGFHSSVLAQTALLDMYAK 237

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  +EC  +VF  +  +    W AMI    Q+   +EAL LF +M  + G+  +ATT   
Sbjct: 238 CGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEM-NLEGMVADATTFIC 296

Query: 392 VVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           V+ AC  +    +  E  H       +          +D   R GR++ ++ +   M   
Sbjct: 297 VLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFH 356

Query: 451 -DTVSWNTMITGYTICGQ 467
            +T++W T++    I  Q
Sbjct: 357 PETLTWKTLLNACRIHSQ 374



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 13/268 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW   + + A   + +EA+L +  M R+D  ++P+   F  V  A   I+DL  G++IHA
Sbjct: 53  SWSAMIGAYALHGRGQEALLLFHRM-RNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHA 111

Query: 102 HVVKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
             +  G   SS   + N L+NMY +CGS + +  KVFD +   D  SW SMI       +
Sbjct: 112 LAMASGELKSSNAILENALLNMYVRCGS-LEEARKVFDTMDHPDAFSWTSMITACTENCE 170

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSV--ALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
              ALE F  M    + P+S TL SV  A ACS       L++G+Q+H      G  ++ 
Sbjct: 171 LLEALELFHRMNLEGIPPTSVTLASVLNACACSG-----ALKVGKQIHSRLDASGFHSSV 225

Query: 219 I-MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           +   AL+ MYAK G ++ +  +F + E R+ VSW  ++++L+Q+ +  EA+   ++M L 
Sbjct: 226 LAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLE 285

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
           G+  D  +   VL ACSH  ++    E 
Sbjct: 286 GMVADATTFICVLRACSHAGLIKESLEF 313



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 26/287 (9%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH      G  R    QN L+ MY++ G ++ ++ IF+ +  R  VSW+ MI  Y + G+
Sbjct: 7   IHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGR 66

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL+L   M+N                  R +PN++T   V   CG +  L +G+EIH
Sbjct: 67  GQEALLLFHRMRNDG----------------RVEPNAMTFTGVFNACGVIEDLEQGREIH 110

Query: 528 AYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           A A+ +  + +++ ++ +AL++MY +CG L  AR+VFD M   +  +W  +I A   + E
Sbjct: 111 ALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCE 170

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             E LEL   M  EG     + P  VT  ++  AC+ SG +  G  +  ++ D  G   S
Sbjct: 171 LLEALELFHRMNLEG-----IPPTSVTLASVLNACACSGALKVGKQIHSRL-DASGFHSS 224

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
                 ++D+  + G +E + ++   M  E   + +W++++ A   H
Sbjct: 225 VLAQTALLDMYAKCGSLECSSKVFTAM--ETRNSVSWTAMIAALAQH 269



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 19/186 (10%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           + +G+ IH+           +  + LV MYAKCGCL+ AR +F+ +  R V++W+ +I A
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY----- 634
           Y +HG GQE L L   M       G V+PN +TF  +F AC     + +G ++       
Sbjct: 61  YALHGRGQEALLLFHRM----RNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS 116

Query: 635 -KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
            ++K    I  +      ++++  R G +E+A ++ + M  +   A +W+S++ AC   +
Sbjct: 117 GELKSSNAILENA-----LLNMYVRCGSLEEARKVFDTM--DHPDAFSWTSMITACT--E 167

Query: 694 NVEIGE 699
           N E+ E
Sbjct: 168 NCELLE 173



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 9/237 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +   + +  EA+  +  M    I P +    +VL A A    L +GKQIH+ +
Sbjct: 157 SWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRL 216

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G+  SSV     L++MY KCGS +    KVF  +  ++ VSW +MIA L + G+ D 
Sbjct: 217 DASGFH-SSVLAQTALLDMYAKCGS-LECSSKVFTAMETRNSVSWTAMIAALAQHGQGDE 274

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMNA 222
           ALE F+ M    +   + T + V  ACS+    ++ L     +      +    T    A
Sbjct: 275 ALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSM-VEDYAIAPTETHYCRA 333

Query: 223 LMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSL---SQNDKFLEAVMFLRQMA 275
           L  +  + GR+ DA+ L  S     + ++W T++++    SQ ++  +    L ++A
Sbjct: 334 LDTI-GRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLA 389


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/706 (35%), Positives = 381/706 (53%), Gaps = 62/706 (8%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           R+ + N F  N L+  Y+K G + + ++ F+   DRD V+WN ++   S +     AV  
Sbjct: 66  RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125

Query: 271 LRQMALRGIKPD--GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALV 326
              M +R    +   V++ ++L   S    +  GK+IH   ++   L   S+  VGS L+
Sbjct: 126 YNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK---LGFESYLLVGSPLL 181

Query: 327 DMYCNCREVECGRRVFDFISDKKIAL------------------------------WNAM 356
            MY N   +   ++VF  + D+   +                              W AM
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAM 241

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           I G  QN   +EA+  F +M+ V GL  +     SV+PAC    A  + + IH   I+  
Sbjct: 242 IKGLAQNGLAKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                YV +AL+DMY +   +  +KT+FD M+ ++ VSW  M+ GY   G+  +A+ +  
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           +MQ       R+ +           P+  TL   +  C  +S+L +G + H  AI + L 
Sbjct: 361 DMQ-------RSGI----------DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
             V V ++LV +Y KCG ++ + R+F+ M VR+ ++W  ++ AY   G   E ++L   M
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           V  G     +KP+ VT   + +ACS +G+V +G   F  M  +YGI PS  HY+C++DL 
Sbjct: 464 VQHG-----LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
            R+G++E+A + IN MP   D  G W++LL ACR   N+EIG+ AA++L  L+P   + Y
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIG-WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
            LLS+IY+S   WD    +R+ M+E  V+KEPG SWI++  ++H F A D S    +Q++
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
             LE L+ ++   GY PDTS V H+V E  K  +L  HSE+LAIAFG++  P G  IRV 
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVG 697

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLRVC DCH ATK IS +  REI++RD  RFH FK+GTCSCGD+W
Sbjct: 698 KNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 193/434 (44%), Gaps = 61/434 (14%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K IH   +R  +    +F+ + +V  Y   +     RRVFD I    +  WN ++  Y +
Sbjct: 26  KMIHGNIIRA-LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84

Query: 363 NEYDEEALMLFIKMEEVAGLWPN----ATTMSSVVPACVRSE------------------ 400
                E    F K+ +  G+  N      ++S +V A V++                   
Sbjct: 85  AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144

Query: 401 --AFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
                   G       IHG  IKLG      V + L+ MY+ +G I  +K +F  ++ R+
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQN-------MEEEKNRNNVYDLDETVLRP---- 500
           TV +N+++ G   CG   DAL L R M+        M +   +N +        R     
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264

Query: 501 --KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             K +     +VLP CG L A+ +GK+IHA  IR      + VGSAL+DMY KC CL++A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           + VFD M  +NV++W  +++ YG  G  +E +++  +M   G     + P+  T     +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-----IDPDHYTLGQAIS 379

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV----VDLLGRAGKVEDAYQLINMMPP 674
           AC++   + EG     K      I     HY  V    V L G+ G ++D+ +L N M  
Sbjct: 380 ACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-- 432

Query: 675 EFDKAGAWSSLLGA 688
               A +W++++ A
Sbjct: 433 NVRDAVSWTAMVSA 446



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 194/415 (46%), Gaps = 48/415 (11%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF----D 138
           +LK  +    +SLGKQIH  V+K G+  S + V + L+ MY   G  + D  KVF    D
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVGSPLLYMYANVGC-ISDAKKVFYGLDD 202

Query: 139 RIT--------------------------EKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           R T                          EKD VSW +MI  L + G    A+E FR M 
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              ++   +   SV  AC  L     +  G+Q+H   +R   + + ++ +AL+ MY K  
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLG---AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            +  AKT+F   + +++VSW  +V    Q  +  EAV     M   GI PD  ++   + 
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           AC+++  L+ G + H  A+ +  LI    V ++LV +Y  C +++   R+F+ ++ +   
Sbjct: 380 ACANVSSLEEGSQFHGKAITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-----KE 406
            W AM++ Y Q     E + LF KM +  GL P+  T++ V+ AC R+          K 
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMIT 460
               + I   +G      + ++D++SR GR+E +    + M    D + W T+++
Sbjct: 498 MTSEYGIVPSIGH----YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 144/262 (54%), Gaps = 6/262 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   ++  A++   +EAI  + EM    ++ D + F +VL A  G+  ++ GKQIHA +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  +    + V + L++MY KC    +    VFDR+ +K+ VSW +M+    + G+ + 
Sbjct: 297 IRTNFQ-DHIYVGSALIDMYCKCKCLHY-AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
           A++ F  M  S ++P  +TL     AC+N+S    L  G Q HG ++  G  +   + N+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVS---SLEEGSQFHGKAITSGLIHYVTVSNS 411

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +Y K G +DD+  LF     RD VSW  +VS+ +Q  + +E +    +M   G+KPD
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471

Query: 283 GVSIASVLPACSHLEMLDTGKE 304
           GV++  V+ ACS   +++ G+ 
Sbjct: 472 GVTLTGVISACSRAGLVEKGQR 493



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           G GA +     K IH   IR +   +  + + +V  YA      +ARRVFD +P  N+ +
Sbjct: 15  GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFS 74

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE--VTFIALFAACSHSGMVSEGM 630
           WN +++AY   G           +++E     E  P+   VT+  L    S SG+V   +
Sbjct: 75  WNNLLLAYSKAG-----------LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123

Query: 631 DLFYKMKDDY 640
             +  M  D+
Sbjct: 124 KAYNTMMRDF 133


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/725 (34%), Positives = 391/725 (53%), Gaps = 58/725 (8%)

Query: 191 SNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
           S LS    L   +QVH   LR  +    + ++  +++  A    +D A ++F      + 
Sbjct: 28  SALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPET 87

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
              N  +  LS++++  + ++   +M  +G+  D  S   +L A S ++ L  G EIH  
Sbjct: 88  HLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGL 147

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           A +     D  FV + LV MY  C  +   R +FD +  + +  W+ MI GY Q+    +
Sbjct: 148 AAKLGFDSD-PFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFND 206

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           AL+LF +M+    + P+   +S+V+ AC R+      + IH   ++  +  D ++Q+AL+
Sbjct: 207 ALLLFEEMKNY-NVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALV 265

Query: 429 DMY-------------------------------SRMGRIEISKTIFDDMEVRDTVSWNT 457
            MY                               S++G+IE ++++F+ M  +D V W+ 
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           MI+GY       +AL L  EMQ+                 L  KP+ +T+++V+  C  L
Sbjct: 326 MISGYAESDSPQEALNLFNEMQS-----------------LGIKPDQVTMLSVITACAHL 368

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
            AL + K IH +  +N     + + +AL++MYAKCG L  ARR+FD MP +NVI+W  +I
Sbjct: 369 GALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMI 428

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            A+ MHG+    L     M  E      ++PN +TF+ +  ACSH+G+V EG  +FY M 
Sbjct: 429 SAFAMHGDAGSALRFFHQMEDEN-----IEPNGITFVGVLYACSHAGLVEEGRKIFYSMI 483

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           +++ I P   HY C+VDL GRA  + +A +L+  MP        W SL+ ACR+H  +E+
Sbjct: 484 NEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLA-PNVIIWGSLMAACRVHGEIEL 542

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GE AA+ L  L+PD    +V LSNIY+ A+ W+    VRK MK  G+ KE GCS  E  +
Sbjct: 543 GEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           EIH+FL  D SH+ +++++  L  +  +++  GY P+T  +L ++ EEEK+ ++  HSEK
Sbjct: 603 EIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEK 662

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LA+ +G++    G+ IR+ KNLRVC DCH   K  SK+  REI++RD  RFHH+K+G CS
Sbjct: 663 LALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCS 722

Query: 878 CGDYW 882
           C DYW
Sbjct: 723 CKDYW 727



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 258/538 (47%), Gaps = 59/538 (10%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +  A++    L+  KQ+HA +++     S+  +   +++      S +     VF+ I +
Sbjct: 26  LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCA-LSSSLDYALSVFNLIPK 84

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
            +    N  +  L R  + +  L  +  M    +    F+   +  A   LSR   L  G
Sbjct: 85  PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKA---LSRVKSLVEG 141

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            ++HG + ++G + + F+   L+ MYA  GR+ +A+ +F     RD+V+W+ ++    Q+
Sbjct: 142 LEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQS 201

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
             F +A++   +M    ++PD + +++VL AC     L  GK IH + + N+I++D   +
Sbjct: 202 GLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD-PHL 260

Query: 322 GSALVDMYCNC-------------------------------REVECGRRVFDFISDKKI 350
            SALV MY +C                                ++E  R VF+ +  K +
Sbjct: 261 QSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL 320

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W+AMI+GY +++  +EAL LF +M+ + G+ P+  TM SV+ AC    A    + IH 
Sbjct: 321 VCWSAMISGYAESDSPQEALNLFNEMQSL-GIKPDQVTMLSVITACAHLGALDQAKWIHL 379

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
              K G G    + NAL++MY++ G +E ++ IFD M  ++ +SW  MI+ + +   HGD
Sbjct: 380 FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM---HGD 436

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           A   LR    ME+E    N+          +PN IT + VL  C     + +G++I    
Sbjct: 437 AGSALRFFHQMEDE----NI----------EPNGITFVGVLYACSHAGLVEEGRKIFYSM 482

Query: 531 I--RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           I   N+    V  G  +VD++ +   L  A  + + MP+  NVI W  ++ A  +HGE
Sbjct: 483 INEHNITPKHVHYG-CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 217/463 (46%), Gaps = 58/463 (12%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR  +RS +  + +L Y  M    +  D F+FP +LKA++ ++ L  G +IH    K G+
Sbjct: 94  LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S   V   LV MY  CG  + +   +FD++  +D V+W+ MI   C+ G ++ AL  F
Sbjct: 154 D-SDPFVQTGLVRMYAACGR-IAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLF 211

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALM 224
             M   NVEP    L +V  AC    R   L  G+ +H     N++ V   +  + +AL+
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSAC---GRAGNLSYGKMIHDFIMENNIVV---DPHLQSALV 265

Query: 225 AMYA-------------------------------KLGRVDDAKTLFKSFEDRDLVSWNT 253
            MYA                               KLG++++A+++F     +DLV W+ 
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S  +++D   EA+    +M   GIKPD V++ SV+ AC+HL  LD  K IH +  +N 
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385

Query: 314 ----ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
               + I+N     AL++MY  C  +E  RR+FD +  K +  W  MI+ +  +     A
Sbjct: 386 FGGALPINN-----ALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSA 440

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM- 428
           L  F +ME+   + PN  T   V+ AC  +    +   I    I       ++V    M 
Sbjct: 441 LRFFHQMED-ENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMV 499

Query: 429 DMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
           D++ R   +  +  + + M +  + + W +++     C  HG+
Sbjct: 500 DLFGRANLLREALELVEAMPLAPNVIIWGSLMAA---CRVHGE 539



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 61/438 (13%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           ++  A S    L   K++HA  LR+ +    S +   ++        ++    VF+ I  
Sbjct: 25  TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
            +  L N  +    ++E  E+ L+++ +M    GL  +  +   ++ A  R ++  +   
Sbjct: 85  PETHLCNRFLRELSRSEEPEKTLLVYERMR-TQGLAVDRFSFPPLLKALSRVKSLVEGLE 143

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IHG A KLG   D +VQ  L+ MY+  GRI  ++ +FD M  RD V+W+ MI GY   G 
Sbjct: 144 IHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGL 203

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             DAL+L  EM+N   E                 P+ + L TVL  CG    L+ GK IH
Sbjct: 204 FNDALLLFEEMKNYNVE-----------------PDEMMLSTVLSACGRAGNLSYGKMIH 246

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNF------------------------------ 557
            + + N +  D  + SALV MYA CG ++                               
Sbjct: 247 DFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIE 306

Query: 558 -ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            AR VF+ M  ++++ W+ +I  Y      QE L L   M + G     +KP++VT +++
Sbjct: 307 NARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLG-----IKPDQVTMLSV 361

Query: 617 FAACSHSGMVSEG--MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
             AC+H G + +   + LF       G  P  +    ++++  + G +E A ++ + MP 
Sbjct: 362 ITACAHLGALDQAKWIHLFVDKNGFGGALPINN---ALIEMYAKCGSLERARRIFDKMPR 418

Query: 675 EFDKAGAWSSLLGACRIH 692
           +     +W+ ++ A  +H
Sbjct: 419 K--NVISWTCMISAFAMH 434



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 45/322 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    +S  F +A+L + EM   +++PD      VL A     +LS GK IH  +
Sbjct: 190 TWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFI 249

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS------------------------------DMWDV 133
           ++    +    + + LV MY  CGS                               + + 
Sbjct: 250 MENNIVVDP-HLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENA 308

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
             VF+++ +KD V W++MI+          AL  F  M    ++P   T++SV  AC++L
Sbjct: 309 RSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHL 368

Query: 194 SRRDG-----LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
              D      L + +   G +L +        NAL+ MYAK G ++ A+ +F     +++
Sbjct: 369 GALDQAKWIHLFVDKNGFGGALPIN-------NALIEMYAKCGSLERARRIFDKMPRKNV 421

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +SW  ++S+ + +     A+ F  QM    I+P+G++   VL ACSH  +++ G++I  Y
Sbjct: 422 ISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF-Y 480

Query: 309 ALRNDILIDNSFVG-SALVDMY 329
           ++ N+  I    V    +VD++
Sbjct: 481 SMINEHNITPKHVHYGCMVDLF 502


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/501 (42%), Positives = 313/501 (62%), Gaps = 25/501 (4%)

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P+ T+ S ++ +C  S      E  H   +K+G   D  +Q  L+D Y++ G +E ++ +
Sbjct: 28  PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNL 87

Query: 444 FDDMEVRDT--VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           FD+M  R++  V+WNTMI+ Y  CG+ G A+ + ++MQ+        NV          K
Sbjct: 88  FDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQS-------ENV----------K 130

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P  +T++++L  C  L AL  G+ IH Y     L  DVV+G+AL+DMY KCG L  A  V
Sbjct: 131 PTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDV 190

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F  +  +N+  WN II+  GM+G G+E +     M  EG     +KP+ VTF+ + + CS
Sbjct: 191 FHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG-----IKPDGVTFVGILSGCS 245

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           HSG++S G   F +M   YG+EP  +HY C+VDLLGRAG +++A +LI  MP + +    
Sbjct: 246 HSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSM-V 304

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
             SLL AC+IH++ ++GE   Q L  L+P    +YV LSN+Y+S   WD     RK M +
Sbjct: 305 LGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIK 364

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            GV K PGCS IE  + +H+F+AGD SH Q  Q++ FL+ +++ ++ +G+VP+T+ VLH+
Sbjct: 365 RGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHD 424

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           + EEEKE  +  HSE++A+AFG+++TPPG TIRV KNLR C+DCH A K IS    REII
Sbjct: 425 IEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREII 484

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD +RFHHF+NG+CSC DYW
Sbjct: 485 VRDRKRFHHFRNGSCSCNDYW 505



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 169/327 (51%), Gaps = 31/327 (9%)

Query: 171 MLYSNVEPS--SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
           ML ++V PS  SF+L+  + A S  ++     LG   H   +++G E++  +   L+  Y
Sbjct: 21  MLRNDVLPSKTSFSLILRSCAISGEAQ-----LGEAFHCQIMKMGFEYDMILQTGLLDFY 75

Query: 228 AKLGRVDDAKTLFKSFEDRDL--VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           AK G V++A+ LF +  +R+   V+WNT++S+  Q  +F  A+   +QM    +KP  V+
Sbjct: 76  AKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVT 135

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           + S+L AC+HL  LD G+ IH Y +R   L  +  +G+AL+DMYC C  +E    VF  +
Sbjct: 136 MVSLLSACAHLGALDMGEWIHGY-IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 194

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS------ 399
           S K I  WN++I G G N   EEA+  FI ME+  G+ P+  T   ++  C  S      
Sbjct: 195 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK-EGIKPDGVTFVGILSGCSHSGLLSAG 253

Query: 400 -EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
              F +  G++G    L  G + Y    ++D+  R G ++ +  +   M ++     N+M
Sbjct: 254 QRYFSEMLGVYG----LEPGVEHY--GCMVDLLGRAGYLKEALELIRAMPMKP----NSM 303

Query: 459 ITGYTI--CGQHGDALMLLREMQNMEE 483
           + G  +  C  H D  +  +  Q + E
Sbjct: 304 VLGSLLRACQIHKDTKLGEQVTQQLLE 330



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 130/245 (53%), Gaps = 14/245 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y  M R+D+ P   +F  +L++ A   +  LG+  H  ++K G+    + +   L++ Y 
Sbjct: 18  YSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI-LQTGLLDFYA 76

Query: 125 KCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           K G  + +   +FD +TE++   V+WN+MI+   + G++  A+  F+ M   NV+P+  T
Sbjct: 77  KHGY-VEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVT 135

Query: 183 LVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEWNTFIMNALMAMYAKLGRVDDAKT 238
           +VS+  AC++L   D   +G  +HG      L++   +  + NAL+ MY K G ++ A  
Sbjct: 136 MVSLLSACAHLGALD---MGEWIHGYIRTKRLKI---DVVLGNALIDMYCKCGALEAAID 189

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F     +++  WN+I+  L  N +  EA+     M   GIKPDGV+   +L  CSH  +
Sbjct: 190 VFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 249

Query: 299 LDTGK 303
           L  G+
Sbjct: 250 LSAGQ 254



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 44/305 (14%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + +  +  +F  AI  + +M   +++P      ++L A A +  L +G+ IH ++
Sbjct: 100 TWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYI 159

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                 +  V + N L++MY KCG+ +     VF  ++ K+   WNS+I  L   G+ + 
Sbjct: 160 RTKRLKI-DVVLGNALIDMYCKCGA-LEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEE 217

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+ AF +M    ++P   T V +   CS              H   L  G+      + +
Sbjct: 218 AIAAFIVMEKEGIKPDGVTFVGILSGCS--------------HSGLLSAGQR---YFSEM 260

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + +Y     V+                +  +V  L +     EA+  +R M +   KP+ 
Sbjct: 261 LGVYGLEPGVEH---------------YGCMVDLLGRAGYLKEALELIRAMPM---KPNS 302

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALR-------NDILIDNSFVGSALVDMYCNCREVE 336
           + + S+L AC   +    G+++    L        N + + N +   +  D    CR++ 
Sbjct: 303 MVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLM 362

Query: 337 CGRRV 341
             R V
Sbjct: 363 IKRGV 367


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/601 (38%), Positives = 348/601 (57%), Gaps = 28/601 (4%)

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D     S L +C +L  +   +++HA    N     N  V + L+ MY     +E  + +
Sbjct: 52  DTKRFRSSLLSCRNLFQV---RQVHAQIATNGAF-RNLAVANKLLYMYVERGALEDAQEL 107

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +S +    W+ ++ GY +         +F ++   +G   +  +   V+ AC   + 
Sbjct: 108 FDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLR-SGAPLDDYSAPVVIRACRDLKD 166

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                 IH   +K GL    +V   L+DMY+R   +E +  IF  M  RD  +W  MI  
Sbjct: 167 LKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGA 226

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G   ++L+    M+N              + ++   P+ + L+TV+  C  L A+ 
Sbjct: 227 LAESGVPVESLVFFDRMRN--------------QGIV---PDKVALVTVVYACAKLGAMN 269

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           K K IHAY      + DV++G+A++DMYAKCG +  AR +FD M VRNVITW+ +I AYG
Sbjct: 270 KAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYG 329

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG+G++ LEL   M+  G     + PN +TF++L  ACSH+G++ EG   F  M D+YG
Sbjct: 330 YHGQGEKALELFPMMLRSG-----ILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYG 384

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P   HY C+VDLLGRAG++++A ++I  MP E D+   W +LLGACRIH+++++ E  
Sbjct: 385 VTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV-LWGALLGACRIHRHLDLAERV 443

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A++L  L+     HYVLLSNIY++A  W+     R  M + G+RK PG +WIE G+++++
Sbjct: 444 ARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQ 503

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F  GD +H +S +++  L+ L E++   GY PDT+ VL++V+EE K+ LL  HSEKLAIA
Sbjct: 504 FGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIA 563

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+L  P G  IR+ KNLRVC DCH   KF+S IE + II+RD +RFHHFK G CSC DY
Sbjct: 564 FGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDY 623

Query: 882 W 882
           W
Sbjct: 624 W 624



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 200/392 (51%), Gaps = 10/392 (2%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+HA +   G    ++ VAN L+ MY + G+ + D  ++FD ++++   SW+ ++    
Sbjct: 70  RQVHAQIATNG-AFRNLAVANKLLYMYVERGA-LEDAQELFDGMSKRHPYSWSVIVGGYA 127

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           + G +      FR +L S      ++   V  AC +L     L+ GR +H  +L+ G ++
Sbjct: 128 KVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLK---DLKCGRLIHCITLKCGLDY 184

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+   L+ MYA+   V+DA  +F     RDL +W  ++ +L+++   +E+++F  +M 
Sbjct: 185 GHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            +GI PD V++ +V+ AC+ L  ++  K IHAY       +D   +G+A++DMY  C  V
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLD-VILGTAMIDMYAKCGSV 303

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R +FD +  + +  W+AMI  YG +   E+AL LF  M   +G+ PN  T  S++ A
Sbjct: 304 ESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLR-SGILPNRITFVSLLYA 362

Query: 396 CVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTV 453
           C  +    + +        + G+  D      ++D+  R GR++ +  + + M V +D V
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
            W  ++    I      A  + R +  ++ +K
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQK 454



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 6/271 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +   A+   F      + E+ RS    D+++ P V++A   ++DL  
Sbjct: 110 GMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKC 169

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ IH   +K G        A TLV+MY +C   + D +++F ++ ++D  +W  MI  L
Sbjct: 170 GRLIHCITLKCGLDYGHFVCA-TLVDMYARCKV-VEDAHQIFVKMWKRDLATWTVMIGAL 227

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
              G    +L  F  M    + P    LV+V  AC+ L     +   + +H      G  
Sbjct: 228 AESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLG---AMNKAKAIHAYINGTGYS 284

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  +  A++ MYAK G V+ A+ +F   + R++++W+ ++++   + +  +A+     M
Sbjct: 285 LDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMM 344

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
              GI P+ ++  S+L ACSH  +++ G+  
Sbjct: 345 LRSGILPNRITFVSLLYACSHAGLIEEGQRF 375


>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
 gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 603

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/608 (38%), Positives = 351/608 (57%), Gaps = 32/608 (5%)

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC-- 337
           K D V+  + +   S    L    +I AYA+++ I  D SFV   +   +C     E   
Sbjct: 23  KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLI--NFCTESPTESSM 79

Query: 338 --GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R +F+ +S+  I ++N+M  GY +     E   LF+++ E  G+ P+  T  S++ A
Sbjct: 80  SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKA 138

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C  ++A  +   +H  ++KLGL  + YV   L++MY+    ++ ++ +FD +     V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MITGY    +  +AL L REMQ                     KPN ITL++VL  C 
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGK-----------------YLKPNEITLLSVLSSCA 241

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L +L  GK IH YA ++     V V +AL+DM+AKCG L+ A  +F+ M  ++   W+ 
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+AY  HG+ ++ + + + M     R   V+P+E+TF+ L  ACSH+G V EG   F +
Sbjct: 302 MIVAYANHGKAEKSMLMFERM-----RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 356

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M   +GI PS  HY  +VDLL RAG +EDAY+ I+ +P        W  LL AC  H N+
Sbjct: 357 MVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS-PTPMLWRILLAACSSHNNL 415

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           ++ E  ++ +F L+      YV+LSN+Y+  + W+    +RK MK+    K PGCS IE 
Sbjct: 416 DLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEV 475

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGH 814
            + +H+F +GDG    + +LH  L+ + + ++  GYVPDTS V+H N+N++EKE  L  H
Sbjct: 476 NNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYH 535

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLAI FG+LNTPPGTTIRV KNLRVC DCH A K IS I  R+++LRDV+RFHHF++G
Sbjct: 536 SEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDG 595

Query: 875 TCSCGDYW 882
            CSCGD+W
Sbjct: 596 KCSCGDFW 603



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 6/256 (2%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  +R     E    ++E+    I PDN+ FP++LKA A  + L  G+Q+H   +K G  
Sbjct: 102 RGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD 161

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +V V  TL+NMY +C  D+     VFDRI E   V +N+MI    R  + + AL  FR
Sbjct: 162 -DNVYVCPTLINMYTEC-EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYA 228
            M    ++P+  TL+SV  +C+ L   D   LG+ +H  + +        +N AL+ M+A
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLD---LGKWIHKYAKKHSFCKYVKVNTALIDMFA 276

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +DDA ++F+    +D  +W+ ++ + + + K  ++++   +M    ++PD ++   
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336

Query: 289 VLPACSHLEMLDTGKE 304
           +L ACSH   ++ G++
Sbjct: 337 LLNACSHTGRVEEGRK 352



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 189/404 (46%), Gaps = 24/404 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATL 155
           QI A+ +K    +  V+    L+N   +    S M     +F+ ++E D V +NSM    
Sbjct: 47  QIQAYAIKSH--IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGY 104

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            RF         F  +L   + P ++T  S+  AC+       L  GRQ+H  S+++G +
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA---VAKALEEGRQLHCLSMKLGLD 161

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N ++   L+ MY +   VD A+ +F    +  +V +N +++  ++ ++  EA+   R+M
Sbjct: 162 DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + +KP+ +++ SVL +C+ L  LD GK IH YA ++        V +AL+DM+  C  
Sbjct: 222 QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGS 280

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    +F+ +  K    W+AMI  Y  +   E+++++F +M     + P+  T   ++ 
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENVQPDEITFLGLLN 339

Query: 395 ACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT- 452
           AC  +    +        + K G+        +++D+ SR G +E +    D + +  T 
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           + W  ++     C  H +  +          EK    +++LD++
Sbjct: 400 MLWRILLAA---CSSHNNLDL---------AEKVSERIFELDDS 431


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/663 (38%), Positives = 347/663 (52%), Gaps = 72/663 (10%)

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-----LVDMYCNCREVEC 337
           G S+  +L AC     L + +  HA  L   +L+  S   +A     L+  Y  C  +  
Sbjct: 12  GESLLRLLAACRAPAHLPSLRAAHARLL---VLLHPSHPSAAHANVKLIQAYAACSALPL 68

Query: 338 GRRVF-----DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSS 391
              V      D  S      +N +I     +    +AL+LF  M       +P+  T   
Sbjct: 69  AHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPL 128

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
            + +C  S+       IH    KL L R+ YV ++ + MYSR GR E +  +FD M  RD
Sbjct: 129 ALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRD 188

Query: 452 TVSWNTMITGYTICGQHGDALMLLRE--------------------MQNMEEEKNR---- 487
            VSWN MI G+   G    A+ + ++                    M N + +  R    
Sbjct: 189 VVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRR 248

Query: 488 ---------------------NNVYDLDETVL-------RPKPNSITLMTVLPGCGALSA 519
                                NN + +    L         +P+SITL TVLP CG LSA
Sbjct: 249 VFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSA 308

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
            + GK IH    R  +  ++++ +AL+DMYA CGCL  AR +FDLM  R+VI+W  II A
Sbjct: 309 FSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISA 368

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           YG HG G+E ++L + M+ +G     ++P+ + F+A+ AACSH+G++++G   F  M   
Sbjct: 369 YGKHGHGREAVDLFEKMLGQG-----LEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSR 423

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           Y I P  +HY C+VDLLGRAG + +AY  I  M  E ++   W +LL ACRIH N++IG 
Sbjct: 424 YHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNER-VWGALLQACRIHSNMDIGL 482

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
           +AA NLF L P+   +YVLLSN+Y+ A  W     VR  M   G++K PG S +E GD++
Sbjct: 483 VAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQV 542

Query: 760 HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819
           H F  GD  H QSE ++  L+ L  ++R  GY P+    LH+V EE+KE  L  HSEKLA
Sbjct: 543 HTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLA 602

Query: 820 IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879
           IAF +LNT PGT IRV  NLR C+DCH A K IS I  REI+L+D  R HH   G CSCG
Sbjct: 603 IAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCG 662

Query: 880 DYW 882
           DYW
Sbjct: 663 DYW 665



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 203/419 (48%), Gaps = 55/419 (13%)

Query: 2   ASSAQCLTLL-PSPPLSS------LQTHQ-----PPATTATSLPLPGSQTRCKESWIESL 49
           A+ A+ L LL PS P ++      +Q +      P A T      P  ++R        L
Sbjct: 33  AAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVL 92

Query: 50  -RSEARSNQFREAILSYIEMTRSDIQ--PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
            R+   S+  R+A++ +  M        PD++ +P  LK+ +  +DL LG QIH+ V K 
Sbjct: 93  IRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKL 152

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
                +V VA++ ++MY +CG    D Y+VFD +  +D VSWN+MIA   R G +D A+E
Sbjct: 153 RLD-RNVYVAHSAISMYSRCGRP-EDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIE 210

Query: 167 AFR-MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMA 225
            F+  ++     P + T+  +  A  N ++ D +R  R+V                    
Sbjct: 211 VFKQFVVLQGSMPDAGTMAGILPAMGN-AKPDDIRFVRRV-------------------- 249

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
                         F + + ++L+SWN +++  + N+  ++AV     M    ++PD ++
Sbjct: 250 --------------FDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSIT 295

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           +A+VLP C  L     GK IH    R + +  N  + +AL+DMY +C  ++  R +FD +
Sbjct: 296 LATVLPPCGELSAFSVGKRIHEIIKRKN-MCPNLLLENALMDMYASCGCLKDAREIFDLM 354

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           S + +  W ++I+ YG++ +  EA+ LF KM    GL P++    +V+ AC  +    D
Sbjct: 355 SARDVISWTSIISAYGKHGHGREAVDLFEKMLG-QGLEPDSIAFVAVLAACSHAGLLAD 412



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 11/260 (4%)

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           VV  G    + T+A  L  M      D+  V +VFD +  K+ +SWN+M+A         
Sbjct: 216 VVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHV 275

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
            A+E F +M    VEP S TL +V   C  LS      +G+++H    R     N  + N
Sbjct: 276 KAVELFMLMEKDEVEPDSITLATVLPPCGELS---AFSVGKRIHEIIKRKNMCPNLLLEN 332

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           ALM MYA  G + DA+ +F     RD++SW +I+S+  ++    EAV    +M  +G++P
Sbjct: 333 ALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEP 392

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D ++  +VL ACSH  +L  GK           +I  +   + +VD+        C    
Sbjct: 393 DSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLL---GRAGCINEA 449

Query: 342 FDFISDKKIA----LWNAMI 357
           +DFI+   I     +W A++
Sbjct: 450 YDFITTMLIEPNERVWGALL 469


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 257/756 (33%), Positives = 401/756 (53%), Gaps = 33/756 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW  ++   A+     +A+  +    R+     P+ F   + L+A A  + +S G+Q+H 
Sbjct: 79  SWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHG 138

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
             V+ G    +V V   L+N+Y K G  +     VFD +  K+ V+W ++I    + G+ 
Sbjct: 139 VAVRIGLD-GNVYVGTALINLYAKVGC-IDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
            +ALE F  M    V P  F L S   ACS L   +G   GRQ HG + R+  E +  ++
Sbjct: 197 GVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEG---GRQTHGYAYRIAVETDASVI 253

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NAL+ +Y K  R+  A+ LF   E+R+LVSW T+++   QN    EA+    Q++  G +
Sbjct: 254 NALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQ 313

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  + AS+L +C  L  +  G+++HA+A++ ++  D  +V ++L+DMY  C  +   R 
Sbjct: 314 PDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE-YVKNSLIDMYAKCEHLTEARA 372

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VF+ +++     +NAMI GY +      A+ +F KM   + L P+  T  S++       
Sbjct: 373 VFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCS-LKPSPLTFVSLLGVSSSQS 431

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    + IHG  +K G   D Y  ++L+D+YS+   +E +K +F+ M  RD V WN MI 
Sbjct: 432 AIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIF 491

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G     Q  +A+ L  ++Q                 V    PN  T + ++     L ++
Sbjct: 492 GLAQNEQGEEAVKLFNQLQ-----------------VSGLAPNEFTFVALVTVASTLVSM 534

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G++ HA  I+    +D  V +AL+DMYAKCG +   R +F+    ++VI WN +I  Y
Sbjct: 535 FHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTY 594

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG+ +E L + + M   G     V+PN VTF+ + +AC+H+G+V EG+  F  MK  Y
Sbjct: 595 AQHGQAEEALYVFRMMGGTG-----VEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKY 649

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            IEP  +HYA VV+L GR+GK+  A + I  MP E   A  W SLL AC +  NVEIG  
Sbjct: 650 AIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE-PAAAVWRSLLSACHLFGNVEIGRY 708

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           A +   L +P  +   VL+SNIY+S  LW  A  +R+ M   GV KEPG SWIE   E+H
Sbjct: 709 ATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVH 768

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
            F+A    H +++ ++  L+ L+  ++  GY+PDTS
Sbjct: 769 TFIARGREHPEADVIYSLLDELTSILKNGGYLPDTS 804



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 242/482 (50%), Gaps = 40/482 (8%)

Query: 200 RLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           RL    H  ++  G   + F+ N L+  Y+KLGRV DA+ LF     ++LVSW + +S  
Sbjct: 28  RLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMH 87

Query: 259 SQNDKFLEAVMFLR--QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           +Q+    +AV      Q A  G  P+   +AS L AC+    +  G+++H  A+R   L 
Sbjct: 88  AQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIG-LD 146

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N +VG+AL+++Y     ++    VFD +  K    W A+ITGY Q      AL LF KM
Sbjct: 147 GNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKM 206

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
             + G+ P+   ++S V AC            HG+A ++ +  D  V NAL+D+Y +  R
Sbjct: 207 -GLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSR 265

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           + +++ +FD ME R+ VSW TMI GY               MQN  + +     + L + 
Sbjct: 266 LSLARKLFDCMENRNLVSWTTMIAGY---------------MQNSCDAEAMAMFWQLSQE 310

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               +P+     ++L  CG+L+A+ +G+++HA+AI+  L +D  V ++L+DMYAKC  L 
Sbjct: 311 GW--QPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLT 368

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            AR VF+ +   + I++N +I  Y   G+    +++   M     R   +KP+ +TF++L
Sbjct: 369 EARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKM-----RYCSLKPSPLTFVSL 423

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGI----EPSPDHYA--CVVDLLGRAGKVEDAYQLIN 670
                    VS         K  +G+      S D YA   ++D+  +   VEDA  + N
Sbjct: 424 LG-------VSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFN 476

Query: 671 MM 672
           +M
Sbjct: 477 LM 478



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 31/326 (9%)

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  A+  G   D ++ N L+  YS++GR+  ++ +FD M  ++ VSW + I+ +   G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            DA+ L    Q     +                PN   L + L  C    A++ G+++H 
Sbjct: 94  EDAVALFAAFQRASGGE---------------APNEFLLASALRACAQSRAVSFGQQVHG 138

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
            A+R  L  +V VG+AL+++YAK GC++ A  VFD +PV+N +TW  +I  Y   G+G  
Sbjct: 139 VAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGV 198

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            LEL   M  +G     V+P+     +  +ACS  G + EG    +       +E     
Sbjct: 199 ALELFGKMGLDG-----VRPDRFVLASAVSACSALGFL-EGGRQTHGYAYRIAVETDASV 252

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG-----ACRIHQNVEIGEIAAQ 703
              ++DL  +  ++  A +L + M  E     +W++++      +C         +++ +
Sbjct: 253 INALIDLYCKCSRLSLARKLFDCM--ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQE 310

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLW 729
                +PDV +   +L++  S A +W
Sbjct: 311 G---WQPDVFACASILNSCGSLAAIW 333


>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/609 (39%), Positives = 355/609 (58%), Gaps = 38/609 (6%)

Query: 294 SHLEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           +H  ++ TG  +H         +LI +SF GS           +    ++FD I    + 
Sbjct: 34  THAHLITTGLILHPITANKLLKVLIASSF-GS-----------LSYAHQLFDQIPKPDVF 81

Query: 352 LWNAMITGYGQ-NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           ++N MI  +         ++ +F+ M  V+G  PN  T   V  AC       + E I  
Sbjct: 82  IYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRV 141

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           HAIK+GL  + +V NA++ MY+  G ++ ++ +FD    +D  SWN MI GY   G+ G 
Sbjct: 142 HAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGR 201

Query: 471 ALMLLREMQNME------------EEKNRNNVYDLDETVLR--PKPNSITLMTVLPGCGA 516
           A  +  EM   +            +        DL   +L+  P PN  TL + L  C  
Sbjct: 202 AKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACAN 261

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVR-NVITWN 574
           L AL +G+ IH Y  ++ +  +  + ++L+DMYAKCG ++FA +VF D   ++  V  WN
Sbjct: 262 LVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWN 321

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I  Y MHG+ +E ++L + M  E     +V PN+VTF+AL  ACSH  +V EG   F 
Sbjct: 322 AMIGGYAMHGKSKEAIDLFEQMKVE-----KVSPNKVTFVALLNACSHGKLVEEGRGYFK 376

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            M   YGIEP  +HY C+VDLLGR+G +++A + +  MP   D A  W +LLGACRIH++
Sbjct: 377 SMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD-ATIWGALLGACRIHKD 435

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E G+   + +  L+ D    +VLL+N+YS++  WD+A  VR+K++  G +K PGCS IE
Sbjct: 436 IERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIE 495

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCG 813
                H+FL GD SH Q++QL+ FL+ ++ +++  GYVP+   VL ++++EE KET L  
Sbjct: 496 LNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSK 555

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAIAFG++NTPPGT IR+ KNLRVC DCH+ATKFISK+  REII+RD  R+HHFK+
Sbjct: 556 HSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKD 615

Query: 874 GTCSCGDYW 882
           G CSC DYW
Sbjct: 616 GFCSCKDYW 624



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 188/412 (45%), Gaps = 46/412 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT-- 154
           KQ HAH++  G  L  +T    L  +       +   +++FD+I + D   +N+MI    
Sbjct: 32  KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHA 91

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
           +      +       M+  S   P+ +T V V  AC N     G+  G Q+  +++++G 
Sbjct: 92  VIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGN---GLGVLEGEQIRVHAIKIGL 148

Query: 214 EWNTFIMNALMAMYAKLGRVDDA-------------------------------KTLFKS 242
           E N F+ NA++ MYA  G VD+A                               K +F  
Sbjct: 149 ESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDE 208

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
             +RD+VSW TI++   Q   F EA+    +M   G  P+  ++AS L AC++L  LD G
Sbjct: 209 MSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG 268

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF--DFISDKKIALWNAMITGY 360
           + IH Y  +++I ++   + S L+DMY  C E++   +VF  ++    K+  WNAMI GY
Sbjct: 269 RWIHVYIDKSEIKMNERLLAS-LLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGY 327

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-IHGHAIKLGLGR 419
             +   +EA+ LF +M +V  + PN  T  +++ AC   +   +  G     A   G+  
Sbjct: 328 AMHGKSKEAIDLFEQM-KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEP 386

Query: 420 DRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +      ++D+  R G + E  +T+F+     D   W  ++     C  H D
Sbjct: 387 EIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGA---CRIHKD 435



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 44/276 (15%)

Query: 65  YIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           ++ M R S   P+ + F  V KA      +  G+QI  H +K G   S++ V N ++ MY
Sbjct: 104 FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLE-SNLFVTNAMIRMY 162

Query: 124 GKCG--------------SDM--WDVY--------------KVFDRITEKDQVSWNSMIA 153
              G               D+  W++               ++FD ++E+D VSW ++IA
Sbjct: 163 ANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIA 222

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNS 209
              + G +  AL+ F  ML +   P+ FTL S   AC+NL   D    GR +H     + 
Sbjct: 223 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQ---GRWIHVYIDKSE 279

Query: 210 LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV--SWNTIVSSLSQNDKFLEA 267
           +++   N  ++ +L+ MYAK G +D A  +F       L    WN ++   + + K  EA
Sbjct: 280 IKM---NERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEA 336

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           +    QM +  + P+ V+  ++L ACSH ++++ G+
Sbjct: 337 IDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGR 372



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F+EA+  + EM ++   P+ F   + L A A +  L  G+ IH ++
Sbjct: 216 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI 275

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV-SWNSMIATLCRFGKWD 162
            K    ++   +A +L++MY KCG   +      D    K +V  WN+MI      GK  
Sbjct: 276 DKSEIKMNERLLA-SLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSK 334

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            A++ F  M    V P+  T V++  ACS+
Sbjct: 335 EAIDLFEQMKVEKVSPNKVTFVALLNACSH 364


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 355/609 (58%), Gaps = 31/609 (5%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G+  D ++ + ++  CS    +  GK +H +           FV + L++MY    
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE-PKMFVVNTLLNMYVKFN 104

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E    +FD + ++ +  W  MI+ Y  N+ +++AL   I M    G+ PN  T SSV+
Sbjct: 105 LLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFR-EGVRPNMFTYSSVL 162

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC   +  P+   +H   IK GL  D +V++AL+D+YS+   ++ +  +FD+M  RD V
Sbjct: 163 RAC---DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
            WN++I G+       +AL L + M+           +  D+          TL +VL  
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAG--------FLADQA---------TLTSVLRA 262

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  L+ L  G+++H + ++     D+++ +AL+DMY KCG L  A   F  M  ++VI+W
Sbjct: 263 CTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISW 320

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           + ++     +G  ++ LEL ++M   GSR     PN +T + +  ACSH+G+V +G   F
Sbjct: 321 STMVAGLAQNGYSRQALELFESMKESGSR-----PNYITVLGVLFACSHAGLVEKGWYYF 375

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             MK  +G++P  +HY C++DLLGRAG++++A +LI+ M  E D    W +LLGACR+H+
Sbjct: 376 RSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSV-TWRTLLGACRVHR 434

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           NV++   AA+ +  LEP+ A  Y+LLSNIY++ Q W+   +VRK M   G+RK PGCSWI
Sbjct: 435 NVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWI 494

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E   +IH F+ GD SH + E++   L +L ER+   GYVPDT+ VL ++  E+KE  L  
Sbjct: 495 EVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRY 554

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAI FG++N     T+R+ KNLR+C DCH   K +S++E R I++RD  R+HHF++
Sbjct: 555 HSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQD 614

Query: 874 GTCSCGDYW 882
           G CSCGDYW
Sbjct: 615 GVCSCGDYW 623



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 207/398 (52%), Gaps = 22/398 (5%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R  +  D   +  ++K  +    +  GK++H H+   GY    + V NTL+NMY K  
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE-PKMFVVNTLLNMYVKFN 104

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
             + +   +FD + E++ VSW +MI+        D AL+   +M    V P+ FT  SV 
Sbjct: 105 L-LEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVL 162

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC      DGL   RQ+H   ++ G E + F+ +AL+ +Y+K   +D+A  +F     R
Sbjct: 163 RAC------DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR 216

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           DLV WN+I+   +QN    EA+   ++M   G   D  ++ SVL AC+ L +L+ G+++H
Sbjct: 217 DLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH 276

Query: 307 AYALR--NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
            + L+   D++++N     AL+DMYC C  +E     F  + +K +  W+ M+ G  QN 
Sbjct: 277 VHVLKFDQDLILNN-----ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD--RY 422
           Y  +AL LF  M+E +G  PN  T+  V+ AC  +    +K   +  ++K   G D  R 
Sbjct: 332 YSRQALELFESMKE-SGSRPNYITVLGVLFACSHA-GLVEKGWYYFRSMKKLFGVDPGRE 389

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
               L+D+  R GR++ +  +  +ME   D+V+W T++
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL 427



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 37/329 (11%)

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           +++D    M  +   E  G++ +A T S ++  C    A  + + +H H    G     +
Sbjct: 32  HQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMF 91

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V N L++MY +   +E ++ +FD+M  R+ VSW TMI+ Y+                 + 
Sbjct: 92  VVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS---------------NKLN 136

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
           ++  +  +    E V   +PN  T  +VL  C  L  L   +++H   I+  L +DV V 
Sbjct: 137 DKALKCLILMFREGV---RPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVR 190

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           SAL+D+Y+K   L+ A  VFD MP R+++ WN II  +  + +G E L L K M     R
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM----KR 246

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDL---FYKMKDDYGIEPSPDHYACVVDLLGRA 659
            G +  ++ T  ++  AC+   ++  G  +     K   D  +  +      ++D+  + 
Sbjct: 247 AGFL-ADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNA------LIDMYCKC 299

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G +EDA    + M  +     +WS+++  
Sbjct: 300 GSLEDANSAFSRMVEK--DVISWSTMVAG 326



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 32/233 (13%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR    W   +   A+++   EA+  +  M R+    D     +VL+A  G+  L LG+Q
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQ 274

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H HV+K+   L    + N L++MY KCGS + D    F R+ EKD +SW++M+A L + 
Sbjct: 275 VHVHVLKFDQDL---ILNNALIDMYCKCGS-LEDANSAFSRMVEKDVISWSTMVAGLAQN 330

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN-------------LSRRDGLRLGRQV 205
           G    ALE F  M  S   P+  T++ V  ACS+             + +  G+  GR+ 
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREH 390

Query: 206 HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           +G               L+ +  + GR+D+A  L    E + D V+W T++ +
Sbjct: 391 YG--------------CLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 267/769 (34%), Positives = 417/769 (54%), Gaps = 50/769 (6%)

Query: 42  KESWIESLRSEARSNQ----------FREAILSYIEMTRSD---IQPDNFAFPAVLKAVA 88
           KE+ +  LR+E  SN+          F EAI ++  + +     +    +A+  ++ A +
Sbjct: 17  KETVLSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAY--LISACS 74

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
            ++ L  GK+IH H++K       +T+ N ++NMYGKC S + D  KVFD + E++ VSW
Sbjct: 75  YLRSLEHGKKIHDHMLK-SKSHPDLTLQNHILNMYGKCKS-LKDAQKVFDAMPERNVVSW 132

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
            S+IA   + G+   ALE +  ML S V P  FT  S+  ACS+L     + LGRQ+H +
Sbjct: 133 TSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLG---DIGLGRQLHAH 189

Query: 209 SLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
            L+  E+   I+  NAL++MY K   + DA  +F     RDL+SW ++++  SQ    LE
Sbjct: 190 VLK-SEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248

Query: 267 AVMFLRQMALRGIK-PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           A+ + ++M  +G+  P+     SV  ACS L   + G+++H  +++  +  D  F G +L
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRD-VFAGCSL 307

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
            DMY  C  + C R VF  I    +  WNA+I G+      +EA+  F +M    GL P+
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH-QGLIPD 366

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T+ S++ AC           +HG+  K+GL  D  V N L+ MY++   +  +   F+
Sbjct: 367 EITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFE 426

Query: 446 DMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           +M    D VSWN ++T    C +H  A  + R ++ M   ++R              P+ 
Sbjct: 427 EMRCNADLVSWNAILTA---CMRHDQAEEVFRLLKLMCISQHR--------------PDY 469

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           ITL  VL       ++  G ++H YA++  L  D  V + L+D+YAKCG L  A ++FD 
Sbjct: 470 ITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDS 529

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M   +V++W+ +I+ Y   G G+E L+L K M     R  +VKPN VTF+ +  ACSH G
Sbjct: 530 MINPDVVSWSSLILGYAQFGYGEEALKLFKTM-----RRLDVKPNHVTFVGVLTACSHVG 584

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG  L+  M+ ++GI P+ +H +C+VDLL RAG + +A   I+ M  + D    W +
Sbjct: 585 LVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIV-VWKT 643

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL AC+ H NV++G+ AA+N+  ++P  ++ +VLL NIY+S   W+    +R  MK+ GV
Sbjct: 644 LLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGV 703

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           RK PG SWIE  D IH F   D  H +  +++  LE L  +M   GYVP
Sbjct: 704 RKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 752


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 368/686 (53%), Gaps = 27/686 (3%)

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L   +Q H   LR+G   +T+++N L+           A  +F      ++  +NT++  
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILI 316
           +  ND F +AV     M   G  PD  +   VL AC+ L      G  +H+  ++     
Sbjct: 76  MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D  FV + LV +Y     +   R+VFD I +K +  W A+I GY ++    EAL LF  +
Sbjct: 136 D-VFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            E+ GL P++ T+  ++ AC R         I G+  + G   + +V  +L+DMY++ G 
Sbjct: 195 LEM-GLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +E ++ +FD M  +D V W+ +I GY   G   +AL +  EMQ       R NV      
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQ-------RENV------ 300

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
               +P+   ++ V   C  L AL  G         +   ++ V+G+AL+D YAKCG + 
Sbjct: 301 ----RPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVA 356

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A+ VF  M  ++ + +N +I    M G       +   MV  G     ++P+  TF+ L
Sbjct: 357 QAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVG-----MQPDGNTFVGL 411

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
              C+H+G+V +G   F  M   + + P+ +HY C+VDL  RAG + +A  LI  MP E 
Sbjct: 412 LCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEA 471

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
           +    W +LLG CR+H++ ++ E   + L  LEP  + HYVLLSNIYS++  WD+A  +R
Sbjct: 472 NSI-VWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIR 530

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
             + + G++K PGCSW+E    +H+FL GD SH  S +++  LE+L + +R+ GY P T 
Sbjct: 531 SSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTE 590

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
            VL +V EEEKE  L  HSEKLA+AF +++T     IRV KNLRVC DCH+A K +SK+ 
Sbjct: 591 FVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVT 650

Query: 857 SREIILRDVRRFHHFKNGTCSCGDYW 882
            REII+RD  RFHHF  G+CSC DYW
Sbjct: 651 GREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 235/517 (45%), Gaps = 36/517 (6%)

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
           G++ L   KQ H  +++ G    +  +   L +      +    V  VF +    +   +
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATV--VFAQTPHPNIFLY 69

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N++I  +     +  A+  +  M      P +FT   V  AC+ L       +G  +H  
Sbjct: 70  NTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHY--FHVGLSLHSL 127

Query: 209 SLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
            ++ G +W+ F+   L+ +Y+K G + DA+ +F    ++++VSW  I+    ++  F EA
Sbjct: 128 VIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEA 187

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +   R +   G++PD  ++  +L ACS +  L +G+ I  Y +R    + N FV ++LVD
Sbjct: 188 LGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGY-MRESGSVGNVFVATSLVD 246

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E  RRVFD + +K +  W+A+I GY  N   +EAL +F +M+    + P+  
Sbjct: 247 MYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQR-ENVRPDCY 305

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN-----ALMDMYSRMGRIEISKT 442
            M  V  AC R  A        G+  +  +  D ++ N     AL+D Y++ G +  +K 
Sbjct: 306 AMVGVFSACSRLGALE-----LGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKE 360

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F  M  +D V +N +I+G  +CG  G A  +  +M  +  +                 P
Sbjct: 361 VFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ-----------------P 403

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRV 561
           +  T + +L GC     +  G    +        T  +     +VD+ A+ G L  A+ +
Sbjct: 404 DGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDL 463

Query: 562 FDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
              MP+  N I W  ++    +H + Q    +LK ++
Sbjct: 464 IRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLI 500



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 212/446 (47%), Gaps = 27/446 (6%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAHVVKYG 107
           +R    ++ FR+A+  Y  M +    PDNF FP VLKA   +     +G  +H+ V+K G
Sbjct: 73  IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 108 YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
           +    V V   LV +Y K G  + D  KVFD I EK+ VSW ++I      G +  AL  
Sbjct: 133 FDWD-VFVKTGLVCLYSKNGF-LTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGL 190

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAM 226
           FR +L   + P SFTLV +  AC   SR   L  GR + G     G   N F+  +L+ M
Sbjct: 191 FRGLLEMGLRPDSFTLVRILYAC---SRVGDLASGRWIDGYMRESGSVGNVFVATSLVDM 247

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YAK G +++A+ +F    ++D+V W+ ++   + N    EA+    +M    ++PD  ++
Sbjct: 248 YAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAM 307

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
             V  ACS L  L+ G       +  D  + N  +G+AL+D Y  C  V   + VF  + 
Sbjct: 308 VGVFSACSRLGALELGNWARGL-MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR 366

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            K   ++NA+I+G     +   A  +F +M +V G+ P+  T   ++  C  +    D  
Sbjct: 367 RKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKV-GMQPDGNTFVGLLCGCTHAGLVDD-- 423

Query: 407 GIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
              GH    G+     V         ++D+ +R G +  ++ +   M +  +++ W  ++
Sbjct: 424 ---GHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALL 480

Query: 460 TGYTICGQHGDALM---LLREMQNME 482
            G   C  H D  +   +L+++  +E
Sbjct: 481 GG---CRLHKDTQLAEHVLKQLIELE 503



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 10/262 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     S  F EA+  +  +    ++PD+F    +L A + + DL+ G+ I  ++
Sbjct: 170 SWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYM 229

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G  + +V VA +LV+MY KCGS M +  +VFD + EKD V W+++I      G    
Sbjct: 230 RESG-SVGNVFVATSLVDMYAKCGS-MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKE 287

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE---WNTFIM 220
           AL+ F  M   NV P  + +V V  ACS L     L LG    G  L  G+    N  + 
Sbjct: 288 ALDVFFEMQRENVRPDCYAMVGVFSACSRLG---ALELGNWARG--LMDGDEFLSNPVLG 342

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+  YAK G V  AK +FK    +D V +N ++S L+       A     QM   G++
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402

Query: 281 PDGVSIASVLPACSHLEMLDTG 302
           PDG +   +L  C+H  ++D G
Sbjct: 403 PDGNTFVGLLCGCTHAGLVDDG 424


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/749 (33%), Positives = 398/749 (53%), Gaps = 41/749 (5%)

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
           +  D    N +I      G  + AL A+R ML +   P  FT   V   C+ L     L 
Sbjct: 68  SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLG---ALE 124

Query: 201 LGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            GR  H  ++R+G   +  +  N+L+A YAKLG V DA+ +F     RD+V+WN++V   
Sbjct: 125 EGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGY 184

Query: 259 SQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             N     A+   R+M   L+ ++ DGV I + L AC     L  G+E+HAY +R+ +  
Sbjct: 185 VSNGLGALALDCFREMHEGLQ-VQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQ 243

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D   VG++L+DMYC C  +     +F  +  + +  WN MI GY  N   EEA   F++M
Sbjct: 244 DVK-VGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQM 302

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
           +   G      T  +++ AC ++E+      +HG+  +        ++ AL++MYS++G+
Sbjct: 303 K-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGK 361

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           ++ S+TIF  M  +  VSWN MI  Y     + +A+ L  E+ N         +Y     
Sbjct: 362 VKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLN-------QPLY----- 409

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P+  T+  V+P    L  L + +++H+Y +R     + +V +A++ MYA+CG + 
Sbjct: 410 -----PDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVV 464

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            +R++FD M  ++VI+WN IIM Y +HG+G+  LE+   M + G     ++PNE TF+++
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNG-----LQPNESTFVSV 519

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP--P 674
             ACS SGM  EG   F  M+ DYGI P  +HY C+ DLLGRAG + +  + I  +P  P
Sbjct: 520 LTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITP 579

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
            F     W SLL A R   +++I E AA+ +F LE D    YV+LS++Y+ A  W+    
Sbjct: 580 TFR---IWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQR 636

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +R  M E G+R+    S +E       F+ GD +H QS+ +H   + LS ++ +  Y  +
Sbjct: 637 IRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRN 696

Query: 795 TSCVLHNVNEEEKETLLCG-HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
            S     ++   + T++   HS +LA+ FG++++     I V KN+R+CN CH A K IS
Sbjct: 697 LS---DPISLTSRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLIS 753

Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
           K   R I++ D   +H F +G+C CGDYW
Sbjct: 754 KYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 232/468 (49%), Gaps = 25/468 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R  A +     A+ +Y  M  +  +PD F FP V+K  A +  L  G+  H+  ++ G 
Sbjct: 79  IRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGL 138

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S V   N+L+  Y K G  + D  +VFD +  +D V+WNSM+      G   LAL+ F
Sbjct: 139 VGSEVYTGNSLLAFYAKLGM-VADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCF 197

Query: 169 RMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           R M     V+     +++   AC   S    L  GR+VH   +R G E +  +  +L+ M
Sbjct: 198 REMHEGLQVQHDGVGIIAALAACCLDS---ALMQGREVHAYVIRHGLEQDVKVGTSLLDM 254

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G +  A+ +F +   R +V+WN ++   + N    EA     QM   G + + V+ 
Sbjct: 255 YCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTA 314

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            ++L AC+  E    G+ +H Y  R+  L  +  + +AL++MY    +V+    +F  ++
Sbjct: 315 INLLAACAQTESSLYGRSVHGYVTRSQFL-PHVVLETALLEMYSKVGKVKSSETIFGQMT 373

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K +  WN MI  Y   E   EA+ LF+++     L+P+  TMS+VVPA V         
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLN-QPLYPDYFTMSAVVPAFVLLGLLRQCR 432

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H + ++L  G +  V NA+M MY+R G +  S+ IFD M  +D +SWNT+I GY I G
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHG 492

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           Q   AL +  EM++       N +          +PN  T ++VL  C
Sbjct: 493 QGKIALEMFSEMKS-------NGL----------QPNESTFVSVLTAC 523



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 214/480 (44%), Gaps = 29/480 (6%)

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           + +L+  +A  GR+ DA    +S  D  L   N ++   +       A+   R M   G 
Sbjct: 46  LKSLVLSHAAAGRMHDALAAVRSSPDAFL--HNVVIRGFADAGLPEAALAAYRAMLAAGA 103

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +PD  +   V+  C+ L  L+ G+  H+ A+R  ++    + G++L+  Y     V    
Sbjct: 104 RPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAE 163

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           RVFD +  + I  WN+M+ GY  N     AL  F +M E   +  +   + + + AC   
Sbjct: 164 RVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLD 223

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A      +H + I+ GL +D  V  +L+DMY + G I  ++ +F  M  R  V+WN MI
Sbjct: 224 SALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMI 283

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            GY + G   +A     +M+    E ++  V              +T + +L  C    +
Sbjct: 284 GGYALNGCPEEAFDCFVQMK---AEGHQVEV--------------VTAINLLAACAQTES 326

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
              G+ +H Y  R+     VV+ +AL++MY+K G +  +  +F  M  + +++WN +I A
Sbjct: 327 SLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAA 386

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKD 638
           Y       E + L   ++ +      + P+  T  A+  A    G++ +   +  Y ++ 
Sbjct: 387 YMYKEMYNEAITLFLELLNQ-----PLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRL 441

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
           DYG      +   V+ +  R G V  + ++ + M  +     +W++++    IH   +I 
Sbjct: 442 DYGENTLVTN--AVMHMYARCGDVVSSRKIFDKMAGK--DVISWNTIIMGYAIHGQGKIA 497



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +      + EAI  ++E+    + PD F   AV+ A   +  L   +Q+H+++
Sbjct: 379 SWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYI 438

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V+  YG +++ V N +++MY +CG D+    K+FD++  KD +SWN++I      G+  +
Sbjct: 439 VRLDYGENTL-VTNAVMHMYARCG-DVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKI 496

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
           ALE F  M  + ++P+  T VSV  ACS
Sbjct: 497 ALEMFSEMKSNGLQPNESTFVSVLTACS 524


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 263/837 (31%), Positives = 439/837 (52%), Gaps = 68/837 (8%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           +L+      D+ L + +HA ++K G       + N ++  Y K G  + D Y+VF  ++ 
Sbjct: 110 LLRLSVKYTDIDLARALHASILKLG---EDTHLGNAVIAAYIKLGL-VVDAYEVFMGMST 165

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
            D VS++++I++  +  +   A++ F  M  S +EP+ ++ V++  AC    R   L +G
Sbjct: 166 PDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACI---RSLELEMG 222

Query: 203 RQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            QVH  ++++G     F+ NAL+ +Y K G +D A  LF     RD+ SWNT++SSL + 
Sbjct: 223 LQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKG 282

Query: 262 DKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILI 316
             + +A+   R +   +G K D  +++++L AC+       G+EIHAYA+R    N++ +
Sbjct: 283 LSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSV 342

Query: 317 DNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDKKI 350
            N+ +G                          + ++  Y     V+    +F+ + +K  
Sbjct: 343 SNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNS 402

Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             +NA++TG+ +N    +AL LF++M +  G      T++ V+ AC           IHG
Sbjct: 403 VSYNALLTGFCKNNEGLKALNLFVRMVQ-EGAELTDFTLTGVINACGLLLKLEISRQIHG 461

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR--DTVSWNTMITGYTICGQH 468
             IK G   +  ++ AL+DM S+ GR++ +  +F  +     +++   +MI GY   G  
Sbjct: 462 FIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLP 521

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A+ L    Q+            LDE         +   ++L  CG L     GK+IH 
Sbjct: 522 EEAICLFYRCQS-------EGTMVLDE---------VAFTSILGVCGTLGFHEVGKQIHC 565

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
            A++     ++ VG++++ MY+KC  ++ A + F+ MP  +V++WN +I    +H +G E
Sbjct: 566 QALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDE 625

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAA--CSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            L +  +M   G     +KP+ +TF+ + +A   + S ++ E   LF  MK  + +EP+ 
Sbjct: 626 ALAIWSSMEKAG-----IKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTS 680

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFD-KAGAWSSLLGACRIHQNVEIGEIAAQNL 705
           +HYA +V +LG  G +E+A +LIN MP  FD +   W +LL  CR+H N  IG+  A+++
Sbjct: 681 EHYASLVGVLGYWGLLEEAEELINKMP--FDPEVSVWRALLDGCRLHANTSIGKRVAKHI 738

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             +EP   S YVL+SN+Y+++  W  +  VR+ M++ G+RK P  SW+    ++H F A 
Sbjct: 739 IGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYAR 798

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH QS  ++  L+ L  +  K GY PD S VL  V E++K+  L  HS KLA  +G+L
Sbjct: 799 DKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLL 858

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            T PG  IRV KN+ +C DCH   K+ + +  REII RD   FH F NG CSC  YW
Sbjct: 859 KTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 229/471 (48%), Gaps = 41/471 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S+   + S ++ N+  EAI  +  M  S I+P+ ++F A+L A     +L +G Q+HA  
Sbjct: 170 SYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALA 229

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GY    V VAN L+ +YGKCG  +     +FD + ++D  SWN+MI++L +   ++ 
Sbjct: 230 IKLGYS-QLVFVANALIGLYGKCGC-LDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEK 287

Query: 164 ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           ALE FR++  +   +   FTL ++  AC+    R     GR++H  ++R+G E N  + N
Sbjct: 288 ALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQ---GREIHAYAIRIGLENNLSVSN 344

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSW------------------------------ 251
           A++  Y + G ++    LF+    RD+++W                              
Sbjct: 345 AIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVS 404

Query: 252 -NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
            N +++   +N++ L+A+    +M   G +    ++  V+ AC  L  L+  ++IH + +
Sbjct: 405 YNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFII 464

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK--KIALWNAMITGYGQNEYDEE 368
           +      N+ + +AL+DM   C  ++   R+F  +S       +  +MI GY +N   EE
Sbjct: 465 KFGFR-SNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEE 523

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A+ LF + +    +  +    +S++  C         + IH  A+K G   +  V N+++
Sbjct: 524 AICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSII 583

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
            MYS+   I+ +   F+ M   D VSWN +I G  +  Q  +AL +   M+
Sbjct: 584 SMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSME 634



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 15/246 (6%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++N+  +A+  ++ M +   +  +F    V+ A   +  L + +QIH  ++K+G+  S+ 
Sbjct: 414 KNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFR-SNA 472

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT--LCRFGKWDLALEAFRMM 171
            +   L++M  KCG  M D  ++F  ++       NS+I T  +C + +  L  EA  + 
Sbjct: 473 CIEAALIDMCSKCGR-MDDADRMFQSLSTD---GGNSIIQTSMICGYARNGLPEEAICLF 528

Query: 172 LYSNVEPS----SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAM 226
                E +         S+   C  L   +   +G+Q+H  +L+ G      + N++++M
Sbjct: 529 YRCQSEGTMVLDEVAFTSILGVCGTLGFHE---VGKQIHCQALKTGFHAELGVGNSIISM 585

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y+K   +DDA   F +    D+VSWN +++    + +  EA+     M   GIKPD ++ 
Sbjct: 586 YSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITF 645

Query: 287 ASVLPA 292
             ++ A
Sbjct: 646 VLIVSA 651


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/616 (38%), Positives = 361/616 (58%), Gaps = 33/616 (5%)

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F  F+D+DL+       S S     L A+  +++ +L    PD    + +L  C+ L  +
Sbjct: 52  FCVFQDKDLLR-----KSQSDGGTGLYALDLIQRGSL---VPDYNLYSKLLKECTRLGKV 103

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G+ +HA+ + +  L ++  + + +V+MY  C  ++  RR+FD +  K +  W A+I G
Sbjct: 104 EQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAG 163

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN    +AL+LF +M  + GL PN  T+SS++ A            +H   +K G   
Sbjct: 164 FSQNNRPRDALLLFPQMLRL-GLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQS 222

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
             YV +AL+DMY+R G ++ ++  FD M  +  VSWN +I+G+   G+   AL LL +MQ
Sbjct: 223 SVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQ 282

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                  R N           +P   T  +V   C ++ AL +GK +HA+ I++ L    
Sbjct: 283 -------RKNF----------QPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
            +G+ L+DMYAK G ++ A+RVFD +   +V++WN ++     HG G+E L+  + M+  
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI 385

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
           G     ++PNE++F+ +  ACSHSG++ EG+  F  MK  Y +EP   HY   VDLLGR 
Sbjct: 386 G-----IEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRV 439

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           G ++ A + I  MP E   A  W +LLGACR+H+N+E+G  AA+  F L+P  +   +LL
Sbjct: 440 GLLDRAERFIREMPIE-PTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY+SA  W     VRK MKE GV+K+P CSW+E  + +H F+A D +H Q +++ G  
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKW 558

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           E +S ++++ GYVPDTS VL  V+++E+E  L  HSEKLA+AF +LNTP G+ IR+ KN+
Sbjct: 559 EEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNI 618

Query: 840 RVCNDCHQATKFISKI 855
           RVC DCH A KF+SKI
Sbjct: 619 RVCGDCHAAIKFVSKI 634



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 205/432 (47%), Gaps = 33/432 (7%)

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + N ++ MYAK G +DDA+ +F     +D+V+W  +++  SQN++  +A++   QM   G
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           ++P+  +++S+L A      LD G ++HA+ L+      + +VGSALVDMY  C  ++  
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ-SSVYVGSALVDMYARCGHMDAA 243

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +  FD +  K    WNA+I+G+ +    E AL L  KM+      P   T SSV  AC  
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQR-KNFQPTHFTYSSVFSACAS 302

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
             A    + +H H IK GL    ++ N L+DMY++ G I+ +K +FD +   D VSWNTM
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +TG   C QHG    L +E  +  E+  R  +          +PN I+ + VL  C    
Sbjct: 363 LTG---CAQHG----LGKETLDRFEQMLRIGI----------EPNEISFLCVLTACSHSG 405

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
            L +G        +  +  DV      VD+  + G L+ A R    MP+      W  ++
Sbjct: 406 LLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465

Query: 578 MAYGMHGEGQEVLELLKNM---VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            A  MH          KNM   V    R  E+ P++     L +    S      +    
Sbjct: 466 GACRMH----------KNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVR 515

Query: 635 KMKDDYGIEPSP 646
           KM  + G++  P
Sbjct: 516 KMMKESGVKKQP 527



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 203/396 (51%), Gaps = 12/396 (3%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           + R  + PD   +  +LK    +  +  G+ +HAH+V   +  + + + N +VNMY KCG
Sbjct: 78  IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
             + D  ++FD +  KD V+W ++IA   +  +   AL  F  ML   ++P+ FTL S+ 
Sbjct: 138 C-LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            A  +     GL  G Q+H   L+ G + + ++ +AL+ MYA+ G +D A+  F     +
Sbjct: 197 KASGS---EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
             VSWN ++S  ++  +   A+  L +M  +  +P   + +SV  AC+ +  L+ GK +H
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVH 313

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A+ +++ + +  +F+G+ L+DMY     ++  +RVFD +    +  WN M+TG  Q+   
Sbjct: 314 AHMIKSGLKL-IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372

Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQ 424
           +E L  F +M  + G+ PN  +   V+ AC  S      EG++   +  K  +  D    
Sbjct: 373 KETLDRFEQMLRI-GIEPNEISFLCVLTACSHSGLL--DEGLYYFELMKKYKVEPDVPHY 429

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMI 459
              +D+  R+G ++ ++    +M +  T + W  ++
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 147/260 (56%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   +++N+ R+A+L + +M R  +QP++F   ++LKA      L  G Q+HA  
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KYGY  SSV V + LV+MY +CG  M      FD +  K +VSWN++I+   R G+ + 
Sbjct: 216 LKYGYQ-SSVYVGSALVDMYARCGH-MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEH 273

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL     M   N +P+ FT  SV  AC+++     L  G+ VH + ++ G +   FI N 
Sbjct: 274 ALHLLWKMQRKNFQPTHFTYSSVFSACASIG---ALEQGKWVHAHMIKSGLKLIAFIGNT 330

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G +DDAK +F      D+VSWNT+++  +Q+    E +    QM   GI+P+
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPN 390

Query: 283 GVSIASVLPACSHLEMLDTG 302
            +S   VL ACSH  +LD G
Sbjct: 391 EISFLCVLTACSHSGLLDEG 410



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 2/164 (1%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           A  L   G  T+ + SW   +   AR  +   A+    +M R + QP +F + +V  A A
Sbjct: 242 AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACA 301

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
            I  L  GK +HAH++K G  L +  + NTL++MY K GS + D  +VFDR+ + D VSW
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAF-IGNTLLDMYAKAGS-IDDAKRVFDRLVKPDVVSW 359

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           N+M+    + G     L+ F  ML   +EP+  + + V  ACS+
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSH 403


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 271/843 (32%), Positives = 445/843 (52%), Gaps = 57/843 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L +  R+    EA+  +  M  S   P+ F   + L++ + + +   G +IHA V
Sbjct: 84  SWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASV 143

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  L+ V +  TLV++Y KC   + + +K+   + + D VSW +MI++L    KW  
Sbjct: 144 VKLGLELNHV-LGTTLVDLYTKCDCTV-EPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL+ +  M+ + + P+ FT V +    S L    G   G+ +H   +  G E N  +  A
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGY--GKVLHSQLITFGVEMNLMLKTA 259

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MYAK  R++DA  + +     D+  W +I+S   QN +  EAV  L  M L GI P+
Sbjct: 260 IICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPN 319

Query: 283 GVSIASVLPACSHLEMLDTGKEIHA----YALRNDILIDNSFVGSALVDMYCNCREVEC- 337
             + AS+L A S +  L+ G++ H+      L  DI     +VG+ALVDMY  C      
Sbjct: 320 NFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDI-----YVGNALVDMYMKCSHTTTN 374

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
           G + F  I+   +  W ++I G+ ++ ++EE++ LF +M+  AG+ PN+ T+S+++ AC 
Sbjct: 375 GVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQ-AAGVQPNSFTLSTILGACS 433

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
           + ++    + +HG+ IK  +  D  V NAL+D Y+  G  + + ++   M  RD +++ T
Sbjct: 434 KMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTT 493

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +        Q GD  M LR + +M      N+   +DE          +L + +     L
Sbjct: 494 LAARLN---QQGDHEMALRVITHM-----CNDEVKMDE---------FSLASFISAAAGL 536

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
             +  GK++H Y+ ++       V ++LV  Y+KCG +  A RVF  +   + ++WN +I
Sbjct: 537 GIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLI 596

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
                +G   + L    +M   G     VKP+ VTF++L  ACS   ++++G+D FY M+
Sbjct: 597 SGLASNGLISDALSAFDDMRLAG-----VKPDSVTFLSLIFACSQGSLLNQGLDYFYSME 651

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
             Y I P  DHY C+VDLLGR G++E+A  +I  MP + D    + +LL AC +H NV +
Sbjct: 652 KTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSV-IYKTLLNACNLHGNVPL 710

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           GE  A+    L+P   + Y+LL+++Y +A L D     RK M+E G+R+ P   W+E   
Sbjct: 711 GEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKS 770

Query: 758 EIHKFLAGD--GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
           +I+ F A +  G+ + +E+    LE+L   ++  GY            +E ++ L   HS
Sbjct: 771 KIYLFSAREKIGNDEINEK----LESLITEIKNRGY----------PYQESEDKLY--HS 814

Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
           E+LA+AFG+L+ P    IR+ KN  +C  CH     +++   REII+RD +RFH FK+G 
Sbjct: 815 EQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQ 874

Query: 876 CSC 878
           CSC
Sbjct: 875 CSC 877



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 175/659 (26%), Positives = 312/659 (47%), Gaps = 44/659 (6%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           Q L  G  +H+ ++K G     + ++N L+ +Y KC   +     +FD +  +D VSW +
Sbjct: 30  QTLKEGACVHSPIIKVGLQ-HDLYLSNNLLCLYAKCFG-VGQARHLFDEMPHRDVVSWTT 87

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           +++   R      AL+ F MML S   P+ FTL S   +CS L        G ++H + +
Sbjct: 88  LLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGE---FEFGAKIHASVV 144

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           ++G E N  +   L+ +Y K     +   L    +D D+VSW T++SSL +  K+ EA+ 
Sbjct: 145 KLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQ 204

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALVDM 328
              +M   GI P+  +   +L   S L +    GK +H+  +   + + N  + +A++ M
Sbjct: 205 LYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEM-NLMLKTAIICM 263

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  CR +E   +V        + LW ++I+G+ QN    EA+   + M E++G+ PN  T
Sbjct: 264 YAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDM-ELSGILPNNFT 322

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT-IFDDM 447
            +S++ A     +    E  H   I +GL  D YV NAL+DMY +      +    F  +
Sbjct: 323 YASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGI 382

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
            + + +SW ++I G+   G   +++ L  EMQ                     +PNS TL
Sbjct: 383 ALPNVISWTSLIAGFAEHGFEEESVQLFAEMQ-----------------AAGVQPNSFTL 425

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            T+L  C  + ++ + K++H Y I+  +  D+ VG+ALVD YA  G  + A  V  +M  
Sbjct: 426 STILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNH 485

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R++IT+  +       G+ +  L ++ +M  +     EVK +E +  +  +A +  G++ 
Sbjct: 486 RDIITYTTLAARLNQQGDHEMALRVITHMCND-----EVKMDEFSLASFISAAAGLGIME 540

Query: 628 EGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            G  L  Y  K   G E        +V    + G + DAY++   +  E D+  +W+ L+
Sbjct: 541 TGKQLHCYSFKS--GFERCNSVSNSLVHSYSKCGSMRDAYRVFKDI-TEPDRV-SWNGLI 596

Query: 687 GACRIHQNVEIGEIAAQNLFL--LEPDVASHYVLLSNIYSSAQ--LWDKAMDVRKKMKE 741
                +  +     A  ++ L  ++PD  +    LS I++ +Q  L ++ +D    M++
Sbjct: 597 SGLASNGLISDALSAFDDMRLAGVKPDSVT---FLSLIFACSQGSLLNQGLDYFYSMEK 652



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 232/492 (47%), Gaps = 44/492 (8%)

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +L     L+ G  VH   ++VG + + ++ N L+ +YAK   V  A+ LF     RD+VS
Sbjct: 25  SLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVS 84

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           W T++S+ ++N    EA+     M   G  P+  +++S L +CS L   + G +IHA  +
Sbjct: 85  WTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVV 144

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +  + + N  +G+ LVD+Y  C       ++  F+ D  +  W  MI+   +     EAL
Sbjct: 145 KLGLEL-NHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEAL 203

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--------IHGHAIKLGLGRDRY 422
            L++KM E AG++PN  T        V+    P   G        +H   I  G+  +  
Sbjct: 204 QLYVKMIE-AGIYPNEFTF-------VKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           ++ A++ MY++  R+E +  +       D   W ++I+G+               +QN +
Sbjct: 256 LKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGF---------------VQNSQ 300

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
             +  N + D++ + +   PN+ T  ++L    ++ +L  G++ H+  I   L  D+ VG
Sbjct: 301 VREAVNALVDMELSGIL--PNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVG 358

Query: 543 SALVDMYAKCG-CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
           +ALVDMY KC        + F  + + NVI+W  +I  +  HG  +E ++L   M A G 
Sbjct: 359 NALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAG- 417

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAG 660
               V+PN  T   +  ACS    + +   L  Y +K    I+ +  +   +VD     G
Sbjct: 418 ----VQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGN--ALVDAYAGGG 471

Query: 661 KVEDAYQLINMM 672
             ++A+ +I MM
Sbjct: 472 MADEAWSVIGMM 483


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/709 (33%), Positives = 380/709 (53%), Gaps = 72/709 (10%)

Query: 221  NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            N L+ +YAK   ++ A  +F+     D+ SW  ++S  ++     + +    +M  +G+ 
Sbjct: 325  NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384

Query: 281  PDGVSIASVLPACS-HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            P+  +++ VL +CS ++     GK IH + LRN + +D + + ++++D Y  CR      
Sbjct: 385  PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLD-AVLNNSILDYYVKCRCFGYAE 443

Query: 340  RVFDFISDKKI-------------------------------ALWNAMITGYGQNEYDEE 368
            ++F  +++K                                 A WN MI G  +N  +  
Sbjct: 444  KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503

Query: 369  ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
            AL L  KM   AG   N  T S  +            + IH   +K+G+  D +V+N+L+
Sbjct: 504  ALELLYKMV-AAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLI 562

Query: 429  DMYSRMGRIEISKTIFD---------------DMEVRDTVSWNTMITGYTICGQHGDALM 473
            DMY + G +E +  IF                D  V ++VSW++M++GY   G+  DAL 
Sbjct: 563  DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622

Query: 474  LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
                M   + E ++                  TL +V+  C +   L  G+++H Y  + 
Sbjct: 623  TFSFMICSQVEVDK-----------------FTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 534  MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
                DV +GS+++DMY KCG LN A  +F+    RNV+ W  +I    +HG+G+E + L 
Sbjct: 666  GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 594  KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
            + M+ EG     + PNEV+F+ +  ACSH+G++ EG   F  M++ YGI P  +H+ C+V
Sbjct: 726  ELMINEG-----ITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMV 780

Query: 654  DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
            DL GRAG++ +  + I+        +  W S L +CR+H+N+E+G    + L  LEP  A
Sbjct: 781  DLYGRAGRLNEIKEFIHNNAIS-KLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDA 839

Query: 714  SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
              Y+L S+I ++   W++A  +R  M++ GV+K P  SWI+  +++H F+ GD SH Q  
Sbjct: 840  GPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDT 899

Query: 774  QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
            +++ +L+ L  R+++ GY  D + V+ +V +E+++ LL  HSEKLAIA+GI++T PGT I
Sbjct: 900  KIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPI 959

Query: 834  RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            RV KNLRVC DCH   K+ S++  REII+RD+ RFHHFK+G CSC DYW
Sbjct: 960  RVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 229/511 (44%), Gaps = 83/511 (16%)

Query: 99  IHAHVVKYG-YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +HA ++K G  G+      N L+N+Y K   ++   +K+F+ I + D  SW  +I+   R
Sbjct: 310 LHAKLIKNGCVGIR----GNHLLNLYAK-SQNLEQAHKMFEEIPQTDVFSWTVLISGFAR 364

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG---- 213
            G     L  F  M    V P+ FTL  V  +CS  S  +  R+G+ +HG  LR G    
Sbjct: 365 IGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS--SNVNDSRIGKGIHGWILRNGLDLD 422

Query: 214 ----------------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
                                       E +T   N +M+ Y ++G +  +  LF+    
Sbjct: 423 AVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPG 482

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +D  SWNT++  L +N     A+  L +M   G   + ++ +  L   S L +L  GK+I
Sbjct: 483 KDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQI 542

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL------------- 352
           H   L+  +L D+ FV ++L+DMYC C E+E    +F  +  +   +             
Sbjct: 543 HTQVLKVGVL-DDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVES 601

Query: 353 --WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
             W++M++GY QN   E+AL  F  M   + +  +  T++SVV AC  +        +HG
Sbjct: 602 VSWSSMVSGYVQNGRFEDALKTFSFM-ICSQVEVDKFTLTSVVSACASAGVLELGRQVHG 660

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           +  K+G G D ++ ++++DMY + G +  +  IF+  + R+ V W +MI+G  + GQ  +
Sbjct: 661 YIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGRE 720

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI---- 526
           A+ L   M N              E +    PN ++ + VL  C     L +G +     
Sbjct: 721 AVRLFELMIN--------------EGI---TPNEVSFVGVLTACSHAGLLEEGCKYFRLM 763

Query: 527 -HAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
              Y IR          + +VD+Y + G LN
Sbjct: 764 REVYGIR----PGAEHFTCMVDLYGRAGRLN 790



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 217/468 (46%), Gaps = 59/468 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG-IQDLSLGKQIHAH 102
           SW   +   AR     + +  + +M    + P+ F    VLK+ +  + D  +GK IH  
Sbjct: 354 SWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGW 413

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +++ G  L +V + N++++ Y KC    +   K+F  + EKD VSWN M+++  + G   
Sbjct: 414 ILRNGLDLDAV-LNNSILDYYVKCRCFGY-AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQ 471

Query: 163 LALEAFRM---------------------------MLYSNVEPS-SFTLVSVALACSNLS 194
            +++ FR                            +LY  V    +F  ++ ++A    S
Sbjct: 472 KSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLAS 531

Query: 195 RRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDR------- 246
               L LG+Q+H   L+VG  +  F+ N+L+ MY K G ++ A  +FK            
Sbjct: 532 SLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSE 591

Query: 247 --------DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
                   + VSW+++VS   QN +F +A+     M    ++ D  ++ SV+ AC+   +
Sbjct: 592 ESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGV 651

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L+ G+++H Y  +    +D  F+GS+++DMY  C  +     +F+   D+ + LW +MI+
Sbjct: 652 LELGRQVHGYIQKIGHGLD-VFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMIS 710

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-----IHGHAI 413
           G   +    EA+ LF  M    G+ PN  +   V+ AC  S A   +EG     +     
Sbjct: 711 GCALHGQGREAVRLFELMIN-EGITPNEVSFVGVLTAC--SHAGLLEEGCKYFRLMREVY 767

Query: 414 KLGLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNTMIT 460
            +  G + +    ++D+Y R GR+ EI + I ++   + +  W + ++
Sbjct: 768 GIRPGAEHF--TCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLS 813



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 24/285 (8%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           LPG       SW   +    R+   R A+    +M  +    +   F   L   + +  L
Sbjct: 480 LPGKDA---ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVL 536

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK---------- 143
            LGKQIH  V+K G  L    V N+L++MY KCG +M     +F  + ++          
Sbjct: 537 GLGKQIHTQVLKVGV-LDDGFVRNSLIDMYCKCG-EMEKASVIFKHLPQESSMMNSEESC 594

Query: 144 -----DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
                + VSW+SM++   + G+++ AL+ F  M+ S VE   FTL SV  AC++      
Sbjct: 595 DDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGV--- 651

Query: 199 LRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L LGRQVHG   ++G   + F+ ++++ MY K G ++DA  +F   +DR++V W +++S 
Sbjct: 652 LELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISG 711

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            + + +  EAV     M   GI P+ VS   VL ACSH  +L+ G
Sbjct: 712 CALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 19/119 (15%)

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +HA  I+N      + G+ L+++YAK   L  A ++F+ +P  +V +W V+I  +   G 
Sbjct: 310 LHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS------------HSGMVSEGMDL 632
             +VL L   M  +G     V PN+ T   +  +CS            H  ++  G+DL
Sbjct: 368 SADVLGLFTKMQDQG-----VCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDL 421


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 420/797 (52%), Gaps = 45/797 (5%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDM-WDVYKVFDRITEKDQVSWNSMIATLCR 157
           +HAH+ +  +  +S+ + N+L+  Y + G        ++ D +  ++ VS+N +I++  R
Sbjct: 21  VHAHIAR-AHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSR 79

Query: 158 FGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
            G    ALE F     +  +    FT  +   ACS   R   LR G+ VH  ++  G  N
Sbjct: 80  AGLPGRALETFARARAAAGLRVDRFTYAAALAACS---RALDLRTGKAVHAMTVLDGLGN 136

Query: 217 -TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+ N+L +MYA  G + +A+ +F + E+ D VSWN+++S   +     E +     M 
Sbjct: 137 GVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMC 196

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEI----HAYALRNDILIDNSFVGSALVDMYCN 331
             G+  +  ++ S++  C+     D G+ I    H   ++  +  D  F+ SA++DMY  
Sbjct: 197 HHGLGWNSFALGSIIKCCASGS--DVGRHIAEAVHGCVVKAGLDAD-LFLASAMIDMYAK 253

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNE------YDEEALMLFIKMEEVAGLWPN 385
              +     +F  + D  + ++NAMI G+ ++E         EAL L+ +M+   G+ P+
Sbjct: 254 RGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQS-RGMQPS 312

Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
             T SS++ AC  +  F   + IHG  +K     D Y+ +AL+D+YS  G +E     F 
Sbjct: 313 EFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFR 372

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            +  +D V+W +MI+G         AL L +E          +  Y L       KP+  
Sbjct: 373 SLPKQDIVTWTSMISGCVQNELFEKALRLFQE----------SICYGL-------KPDLF 415

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T+ +V+  C +L+    G++I   AI+        +G++ + M A+ G ++   R F  M
Sbjct: 416 TMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEM 475

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
             R+V++W+ +I ++  HG  ++ L +   M+       +V PNEVTF+ +  ACSH G+
Sbjct: 476 ESRDVVSWSAVISSHAQHGCARDALRIFNEMM-----NAKVAPNEVTFLNVLTACSHGGL 530

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V +G+  +  MK++YG+ P+  H  CVVDLLGRAG++ DA   I       D A  W SL
Sbjct: 531 VDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRD-SAFHDDAVVWRSL 589

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           L +CRIH ++E G++ A  +  LEP  ++ YV+L N+Y  A     A   R  MKE GV+
Sbjct: 590 LASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVK 649

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           KEPG SWIE    +H F+AGD SH +S  ++  L  +  ++ K     + S     ++  
Sbjct: 650 KEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSS 709

Query: 806 EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
           E+  + C HSEK+A+AFG+++ P    IRV KNLRVC DCH   K IS  E+REIILRD 
Sbjct: 710 EQNLVGC-HSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDG 768

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFHHF+ G+CSCGDYW
Sbjct: 769 IRFHHFRGGSCSCGDYW 785



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 233/450 (51%), Gaps = 31/450 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++ D F + A L A +   DL  GK +HA  V  G G + V ++N+L +MY  CG +M +
Sbjct: 99  LRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLG-NGVFLSNSLASMYASCG-EMGE 156

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
             +VFD   E D VSWNS+++   R G  +  L+ F +M +  +  +SF L S+   C++
Sbjct: 157 ARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCAS 216

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            S   G  +   VHG  ++ G + + F+ +A++ MYAK G + +A  LFKS  D +++ +
Sbjct: 217 GSDV-GRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVF 275

Query: 252 NTIVSSLSQNDKFL------EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           N +++   +++  +      EA+    +M  RG++P   + +S+L AC+       GK+I
Sbjct: 276 NAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQI 335

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H   L++    D+ ++GSAL+D+Y +   +E G R F  +  + I  W +MI+G  QNE 
Sbjct: 336 HGQVLKHS-FHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNEL 394

Query: 366 DEEALMLFIKMEEVA-GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
            E+AL LF   E +  GL P+  TMSSV+ AC         E I   AIK G  R   + 
Sbjct: 395 FEKALRLF--QESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMG 452

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N+ + M +R G ++     F +ME RD VSW+ +I+ +   G   DAL +  EM N    
Sbjct: 453 NSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNA--- 509

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
                         +  PN +T + VL  C
Sbjct: 510 --------------KVAPNEVTFLNVLTAC 525



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%), Gaps = 8/246 (3%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           REA+  Y EM    +QP  F F ++L+A     +   GKQIH  V+K+ +      + + 
Sbjct: 295 REALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFH-DDDYIGSA 353

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L+++Y   G  M D Y+ F  + ++D V+W SMI+   +   ++ AL  F+  +   ++P
Sbjct: 354 LIDLYSDSGC-MEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKP 412

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDA 236
             FT+ SV  AC++L+     R G Q+   +++ G +N F    N+ + M A+ G VD  
Sbjct: 413 DLFTMSSVMNACASLAV---ARTGEQIQCLAIKYG-FNRFTAMGNSFIHMCARSGDVDAV 468

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
              F+  E RD+VSW+ ++SS +Q+    +A+    +M    + P+ V+  +VL ACSH 
Sbjct: 469 TRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHG 528

Query: 297 EMLDTG 302
            ++D G
Sbjct: 529 GLVDDG 534



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 20/203 (9%)

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG---RIEISKTIFDDMEVRDTVSWNT 457
           A P    +H H  +       +++N+L+  Y R+G    +  ++ I D+M  R+ VS+N 
Sbjct: 14  ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLI-DEMPRRNAVSYNL 72

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I+ Y+  G  G AL                  +         + +  T    L  C   
Sbjct: 73  LISSYSRAGLPGRAL----------------ETFARARAAAGLRVDRFTYAAALAACSRA 116

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
             L  GK +HA  + + L   V + ++L  MYA CG +  ARRVFD     + ++WN ++
Sbjct: 117 LDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLL 176

Query: 578 MAYGMHGEGQEVLELLKNMVAEG 600
             Y   G  +E L++   M   G
Sbjct: 177 SGYVRAGAREETLKVFSLMCHHG 199



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  F +A+  + E     ++PD F   +V+ A A +     G+QI    
Sbjct: 381 TWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLA 440

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KYG+      + N+ ++M  + G D+  V + F  +  +D VSW+++I++  + G    
Sbjct: 441 IKYGFN-RFTAMGNSFIHMCARSG-DVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARD 498

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLR---LGRQVHGNSLRVGEWNTFI 219
           AL  F  M+ + V P+  T ++V  ACS+     DGLR   + +  +G S  +       
Sbjct: 499 ALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKH----- 553

Query: 220 MNALMAMYAKLGRVDDAKTLFK--SFEDRDLVSWNTIVSS 257
           +  ++ +  + GR+ DA+   +  +F D D V W ++++S
Sbjct: 554 VTCVVDLLGRAGRLADAEAFIRDSAFHD-DAVVWRSLLAS 592


>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 346/584 (59%), Gaps = 28/584 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFISDKKIALWNAMITG 359
           ++IHA  L + + I +   G   +  +C      +++  R++F  I    I  WN+MI G
Sbjct: 5   RQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIRG 64

Query: 360 YGQNEY-DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
             Q++   +E ++LF KM       PN  TM+ V+ AC    A  + + +H + +K G G
Sbjct: 65  CSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG 124

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
              +V+ AL++ Y++   I ++  +FD++  R+ V+W+TMI+GY   G   +AL L R+M
Sbjct: 125 SSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDM 184

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q       +  V           P+ +T+++V+  C A  AL  GK +HAY  + ++ TD
Sbjct: 185 Q-------KAGVV----------PDEVTMVSVISACAASGALDTGKWVHAYINKQLIETD 227

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           + + +ALV+MYAKCGC+  A+ VFD MPV++   W+ +I+   ++G  ++ LE    M  
Sbjct: 228 LELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRM-- 285

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
                 +VKPN VTFI + +AC+HSG+VSEG   +  M + +GI PS + Y C+VDLL R
Sbjct: 286 ---EEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCR 341

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           A  VEDA  L+  MP   +    W +LL  C+  +N++  E+ AQ L  LEP  A +Y+L
Sbjct: 342 ASLVEDACTLVETMPISPNPV-IWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYIL 400

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN+Y+S   W+K   VRKKMK MG++  PGCS IE    +H+F+ GD SH ++ ++   
Sbjct: 401 LSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREI 460

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L ++S+R+   G+ P  S VLHNV +EEKE  LC HSE+LAIA+G+L T     IR+ KN
Sbjct: 461 LRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKN 520

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH+ TK IS    REII+RD  RFH F NG+CSC D+W
Sbjct: 521 LRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 191/378 (50%), Gaps = 25/378 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG----SDMWDVYKVFDRITEKDQVSWNSMI 152
           +QIHA ++ +   +SS++    L  + G C      D+    K+F +I   +  SWNSMI
Sbjct: 5   RQIHARLLTHAMPISSISFG--LCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMI 62

Query: 153 ATLCRF---GKWDLALEAFRMML---YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
               +     K  + L  FR M+   Y N  P++FT+  V  ACS +S    L  G+QVH
Sbjct: 63  RGCSQSQTPSKEPVIL--FRKMVRRGYPN--PNTFTMAFVLKACSIVS---ALEEGQQVH 115

Query: 207 GNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            N L+ G  ++ F+  AL+  YAK   +  A  +F    DR+LV+W+T++S  ++     
Sbjct: 116 ANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVN 175

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSA 324
           EA+   R M   G+ PD V++ SV+ AC+    LDTGK +HAY   N  LI+    + +A
Sbjct: 176 EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYI--NKQLIETDLELSTA 233

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           LV+MY  C  +E  + VFD +  K    W++MI G   N   E+AL  F +MEE A + P
Sbjct: 234 LVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEE-AKVKP 292

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  T   V+ AC  S    +        ++ G+     +   ++D+  R   +E + T+ 
Sbjct: 293 NHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLV 352

Query: 445 DDMEVR-DTVSWNTMITG 461
           + M +  + V W T++ G
Sbjct: 353 ETMPISPNPVIWRTLLVG 370



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 155/296 (52%), Gaps = 9/296 (3%)

Query: 44  SWIESLRSEARSNQ-FREAILSYIEMTRSDI-QPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW   +R  ++S    +E ++ + +M R     P+ F    VLKA + +  L  G+Q+HA
Sbjct: 57  SWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHA 116

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           +V+K G+G SS  V   LVN Y KC  D+    KVFD IT+++ V+W++MI+   R G  
Sbjct: 117 NVLKSGFG-SSPFVETALVNFYAKC-EDIVLASKVFDEITDRNLVAWSTMISGYARIGLV 174

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIM 220
           + AL  FR M  + V P   T+VSV  AC+       L  G+ VH   + ++ E +  + 
Sbjct: 175 NEALGLFRDMQKAGVVPDEVTMVSVISACAA---SGALDTGKWVHAYINKQLIETDLELS 231

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+ MYAK G ++ AK +F +   +D  +W++++  L+ N    +A+    +M    +K
Sbjct: 232 TALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVK 291

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           P+ V+   VL AC+H  ++  G+   +  L   I+      G  +VD+ C    VE
Sbjct: 292 PNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVE 346


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/614 (38%), Positives = 352/614 (57%), Gaps = 37/614 (6%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC---NCREVECGRRVFDFIS 346
           L +CS +  L   K+ H+  +R  +  DN  +G  +   +C      ++     VFD I 
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVI--KFCAISKSGDLNYALEVFDKIP 81

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
                ++N +  GY + +     + ++ +M   + + PN  T   ++ AC    A  + +
Sbjct: 82  HPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKS-VSPNKFTYPPLIRACCIDYAIEEGK 140

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH H +K G G D +  N L+ MY     +E ++ +FD+M  RD VSW ++ITGY+  G
Sbjct: 141 QIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWG 200

Query: 467 QHGDALMLLREMQNMEEEKNR-------------NNVYDLDETVLRPKPNSITL-----M 508
               A    RE+  +  E+N              N +++      R +  ++ L      
Sbjct: 201 FVDKA----REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           ++L  C  L AL +GK IH Y  ++ +  D  + + ++DMY KCGCL  A  VF+ +P +
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
            + +WN +I    MHG+G+  +EL K M  E      V P+ +TF+ + +AC+HSG+V E
Sbjct: 317 GISSWNCMIGGLAMHGKGEAAIELFKEMERE-----MVAPDGITFVNVLSACAHSGLVEE 371

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G   F  M +  G++P  +H+ C+VDLLGRAG +E+A +LIN MP   D AG   +L+GA
Sbjct: 372 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD-AGVLGALVGA 430

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CRIH N E+GE   + +  LEP  +  YVLL+N+Y+SA  W+    VRK M + GV+K P
Sbjct: 431 CRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAP 490

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G S IE    + +F+AG  +H Q+++++  L+ + E +R  GYVPDT  VLH+++EEEKE
Sbjct: 491 GFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKE 550

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
             L  HSEKLAIAFG+L T PG T+R++KNLR+C DCHQA+K ISK+  REII+RD  RF
Sbjct: 551 NPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRF 610

Query: 869 HHFKNGTCSCGDYW 882
           HHF+ G CSC DYW
Sbjct: 611 HHFRMGGCSCKDYW 624



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 182/410 (44%), Gaps = 46/410 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ H+ +++ G    +  +   +         D+    +VFD+I   D   +N++     
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 157 RFGKWDLALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
           R   W LA     M   ML+ +V P+ FT   +  AC        +  G+Q+H + L+ G
Sbjct: 97  R---WQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC---IDYAIEEGKQIHAHVLKFG 150

Query: 214 -EWNTFIMNALMAMY-------------------------------AKLGRVDDAKTLFK 241
              + F +N L+ MY                               ++ G VD A+ +F+
Sbjct: 151 FGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210

Query: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
              +R+ VSWN ++++  Q+++  EA     +M L  +  D    AS+L AC+ L  L+ 
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK IH Y  ++ I +D S + + ++DMYC C  +E    VF+ +  K I+ WN MI G  
Sbjct: 271 GKWIHGYIEKSGIELD-SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 329

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRD 420
            +   E A+ LF +ME    + P+  T  +V+ AC  S    + +    +  + LGL   
Sbjct: 330 MHGKGEAAIELFKEMEREM-VAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPG 388

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
                 ++D+  R G +E ++ + ++M V         + G   C  HG+
Sbjct: 389 MEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVG--ACRIHGN 436



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 35/291 (12%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
            R   R    R  I  Y  M    + P+ F +P +++A      +  GKQIHAHV+K+G+
Sbjct: 92  FRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGF 151

Query: 109 GLSSVTVANTLVNMYGK--------------------------CGSDMW----DVYKVFD 138
           G    ++ N L++MY                             G   W       +VF+
Sbjct: 152 GADGFSL-NNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
            + E++ VSWN+MIA   +  +   A   F  M   NV    F   S+  AC+ L     
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLG---A 267

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L  G+ +HG   + G E ++ +   ++ MY K G ++ A  +F     + + SWN ++  
Sbjct: 268 LEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGG 327

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           L+ + K   A+   ++M    + PDG++  +VL AC+H  +++ GK    Y
Sbjct: 328 LAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQY 378



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 200/479 (41%), Gaps = 60/479 (12%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q H   +R+G   +   M  ++   A  K G ++ A  +F      D   +NTI     
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +       +    +M  + + P+  +   ++ AC     ++ GK+IHA+ L+     D  
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGAD-G 155

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           F  + L+ MY N + +E  RRVFD +  + +  W ++ITGY Q  + ++A  +F  M E 
Sbjct: 156 FSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPER 215

Query: 380 AGLWPNAT------------------------------TMSSVVPACVRSEAFPDKEGIH 409
             +  NA                                 +S++ AC    A    + IH
Sbjct: 216 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 275

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G+  K G+  D  +   ++DMY + G +E +  +F+++  +   SWN MI G  + G+  
Sbjct: 276 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 335

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
            A+ L +EM+               E V    P+ IT + VL  C     + +GK    Y
Sbjct: 336 AAIELFKEMER--------------EMV---APDGITFVNVLSACAHSGLVEEGKHYFQY 378

Query: 530 AIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
               + L   +     +VD+  + G L  AR++ + MPV  +      ++ A  +HG  +
Sbjct: 379 MTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 438

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
              ++ K ++       E++P+      L A    S    E +    K+ +D G++ +P
Sbjct: 439 LGEQIGKKVI-------ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAP 490



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +SN+  EA   +  M   ++  D F   ++L A  G+  L  GK IH ++
Sbjct: 219 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 278

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G  L S  +A T+++MY KCG  +    +VF+ + +K   SWN MI  L   GK + 
Sbjct: 279 EKSGIELDS-KLATTVIDMYCKCGC-LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 336

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A+E F+ M    V P   T V+V  AC++
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAH 365


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 268/817 (32%), Positives = 409/817 (50%), Gaps = 75/817 (9%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
            SL + +HAH++  G+        N L+ MY K  S++    ++F+ I   D ++  ++I
Sbjct: 29  FSLARAVHAHMIASGFKPRG-HFLNRLLEMYCK-SSNLVYARQLFEEIPNPDAIARTTLI 86

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
              C  G                                       L LGR++  N   +
Sbjct: 87  TAYCALGN--------------------------------------LELGREIF-NGTPL 107

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN-TIVSSLSQNDKFLEAVMFL 271
              ++   NA++  YA  G    A  LF++    D    + T  S LS    F+      
Sbjct: 108 YMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQC 167

Query: 272 RQMALRGIKPD-GVSIASVLPACSHLEM-------LDTGKEIHAYALRNDILIDNSFVGS 323
            QM    +K   G   +SVL A   + +       +     + A  L +++   +    +
Sbjct: 168 GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWT 227

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
            ++  Y    ++   R VF+ + +   A WNAMI+GY      +EAL L  KM  + G+ 
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFL-GIQ 286

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY----VQNALMDMYSRMGRIEI 439
            +  T ++++ AC    +F   + +H + +K  L  +      V NAL+ +Y +  +++ 
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM--------QNMEEEKNRNNVY 491
           ++ IF  M VR+ ++WN +++GY   G+  +A     EM          M     +N   
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406

Query: 492 DLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           D    + +       +P        L  C  L AL  G+++HA  +     + + VG+A+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + MYAKCG +  A  VF  MP  ++++WN +I A G HG G + +EL   M+ EG     
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG----- 521

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           V P+ +TF+ +  ACSH+G+V +G   F  M + YGI P  DHYA +VDL  RAG    A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             +I+ MP +   A  W +LL  CRIH N+++G  AA+ LF L P     YVLLSNIY+ 
Sbjct: 582 RIVIDSMPSK-PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYAD 640

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
              W++   VRK M++  VRKEP CSWIE  +++H F+  D  H +   ++ +LE L   
Sbjct: 641 VGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLE 700

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           M+K GY+PDT  VLH++  E+KE  L  HSEKLA+ FGI+  PPG T+RV KN+R+C DC
Sbjct: 701 MKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDC 760

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H A KF+SK+  REII+RD +RFHHFKNG CSC DYW
Sbjct: 761 HNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 218/485 (44%), Gaps = 95/485 (19%)

Query: 68  MTRSDIQPDNFAFPAVLKA-VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M R D +PD+F F +VL A V  + +     Q+H  VVK G G  S +V N L+++Y K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 127 GSD-------MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF----------- 168
            S+       M    K+FD + ++D+++W +MI    R    + A E F           
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 169 --------------------RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
                               R M +  ++    T  ++  AC+N+      ++G+QVH  
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVG---SFQMGKQVHAY 314

Query: 209 SLR--VGEWNTF---IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI--------- 254
            L+  +   ++F   + NAL+ +Y K  +VD+A+ +F +   R++++WN I         
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGR 374

Query: 255 ----------------------VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
                                 +S L+QN    E +   +QM L G +P   + A  L A
Sbjct: 375 MEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTA 434

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           CS L  L+ G+++HA  +   +  ++S  VG+A++ MY  C  VE    VF  +    + 
Sbjct: 435 CSVLGALENGRQLHAQLVH--LGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG- 410
            WN+MI   GQ+ +  +A+ LF +M +  G++P+  T  +V+ AC  S A   ++G H  
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLK-EGVFPDRITFLTVLTAC--SHAGLVEKGRHYF 549

Query: 411 ----HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTIC 465
                +  +    D Y +  ++D++ R G    ++ + D M  +     W  ++ G   C
Sbjct: 550 NSMLESYGITPCEDHYAR--MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG---C 604

Query: 466 GQHGD 470
             HG+
Sbjct: 605 RIHGN 609



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 46/355 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +        F+EA+    +M    IQ D+  +  ++ A A +    +GKQ+HA++
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYI 315

Query: 104 VK------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS------- 150
           +K      + + LS   V+N L+ +Y K  + + +  K+F  +  ++ ++WN+       
Sbjct: 316 LKNELNPNHSFCLS---VSNALITLYCK-NNKVDEARKIFYAMPVRNIITWNAILSGYVN 371

Query: 151 ------------------------MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
                                   MI+ L + G  D  L+ F+ M     EP  F     
Sbjct: 372 AGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGA 431

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             ACS L     L  GRQ+H   + +G E +  + NA+++MYAK G V+ A+++F +   
Sbjct: 432 LTACSVLG---ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            DLVSWN+++++L Q+   ++A+    QM   G+ PD ++  +VL ACSH  +++ G+  
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA-LWNAMITG 359
               L +  +       + +VD++C        R V D +  K  A +W A++ G
Sbjct: 549 FNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 160/414 (38%), Gaps = 98/414 (23%)

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +F     +H H I  G     +  N L++MY +   +  ++ +F+++   D ++  T+IT
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVY------------------DLDETVLRP-- 500
            Y   G     L L RE+ N      R++V+                  +L   + R   
Sbjct: 88  AYCALGN----LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDF 143

Query: 501 KPNSITLMTVLPGCGALSALAKGKE-----IHAYAIRN-MLATDVVVGSALVDMYAK--- 551
           +P+  T  +VL        L  G E     +H   ++  M      V +AL+ +Y K   
Sbjct: 144 RPDDFTFTSVLSAL----VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRAS 199

Query: 552 -----CGCLNFARRVFDLMPVRNVIT-------------------------------WNV 575
                C  +  AR++FD MP R+ +T                               WN 
Sbjct: 200 ELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-Y 634
           +I  Y   G  QE L L + M   G     ++ +++T+  + +AC++ G    G  +  Y
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLG-----IQFDDITYTTIISACANVGSFQMGKQVHAY 314

Query: 635 KMKDDYGIEPSPDHYAC------VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            +K+    E +P+H  C      ++ L  +  KV++A ++   MP        W+++L  
Sbjct: 315 ILKN----ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSG 368

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ--LWDKAMDVRKKMK 740
                 V  G +     F  E  V +   L   I   AQ    D+ + + K+M+
Sbjct: 369 -----YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/717 (34%), Positives = 397/717 (55%), Gaps = 34/717 (4%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           + N +++M  + G ++W  ++VF ++ E+D  SWN M+    + G  + AL+ +  ML++
Sbjct: 133 LGNAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRV 233
            + P  +T   V   C  +      R+GR+VH + LR G  +   ++NAL+ MYAK G +
Sbjct: 192 GMRPDVYTFPCVLRTCGGIP---DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+ +F      D +SWN +++   +N +    +     M    ++P+ ++I SV  A 
Sbjct: 249 VAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
             L  +   KE+H +A++    ID +F  S L+ MY +   +    ++F  +  K    W
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNS-LIQMYTSLGRMGDAGKIFSRMETKDAMSW 367

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            AMI+GY +N + ++AL ++  ME +  + P+  T++S + AC           +H  A 
Sbjct: 368 TAMISGYEKNGFPDKALEVYALME-LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
             G  R   V NAL++MY++   I+ +  +F  M  +D VSW++MI G+    +  +AL 
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALY 486

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
             R M                      KPNS+T +  L  C A  AL  GKEIHAY +R 
Sbjct: 487 YFRYMLG------------------HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
            + ++  V +AL+D+Y KCG  ++A   F +   ++V++WN+++  +  HG G   L L 
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             MV  G       P+EVTF+AL  ACS +GMV +G +LF+ M + + I P+  HYAC+V
Sbjct: 589 NQMVEMGEH-----PDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMV 643

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLL R GK+ +AY LIN MP + D A  W +LL  CRIH++VE+GE+AA+ +  LEP+  
Sbjct: 644 DLLSRVGKLTEAYNLINRMPIKPD-AAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
           +++VLL ++Y+ A  W +   VRK M+E G+ ++ GCSW+E     H FL  D SH Q +
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIK 762

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
           +++  L  + ERM+  G+ P  S     V+E++   +LCGHSE+LA+AFG++NT PG
Sbjct: 763 EINVVLHGIYERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLINTTPG 816


>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/584 (38%), Positives = 346/584 (59%), Gaps = 29/584 (4%)

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +H     + +   + F+ + L++ Y     +   R+VFD    K I +WNA++      +
Sbjct: 94  VHRRLEADPVFRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALAD 153

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACV-----RSEAFPDKEGIHGHAIKLGLGR 419
           + +EAL     M  + G+  ++ + +  + AC+      + A      +H HAI+ G   
Sbjct: 154 HGDEALARLADMGRL-GVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYAL 212

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
             +V   L+D Y+++G +  ++++F  M  R+ VSW+ MI  Y    +  DA+ L ++M 
Sbjct: 213 HTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMM 272

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                       D D       PNSIT+++VL  C  ++AL+ GK +HAY +R    + V
Sbjct: 273 ----------ASDADLV-----PNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLV 317

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
            V +AL+ MY +CGCL   R +F  +   R+V++WN +I  YGMHG G E +++ + M+ 
Sbjct: 318 SVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIH 377

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G       P+ +TFI++  ACSH+G+V+EG  LF  M + YG+ P  +HYAC+VDLLGR
Sbjct: 378 VG-----FSPSIITFISVLGACSHAGLVNEGKMLFESMVE-YGVTPRAEHYACMVDLLGR 431

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG++++A +LI  M  E      W +LLGACRIH +VE  EIA  +LF LEP  A +YVL
Sbjct: 432 AGQLDEAMELIRSMHIE-PSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVL 490

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           L++IY+ A+L ++   +++ ++E  + K  GCSWIE   ++H F + D  +   EQL   
Sbjct: 491 LADIYARAKLHNQVGVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQAL 550

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           +     +M+ +GYVPDT  VL+++  EEKE +L GHSEKLA+AFG++NT  G  IR+ KN
Sbjct: 551 IGEFVAQMKNQGYVPDTGIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKN 610

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LR+C DCH  TKFISK   REI++RDV RFHHF++G CSCGDYW
Sbjct: 611 LRLCEDCHSVTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 190/396 (47%), Gaps = 15/396 (3%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           ++  L+  Y   G+ +    +VFD    K+   WN+++  L      D AL     M   
Sbjct: 110 LSTRLIEAYAALGA-LPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLADMGRL 168

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLG--RQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
            V   S++      AC  +S          R+VH +++R G   +T +   L+  YAKLG
Sbjct: 169 GVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLG 228

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASV 289
            V  A+++F +  +R++VSW+ ++   ++N++  +A+   + M      + P+ ++I SV
Sbjct: 229 IVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSV 288

Query: 290 LPACSHLEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           L AC+ +  L  GK +HAY LR   D L+    V +AL+ MY  C  +E GR +F +I  
Sbjct: 289 LNACAGVNALSHGKLLHAYILRRGFDSLVS---VLNALMAMYMRCGCLEVGRHIFKWIGH 345

Query: 348 KK-IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++ +  WN++I+GYG + +  EA+ +F +M  V G  P+  T  SV+ AC  +    + +
Sbjct: 346 RRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHV-GFSPSIITFISVLGACSHAGLVNEGK 404

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTIC 465
            +    ++ G+         ++D+  R G+++ +  +   M +  +   W  ++    I 
Sbjct: 405 MLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIH 464

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
           G    A +    + ++ E +N  N   L +   R K
Sbjct: 465 GHVEYAEIACSHLFDL-EPRNAGNYVLLADIYARAK 499



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 135/253 (53%), Gaps = 14/253 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG-----KQIHAHVVKYGYGLSSVT 114
           EA+    +M R  +  D++++   LKA   +           +++HAH ++ GY L +  
Sbjct: 157 EALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHT-H 215

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           VA TL++ Y K G   +    VF  + E++ VSW++MI    +  +   A+E F+ M+ S
Sbjct: 216 VATTLIDCYAKLGIVRY-AESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMAS 274

Query: 175 NVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
           + +  P+S T+VSV  AC+ +   + L  G+ +H   LR G +    ++NALMAMY + G
Sbjct: 275 DADLVPNSITIVSVLNACAGV---NALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCG 331

Query: 232 RVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
            ++  + +FK     RD+VSWN+++S    +    EAV    +M   G  P  ++  SVL
Sbjct: 332 CLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVL 391

Query: 291 PACSHLEMLDTGK 303
            ACSH  +++ GK
Sbjct: 392 GACSHAGLVNEGK 404


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/668 (36%), Positives = 362/668 (54%), Gaps = 33/668 (4%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + ++   ++  YA+  R D A  LF     +D+VSWN+++           A     +M 
Sbjct: 25  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            R +    VS  +++        ++  + +       DI   NS +       YC    V
Sbjct: 85  ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYG-----YCCNGRV 135

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVP 394
           E G R+F  +  + +  W +MI G  Q+   EEAL LF +M      + P ++T   V+ 
Sbjct: 136 EDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVIT 195

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC  + A      IH H  KLG   D Y+  AL+  Y+   ++E S  +F      + V 
Sbjct: 196 ACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVI 255

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W  ++TGY +  +H DAL +  EM              + E VL   PN  +  + L  C
Sbjct: 256 WTALVTGYGLNCKHEDALKVFGEM--------------MREGVL---PNQSSFTSALNSC 298

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L AL  G+EIH  A++  L TDV VG++L+ MY +CG LN    +F  +  +N+++WN
Sbjct: 299 CGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWN 358

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I+    HG G   L     MV        V+P+E+TF  L +ACSHSGM  +G  LF 
Sbjct: 359 SVIVGCAQHGCGMWALAFFNQMVRS-----MVEPDEITFTGLLSACSHSGMSQKGRCLFK 413

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
              ++   E   DHYAC+VD+LGR+GK+E+A +LI  MP + +    W  LL AC +H  
Sbjct: 414 YFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSM-VWLVLLSACTMHSK 472

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E+ E AA+ +  LEP  +S YVLLSN+Y+SA  W     +R++MK+ G+ K+PG SWI 
Sbjct: 473 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 532

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
                ++FL+GD SH  S++++  LE L  ++++ GYVPD    LH+V +E+KE +L  H
Sbjct: 533 IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYH 592

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SE+LAI FG+++T  G+TI V KNLRVC DCH A K I+KI  R+II+RD  RFHHF +G
Sbjct: 593 SERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDG 652

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 653 RCSCGDYW 660



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 244/554 (44%), Gaps = 85/554 (15%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQI-HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           D  +FP V      I   +   +  HA  + Y   +  V   N+++     C +D+    
Sbjct: 19  DKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC-ADLTMAR 77

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD + E+  VSW +MI    +FGK ++A   F  M +                     
Sbjct: 78  KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF--------------------- 116

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            RD              +  WN+ I       Y   GRV+D   LF+    R+++SW ++
Sbjct: 117 -RD--------------IAAWNSMIYG-----YCCNGRVEDGLRLFQEMPCRNVISWTSM 156

Query: 255 VSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +  L Q+ +  EA+   RQM   G  +KP   +   V+ AC++   L  G +IHA+  + 
Sbjct: 157 IGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKL 216

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
               D +++ +AL+  Y NC+++E   RVF       + +W A++TGYG N   E+AL +
Sbjct: 217 GYSFD-AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 275

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M    G+ PN ++ +S + +C   EA      IH  A+KLGL  D +V N+L+ MY 
Sbjct: 276 FGEMMR-EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 334

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R G +     IF  +  ++ VSWN++I G   C QHG  +  L     M     R+ V  
Sbjct: 335 RCGNLNDGVVIFKRISKKNIVSWNSVIVG---CAQHGCGMWALAFFNQMV----RSMV-- 385

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAK 551
                   +P+ IT   +L  C       KG+ +  Y   N  A   +   + +VD+  +
Sbjct: 386 --------EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR 437

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE------------------L 592
            G L  A  +   MPV+ N + W V++ A  MH +  EV E                  L
Sbjct: 438 SGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK-LEVAERAAKCIIDLEPHCSSAYVL 496

Query: 593 LKNMVAEGSRGGEV 606
           L N+ A  SR  +V
Sbjct: 497 LSNLYASASRWSDV 510



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 11/264 (4%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           RSE     FR+ +   +E     ++P +  +  V+ A A    L  G QIHAHV K GY 
Sbjct: 165 RSEEALGLFRQMMGCGVE-----VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYS 219

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +  ++  L+  Y  C   M D  +VF      + V W +++       K + AL+ F 
Sbjct: 220 FDAY-ISAALITFYANC-KQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFG 277

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M+   V P+  +  S   +C  L   + L  GR++H  ++++G E + F+ N+L+ MY 
Sbjct: 278 EMMREGVLPNQSSFTSALNSCCGL---EALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 334

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           + G ++D   +FK    +++VSWN+++   +Q+   + A+ F  QM    ++PD ++   
Sbjct: 335 RCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 394

Query: 289 VLPACSHLEMLDTGKEIHAYALRN 312
           +L ACSH  M   G+ +  Y   N
Sbjct: 395 LLSACSHSGMSQKGRCLFKYFSEN 418



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 163/376 (43%), Gaps = 33/376 (8%)

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           + ++  R VFD +S   + L+  MITGY +N   + AL LF +M        +  + +S+
Sbjct: 9   QRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-----KDVVSWNSM 63

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +  C           +     +    R       +++ + + G+IE+++ +F  M  RD 
Sbjct: 64  IKGCFDCADLTMARKLFDEMPE----RSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI 119

Query: 453 VSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRNNVYDLDET 496
            +WN+MI GY   G+  D L L +EM                Q+   E+       +   
Sbjct: 120 AAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGC 179

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
            +  KP S T   V+  C   SAL +G +IHA+  +   + D  + +AL+  YA C  + 
Sbjct: 180 GVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQME 239

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            + RVF      NV+ W  ++  YG++ + ++ L++   M+ EG     V PN+ +F + 
Sbjct: 240 DSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG-----VLPNQSSFTSA 294

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             +C     +  G ++ +      G+E        ++ +  R G + D   +   +  + 
Sbjct: 295 LNSCCGLEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK- 352

Query: 677 DKAGAWSSLLGACRIH 692
               +W+S++  C  H
Sbjct: 353 -NIVSWNSVIVGCAQH 367



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 26/252 (10%)

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV-- 490
           R  RI+ ++T+FD +   D   +  MITGY    +   AL L  EM  +++  + N++  
Sbjct: 7   RNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP-VKDVVSWNSMIK 65

Query: 491 --YDL-DETVLR------PKPNSITLMTVLPGCGALSALAKGK-EIHAYAIRNMLATDVV 540
             +D  D T+ R      P+ + ++  T++ G      L  GK E+       M   D+ 
Sbjct: 66  GCFDCADLTMARKLFDEMPERSVVSWTTMING-----FLQFGKIEVAEGLFYKMPFRDIA 120

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             ++++  Y   G +    R+F  MP RNVI+W  +I     HG  +E L L + M+  G
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY--ACVVDLLGR 658
               EVKP   T+  +  AC+++  + +G+ +   +   + +  S D Y  A ++     
Sbjct: 181 V---EVKPTSSTYCCVITACANASALYQGVQIHAHV---FKLGYSFDAYISAALITFYAN 234

Query: 659 AGKVEDAYQLIN 670
             ++ED+ ++ +
Sbjct: 235 CKQMEDSLRVFH 246


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/668 (36%), Positives = 362/668 (54%), Gaps = 33/668 (4%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + ++   ++  YA+  R D A  LF     +D+VSWN+++           A     +M 
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            R +    VS  +++        ++  + +       DI   NS +       YC    V
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYG-----YCCNGRV 151

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVP 394
           E G R+F  +  + +  W +MI G  Q+   EEAL LF +M      + P ++T   V+ 
Sbjct: 152 EDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVIT 211

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC  + A      IH H  KLG   D Y+  AL+  Y+   ++E S  +F      + V 
Sbjct: 212 ACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVI 271

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W  ++TGY +  +H DAL +  EM              + E VL   PN  +  + L  C
Sbjct: 272 WTALVTGYGLNCKHEDALKVFGEM--------------MREGVL---PNQSSFTSALNSC 314

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L AL  G+EIH  A++  L TDV VG++L+ MY +CG LN    +F  +  +N+++WN
Sbjct: 315 CGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWN 374

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I+    HG G   L     MV        V+P+E+TF  L +ACSHSGM  +G  LF 
Sbjct: 375 SVIVGCAQHGCGMWALAFFNQMVRS-----MVEPDEITFTGLLSACSHSGMSQKGRCLFK 429

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
              ++   E   DHYAC+VD+LGR+GK+E+A +LI  MP + +    W  LL AC +H  
Sbjct: 430 YFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSM-VWLVLLSACTMHSK 488

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +E+ E AA+ +  LEP  +S YVLLSN+Y+SA  W     +R++MK+ G+ K+PG SWI 
Sbjct: 489 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 548

Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
                ++FL+GD SH  S++++  LE L  ++++ GYVPD    LH+V +E+KE +L  H
Sbjct: 549 IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYH 608

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SE+LAI FG+++T  G+TI V KNLRVC DCH A K I+KI  R+II+RD  RFHHF +G
Sbjct: 609 SERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDG 668

Query: 875 TCSCGDYW 882
            CSCGDYW
Sbjct: 669 RCSCGDYW 676



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 244/554 (44%), Gaps = 85/554 (15%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQI-HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           D  +FP V      I   +   +  HA  + Y   +  V   N+++     C +D+    
Sbjct: 35  DKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC-ADLTMAR 93

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           K+FD + E+  VSW +MI    +FGK ++A   F  M +                     
Sbjct: 94  KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF--------------------- 132

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
            RD              +  WN+ I       Y   GRV+D   LF+    R+++SW ++
Sbjct: 133 -RD--------------IAAWNSMIYG-----YCCNGRVEDGLRLFQEMPCRNVISWTSM 172

Query: 255 VSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
           +  L Q+ +  EA+   RQM   G  +KP   +   V+ AC++   L  G +IHA+  + 
Sbjct: 173 IGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKL 232

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
               D +++ +AL+  Y NC+++E   RVF       + +W A++TGYG N   E+AL +
Sbjct: 233 GYSFD-AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 291

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M    G+ PN ++ +S + +C   EA      IH  A+KLGL  D +V N+L+ MY 
Sbjct: 292 FGEMMR-EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 350

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           R G +     IF  +  ++ VSWN++I G   C QHG  +  L     M     R+ V  
Sbjct: 351 RCGNLNDGVVIFKRISKKNIVSWNSVIVG---CAQHGCGMWALAFFNQMV----RSMV-- 401

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAK 551
                   +P+ IT   +L  C       KG+ +  Y   N  A   +   + +VD+  +
Sbjct: 402 --------EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR 453

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE------------------L 592
            G L  A  +   MPV+ N + W V++ A  MH +  EV E                  L
Sbjct: 454 SGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK-LEVAERAAKCIIDLEPHCSSAYVL 512

Query: 593 LKNMVAEGSRGGEV 606
           L N+ A  SR  +V
Sbjct: 513 LSNLYASASRWSDV 526



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 11/264 (4%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           RSE     FR+ +   +E     ++P +  +  V+ A A    L  G QIHAHV K GY 
Sbjct: 181 RSEEALGLFRQMMGCGVE-----VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYS 235

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +  ++  L+  Y  C   M D  +VF      + V W +++       K + AL+ F 
Sbjct: 236 FDAY-ISAALITFYANC-KQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFG 293

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M+   V P+  +  S   +C  L   + L  GR++H  ++++G E + F+ N+L+ MY 
Sbjct: 294 EMMREGVLPNQSSFTSALNSCCGL---EALDWGREIHTAAVKLGLETDVFVGNSLIVMYY 350

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           + G ++D   +FK    +++VSWN+++   +Q+   + A+ F  QM    ++PD ++   
Sbjct: 351 RCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 410

Query: 289 VLPACSHLEMLDTGKEIHAYALRN 312
           +L ACSH  M   G+ +  Y   N
Sbjct: 411 LLSACSHSGMSQKGRCLFKYFSEN 434



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 37/407 (9%)

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           + ++  R VFD +S   + L+  MITGY +N   + AL LF +M        +  + +S+
Sbjct: 25  QRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-----KDVVSWNSM 79

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +  C           +     +    R       +++ + + G+IE+++ +F  M  RD 
Sbjct: 80  IKGCFDCADLTMARKLFDEMPE----RSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI 135

Query: 453 VSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRNNVYDLDET 496
            +WN+MI GY   G+  D L L +EM                Q+   E+       +   
Sbjct: 136 AAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGC 195

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
            +  KP S T   V+  C   SAL +G +IHA+  +   + D  + +AL+  YA C  + 
Sbjct: 196 GVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQME 255

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            + RVF      NV+ W  ++  YG++ + ++ L++   M+ EG     V PN+ +F + 
Sbjct: 256 DSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG-----VLPNQSSFTSA 310

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             +C     +  G ++ +      G+E        ++ +  R G + D   +   +  + 
Sbjct: 311 LNSCCGLEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK- 368

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLF---LLEPDVASHYVLLS 720
               +W+S++  C  H    +  +A  N     ++EPD  +   LLS
Sbjct: 369 -NIVSWNSVIVGCAQH-GCGMWALAFFNQMVRSMVEPDEITFTGLLS 413


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/666 (36%), Positives = 363/666 (54%), Gaps = 72/666 (10%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
           F +N ++A   + G +D A  +F     ++ ++WN+++  +S+                 
Sbjct: 62  FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK----------------- 104

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
                                 D  + + A+ L ++I   ++F  + ++  Y      E 
Sbjct: 105 ----------------------DPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            +  FD +  K  A WN MITGY +    E+A  LF  M E      N  + ++++   +
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME-----KNEVSWNAMISGYI 197

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWN 456
                        H  K+   R      A++  Y +  ++E+++ +F DM V ++ V+WN
Sbjct: 198 ECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
            MI+GY    +  D L L R M              L+E +   +PNS  L + L GC  
Sbjct: 254 AMISGYVENSRPEDGLKLFRAM--------------LEEGI---RPNSSGLSSALLGCSE 296

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           LSAL  G++IH    ++ L  DV   ++L+ MY KCG L  A ++F++M  ++V+ WN +
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM 356

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I  Y  HG   + L L + M+       +++P+ +TF+A+  AC+H+G+V+ GM  F  M
Sbjct: 357 ISGYAQHGNADKALCLFREMI-----DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
             DY +EP PDHY C+VDLLGRAGK+E+A +LI  MP     A  + +LLGACR+H+NVE
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR-PHAAVFGTLLGACRVHKNVE 470

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           + E AA+ L  L    A+ YV L+NIY+S   W+    VRK+MKE  V K PG SWIE  
Sbjct: 471 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIR 530

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           +++H F + D  H + + +H  L+ L ++M+  GY P+    LHNV EE+KE LL  HSE
Sbjct: 531 NKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSE 590

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           KLA+AFG +  P G+ I+V KNLR+C DCH+A KFIS+IE REII+RD  RFHHFK+G+C
Sbjct: 591 KLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSC 650

Query: 877 SCGDYW 882
           SCGDYW
Sbjct: 651 SCGDYW 656



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 36/327 (11%)

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FDR+  KD  SWN+MI    R G+ + A E F  M+  N E S   ++S  + C +L + 
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN-EVSWNAMISGYIECGDLEKA 205

Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIV 255
                   V G    V  W      A++  Y K  +V+ A+ +FK    +++LV+WN ++
Sbjct: 206 SHFFKVAPVRG----VVAWT-----AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           S   +N +  + +   R M   GI+P+   ++S L  CS L  L  G++IH    ++ + 
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
            D + + S L+ MYC C E+    ++F+ +  K +  WNAMI+GY Q+   ++AL LF +
Sbjct: 317 NDVTALTS-LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG------RDRYVQ----- 424
           M +   + P+  T  +V+ AC            H   + +G+       RD  V+     
Sbjct: 376 MID-NKIRPDWITFVAVLLACN-----------HAGLVNIGMAYFESMVRDYKVEPQPDH 423

Query: 425 -NALMDMYSRMGRIEISKTIFDDMEVR 450
              ++D+  R G++E +  +   M  R
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFR 450



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 192/431 (44%), Gaps = 39/431 (9%)

Query: 141 TEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           +++DQ+   N +IA   R G  D AL  F  M   N    +  L+ ++        +D  
Sbjct: 56  SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGIS--------KDPS 107

Query: 200 RLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           R+  + H     + E +TF  N +++ Y +    + A++ F     +D  SWNT+++  +
Sbjct: 108 RM-MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
           +  +  +A    R++    ++ + VS  +++    ++E  D  K  H + +     +   
Sbjct: 167 RRGEMEKA----RELFYSMMEKNEVSWNAMISG--YIECGDLEKASHFFKVAP---VRGV 217

Query: 320 FVGSALVDMYCNCREVECGRRVF-DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
              +A++  Y   ++VE    +F D   +K +  WNAMI+GY +N   E+ L LF  M E
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G+ PN++ +SS +  C    A      IH    K  L  D     +L+ MY + G + 
Sbjct: 278 -EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F+ M+ +D V+WN MI+GY   G    AL L REM              +D  + 
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM--------------IDNKI- 381

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNF 557
             +P+ IT + VL  C     +  G       +R+  +       + +VD+  + G L  
Sbjct: 382 --RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439

Query: 558 ARRVFDLMPVR 568
           A ++   MP R
Sbjct: 440 ALKLIRSMPFR 450



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 9/148 (6%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           ++E+ R E     FR        M    I+P++    + L   + +  L LG+QIH  +V
Sbjct: 259 YVENSRPEDGLKLFRA-------MLEEGIRPNSSGLSSALLGCSELSALQLGRQIH-QIV 310

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
                 + VT   +L++MY KCG ++ D +K+F+ + +KD V+WN+MI+   + G  D A
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCG-ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN 192
           L  FR M+ + + P   T V+V LAC++
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNH 397


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/689 (35%), Positives = 377/689 (54%), Gaps = 22/689 (3%)

Query: 199 LRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L   R VHG+  + G   + F+  +L+  Y + G   DA+ LF    +R++V+W  +V+ 
Sbjct: 94  LGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTG 153

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            + N +    +    +M   G  P   ++ + L AC     +D GK++H YA++      
Sbjct: 154 YTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESI 213

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY-DEEALMLFIKM 376
            S +G++L  +Y     ++   R F  I +K +  W  MI+   ++E   E  L LFI M
Sbjct: 214 TS-MGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDM 272

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
             + G+ PN  T++SV+  C         + +   + K+G   +  V+N+ M +Y R G 
Sbjct: 273 L-MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGE 331

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYT-ICGQHGDALMLLREMQNMEEEKNRNNVY-DLD 494
            + +  +F+ ME    ++WN MI+GY  I     D      ++Q          ++ DL 
Sbjct: 332 TDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD------DLQARSRGFQALTIFRDLK 385

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            +V+  KP+  T  ++L  C A+ AL +G++IHA  I++   +DVVV SALV+MY KCGC
Sbjct: 386 RSVM--KPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A + F  MP R  +TW  +I  Y  HG+ QE ++L + M   G     V+PNE+TF+
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG-----VRPNEITFV 498

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L +ACS++G+V E    F  MK +Y IEP  DHY C++D+  R G+VEDA+  I     
Sbjct: 499 SLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGF 558

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E ++A  WSSL+  CR H N+E+   AA  L  L+P     Y+LL N+Y S + W     
Sbjct: 559 EPNEA-IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVAR 617

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK MK+  V      SWI   D+++ F A D +H Q+ +L+  LENL E+ +  GY P 
Sbjct: 618 VRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPY 677

Query: 795 TSCVLHNVNEEEKETL--LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
            +  L +  ++EK     L  HSE+LA+A G+L TPPG T+RV KN+ +C DCH + K  
Sbjct: 678 QNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLF 737

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDY 881
           S +E+REII+RD +R H FK+G CSCGD+
Sbjct: 738 SLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 256/511 (50%), Gaps = 47/511 (9%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L   + +H H+ K G G + + VA +LVN Y +CG+   D  ++FD + E++ V+W +++
Sbjct: 94  LGAARAVHGHMAKTGAG-ADMFVATSLVNAYMRCGAAR-DARRLFDGMPERNVVTWTALV 151

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                  +  L LE F  ML     PS +TL +   AC  L+  D + LG+QVHG +++ 
Sbjct: 152 TGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC--LASCD-VDLGKQVHGYAIKY 208

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE-AVMF 270
           G E  T + N+L ++YAKLG +D A   F    ++++++W T++S+ +++++ +E  +  
Sbjct: 209 GAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSL 268

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M + G+ P+  ++ SV+  C     L+ GK++ A++ +      N  V ++ + +Y 
Sbjct: 269 FIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET-NLPVKNSTMYLYL 327

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQ---NEYDE--------EALMLFIKMEEV 379
              E +   R+F+ + D  I  WNAMI+GY Q   +  D+        +AL +F  ++  
Sbjct: 328 RKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRS 387

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + P+  T SS++  C    A    E IH   IK G   D  V +AL++MY++ G I+ 
Sbjct: 388 V-MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +   F +M  R  V+W +MI+GY+  GQ  +A+ L  EM+                 +  
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR-----------------LAG 489

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCG---- 553
            +PN IT +++L  C + + L +  E +   ++     + VV     ++DM+ + G    
Sbjct: 490 VRPNEITFVSLLSAC-SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED 548

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
             +F +R     P  N   W+ ++     HG
Sbjct: 549 AFSFIKRT-GFEP--NEAIWSSLVAGCRSHG 576



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 214/427 (50%), Gaps = 37/427 (8%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           ++EM      P ++   A L A     D+ LGKQ+H + +KYG   S  ++ N+L ++Y 
Sbjct: 167 FVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYG-AESITSMGNSLCSLYA 225

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-DLALEAFRMMLYSNVEPSSFTL 183
           K GS +    + F RI EK+ ++W +MI+      +  +L L  F  ML   V P+ FTL
Sbjct: 226 KLGS-LDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTL 284

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            SV   C     R  L LG+QV   S ++G E N  + N+ M +Y + G  D+A  LF+ 
Sbjct: 285 TSVMSLCGT---RLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 341

Query: 243 FEDRDLVSWNTIVSSLSQ-----------NDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            ED  +++WN ++S  +Q             +  +A+   R +    +KPD  + +S+L 
Sbjct: 342 MEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILS 401

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
            CS +  L+ G++IHA  +++  L D   V SALV+MY  C  ++   + F  +  +   
Sbjct: 402 VCSAMMALEQGEQIHAQTIKSGFLSD-VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFV 460

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W +MI+GY Q+   +EA+ LF +M  +AG+ PN  T  S++ AC  +    + E     
Sbjct: 461 TWTSMISGYSQHGQPQEAIQLFEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 412 AIK---LGLGRDRYVQNALMDMYSRMGRIE-----ISKTIFDDMEVRDTVSWNTMITGYT 463
             K   +    D Y    ++DM+ R+GR+E     I +T F+  E      W++++ G  
Sbjct: 520 MKKEYCIEPVVDHY--GCMIDMFVRLGRVEDAFSFIKRTGFEPNE----AIWSSLVAG-- 571

Query: 464 ICGQHGD 470
            C  HG+
Sbjct: 572 -CRSHGN 577



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           CV   +      +HGH  K G G D +V  +L++ Y R G    ++ +FD M  R+ V+W
Sbjct: 88  CVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTW 147

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             ++TGYT+  Q    L +  EM  M                    P+  TL   L  C 
Sbjct: 148 TALVTGYTLNSQPALGLEVFVEMLEMGR-----------------YPSHYTLGATLNACL 190

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           A   +  GK++H YAI+    +   +G++L  +YAK G L+ A R F  +P +NVITW  
Sbjct: 191 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 250

Query: 576 IIMAYGMHGEGQEV-LELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +I A     E  E+ L L  +M+ +G     V PNE T  ++ + C
Sbjct: 251 MISACAEDEECVELGLSLFIDMLMDG-----VMPNEFTLTSVMSLC 291



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 15/238 (6%)

Query: 52  EARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           +ARS  F +A+  + ++ RS ++PD F F ++L   + +  L  G+QIHA  +K G+ LS
Sbjct: 369 QARSRGF-QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF-LS 426

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V V + LVNMY KCG  + D  K F  +  +  V+W SMI+   + G+   A++ F  M
Sbjct: 427 DVVVNSALVNMYNKCGC-IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN---ALMAMYA 228
             + V P+  T VS+  ACS      GL    + + + ++       +++    ++ M+ 
Sbjct: 486 RLAGVRPNEITFVSLLSACS----YAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFV 541

Query: 229 KLGRVDDAKTLFK--SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
           +LGRV+DA +  K   FE  + + W+++V+    +      + F     L  +KP G+
Sbjct: 542 RLGRVEDAFSFIKRTGFEPNEAI-WSSLVAGCRSHGNM--ELAFYAADKLLELKPKGI 596



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 11/198 (5%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            S   + +L  C  + +L   + +H +  +     D+ V ++LV+ Y +CG    ARR+F
Sbjct: 77  QSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLF 136

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D MP RNV+TW  ++  Y ++ +    LE+   M+  G       P+  T  A   AC  
Sbjct: 137 DGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY-----PSHYTLGATLNACLA 191

Query: 623 SGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           S  V  G  +  Y +K  YG E        +  L  + G ++ A +    +P +      
Sbjct: 192 SCDVDLGKQVHGYAIK--YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK--NVIT 247

Query: 682 WSSLLGACRIHQN-VEIG 698
           W++++ AC   +  VE+G
Sbjct: 248 WTTMISACAEDEECVELG 265


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/797 (32%), Positives = 421/797 (52%), Gaps = 49/797 (6%)

Query: 12  PSPPLSSLQTHQPPATTATS----------LPLPGSQTRCKESWIESLRSEARSNQFREA 61
           P  P SS++  +P    A S           P P +     +  I SL    + N  REA
Sbjct: 25  PFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISL---CKKNLHREA 81

Query: 62  ILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           + ++    +    P  +  +  ++ A + ++ L  G++IH H++   Y    + + N ++
Sbjct: 82  LKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQ-PDMILQNHIL 140

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           +MYGKCGS + +   +FD +  K+ VSW SMI+   R+G+ D A+  +  ML S   P  
Sbjct: 141 SMYGKCGS-LKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKT 238
           FT  S+  +CS L   D  +L RQ+H + L+  E+   ++  NAL++MY K  ++ DA  
Sbjct: 200 FTFGSIVKSCSGL---DDFKLARQLHAHVLK-SEFGADLIAQNALISMYTKFSQMADAIN 255

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLE 297
           +F     +DL+SW ++++  SQ    LEA+   R+M  + + +P+     S   ACS L 
Sbjct: 256 VFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
             D G++IH   ++  +  D  F G +L DMY  C  +E  R VF  I    +  WNA+I
Sbjct: 316 EPDCGRQIHGLCIKFGLGSD-LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAII 374

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            G+      +E+   F +M    GL PN  T+ S++ AC           +H + +K+G 
Sbjct: 375 AGFASVSNAKESSSFFSQMRH-TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF 433

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
             D  V N+L+ MYS+   +  +  +F+D+  + D VSWNT++T      Q G+ L L +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            M                    R KP+ +TL  VL   G +++   G +IH + +++ L 
Sbjct: 494 LM-----------------FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            D+ V +AL++MY KCG L  AR++FD +   ++I+W+ +I+ Y   G G+E  EL + M
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTM 596

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                RG  VKPNE+TF+ +  ACSH GMV EG+ L+  M++DY I P+ +H +C+VDLL
Sbjct: 597 -----RGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLL 651

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
            RAG ++ A   I  MP   D    W +LL AC++H N+E+G+ AA+N+  ++P  ++  
Sbjct: 652 ARAGCLDVAEDFIKQMPFVPDVV-VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAV 710

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           V+L NI++S+  W     +R  M+ M V K PG SWIE  D++H FLA D  H +  +++
Sbjct: 711 VMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIY 770

Query: 777 GFLENLSERMRKEGYVP 793
             LE L  ++  +G  P
Sbjct: 771 TMLEELMLQILDDGCDP 787


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 344/580 (59%), Gaps = 26/580 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           +++HA+ + N  L D   + + L+  Y   + ++    +FD ++ +    W+ M+ G+ +
Sbjct: 20  RQVHAHVVANGTLQD-LVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAK 78

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
                     F ++    G+ P+  T+  V+  C           IH   +K GL  D +
Sbjct: 79  AGDHAGCYATFRELLR-CGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHF 137

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V  +L+DMY++   +E ++ +F+ M  +D V+W  MI  Y  C  + ++L+L   M+   
Sbjct: 138 VCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMR--- 193

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                      +E V+   P+ + ++TV+  C  L A+ + +  + Y +RN  + DV++G
Sbjct: 194 -----------EEGVV---PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +A++DMYAKCG +  AR VFD M  +NVI+W+ +I AYG HG G++ ++L   M++    
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLS---- 295

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              + PN VTF++L  ACSH+G++ EG+  F  M +++ + P   HY C+VDLLGRAG++
Sbjct: 296 -CAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRL 354

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
           ++A +LI  M  E D+   WS+LLGACRIH  +E+ E AA +L  L+P    HYVLLSNI
Sbjct: 355 DEALRLIEAMTVEKDER-LWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNI 413

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A  W+K    R  M +  ++K PG +WIE  ++ ++F  GD SH QS++++  L +L
Sbjct: 414 YAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSL 473

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            +++   GYVPDT  VL +V EE K+ +L  HSEKLAIAFG++  P G  IR++KNLRVC
Sbjct: 474 IKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVC 533

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH  +K +S I  R II+RD  RFHHF +GTCSCGDYW
Sbjct: 534 GDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 194/372 (52%), Gaps = 23/372 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +Q+HAHVV  G  L  + +AN L+  Y +  + + D Y +FD +T +D  +W+ M+    
Sbjct: 20  RQVHAHVVANG-TLQDLVIANKLLYTYAQHKA-IDDAYSLFDGLTMRDSKTWSVMVGGFA 77

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW- 215
           + G        FR +L   V P ++TL  V   C +   R  L++GR +H   L+ G   
Sbjct: 78  KAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRD---RTDLQIGRVIHDVVLKHGLLS 134

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+  +L+ MYAK   V+DA+ LF+    +DLV+W  ++ + +  + +   V+F R M 
Sbjct: 135 DHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDR-MR 193

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G+ PD V++ +V+ AC+ L  +   +  + Y +RN   +D   +G+A++DMY  C  V
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLD-VILGTAMIDMYAKCGSV 252

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R VFD + +K +  W+AMI  YG +   ++A+ LF  M   A L PN  T  S++ A
Sbjct: 253 ESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL-PNRVTFVSLLYA 311

Query: 396 CVRSEAFPDKEGIH-------GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           C  S A   +EG+         HA++     D      ++D+  R GR++ +  + + M 
Sbjct: 312 C--SHAGLIEEGLRFFNSMWEEHAVR----PDVKHYTCMVDLLGRAGRLDEALRLIEAMT 365

Query: 449 V-RDTVSWNTMI 459
           V +D   W+ ++
Sbjct: 366 VEKDERLWSALL 377



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 215/487 (44%), Gaps = 70/487 (14%)

Query: 203 RQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           RQVH + +  G     ++ N L+  YA+   +DDA +LF     RD  +W+ +V   ++ 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                     R++   G+ PD  ++  V+  C     L  G+ IH   L++ +L D+ FV
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDH-FV 138

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ-NEYDEEALMLFIKMEEVA 380
            ++LVDMY  C  VE  +R+F+ +  K +  W  MI  Y   N Y  E+L+LF +M E  
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY--ESLVLFDRMRE-E 195

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ P+   M +VV AC +  A       + + ++ G   D  +  A++DMY++ G +E +
Sbjct: 196 GVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESA 255

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD M+ ++ +SW+ MI  Y   G+  DA+ L   M              L   +L  
Sbjct: 256 REVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMM--------------LSCAIL-- 299

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
            PN +T +++L  C     + +G                               L F   
Sbjct: 300 -PNRVTFVSLLYACSHAGLIEEG-------------------------------LRFFNS 327

Query: 561 VFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           +++   VR +V  +  ++   G  G   E L L++ M  E         +E  + AL  A
Sbjct: 328 MWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVE--------KDERLWSALLGA 379

Query: 620 CSHSGMVSEGMDLFYKMKDD-YGIEP-SPDHYACVVDLLGRAGKVEDAYQLINMMPP-EF 676
           C     +   M+L  K  +    ++P +P HY  + ++  +AGK E   +  +MM   + 
Sbjct: 380 CR----IHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKL 435

Query: 677 DKAGAWS 683
            K   W+
Sbjct: 436 KKIPGWT 442



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 7/268 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R  ++W   +   A++        ++ E+ R  + PDN+  P V++      DL +
Sbjct: 60  GLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQI 119

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ IH  V+K+G  LS   V  +LV+MY KC   + D  ++F+R+  KD V+W  MI   
Sbjct: 120 GRVIHDVVLKHGL-LSDHFVCASLVDMYAKCIV-VEDAQRLFERMLSKDLVTWTVMIGAY 177

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
                ++ +L  F  M    V P    +V+V  AC+ L     +   R  +   +R G  
Sbjct: 178 ADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNACAKLG---AMHRARFANDYIVRNGFS 233

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  +  A++ MYAK G V+ A+ +F   ++++++SW+ ++++   + +  +A+     M
Sbjct: 234 LDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMM 293

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
               I P+ V+  S+L ACSH  +++ G
Sbjct: 294 LSCAILPNRVTFVSLLYACSHAGLIEEG 321


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/616 (36%), Positives = 359/616 (58%), Gaps = 30/616 (4%)

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
           A+  L  M  RG+  D ++ + ++  C     +  GK +H +   N      +F+ + L+
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYH-PKTFLTNILI 327

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           +MY     +E  + +FD + ++ +  W  MI+ Y   + ++ A+ L   M    G+ PN 
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR-DGVMPNM 386

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            T SSV+ AC   E   D + +H   +K+GL  D +V++AL+D+YS+MG +  +  +F +
Sbjct: 387 FTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFRE 443

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M   D+V WN++I  +       +AL L + M+ +         +  D++         T
Sbjct: 444 MMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVG--------FPADQS---------T 486

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L +VL  C +LS L  G++ H + ++     D+++ +AL+DMY KCG L  A+ +F+ M 
Sbjct: 487 LTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMA 544

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            ++VI+W+ +I     +G   E L L ++M  +G      KPN +T + +  ACSH+G+V
Sbjct: 545 KKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGP-----KPNHITILGVLFACSHAGLV 599

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           +EG   F  M + YGI+P  +HY C++DLLGRA K++D  +LI+ M  E D    W +LL
Sbjct: 600 NEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVV-TWRTLL 658

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
            ACR  QNV++   AA+ +  L+P     YVLLSNIY+ ++ W+   +VR+ MK+ G+RK
Sbjct: 659 DACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRK 718

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE 806
           EPGCSWIE   +IH F+ GD SH Q ++++  L     R+   GYVPDT+ VL ++  E+
Sbjct: 719 EPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQ 778

Query: 807 KETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVR 866
           +E  L  HSEKLAI FGI++ P   TIR+ KNL++C DCH+  K I+++E R I++RD  
Sbjct: 779 REDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPI 838

Query: 867 RFHHFKNGTCSCGDYW 882
           R+HHF++G CSCGDYW
Sbjct: 839 RYHHFQDGVCSCGDYW 854



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 209/422 (49%), Gaps = 27/422 (6%)

Query: 47  ESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           ESL +         A+     M R  +  D+  +  ++K       +  GK++H H+   
Sbjct: 255 ESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSN 314

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           GY   +  + N L+NMY K    + +   +FD++ E++ VSW +MI+        D A+ 
Sbjct: 315 GYHPKTF-LTNILINMYVKFNL-LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMR 372

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMA 225
               M    V P+ FT  SV  AC  L         +Q+H   ++VG E + F+ +AL+ 
Sbjct: 373 LLAFMFRDGVMPNMFTFSSVLRACERLYDL------KQLHSWIMKVGLESDVFVRSALID 426

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           +Y+K+G + +A  +F+     D V WN+I+++ +Q+    EA+   + M   G   D  +
Sbjct: 427 VYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQST 486

Query: 286 IASVLPACSHLEMLDTGKEIHAYALR--NDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           + SVL AC+ L +L+ G++ H + L+   D++++N     AL+DMYC C  +E  + +F+
Sbjct: 487 LTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNN-----ALLDMYCKCGSLEDAKFIFN 541

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            ++ K +  W+ MI G  QN +  EAL LF  M +V G  PN  T+  V+ AC  S A  
Sbjct: 542 RMAKKDVISWSTMIAGLAQNGFSMEALNLFESM-KVQGPKPNHITILGVLFAC--SHAGL 598

Query: 404 DKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNT 457
             EG +      +   +  GR+ Y    ++D+  R  +++    +  +M    D V+W T
Sbjct: 599 VNEGWYYFRSMNNLYGIDPGREHY--GCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRT 656

Query: 458 MI 459
           ++
Sbjct: 657 LL 658



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 133/308 (43%), Gaps = 65/308 (21%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + + A+ +   EA+  Y  M R     D     +VL+A   +  L LG+Q H HV+
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K+   L    + N L++MY KCGS + D   +F+R+ +KD +SW++MIA L + G    A
Sbjct: 512 KFDQDL---ILNNALLDMYCKCGS-LEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEA 567

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN-------------LSRRDGLRLGRQVHGNSL- 210
           L  F  M     +P+  T++ V  ACS+             ++   G+  GR+ +G  L 
Sbjct: 568 LNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLD 627

Query: 211 ----------------------RVGEWNTFI------MNALMAMYAKLGRVDDAKTLFKS 242
                                  V  W T +       N  +A YA       AK + K 
Sbjct: 628 LLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYA-------AKEILK- 679

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            + +D  ++  + +  + + ++ +     R M  RGI+ +        P CS +E+    
Sbjct: 680 LDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKE--------PGCSWIEV---N 728

Query: 303 KEIHAYAL 310
           K+IHA+ L
Sbjct: 729 KQIHAFIL 736


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 343/597 (57%), Gaps = 24/597 (4%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           A++L +C     +  G+++HA  L +   +D + + + LVD+Y +C  V   RRVFD + 
Sbjct: 72  ATILRSCVLSRAVRPGRQLHARLLVSGTGLD-AVLATRLVDLYASCGHVSLARRVFDEMP 130

Query: 347 DK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
           ++  + LWN +I  Y ++   E A+ L+  M     + P+  T   V+ AC         
Sbjct: 131 NQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAG 190

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H   ++     D +V   L+DMY++ G ++ +  +F+D  +RD   WN+MI     C
Sbjct: 191 REVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA---C 247

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ+G     L   +NM  E                 P   TL++ +      SAL +G+E
Sbjct: 248 GQNGRPAEALTLCRNMAAEG--------------IAPTIATLVSAISAAAVASALPRGRE 293

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +H Y  R    +   + ++L+DMYAK G +  A  +F+ +  R +I+WN +I  +GMHG 
Sbjct: 294 LHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGH 353

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
                EL   M +E     +V P+ +TF+ + +AC+H GMV E  ++F  M   Y I+P+
Sbjct: 354 ADHAFELFSRMRSEA----QVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPT 409

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
             HY C+VD+LG +G+ ++A  +I  M  + D +G W +LL  C+IH+NVE+ E+A Q L
Sbjct: 410 VQHYTCLVDVLGHSGRFKEASDVIKGMLVKPD-SGIWGALLNGCKIHKNVELAELALQKL 468

Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
             LEP+ A +YVLLSNIY+ +  W++A  VRK M   G++K   CSWIE   + H FL G
Sbjct: 469 IELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVG 528

Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
           D SH +S+ ++  LE L   + + GYVPDT+ V HNV ++EK  ++ GHSE+LAIAFG++
Sbjct: 529 DASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLI 588

Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +TPP T + V KNLRVC DCH   K IS+IE REII+RDV R+HHF NG CSC D+W
Sbjct: 589 STPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 15/418 (3%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +L++    + +  G+Q+HA ++  G GL +V +A  LV++Y  CG  +    +VFD 
Sbjct: 71  YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAV-LATRLVDLYASCGH-VSLARRVFDE 128

Query: 140 ITEKDQVS-WNSMIATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRD 197
           +  +  V  WN +I    R G  + A+E +R ML Y +++P +FT   V  AC+ L    
Sbjct: 129 MPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALL--- 185

Query: 198 GLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
            L  GR+VH   +R   W T  F+   L+ MYAK G +D+A  +F     RD   WN+++
Sbjct: 186 DLSAGREVHDRVMRT-NWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMI 244

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           ++  QN +  EA+   R MA  GI P   ++ S + A +    L  G+E+H Y  R    
Sbjct: 245 AACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFG 304

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             +  + ++L+DMY     V     +F+ +  +++  WNAMI G+G + + + A  LF +
Sbjct: 305 SQDK-LKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSR 363

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSR 433
           M   A + P+  T   V+ AC       + + +    + +       VQ+   L+D+   
Sbjct: 364 MRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTV-YSIKPTVQHYTCLVDVLGH 422

Query: 434 MGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            GR + +  +   M V+ D+  W  ++ G  I      A + L+++  +E E   N V
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYV 480



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 15/195 (7%)

Query: 500 PKP-NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           P P N     T+L  C    A+  G+++HA  + +    D V+ + LVD+YA CG ++ A
Sbjct: 63  PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122

Query: 559 RRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           RRVFD MP + NV  WNV+I AY   G  +  +EL + M+A GS    +KP+  T+  + 
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGS----MKPDNFTYPPVL 178

Query: 618 AACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMMPP 674
            AC+    +S G ++  + M+ ++    + D + C  ++D+  + G +++A+ + N    
Sbjct: 179 KACAALLDLSAGREVHDRVMRTNW----ATDVFVCTGLIDMYAKCGCMDEAWAVFN--DT 232

Query: 675 EFDKAGAWSSLLGAC 689
               A  W+S++ AC
Sbjct: 233 TIRDAAVWNSMIAAC 247


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/584 (38%), Positives = 343/584 (58%), Gaps = 26/584 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCRE---VECGRRVFDFISDK-KIALWNAMIT 358
           ++IHA+++RN + I ++ +G  L+    +      +    +VF  I     + +WN +I 
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY +      A+ L+ +M     + P+  T   ++ A  +       E IH   I+ G G
Sbjct: 94  GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
              YVQN+L+ +Y+  G +  +  +FD M  +D V+WN++I G+   G+  +AL L  EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                        DL       KP+  T++++L  C  + AL  GK  H Y I+  L  +
Sbjct: 214 -------------DLKGI----KPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN 256

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           +   + L+D+YA+CG +  A+ +FD M  +N ++W  +I+   ++G G+E +EL KNM  
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNM-- 314

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E   G  + P E+TF+ +  ACSH GMV EG + F +M ++Y IEP  +H+ C+VDLL R
Sbjct: 315 ESKEG--LLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLAR 372

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG+V+ AY+ I  MP +      W +LLGAC +H + ++ E+A   +  LEP+ +  YVL
Sbjct: 373 AGQVKKAYEYILKMPMQ-PNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVL 431

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN+Y+S Q W     +RK+M   GVRK PG S +E G+ +H+FL GD SH Q++ ++  
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAK 491

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L+ +++R+R EGYVP  S V  +V EEEKE  L  HSEK+AIAF +++TP    IRV KN
Sbjct: 492 LKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKN 551

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           L+VC DCH A K +SK+ +REI++RD  RFHHFKNG+CSC DYW
Sbjct: 552 LKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 201/417 (48%), Gaps = 23/417 (5%)

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQV 146
           G+  L+  +QIHA  ++ G  +S   +   L+       S   M   +KVF +I +   V
Sbjct: 26  GVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85

Query: 147 S-WNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
             WN++I      G    A+  +R M  S  VEP + T   +  A   ++    +RLG  
Sbjct: 86  FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMA---DVRLGET 142

Query: 205 VHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +H   +R G  +  ++ N+L+ +YA  G V  A  +F    ++DLV+WN++++  ++N K
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EA+    +M L+GIKPDG +I S+L AC+ +  L  GK  H Y ++   L  N    +
Sbjct: 203 PEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVG-LTRNLHSSN 261

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
            L+D+Y  C  VE  + +FD + DK    W ++I G   N   +EA+ LF  ME   GL 
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLL 321

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           P   T   ++ AC  S     KEG           K+    + +    ++D+ +R G+++
Sbjct: 322 PCEITFVGILYAC--SHCGMVKEGFEYFRRMSEEYKIEPRIEHF--GCMVDLLARAGQVK 377

Query: 439 ISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDA-LMLLREMQNMEEEKNRNNVYDL 493
            +      M ++ + V W T++     C  HGD+ L  L  M+ ++ E N +  Y L
Sbjct: 378 KAYEYILKMPMQPNVVIWRTLLGA---CTVHGDSDLAELARMKILQLEPNHSGDYVL 431



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 17/300 (5%)

Query: 8   LTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE 67
           L  LPSPP         P + A  +     +      W   +R  A       A+  Y E
Sbjct: 60  LVSLPSPP---------PMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYRE 110

Query: 68  MTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M  S  ++PD   +P +LKAV  + D+ LG+ IH+ V++ G+G S + V N+L+++Y  C
Sbjct: 111 MRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG-SLIYVQNSLLHLYANC 169

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G D+   YKVFD++ EKD V+WNS+I      GK + AL  +  M    ++P  FT+VS+
Sbjct: 170 G-DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSL 228

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ +     L LG++ H   ++VG   N    N L+ +YA+ GRV++AKTLF    D
Sbjct: 229 LSACAKIG---ALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKE 304
           ++ VSW +++  L+ N    EA+   + M  + G+ P  ++   +L ACSH  M+  G E
Sbjct: 286 KNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFE 345



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 7/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A + +  EA+  Y EM    I+PD F   ++L A A I  L+LGK+ H ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYM 248

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G    ++  +N L+++Y +CG  + +   +FD + +K+ VSW S+I  L   G    
Sbjct: 249 IKVGLT-RNLHSSNVLLDLYARCGR-VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKE 306

Query: 164 ALEAFR-MMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEWNTFIMN 221
           A+E F+ M     + P   T V +  ACS+    ++G    R++            F   
Sbjct: 307 AIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHF--G 364

Query: 222 ALMAMYAKLGRVDDA-KTLFKSFEDRDLVSWNTIVSS 257
            ++ + A+ G+V  A + + K     ++V W T++ +
Sbjct: 365 CMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGA 401



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 20/196 (10%)

Query: 503 NSITLMTVLPGCGAL------SALAKGKEIHAYAIRNMLA-TDVVVGSALVDMYAKCGC- 554
            S+ L+ ++  C  L      S+L K ++IHA++IRN ++ +D  +G  L+         
Sbjct: 7   TSVLLLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSP 66

Query: 555 --LNFARRVFDLM--PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
             +++A +VF  +  P+ NV  WN +I  Y   G     + L + M A G     V+P+ 
Sbjct: 67  PPMSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGF----VEPDT 121

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            T+  L  A      V  G +  + +    G          ++ L    G V  AY++ +
Sbjct: 122 HTYPFLLKAVGKMADVRLG-ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180

Query: 671 MMPPEFDKAGAWSSLL 686
            M PE D   AW+S++
Sbjct: 181 KM-PEKDLV-AWNSVI 194


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 258/740 (34%), Positives = 391/740 (52%), Gaps = 39/740 (5%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N  + +L + GK   A +  + M  ++V  +  +   +  AC  L     L  GR +H  
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLR---SLADGRLIHDR 112

Query: 209 SLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
             R V   +  I N L+ MY   G   D + +F     ++LVSW  ++S+ ++N +  +A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +     M   GI+P+     S+L +C     L+ GK+IH++ +R   L  N  V +A+ +
Sbjct: 173 IRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQ-LNANITVETAICN 231

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  +E  + VFD +  +    W  ++ GY Q +  E AL LF +M  + G+  +  
Sbjct: 232 MYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMA-MEGVELDEF 290

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
             S V+  C   E +     IH H +KLG   +  V   L+D Y + G IE +   F  +
Sbjct: 291 VFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
              + VSW+ +I+G++  G+  D + +   +++             +  VL    NS   
Sbjct: 351 SEPNDVSWSALISGFSQSGRLEDCIKIFTSLRS-------------EGVVL----NSFIY 393

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            +V   C A + L  G + H  AI+  L + +   SA+V MY+KCG L++ARR F+ +  
Sbjct: 394 TSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE 453

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            + + W  II  Y  HG   E L   + M + G     V+PN VTFIA+  ACSHSG+V+
Sbjct: 454 PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG-----VRPNAVTFIAVLTACSHSGLVA 508

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           E       M  DYG++P+ DHY C++D   RAG +++A +LIN MP E D A +W SLLG
Sbjct: 509 EAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPD-AMSWKSLLG 567

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
            C  H ++++G+IAA+NLF L+P   + Y+LL N+YS+   W++A  VRK M E  ++KE
Sbjct: 568 GCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKE 627

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN-----LSERMRKEGYVPDTSCVLHNV 802
             CSWI    ++H+F+ GD  H Q+E ++  LE      +   +R      D SC L   
Sbjct: 628 VSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSL--- 684

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
               KE LL  HSEKLAIAFG+++T     I V KNLR C DCH+  K +S +  R+I++
Sbjct: 685 -SARKEQLL-DHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVV 742

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFHHFK+G CSC DYW
Sbjct: 743 RDSTRFHHFKSGKCSCNDYW 762



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 261/532 (49%), Gaps = 27/532 (5%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L S ++  + +EA     EM  +D+     ++  + +A   ++ L+ G+ IH  + +   
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             S  ++ N L+ MY  CGS + DV KVFD +  K+ VSW  +I+   + G+ + A+  F
Sbjct: 119 NPSG-SIENCLLRMYCDCGSCI-DVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLF 176

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
             M  S + P+S   +S+  +C   S    L LG+Q+H + +R     N  +  A+  MY
Sbjct: 177 SDMQASGIRPNSAVYMSLLQSCLGPSF---LELGKQIHSHVIRAQLNANITVETAICNMY 233

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
            + G ++ AK +F   + ++ V+W  ++   +Q  K   A+    +MA+ G++ D    +
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
            VL  C  LE  D G++IH++ ++     + S VG+ LVD Y  C ++E   R F  IS+
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKLGAESEVS-VGTPLVDFYVKCGDIESAYRSFGRISE 352

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
                W+A+I+G+ Q+   E+ + +F  +    G+  N+   +SV  AC           
Sbjct: 353 PNDVSWSALISGFSQSGRLEDCIKIFTSLRS-EGVVLNSFIYTSVFQACAAQANLNMGSQ 411

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
            HG AIK GL    Y ++A++ MYS+ GR++ ++  F+ ++  D V+W  +I+GY   G 
Sbjct: 412 AHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGN 471

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +AL   R MQ+          Y +       +PN++T + VL  C     +A+ K+  
Sbjct: 472 AAEALGFFRRMQS----------YGV-------RPNAVTFIAVLTACSHSGLVAEAKQYL 514

Query: 528 AYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
               R+      +     ++D Y++ G L  A  + + MP   + ++W  ++
Sbjct: 515 GSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 27/437 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW+  + + A++ +  +AI  + +M  S I+P++  + ++L++  G   L LGKQIH+HV
Sbjct: 155 SWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHV 214

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMW--DVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           ++     +++TV   + NMY +CG   W      VFD +  ++ V+W  ++    +  K 
Sbjct: 215 IRAQLN-ANITVETAICNMYVRCG---WLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKL 270

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
           ++ALE F  M    VE   F    V   C  L   D   +GRQ+H + +++G E    + 
Sbjct: 271 EVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWD---MGRQIHSHIVKLGAESEVSVG 327

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
             L+  Y K G ++ A   F    + + VSW+ ++S  SQ+ +  + +     +   G+ 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            +     SV  AC+    L+ G + H  A++   L+   +  SA+V MY  C  ++  RR
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG-LVSYLYGESAMVTMYSKCGRLDYARR 446

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            F+ I +     W A+I+GY  +    EAL  F +M+   G+ PNA T  +V+ AC  S 
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSY-GVRPNAVTFIAVLTACSHSG 505

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTV 453
              + +   G      + RD  V+      + ++D YSR G ++ +  + + M    D +
Sbjct: 506 LVAEAKQYLG-----SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAM 560

Query: 454 SWNTMITGYTICGQHGD 470
           SW +++ G   C  H D
Sbjct: 561 SWKSLLGG---CWAHCD 574



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 150/274 (54%), Gaps = 6/274 (2%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           L   G   +   +W   +    ++ +   A+  +  M    ++ D F F  VLK   G++
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           D  +G+QIH+H+VK G   S V+V   LV+ Y KCG D+   Y+ F RI+E + VSW+++
Sbjct: 304 DWDMGRQIHSHIVKLG-AESEVSVGTPLVDFYVKCG-DIESAYRSFGRISEPNDVSWSAL 361

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I+   + G+ +  ++ F  +    V  +SF   SV  AC+    +  L +G Q HG++++
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAA---QANLNMGSQAHGDAIK 418

Query: 212 VGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G  +  +  +A++ MY+K GR+D A+  F+S ++ D V+W  I+S  + +    EA+ F
Sbjct: 419 RGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGF 478

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            R+M   G++P+ V+  +VL ACSH  ++   K+
Sbjct: 479 FRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/673 (36%), Positives = 363/673 (53%), Gaps = 52/673 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           NT   N L++ + K G + +A+ +F +  DR++VSW ++V    +N    EA      M 
Sbjct: 85  NTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP 144

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
            + +    VS   +L        +D  +++       D++   + +G      YC    +
Sbjct: 145 HKNV----VSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGG-----YCEEGRL 195

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  R +FD +  + +  W AM++GY +N   + A  LF  M E   +   A  +      
Sbjct: 196 DEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSG 255

Query: 396 CVRS-----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
            +R      +A P K  +  + + +G G +              G ++ ++ +F  M+ R
Sbjct: 256 RMREASSLFDAMPVKPVVVCNEMIMGFGLN--------------GEVDKARRVFKGMKER 301

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D  +W+ MI  Y   G   +AL L R MQ       R  +            N  +L++V
Sbjct: 302 DNGTWSAMIKVYERKGYELEALGLFRRMQ-------REGL----------ALNFPSLISV 344

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C +L++L  GK++HA  +R+    D+ V S L+ MY KCG L  A++VF+  P+++V
Sbjct: 345 LSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDV 404

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + WN +I  Y  HG G+E L +  +M + G     V P++VTFI + +ACS+SG V EG+
Sbjct: 405 VMWNSMITGYSQHGLGEEALNVFHDMCSSG-----VPPDDVTFIGVLSACSYSGKVKEGL 459

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
           +LF  MK  Y +EP  +HYAC+VDLLGRA +V +A +L+  MP E D A  W +LLGACR
Sbjct: 460 ELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPD-AIVWGALLGACR 518

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
            H  +++ E+A + L  LEP  A  YVLLSN+Y+    W     +R+K+K   V K PGC
Sbjct: 519 THMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGC 578

Query: 751 SWIEFGDEIHKFLAGDGS-HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET 809
           SWIE   ++H F  GD   H +   +   LE L   +R+ GY PD S VLH+V+EEEK  
Sbjct: 579 SWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTH 638

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            L  HSEKLA+A+G+L  P G  IRV KNLRVC DCH A K I+K+  REIILRD  RFH
Sbjct: 639 SLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFH 698

Query: 870 HFKNGTCSCGDYW 882
           HFK+G CSC DYW
Sbjct: 699 HFKDGHCSCKDYW 711



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 210/453 (46%), Gaps = 43/453 (9%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFD + +++ VSW SM+    R G    A   F  M + NV   S+T++   L      
Sbjct: 107 RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNV--VSWTVMLGGL------ 158

Query: 195 RRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
               L+ GR      L   + E +   +  ++  Y + GR+D+A+ LF     R++V+W 
Sbjct: 159 ----LQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWT 214

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            +VS  ++N K   A      M  R    + VS  ++L   +H     +G+   A +L +
Sbjct: 215 AMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTH-----SGRMREASSLFD 265

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            + +    V + ++  +    EV+  RRVF  + ++    W+AMI  Y +  Y+ EAL L
Sbjct: 266 AMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGL 325

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYS 432
           F +M+   GL  N  ++ SV+  CV   +    + +H   ++    +D YV + L+ MY 
Sbjct: 326 FRRMQR-EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYV 384

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G +  +K +F+   ++D V WN+MITGY+   QHG              E+  N  +D
Sbjct: 385 KCGNLVRAKQVFNRFPLKDVVMWNSMITGYS---QHGLG------------EEALNVFHD 429

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEI-HAYAIRNMLATDVVVGSALVDMYAK 551
           +  + +   P+ +T + VL  C     + +G E+      +  +   +   + LVD+  +
Sbjct: 430 MCSSGV--PPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGR 487

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
              +N A ++ + MP+  + I W  ++ A   H
Sbjct: 488 ADQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 198/445 (44%), Gaps = 67/445 (15%)

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           D  K+FD + EKD V+  +MI   C  G+ D A   F  M   NV       V+     S
Sbjct: 166 DARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV-------VTWTAMVS 218

Query: 192 NLSRRDGLRLGRQV------------------HGNSLRVGEWNTF----------IMNAL 223
             +R   + + R++                  + +S R+ E ++           + N +
Sbjct: 219 GYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEM 278

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +  +   G VD A+ +FK  ++RD  +W+ ++    +    LEA+   R+M   G+  + 
Sbjct: 279 IMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNF 338

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            S+ SVL  C  L  LD GK++HA  +R++   D  +V S L+ MY  C  +   ++VF+
Sbjct: 339 PSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQD-LYVASVLITMYVKCGNLVRAKQVFN 397

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
               K + +WN+MITGY Q+   EEAL +F  M   +G+ P+  T   V+ AC  S    
Sbjct: 398 RFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCS-SGVPPDDVTFIGVLSACSYSGKV- 455

Query: 404 DKEGIHGHAI-----KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNT 457
            KEG+          ++  G + Y    L+D+  R  ++  +  + + M +  D + W  
Sbjct: 456 -KEGLELFETMKCKYQVEPGIEHYA--CLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGA 512

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRN--------NVYDL-----DETVLRPKPNS 504
           ++     C  H    +    ++ + + + +N        N+Y       D  VLR K  +
Sbjct: 513 LLGA---CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKA 569

Query: 505 ITLMTVLPGCGALSALAKGKEIHAY 529
            ++ T LPGC   S +   K++H +
Sbjct: 570 RSV-TKLPGC---SWIEVEKKVHMF 590



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +  V V N ++  +G  G ++    +VF  + E+D  +W++MI    R G    AL  FR
Sbjct: 269 VKPVVVCNEMIMGFGLNG-EVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFR 327

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M    +  +  +L+SV   C +L+  D    G+QVH   +R   + + ++ + L+ MY 
Sbjct: 328 RMQREGLALNFPSLISVLSVCVSLASLDH---GKQVHAQLVRSEFDQDLYVASVLITMYV 384

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +  AK +F  F  +D+V WN++++  SQ+    EA+     M   G+ PD V+   
Sbjct: 385 KCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIG 444

Query: 289 VLPACSHLEMLDTGKEI 305
           VL ACS+   +  G E+
Sbjct: 445 VLSACSYSGKVKEGLEL 461



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 3/167 (1%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R   +W   ++   R     EA+  +  M R  +  +  +  +VL     +  L  
Sbjct: 297 GMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDH 356

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           GKQ+HA +V+  +    + VA+ L+ MY KCG ++    +VF+R   KD V WNSMI   
Sbjct: 357 GKQVHAQLVRSEFD-QDLYVASVLITMYVKCG-NLVRAKQVFNRFPLKDVVMWNSMITGY 414

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRL 201
            + G  + AL  F  M  S V P   T + V  ACS   + ++GL L
Sbjct: 415 SQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLEL 461


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/606 (38%), Positives = 353/606 (58%), Gaps = 36/606 (5%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + P   S + +L +C+       G+  H   ++     D   + + L+D Y    +++C 
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYD-MILQTGLLDFYAKVGDLKCA 64

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA-CV 397
           +RVF  +  + +   NAMI+   ++ Y EEA  LF  M E      N+ + +S++   C 
Sbjct: 65  KRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTE-----RNSCSWNSMITCYCK 119

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWN 456
             +    +     + +K     D    NA++D Y +  ++  ++ +F  M   R++V+WN
Sbjct: 120 LGDINSARLMFDCNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWN 174

Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
           TMI+ Y  CG+ G A+ + ++MQ+        NV          KP  +T++++L  C  
Sbjct: 175 TMISAYVQCGEFGTAISMFQQMQS-------ENV----------KPTEVTMVSLLSACAH 217

Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
           L AL  G+ IH Y     L  DVV+G+AL+DMY KCG L  A  VF  +  +N+  WN I
Sbjct: 218 LGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSI 277

Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
           I+  GM+G G+E +     M  EG     +KP+ VTF+ + + CSHSG++S G   F +M
Sbjct: 278 IVGLGMNGRGEEAIAAFIVMEKEG-----IKPDGVTFVGILSGCSHSGLLSAGQRYFSEM 332

Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
              YG+EP  +HY C+VDLLGRAG +++A +LI  MP + +      SLL AC+IH++ +
Sbjct: 333 LGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSM-VLGSLLRACQIHKDTK 391

Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
           +GE   Q L  L+P    +YV LSN+Y+S   WD     RK M + GV K PGCS IE  
Sbjct: 392 LGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVN 451

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
           + +H+F+AGD SH Q  Q++ FL+ +++ ++ +G+VP+T+ VLH++ EEEKE  +  HSE
Sbjct: 452 NIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSE 511

Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
           ++A+AFG+++TPPG TIRV KNLR C+DCH A K IS    REII+RD +RFHHF+NG+C
Sbjct: 512 RIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSC 571

Query: 877 SCGDYW 882
           SC DYW
Sbjct: 572 SCNDYW 577



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 36/427 (8%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R+D+ P   +F  +L++ A   +  LG+  H  ++K G+    + +   L++ Y K G
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI-LQTGLLDFYAKVG 59

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
            D+    +VF  +  +D V+ N+MI+ L + G  + A   F  M     E +S +  S+ 
Sbjct: 60  -DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMI 114

Query: 188 LACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF-ED 245
                L   +  RL      N ++ V  WN     A++  Y K  ++  A+ LF      
Sbjct: 115 TCYCKLGDINSARL--MFDCNPVKDVVSWN-----AIIDGYCKSKQLVAAQELFLLMGSA 167

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+ V+WNT++S+  Q  +F  A+   +QM    +KP  V++ S+L AC+HL  LD G+ I
Sbjct: 168 RNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 227

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
           H Y +R   L  +  +G+AL+DMYC C  +E    VF  +S K I  WN++I G G N  
Sbjct: 228 HGY-IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 286

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLG 418
            EEA+  FI ME+  G+ P+  T   ++  C  S         F +  G++G    L  G
Sbjct: 287 GEEAIAAFIVMEK-EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYG----LEPG 341

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI--CGQHGDALMLLR 476
            + Y    ++D+  R G ++ +  +   M ++     N+M+ G  +  C  H D  +  +
Sbjct: 342 VEHY--GCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLGSLLRACQIHKDTKLGEQ 395

Query: 477 EMQNMEE 483
             Q + E
Sbjct: 396 VTQQLLE 402



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 2/166 (1%)

Query: 27  TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA 86
             A  L L     R   +W   + +  +  +F  AI  + +M   +++P      ++L A
Sbjct: 155 VAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSA 214

Query: 87  VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
            A +  L +G+ IH ++      +  V + N L++MY KCG+ +     VF  ++ K+  
Sbjct: 215 CAHLGALDMGEWIHGYIRTKRLKI-DVVLGNALIDMYCKCGA-LEAAIDVFHGLSRKNIF 272

Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            WNS+I  L   G+ + A+ AF +M    ++P   T V +   CS+
Sbjct: 273 CWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSH 318


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/601 (36%), Positives = 351/601 (58%), Gaps = 25/601 (4%)

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  ++  +L  C+    L  GK  H  A+   ++ D +   + L+++Y  C + +C RRV
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTD-TVTCNILINLYTKCGQNDCARRV 113

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +S + I  WN MI GY  N  D EAL LF +M    G      T+SS + AC    A
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHR-EGTQMTEFTLSSTLCACAAKYA 172

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             + + +H  AIKL L    +V  A +D+Y++   I+ +  +F++M  + +V+W+++  G
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +   G H + L L +  Q       R  +          +    T+ ++L  C +L+ + 
Sbjct: 233 FVQNGLHEEVLCLFQSTQ-------REGM----------QLTEFTVSSILSTCASLALII 275

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           +G ++HA  +++    ++ V ++LVD+YAKCG +  +  VF  M  +NV+ WN +I ++ 
Sbjct: 276 EGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFS 335

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            H    E + L + M   G     + PNEVT++++ +ACSH+G+V EG   F  +  D  
Sbjct: 336 RHAHSWEAMILFEKMQQVG-----IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRT 390

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            EP+  HY+C+VD+LGR+GK ++A++L++ MP E   A  W SLLG+ RIH+N+ +  IA
Sbjct: 391 AEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFE-PTASMWGSLLGSSRIHKNIRLARIA 449

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ LF LEP+   ++VLLSN+Y+++  W+  +  RK +++ G +KE G SWIE   +IH 
Sbjct: 450 AEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHV 509

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+AG+  H     ++  LE +   MRK  +  +T C LH+V+ ++KE LL  HSEKLA A
Sbjct: 510 FVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFA 569

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+++ PP   I + KNLR+C DCH   K +S I  R++I+RD+ RFHHFK+G+CSCGD+
Sbjct: 570 FGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDF 629

Query: 882 W 882
           W
Sbjct: 630 W 630



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 196/388 (50%), Gaps = 24/388 (6%)

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
           FTL  +   C+   +R  L +G+  HG ++  G   +T   N L+ +Y K G+ D A+ +
Sbjct: 57  FTLHELLQLCA---KRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F +   R ++SWNT+++  + N + +EA+    +M   G +    +++S L AC+    +
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAI 173

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              K++H  A++   L  +SFVG+A +D+Y  C  ++    VF+ + +K    W+++  G
Sbjct: 174 IECKQLHTIAIK-LALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           + QN   EE L LF +  +  G+     T+SS++  C       +   +H   +K G  R
Sbjct: 233 FVQNGLHEEVLCLF-QSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHR 291

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           + +V  +L+D+Y++ G+IE S  +F DME ++ V WN MI  ++      +A++L  +MQ
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQ 351

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT-D 538
            +        ++          PN +T +++L  C     + +G+      + +  A  +
Sbjct: 352 QV-------GIF----------PNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPN 394

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMP 566
           V+  S +VD+  + G  + A ++ D MP
Sbjct: 395 VLHYSCMVDVLGRSGKTDEAWKLLDKMP 422



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 214/423 (50%), Gaps = 20/423 (4%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D F    +L+  A  + L +GK  H   + +G    +VT  N L+N+Y KCG +     +
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVT-CNILINLYTKCGQNDC-ARR 112

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VFD ++ +  +SWN+MIA      +   AL+ F  M     + + FTL S   AC   + 
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCAC---AA 169

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           +  +   +Q+H  ++++  + ++F+  A + +YAK   + DA  +F++  ++  V+W+++
Sbjct: 170 KYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSL 229

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
            +   QN    E +   +     G++    +++S+L  C+ L ++  G ++HA  +++  
Sbjct: 230 FAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHG- 288

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              N FV ++LVD+Y  C ++E    VF  + +K + LWNAMI  + ++ +  EA++LF 
Sbjct: 289 FHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFE 348

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ------NALM 428
           KM++V G++PN  T  S++ AC  S     +EG H   + L    DR  +      + ++
Sbjct: 349 KMQQV-GIFPNEVTYLSILSAC--SHTGLVEEGRHYFNLLLS---DRTAEPNVLHYSCMV 402

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           D+  R G+ + +  + D M    T S W +++    I      A +   ++  +E E   
Sbjct: 403 DVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGG 462

Query: 488 NNV 490
           N+V
Sbjct: 463 NHV 465



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 139/286 (48%), Gaps = 6/286 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     + +  EA+  +  M R   Q   F   + L A A    +   KQ+H   
Sbjct: 124 SWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIA 183

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K     SS  V    +++Y KC   + D   VF+ + EK  V+W+S+ A   + G  + 
Sbjct: 184 IKLALDSSSF-VGTAFLDVYAKCNM-IKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L  F+      ++ + FT+ S+   C++L+    +  G QVH   ++ G   N F+  +
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLAL---IIEGTQVHAVIVKHGFHRNLFVATS 298

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ +YAK G+++ +  +F   E++++V WN +++S S++    EA++   +M   GI P+
Sbjct: 299 LVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPN 358

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
            V+  S+L ACSH  +++ G+      L +     N    S +VD+
Sbjct: 359 EVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 390/739 (52%), Gaps = 68/739 (9%)

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL-RLGRQVHGNSL 210
           I+ L R G+ + A + F  + Y  +  S  ++VS   A       +GL R  RQ+     
Sbjct: 24  ISRLSRIGQINEARKFFDSLRYKAI-GSWNSIVSGYFA-------NGLPREARQMFDE-- 73

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            + E N    N L++ Y K   +++A+ +F+   +R++VSW  +V    Q    +EA + 
Sbjct: 74  -MPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELL 132

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
             +M  R    + VS   +         +D  ++++      D++   + +G        
Sbjct: 133 FWRMPER----NEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGL------ 182

Query: 331 NCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
            CRE  V+  R +FD + ++ +  W  MITGYGQN+  + A  LF  M E   +   +  
Sbjct: 183 -CREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSML 241

Query: 389 MSSVVPACVRS-----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           +   +   +       E  P K  I  +A+ + LG               +G I  ++ +
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGE--------------VGEIVKARRV 287

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           FD ME RD  +W  MI  Y   G   +AL L  +MQ       R  V          +P+
Sbjct: 288 FDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQ-------RQGV----------RPS 330

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
             +L+++L  C  L++L  G+++HA+ +R     DV V S L+ MY KCG L  A+ VFD
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFD 390

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
             P +++I WN II  Y  HG G+E L++   M   G+      PN+VT IA+  ACS+ 
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT-----MPNKVTLIAILTACSYG 445

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G + EG+++F  M+  + + P+ +HY+C VD+LGRAGKV+ A +LIN M  + D A  W 
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPD-ATVWG 504

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           +LLGAC+ H  +++ E+AA+ LF +EP+ A  Y+LLS+I +S   W    ++RK M+   
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKN 564

Query: 744 VRKEPGCSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNV 802
           V K PGCSWIE G ++H F  G   +H +   +   LE     +R+ GY PD S VLH+V
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV 624

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
           +EEEK   L  HSE+LA+A+G+L  P G  IRV KNLRVC DCH A K ISK+  REIIL
Sbjct: 625 DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIIL 684

Query: 863 RDVRRFHHFKNGTCSCGDY 881
           RD  RFHHF NG CSC DY
Sbjct: 685 RDANRFHHFNNGECSCRDY 703



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 207/493 (41%), Gaps = 57/493 (11%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N++V+ Y   G    +  ++FD + E++ VSWN +++   +    + A   F +M   NV
Sbjct: 52  NSIVSGYFANGLPR-EARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNV 110

Query: 177 EPSSFT-----------LVSVALACSNLSRR-------------DGLRLGRQVHGNSLRV 212
              S+T           +V   L    +  R             DG R+        +  
Sbjct: 111 --VSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMP 168

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
           G+ +      ++    + GRVD+A+ +F    +R++++W T+++   QN +   A     
Sbjct: 169 GK-DVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFE 227

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
            M     +   VS  S+L   +    ++  +E         ++  N     A++      
Sbjct: 228 VMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVALGEV 278

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            E+   RRVFD + D+  A W  MI  Y +  ++ EAL LF +M+   G+ P+  ++ S+
Sbjct: 279 GEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQR-QGVRPSFPSLISI 337

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +  C    +      +H H ++     D YV + LM MY + G +  +K +FD    +D 
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDI 397

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           + WN++I+GY   G   +AL +  EM              L  T+    PN +TL+ +L 
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFHEM-------------PLSGTM----PNKVTLIAILT 440

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NV 570
            C     L +G EI          T  V   S  VDM  + G ++ A  + + M ++ + 
Sbjct: 441 ACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDA 500

Query: 571 ITWNVIIMAYGMH 583
             W  ++ A   H
Sbjct: 501 TVWGALLGACKTH 513



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 5/197 (2%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +  V   N ++   G+ G ++    +VFD++ ++D  +W  MI    R G    ALE F 
Sbjct: 262 MKPVIACNAMIVALGEVG-EIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFA 320

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M    V PS  +L+S+   C+ L+    L+ GRQVH + +R   + + ++ + LM MY 
Sbjct: 321 QMQRQGVRPSFPSLISILSVCATLA---SLQYGRQVHAHLVRCQFDGDVYVASVLMTMYV 377

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +  AK +F  F  +D++ WN+I+S  + +    EA+    +M L G  P+ V++ +
Sbjct: 378 KCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIA 437

Query: 289 VLPACSHLEMLDTGKEI 305
           +L ACS+   L+ G EI
Sbjct: 438 ILTACSYGGKLEEGLEI 454



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 47/268 (17%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   +W   +++  R     EA+  + +M R  ++P   +  ++L   A +  L  G+
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGR 351

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HAH+V+  +    V VA+ L+ MY KCG ++     VFDR   KD + WNS+I+    
Sbjct: 352 QVHAHLVRCQFD-GDVYVASVLMTMYVKCG-ELVKAKLVFDRFPSKDIIMWNSIISGYAS 409

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G  + AL+ F  M  S   P+  TL+++  ACS              +G          
Sbjct: 410 HGLGEEALKVFHEMPLSGTMPNKVTLIAILTACS--------------YG---------- 445

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLR 272
                        G++++   +F+S E +  V+     ++  V  L +  K  +A+  + 
Sbjct: 446 -------------GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELIN 492

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLD 300
            M    IKPD     ++L AC     LD
Sbjct: 493 SMT---IKPDATVWGALLGACKTHSRLD 517



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 112/513 (21%), Positives = 196/513 (38%), Gaps = 125/513 (24%)

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           ++NSF  S L        ++   R+ FD +  K I  WN++++GY  N    EA  +F +
Sbjct: 18  VNNSFEISRL----SRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDE 73

Query: 376 MEE---------VAGLWPN-----ATTMSSVVPA------------------CVRSEAF- 402
           M E         V+G   N     A  +  ++P                    V +E   
Sbjct: 74  MPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLF 133

Query: 403 ---PDKEGIHGHAIKLGL-----------------GRDRYVQNALMDMYSRMGRIEISKT 442
              P++  +    +  GL                 G+D      ++    R GR++ ++ 
Sbjct: 134 WRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEARE 193

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           IFD+M  R+ ++W TMITGY   GQ+    +  +  + M                  P+ 
Sbjct: 194 IFDEMRERNVITWTTMITGY---GQNKRVDVARKLFEVM------------------PEK 232

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
             ++  ++L G      +   +E        M    V+  +A++    + G +  ARRVF
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEFFEV----MPMKPVIACNAMIVALGEVGEIVKARRVF 288

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS- 621
           D M  R+  TW  +I AY   G   E LEL   M  +G     V+P+  + I++ + C+ 
Sbjct: 289 DQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQG-----VRPSFPSLISILSVCAT 343

Query: 622 ----------HSGMVSEGMD-----------------LFYKMKDDYGIEPSPD--HYACV 652
                     H+ +V    D                    K K  +   PS D   +  +
Sbjct: 344 LASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSI 403

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWS--SLLGAC----RIHQNVEIGEIAAQNLF 706
           +      G  E+A ++ + MP         +  ++L AC    ++ + +EI E + ++ F
Sbjct: 404 ISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE-SMESKF 462

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
            + P V  HY    ++   A   DKAM++   M
Sbjct: 463 CVTPTV-EHYSCTVDMLGRAGKVDKAMELINSM 494


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/770 (31%), Positives = 420/770 (54%), Gaps = 44/770 (5%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MY +CGS +    + FD +  ++ VSW++MIA   + G    ALE F  M +  V+ ++ 
Sbjct: 1   MYNRCGS-VIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAI 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTL 239
           T VSV  AC++L     + LG+ +H   +  G    +  + N ++ MY K G VD A+ +
Sbjct: 60  TFVSVLDACASLG---AIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREV 116

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+  E ++ V+WNT++++ S++D++ EA   L +M L G++P+ +++ SV+ AC+ ++ +
Sbjct: 117 FERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSI 176

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G+ +H       +  DN+ V +ALV++Y  C ++   R   + I  +    W  ++  
Sbjct: 177 SRGRIVHEIVAGEGLESDNA-VANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAA 235

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y ++ + + A+ +  +M+   G+  ++ T  +++ +CV   A    E IH    + G+  
Sbjct: 236 YARHGHGKRAIAVIKRMDH-EGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIEL 294

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           D  +Q AL+DMY + G  + ++  FD M +VRD   WN ++  Y +  Q  + L +   M
Sbjct: 295 DPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARM 354

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI------R 532
                            ++    P+++T +++L  C +L+AL  G+  H+  +      R
Sbjct: 355 -----------------SLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDR 397

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVF---DLMPVRNVITWNVIIMAYGMHGEGQEV 589
             +A+  ++ +++++MYAKCG L  A+  F         +V+ W+ ++ AY   G  +E 
Sbjct: 398 QAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEA 457

Query: 590 LELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY 649
           L    +M  EG     VKP+ V+F++  A CSHSG+V E +  F  ++ D+GI P+  H+
Sbjct: 458 LRCFYSMQQEG-----VKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHF 512

Query: 650 ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE 709
           AC+VDLL RAG + +A  L+   P     +  W +LL ACR + ++E     A  L  L 
Sbjct: 513 ACLVDLLSRAGWIREAEALMRRAPLGAHHS-TWMTLLSACRTYGDLERARRVAARLASLR 571

Query: 710 PDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH 769
               S Y LL++++  ++ WD   + R+ + E G   +PGCSWIE  + +++F AGD   
Sbjct: 572 S--GSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRL 629

Query: 770 -QQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
             + E++   LE L   +RK GY  D    +H+  E+EK+ LL  HSEK+A+ FG+++TP
Sbjct: 630 LPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTP 689

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
            GT +R+ KN+ VC DCH+  K IS++  R I LRD R FH F +G+CSC
Sbjct: 690 EGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 739



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 271/560 (48%), Gaps = 46/560 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A+     +A+  ++ M    ++ +   F +VL A A +  ++LGK IH  +
Sbjct: 25  SWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITFVSVLDACASLGAIALGKSIHERI 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           V  G     V + NT+VNMYGKCG  D+    +VF+R+  K+ V+WN+MIA   R  ++ 
Sbjct: 85  VADGLLGDDVILGNTIVNMYGKCGEVDL--AREVFERMEAKNTVTWNTMIAACSRHDRYK 142

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEWNTF 218
            A      M    + P+  TLVSV  AC+ +     +  GR VH    G  L   E +  
Sbjct: 143 EAFALLGEMDLDGLRPNKITLVSVIDACAWMQ---SISRGRIVHEIVAGEGL---ESDNA 196

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NAL+ +Y K G++  A+   +  E RD +SW T++++ +++     A+  +++M   G
Sbjct: 197 VANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEG 256

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +K D  +  ++L +C  +  L  G+EIH     + I +D   + +ALVDMY  C   +  
Sbjct: 257 VKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELD-PVLQTALVDMYGKCGNPDAA 315

Query: 339 RRVFDFISD-KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
           RR FD + D + + +WNA++  Y   +  +E L +F +M  + G+ P+A T  S++ AC 
Sbjct: 316 RRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARM-SLQGVAPDAVTFLSILDACA 374

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNA------LMDMYSRMGRIEISKTIFDD---ME 448
              A       H   ++ GL   + V +A      +++MY++ G +  +K  F       
Sbjct: 375 SLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRAR 434

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
             D V+W+ M+  Y+  G   +AL     MQ               E V   KP+S++ +
Sbjct: 435 ASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQ--------------EGV---KPDSVSFV 477

Query: 509 TVLPGCGALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           + + GC + S L +       ++R  + +A      + LVD+ ++ G +  A  +    P
Sbjct: 478 SAIAGC-SHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAP 536

Query: 567 V-RNVITWNVIIMAYGMHGE 585
           +  +  TW  ++ A   +G+
Sbjct: 537 LGAHHSTWMTLLSACRTYGD 556



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 16/278 (5%)

Query: 29  ATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVA 88
           A    L G +TR K SW   L + AR    + AI     M    ++ D+F F  +L++  
Sbjct: 213 AARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV 272

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE-KDQVS 147
            I  L+LG++IH  + + G  L  V +   LV+MYGKCG+      + FDR+ + +D   
Sbjct: 273 AIAALALGEEIHDRLAESGIELDPV-LQTALVDMYGKCGNPD-AARRAFDRMRDVRDVTV 330

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
           WN+++A      +    L  F  M    V P + T +S+  AC++L+    L LGR  H 
Sbjct: 331 WNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLA---ALGLGRLTHS 387

Query: 208 NSLRVGEWNT-------FIMNALMAMYAKLGRVDDAKTLF---KSFEDRDLVSWNTIVSS 257
             L  G ++         +  +++ MYAK G + DAK  F   +     D+V+W+ +V++
Sbjct: 388 RMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 447

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
            SQ     EA+     M   G+KPD VS  S +  CSH
Sbjct: 448 YSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSH 485


>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/612 (39%), Positives = 346/612 (56%), Gaps = 41/612 (6%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFDF 344
           A+VL  CS +  L   K++HA+ LR     + +  F+   ++ +  +  +V    RVFD 
Sbjct: 29  ATVLQTCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 85

Query: 345 ISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
           I +    +WN +I     +    EEA ML+ KM E     P+  T   V+ AC     F 
Sbjct: 86  IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 145

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           + + +H   +K G G D YV N L+ +Y   G +++++ +FD+M  R  VSWN+MI    
Sbjct: 146 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 205

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G++  AL L REMQ   E                  P+  T+ +VL  C  L +L+ G
Sbjct: 206 RFGEYDSALQLFREMQRSFE------------------PDGYTMQSVLSACAGLGSLSLG 247

Query: 524 KEIHAYAIRNM---LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
              HA+ +R     +A DV+V ++L++MY KCG L  A +VF  M  R++ +WN +I+ +
Sbjct: 248 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 307

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
             HG  +E +     MV    +   V+PN VTF+ L  AC+H G V++G   F  M  DY
Sbjct: 308 ATHGRAEEAMNFFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 364

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIHQNVEIGE 699
            IEP+ +HY C+VDL+ RAG + +A  ++  MP + D A  W SLL AC +   +VE+ E
Sbjct: 365 CIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD-AVIWRSLLDACCKKGASVELSE 423

Query: 700 IAAQNLFLLEPDVASH-------YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
             A+N+   + D  S        YVLLS +Y+SA  W+    VRK M E G+RKEPGCS 
Sbjct: 424 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 483

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS--CVLHNVNEEEKETL 810
           IE     H+F AGD SH Q++Q++  L+ + +R+R  GY+PD S   ++   N+  KE  
Sbjct: 484 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYS 543

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSE+LAIAFG++N PP T IR+ KNLRVCNDCH+ TK ISK+ + EII+RD  RFHH
Sbjct: 544 LRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHH 603

Query: 871 FKNGTCSCGDYW 882
           FK+G+CSC DYW
Sbjct: 604 FKDGSCSCLDYW 615



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 15/261 (5%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA + Y +M  R +  PD   FP VLKA A I   S GKQ+H  +VK+G+G   V V N 
Sbjct: 110 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNG 168

Query: 119 LVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+++YG CG  D+    KVFD + E+  VSWNSMI  L RFG++D AL+ FR M  S  E
Sbjct: 169 LIHLYGSCGCLDL--ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FE 225

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIMNALMAMYAKLGRV 233
           P  +T+ SV  AC+ L     L LG   H   LR  +     +  + N+L+ MY K G +
Sbjct: 226 PDGYTMQSVLSACAGLG---SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 282

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLP 291
             A+ +F+  + RDL SWN ++   + + +  EA+ F  +M  +   ++P+ V+   +L 
Sbjct: 283 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 342

Query: 292 ACSHLEMLDTGKEIHAYALRN 312
           AC+H   ++ G++     +R+
Sbjct: 343 ACNHRGFVNKGRQYFDMMVRD 363



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 38/407 (9%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK------CGSDMWDVYKVFDRITEKDQ 145
           D+S  KQ+HA  ++  Y     T+      +YGK        SD+   ++VFD I     
Sbjct: 37  DMSQLKQLHAFTLRTTYPEEPATLF-----LYGKILQLSSSFSDVNYAFRVFDSIENHSS 91

Query: 146 VSWNSMI-ATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             WN++I A      + + A   +R ML      P   T   V  AC+ +    G   G+
Sbjct: 92  FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF---GFSEGK 148

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           QVH   ++ G   + ++ N L+ +Y   G +D A+ +F    +R LVSWN+++ +L +  
Sbjct: 149 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 208

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN---DILIDNS 319
           ++  A+   R+M  R  +PDG ++ SVL AC+ L  L  G   HA+ LR    D+ +D  
Sbjct: 209 EYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD-V 266

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EE 378
            V ++L++MYC C  +    +VF  +  + +A WNAMI G+  +   EEA+  F +M ++
Sbjct: 267 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 326

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL------MDMYS 432
              + PN+ T   ++ AC     F +K    G      + RD  ++ AL      +D+ +
Sbjct: 327 RENVRPNSVTFVGLLIAC-NHRGFVNK----GRQYFDMMVRDYCIEPALEHYGCIVDLIA 381

Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
           R G I  +  +   M ++ D V W +++     C + G ++ L  E+
Sbjct: 382 RAGYITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEI 425


>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 347/628 (55%), Gaps = 59/628 (9%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN-CREVECGRRVFDFIS 346
           S++  C+ L  L   K+IH   L N +L D   VG  +  +  N    +    +V D   
Sbjct: 14  SMVEPCTTLREL---KQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQ 70

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG-LWPNATTMSSVVPACVRSEAFPDK 405
           +  +  +N+MI  + ++     +   + ++   AG L P+  T + +V    +  A    
Sbjct: 71  NPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTG 130

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMY-------------------------------SRM 434
             +HG A+K G   D +VQ+ L+ MY                               ++M
Sbjct: 131 SSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKM 190

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +  ++ +FD M  +D ++WN MI+GY  CGQ  +AL L   MQ       R  V    
Sbjct: 191 GDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQ-------REGV---- 239

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                 K N +++++VL  C  L AL +G+  HAY  RN L   + +G+AL+DMYAKCG 
Sbjct: 240 ------KVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +N A  VF  M  +NV TW+  I    M+G G++ LEL   M     +   V+PNE+TF+
Sbjct: 294 MNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLM-----KQDSVQPNEITFV 348

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           ++   CS  G+V EG   F  M   YGIEP  +HY C+VDL GRAG +++A   IN MP 
Sbjct: 349 SVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPV 408

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
                GAW +LL AC+I++N+E+GE+A++ +  LE      YVLLSNIY+ ++ WD+  +
Sbjct: 409 R-PHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSN 467

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR+ M   GVRK+PGCS IE G E+H+F  GD SH +  ++   L  +S R++  GYV +
Sbjct: 468 VRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVAN 527

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T+ V  ++ EEEKE  LC HSEK+AIAFG+++  P   IR+ KNLRVC DCH ATK ISK
Sbjct: 528 TNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISK 587

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
             +REI++RD  RFHHF++G CSC  YW
Sbjct: 588 AFNREIVVRDRNRFHHFRDGECSCKGYW 615



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 205/486 (42%), Gaps = 65/486 (13%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIH  ++  G       V   + ++     +++    +V D        ++NSMI    
Sbjct: 26  KQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMIRAHS 85

Query: 157 RFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG- 213
           +      +   +  +L+S   + P ++T   +    + L        G  VHG +++ G 
Sbjct: 86  KSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHG---TGSSVHGAAVKYGF 142

Query: 214 EWNTFIMNALMAMYAKLGRVDD-------------------------------AKTLFKS 242
           E++  + + L+ MYA+LG +D                                A+ LF  
Sbjct: 143 EYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDK 202

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
              +D ++WN ++S   Q  +  EA+     M   G+K + VS+ SVL ACSHL  LD G
Sbjct: 203 MSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG 262

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           +  HAY  RN + +  + +G+AL+DMY  C  +     VF  + +K +  W++ I G   
Sbjct: 263 RWAHAYIERNKLRMTLT-LGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAM 321

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV-------RSEAFPDKEGIHGHAIKL 415
           N   E+ L LF  M++ + + PN  T  SV+  C          + F     ++G   +L
Sbjct: 322 NGAGEKCLELFSLMKQDS-VQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRL 380

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV-SWNTMITGYTICGQHGDALML 474
               + Y    ++D+Y R G ++ +    + M VR  V +W  ++    I        + 
Sbjct: 381 ----EHY--GCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELA 434

Query: 475 LREMQNMEEEKN-----RNNVY----DLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
            R++  +E + +      +N+Y    D D      +  ++  +   PGC   S +  G E
Sbjct: 435 SRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGC---SVIEVGGE 491

Query: 526 IHAYAI 531
           +H + +
Sbjct: 492 VHEFFV 497


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 333/601 (55%), Gaps = 28/601 (4%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDN---SFVGSALVDMYCNCREVECGRRV 341
           S+AS++ +    +    G+  HA  ++    +DN   SF+ + LV+MY         + +
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKT---LDNPLPSFIYNHLVNMYSKLDRPNSAQLL 64

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
                ++ +  W A+I G  QN     AL  F  M   + + PN  T      A     +
Sbjct: 65  LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-IQPNDFTFPCAFKASGSLRS 123

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + +H  A+K G   D +V  +  DMYS+ G  E ++ +FD+M  R+  +WN  ++ 
Sbjct: 124 PLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN 183

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
             + G++ DAL    E +    E                 P    + +VL  C  LS L 
Sbjct: 184 SVLEGRYDDALTAFIEARKEGIE-----------------PTDFMVSSVLSACAGLSVLE 226

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK +H  A++  +  ++ VGSALVDMY KCG +  A R FD MP RN++TWN +I  Y 
Sbjct: 227 VGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYA 286

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G+    + L   M     R   V PN VTF+ + +ACS +G V+ GM++F  M+  YG
Sbjct: 287 HQGQADMAVTLFDEMTCGSHR---VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYG 343

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           IEP  +HYACVVDLLGRAG VE AYQ I  MP        W +LLGA ++    E+G++A
Sbjct: 344 IEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIR-PTVSVWGALLGASKMFGKSELGKVA 402

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A NLF L+P  + ++VLLSN++++A  W++A  VRK+MK++G++K  GCSWI  G+ +H 
Sbjct: 403 ADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHV 462

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F A D SH+++ ++   L  L   M   GY+PDTS  L ++ EEEK   +  HSEK+A+A
Sbjct: 463 FQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALA 522

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           FG+++ P G  IR+ KNLR+C DCH A KFIS I  REII+RD   FH F++  CSC DY
Sbjct: 523 FGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDY 582

Query: 882 W 882
           W
Sbjct: 583 W 583



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 204/409 (49%), Gaps = 31/409 (7%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P++ A  +++++    Q   LG+  HA ++K         + N LVNMY K   D  +
Sbjct: 4   LSPNSLA--SLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKL--DRPN 59

Query: 133 VYKVFDRIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
             ++   +T  +  V+W ++IA   + G++  AL  F  M   +++P+ FT      A  
Sbjct: 60  SAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASG 119

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +L  R  L +G+QVH  +++ G+  + F+  +   MY+K G  ++A+ +F    +R++ +
Sbjct: 120 SL--RSPL-VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT 176

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN  +S+     ++ +A+    +    GI+P    ++SVL AC+ L +L+ GK +H  A+
Sbjct: 177 WNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 236

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           +   ++ N FVGSALVDMY  C  +E   R FD + ++ +  WNAMI GY      + A+
Sbjct: 237 KA-CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAV 295

Query: 371 MLFIKM----EEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGR 419
            LF +M      VA   PN  T   V+ AC R+       E F    G +G    +  G 
Sbjct: 296 TLFDEMTCGSHRVA---PNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYG----IEPGA 348

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQ 467
           + Y    ++D+  R G +E +      M +R TVS W  ++    + G+
Sbjct: 349 EHYA--CVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGK 395



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 194/419 (46%), Gaps = 44/419 (10%)

Query: 2   ASSAQCLTLLPSPPLSSLQTH------QPPATTATSLPLPGSQTRCKESWIESLRSEARS 55
           A+ AQ +  L +P  S +  H      +     +  L L  +  R   +W   +    ++
Sbjct: 27  AAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQN 86

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
            +F  A+  +  M R  IQP++F FP   KA   ++   +GKQ+HA  VK G  +S V V
Sbjct: 87  GRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ-ISDVFV 145

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
             +  +MY K G    +  K+FD + E++  +WN+ ++     G++D AL AF       
Sbjct: 146 GCSAFDMYSKAGLTE-EARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEG 204

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR---VGEWNTFIMNALMAMYAKLGR 232
           +EP+ F + SV  AC+ LS    L +G+ VH  +++   VG  N F+ +AL+ MY K G 
Sbjct: 205 IEPTDFMVSSVLSACAGLSV---LEVGKSVHTLAVKACVVG--NIFVGSALVDMYGKCGS 259

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVL 290
           ++DA+  F    +R+LV+WN ++   +   +   AV    +M      + P+ V+   VL
Sbjct: 260 IEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVL 319

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRVFDFISDKK 349
            ACS    ++ G EI   ++R    I+      A +VD+      VE   + + FI    
Sbjct: 320 SACSRAGSVNVGMEIFE-SMRGRYGIEPGAEHYACVVDLLGRAGMVE---QAYQFIKKMP 375

Query: 350 I----ALWNAMITG---YGQNEYDEEAL--------------MLFIKMEEVAGLWPNAT 387
           I    ++W A++     +G++E  + A               +L   M   AG W  AT
Sbjct: 376 IRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEAT 434


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/460 (44%), Positives = 297/460 (64%), Gaps = 23/460 (5%)

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V NAL+DMY++ G  + +  +F+ M  +D +SW +++TG    G + +AL L  EM+   
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMR--- 60

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                         ++   P+ I +  VL  C  L+ L  GK++HA  +++ L + + V 
Sbjct: 61  --------------IMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 106

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           ++LV MYAKCGC+  A +VFD M +++VITW  +I+ Y  +G G+E L    BM+A G  
Sbjct: 107 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASG-- 164

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              VKP+ +TFI L  ACSH+G+V  G   F  M++ YGI+P P+HYAC++DLLGR+GK+
Sbjct: 165 ---VKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKL 221

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            +A +L+N M  + D A  W +LL ACR+H NVE+GE AA NLF LEP  A  YVLLSN+
Sbjct: 222 MEAKELLNQMAVQPD-ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNL 280

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           YS+A  W++A   R+ MK  GV KEPGCSWIE   ++H+F++ D SH ++ +++  ++ +
Sbjct: 281 YSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEI 340

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
              +++ GYVPD +  LH+++EE KE  L  HSEKLA+AFG+L  PPG  IR+ KNLR+C
Sbjct: 341 MILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRIC 400

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A K++S +  R +ILRD   FHHF+ G CSC DYW
Sbjct: 401 GDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 144/281 (51%), Gaps = 19/281 (6%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            + NAL+ MYAK G  D A  +F+   D+D++SW ++V+    N  + EA+    +M + 
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           GI PD + IA+VL AC+ L +L+ GK++HA  L++ +    S V ++LV MY  C  +E 
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLS-VDNSLVSMYAKCGCIED 121

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             +VFD +  + +  W A+I GY QN    E+L  +  M   +G+ P+  T   ++ AC 
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBM-IASGVKPDFITFIGLLFACS 180

Query: 398 RS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
            +         F   E ++G    +  G + Y    ++D+  R G++  +K + + M V+
Sbjct: 181 HAGLVEHGRSYFQSMEEVYG----IKPGPEHYA--CMIDLLGRSGKLMEAKELLNQMAVQ 234

Query: 451 -DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
            D   W  ++     C  HG+  +  R   N+ E + +N V
Sbjct: 235 PDATVWKALLAA---CRVHGNVELGERAANNLFELEPKNAV 272



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 109/190 (57%), Gaps = 5/190 (2%)

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V N LV+MY K G   +  + VF+++T+KD +SW S++      G ++ AL  F  M   
Sbjct: 4   VNNALVDMYAKXGYFDY-AFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRV 233
            + P    + +V  AC+ L+    L  G+QVH N L+ G  ++  + N+L++MYAK G +
Sbjct: 63  GIHPDQIVIAAVLSACAELTV---LEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCI 119

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           +DA  +F S E +D+++W  ++   +QN +  E++ F   M   G+KPD ++   +L AC
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179

Query: 294 SHLEMLDTGK 303
           SH  +++ G+
Sbjct: 180 SHAGLVEHGR 189



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 47/255 (18%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +     +  + EA+  + EM    I PD     AVL A A +  L  GKQ+HA+ 
Sbjct: 35  SWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANF 94

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G G SS++V N+LV+MY KCG  + D  KVFD +  +D ++W ++I    + G+   
Sbjct: 95  LKSGLG-SSLSVDNSLVSMYAKCGC-IEDANKVFDSMEIQDVITWTALIVGYAQNGRGRE 152

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           +L  +  M+ S V+P   T + +  ACS+                               
Sbjct: 153 SLNFYNBMIASGVKPDFITFIGLLFACSH------------------------------- 181

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRG 278
                  G V+  ++ F+S E+   +      +  ++  L ++ K +EA   L QMA   
Sbjct: 182 ------AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA--- 232

Query: 279 IKPDGVSIASVLPAC 293
           ++PD     ++L AC
Sbjct: 233 VQPDATVWKALLAAC 247



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           +V +ALVDMYAK G  ++A  VF+ M  ++VI+W  ++     +G  +E L L   M   
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLLGR 658
           G     + P+++   A+ +AC+   ++  G  +    +K   G   S D+   +V +  +
Sbjct: 63  G-----IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAK 115

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            G +EDA ++ + M  E      W++L+
Sbjct: 116 CGCIEDANKVFDSM--EIQDVITWTALI 141


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/781 (33%), Positives = 405/781 (51%), Gaps = 45/781 (5%)

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           +S+ + NTL+  Y + G  +    ++ D +  ++ VS+N +I    R G   L+LE    
Sbjct: 41  ASLFLRNTLLAAYCRLGGPL-PARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLAR 99

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
              + V+   F+  +   ACS   R   LR GR VH  ++  G     F+ N+L++MY+K
Sbjct: 100 ARRAGVDVDRFSYAAALAACS---RAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSK 156

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G + +A+ +F   E+RD VSWN++VS   +     E V     M   G+  +  ++ SV
Sbjct: 157 CGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSV 216

Query: 290 LPACSHLE--MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           +  CS      +D  + +H   ++   L  + F+ SA++DMY     +     +F  + +
Sbjct: 217 IKCCSGRGDGTMDIAEAVHGCVIKAG-LDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275

Query: 348 KKIALWNAMITGYGQNE------YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
             + ++N MI G+ + E         EAL L+ +++   G+ P   T SSV+ AC  +  
Sbjct: 276 PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGY 334

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IHG  IK     D ++ +AL+D+Y   G +E     F      D V+W  M++G
Sbjct: 335 LEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSG 394

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                 H  AL L  E                       KP+  T+ +V+  C +L+   
Sbjct: 395 CVQNELHEKALSLFHESLGAG-----------------LKPDLFTISSVMNACASLAVAR 437

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G++I  +A ++      V+G++ V MYA+ G ++ A R F  M   +V++W+ +I  + 
Sbjct: 438 AGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHA 497

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG  ++ L     MV       +V PNE+TF+ +  ACSH G+V EG+  +  M  DYG
Sbjct: 498 QHGCARDALHFFDEMV-----DAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYG 552

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P+  H  CVVDLLGRAG++ DA   I+      D    W SLL +CRIH+++E G++ 
Sbjct: 553 LSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPV-IWRSLLASCRIHRDLERGQLV 611

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A  +  LEP  ++ YV+L N+Y  A     A   R  MK+ GV+KEPG SWIE    +H 
Sbjct: 612 ANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+AGD SH +S  ++  LE +  R+ K     DT      +++ E+  + C HSEKLA+A
Sbjct: 672 FVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT-----EISKREQNLMNC-HSEKLAVA 724

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            G+++ P    IRV KNLRVC DCH   K ISK E+REIILRD  RFHHF++G+CSC DY
Sbjct: 725 LGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADY 784

Query: 882 W 882
           W
Sbjct: 785 W 785



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/544 (30%), Positives = 273/544 (50%), Gaps = 42/544 (7%)

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
           R+ +  D F++ A L A +    L  G+ +HA  +  G   S V V+N+LV+MY KCG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLS-SGVFVSNSLVSMYSKCG-E 159

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M +  +VFD   E+D VSWNS+++   R G  +  +  F MM    +  +SF L SV   
Sbjct: 160 MGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219

Query: 190 CSNLSRRDG-LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           CS   R DG + +   VHG  ++ G + + F+++A++ MYAK G + +A  LF+S ++ +
Sbjct: 220 CSG--RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277

Query: 248 LVSWNTIVSSLSQNDKFL------EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           +V +NT+++   + +  +      EA+    ++  RG++P   + +SVL AC+    L+ 
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK+IH   ++     D+ F+GSAL+D+Y N   +E G R F       I  W AM++G  
Sbjct: 338 GKQIHGQVIKYTFQEDD-FIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCV 396

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QNE  E+AL LF +    AGL P+  T+SSV+ AC         E I   A K G  R  
Sbjct: 397 QNELHEKALSLFHE-SLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT 455

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + N+ + MY+R G ++ +   F +ME  D VSW+ +I+ +   G   DAL    EM   
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM--- 512

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVV 540
                      +D  V+   PN IT + VL  C     + +G   +    ++  L+  + 
Sbjct: 513 -----------VDAKVV---PNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIK 558

Query: 541 VGSALVDMYAKCGCLN-----FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
             + +VD+  + G L       +  +F   PV     W  ++ +  +H +  E  +L+ N
Sbjct: 559 HCTCVVDLLGRAGRLADAEAFISNSIFHADPV----IWRSLLASCRIHRD-LERGQLVAN 613

Query: 596 MVAE 599
            + E
Sbjct: 614 RIME 617



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 218/448 (48%), Gaps = 41/448 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHA 101
           SW   +    R+    E +  +  M R  +  ++FA  +V+K  +G  D  + + + +H 
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR---- 157
            V+K G   S V + + +++MY K G+ + +   +F  + E + V +N+MIA  CR    
Sbjct: 237 CVIKAGLD-SDVFLVSAMIDMYAKKGA-LVEAAALFRSVQEPNVVMFNTMIAGFCRTETV 294

Query: 158 FGKWDLALEAFRMMLYSNV-----EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
            GK ++A EA  + LYS V     +P+ FT  SV  AC NL+    L  G+Q+HG  ++ 
Sbjct: 295 IGK-EVASEA--LTLYSEVQSRGMQPTEFTFSSVLRAC-NLA--GYLEFGKQIHGQVIKY 348

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
             + + FI +AL+ +Y   G ++D    F+S    D+V+W  +VS   QN+   +A+   
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN-SFVGSALVDMYC 330
            +    G+KPD  +I+SV+ AC+ L +   G++I  +A ++    D  + +G++ V MY 
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYA 466

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +V+   R F  +    +  W+A+I+ + Q+    +AL  F +M + A + PN  T  
Sbjct: 467 RSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITFL 525

Query: 391 SVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIE-----ISKT 442
            V+ AC  S      EG+  +       GL         ++D+  R GR+      IS +
Sbjct: 526 GVLTAC--SHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNS 583

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGD 470
           IF      D V W +++     C  H D
Sbjct: 584 IFHA----DPVIWRSLLAS---CRIHRD 604



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           A  + + + L+  Y + G    ARR+ D MP RN +++N++I AY   G     LE L  
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETL-- 97

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
             A   R G V  +  ++ A  AACS +G +  G
Sbjct: 98  --ARARRAG-VDVDRFSYAAALAACSRAGHLRAG 128


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/582 (39%), Positives = 347/582 (59%), Gaps = 27/582 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K+IHA  LR      NS + + L++      ++   R+VFD +   +I LWN +  GY +
Sbjct: 28  KKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           N+   E+L+L+ KM ++ G+ P+  T   VV A  +   F     +H H +K G G    
Sbjct: 87  NQLPFESLLLYKKMRDL-GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           V   L+ MY + G +  ++ +F+ M+V+D V+WN  +    +C Q G++ + L     M 
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA---VCVQTGNSAIALEYFNKMC 202

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            +                + +S T++++L  CG L +L  G+EI+  A +  +  +++V 
Sbjct: 203 ADA--------------VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +A +DM+ KCG    AR +F+ M  RNV++W+ +I+ Y M+G+ +E L L   M  EG R
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM--KDDYGIEPSPDHYACVVDLLGRAG 660
                PN VTF+ + +ACSH+G+V+EG   F  M   +D  +EP  +HYAC+VDLLGR+G
Sbjct: 309 -----PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
            +E+AY+ I  MP E D  G W +LLGAC +H+++ +G+  A  L    PD+ S++VLLS
Sbjct: 364 LLEEAYEFIKKMPVEPD-TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLS 422

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           NIY++A  WD    VR KM+++G +K    S +EF  +IH F  GD SH QS+ ++  L+
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            + +++RK GYVPDT  V H+V  EEKE  L  HSEKLAIAFG++   PG  IRV KNLR
Sbjct: 483 EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            C+DCH  +KF+S + S EII+RD  RFHHF+NG CSC ++W
Sbjct: 543 TCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 6/270 (2%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W    +   R+    E++L Y +M    ++PD F +P V+KA++ + D S G  +HAHVV
Sbjct: 77  WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           KYG+G   + VA  LV MY K G ++     +F+ +  KD V+WN+ +A   + G   +A
Sbjct: 137 KYGFGCLGI-VATELVMMYMKFG-ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           LE F  M    V+  SFT+VS+  AC  L     L +G +++  + +   + N  + NA 
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLG---SLEIGEEIYDRARKEEIDCNIIVENAR 251

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + M+ K G  + A+ LF+  + R++VSW+T++   + N    EA+     M   G++P+ 
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRND 313
           V+   VL ACSH  +++ GK   +  ++++
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K+IHA V++ G+   +  +   L N+      DM    +VFD + +     WN++     
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLV--VIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           R      +L  ++ M    V P  FT   V  A S L        G  +H + ++ G   
Sbjct: 86  RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG---DFSCGFALHAHVVKYGFGC 142

Query: 217 TFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             I+   L+ MY K G +  A+ LF+S + +DLV+WN  ++   Q      A+ +  +M 
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
              ++ D  ++ S+L AC  L  L+ G+EI+  A + +I   N  V +A +DM+  C   
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC-NIIVENARLDMHLKCGNT 261

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           E  R +F+ +  + +  W+ MI GY  N    EAL LF  M+   GL PN  T   V+ A
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN-EGLRPNYVTFLGVLSA 320

Query: 396 CVRSEAFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           C  S A    EG       +  +   L   ++ Y    ++D+  R G +E +      M 
Sbjct: 321 C--SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMP 376

Query: 449 VR-DTVSWNTMITGYTICGQHGDALM 473
           V  DT  W  ++     C  H D ++
Sbjct: 377 VEPDTGIWGALLGA---CAVHRDMIL 399


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 258/748 (34%), Positives = 414/748 (55%), Gaps = 36/748 (4%)

Query: 58  FREAILSY---IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
           FRE +  +   I+M     Q   F +P+V++AV G+ +L +G+++H  ++K G+    V 
Sbjct: 80  FREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRV- 138

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           +  +LV MYG+    + D  KVFD +  +D V W+S+I+     G +   LE FR M+  
Sbjct: 139 IGTSLVGMYGEL-CFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICE 197

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRV 233
            + P S  L+SVA AC  +     LRL + VHG  +R G   +  + N+L+ MY++ G +
Sbjct: 198 GIRPDSVMLLSVAEACGKIG---CLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYL 254

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             AK LF+  +DR    W +++S+ +QN+ F EA+    +M    ++P+ V++ SVL +C
Sbjct: 255 CRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSC 314

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + L  L  GK +H + LRN + +    +G AL+D Y  C ++    ++   I ++ I  W
Sbjct: 315 ARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSW 374

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N +I+ Y +   ++EA+  F  M    G+ P++ +++S + A   S +    + IHGH +
Sbjct: 375 NTLISFYAREGLNDEAMAFFACM-VAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVM 433

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           K G   D +VQN+LMDMYS+ G    + TIF+ ++ +  V+WN MI G++  G   +AL 
Sbjct: 434 KRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALS 492

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  EM      KNR  +            N +T ++ +  C  L  L KGK IH   I  
Sbjct: 493 LFDEM-----FKNRLEI------------NKVTFLSAIQACSNLGYLDKGKWIHHKIIVT 535

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
               D+ + +ALVDMYAKCG L  A++VFD +  ++V++W+ +I A+G+HG+      L 
Sbjct: 536 GNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLF 595

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             MV        +KPNEVTF+ + +AC H+G V EG   F  M+D YGI P+ +H+A +V
Sbjct: 596 HKMVLS-----NIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIV 650

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLL RAG +  AY++I  +      A  W +LL  CRI+  +++ E  A+ L  +  D  
Sbjct: 651 DLLSRAGDINGAYEIIKSIRTPV-AASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDT 709

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
            +Y LLSNIY+    W ++  VR KM+ MG++K PG S +E   +I++F +GD S  Q +
Sbjct: 710 GYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMK 769

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHN 801
           ++  FLEN     +++G   D  C + N
Sbjct: 770 EICMFLENFQSLAQEQG--SDVECFMFN 795



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 254/521 (48%), Gaps = 30/521 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +     +  +RE +  +  M    I+PD+    +V +A   I  L L K +H +V+
Sbjct: 171 WSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVM 230

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           + G  +   +++N+L+ MY +CG  +    ++F+ I ++    W SMI+   +   ++ A
Sbjct: 231 REGM-VGDGSLSNSLIVMYSQCGY-LCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEA 288

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNA 222
           L+ F  M  S VEP+  T++SV  +C+ L R   L+ G+ VH   LR  +G     +  A
Sbjct: 289 LDVFIKMQDSEVEPNDVTMISVLNSCARLGR---LKEGKSVHCFVLRNAMGVTGLDLGPA 345

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+  Y+   ++   + L  S  + ++VSWNT++S  ++     EA+ F   M  +GI PD
Sbjct: 346 LIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             S+AS + A +    +  G++IH + ++      + FV ++L+DMY  C        +F
Sbjct: 406 SFSLASSISASASSGSIQFGQQIHGHVMKRGFF--DEFVQNSLMDMYSKCGFASSAYTIF 463

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + I  K I  WN MI G+ QN    EAL LF +M +   L  N  T  S + AC      
Sbjct: 464 NKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFK-NRLEINKVTFLSAIQACSNLGYL 522

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IH   I  G   D Y+  AL+DMY++ G ++ ++ +FD +  +  VSW+TMI  +
Sbjct: 523 DKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAH 582

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            I GQ   A  L  +M                  +   KPN +T M +L  C    ++ +
Sbjct: 583 GIHGQINAATSLFHKM-----------------VLSNIKPNEVTFMNILSACRHAGSVKE 625

Query: 523 GKEIHAYAIRNM--LATDVVVGSALVDMYAKCGCLNFARRV 561
           GK  +   +R+   +  +V   +++VD+ ++ G +N A  +
Sbjct: 626 GK-FYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEI 665



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 220/440 (50%), Gaps = 28/440 (6%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R    W   + +  ++  F EA+  +I+M  S+++P++    +VL + A +  L  GK +
Sbjct: 267 RSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSV 326

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  V++   G++ + +   L++ Y  C   M    K+   I  ++ VSWN++I+   R G
Sbjct: 327 HCFVLRNAMGVTGLDLGPALIDFYSACWK-MSSCEKLLHSIGNENIVSWNTLISFYAREG 385

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
             D A+  F  M+   + P SF+L S   A    +    ++ G+Q+HG+ ++ G ++ F+
Sbjct: 386 LNDEAMAFFACMVAKGIMPDSFSLASSISA---SASSGSIQFGQQIHGHVMKRGFFDEFV 442

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            N+LM MY+K G    A T+F   + + +V+WN ++   SQN   +EA+    +M    +
Sbjct: 443 QNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRL 502

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYAL----RNDILIDNSFVGSALVDMYCNCREV 335
           + + V+  S + ACS+L  LD GK IH   +    +ND+ ID     +ALVDMY  C ++
Sbjct: 503 EINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID-----TALVDMYAKCGDL 557

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           +  ++VFD I +K +  W+ MI  +G +     A  LF KM  ++ + PN  T  +++ A
Sbjct: 558 QTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKM-VLSNIKPNEVTFMNILSA 616

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRY--VQN-----ALMDMYSRMGRIEISKTIFDDME 448
           C    A   KEG           RD Y  V N     +++D+ SR G I  +  I   + 
Sbjct: 617 C--RHAGSVKEG----KFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIR 670

Query: 449 VRDTVS-WNTMITGYTICGQ 467
                S W  ++ G  I G+
Sbjct: 671 TPVAASIWGALLNGCRIYGR 690



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 19/217 (8%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H H +   L  +      L++ YS+MG ++ S+ +F      D+  ++ +I  +     
Sbjct: 20  LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHL 79

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             + L L      M  +  +N  +      L P        +V+     +  L  G+++H
Sbjct: 80  FREVLSLFNHHIQMGSKLTQNCAF------LYP--------SVIRAVTGVGELIVGRKLH 125

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              +++    D V+G++LV MY +   L  A++VFD M VR+++ W+ II  Y  +G  +
Sbjct: 126 GRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYR 185

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           E LE+ ++M+ EG     ++P+ V  +++  AC   G
Sbjct: 186 EGLEMFRSMICEG-----IRPDSVMLLSVAEACGKIG 217


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 418/777 (53%), Gaps = 60/777 (7%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   SW   L    ++ +  E++  +IEM RS ++ DN +F  +LK  + +++  LG Q
Sbjct: 143 TRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQ 202

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           IH   ++ GY  + V   + L++MY KC   + + + VF  + +K+ +SW+++IA   + 
Sbjct: 203 IHGIALRMGYD-TDVVSGSALLDMYAKC-KRLDESFTVFYAMPQKNWISWSAIIAGCVQN 260

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
              D  L+ F+ M    V  S     SV  +C+ L     LRLG Q+H ++L+     + 
Sbjct: 261 NFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLP---DLRLGTQLHAHALKSDFVKDG 317

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
            +  A + MYAK   + DA+ LF   E+ +L S+N +++  SQ D    A++  R+++  
Sbjct: 318 IVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKS 377

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            +  D +S++  L AC+ ++ L  G ++H  A +++    N  V +A +DMY  C  ++ 
Sbjct: 378 SLGFDEISLSGALRACATVKGLSEGLQLHGLATKSN-FSRNICVANAFIDMYGKCEALDE 436

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             RVFD +  K    WNA+I  + QNE   + L + + M   +G+ P+  T  SV+ AC 
Sbjct: 437 ACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLR-SGMEPDEYTFGSVLKACA 495

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE----ISKTIF--------- 444
             ++      IH   +KLG+  + Y+ ++L+DMYS+ G I+    I   IF         
Sbjct: 496 -GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTY 554

Query: 445 -------------DDMEVRD-TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
                         D  V++  VSWN +I+GY +  Q  DA      M  M         
Sbjct: 555 SEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMG-------- 606

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                      P+  T  TVL  C  L+++  GK+IHA+ I+  L  DV + S LVDMY+
Sbjct: 607 ---------ITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYS 657

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG L+ +R +F+  P+R+ +TWN +I  Y  HG G+E ++L ++MV        + PN 
Sbjct: 658 KCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLM-----NIMPNH 712

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            TF++L  AC+H G+V  G+D F+ MK +YG++P  +HY+ +VD+LG++G+VE A +LI 
Sbjct: 713 ATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQ 772

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL-LEPDVASHYVLLSNIYSSAQLW 729
            MP E D    W +LL AC+I++N       A N  L L+P  +S Y+LLSNIY+ A +W
Sbjct: 773 EMPFEADDV-IWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMW 831

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
           DKA ++R  M+   ++KEPGCSW+E  DE H FL GD +H + ++++  L  +   M
Sbjct: 832 DKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEM 888



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 177/661 (26%), Positives = 313/661 (47%), Gaps = 102/661 (15%)

Query: 77  NFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKV 136
           NF+F  V K  A  +   LGKQ HAH++  G+   +V V+N L+ +Y  CG ++    K+
Sbjct: 51  NFSF--VFKECAKQRAHELGKQAHAHMIISGFR-PTVFVSNCLLQLYINCG-NLGYATKL 106

Query: 137 FDRITEKDQVSWNSMI-----------ATLC-------RFGKWDLALEAFRM-------- 170
           FD +  +D VSWN+MI           A+LC           W+  L  F          
Sbjct: 107 FDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESV 166

Query: 171 -----MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NAL 223
                M  S VE  + +   +   CS L   +  +LG Q+HG +LR+G ++T ++  +AL
Sbjct: 167 KVFIEMGRSGVEFDNKSFSVILKVCSIL---ENYKLGTQIHGIALRMG-YDTDVVSGSAL 222

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK  R+D++ T+F +   ++ +SW+ I++   QN+     +   ++M   G+    
Sbjct: 223 LDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQ 282

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
              ASVL +C+ L  L  G ++HA+AL++D + D   V +A +DMY  C  ++  +R+FD
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDFVKD-GIVRTATLDMYAKCNNMQDAQRLFD 341

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
              +  +  +NAMITGY Q +    AL+LF K+ + + L  +  ++S  + AC   +   
Sbjct: 342 MSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSK-SSLGFDEISLSGALRACATVKGLS 400

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
           +   +HG A K    R+  V NA +DMY +   ++ +  +FD+M  +D VSWN +I  + 
Sbjct: 401 EGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAH- 459

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALA 521
                             E+ + R+   ++  ++LR   +P+  T  +VL  C    +L 
Sbjct: 460 ------------------EQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLN 500

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-------------- 567
            G EIH   ++  +A++  +GS+LVDMY+KCG ++ A ++ + + +              
Sbjct: 501 HGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPET 560

Query: 568 -------------RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
                          +++WN II  Y M  + ++       M+  G     + P++ T+ 
Sbjct: 561 IEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMG-----ITPDKFTYS 615

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDAYQLINMM 672
            +   C++   +  G  +   +      E   D Y C  +VD+  + G + D+  +    
Sbjct: 616 TVLDTCANLASIGLGKQIHAHVIKK---ELQYDVYICSTLVDMYSKCGNLHDSRLMFEKA 672

Query: 673 P 673
           P
Sbjct: 673 P 673



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 32/307 (10%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +    S V   C +  A    +  H H I  G     +V N L+ +Y   G +  +  +F
Sbjct: 48  SVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLF 107

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRN 488
           D M +RD VSWN MI GY        A +    M                Q  E  ++  
Sbjct: 108 DGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVK 167

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
              ++  + +     S ++  +L  C  L     G +IH  A+R    TDVV GSAL+DM
Sbjct: 168 VFIEMGRSGVEFDNKSFSV--ILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDM 225

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           YAKC  L+ +  VF  MP +N I+W+ II     +      L++ K M   G     V  
Sbjct: 226 YAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVG-----VGV 280

Query: 609 NEVTFIALFAACSHSGMVSEGMDLF-YKMKDDY---GIEPSPDHYACVVDLLGRAGKVED 664
           ++  + ++  +C+    +  G  L  + +K D+   GI  +       +D+  +   ++D
Sbjct: 281 SQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTA-----TLDMYAKCNNMQD 335

Query: 665 AYQLINM 671
           A +L +M
Sbjct: 336 AQRLFDM 342



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%)

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           +P  +      V   C    A   GK+ HA+ I +     V V + L+ +Y  CG L +A
Sbjct: 44  KPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYA 103

Query: 559 RRVFDLMPVRNVITWNVIIMAYG 581
            ++FD MP+R+V++WN +I  Y 
Sbjct: 104 TKLFDGMPLRDVVSWNAMIFGYA 126


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/737 (33%), Positives = 385/737 (52%), Gaps = 90/737 (12%)

Query: 203 RQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R +HG+  + G        N L+ +Y K   +D A  LF     ++  +W  ++S  ++ 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 262 DKFLEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DILI 316
               E V  L R+M   G  P+  +++SVL  CS    +  GK IHA+ LRN    D+++
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF--- 373
           +NS     ++D+Y  C+E E     F+ + +K +  WN MI  Y +    E++L +F   
Sbjct: 172 ENS-----ILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226

Query: 374 ----------------------IKMEEVAGLWPNATTMS----SVVPACVRSEAFPD-KE 406
                                 + +E++  +  + T  S    S+    V S +  +   
Sbjct: 227 PNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGR 286

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR---------------- 450
            +HG  +  GL  D Y++++L++MY + GR++ + TI  D+ +                 
Sbjct: 287 QLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKA 346

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
             VSW++M++GY   G++ D +   R M           V +L    +R      T+ T+
Sbjct: 347 RMVSWSSMVSGYVWNGKYEDGMKTFRSM-----------VCELIVVDIR------TVATI 389

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           +  C     L  GK+IHAY  +  L  D  VGS+L+DMY+K G L+ A  +F+ +   NV
Sbjct: 390 ISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNV 449

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           + W  +I    +HG+G+E + L + M+  G     + PNEVTF+ +  ACSH G++ EG 
Sbjct: 450 VLWTSMISGCALHGQGKEAISLFEGMLNLG-----IIPNEVTFVGVLNACSHVGLIEEGC 504

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA-----GAWSSL 685
             F  MKD Y I P  +HY  +V+L GRAG + +A   I      F+ +       W S 
Sbjct: 505 RYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFI------FENSISHFTSVWRSF 558

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           L +CR+H+N  +G+  ++ L    P     Y+LLSN+ SS   WD+A  VR  M + GV+
Sbjct: 559 LSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVK 618

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           K+PG SW++  D+IH F  GD SH Q ++++ +L++L  R+++ GY  D   V+ +V EE
Sbjct: 619 KQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEE 678

Query: 806 EKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
           + E L+  HSEKLA+ F I+NT P T IR+ KNLR+CNDCH   K+ S++  REII+RD 
Sbjct: 679 QGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDT 738

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFHHFK  +CSCG+YW
Sbjct: 739 HRFHHFKQSSCSCGEYW 755



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 217/474 (45%), Gaps = 68/474 (14%)

Query: 43  ESWIESLRSEARSNQFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           ++W   +   AR+    E + S + EM      P+ +   +VLK  +   ++  GK IHA
Sbjct: 99  QTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHA 158

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCG------------------------------SDMW 131
            +++ G G   V + N+++++Y KC                                D+ 
Sbjct: 159 WILRNGVG-GDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVE 217

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
              ++F     KD VSWN++I  L + G   LALE    M+    E S  T     +  S
Sbjct: 218 KSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVS 277

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF------- 243
           +LS    + +GRQ+HG  L  G   + +I ++L+ MY K GR+D A T+ K         
Sbjct: 278 SLSL---VEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRK 334

Query: 244 ---------EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
                        +VSW+++VS    N K+ + +   R M    I  D  ++A+++ AC+
Sbjct: 335 GNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACA 394

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +  +L+ GK+IHAY  +  + ID ++VGS+L+DMY     ++    +F+ I +  + LW 
Sbjct: 395 NAGILEFGKQIHAYIQKIGLRID-AYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWT 453

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           +MI+G   +   +EA+ LF  M  + G+ PN  T   V+ AC  S     +EG       
Sbjct: 454 SMISGCALHGQGKEAISLFEGMLNL-GIIPNEVTFVGVLNAC--SHVGLIEEGCR----Y 506

Query: 415 LGLGRDRYVQN-------ALMDMYSRMGR-IEISKTIFDDMEVRDTVSWNTMIT 460
             + +D Y  N       +++++Y R G  IE    IF++     T  W + ++
Sbjct: 507 FRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 242/551 (43%), Gaps = 78/551 (14%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           + +H H  K G  L  +  AN L+ +Y K  S++   +K+FD IT K+  +W  +I+   
Sbjct: 52  RALHGHYFKKG-SLQILNSANYLLTLYVK-SSNLDHAHKLFDEITHKNTQTWTILISGFA 109

Query: 157 R-FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-- 213
           R  G  +L    FR M      P+ +TL SV   C   SR + ++ G+ +H   LR G  
Sbjct: 110 RAAGSSELVFSLFREMQADGACPNQYTLSSVLKCC---SRENNIQFGKGIHAWILRNGVG 166

Query: 214 ------------------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
                                         E +    N ++  Y + G V+ +  +F++F
Sbjct: 167 GDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            ++D+VSWNTI+  L Q      A+  L  M   G +   V+ +  L   S L +++ G+
Sbjct: 227 PNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGR 286

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV-----FDFISDKKIAL------ 352
           ++H   L    L  + ++ S+LV+MY  C  ++    +      +F+      +      
Sbjct: 287 QLHGRVLTFG-LNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPK 345

Query: 353 -----WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
                W++M++GY  N   E+ +  F  M     +  +  T+++++ AC  +      + 
Sbjct: 346 ARMVSWSSMVSGYVWNGKYEDGMKTFRSM-VCELIVVDIRTVATIISACANAGILEFGKQ 404

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           IH +  K+GL  D YV ++L+DMYS+ G ++ +  IF+ ++  + V W +MI+G  + GQ
Sbjct: 405 IHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQ 464

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEI 526
             +A+ L   M N                 L   PN +T + VL  C  +  + +G +  
Sbjct: 465 GKEAISLFEGMLN-----------------LGIIPNEVTFVGVLNACSHVGLIEEGCRYF 507

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR-VFDLMPVRNVITWNVIIMAYGMHGE 585
                   +  +V   +++V++Y + G L  A+  +F+         W   + +  +H  
Sbjct: 508 RMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKN 567

Query: 586 ---GQEVLELL 593
              G+ V E+L
Sbjct: 568 FNMGKSVSEML 578



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 49/307 (15%)

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           P    +HGH  K G  +     N L+ +Y +   ++ +  +FD++  ++T +W  +I+G+
Sbjct: 49  PSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGF 108

Query: 463 T-ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
               G       L REMQ              D       PN  TL +VL  C   + + 
Sbjct: 109 ARAAGSSELVFSLFREMQ-------------ADGAC----PNQYTLSSVLKCCSRENNIQ 151

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK IHA+ +RN +  DVV+ ++++D+Y KC    +A   F+LM  ++V++WN++I AY 
Sbjct: 152 FGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYL 211

Query: 582 MHGEGQEVLELLKNM----------VAEG------------------SRGGEVKPNEVTF 613
             G+ ++ LE+ +N           + +G                  + G E  P  VTF
Sbjct: 212 REGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSP--VTF 269

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
                  S   +V  G  L  ++   +G+       + +V++ G+ G+++ A  ++  +P
Sbjct: 270 SIALILVSSLSLVEVGRQLHGRVL-TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP 328

Query: 674 PEFDKAG 680
             F + G
Sbjct: 329 LNFLRKG 335



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 12/232 (5%)

Query: 41  CKE------SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS 94
           CKE      SW   +     + ++ + + ++  M    I  D      ++ A A    L 
Sbjct: 341 CKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILE 400

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
            GKQIHA++ K G  + +  V ++L++MY K GS + D   +F++I E + V W SMI+ 
Sbjct: 401 FGKQIHAYIQKIGLRIDAY-VGSSLIDMYSKSGS-LDDALMIFEQIKEPNVVLWTSMISG 458

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVG 213
               G+   A+  F  ML   + P+  T V V  ACS++    +G R  R +        
Sbjct: 459 CALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINP 518

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKT-LFKSFEDRDLVSWNTIVSSLSQNDKF 264
           E   +   +++ +Y + G + +AK  +F++        W + +SS   +  F
Sbjct: 519 EVEHY--TSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNF 568


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/781 (33%), Positives = 405/781 (51%), Gaps = 45/781 (5%)

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           +S+ + NTL+  Y + G  +    ++ D +  ++ VS+N +I    R G   L+LE    
Sbjct: 41  ASLFLRNTLLAAYCRLGGPL-PARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLAR 99

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
              + V+   F+  +   ACS   R   LR GR VH  ++  G     F+ N+L++MY+K
Sbjct: 100 ARRAGVDVDRFSYAAALAACS---RAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSK 156

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G + +A+ +F   E+RD VSWN++VS   +     E V     M   G+  +  ++ SV
Sbjct: 157 CGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSV 216

Query: 290 LPACSHLE--MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           +  CS      +D  + +H   ++   L  + F+ SA++DMY     +     +F  + +
Sbjct: 217 IKCCSGRGDGTMDIAEAVHGCVIKAG-LDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE 275

Query: 348 KKIALWNAMITGYGQNE------YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
             + ++N MI G+ + E         EAL L+ +++   G+ P   T SSV+ AC  +  
Sbjct: 276 PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGY 334

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
               + IHG  IK     D ++ +AL+D+Y   G +E     F      D V+W  M++G
Sbjct: 335 LEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSG 394

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                 H  AL L  E                       KP+  T+ +V+  C +L+   
Sbjct: 395 CVQNELHEKALSLFHESLGAG-----------------LKPDLFTISSVMNACASLAVAR 437

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G++I  +A ++      V+G++ V MYA+ G ++ A R F  M   +V++W+ +I  + 
Sbjct: 438 AGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHA 497

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG  ++ L     MV       +V PNE+TF+ +  ACSH G+V EG+  +  M  DYG
Sbjct: 498 QHGCARDALHFFDEMV-----DAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYG 552

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           + P+  H  CVVDLLGRAG++ DA   I+      D    W SLL +CRIH+++E G++ 
Sbjct: 553 LSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPV-IWRSLLASCRIHRDLERGQLV 611

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A  +  LEP  ++ YV+L N+Y  A     A   R  MK+ GV+KEPG SWIE    +H 
Sbjct: 612 ANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+AGD SH +S  ++  LE +  R+ K     DT      +++ E+  + C HSEKLA+A
Sbjct: 672 FVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT-----EISKREQNLMNC-HSEKLAVA 724

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            G+++ P    IRV KNLRVC DCH   K ISK E+REIILRD  RFHHF++G+CSC DY
Sbjct: 725 LGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADY 784

Query: 882 W 882
           W
Sbjct: 785 W 785



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/453 (33%), Positives = 237/453 (52%), Gaps = 31/453 (6%)

Query: 70  RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
           R+ +  D F++ A L A +    L  G+ +HA  +  G   S V V+N+LV+MY KCG +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLS-SGVFVSNSLVSMYSKCG-E 159

Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
           M +  +VFD   E+D VSWNS+++   R G  +  +  F MM    +  +SF L SV   
Sbjct: 160 MGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219

Query: 190 CSNLSRRDG-LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           CS   R DG + +   VHG  ++ G + + F+++A++ MYAK G + +A  LF+S ++ +
Sbjct: 220 CSG--RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277

Query: 248 LVSWNTIVSSLSQNDKFL------EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
           +V +NT+++   + +  +      EA+    ++  RG++P   + +SVL AC+    L+ 
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           GK+IH   ++     D+ F+GSAL+D+Y N   +E G R F       I  W AM++G  
Sbjct: 338 GKQIHGQVIKYTFQEDD-FIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCV 396

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           QNE  E+AL LF +    AGL P+  T+SSV+ AC         E I   A K G  R  
Sbjct: 397 QNELHEKALSLFHE-SLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT 455

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            + N+ + MY+R G ++ +   F +ME  D VSW+ +I+ +   G   DAL    EM   
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM--- 512

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
                      +D  V+   PN IT + VL  C
Sbjct: 513 -----------VDAKVV---PNEITFLGVLTAC 531



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 215/442 (48%), Gaps = 38/442 (8%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHA 101
           SW   +    R+    E +  +  M R  +  ++FA  +V+K  +G  D  + + + +H 
Sbjct: 177 SWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHG 236

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR---- 157
            V+K G   S V + + +++MY K G+ + +   +F  + E + V +N+MIA  CR    
Sbjct: 237 CVIKAGLD-SDVFLVSAMIDMYAKKGA-LVEAAALFRSVQEPNVVMFNTMIAGFCRTETV 294

Query: 158 FGKWDLALEAFRMMLYSNV-----EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
            GK ++A EA  + LYS V     +P+ FT  SV  AC NL+    L  G+Q+HG  ++ 
Sbjct: 295 IGK-EVASEA--LTLYSEVQSRGMQPTEFTFSSVLRAC-NLA--GYLEFGKQIHGQVIKY 348

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
             + + FI +AL+ +Y   G ++D    F+S    D+V+W  +VS   QN+   +A+   
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN-SFVGSALVDMYC 330
            +    G+KPD  +I+SV+ AC+ L +   G++I  +A ++    D  + +G++ V MY 
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYA 466

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              +V+   R F  +    +  W+A+I+ + Q+    +AL  F +M + A + PN  T  
Sbjct: 467 RSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITFL 525

Query: 391 SVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDMYSRMGRIE-----ISKT 442
            V+ AC  S      EG+  +       GL         ++D+  R GR+      IS  
Sbjct: 526 GVLTAC--SHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNG 583

Query: 443 IFDDMEVRDTVSWNTMITGYTI 464
           IF      D V W +++    I
Sbjct: 584 IFHA----DPVIWRSLLASCRI 601



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
           A  + + + L+  Y + G    ARR+ D MP RN +++N++I AY   G     LE L  
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETL-- 97

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
             A   R G V  +  ++ A  AACS +G +  G
Sbjct: 98  --ARARRAG-VDVDRFSYAAALAACSRAGHLRAG 128


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/642 (37%), Positives = 356/642 (55%), Gaps = 81/642 (12%)

Query: 246 RDLVSWNTIVSSLSQN-DKFLEAVMFLRQMALRGIKPDGVSIASVLPAC----SHLEMLD 300
           +  V+WN++++ +S+   K  EA    +++ ++  +PD VS  ++L +C    S++E   
Sbjct: 4   KTTVTWNSVLAGMSKKRGKLKEA----QELFVKIPEPDAVSYNTML-SCYVRNSNME--- 55

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
                 A A   D+ I ++   + ++  +   ++++  R +F  +  K +  WNAMI+GY
Sbjct: 56  -----RAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGY 110

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            +    + AL LF K               SVV                           
Sbjct: 111 VECGDLDSALKLFEK-----------APFKSVV--------------------------- 132

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
                A++  Y ++GRI +++ +F+ M  ++ V+WN MI GY    +  D + L R M  
Sbjct: 133 --AWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVG 190

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                               +PNS TL + L GC  LSAL  G+++H    ++ L  D  
Sbjct: 191 -----------------FGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTT 233

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            G++L+ MY KCG L    ++F  +P R+V+TWN +I  Y  HGEG++ L L   M+ +G
Sbjct: 234 AGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKG 293

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                +KP+ +TF+A+  AC+H+G    G+  F+ M  DYG+   PDHY C+VDLLGRAG
Sbjct: 294 -----MKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAG 348

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           K+ +A  LI  MP +   A  + +LLGACRIH+N E+ E A+Q L  L+P  A+ YV L+
Sbjct: 349 KLVEAVDLIEKMPFK-PHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLA 407

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
           N+Y++ + WD    VRK MK   V K PG SWIE     H+F +GD  H +   +HG L+
Sbjct: 408 NVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLK 467

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L ++M+  GYVPD    LH+V EE+KE LL  HSEKLAIA+G++  PPGT IRV KNLR
Sbjct: 468 ELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLR 527

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH+A K+IS+IE REII+RD  RFHHFK+G CSC DYW
Sbjct: 528 VCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 171/336 (50%), Gaps = 16/336 (4%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           NT+++ Y +  S+M      F+ +  KD  SWN+MI    +  + D A + F +M   NV
Sbjct: 42  NTMLSCYVR-NSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV 100

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA 236
              +  ++S  + C +L     L+L  +    S  V  W      A++  Y KLGR+  A
Sbjct: 101 VTWN-AMISGYVECGDLD--SALKLFEKAPFKS--VVAWT-----AMITGYMKLGRIGLA 150

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + LF+   +++LV+WN +++   +N +  + V   R M   GI+P+  +++S L  CS L
Sbjct: 151 ERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSEL 210

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  G+++H    ++  L D++  G++L+ MYC C  +E G ++F  +  + +  WNAM
Sbjct: 211 SALQLGRQVHQLVCKSP-LCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAM 269

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD--KEGIHGHAIK 414
           I+GY Q+   ++AL LF +M E  G+ P+  T  +V+ AC  +  F D   +  H  A  
Sbjct: 270 ISGYAQHGEGKKALGLFDEMIE-KGMKPDWITFVAVLMACNHA-GFTDLGVKYFHSMAKD 327

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
            GL         ++D+  R G++  +  + + M  +
Sbjct: 328 YGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 152/360 (42%), Gaps = 28/360 (7%)

Query: 210 LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           +++ E +    N +++ Y +   ++ A+  F+    +D  SWNT+++  +QN +  +A  
Sbjct: 31  VKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARD 90

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
               M  + +      I+  +  C  L+         A  L       +    +A++  Y
Sbjct: 91  LFLIMPTKNVVTWNAMISGYV-ECGDLD--------SALKLFEKAPFKSVVAWTAMITGY 141

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
                +    R+F+ + +K +  WNAMI GY +N   E+ + LF  M    G+ PN++T+
Sbjct: 142 MKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGF-GIQPNSSTL 200

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           SS +  C    A      +H    K  L  D     +L+ MY + G +E    +F  +  
Sbjct: 201 SSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR 260

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           RD V+WN MI+GY   G+   AL L  EM     EK               KP+ IT + 
Sbjct: 261 RDVVTWNAMISGYAQHGEGKKALGLFDEMI----EKGM-------------KPDWITFVA 303

Query: 510 VLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           VL  C        G K  H+ A    L       + +VD+  + G L  A  + + MP +
Sbjct: 304 VLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           +IE+ R+E     FR        M    IQP++    + L   + +  L LG+Q+H  V 
Sbjct: 172 YIENHRAEDGVKLFRT-------MVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVC 224

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K        T   +L++MY KCG  + D +K+F ++  +D V+WN+MI+   + G+   A
Sbjct: 225 KSPL-CDDTTAGTSLISMYCKCGV-LEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKA 282

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           L  F  M+   ++P   T V+V +AC++    D
Sbjct: 283 LGLFDEMIEKGMKPDWITFVAVLMACNHAGFTD 315


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/672 (36%), Positives = 369/672 (54%), Gaps = 68/672 (10%)

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           V  WNT     L++ YAK+G V++   +F     RD VS+NT+++  + N    +A+  L
Sbjct: 89  VYSWNT-----LLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVL 143

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M   G +P   S  + L ACS L  L  GK+IH   +  D L +N+FV +A+ DMY  
Sbjct: 144 VRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVAD-LGENTFVRNAMTDMYAK 202

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C +++  R +FD + DK +  WN MI+GY +     E + LF +M+ ++GL P+  T+S+
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQ-LSGLKPDLVTVSN 261

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ A                                   Y R GR++ ++ +F  +  +D
Sbjct: 262 VLNA-----------------------------------YFRCGRVDDARNLFIKLPKKD 286

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            + W TMI GY   G+  DA ML  +M        R NV          KP+S T+ +++
Sbjct: 287 EICWTTMIVGYAQNGREEDAWMLFGDML-------RRNV----------KPDSYTISSMV 329

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L++L  G+ +H   +   +   ++V SALVDMY KCG    AR +F+ MP+RNVI
Sbjct: 330 SSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVI 389

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN +I+ Y  +G+  E L L + M  E       KP+ +TF+ + +AC ++ MV EG  
Sbjct: 390 TWNAMILGYAQNGQVLEALTLYERMQQE-----NFKPDNITFVGVLSACINADMVKEGQK 444

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  + + +GI P+ DHYAC++ LLGR+G V+ A  LI  MP E      WS+LL  C  
Sbjct: 445 YFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHE-PNYRIWSTLLSVC-A 501

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
             +++  E+AA +LF L+P  A  Y++LSN+Y++   W     VR  MKE   +K    S
Sbjct: 502 KGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYS 561

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
           W+E G+++H+F++ D  H +  +++G L  L   +++ GY PDT+ VLHNV EEEK   +
Sbjct: 562 WVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSI 621

Query: 812 CGHSEKLAIAFGILNTPPGTT-IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
             HSEKLA+AF ++  P G   IR+ KN+RVC+DCH   KF S   SR II+RD  RFHH
Sbjct: 622 SYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHH 681

Query: 871 FKNGTCSCGDYW 882
           F  G CSC D W
Sbjct: 682 FFGGKCSCNDNW 693



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 264/576 (45%), Gaps = 80/576 (13%)

Query: 53  ARSNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           AR+N F +A      M  +  QP D+F    +L   A    LS  + +  ++ K      
Sbjct: 33  ARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTK-----R 87

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V   NTL++ Y K G  + +++ VFD++  +D VS+N++IA     G    AL+    M
Sbjct: 88  DVYSWNTLLSAYAKMGM-VENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRM 146

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAK 229
                +P+ ++ V+   ACS L     LR G+Q+HG  +   +GE NTF+ NA+  MYAK
Sbjct: 147 QEDGFQPTQYSHVNALQACSQLL---DLRHGKQIHGRIVVADLGE-NTFVRNAMTDMYAK 202

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G +D A+ LF    D+++VSWN ++S   +     E +    +M L G+KPD V++++V
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNV 262

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L A                                    Y  C  V+  R +F  +  K 
Sbjct: 263 LNA------------------------------------YFRCGRVDDARNLFIKLPKKD 286

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
              W  MI GY QN  +E+A MLF  M     + P++ T+SS+V +C +  +    + +H
Sbjct: 287 EICWTTMIVGYAQNGREEDAWMLFGDMLR-RNVKPDSYTISSMVSSCAKLASLYHGQVVH 345

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
           G  + +G+     V +AL+DMY + G    ++ IF+ M +R+ ++WN MI GY   GQ  
Sbjct: 346 GKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVL 405

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAY 529
           +AL L   MQ    ++N              KP++IT + VL  C     + +G++    
Sbjct: 406 EALTLYERMQ----QENF-------------KPDNITFVGVLSACINADMVKEGQKYFDS 448

Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQE 588
              + +A  +   + ++ +  + G ++ A  +   MP   N   W+ ++    +  +G  
Sbjct: 449 ISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL---SVCAKGD- 504

Query: 589 VLELLKNMVAEGSRGGEVKPNE----VTFIALFAAC 620
               LKN     S   E+ P      +    L+AAC
Sbjct: 505 ----LKNAELAASHLFELDPRNAGPYIMLSNLYAAC 536



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 170/385 (44%), Gaps = 56/385 (14%)

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           RD Y  N L+  Y++MG +E    +FD M  RD+VS+NT+I  +   G  G AL +L  M
Sbjct: 87  RDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRM 146

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
           Q    +                 P   + +  L  C  L  L  GK+IH   +   L  +
Sbjct: 147 QEDGFQ-----------------PTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGEN 189

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
             V +A+ DMYAKCG ++ AR +FD M  +NV++WN++I  Y   G   E + L   M  
Sbjct: 190 TFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQL 249

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
            G     +KP+ VT   +  A    G V +  +LF K+       P  D       ++G 
Sbjct: 250 SG-----LKPDLVTVSNVLNAYFRCGRVDDARNLFIKL-------PKKDEICWTTMIVGY 297

Query: 659 A--GKVEDAYQLINMMPPEFDKAGAW--SSLLGACRIHQNVEIGEIAAQNLFLLEPD--- 711
           A  G+ EDA+ L   M     K  ++  SS++ +C    ++  G++    + ++  D   
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357

Query: 712 -VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
            V+S    L ++Y    +    +D R   + M +R     + +  G            + 
Sbjct: 358 LVSS---ALVDMYCKCGV---TLDARVIFETMPIRNVITWNAMILG------------YA 399

Query: 771 QSEQLHGFLENLSERMRKEGYVPDT 795
           Q+ Q+   L  L ERM++E + PD 
Sbjct: 400 QNGQVLEAL-TLYERMQQENFKPDN 423



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 114/233 (48%), Gaps = 10/233 (4%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           + LP     C   W   +   A++ +  +A + + +M R +++PD++   +++ + A + 
Sbjct: 280 IKLPKKDEIC---WTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLA 336

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            L  G+ +H  VV  G   +S+ V++ LV+MY KCG  + D   +F+ +  ++ ++WN+M
Sbjct: 337 SLYHGQVVHGKVVVMGID-NSMLVSSALVDMYCKCGVTL-DARVIFETMPIRNVITWNAM 394

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I    + G+   AL  +  M   N +P + T V V  AC N    D ++ G++   +   
Sbjct: 395 ILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN---ADMVKEGQKYFDSISE 451

Query: 212 VGEWNTFIMNALM-AMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQND 262
            G   T    A M  +  + G VD A  L +    + +   W+T++S  ++ D
Sbjct: 452 HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGD 504


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/752 (33%), Positives = 417/752 (55%), Gaps = 40/752 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAVAGIQDLS--LGKQI 99
           SW   + +      + E+++ ++E   TR D  P+ +   + ++A +G+      +  Q+
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKD-SPNEYILSSFIQACSGLDGRGRWMVFQL 170

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
            + +VK G+    V V   L++ Y K G+  +    VFD + EK  V+W +MI+   + G
Sbjct: 171 QSFLVKSGFD-RDVYVGTLLIDFYLKDGNIDY-ARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           +  ++L+ F  ++  NV P  + L +V  ACS L   +G   G+Q+H + LR G E +  
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG---GKQIHAHILRYGLEMDAS 285

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +MN L+  Y K GRV  A  LF    +++++SW T++S   QN    EA+     M+  G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +KPD  + +S+L +C+ L  L  G ++HAY ++ + L ++S+V ++L+DMY  C  +   
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDA 404

Query: 339 RRVFDFISDKKIALWNAMITGY---GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
           R+VFD  +   + L+NAMI GY   G      EAL +F  M     + P+  T  S++ A
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRA 463

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                +    + IHG   K GL  D +  +AL+D+YS    ++ S+ +FD+M+V+D V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N+M  GY    ++ +AL L  E+Q                 + R +P+  T   ++   G
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQ-----------------LSRERPDEFTFANMVTAAG 566

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L+++  G+E H   ++  L  +  + +AL+DMYAKCG    A + FD    R+V+ WN 
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I +Y  HGEG++ L++L+ M++EG     ++PN +TF+ + +ACSH+G+V +G+  F  
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEG-----IEPNYITFVGVLSACSHAGLVEDGLKQFEL 681

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M   +GIEP  +HY C+V LLGRAG++  A +LI  MP +   A  W SLL  C    NV
Sbjct: 682 MLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK-PAAIVWRSLLSGCAKAGNV 739

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           E+ E AA+   L +P  +  + +LSNIY+S  +W +A  VR++MK  GV KEPG SWI  
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGI 799

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
             E+H FL+ D SH ++ Q++  L++L  ++R
Sbjct: 800 NKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 172/623 (27%), Positives = 309/623 (49%), Gaps = 45/623 (7%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F  +L+  A    L     +H  ++ +G  L +  ++N L+N+Y + G  ++   KVF++
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTY-LSNILINLYSRAGGMVY-ARKVFEK 104

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE-PSSFTLVSVALACSNLSRRDG 198
           + E++ VSW++M++     G ++ +L  F     +  + P+ + L S   ACS L  R G
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR-G 163

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             +  Q+    ++ G + + ++   L+  Y K G +D A+ +F +  ++  V+W T++S 
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +  +   ++    Q+    + PDG  +++VL ACS L  L+ GK+IHA+ LR  + +D
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
            S + + L+D Y  C  V    ++F+ + +K I  W  +++GY QN   +EA+ LF  M 
Sbjct: 284 ASLM-NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           +  GL P+    SS++ +C    A      +H + IK  LG D YV N+L+DMY++   +
Sbjct: 343 KF-GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLD 494
             ++ +FD     D V +N MI GY+  G      +AL + R+M+               
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR--------------- 446

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                 +P+ +T +++L    +L++L   K+IH    +  L  D+  GSAL+D+Y+ C C
Sbjct: 447 --FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L  +R VFD M V++++ WN +   Y    E +E L L   +     R     P+E TF 
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER-----PDEFTFA 559

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            +  A  +   V  G + F+      G+E +P     ++D+  + G  EDA++       
Sbjct: 560 NMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK------- 611

Query: 675 EFDKAGA-----WSSLLGACRIH 692
            FD A +     W+S++ +   H
Sbjct: 612 AFDSAASRDVVCWNSVISSYANH 634



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 258/524 (49%), Gaps = 50/524 (9%)

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
           D L     VHG  +  G E +T++ N L+ +Y++ G +  A+ +F+   +R+LVSW+T+V
Sbjct: 58  DLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV 117

Query: 256 SSLSQNDKFLEA-VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK----EIHAYAL 310
           S+ + +  + E+ V+FL     R   P+   ++S + ACS L+    G+    ++ ++ +
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLV 175

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           ++    D  +VG+ L+D Y     ++  R VFD + +K    W  MI+G  +      +L
Sbjct: 176 KSGFDRD-VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            LF ++ E   + P+   +S+V+ AC         + IH H ++ GL  D  + N L+D 
Sbjct: 235 QLFYQLME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y + GR+  +  +F+ M  ++ +SW T+++GY     H +A+ L   M            
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK---------- 343

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                     KP+     ++L  C +L AL  G ++HAY I+  L  D  V ++L+DMYA
Sbjct: 344 -------FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAY---GMHGEGQEVLELLKNMVAEGSRGGEVK 607
           KC CL  AR+VFD+    +V+ +N +I  Y   G   E  E L + ++M     R   ++
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-----RFRLIR 451

Query: 608 PNEVTFIALF---AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
           P+ +TF++L    A+ +  G+  +   L +K    YG+       + ++D+      ++D
Sbjct: 452 PSLLTFVSLLRASASLTSLGLSKQIHGLMFK----YGLNLDIFAGSALIDVYSNCYCLKD 507

Query: 665 AYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLFL 707
           +  + + M  +      W+S+  G  +  +N E     A NLFL
Sbjct: 508 SRLVFDEM--KVKDLVIWNSMFAGYVQQSENEE-----ALNLFL 544



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 38/314 (12%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +HG  I  GL  D Y+ N L+++YSR G +  ++ +F+ M  R+ VSW+TM++    C  
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA---CNH 122

Query: 468 HG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
           HG   ++L++  E     ++                 PN   L + +  C  L    +  
Sbjct: 123 HGIYEESLVVFLEFWRTRKD----------------SPNEYILSSFIQACSGLDGRGRWM 166

Query: 525 --EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
             ++ ++ +++    DV VG+ L+D Y K G +++AR VFD +P ++ +TW  +I     
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
            G     L+L   ++ +      V P+      + +ACS    + EG    +     YG+
Sbjct: 227 MGRSYVSLQLFYQLMED-----NVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGL 280

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE--- 699
           E        ++D   + G+V  A++L N MP +     +W++LL   +  QN    E   
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYK--QNALHKEAME 336

Query: 700 -IAAQNLFLLEPDV 712
              + + F L+PD+
Sbjct: 337 LFTSMSKFGLKPDM 350


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/699 (34%), Positives = 387/699 (55%), Gaps = 33/699 (4%)

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
           GL   R +HG+ ++ G   + F+  +L+ +Y +     DA+ LF    D+++V+W  +++
Sbjct: 91  GLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALIT 150

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             + N +   A+    +M   G  P   ++  +L ACS    +D G+++H Y+++     
Sbjct: 151 GHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADT 210

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIK 375
             S +G++L  +YC   ++E G R F    DK +  W  MI+   ++E Y +  L LF+ 
Sbjct: 211 ITS-MGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLD 269

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           M E  G+ PN  T++SV+  C         + +     K+G   +  V+N+ M +Y R G
Sbjct: 270 MLE-GGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKG 328

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
             + +  +F++M+    ++WN MI+GY        A ++     ++           L  
Sbjct: 329 ETDEAMRLFEEMDSSSIITWNAMISGY--------AQIMDSAKDDLHARSRGFQALKLFR 380

Query: 496 TVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            ++R   KP+  T  ++L  C A+ AL +G++IHA  I+    +DVVV SALV+MY KCG
Sbjct: 381 DLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCG 440

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
            +  A + F  MP R  +TW  +I  Y  HG  Q+ ++L ++MV  G+R     PNE+TF
Sbjct: 441 SIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGAR-----PNEITF 495

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           ++L +ACS++G+V E    F  M+++Y IEP  DHY C+VD+  R G+++DA+  I    
Sbjct: 496 VSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTG 555

Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
            E ++A  WSSL+  CR H N+E+   AA  L  L+P V   YVLL N+Y S   W    
Sbjct: 556 FEPNEA-IWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVA 614

Query: 734 DVRK--KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGY 791
            VRK  K +++GV ++   SWI   D+++ F A D +H Q+ +L+  LENL E+ +  GY
Sbjct: 615 RVRKLAKHEDVGVLRDR--SWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGY 672

Query: 792 VP--DTSCVLHNVNEEEKE-------TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            P  +   +L +  E + +       +L+  HSE+LA+A G+L TPPG T+RV KN+ +C
Sbjct: 673 EPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMC 732

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            DCH + K+ S + +REI++RD +R H FK+G CSCGD+
Sbjct: 733 RDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 277/599 (46%), Gaps = 53/599 (8%)

Query: 11  LPSPPLSSLQTHQP------PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS 64
           +PS  +S   T  P      P  T+ +     S  R     +E+ R E  S         
Sbjct: 4   IPSLAVSGAATAVPAVVPLKPPPTSAAFDKGTSYQRSSAQALENGRLEHESPPRPLDAQE 63

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
            + M R      +  +  +L        L   + +H H+VK G   + + VA +LVN+Y 
Sbjct: 64  AMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTA-ADMFVATSLVNVYM 122

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           +C S   D  ++FD + +K+ V+W ++I       +  LALE F  ML     PS +TL 
Sbjct: 123 RCASSR-DARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLG 181

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            +  ACS   R D   LG+QVHG S++ G +  T + N+L  +Y K G ++     FK  
Sbjct: 182 GMLSACSAARRID---LGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGT 238

Query: 244 EDRDLVSWNTIVSSLSQNDKFLE-AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            D+++++W T++SS ++++ +L+  +     M   G+ P+  ++ SV+  C     +  G
Sbjct: 239 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLG 298

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K++ A+  +      N  V ++ + +Y    E +   R+F+ +    I  WNAMI+GY Q
Sbjct: 299 KQVQAFCYKVGCEA-NLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQ 357

Query: 363 ---NEYDE--------EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
              +  D+        +AL LF  +   + L P+  T SS++  C    A    E IH +
Sbjct: 358 IMDSAKDDLHARSRGFQALKLFRDLVR-SELKPDLFTFSSILSVCSAMMALEQGEQIHAN 416

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            IK G   D  V +AL++MY++ G IE +   F +M  R  V+W +MI+GY+  G+  DA
Sbjct: 417 TIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDA 476

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           + L  +M                  +   +PN IT +++L  C + + L +  E +   +
Sbjct: 477 IQLFEDM-----------------VLSGARPNEITFVSLLSAC-SYAGLVEEAERYFDMM 518

Query: 532 RNMLATDVVVG--SALVDMYAKCGCLN----FARRVFDLMPVRNVITWNVIIMAYGMHG 584
           RN    + +V     +VDM+ + G L+    F +R     P  N   W+ ++     HG
Sbjct: 519 RNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRT-GFEP--NEAIWSSLVAGCRSHG 574



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 220/451 (48%), Gaps = 43/451 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +     +++   A+  ++EM      P ++    +L A +  + + LG+Q+H + 
Sbjct: 144 TWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYS 203

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-D 162
           +KYG   +  ++ N+L  +Y K G D+    + F    +K+ ++W +MI++      + D
Sbjct: 204 IKYGAD-TITSMGNSLCRLYCKSG-DLESGLRAFKGTPDKNVITWTTMISSCAEDENYLD 261

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           L L  F  ML   V P+ FTL SV   C   +R D + LG+QV     +VG E N  + N
Sbjct: 262 LGLSLFLDMLEGGVMPNEFTLTSVMSLCG--ARLD-MSLGKQVQAFCYKVGCEANLPVKN 318

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ-----------NDKFLEAVMF 270
           + M +Y + G  D+A  LF+  +   +++WN ++S  +Q             +  +A+  
Sbjct: 319 STMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R +    +KPD  + +S+L  CS +  L+ G++IHA  ++   L D   V SALV+MY 
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSD-VVVNSALVNMYN 437

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +EC  + F  +  +    W +MI+GY Q+   ++A+ LF  M  ++G  PN  T  
Sbjct: 438 KCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDM-VLSGARPNEITFV 496

Query: 391 SVVPACV------RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE-----I 439
           S++ AC        +E + D      H   L    D Y    ++DM+ R+GR++     I
Sbjct: 497 SLLSACSYAGLVEEAERYFDMMRNEYHIEPL---VDHY--GCMVDMFVRLGRLDDAFSFI 551

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            +T F+  E      W++++ G   C  HG+
Sbjct: 552 KRTGFEPNE----AIWSSLVAG---CRSHGN 575



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 26/252 (10%)

Query: 374 IKMEEVAGLWPNATTMSSV--VP---ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           +  +E  G+  +  T+ S   VP    CV +        +HGH +K G   D +V  +L+
Sbjct: 59  LDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLV 118

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
           ++Y R      ++ +FD M  ++ V+W  +ITG+T+  +   AL +  EM  +       
Sbjct: 119 NVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGR----- 173

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
                        P+  TL  +L  C A   +  G+++H Y+I+    T   +G++L  +
Sbjct: 174 ------------YPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRL 221

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y K G L    R F   P +NVITW  +I +     E +  L+L  ++  +   GG V P
Sbjct: 222 YCKSGDLESGLRAFKGTPDKNVITWTTMISSC---AEDENYLDLGLSLFLDMLEGG-VMP 277

Query: 609 NEVTFIALFAAC 620
           NE T  ++ + C
Sbjct: 278 NEFTLTSVMSLC 289



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 17/226 (7%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            S   + +L  C     L   + +H + ++   A D+ V ++LV++Y +C     ARR+F
Sbjct: 75  QSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLF 134

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D MP +NV+TW  +I  + ++ E    LE+   M+  G       P+  T   + +ACS 
Sbjct: 135 DGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGR-----YPSHYTLGGMLSACSA 189

Query: 623 SGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           +  +  G  +  Y +K  YG +        +  L  ++G +E   +     P +      
Sbjct: 190 ARRIDLGQQVHGYSIK--YGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDK--NVIT 245

Query: 682 WSSLLGACRIHQN-VEIGEIAAQNLFL--LEPDVASHYVLLSNIYS 724
           W++++ +C   +N +++G     +LFL  LE  V  +   L+++ S
Sbjct: 246 WTTMISSCAEDENYLDLG----LSLFLDMLEGGVMPNEFTLTSVMS 287


>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
 gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
          Length = 670

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/649 (37%), Positives = 375/649 (57%), Gaps = 36/649 (5%)

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           +S  + +   +++  L     R ++ D V  A+++  C     +   + +H++ L   + 
Sbjct: 36  NSFGERESLHKSIQLLES---RELELDPVGYAALIRRCGAANAISAARRLHSHIL--SLP 90

Query: 316 IDNS---FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
             NS   F+ + L++MY  C  +   R +F+ +  + +  W   +  +  N    EAL+ 
Sbjct: 91  HSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVF 150

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNALMDM 430
           F +M + +G  P+  T S ++ A  +  A    +G  IH +A   GL  +  V  A++ M
Sbjct: 151 FRRMYQ-SGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISM 209

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME-------- 482
           Y + GR++ ++  F++++ +++V+WN M+T Y + G+  +AL L REM + +        
Sbjct: 210 YGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMI 269

Query: 483 ----EEKNRNNVYDL-----DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
               +        DL     D T L PK    T +TV+  C  LSAL +G+ IHA     
Sbjct: 270 AAYAQHGRGKQALDLYRSMHDTTDLAPKQG--TFVTVIDVCAELSALKQGRAIHARVRAT 327

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
               +++V +ALV MY KCGCL+ A  VF  M +++ I+WN II +Y  HG   + L L 
Sbjct: 328 NFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLY 387

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
           + M  +G     VKP EVTF+ L +ACSH G+V++G+D FY+M+DD+ I+PS  H+ C++
Sbjct: 388 QEMDLQG-----VKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCII 442

Query: 654 DLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
           DLLGR G++ +A  ++  MP + + A  W SLLGAC+ H +++ G  AA  +    P  +
Sbjct: 443 DLLGRGGRLAEAELVLKSMPIQAN-AVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTS 501

Query: 714 SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
             YVLLSNIY++A  W     +RK M   GV+K PG SWIE GD +H+F++GD SH Q E
Sbjct: 502 GGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGE 561

Query: 774 QLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTI 833
           +++  L  + E M+  GYVPDTS V H++ EEEKE LL  HSEKLAI +G +  P  + +
Sbjct: 562 EIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSML 621

Query: 834 RVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           R+ KNLRVC DCH ATKF+S+I  R+I++RD  RFH F+NG+CSC DYW
Sbjct: 622 RIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 192/428 (44%), Gaps = 58/428 (13%)

Query: 197 DGLRLGRQVHGNSLRVGEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
           + +   R++H + L +   N+   F+ N L+ MY K GR+  A+ LF+S   R++ +W  
Sbjct: 74  NAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTV 133

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL--PACSHLEMLDTGKEIHAYALR 311
            +++ S N    EA++F R+M   G +PD V+ + +L   A      +D G+EIH YA R
Sbjct: 134 AMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYA-R 192

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              L+ N  VG+A++ MY  C  ++  R  F+ +  K    WNAM+T Y  +  D EAL 
Sbjct: 193 ISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALE 252

Query: 372 LFIK-------------------------------MEEVAGLWPNATTMSSVVPACVRSE 400
           LF +                               M +   L P   T  +V+  C    
Sbjct: 253 LFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELS 312

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A      IH          +  V NAL+ MY + G ++ +  +F  M+++D +SWNT+I+
Sbjct: 313 ALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIIS 372

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            Y   G    AL+L +EM             DL       KP  +T + +L  C     +
Sbjct: 373 SYAYHGHSDQALLLYQEM-------------DLQGV----KPTEVTFVGLLSACSHGGLV 415

Query: 521 AKGKEIHAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           A G + + Y +++   +   V     ++D+  + G L  A  V   MP++ N + W  ++
Sbjct: 416 ADGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLL 474

Query: 578 MAYGMHGE 585
            A   HG+
Sbjct: 475 GACKTHGD 482



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 215/499 (43%), Gaps = 72/499 (14%)

Query: 26  ATTATSLPL----PGSQTRCKESWIESLRSEARSNQF--REAILSYIEMTRS-DIQPDNF 78
            T  + LPL    P S    K    +   S  R+N F  RE++   I++  S +++ D  
Sbjct: 2   GTIESPLPLKKSTPPSHPLTKWQQQQQNSSSNRANSFGERESLHKSIQLLESRELELDPV 61

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT-VANTLVNMYGKCGSDMWDVYKVF 137
            + A+++       +S  +++H+H++   +  S    +AN L+ MYGKCG   +   ++F
Sbjct: 62  GYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPY-ARELF 120

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           + +  ++  +W   +A     G    AL  FR M  S   P   T  SV LA        
Sbjct: 121 ESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTF-SVILAAIAQMGAA 179

Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT------------------ 238
            +  GR++H  +   G   N  +  A+++MY K GR+DDA+                   
Sbjct: 180 AIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMT 239

Query: 239 -------------LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGV 284
                        LF+   D D V WN ++++ +Q+ +  +A+   R M     + P   
Sbjct: 240 NYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 299

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           +  +V+  C+ L  L  G+ IHA  +R      N  V +ALV MY  C  ++    VF  
Sbjct: 300 TFVTVIDVCAELSALKQGRAIHA-RVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 358

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  K    WN +I+ Y  + + ++AL+L+ +M ++ G+ P   T   ++ AC        
Sbjct: 359 MKLKDEISWNTIISSYAYHGHSDQALLLYQEM-DLQGVKPTEVTFVGLLSACS------- 410

Query: 405 KEGIHGHAIKLGLGRDRYVQN------------ALMDMYSRMGRIEISKTIFDDMEVR-D 451
               HG  +  GL     +Q+             ++D+  R GR+  ++ +   M ++ +
Sbjct: 411 ----HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 466

Query: 452 TVSWNTMITGYTICGQHGD 470
            V W +++     C  HGD
Sbjct: 467 AVQWMSLLGA---CKTHGD 482


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/719 (34%), Positives = 380/719 (52%), Gaps = 71/719 (9%)

Query: 206 HGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           H N+ ++  ++  I   N L + YA   R  D     K F D  L     +V  L + ++
Sbjct: 4   HSNARKLSTFHGLIFKSNLLSSSYASQKRFSD-----KKFFDSKLEDGGVVVERLCRANR 58

Query: 264 FLEAV------MFLR---QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           F EA+        LR   Q+  R  KP   +  +++  CS    L+ GK++H + +R   
Sbjct: 59  FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH-IRTSG 117

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN-------------------- 354
            +    + + ++ MY  C  +   R+VFD + ++ +  WN                    
Sbjct: 118 FVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFD 177

Query: 355 -----------AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
                      AM+TGY + +  EEAL+L+  M+ V    PN  T+SS V A    +   
Sbjct: 178 EMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIR 237

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHGH ++ GL  D  + ++LMDMY + G I+ ++ IFD +  +D VSW +MI  Y 
Sbjct: 238 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYF 297

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
              +  +   L  E+    E                 +PN  T   VL  C  L+    G
Sbjct: 298 KSSRWREGFSLFSELIGSCE-----------------RPNEYTFSGVLNACADLTTEELG 340

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           +++H Y  R          S+L+DMY KCG +  AR V D  P  ++++   +I  Y  +
Sbjct: 341 RQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQN 400

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G+  E L+    ++  G+     KP+ VTF+ + +AC+H+G+V +G++ FY + + + + 
Sbjct: 401 GKPDEALKYFDLLLKSGT-----KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLT 455

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
            + DHY C+VDLL R+G+ E    +++ MP +  K   W+S+LG C  + N+++ E AAQ
Sbjct: 456 HTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKF-LWASVLGGCSTYGNIDLAEEAAQ 514

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            LF +EP+    YV ++NIY++A  W++   +RK+M+E+G+ K+PG SW E   + H F+
Sbjct: 515 ELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFI 574

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
           A D SH    Q+  FL  L ++M++EGYVP TS VLH+V +E+KE  L  HSEKLA+AF 
Sbjct: 575 AADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFA 634

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           IL+T  GT I+V KNLR C DCH A KFISKI  R+I +RD  RFH F+NG CSC DYW
Sbjct: 635 ILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 221/476 (46%), Gaps = 53/476 (11%)

Query: 54  RSNQFREAI--LSYIEMTRSDIQ-------PDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           R+N+F EAI  L   ++ R  +Q       P    +  +++  +  + L  GK++H H+ 
Sbjct: 55  RANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 114

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G+ +  + + N ++ MY KCGS + D  KVFD + E+D  SWN M+      G  + A
Sbjct: 115 TSGF-VPGIVIWNRILGMYAKCGS-LVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEA 172

Query: 165 LEAFRMM--------------------------LYS------NVEPSSFTLVSVALACSN 192
              F  M                          LYS      N +P+ FT+ S   A + 
Sbjct: 173 RNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAA 232

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           +     +R G+++HG+ +R G + +  + ++LM MY K G +D+A+ +F    D+D+VSW
Sbjct: 233 IK---CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSW 289

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
            +++    ++ ++ E      ++     +P+  + + VL AC+ L   + G+++H Y  R
Sbjct: 290 TSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTR 349

Query: 312 NDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
             +  D  SF  S+L+DMY  C  +E  R V D      +    ++I GY QN   +EAL
Sbjct: 350 --VGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEAL 407

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGLGRDRYVQNALMD 429
             F  + + +G  P+  T  +V+ AC  +       E  +    K  L         L+D
Sbjct: 408 KYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVD 466

Query: 430 MYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           + +R GR E  K++  +M ++ +   W +++ G +  G    A    +E+  +E E
Sbjct: 467 LLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE 522



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 170/340 (50%), Gaps = 11/340 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +    + +Q  EA++ Y  M R  + +P+ F   + + A A I+ +  GK+IH H
Sbjct: 186 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGH 245

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +V+ G     V + ++L++MYGKCG  + +   +FD+I +KD VSW SMI    +  +W 
Sbjct: 246 IVRAGLDSDEV-LWSSLMDMYGKCGC-IDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWR 303

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
                F  ++ S   P+ +T   V  AC++L+  +   LGRQVHG   RVG +  +F  +
Sbjct: 304 EGFSLFSELIGSCERPNEYTFSGVLNACADLTTEE---LGRQVHGYMTRVGFDPYSFASS 360

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L+ MY K G ++ A+ +       DLVS  +++   +QN K  EA+ +   +   G KP
Sbjct: 361 SLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKP 420

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D V+  +VL AC+H  +++ G E          L   S   + LVD+       E  + V
Sbjct: 421 DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSV 480

Query: 342 FDFISDKKIA-LWNAMITG---YGQNEYDEEALMLFIKME 377
              +  K    LW +++ G   YG  +  EEA     K+E
Sbjct: 481 LSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 520


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 259/786 (32%), Positives = 416/786 (52%), Gaps = 49/786 (6%)

Query: 12  PSPPLSSLQTHQPPATTATS----------LPLPGSQTRCKESWIESLRSEARSNQFREA 61
           P  P SS++  +P    A S           P P +     +  I SL    + N  REA
Sbjct: 25  PFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISL---CKKNLHREA 81

Query: 62  ILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           + ++    +    P  +  +  ++ A + ++ L  G++IH H++   Y    + + N ++
Sbjct: 82  LKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQ-PDMILQNHIL 140

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           +MYGKCGS + +   +FD +  K+ VSW SMI+   R+G+ D A+  +  ML S   P  
Sbjct: 141 SMYGKCGS-LKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM--NALMAMYAKLGRVDDAKT 238
           FT  S+  +CS L   D  +L RQ+H + L+  E+   ++  NAL++MY K  ++ DA  
Sbjct: 200 FTFGSIVKSCSGL---DDFKLARQLHAHVLK-SEFGADLIAQNALISMYTKFSQMADAIN 255

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLE 297
           +F     +DL+SW ++++  SQ    LEA+   R+M  + + +P+     S   ACS L 
Sbjct: 256 VFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
             D G++IH   ++  +  D  F G +L DMY  C  +E  R VF  I    +  WNA+I
Sbjct: 316 EPDCGRQIHGLCIKFGLGSD-LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAII 374

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            G+      +E+   F +M    GL PN  T+ S++ AC           +H + +K+G 
Sbjct: 375 AGFASVSNAKESSSFFSQMRH-TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF 433

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
             D  V N+L+ MYS+   +  +  +F+D+  + D VSWNT++T      Q G+ L L +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            M                    R KP+ +TL  VL   G +++   G +IH + +++ L 
Sbjct: 494 LM-----------------FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            D+ V +AL++MY KCG L  AR++FD +   ++I+W+ +I+ Y   G G+E  EL + M
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTM 596

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                RG  VKPNE+TF+ +  ACSH GMV EG+ L+  M++DY I P+ +H +C+VDLL
Sbjct: 597 -----RGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLL 651

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
            RAG ++ A   I  MP   D    W +LL AC++H N+E+G+ AA+N+  ++P  ++  
Sbjct: 652 ARAGCLDVAEDFIRQMPFVPDVV-VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAV 710

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           V+L NI++S+  W     +R  M+ M V K PG SWIE  D++H FLA D  H +  +++
Sbjct: 711 VMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIY 770

Query: 777 GFLENL 782
             LE L
Sbjct: 771 TMLEEL 776


>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 349/608 (57%), Gaps = 32/608 (5%)

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC-- 337
           K D V+  + +   S    L    +I AYA+++ I  D SFV   +   +C     E   
Sbjct: 23  KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLI--NFCTESPTESSM 79

Query: 338 --GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
              R +F+ +S+  I ++N+M  GY +     E   LF+++ E  G+ P+  T  S++ A
Sbjct: 80  SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKA 138

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C  ++A  +   +H  ++KLGL  + YV   L++MY+    ++ ++ +FD +     V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCY 198

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N MITGY    +  +AL L REMQ                     KPN ITL++VL  C 
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGK-----------------YLKPNEITLLSVLSSCA 241

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L +L  GK IH YA ++     V V +AL+DM+AKCG L+ A  +F+ M  ++   W+ 
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           +I+AY  HG+ ++ + + + M     R   V+P+E+TF+ L  ACSH+G V EG   F +
Sbjct: 302 MIVAYANHGKAEKSMLMFERM-----RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 356

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
           M   +GI PS  HY  +VDLL  AG +EDAY+ I+ +P        W  LL AC  H N+
Sbjct: 357 MVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPIS-PTPMLWRILLAACSSHNNL 415

Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
           ++ E  ++ +F L+      YV+LSN+Y+  + W+    +RK MK+    K PGCS IE 
Sbjct: 416 DLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEV 475

Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGH 814
            + +H+F +GDG    + +LH  L+ + + ++  GYVPDTS V+H N+N++EKE  L  H
Sbjct: 476 NNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYH 535

Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
           SEKLAI FG+LNTPPGTTIRV KNLRVC DCH A K IS I  R+++ RDV+RFHHF++G
Sbjct: 536 SEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDG 595

Query: 875 TCSCGDYW 882
            CSCGD+W
Sbjct: 596 KCSCGDFW 603



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 6/256 (2%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  +R     E    ++E+    I PDN+ FP++LKA A  + L  G+Q+H   +K G  
Sbjct: 102 RGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD 161

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +V V  TL+NMY +C  D+     VFDRI E   V +N+MI    R  + + AL  FR
Sbjct: 162 -DNVYVCPTLINMYTEC-EDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYA 228
            M    ++P+  TL+SV  +C+ L   D   LG+ +H  + +        +N AL+ M+A
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLD---LGKWIHKYAKKHSFCKYVKVNTALIDMFA 276

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +DDA ++F+    +D  +W+ ++ + + + K  ++++   +M    ++PD ++   
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336

Query: 289 VLPACSHLEMLDTGKE 304
           +L ACSH   ++ G++
Sbjct: 337 LLNACSHTGRVEEGRK 352



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 188/404 (46%), Gaps = 24/404 (5%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATL 155
           QI A+ +K    +  V+    L+N   +    S M     +F+ ++E D V +NSM    
Sbjct: 47  QIQAYAIKSH--IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGY 104

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            RF         F  +L   + P ++T  S+  AC+       L  GRQ+H  S+++G +
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA---VAKALEEGRQLHCLSMKLGLD 161

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N ++   L+ MY +   VD A+ +F    +  +V +N +++  ++ ++  EA+   R+M
Sbjct: 162 DNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + +KP+ +++ SVL +C+ L  LD GK IH YA ++        V +AL+DM+  C  
Sbjct: 222 QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGS 280

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    +F+ +  K    W+AMI  Y  +   E+++++F +M     + P+  T   ++ 
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENVQPDEITFLGLLN 339

Query: 395 ACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT- 452
           AC  +    +        + K G+        +++D+ S  G +E +    D + +  T 
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTP 399

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           + W  ++     C  H +  +          EK    +++LD++
Sbjct: 400 MLWRILLAA---CSSHNNLDL---------AEKVSERIFELDDS 431


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/508 (41%), Positives = 306/508 (60%), Gaps = 27/508 (5%)

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
           E   L P  +  +S++ +C+  +A    + +H      G G D  +   L+++Y     +
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
             ++ +FD +   +   WN +I GY   G +  A+ L  +M +          Y L    
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFD----------YGL---- 172

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P++ T   VL  C ALSA+  G+EIH + ++     DV VG+AL+DMYAKCGC+  
Sbjct: 173 ---VPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS 229

Query: 558 ARRVFDLMPVRN---VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           AR VFD + VR+   V++WN +I  Y MHG   E L+L + M          KP+ +TF+
Sbjct: 230 AREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEM------NRVAKPDHITFV 283

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +ACSH G++ EG   F  M  DY I+P+  HY C+VDLLG +G++++AY LI  M  
Sbjct: 284 GVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV 343

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
             D +G W +LL +C+IH NVE+GEIA + L  LEPD A +YV+LSNIY+ A  W+    
Sbjct: 344 LPD-SGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAK 402

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +RK M +  ++K   CSWIE  +++H FL+GD SH  S++++  LE +   M++ GY P 
Sbjct: 403 LRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPS 462

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  V H+V ++EK  ++C HSE+LAIAFG+++TPPGT + + KNLR+C DCH A KFISK
Sbjct: 463 TGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISK 522

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I  REI +RDV R+HHFK+G CSCGDYW
Sbjct: 523 ITEREITVRDVNRYHHFKDGVCSCGDYW 550



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 155/317 (48%), Gaps = 22/317 (6%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P    + ++L++    + +  GKQ+HA V   G+G  +V +A  LVN+Y  C S +  
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDS-LSS 128

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
              +FDRI + +   WN +I      G ++ A++ +  M    + P +FT   V  AC+ 
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD---L 248
           LS    +  GR++H + ++ G E + F+  AL+ MYAK G V  A+ +F     RD   +
Sbjct: 189 LS---AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           VSWN +++  + +    EA+    +M  R  KPD ++   VL ACSH  +L+ G      
Sbjct: 246 VSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFET 304

Query: 309 ALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKI----ALWNAMITG---Y 360
            +R D  ID +    + +VD+  +   ++     ++ I   K+     +W A++     +
Sbjct: 305 MIR-DYKIDPTVQHYTCMVDLLGHSGRLD---EAYNLIMQMKVLPDSGVWGALLNSCKIH 360

Query: 361 GQNEYDEEALMLFIKME 377
              E  E AL   I++E
Sbjct: 361 ANVELGEIALERLIELE 377



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 11/276 (3%)

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R  ++ G+Q+H      G  ++T I   L+ +Y     +  A+ LF      ++  WN +
Sbjct: 88  RKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVL 147

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +   + N  +  AV    QM   G+ PD  +   VL AC+ L  ++ G+EIH + ++   
Sbjct: 148 IRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGW 207

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL---WNAMITGYGQNEYDEEALM 371
             D  FVG+AL+DMY  C  V   R VFD I  +   L   WNAMITGY  + +  EAL 
Sbjct: 208 EKD-VFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALD 266

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMD 429
           LF +M  VA   P+  T   V+ AC       +        I+     D  VQ+   ++D
Sbjct: 267 LFEEMNRVAK--PDHITFVGVLSACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVD 323

Query: 430 MYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTI 464
           +    GR++ +  +   M+V  D+  W  ++    I
Sbjct: 324 LLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 359



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 150/356 (42%), Gaps = 56/356 (15%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A +  +  A+  Y +M    + PDNF FP VLKA A +  +  G++IH HVV
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ---VSWNSMIATLCRFGKW 161
           + G+    V V   L++MY KCG  +    +VFD+I  +D    VSWN+MI      G  
Sbjct: 204 QTGWE-KDVFVGAALIDMYAKCGC-VGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHA 261

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
             AL+ F  M     +P   T V V  ACS              HG  L  G W  F   
Sbjct: 262 TEALDLFEEM-NRVAKPDHITFVGVLSACS--------------HGGLLEEG-WMFF--- 302

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
                          +T+ + ++ D  +  +  +V  L  + +  EA   + QM    + 
Sbjct: 303 ---------------ETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK---VL 344

Query: 281 PDGVSIASVLPACSHLEMLDTGK-------EIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           PD     ++L +C     ++ G+       E+      N +++ N +  +   +     R
Sbjct: 345 PDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLR 404

Query: 334 EVECGRRVFDFISDKKIALWN---AMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
           ++   RR+   I+   I + N   A ++G   +   +E   ++ ++E V GL   A
Sbjct: 405 KLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDE---IYSELERVGGLMKEA 457


>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 270/823 (32%), Positives = 417/823 (50%), Gaps = 111/823 (13%)

Query: 63  LSYIEMTRSDIQPDNFAF----PAVLKAVAGI----QDLSLGKQIHAHVVKYGYGLSSVT 114
           L+   + +   +P NF+     P      + I      L+LGKQ+H+H +K G+  +   
Sbjct: 9   LTLPPLPKHQTKPPNFSLLHTPPLTSTTYSTILQSSNSLTLGKQLHSHSIKTGF-YNHNF 67

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V   L+ MY    S   D + +FD++T K+  SW +++      G +      F   L  
Sbjct: 68  VQTKLLQMY-SINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCD 126

Query: 175 NV-EPSSFTLVSVAL-ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
            + E   F +  V L  C  L     L LGRQVHG  L+ G   N ++ NAL+ MY K G
Sbjct: 127 GLGEKLDFFVFPVVLNICCGLGD---LELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCG 183

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-------------- 277
            +D+AK + +    +D VSWN+I+++   N    EA+  L  M L               
Sbjct: 184 SLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIG 243

Query: 278 ---------------------GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
                                G+ PD  ++ASVLPACS ++ L  GKE+H Y +R++ L 
Sbjct: 244 GFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHE-LF 302

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            N FV +ALV MY  C +++   ++F   + K  A +N MI GY +N    +A  LF +M
Sbjct: 303 SNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQM 362

Query: 377 EE----------------------------------VAGLWPNATTMSSVVPACVRSEAF 402
           E+                                  + G+ P++ T+ S++         
Sbjct: 363 EQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCI 422

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + IH  AI  GL  + +V  AL++MY +   I  ++  FD++  RDT +WN +I+GY
Sbjct: 423 RQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGY 482

Query: 463 TICGQHGDALMLLREMQNMEEEKN------------RNNVYDL------DETVLRPKPNS 504
             C Q G    L+  M++   E N             N  YDL      +  V   +P+ 
Sbjct: 483 ARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDI 542

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T+  +L  C  L+ + +GK++HAY+IR    +D  +G+ LVDMYAKCG +    +V++ 
Sbjct: 543 YTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNK 602

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +   N++  N ++ AY MHG G+E + + + M+        V+P+ VTF+++ ++C H+G
Sbjct: 603 ISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRML-----DSRVRPDHVTFLSVLSSCVHAG 657

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
            +  G + FY M + Y I P+  HY C+VDLL RAGK+++AYQLI  MP E D    WS+
Sbjct: 658 SIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSV-TWSA 715

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLG C IH+ V +GEIAA+ L  LEP    +YVLL+N+Y+SA  W      R+ M + G+
Sbjct: 716 LLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGM 775

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           +K PGCSWIE  D +H FLA D SHQ+ E+++  L+NL++ +R
Sbjct: 776 QKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 174/652 (26%), Positives = 296/652 (45%), Gaps = 133/652 (20%)

Query: 43  ESWIESLRSEARSNQFREAILSYIEMTRSDI--QPDNFAFPAVLKAVAGIQDLSLGKQIH 100
            SW   LR       F +  + + E     +  + D F FP VL    G+ DL LG+Q+H
Sbjct: 98  HSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVH 157

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG- 159
             V+K+G+ +++V V N L++MYGKCGS + +  KV + +T+KD VSWNS+I      G 
Sbjct: 158 GMVLKHGF-VTNVYVGNALIDMYGKCGS-LDEAKKVLEGMTQKDCVSWNSIITACVANGV 215

Query: 160 ---------------------------------KWDL-ALEAFRMMLYSNVEPSSFTLVS 185
                                             +D+ ++E F  M+ + V P + TL S
Sbjct: 216 VYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLAS 275

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKL-------------- 230
           V  AC   SR   L +G+++HG  +R   + N F+ NAL+ MY +               
Sbjct: 276 VLPAC---SRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFA 332

Query: 231 -----------------GRVDDAKTLFKSFE----DRDLVSWNTIVSSLSQNDKFLEAVM 269
                            G V  AK LF   E    +RD +SWN ++S    N  F +A+M
Sbjct: 333 RKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALM 392

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             R + + GI+PD  ++ S+L   + +  +  GKEIH+ A+    L  NSFVG ALV+MY
Sbjct: 393 LFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKG-LQSNSFVGGALVEMY 451

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYG---------------------------- 361
           C C ++   +  FD IS++  + WNA+I+GY                             
Sbjct: 452 CKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWN 511

Query: 362 -------QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
                  +N+  + A+ LF +M +V+ L P+  T+  ++ AC +       + +H ++I+
Sbjct: 512 SILAGLVENKQYDLAMQLFNEM-QVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIR 570

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            G   D ++   L+DMY++ G I+    +++ +   + V  N M+T Y + G   + +++
Sbjct: 571 AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVI 630

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
            R M              LD    R +P+ +T ++VL  C    ++  G E         
Sbjct: 631 FRRM--------------LDS---RVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYN 673

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           +   +   + +VD+ ++ G L+ A ++   MP+  + +TW+ ++    +H E
Sbjct: 674 ITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKE 725



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + SW   +     +  F +A++ + ++    I+PD+F   ++L   A +  +  GK+I
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI 428

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR-- 157
           H+  +  G   +S  V   LV MY KC +D+      FD I+E+D  +WN++I+   R  
Sbjct: 429 HSIAIVKGLQSNSF-VGGALVEMYCKC-NDIIAAQMAFDEISERDTSTWNALISGYARCN 486

Query: 158 -FGK--------------------------------WDLALEAFRMMLYSNVEPSSFTLV 184
             GK                                +DLA++ F  M  S++ P  +T+ 
Sbjct: 487 QIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVG 546

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
            +  ACS L+    +  G+QVH  S+R G + +  I   L+ MYAK G +     ++   
Sbjct: 547 IILAACSKLAT---IHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKI 603

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            + +LV  N ++++ + +    E ++  R+M    ++PD V+  SVL +C H   +  G 
Sbjct: 604 SNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGY 663

Query: 304 E 304
           E
Sbjct: 664 E 664


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/630 (37%), Positives = 348/630 (55%), Gaps = 59/630 (9%)

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK--PDGVSIASVLPACSHLEMLDTG 302
           DR  V +N ++  L+      +A++    M  +G    PD  +    L +C+  + L  G
Sbjct: 82  DRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLG 141

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           ++IH+   R   L  N FV  + + MY  C   +   ++F+ +  + +  WNAMI+G+  
Sbjct: 142 RQIHSSTARLG-LDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 200

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
                 A+ +F ++  +    P+A TM+S++P+                     +G+ R 
Sbjct: 201 AGLFGRAMDVFRELVALQCPKPDAGTMASILPS---------------------MGKARV 239

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
              AL+            K +FD+M  +  +SWN M+  YT    H +A+ L   MQ   
Sbjct: 240 EDIALL------------KGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDG 287

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
            E                 P+++TL TVLP CG +SAL+ GK IH    R  + + +++ 
Sbjct: 288 IE-----------------PDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLE 330

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL+DMYA CGCL  AR VFD M  R+V++W  II AYG HG G+E ++L + M  +G  
Sbjct: 331 NALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQG-- 388

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              ++P+ + F+A+ AACSH+G++  G   FY M  ++ I P  +HYAC+VDLLGRAG +
Sbjct: 389 ---LEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCI 445

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            +AY  I +MP + ++   W +LLGACRIH N++IG +AA +L  L P    +YVLLSNI
Sbjct: 446 REAYDFIMVMPIKPNER-VWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNI 504

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A  W     VR  M+  G++K PG S  E GD +H F  GD SH QS+ ++  L  L
Sbjct: 505 YARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSEL 564

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
             R+R+ GY P+    LH+V EE+KE  L  HSEKLAIAF ++NT PGT IR+  NLR C
Sbjct: 565 LRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTC 624

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFK 872
           +DCH A K IS I  REIIL+DV R H+ K
Sbjct: 625 SDCHHAAKLISTIAGREIILKDVNRIHYMK 654



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 176/353 (49%), Gaps = 46/353 (13%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQ--PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           LR    ++  R+A+L +  M        PD++ +P  LK+ A    L LG+QIH+   + 
Sbjct: 92  LRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARL 151

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           G    +V VA++ ++MY +CG    D Y++F+ +  +D VSWN+MI+     G +  A++
Sbjct: 152 GLD-GNVFVAHSAISMYARCGRPD-DAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMD 209

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
            FR +              VAL C                       + +   M +++  
Sbjct: 210 VFREL--------------VALQCP----------------------KPDAGTMASILPS 233

Query: 227 YAKLGRVDDA---KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
             K  RV+D    K +F     + L+SWN +++  + N+  +EAV    +M   GI+PD 
Sbjct: 234 MGK-ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDA 292

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++A+VLP+C  +  L  GK IH   ++   +  +  + +AL+DMY NC  ++  R VFD
Sbjct: 293 VTLATVLPSCGEVSALSLGKRIHE-VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFD 351

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
            +  + +  W ++I+ YG++ +  EA+ LF KM    GL P++    +++ AC
Sbjct: 352 SMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCG-QGLEPDSIAFVAILAAC 403



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 13/250 (5%)

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           T+A+ L +M      D+  +  VFD +  K  +SWN+M+A          A+E F  M  
Sbjct: 226 TMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQK 285

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGR 232
             +EP + TL +V  +C  +S    L LG+++H    R    ++ ++ NALM MYA  G 
Sbjct: 286 DGIEPDAVTLATVLPSCGEVS---ALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           + +A+ +F S   RD+VSW +I+S+  ++    EA+    +M  +G++PD ++  ++L A
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 402

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRVFDFISDKKIA 351
           CSH  +LD GK  + Y++ ++  I       A +VD+        C R  +DFI    I 
Sbjct: 403 CSHAGLLDMGKH-YFYSMTSEFHIAPKLEHYACMVDLLG---RAGCIREAYDFIMVMPIK 458

Query: 352 ----LWNAMI 357
               +W A++
Sbjct: 459 PNERVWGALL 468



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 16  LSSLQTHQPPATTATSLPLPGSQTRCKE-----------------SWIESLRSEARSNQF 58
           L +LQ  +P A T  S+     + R ++                 SW   L     +   
Sbjct: 214 LVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMH 273

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
            EA+  ++ M +  I+PD      VL +   +  LSLGK+IH  V+K     SS+ + N 
Sbjct: 274 VEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIH-EVIKRRRMCSSMLLENA 332

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++MY  CG  + +   VFD +  +D VSW S+I+   R G    A++ F  M    +EP
Sbjct: 333 LMDMYANCGC-LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEP 391

Query: 179 SSFTLVSVALACSN 192
            S   V++  ACS+
Sbjct: 392 DSIAFVAILAACSH 405


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 367/628 (58%), Gaps = 56/628 (8%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY---------------- 329
            +++L AC  L+ +  GK++H+    +    D  F+ + L+++Y                
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDK-FISNHLLNLYSKFGELQAAVALFDRM 130

Query: 330 -------CNCR--------EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
                  CN           +E  + +FD + D+ +A WNAM+TG  + E +EEAL+LF 
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFS 190

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M E++ + P+  ++ SV+  C    A    + +H + +K G   +  V  +L  MY + 
Sbjct: 191 RMNELSFM-PDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +   + + + M     V+WNT+++G     Q G    +L +   M+    R       
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGK---AQKGYFEGVLDQYCMMKMAGFR------- 299

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
                  P+ IT ++V+  C  L+ L +GK+IHA A++   +++V V S+LV MY++CGC
Sbjct: 300 -------PDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGC 352

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           L  + + F     R+V+ W+ +I AYG HG+G+E ++L   M  E   G     NE+TF+
Sbjct: 353 LQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPG-----NEITFL 407

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L  ACSH G+  +G+ LF  M   YG++    HY C+VDLLGR+G +E+A  +I  MP 
Sbjct: 408 SLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPV 467

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           + D A  W +LL AC+IH+N EI    A  +  ++P  ++ YVLL+NIYSSA  W    +
Sbjct: 468 KAD-AIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSE 526

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR+ MK+  V+KEPG SW+E  +++H+F  GD  H +  +++ +LE L+  ++++GYVPD
Sbjct: 527 VRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPD 586

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           TS VLH+++ EEKE +L  HSEKLAIAF ++NTP G  IRV KNLRVC+DCH A K+IS+
Sbjct: 587 TSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISE 646

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           I+  EII+RD  RFHHFKNGTCSCGDYW
Sbjct: 647 IKKLEIIVRDSSRFHHFKNGTCSCGDYW 674



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 213/473 (45%), Gaps = 60/473 (12%)

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
           N   ATLC  G    A E+F   +++  EP  F+  ++  AC  L     + LG+Q+H  
Sbjct: 42  NEQFATLCSKGHIREAFESFLSEIWA--EPRLFS--NLLQACIPLK---SVSLGKQLHSL 94

Query: 209 SLRVG-EWNTFIMNALMAMYAK-------------------------------LGRVDDA 236
               G   + FI N L+ +Y+K                               +G ++ A
Sbjct: 95  IFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESA 154

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           K LF    DR++ +WN +V+ L++ +   EA++   +M      PD  S+ SVL  C+HL
Sbjct: 155 KNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHL 214

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  G+++HAY ++      N  VG +L  MY     +  G RV +++ D  +  WN +
Sbjct: 215 GALLAGQQVHAYVMKCGFEC-NLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTL 273

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
           ++G  Q  Y E  L  +  M ++AG  P+  T  SV+ +C         + IH  A+K G
Sbjct: 274 MSGKAQKGYFEGVLDQYCMM-KMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAG 332

Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
              +  V ++L+ MYSR G ++ S   F + + RD V W++MI  Y   GQ  +A+ L  
Sbjct: 333 ASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFN 392

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-L 535
           EM    E++N                N IT +++L  C       KG  +    ++   L
Sbjct: 393 EM----EQENLPG-------------NEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGL 435

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
              +   + LVD+  + GCL  A  +   MPV+ + I W  ++ A  +H   +
Sbjct: 436 KARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 206/459 (44%), Gaps = 48/459 (10%)

Query: 47  ESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           E   +       REA  S++    S+I  +   F  +L+A   ++ +SLGKQ+H+ +   
Sbjct: 43  EQFATLCSKGHIREAFESFL----SEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTS 98

Query: 107 GYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVYKV 136
           G   S   ++N L+N+Y K G                               ++     +
Sbjct: 99  GCS-SDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNL 157

Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
           FD + +++  +WN+M+  L +F   + AL  F  M   +  P  ++L SV   C++L   
Sbjct: 158 FDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLG-- 215

Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             L  G+QVH   ++ G E N  +  +L  MY K G + D + +     D  LV+WNT++
Sbjct: 216 -ALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLM 274

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR-NDI 314
           S  +Q   F   +     M + G +PD ++  SV+ +CS L +L  GK+IHA A++    
Sbjct: 275 SGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGAS 334

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
              +       +   C C  ++   + F    ++ + LW++MI  YG +   EEA+ LF 
Sbjct: 335 SEVSVVSSLVSMYSRCGC--LQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFN 392

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSR 433
           +ME+   L  N  T  S++ AC          G+    + K GL         L+D+  R
Sbjct: 393 EMEQ-ENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGR 451

Query: 434 MGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDA 471
            G +E ++ +   M V+ D + W T+++    C  H +A
Sbjct: 452 SGCLEEAEAMIRSMPVKADAIIWKTLLSA---CKIHKNA 487



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 12/219 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +  +A+   F   +  Y  M  +  +PD   F +V+ + + +  L  GKQIHA  
Sbjct: 269 AWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEA 328

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   S V+V ++LV+MY +CG  + D  K F    E+D V W+SMIA     G+ + 
Sbjct: 329 VKAG-ASSEVSVVSSLVSMYSRCGC-LQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEE 386

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQV---HGNSLRVGEWNTFI 219
           A++ F  M   N+  +  T +S+  ACS+   +D GL L   +   +G   R+  +    
Sbjct: 387 AIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHY---- 442

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
              L+ +  + G +++A+ + +S   + D + W T++S+
Sbjct: 443 -TCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 376/689 (54%), Gaps = 22/689 (3%)

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L   R VHG+  + G   + F+  +L+  Y +     DA+ LF    +R++V+W  +V+ 
Sbjct: 94  LGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTG 153

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            + N +    +    +M   G  P   ++ + L AC     +D GK++H YA++      
Sbjct: 154 YTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESI 213

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE-ALMLFIKM 376
            S +G++L  +Y     ++   R F  I +K +  W  MI+   ++E   E  + LFI M
Sbjct: 214 TS-MGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM 272

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
             + G+ PN  T++SV+  C         + +   + K+G   +  V+N+ M +Y R G 
Sbjct: 273 L-MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGE 331

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYT-ICGQHGDALMLLREMQNMEEEKNRNNVY-DLD 494
            + +  +F+ ME    ++WN MI+GY  I     D      ++Q          ++ DL 
Sbjct: 332 TDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD------DLQARSRGFQALTIFRDLK 385

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
            +V+  KP+  T  ++L  C A+ AL +G++IHA  I++   +DVVV SALV+MY KCGC
Sbjct: 386 RSVM--KPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A + F  MP R  +TW  +I  Y  HG+ QE ++L + M   G     V+PNE+TF+
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG-----VRPNEITFV 498

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           +L +ACS++G+V E    F  MK +Y IEP  DHY C++D+  R G+VEDA+  I     
Sbjct: 499 SLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGF 558

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E ++A  WSSL+  CR H N+E+   AA  L  L+P     Y+LL N+Y S + W     
Sbjct: 559 EPNEA-IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVAR 617

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VRK MK+  V      SWI   D+++ F A D +H Q+ +L+  LENL E+ +  GY P 
Sbjct: 618 VRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPY 677

Query: 795 TSCVLHNVNEEEKETL--LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
            +  L +  ++EK     L  HSE+LA+A G+L TPPG T+RV KN+ +C DCH + K  
Sbjct: 678 QNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLF 737

Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDY 881
           S +E+REII+RD +R H FK+G CSCGD+
Sbjct: 738 SLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 214/427 (50%), Gaps = 37/427 (8%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           ++EM      P ++   A L A     D+ LGKQ+H + +KYG   S  ++ N+L ++Y 
Sbjct: 167 FVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYG-AESITSMGNSLCSLYA 225

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-DLALEAFRMMLYSNVEPSSFTL 183
           K GS +    + F RI EK+ ++W +MI+      +  +L +  F  ML   V P+ FTL
Sbjct: 226 KLGS-LDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTL 284

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            SV   C     R  L LG+QV   S ++G E N  + N+ M +Y + G  D+A  LF+ 
Sbjct: 285 TSVMSLCGT---RLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 341

Query: 243 FEDRDLVSWNTIVSSLSQ-----------NDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            ED  +++WN ++S  +Q             +  +A+   R +    +KPD  + +S+L 
Sbjct: 342 MEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILS 401

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
            CS +  L+ G++IHA  +++  L D   V SALV+MY  C  ++   + F  +  +   
Sbjct: 402 VCSAMMALEQGEQIHAQTIKSGFLSD-VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFV 460

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
            W +MI+GY Q+   +EA+ LF +M  +AG+ PN  T  S++ AC  +    + E     
Sbjct: 461 TWTSMISGYSQHGQPQEAIQLFEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 412 AIK---LGLGRDRYVQNALMDMYSRMGRIE-----ISKTIFDDMEVRDTVSWNTMITGYT 463
             K   +    D Y    ++DM+ R+GR+E     I +T F+  E      W++++ G  
Sbjct: 520 MKKEYCIEPVVDHY--GCMIDMFVRLGRVEDAFSFIKRTGFEPNE----AIWSSLVAG-- 571

Query: 464 ICGQHGD 470
            C  HG+
Sbjct: 572 -CRSHGN 577



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 255/511 (49%), Gaps = 47/511 (9%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L   + +H H+ K G   + + VA +LVN Y +C S   D  ++FD + E++ V+W +++
Sbjct: 94  LGAARAVHGHMAKTGAS-ADMFVATSLVNAYMRC-SAARDARRLFDGMPERNVVTWTALV 151

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
                  +  L LE F  ML     PS +TL +   AC  L+  D + LG+QVHG +++ 
Sbjct: 152 TGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC--LASCD-VDLGKQVHGYAIKY 208

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E  T + N+L ++YAKLG +D A   F    ++++++W T++S+ +++++ +E  M L
Sbjct: 209 GAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSL 268

Query: 272 R-QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M + G+ P+  ++ SV+  C     L+ GK++ A++ +      N  V ++ + +Y 
Sbjct: 269 FIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET-NLPVKNSTMYLYL 327

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQ---NEYDE--------EALMLFIKMEEV 379
              E +   R+F+ + D  I  WNAMI+GY Q   +  D+        +AL +F  ++  
Sbjct: 328 RKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRS 387

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
             + P+  T SS++  C    A    E IH   IK G   D  V +AL++MY++ G I+ 
Sbjct: 388 V-MKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +   F +M  R  V+W +MI+GY+  GQ  +A+ L  EM+                 +  
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR-----------------LAG 489

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCG---- 553
            +PN IT +++L  C + + L +  E +   ++     + VV     ++DM+ + G    
Sbjct: 490 VRPNEITFVSLLSAC-SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED 548

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
             +F +R     P  N   W+ ++     HG
Sbjct: 549 AFSFIKRT-GFEP--NEAIWSSLVAGCRSHG 576



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 23/226 (10%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           CV + +      +HGH  K G   D +V  +L++ Y R      ++ +FD M  R+ V+W
Sbjct: 88  CVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTW 147

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
             ++TGYT+  Q    L +  EM  M                    P+  TL   L  C 
Sbjct: 148 TALVTGYTLNSQPALGLEVFVEMLEMGR-----------------YPSHYTLGATLNACL 190

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           A   +  GK++H YAI+    +   +G++L  +YAK G L+ A R F  +P +NVITW  
Sbjct: 191 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 250

Query: 576 IIMAYGMHGEGQEV-LELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +I A     E  E+ + L  +M+ +G     V PNE T  ++ + C
Sbjct: 251 MISACAEDEECVELGMSLFIDMLMDG-----VMPNEFTLTSVMSLC 291



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 15/238 (6%)

Query: 52  EARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           +ARS  F +A+  + ++ RS ++PD F F ++L   + +  L  G+QIHA  +K G+ LS
Sbjct: 369 QARSRGF-QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF-LS 426

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V V + LVNMY KCG  + D  K F  +  +  V+W SMI+   + G+   A++ F  M
Sbjct: 427 DVVVNSALVNMYNKCGC-IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN---ALMAMYA 228
             + V P+  T VS+  ACS      GL    + + + ++       +++    ++ M+ 
Sbjct: 486 RLAGVRPNEITFVSLLSACS----YAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFV 541

Query: 229 KLGRVDDAKTLFK--SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
           +LGRV+DA +  K   FE  + + W+++V+    +      + F     L  +KP G+
Sbjct: 542 RLGRVEDAFSFIKRTGFEPNEAI-WSSLVAGCRSHGNM--ELAFYAADKLLELKPKGI 596



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 11/198 (5%)

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
            S   + +L  C    +L   + +H +  +   + D+ V ++LV+ Y +C     ARR+F
Sbjct: 77  QSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLF 136

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           D MP RNV+TW  ++  Y ++ +    LE+   M+  G       P+  T  A   AC  
Sbjct: 137 DGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY-----PSHYTLGATLNACLA 191

Query: 623 SGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           S  V  G  +  Y +K  YG E        +  L  + G ++ A +    +P +      
Sbjct: 192 SCDVDLGKQVHGYAIK--YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK--NVIT 247

Query: 682 WSSLLGACRIHQN-VEIG 698
           W++++ AC   +  VE+G
Sbjct: 248 WTTMISACAEDEECVELG 265


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/680 (36%), Positives = 388/680 (57%), Gaps = 45/680 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L++ YAK   V+ A  LF      D VS+NT++++ ++      A     +M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRNDILIDNSFV--GSALVDMYCN 331
              +  DG +++ ++ AC     ++ G  +++HA ++   +   +S+V  G+AL+  Y  
Sbjct: 133 EAFLDMDGFTLSGIITACG----INVGLIRQLHALSVVTGL---DSYVSVGNALITSYSK 185

Query: 332 CREVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              ++  RR+F ++S D+    WN+M+  Y Q+    +AL L+++M  V GL  +  T++
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMT-VRGLIVDIFTLA 244

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS-KTIFDDMEV 449
           SV+ A    +        H   IK G  ++ +V + L+D+YS+ G   +  + +FD++  
Sbjct: 245 SVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304

Query: 450 RDTVSWNTMITGYTICGQHGD-ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            D V WNTMI+GY++     D AL   R++Q                 V+  +P+  +L+
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQ-----------------VVGHRPDDCSLV 347

Query: 509 TVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            V+  C  +S+ ++G+++H  A++ ++ +  + V +AL+ MY+KCG L  A+ +FD MP 
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE 407

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            N +++N +I  Y  HG G + L L + M+  G       P  +TFI++ AAC+H+G V 
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMG-----FTPTNITFISVLAACAHTGRVE 462

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-WSSLL 686
           +G   F  MK  +GIEP   H++C++DLLGRAGK+ +A +LI  +P  FD     WS+LL
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIP--FDPGFFFWSALL 520

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
           GACRIH NVE+   AA  L  L+P  A+ YV+L+NIYS       A  VRK M++ GV+K
Sbjct: 521 GACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKK 580

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL----HNV 802
           +PGCSWIE    IH F+A D  H   +++  +LE +  +++K GY P+    L      V
Sbjct: 581 KPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRV 640

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            + E+E  L  HSEKLA++FG+++T  G  I V KNLR+C DCH A K+IS++  REI +
Sbjct: 641 WQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITV 700

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFH FK+G CSCG YW
Sbjct: 701 RDSHRFHCFKDGQCSCGGYW 720



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 294/609 (48%), Gaps = 79/609 (12%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC-----GSDMWD-- 132
           F   LK     +DL  GK +HA  +K  +  +S  ++N  + +Y KC        ++D  
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIK-SFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 133 -----------------------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                                   +++FD + + D VS+N++IA   R G    A + F 
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG--RQVHGNSLRVG-EWNTFIMNALMAM 226
            M  + ++   FTL  +  AC       G+ +G  RQ+H  S+  G +    + NAL+  
Sbjct: 130 EMREAFLDMDGFTLSGIITAC-------GINVGLIRQLHALSVVTGLDSYVSVGNALITS 182

Query: 227 YAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           Y+K G + +A+ +F    EDRD VSWN++V +  Q+ +  +A+    +M +RG+  D  +
Sbjct: 183 YSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFT 242

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFD 343
           +ASVL A ++++ L  G + HA  +++     NS VGS L+D+Y  C    ++C R+VFD
Sbjct: 243 LASVLTAFTNVQDLLGGLQFHAKLIKSGYH-QNSHVGSGLIDLYSKCGGCMLDC-RKVFD 300

Query: 344 FISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            IS+  + LWN MI+GY   E   +EAL  F ++ +V G  P+  ++  V+ AC    + 
Sbjct: 301 EISNPDLVLWNTMISGYSLYEDLSDEALECFRQL-QVVGHRPDDCSLVCVISACSNMSSP 359

Query: 403 PDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                +HG A+KL +  +R  V NAL+ MYS+ G +  +KT+FD M   +TVS+N+MI G
Sbjct: 360 SQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAG 419

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y    QHG     L   Q M E              +   P +IT ++VL  C     + 
Sbjct: 420 Y---AQHGMGFQSLHLFQRMLE--------------MGFTPTNITFISVLAACAHTGRVE 462

Query: 522 KGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
            GK I+   ++     +   G  S ++D+  + G L+ A R+ + +P       W+ ++ 
Sbjct: 463 DGK-IYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLG 521

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           A  +HG     +EL    +   +R  ++ P N   ++ L    S +G + +   +  K+ 
Sbjct: 522 ACRIHGN----VEL---AIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASV-RKLM 573

Query: 638 DDYGIEPSP 646
            D G++  P
Sbjct: 574 RDRGVKKKP 582



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 148/270 (54%), Gaps = 7/270 (2%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S+ R + SW   + +  +  +  +A+  Y+EMT   +  D F   +VL A   +QDL  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            Q HA ++K GY  +S  V + L+++Y KCG  M D  KVFD I+  D V WN+MI+   
Sbjct: 260 LQFHAKLIKSGYHQNS-HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318

Query: 157 RFGKW-DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VG 213
            +    D ALE FR +      P   +LV V  ACSN+S       GRQVHG +L+  + 
Sbjct: 319 LYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQ---GRQVHGLALKLDIP 375

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
                + NAL+AMY+K G + DAKTLF +  + + VS+N++++  +Q+    +++   ++
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           M   G  P  ++  SVL AC+H   ++ GK
Sbjct: 436 MLEMGFTPTNITFISVLAACAHTGRVEDGK 465



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 191/421 (45%), Gaps = 66/421 (15%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L  C     L TGK +HA  +++  +  ++++ +  + +Y  CR +   RRVFD   D  
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKS-FVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCN 73

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR----------- 398
           +  +N +I+ Y +  Y E A  LF +M +     P++ + ++++ A  R           
Sbjct: 74  VFSFNTLISAYAKESYVEVAHQLFDEMPQ-----PDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 399 ---SEAFPDKEGI-----------------HGHAIKLGLGRDRYVQ--NALMDMYSRMGR 436
               EAF D +G                    HA+ +  G D YV   NAL+  YS+ G 
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188

Query: 437 IEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
           ++ ++ IF  + E RD VSWN+M+  Y    +   AL L  EM        R  + D+  
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM------TVRGLIVDI-- 240

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GC 554
                     TL +VL     +  L  G + HA  I++    +  VGS L+D+Y+KC GC
Sbjct: 241 ---------FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGC 291

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           +   R+VFD +   +++ WN +I  Y ++ +   E LE  + +   G R     P++ + 
Sbjct: 292 MLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHR-----PDDCSL 346

Query: 614 IALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
           + + +ACS+    S+G  +    +K D        + A ++ +  + G + DA  L + M
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNA-LIAMYSKCGNLRDAKTLFDTM 405

Query: 673 P 673
           P
Sbjct: 406 P 406



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  + ++     +PD+ +   V+ A + +   S G+Q+H   +K     + ++V N L
Sbjct: 326 EALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNAL 385

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           + MY KCG ++ D   +FD + E + VS+NSMIA   + G    +L  F+ ML     P+
Sbjct: 386 IAMYSKCG-NLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPT 444

Query: 180 SFTLVSVALACSNLSR-RDG---LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
           + T +SV  AC++  R  DG     + +Q  G     G ++  I      +  + G++ +
Sbjct: 445 NITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI-----DLLGRAGKLSE 499

Query: 236 AKTLFKSFE-DRDLVSWNTIVSS 257
           A+ L ++   D     W+ ++ +
Sbjct: 500 AERLIETIPFDPGFFFWSALLGA 522


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/702 (34%), Positives = 390/702 (55%), Gaps = 36/702 (5%)

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           V V  +C+ L     L  GR++H    RVG   + ++ N L+ MY K G +++A+ +F++
Sbjct: 38  VRVIQSCARLG---ALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEA 94

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH-LEMLDT 301
              +++ SW  +++  +Q+ +  EA+    +M  +GI+P  VS  + + ACS   E L  
Sbjct: 95  TPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPA 154

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G+ +HA  LR     D     ++LV MY  C  +E   + F+ +++     WNAMI  + 
Sbjct: 155 GRALHAL-LRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFA 213

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           ++    EAL    KM  + G+   + T  +++ A  +         IH   ++ G  +D 
Sbjct: 214 EHRRGLEALRTLQKMF-LEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD- 271

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V N +++MY + G ++ ++ +F  M   D ++WNTMI  Y+   QHG     LR  + M
Sbjct: 272 -VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYS---QHGHTSEALRFYELM 327

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA-YAIRNMLATDVV 540
           +EE                 P+  T ++V+  C  L  +  GK++H     R    T++ 
Sbjct: 328 QEEG--------------VVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTEL- 372

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
             ++LV+MY KCG L+ AR +FD    +  +TWN +I AY  H   Q+  EL   M  +G
Sbjct: 373 -ANSLVNMYGKCGILDVARSIFD-KTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDG 430

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                 +P+ +TF+++ +AC+++G+  E    F  M+ D+G+ P   HY C+V+ LG+AG
Sbjct: 431 E-----EPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAG 485

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           ++ DA  LI  MP E D    W+S L  CR H +++ G+ AA+    ++P+ ++ YV L+
Sbjct: 486 RLSDAEALIQGMPFEPDVL-TWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALA 544

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            I++ A  + +A  +RK M + G+RK  G S I+ G  +++F AGD S+ +S+++   L+
Sbjct: 545 RIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELK 604

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L + M++ GY PD + V H+V   +KE LL  HSE+LAIAFGI++T  GT +R+ KNLR
Sbjct: 605 RLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLR 664

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           VC DCH  TK  SKI  REII+RD  RFHHFKNG+CSC D+W
Sbjct: 665 VCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 226/439 (51%), Gaps = 34/439 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV-AGIQDLSLGKQIHAH 102
           SW   +   A+  + +EA+  + EM +  IQP + +F A + A  AG + L  G+ +HA 
Sbjct: 102 SWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHAL 161

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + +YG+   +V    +LV+MY KCGS + +  K F+ +TE + VSWN+MIA      +  
Sbjct: 162 LRRYGFQ-DAVVATTSLVSMYSKCGS-LEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            AL   + M    +   S T +++  A    S+   L+  R +H   LR G ++  ++N 
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQ---LKSARYIHDCILRTG-FDQDVVNV 275

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MY K G + DA+ +FKS    D+++WNT++++ SQ+    EA+ F   M   G+ PD
Sbjct: 276 ILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPD 335

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF----VGSALVDMYCNCREVECG 338
             +  SV+ AC+ L  ++ GK++H        L D +F    + ++LV+MY  C  ++  
Sbjct: 336 DYTYVSVIDACATLGDMEVGKQVHRR------LGDRAFQVTELANSLVNMYGKCGILDVA 389

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD  +   +  WNAMI  Y Q+ ++++A  LF+ M  + G  P+  T  SV+ AC  
Sbjct: 390 RSIFDKTAKGSVT-WNAMIGAYAQHSHEQQAFELFLLM-RLDGEEPSYITFMSVLSACAN 447

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-D 451
           +   P++     H+  + + +D  V+        +++   + GR+  ++ +   M    D
Sbjct: 448 A-GLPEE----AHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPD 502

Query: 452 TVSWNTMITGYTICGQHGD 470
            ++W + +     C  HGD
Sbjct: 503 VLTWTSFLAN---CRSHGD 518



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 248/514 (48%), Gaps = 46/514 (8%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           V+++ A +  L+ G++IH  + + G G S V V+N LV MYGKCGS + +   VF+    
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLG-SDVYVSNHLVMMYGKCGS-LEEARLVFEATPA 97

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           K+  SW  +I    + G+   AL  F  ML   ++P S +  +   ACS  +  + L  G
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACS--AGPEFLPAG 155

Query: 203 RQVHGNSLRVGEWNTFI-MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
           R +H    R G  +  +   +L++MY+K G ++++   F+S  + + VSWN ++++ +++
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEH 215

Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
            + LEA+  L++M L GI+   V+  +++ A      L + + IH   LR     D   V
Sbjct: 216 RRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD---V 272

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
            + +++MY  C  ++    +F  +S   +  WN MI  Y Q+ +  EAL  +  M+E  G
Sbjct: 273 VNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQE-EG 331

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ-----NALMDMYSRMGR 436
           + P+  T  SV+ AC       D E   G  +   LG DR  Q     N+L++MY + G 
Sbjct: 332 VVPDDYTYVSVIDACA---TLGDMEV--GKQVHRRLG-DRAFQVTELANSLVNMYGKCGI 385

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           ++++++IFD    + +V+WN MI  Y        A  L   M+   EE            
Sbjct: 386 LDVARSIFDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEE------------ 432

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA----LVDMYAKC 552
                P+ IT M+VL  C A + L   +E H+Y +       V  G      +V+   K 
Sbjct: 433 -----PSYITFMSVLSAC-ANAGLP--EEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKA 484

Query: 553 GCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           G L+ A  +   MP   +V+TW   +     HG+
Sbjct: 485 GRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGD 518


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/632 (37%), Positives = 349/632 (55%), Gaps = 77/632 (12%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYC--NCREVECGRRVFDFISDKKIALWNAMITGY 360
           K++HA  ++   + D   + +A V  +C  + R+++  R VF  + +     WN ++   
Sbjct: 36  KQLHAIFIKTGQIQDP--LTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVL 93

Query: 361 GQN---EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            +        EALMLF  M     + PN  T  SV+ AC R+    + + IHG  +K G 
Sbjct: 94  AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153

Query: 418 GRDRYVQNALMDMY---------------------------------------------- 431
             D +V + L+ MY                                              
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213

Query: 432 -SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
             R+G I+ +K +FD+M  R  VSWN MI+GY   G   +A+ L +EMQ+       +N+
Sbjct: 214 QVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQS-------SNI 266

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                      PN +TL++VLP    + AL  GK IH YA +N +  D V+GSALVDMY+
Sbjct: 267 ----------DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYS 316

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG ++ A +VF+ +P RN ITW+ II A+ MHG  ++ +     M   G     V PN+
Sbjct: 317 KCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG-----VTPND 371

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           V +I + +ACSH+G+V EG   F  M    G++P  +HY C+VDLLGRAG +E+A +LI 
Sbjct: 372 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIR 431

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP E D    W +LLGAC++H+N+++GE  A+ L  L P  +  YV LSN+Y+S   W+
Sbjct: 432 NMPIEPDDV-IWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWE 490

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
               VR KMK M +RK+PGCSWIE    IH+FL  D SH +++++   L  +S ++R  G
Sbjct: 491 AVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNG 550

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y P+T  V  N +E+E+   L  HSEK+A+AFG+++T P   +++ KNLR+C DCH + K
Sbjct: 551 YRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLK 610

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IS I  R+II+RD +RFH F++G+CSC DYW
Sbjct: 611 LISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 200/443 (45%), Gaps = 67/443 (15%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HA  +K G     +T A  ++        D+     VF ++ E +   WN+++  L 
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAE-VIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLA 94

Query: 157 RFGKWDLALEAFRMMLYS------NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
                 L  EA  +ML+S       V+P+ FT  SV  AC+  SR   LR G+Q+HG  +
Sbjct: 95  ETNDEHLQSEA--LMLFSAMLCDGRVKPNRFTFPSVLKACARASR---LREGKQIHGLIV 149

Query: 211 RVG-EWNTFIMNALMAMYA----------------------------------------- 228
           + G   + F+++ L+ MY                                          
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNI 209

Query: 229 ------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
                 +LG +  AK LF     R +VSWN ++S  +QN  F+EA+   ++M    I P+
Sbjct: 210 MIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPN 269

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++ SVLPA + +  L+ GK IH YA +N I ID+  +GSALVDMY  C  ++   +VF
Sbjct: 270 YVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDD-VLGSALVDMYSKCGSIDEALQVF 328

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  +    W+A+I  +  +   E+A++ F  M + AG+ PN      ++ AC  +   
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK-AGVTPNDVAYIGILSACSHAGLV 387

Query: 403 PDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
            +      H +K +GL         ++D+  R G +E ++ +  +M +  D V W  ++ 
Sbjct: 388 EEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLG 447

Query: 461 GYTICGQHGDALMLLREMQNMEE 483
               C  H +  M  R  + + E
Sbjct: 448 A---CKMHKNLKMGERVAETLME 467



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 61/321 (19%)

Query: 45  WIESLRSEARSNQFR---EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           W   LR  A +N      EA++ +  M     ++P+ F FP+VLKA A    L  GKQIH
Sbjct: 86  WNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIH 145

Query: 101 AHVVKYGYGLSSVTVANTLVNMY---------------------GKCGSD---------- 129
             +VK+G+      ++N LV MY                     G C  +          
Sbjct: 146 GLIVKFGFHEDEFVISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNV 204

Query: 130 -MWDVY--------------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
            +W++                +FD + ++  VSWN MI+   + G +  A+  F+ M  S
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG----EWNTFIMNALMAMYAKL 230
           N++P+  TLVSV  A   ++R   L LG+ +H   L  G    E +  + +AL+ MY+K 
Sbjct: 265 NIDPNYVTLVSVLPA---IARIGALELGKWIH---LYAGKNKIEIDDVLGSALVDMYSKC 318

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +D+A  +F++   R+ ++W+ I+ + + + +  +A++    M   G+ P+ V+   +L
Sbjct: 319 GSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGIL 378

Query: 291 PACSHLEMLDTGKEIHAYALR 311
            ACSH  +++ G+   ++ ++
Sbjct: 379 SACSHAGLVEEGRSFFSHMVK 399



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 10/230 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F EAI  + EM  S+I P+     +VL A+A I  L LGK IH + 
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    +  V + + LV+MY KCGS + +  +VF+ + +++ ++W+++I      G+ + 
Sbjct: 297 GKNKIEIDDV-LGSALVDMYSKCGS-IDEALQVFETLPKRNAITWSAIIGAFAMHGRAED 354

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI--MN 221
           A+  F +M  + V P+    + +  ACS+      +  GR    + ++V      I    
Sbjct: 355 AIIHFHLMGKAGVTPNDVAYIGILSACSHAGL---VEEGRSFFSHMVKVVGLQPRIEHYG 411

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS--LSQNDKFLEAV 268
            ++ +  + G +++A+ L ++   + D V W  ++ +  + +N K  E V
Sbjct: 412 CMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461


>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
 gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/457 (44%), Positives = 290/457 (63%), Gaps = 23/457 (5%)

Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
           A++  Y++ G I+ ++ +FD +E RD + WN MI GY   G   + L+L R+M N     
Sbjct: 11  AMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNA---- 66

Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
                        + +PN +T++ VL  CG   AL  G+ +H+Y   N +  +V VG++L
Sbjct: 67  -------------KVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSL 113

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           +DMY+KCG L  AR VF+ +  ++V+ WN +++ Y MHG  Q+ L L K M   G     
Sbjct: 114 IDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIG----- 168

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
            +P ++TFI +  ACSH+G+VSEG   FY MKD+YGIEP  +HY C+V+LLGRAG +E+A
Sbjct: 169 YQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEA 228

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
           Y+L+  M  + D    W +LLGACR+H N+ +GE  A+ L       +  YVLLSNIY++
Sbjct: 229 YELVKNMEIDQDPV-LWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAA 287

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
           A  W+    VR  MKE G  KEPGCS IE  +++H+FLAGD  H +S +++  LE ++  
Sbjct: 288 AGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGW 347

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           ++  GY P T  VLH++ + +KE  L  HSEKLA+AFG++ T PGTTI++ KNLRVC DC
Sbjct: 348 LKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADC 407

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H  TK ISKI  R++++RD  RFHHF NG CSCGDYW
Sbjct: 408 HAVTKLISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 444



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 142/255 (55%), Gaps = 11/255 (4%)

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
           + A++  YAK G +D+A+ LF   E+RD + WN ++   +Q+    E ++  RQM    +
Sbjct: 9   LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +P+ V++ +VL AC     L+TG+ +H+Y   N I I N  VG++L+DMY  C  +E  R
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGI-NVRVGTSLIDMYSKCGSLEDAR 127

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VF+ IS+K +  WN+M+ GY  + + ++AL LF +M  + G  P   T   V+ AC  S
Sbjct: 128 LVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMI-GYQPTDITFIGVLNAC--S 184

Query: 400 EAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEV-RDTVSW 455
            A    EG    +++K   G +  V++   ++++  R G +E +  +  +ME+ +D V W
Sbjct: 185 HAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLW 244

Query: 456 NTMITGYTICGQHGD 470
            T++     C  HG+
Sbjct: 245 GTLLGA---CRLHGN 256



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 142/287 (49%), Gaps = 27/287 (9%)

Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
           +A++  Y     ++  R +FD + ++    WN MI GY Q+    E L+LF +M   A +
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLN-AKV 68

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN  T+ +V+ AC ++ A      +H +    G+G +  V  +L+DMYS+ G +E ++ 
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F+ +  +D V+WN+M+ GY + G   DAL L +EM                  ++  +P
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEM-----------------CMIGYQP 171

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARR 560
             IT + VL  C     +++G +   Y++++    +  V     +V++  + G L  A  
Sbjct: 172 TDITFIGVLNACSHAGLVSEGWKFF-YSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYE 230

Query: 561 VFDLMPV-RNVITWNVIIMAYGMHGE---GQEVLELL--KNMVAEGS 601
           +   M + ++ + W  ++ A  +HG    G+++ E L  +N+   G+
Sbjct: 231 LVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGT 277



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 22/215 (10%)

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           S+     ++  Y K G  M D  +V FD + E+D + WN MI    + G  +  L  FR 
Sbjct: 5   SLVSLTAMITCYAKYG--MIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH--------GNSLRVGEWNTFIMNA 222
           ML + V P+  T+++V  AC    +   L  GR VH        G ++RVG        +
Sbjct: 63  MLNAKVRPNEVTVLAVLSACG---QTGALETGRWVHSYIENNGIGINVRVG-------TS 112

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MY+K G ++DA+ +F+   ++D+V+WN++V   + +    +A+   ++M + G +P 
Sbjct: 113 LIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPT 172

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            ++   VL ACSH  ++  G +   Y+++++  I+
Sbjct: 173 DITFIGVLNACSHAGLVSEGWKFF-YSMKDEYGIE 206



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R    W   +   A+     E +L + +M  + ++P+     AVL A      L  
Sbjct: 31  GLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALET 90

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +H+++   G G+ +V V  +L++MY KCGS + D   VF+RI+ KD V+WNSM+   
Sbjct: 91  GRWVHSYIENNGIGI-NVRVGTSLIDMYSKCGS-LEDARLVFERISNKDVVAWNSMVVGY 148

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLG---RQVHGNSLR 211
              G    AL  F+ M     +P+  T + V  ACS+     +G +     +  +G   +
Sbjct: 149 AMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPK 208

Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           V  +       ++ +  + G +++A  L K+ E D+D V W T++ +
Sbjct: 209 VEHY-----GCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGA 250



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 8/150 (5%)

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +A++  YAK G ++ AR +FD +  R+ I WNV+I  Y  HG   E L L + M+     
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQML----- 64

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
             +V+PNEVT +A+ +AC  +G +  G  +   ++++ GI  +      ++D+  + G +
Sbjct: 65  NAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENN-GIGINVRVGTSLIDMYSKCGSL 123

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           EDA  +   +  +     AW+S++    +H
Sbjct: 124 EDARLVFERISNK--DVVAWNSMVVGYAMH 151


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/596 (37%), Positives = 350/596 (58%), Gaps = 27/596 (4%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C+  + L  GK +H+  L  D    +  + + L++MY  C  +   R VFD I +K
Sbjct: 30  LLKKCADSKALLEGKRVHS-CLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEK 88

Query: 349 K--IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
              +  WN +I  Y QN   +EAL LF  M+ + G+  N  T+ + + AC    +  +  
Sbjct: 89  NADVISWNGIIGAYTQNGLGKEALHLFKTMD-LEGVIANQVTLINAIDACASLPSEEEGR 147

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H  A+   L  D  V  +L++M+ +   ++ ++ +FD +  ++ V+WN M+  Y+   
Sbjct: 148 IVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNW 207

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q   A+ + R M             DL+      +P+++T +T++  C AL+A  +G+ +
Sbjct: 208 QCKKAIQVFRFM-------------DLEGV----QPDAVTFLTIIDACAALAAHTEGRMV 250

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H     + +  DV +G+A++  Y KCG L+ AR +FD +  +N +TW+ I+ AY  +G  
Sbjct: 251 HDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYE 310

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            E +EL   MV  G     ++ N +TF+ L  ACSH+G   +G+D F  M  D+G+ P  
Sbjct: 311 TEAIELYHEMVQGG-----LEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVF 365

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY  ++DLLGR+G+++ +  LIN MP E D + AW +LLGACR+H +V+ G   A+ ++
Sbjct: 366 EHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSS-AWLALLGACRMHGDVDRGARIAELIY 424

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            L+P+ +  Y+LLSN+YSS    D+A   RK M+  G+ K+PG S IE  D +H+F+A  
Sbjct: 425 ELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQ 484

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
             H Q  ++H  +E L  R+++ GYV D   VL +V EEEKE LL  HSE+LAIAFG+++
Sbjct: 485 KLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLIS 544

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           TPPGT + + KNLRVC DCH A K ISK+  R+I++RD  RFHHF+NG CSCGDYW
Sbjct: 545 TPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 208/401 (51%), Gaps = 25/401 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  +LK  A  + L  GK++H+ +VK GY  S   +AN L+ MYGKCG  + +   VFD+
Sbjct: 27  YVLLLKKCADSKALLEGKRVHSCLVKDGYA-SDRLIANLLIEMYGKCGG-IAEARSVFDQ 84

Query: 140 ITEK--DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
           I EK  D +SWN +I    + G    AL  F+ M    V  +  TL++   AC++L   +
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 198 GLRLGRQVHGNSL-RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
               GR VH  ++ +  E +T +  +L+ M+ K   VD A+ +F S   ++LV+WN +V+
Sbjct: 145 E---GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVA 201

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
             SQN +  +A+   R M L G++PD V+  +++ AC+ L     G+ +H     + I +
Sbjct: 202 VYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPM 261

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           D +  G+A++  Y  C  ++  R +FD +  K    W+A++  Y QN Y+ EA+ L+ +M
Sbjct: 262 DVAL-GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA------LMDM 430
            +  GL  N  T   ++ AC  S A    +G+      + + RD  V         L+D+
Sbjct: 321 VQ-GGLEVNGITFLGLLFAC--SHAGRSMDGVD---YFVSMIRDFGVVPVFEHYLNLIDL 374

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
             R G++++S+ + + M    D+ +W  ++     C  HGD
Sbjct: 375 LGRSGQLQLSEDLINSMPYEPDSSAWLALLGA---CRMHGD 412



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 33/307 (10%)

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
           +T   ++  C  S+A  + + +H   +K G   DR + N L++MY + G I  ++++FD 
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 447 MEVR--DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           ++ +  D +SWN +I  YT  G   +AL L + M             DL+  +     N 
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTM-------------DLEGVI----ANQ 127

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           +TL+  +  C +L +  +G+ +HA A+   L +D +VG++LV+M+ KC  ++ AR VFD 
Sbjct: 128 VTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDS 187

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +P +N++TWN ++  Y  + + ++ +++ + M  EG     V+P+ VTF+ +  AC+   
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEG-----VQPDAVTFLTIIDACAALA 242

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYA---CVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
             +EG      + DD      P   A    V+   G+ G++++A  + + +  +      
Sbjct: 243 AHTEGR----MVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKK--NTVT 296

Query: 682 WSSLLGA 688
           WS++L A
Sbjct: 297 WSAILAA 303



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%)

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
           + TV   +    T + +L  C    AL +GK +H+  +++  A+D ++ + L++MY KCG
Sbjct: 14  NRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCG 73

Query: 554 CLNFARRVFDLMPVRN--VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
            +  AR VFD +  +N  VI+WN II AY  +G G+E L L K M  EG     V  N+V
Sbjct: 74  GIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEG-----VIANQV 128

Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
           T I    AC+      EG  + + +  D  +E        +V++ G+   V+ A  + + 
Sbjct: 129 TLINAIDACASLPSEEEGR-IVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDS 187

Query: 672 MP 673
           +P
Sbjct: 188 LP 189



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 77/152 (50%), Gaps = 2/152 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   +++ Q ++AI  +  M    +QPD   F  ++ A A +   + G+ +H  +
Sbjct: 195 TWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDI 254

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
              G  +  V +   +++ YGKCG  + +   +FD + +K+ V+W++++A   + G    
Sbjct: 255 TASGIPM-DVALGTAVMHFYGKCGR-LDNARAIFDSLGKKNTVTWSAILAAYAQNGYETE 312

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           A+E +  M+   +E +  T + +  ACS+  R
Sbjct: 313 AIELYHEMVQGGLEVNGITFLGLLFACSHAGR 344


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/789 (33%), Positives = 404/789 (51%), Gaps = 96/789 (12%)

Query: 106 YGYGLS---------SVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSWNSMIAT 154
           YGY  +         S+    + ++ YG+ G D+ +  KVFD   + ++   SWN+M++ 
Sbjct: 3   YGYAATLRCRMVQARSLCSNTSAISRYGRIG-DIHNARKVFDNTPLPQRTIASWNAMVSA 61

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
                             + + +P                 RD L L  Q+        +
Sbjct: 62  Y-----------------FESHKP-----------------RDALLLFDQMP-------Q 80

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            NT   N +++ Y K G V DA+ +F    +R++VSW ++V    Q     EA     +M
Sbjct: 81  RNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM 140

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             R +    V I  +L        +D  K++       D+++  + +G      YC    
Sbjct: 141 PRRNVVSWTVMIGGLLKESR----IDDAKKLFDMIPEKDVVVVTNMIGG-----YCQVGR 191

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++  R +FD +  + +  W  M++GY +N   + A  LF  M E   +   A  M     
Sbjct: 192 LDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQS 251

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
             ++ EAF   E +    I           N ++  +   G +  ++ +F+ M+ RD  +
Sbjct: 252 GRMK-EAFELFEAMPVKWI--------VACNEMILQFGLAGEMHRARMMFEGMKERDEGT 302

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN MI  +   G   +AL L   MQ               E V    P+ I++++V   C
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQR--------------EGVALNFPSMISVLSV---C 345

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            +L++L  G+++HA  +R+    D+ V S L+ MY KCG L  A+ +F+    ++V+ WN
Sbjct: 346 ASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWN 405

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I  Y  HG G+E L +  +M + G     V+P+EVTFI + +ACS+SG V EG ++F 
Sbjct: 406 SMITGYSQHGLGEEALNVFHDMCSSG-----VQPDEVTFIGVLSACSYSGKVKEGFEIFE 460

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
            MK  Y +EP  +HYAC+VDLLGRAG+V++A +L+  MP E D A  W +LLGACR H  
Sbjct: 461 AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPD-AIVWGALLGACRNHMK 519

Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
           +++ E+A + L  LEP  A  YVLLS++Y++   W     +RKK+    V K PGCSWIE
Sbjct: 520 LDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIE 578

Query: 755 FGDEIHKFLAGDG-SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
              ++H F  GD  SH +   +   LE LS  +R+ GY PD S VLH+V+EEEK   L  
Sbjct: 579 VEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGY 638

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSE+LA+A+G+L  P G  IRV KNLRVC DCH A K I+K+  REIILRD  RFHHFK+
Sbjct: 639 HSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKD 698

Query: 874 GTCSCGDYW 882
           G+CSC D+W
Sbjct: 699 GSCSCKDFW 707



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 8/243 (3%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G + R + +W   ++   R     EA+  +  M R  +  +  +  +VL   A +  L  
Sbjct: 294 GMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDH 353

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+HA +V+  +    + VA+ L+ MY KCG D+     +F+R   KD V WNSMI   
Sbjct: 354 GRQVHARLVRSEFD-QDLYVASVLITMYVKCG-DLVRAKGIFNRFLFKDVVMWNSMITGY 411

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGN-SLRVG 213
            + G  + AL  F  M  S V+P   T + V  ACS   + ++G  +   +     +  G
Sbjct: 412 SQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPG 471

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
             +   M  L+    + GRVD+A  L +    + D + W  ++ +   + K   A + + 
Sbjct: 472 IEHYACMVDLL---GRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528

Query: 273 QMA 275
           ++A
Sbjct: 529 KLA 531


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/632 (37%), Positives = 349/632 (55%), Gaps = 77/632 (12%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYC--NCREVECGRRVFDFISDKKIALWNAMITGY 360
           K++HA  ++   + D   + +A V  +C  + R+++  R VF  + +     WN ++   
Sbjct: 36  KQLHAIFIKTGQIQDP--LTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRIL 93

Query: 361 GQN---EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            +        EALMLF  M     + PN  T  SV+ AC R+    + + IHG  +K G 
Sbjct: 94  AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153

Query: 418 GRDRYVQNALMDMY---------------------------------------------- 431
             D +V + L+ MY                                              
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213

Query: 432 -SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
             R+G I+ +K +FD+M  R  VSWN MI+GY   G   +A+ L +EMQ+       +N+
Sbjct: 214 QVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQS-------SNI 266

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                      PN +TL++VLP    + AL  GK IH YA +N +  D V+GSALVDMY+
Sbjct: 267 ----------DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYS 316

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           KCG ++ A +VF+ +P RN ITW+ II A+ MHG  ++ +     M   G     V PN+
Sbjct: 317 KCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG-----VTPND 371

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           V +I + +ACSH+G+V EG   F  M    G++P  +HY C+VDLLGRAG +E+A +LI 
Sbjct: 372 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIR 431

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
            MP E D    W +LLGAC++H+N+++GE  A+ L  L P  +  YV LSN+Y+S   W+
Sbjct: 432 NMPIEPDDV-IWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWE 490

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
               VR KMK M +RK+PGCSWIE    IH+FL  D SH +++++   L  +S ++R  G
Sbjct: 491 AVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNG 550

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           Y P+T  V  N +E+E+   L  HSEK+A+AFG+++T P   +++ KNLR+C DCH + K
Sbjct: 551 YRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLK 610

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IS I  R+II+RD +RFH F++G+CSC DYW
Sbjct: 611 LISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 200/443 (45%), Gaps = 67/443 (15%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HA  +K G     +T A  ++        D+     VF ++ E +   WN+++  L 
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAE-VIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILA 94

Query: 157 RFGKWDLALEAFRMMLYS------NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
                 L  EA  +ML+S       V+P+ FT  SV  AC+  SR   LR G+Q+HG  +
Sbjct: 95  ETNDEHLQSEA--LMLFSAMLCDGRVKPNRFTFPSVLKACARASR---LREGKQIHGLIV 149

Query: 211 RVG-EWNTFIMNALMAMYA----------------------------------------- 228
           + G   + F+++ L+ MY                                          
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNI 209

Query: 229 ------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
                 +LG +  AK LF     R +VSWN ++S  +QN  F+EA+   ++M    I P+
Sbjct: 210 MIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPN 269

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            V++ SVLPA + +  L+ GK IH YA +N + ID+  +GSALVDMY  C  ++   +VF
Sbjct: 270 YVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDD-VLGSALVDMYSKCGSIDKALQVF 328

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + +  +    W+A+I  +  +   E+A++ F  M + AG+ PN      ++ AC  +   
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK-AGVTPNDVAYIGILSACSHAGLV 387

Query: 403 PDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
            +      H +K +GL         ++D+  R G +E ++ +  +M +  D V W  ++ 
Sbjct: 388 EEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLG 447

Query: 461 GYTICGQHGDALMLLREMQNMEE 483
               C  H +  M  R  + + E
Sbjct: 448 A---CKMHKNLKMGERVAETLME 467



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 61/321 (19%)

Query: 45  WIESLRSEARSNQFR---EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           W   LR  A +N      EA++ +  M     ++P+ F FP+VLKA A    L  GKQIH
Sbjct: 86  WNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIH 145

Query: 101 AHVVKYGYGLSSVTVANTLVNMY---------------------GKCGSD---------- 129
             +VK+G+      ++N LV MY                     G C  +          
Sbjct: 146 GLIVKFGFHEDEFVISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNV 204

Query: 130 -MWDVY--------------KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
            +W++                +FD +  +  VSWN MI+   + G +  A+  F+ M  S
Sbjct: 205 VLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSS 264

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG----EWNTFIMNALMAMYAKL 230
           N++P+  TLVSV  A   ++R   L LG+ +H   L  G    E +  + +AL+ MY+K 
Sbjct: 265 NIDPNYVTLVSVLPA---IARIGALELGKWIH---LYAGKNKVEIDDVLGSALVDMYSKC 318

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +D A  +F++   R+ ++W+ I+ + + + +  +A++    M   G+ P+ V+   +L
Sbjct: 319 GSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGIL 378

Query: 291 PACSHLEMLDTGKEIHAYALR 311
            ACSH  +++ G+   ++ ++
Sbjct: 379 SACSHAGLVEEGRSFFSHMVK 399



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F EAI  + EM  S+I P+     +VL A+A I  L LGK IH + 
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    +  V + + LV+MY KCGS +    +VF+ + +++ ++W+++I      G+ + 
Sbjct: 297 GKNKVEIDDV-LGSALVDMYSKCGS-IDKALQVFETLPKRNAITWSAIIGAFAMHGRAED 354

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI--MN 221
           A+  F +M  + V P+    + +  ACS+      +  GR    + ++V      I    
Sbjct: 355 AIIHFHLMGKAGVTPNDVAYIGILSACSHAGL---VEEGRSFFSHMVKVVGLQPRIEHYG 411

Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS--LSQNDKFLEAV 268
            ++ +  + G +++A+ L ++   + D V W  ++ +  + +N K  E V
Sbjct: 412 CMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 389/711 (54%), Gaps = 38/711 (5%)

Query: 93  LSLGKQIHAHVVKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           L   K +H  ++K  +    S+ + N + + Y KC SD+    ++FD++++++  SW  +
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC-SDIDAACRLFDQMSQRNTFSWTVL 142

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SL 210
           IA L   G +    E F  M    + P  F    +   C  L   D + LG  VH    +
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGL---DSIELGNMVHAQIVI 199

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-M 269
           R    +TF+  AL+ MYAKL  ++D+  +F +  + ++VSWN +++  + ND +L+A  +
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDM 328
           FLR M   G+ PD  +   V  A   L  ++  KE+  YAL  ++ +D N+ VG+AL+DM
Sbjct: 260 FLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYAL--ELGVDSNTLVGTALIDM 316

Query: 329 YCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
              C  ++  R +F+  FI+ +  A WNAMI+GY ++ ++E+AL LF KM +   ++ + 
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ-NDIYLDH 375

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFD 445
            T  SV  A    +     + +H  AIK GL  +   + NA+ + Y++ G +E  + +F+
Sbjct: 376 YTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFN 435

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            ME RD +SW +++T Y+ C +   A+ +     NM  E                 PN  
Sbjct: 436 RMEDRDLISWTSLVTAYSQCSEWDKAIEIF---SNMRAEG--------------IAPNQF 478

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  +VL  C  L  L  G+++H    +  L  D  + SALVDMYAKCGCL  A++VF+ +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
              + ++W  II  +  HG   + L+L + MV  G     V+PN VTF+ +  ACSH G+
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG-----VEPNAVTFLCVLFACSHGGL 593

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG+  F  MK  YG+ P  +HYAC+VDLL R G + DA + I+ MP E ++   W +L
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM-VWQTL 652

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACR+H NVE+GE+AAQ +   + + ++ YVLLSN Y  +  +   + +R  MKE GV+
Sbjct: 653 LGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVK 712

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           KEPGCSWI     +HKF AGD  H + ++++  LE L  ++     VPD S
Sbjct: 713 KEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLS 763



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 175/614 (28%), Positives = 300/614 (48%), Gaps = 47/614 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  F +    + EM    I PD FA+  +L+   G+  + LG  +HA +
Sbjct: 138 SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQI 197

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+  S   V+  L+NMY K   ++ D YKVF+ +TE + VSWN+MI     F   DL
Sbjct: 198 VIRGF-TSHTFVSTALLNMYAKL-QEIEDSYKVFNTMTEVNVVSWNAMITG---FTSNDL 252

Query: 164 ALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
            L+AF +   M+   V P + T + VA A   L  RD +   ++V G +L +G + NT +
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGML--RD-VNKAKEVSGYALELGVDSNTLV 309

Query: 220 MNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
             AL+ M +K G + +A+++F S     R    WN ++S   ++    +A+    +M   
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            I  D  +  SV  A + L+ L  GK++HA A+++ + ++   + +A+ + Y  C  +E 
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R+VF+ + D+ +  W +++T Y Q    ++A+ +F  M    G+ PN  T SSV+ +C 
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNM-RAEGIAPNQFTFSSVLVSCA 488

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                   + +HG   K+GL  D+ +++AL+DMY++ G +  +K +F+ +   DTVSW  
Sbjct: 489 NLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I G+   G   DAL L R M  +  E                 PN++T + VL  C   
Sbjct: 549 IIAGHAQHGIVDDALQLFRRMVQLGVE-----------------PNAVTFLCVLFACSHG 591

Query: 518 SALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
             + +G +      +   L  ++   + +VD+ ++ G LN A      MPV  N + W  
Sbjct: 592 GLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651

Query: 576 IIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           ++ A  +HG    G+   + + +  AE         N  T++ L      SG   +G+ L
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAE---------NSATYVLLSNTYIESGSYKDGLSL 702

Query: 633 FYKMKDDYGIEPSP 646
            + MK+  G++  P
Sbjct: 703 RHVMKEQ-GVKKEP 715



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 154/264 (58%), Gaps = 5/264 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R    W   +    RS    +A+  + +M ++DI  D++ + +V  A+A ++ LSLGK++
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA  +K G  ++ V+++N + N Y KCGS + DV KVF+R+ ++D +SW S++    +  
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGS-LEDVRKVFNRMEDRDLISWTSLVTAYSQCS 456

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           +WD A+E F  M    + P+ FT  SV ++C+NL     L  G+QVHG   +VG + +  
Sbjct: 457 EWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL---LEYGQQVHGIICKVGLDMDKC 513

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           I +AL+ MYAK G + DAK +F    + D VSW  I++  +Q+    +A+   R+M   G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 279 IKPDGVSIASVLPACSHLEMLDTG 302
           ++P+ V+   VL ACSH  +++ G
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEG 597


>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/542 (39%), Positives = 327/542 (60%), Gaps = 23/542 (4%)

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I D     +  MI GY      E AL  + +M E  G+ P+  T   ++ AC R +
Sbjct: 89  IFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMME-RGIEPDNFTYPCLLKACTRLK 147

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A  + + IHGH  KLGL  D +VQN+L++MY R G +E+S T+F+ +E +   SW++M +
Sbjct: 148 AIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFS 207

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G   + LML REM                ET L+ + +   +++ L  C    AL
Sbjct: 208 ACVGMGMWSECLMLFREM--------------CRETNLKAEESG--MVSALSACANTGAL 251

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G  IH + +RN+   +++V ++LVDMY KCGC++ A  +F  M  RN +T++ +I  +
Sbjct: 252 NLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGF 311

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            +HGEG+  L +   M+ EG     ++P+ V +++L  ACSHSG+V EG  +F +M  + 
Sbjct: 312 ALHGEGESALRMFSEMIKEG-----LEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEG 366

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            +EP+ +HY C+VDLLGRAG +E+A + I  +P E +    W S L  CR+HQN+E+G+I
Sbjct: 367 KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDV-VWRSFLSQCRVHQNIELGQI 425

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AAQ L  L       Y+L+SN+YS A +WD     R ++   G+++ PG S ++   + H
Sbjct: 426 AAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTH 485

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F++ D SH Q ++++  L  +  +++ EGY PD + +L NV+EEEK+  L GHS+K+AI
Sbjct: 486 RFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAI 545

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AF +L TPPG+ I++A+NLR+C+DCH  TK IS I  REI++RD  RFH FK GTCSC D
Sbjct: 546 AFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKD 605

Query: 881 YW 882
           YW
Sbjct: 606 YW 607



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 146/282 (51%), Gaps = 7/282 (2%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R       F  A+  Y EM    I+PDNF +P +LKA   ++ +  GKQIH HV K G 
Sbjct: 105 IRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLGL 164

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             + V V N+L+NMYG+CG +M     VF+++  K   SW+SM +     G W   L  F
Sbjct: 165 E-ADVFVQNSLINMYGRCG-EMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLF 222

Query: 169 RMMLY-SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAM 226
           R M   +N++     +VS   AC+N      L LG  +HG  LR + E N  +  +L+ M
Sbjct: 223 REMCRETNLKAEESGMVSALSACANTG---ALNLGMSIHGFLLRNISELNIIVKTSLVDM 279

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G +D+A  +F+  E R+ ++++ ++S  + + +   A+    +M   G++PD V  
Sbjct: 280 YVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVY 339

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
            S+L ACSH  ++  G+ +    L+   +   +     LVD+
Sbjct: 340 VSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDL 381



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 21/375 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD-----VYKVFDRITEKDQVSWNSM 151
           KQ+HA  +K     SS   A++++    KC    W+        +F  I +     + +M
Sbjct: 48  KQVHARFIKLSLFCSSSFSASSVL---AKCAHSGWENSMNYAASIFRGIDDPCTFDFKTM 104

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I        +++AL  +  M+   +EP +FT   +  AC+ L     +R G+Q+HG+  +
Sbjct: 105 IRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLK---AIREGKQIHGHVFK 161

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G E + F+ N+L+ MY + G ++ + T+F+  E +   SW+++ S+      + E +M 
Sbjct: 162 LGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLML 221

Query: 271 LRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            R+M     +K +   + S L AC++   L+ G  IH + LRN I   N  V ++LVDMY
Sbjct: 222 FREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRN-ISELNIIVKTSLVDMY 280

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  ++    +F  +  +    ++AMI+G+  +   E AL +F +M +  GL P+    
Sbjct: 281 VKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIK-EGLEPDHVVY 339

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            S++ AC  S    +   + G  +K G      + Y    L+D+  R G +E +      
Sbjct: 340 VSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHY--GCLVDLLGRAGLLEEALETIQS 397

Query: 447 MEV-RDTVSWNTMIT 460
           + + ++ V W + ++
Sbjct: 398 IPIEQNDVVWRSFLS 412



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 169/370 (45%), Gaps = 35/370 (9%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F+  +D     + T++        F  A+ F  +M  RGI+PD  +   +L AC+ 
Sbjct: 86  AASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTR 145

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L+ +  GK+IH +  +  +  D  FV ++L++MY  C E+E    VF+ +  K  A W++
Sbjct: 146 LKAIREGKQIHGHVFKLGLEAD-VFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSS 204

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M +         E LMLF +M     L    + M S + AC  + A      IHG  ++ 
Sbjct: 205 MFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRN 264

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
               +  V+ +L+DMY + G I+ +  IF  ME R+ ++++ MI+G+ + G+   AL + 
Sbjct: 265 ISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMF 324

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            EM              + E +   +P+ +  +++L  C     + +G+ +       ML
Sbjct: 325 SEM--------------IKEGL---EPDHVVYVSLLNACSHSGLVKEGRRVFG----EML 363

Query: 536 ATDVVVGSA-----LVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGE---- 585
               V  +A     LVD+  + G L  A      +P+ +N + W   +    +H      
Sbjct: 364 KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELG 423

Query: 586 ---GQEVLEL 592
               QE+L+L
Sbjct: 424 QIAAQELLKL 433


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/617 (37%), Positives = 355/617 (57%), Gaps = 43/617 (6%)

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G  P+  +    + +C+ L +  TGK++H +  +   L++  FV ++L+ MY  C 
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLE-PFVQTSLISMYGKCS 59

Query: 334 EVECGRRVFDF--ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
            ++  R++FD    S K    +N++++GY  N   ++ ++LF +M E+ G+  N  TM  
Sbjct: 60  LIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMREL-GVEINGVTMLG 118

Query: 392 VVPACVRSEAFPDKEG----IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           +V  C      P   G    +HG  +K GL  D  V N L+ MY + G I+  + +FD+M
Sbjct: 119 LVQPC----GIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEM 174

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             +  ++WN MI GY   G   + L L +EM++                     P+ +TL
Sbjct: 175 PRKGLITWNAMINGYAQNGLANNVLELYKEMESKGF-----------------CPDPLTL 217

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + VL  C  L AL+ GKE+         +++  + +ALV+MYA+CG L  AR +FD MPV
Sbjct: 218 VGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPV 277

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++V++W  II  YGMHG+G+  + L   M+    RGG +KP+   F+++ +ACSH+G+ +
Sbjct: 278 KSVVSWTAIIGGYGMHGQGEVAVGLFDEMI----RGG-IKPDGTAFVSVLSACSHAGLTN 332

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G+D F  M+  YG+ P  +HY+C+VDLLGRAG++ +A +LI  M    D A  W +LLG
Sbjct: 333 KGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGA-LWGALLG 391

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           AC+IH+NVE+ E+A + +  LEP    +YVLLSN+Y+ A   +  + VR  M++  ++K+
Sbjct: 392 ACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKD 451

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
           PGCS++EF   +H F AGD +H Q+ +++  L  L      E  V D      N +E  +
Sbjct: 452 PGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNEL------ENLVKDLDGCKKNDHERRE 505

Query: 808 ETL--LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDV 865
           E L  +  HSEKLA+AF +LNT   T I + KNLR+C DCH   K +SKI  R+ ++RD 
Sbjct: 506 EYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDA 565

Query: 866 RRFHHFKNGTCSCGDYW 882
            RFHHFKNG CSC +YW
Sbjct: 566 TRFHHFKNGFCSCKEYW 582



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 20/406 (4%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M RS   P+ F FP  +K+ A +     GKQ+H HV K G  L    V  +L++MYGKC 
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPF-VQTSLISMYGKC- 58

Query: 128 SDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVS 185
           S + +  K+FD    + K  V +NS+++      +    +  F  M    VE +  T++ 
Sbjct: 59  SLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLG 118

Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
           +   C        L LG  VHG  ++ G + ++ + N L+ MY K G +D  + LF    
Sbjct: 119 LVQPCGIPGN---LGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP 175

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            + L++WN +++  +QN      +   ++M  +G  PD +++  VL +C+HL  L  GKE
Sbjct: 176 RKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE 235

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           +    +       N F+ +ALV+MY  C  ++  R +FD +  K +  W A+I GYG + 
Sbjct: 236 VER-KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHG 294

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KLGL--GR 419
             E A+ LF +M    G+ P+ T   SV+ AC  S A    +G+    +   K GL  G 
Sbjct: 295 QGEVAVGLFDEMIR-GGIKPDGTAFVSVLSAC--SHAGLTNKGLDYFGVMERKYGLRPGA 351

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
           + Y  + ++D+  R GR+  ++ + + M+VR D   W  ++    I
Sbjct: 352 EHY--SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKI 395



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 10/341 (2%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           L   A +++ ++ ++ + EM    ++ +      +++      +L LG  +H   VK+G 
Sbjct: 85  LSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGL 144

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            + S +V N L+ MY K G ++    K+FD +  K  ++WN+MI    + G  +  LE +
Sbjct: 145 DMDS-SVGNCLLTMYVKSG-EIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELY 202

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
           + M      P   TLV V  +C++L     L +G++V       G   N F+ NAL+ MY
Sbjct: 203 KEMESKGFCPDPLTLVGVLSSCAHLG---ALSVGKEVERKMEGFGFSSNPFLNNALVNMY 259

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           A+ G +  A+ +F     + +VSW  I+     + +   AV    +M   GIKPDG +  
Sbjct: 260 ARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFV 319

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           SVL ACSH  + + G +      R   L   +   S +VD+      +   R + + +  
Sbjct: 320 SVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQV 379

Query: 348 KKI-ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           +   ALW A++     +   E A + F   E+V  L P  T
Sbjct: 380 RADGALWGALLGACKIHRNVELAELAF---EQVIELEPTNT 417



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 8/217 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++      +  Y EM      PD      VL + A +  LS+GK++   +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             +G+  S+  + N LVNMY +CG ++     +FD +  K  VSW ++I      G+ ++
Sbjct: 241 EGFGFS-SNPFLNNALVNMYARCG-NLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN--LSRRDGLRLGRQVHGNSLRVGEWNTFIMN 221
           A+  F  M+   ++P     VSV  ACS+  L+ +     G       LR G  +   M 
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSS 257
            L+    + GR+++A+ L +S + R D   W  ++ +
Sbjct: 359 DLL---GRAGRLNEARELIESMQVRADGALWGALLGA 392


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 389/711 (54%), Gaps = 38/711 (5%)

Query: 93  LSLGKQIHAHVVKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           L   K +H  ++K  +    S+ + N + + Y KC SD+    ++FD++++++  SW  +
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC-SDIDAACRLFDQMSQRNTFSWTVL 142

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SL 210
           IA L   G +    E F  M    + P  F    +   C  L   D + LG  VH    +
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGL---DSIELGNMVHAQIVI 199

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-M 269
           R    +TF+  AL+ MYAKL  ++D+  +F +  + ++VSWN +++  + ND +L+A  +
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDM 328
           FLR M   G+ PD  +   V  A   L  ++  KE+  YAL  ++ +D N+ VG+AL+DM
Sbjct: 260 FLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYAL--ELGVDSNTLVGTALIDM 316

Query: 329 YCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
              C  ++  R +F+  FI+ +  A WNAMI+GY ++ ++E+AL LF KM +   ++ + 
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ-NDIYLDH 375

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFD 445
            T  SV  A    +     + +H  AIK GL  +   + NA+ + Y++ G +E  + +F+
Sbjct: 376 YTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFN 435

Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
            ME RD +SW +++T Y+ C +   A+ +     NM  E                 PN  
Sbjct: 436 RMEDRDLISWTSLVTAYSQCSEWDKAIEIF---SNMRAEG--------------IAPNQF 478

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T  +VL  C  L  L  G+++H    +  L  D  + SALVDMYAKCGCL  A++VF+ +
Sbjct: 479 TFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRI 538

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
              + ++W  II  +  HG   + L+L + MV  G     V+PN VTF+ +  ACSH G+
Sbjct: 539 SNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG-----VEPNAVTFLCVLFACSHGGL 593

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG+  F  MK  YG+ P  +HYAC+VDLL R G + DA + I+ MP E ++   W +L
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM-VWQTL 652

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACR+H NVE+GE+AAQ +   + + ++ YVLLSN Y  +  +   + +R  MKE GV+
Sbjct: 653 LGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVK 712

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           KEPGCSWI     +HKF AGD  H + ++++  LE L  ++     VPD S
Sbjct: 713 KEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLS 763



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 175/614 (28%), Positives = 300/614 (48%), Gaps = 47/614 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A +  F +    + EM    I PD FA+  +L+   G+  + LG  +HA +
Sbjct: 138 SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQI 197

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+  S   V+  L+NMY K   ++ D YKVF+ +TE + VSWN+MI     F   DL
Sbjct: 198 VIRGF-TSHTFVSTALLNMYAKL-QEIEDSYKVFNTMTEVNVVSWNAMITG---FTSNDL 252

Query: 164 ALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
            L+AF +   M+   V P + T + VA A   L  RD +   ++V G +L +G + NT +
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGML--RD-VNKAKEVSGYALELGVDSNTLV 309

Query: 220 MNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
             AL+ M +K G + +A+++F S     R    WN ++S   ++    +A+    +M   
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
            I  D  +  SV  A + L+ L  GK++HA A+++ + ++   + +A+ + Y  C  +E 
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            R+VF+ + D+ +  W +++T Y Q    ++A+ +F  M    G+ PN  T SSV+ +C 
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNM-RAEGIAPNQFTFSSVLVSCA 488

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                   + +HG   K+GL  D+ +++AL+DMY++ G +  +K +F+ +   DTVSW  
Sbjct: 489 NLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I G+   G   DAL L R M  +  E                 PN++T + VL  C   
Sbjct: 549 IIAGHAQHGIVDDALQLFRRMVQLGVE-----------------PNAVTFLCVLFACSHG 591

Query: 518 SALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNV 575
             + +G +      +   L  ++   + +VD+ ++ G LN A      MPV  N + W  
Sbjct: 592 GLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651

Query: 576 IIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           ++ A  +HG    G+   + + +  AE         N  T++ L      SG   +G+ L
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAE---------NSATYVLLSNTYIESGSYKDGLSL 702

Query: 633 FYKMKDDYGIEPSP 646
            + MK+  G++  P
Sbjct: 703 RHLMKEQ-GVKKEP 715



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 154/264 (58%), Gaps = 5/264 (1%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R    W   +    RS    +A+  + +M ++DI  D++ + +V  A+A ++ LSLGK++
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA  +K G  ++ V+++N + N Y KCGS + DV KVF+R+ ++D +SW S++    +  
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGS-LEDVRKVFNRMEDRDLISWTSLVTAYSQCS 456

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
           +WD A+E F  M    + P+ FT  SV ++C+NL     L  G+QVHG   +VG + +  
Sbjct: 457 EWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL---LEYGQQVHGIICKVGLDMDKC 513

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           I +AL+ MYAK G + DAK +F    + D VSW  I++  +Q+    +A+   R+M   G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 279 IKPDGVSIASVLPACSHLEMLDTG 302
           ++P+ V+   VL ACSH  +++ G
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEG 597


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/793 (33%), Positives = 413/793 (52%), Gaps = 45/793 (5%)

Query: 23  QPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPA 82
           QP   +  S  LP        S+I  L  +    +  EA   +++ + S  +P  +   +
Sbjct: 113 QPAIFSNLSKELP------TNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYT--S 164

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE 142
           ++ A A  + L   K+IH HV+K  Y   S+ + N ++NMYGKCGS M D  KVFD +  
Sbjct: 165 LVLACANFRSLDYAKKIHDHVLKSNYQ-PSIILQNHMINMYGKCGS-MKDARKVFDTMQL 222

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
            + VSW SMI+   + G+ + A+  +  M  S   P   T  SV  AC      D   LG
Sbjct: 223 PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDID---LG 279

Query: 203 RQVHGNSLRVGEW---NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           RQ+H + ++   W   +    NAL++MY   G+++ A  +F     +DL+SW T+++   
Sbjct: 280 RQLHAHVIK--SWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYI 337

Query: 260 QNDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           Q    +EA+   R +  +G  +P+     SV  ACS L  L+ GK++H   ++   L  N
Sbjct: 338 QLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFG-LRRN 396

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F G +L DMY     +   +  F  I +  I  WNA+I  +  N    EA+  F +M  
Sbjct: 397 VFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIH 456

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           + GL P++ T  S++  C           IH + +K+G  ++  V N+L+ MY++   + 
Sbjct: 457 I-GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLH 515

Query: 439 ISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            +  +F D+    + VSWN +++      Q G+   L +EM                   
Sbjct: 516 DALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN-------------- 561

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
              KP+SIT+ T+L  C  L++L  G ++H Y+I++ L  DV V + L+DMYAKCG L  
Sbjct: 562 ---KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKH 618

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           AR VFD     ++++W+ +I+ Y   G G E L L + M   G     V+PNEVT++   
Sbjct: 619 ARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG-----VQPNEVTYLGAL 673

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
           +ACSH G+V EG  L+  M+ ++GI P+ +H++C+VDLL RAG + +A   I     + D
Sbjct: 674 SACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDAD 733

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
              AW +LL AC+ H NV+I E  A N+  L+P  ++  V+L NI++SA  W++   +RK
Sbjct: 734 IT-AWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRK 792

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK+MGV+K PG SWIE  D+ H F + D SH Q   ++  LE L  ++  +GY P  SC
Sbjct: 793 LMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPCQSC 852

Query: 798 VLHNVNEEEKETL 810
            + N+  ++K  +
Sbjct: 853 YIQNMYLKKKNYI 865


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/817 (32%), Positives = 417/817 (51%), Gaps = 59/817 (7%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D  A+ ++LK    +  L   K I AH+           + N +V  YGKCG  + D   
Sbjct: 82  DPAAYVSLLKQAGDVTAL---KTIQAHISHSKRFSGDRLLLNCVVEAYGKCGC-VKDARL 137

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF  I   +  SW  ++A   + G     LE  R M    V P++ TL +V  A S L  
Sbjct: 138 VFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGD 197

Query: 196 RDGLRLGRQVHGNSLRVGE--WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            D     R++H  +    +  ++  ++ AL+ MYAK G +  A+ +F    ++DL   N 
Sbjct: 198 WDE---ARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNA 254

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YA 309
           ++S+  Q    ++AV    ++   G++P+ V+ A +  AC+   +    +  H       
Sbjct: 255 MISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSK 314

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           LR D++++     +ALV MY  C  +E  RRVFD +  K +  WN MI GY Q  Y +EA
Sbjct: 315 LRPDVVVN-----TALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L L++ ME  AG+ P+  T  +V+ +C  +E       IH H +  G      V +AL+ 
Sbjct: 370 LQLYVSME-AAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALIT 428

Query: 430 MYSRMGRIEISKTIFDD--MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           MYS  G +  +  +F          +SW  M+T  T  G+   AL L R+M         
Sbjct: 429 MYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKM--------- 479

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
               DL+      K N +T ++ +  C ++ AL +G  I    I      DVV+G++L++
Sbjct: 480 ----DLEGV----KANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLIN 531

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           +Y KCG L++A  VF  +  +N++TWN I+ A   +GE     ELL+ M  +G+     +
Sbjct: 532 LYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGA-----Q 586

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PNE+T + +   CSH+G+V++ +  F  M   + + P+ +HY C+VDLLGR+G++E+   
Sbjct: 587 PNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEA 646

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I+  P   D    W SLLG+C IH +VE G  AA+ +  L+P  AS YVLLSN++++  
Sbjct: 647 FISSKPFSLDSV-LWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIG 705

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           + D    + K   E  ++KE   S+IE    +H+F    G H+  E++   L   SE M 
Sbjct: 706 MLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEME 765

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + G+VP     LH+V           H EKLAIAFG +++PPG  + V KNLR+C  CH 
Sbjct: 766 EAGFVP-----LHDVRGY--------HDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHG 812

Query: 848 ATKFISKIESREIILRDVRRFHHFK--NGTCSCGDYW 882
             K I K+  R+I +R+  R HHF+  + +CSCGDYW
Sbjct: 813 EIKHICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 234/516 (45%), Gaps = 37/516 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + A++   +  +    +M    + P+      V+ AV+ + D    ++IHA  
Sbjct: 149 SWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARA 208

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                    V +   L++MY KCG D++    VFD+   KD    N+MI+   + G    
Sbjct: 209 AATCQLTYDVVLVTALIDMYAKCG-DIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVD 267

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS-LRVGEWNTFIMNA 222
           A+  F  +  S ++P+  T   +  AC+        R+       S LR    +  +  A
Sbjct: 268 AVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRP---DVVVNTA 324

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY++ G ++DA+ +F     +++V+WN +++  +Q     EA+     M   G++PD
Sbjct: 325 LVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPD 384

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRV 341
            ++  +VL +CS  E L  G++IH + +  D   D+S  V SAL+ MY  C  +     V
Sbjct: 385 EITFVNVLESCSLAEHLAAGRDIHKHVV--DAGYDSSLTVLSALITMYSACGSLGDAVDV 442

Query: 342 FD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           F     +   +  W AM+T   +N     AL LF KM ++ G+  N  T  S + AC   
Sbjct: 443 FHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKM-DLEGVKANVVTFVSTIDACSSI 501

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A  +   I    I  G   D  +  +L+++Y + GR++ +  +F  +  ++ V+WNT++
Sbjct: 502 GALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTIL 561

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
              +  G+   +  LL+EM             DLD      +PN +TL+ +L GC     
Sbjct: 562 AASSQNGEETLSAELLQEM-------------DLDGA----QPNEMTLLNMLFGCSHNGL 604

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           +AK         R+M     V G  LV      GCL
Sbjct: 605 VAKAVSY----FRSM-----VYGHCLVPTSEHYGCL 631



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 11/312 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     EA+  Y+ M  + ++PD   F  VL++ +  + L+ G+ IH HV
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV 411

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKW 161
           V  GY  SS+TV + L+ MY  CGS + D   VF +   T    +SW +M+  L R G+ 
Sbjct: 412 VDAGYD-SSLTVLSALITMYSACGS-LGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             AL  FR M    V+ +  T VS   ACS++     L  G  +    +  G     ++ 
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIG---ALVEGHAIFERVIVTGYLIDVVLG 526

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ +Y K GR+D A  +F     +++V+WNTI+++ SQN +   +   L++M L G +
Sbjct: 527 TSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQ 586

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ +++ ++L  CSH  ++          +    L+  S     LVD+     ++E    
Sbjct: 587 PNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLE---E 643

Query: 341 VFDFISDKKIAL 352
           V  FIS K  +L
Sbjct: 644 VEAFISSKPFSL 655


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 270/841 (32%), Positives = 433/841 (51%), Gaps = 117/841 (13%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG------------ 127
           F   ++A A  + L   K +H  + +  +G  +  + N L++++GKCG            
Sbjct: 10  FEERIRACAIGRKLHEAKILHDEIARSPHG-DNRRLTNLLIDLFGKCGDPDAARAVFNRV 68

Query: 128 ------------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
                             S + D   +FD +   D  +WN MIA   R  + D A E F 
Sbjct: 69  RLPNEYSWSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFH 128

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
            M+      S   +VS A+  +  +R D L    +      R+  W+T    +++  YA 
Sbjct: 129 GMI------SGRDVVSWAILVAGYARHDRLE---EASALFRRMPLWDTVTCTSVLQGYAH 179

Query: 230 LGRVDDAKTLFKSFE---DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
            G + +A+ LF       DRD  + N ++++  +N +   A     Q+ LR    +  S 
Sbjct: 180 NGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLR----NAASW 235

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           + +L   +    LD  K+      + D     S   +A+  +  +  E+   R +  ++S
Sbjct: 236 SLLLLTYAQNGHLDLAKKSFDRMPQRD-----SIAFTAMTAVLSDQGELRGAREMLRYLS 290

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
              +  WNA++ GY +    +E   LF  ME          T+++ V             
Sbjct: 291 AVDVIAWNALLEGYSRTGDLDEVRRLFSAMEH--------RTVATTV------------- 329

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
                           V   L+++Y + GR++ ++ + D M VR +VSW  MI  Y    
Sbjct: 330 ----------------VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAY---A 370

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           Q+G+A   +   Q M+ E                +P+ ITL++V+  C  L  L+ GK I
Sbjct: 371 QNGNAAEAINLFQCMDLEG--------------AEPSDITLISVVDSCAVLGTLSLGKRI 416

Query: 527 HAYAIRN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR--NVITWNVIIMAYGM 582
           HA  IR+  + +  +++ +A++ MY KCG L  AR VF+ +P+R  +V+TW  +I AY  
Sbjct: 417 HAR-IRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQ 475

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           +G G+E +EL + MV +G      +PN VTF+++ +ACSH G + +  + F  M  D+G+
Sbjct: 476 NGVGEEAIELFQEMVIDGG----TEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGV 531

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK-AGAWSSLLGACRIHQNVEIGEIA 701
            P+ DHY C+VDLLGRAG++ +A +L+ +   +F+     W + L AC+++ ++E  + A
Sbjct: 532 PPAGDHYCCLVDLLGRAGRLGEAEKLL-LRHKDFEADVVCWIAFLSACQMNGDLERSQRA 590

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           A+ +  LEP+  +  VLLSN+Y++         +R +MK  GV+K  G SWIE  + +H+
Sbjct: 591 AKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHE 650

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+  D SH +  +++  LE L   +++ GYVPDT  VL +V+EE+K  LL  HSE+LA+A
Sbjct: 651 FMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMA 710

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
            GI++TPPGTT+RV KNLRVC+DCH ATKFIS+I  R+II+RD  RFHHFK+G CSCGDY
Sbjct: 711 LGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDY 770

Query: 882 W 882
           W
Sbjct: 771 W 771



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 11/243 (4%)

Query: 67  EMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           EM R     D  A+ A+L+  +   DL   +++ + +      +++  VA TLVN+YGKC
Sbjct: 284 EMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRT--VATTVVAGTLVNLYGKC 341

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G  + D  +V D +  +  VSW +MIA   + G    A+  F+ M     EPS  TL+SV
Sbjct: 342 GR-VDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISV 400

Query: 187 ALACSNLSRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKS-- 242
             +C+ L     L LG+++H    S  +   +  ++NA++ MY K G ++ A+ +F+S  
Sbjct: 401 VDSCAVLG---TLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVP 457

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDT 301
              R +V+W  ++ + +QN    EA+   ++M +  G +P+ V+  SVL ACSHL  L+ 
Sbjct: 458 LRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQ 517

Query: 302 GKE 304
             E
Sbjct: 518 AWE 520



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 27/243 (11%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           L     R   SW   + + A++    EAI  +  M     +P +    +V+ + A +  L
Sbjct: 351 LDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTL 410

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSM 151
           SLGK+IHA +        S+ + N ++ MYGKCG ++    +VF+ +  + +  V+W +M
Sbjct: 411 SLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCG-NLELAREVFESVPLRTRSVVTWTAM 469

Query: 152 IATLCRFGKWDLALEAFR-MMLYSNVEPSSFTLVSVALACSNLSRRD---------GLRL 201
           I    + G  + A+E F+ M++    EP+  T +SV  ACS+L + +         G   
Sbjct: 470 IRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDF 529

Query: 202 GRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLF---KSFEDRDLVSWNTIVSSL 258
           G    G+              L+ +  + GR+ +A+ L    K FE  D+V W   +S+ 
Sbjct: 530 GVPPAGDH----------YCCLVDLLGRAGRLGEAEKLLLRHKDFEA-DVVCWIAFLSAC 578

Query: 259 SQN 261
             N
Sbjct: 579 QMN 581


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/580 (38%), Positives = 341/580 (58%), Gaps = 23/580 (3%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           ++IHA  +   +    S +   L   Y     +   RR+F  I      L++++IT   +
Sbjct: 36  QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSK 95

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
             + +E+L+ + +M  +A +  +  T S+V+ +     AF   E IH H    G G D Y
Sbjct: 96  FSFPQESLLCYRRML-LANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAY 154

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           VQ AL+  Y++ G + I++ +FD M  +  V+WN+MI+GY   G   +A+ L   MQ+  
Sbjct: 155 VQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQD-- 212

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                          L  KP+S T +++L  C  + A+  G  +H Y  RN    +VV+G
Sbjct: 213 ---------------LGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLG 257

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           +AL++MY++CG ++ AR VFD M  +N++ W  +I  YGMHG G + +EL   M  +G R
Sbjct: 258 TALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPR 317

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
                PN VTF+A+ +AC+H+G+V EG  +F  MK +YG+ PS +H  C+VD+LGRAG +
Sbjct: 318 -----PNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHL 372

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            +AYQ I    P+      W+++LGAC++H+N ++G   A++L  +EP+   HYV+LSNI
Sbjct: 373 NEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNI 432

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A   D+   +R  M    ++KE G S I+   +++ F  GD SH ++ Q++ +L+ L
Sbjct: 433 YALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDEL 492

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
             R R+ GY+P +  V+H V EEE+E  L  HSEKLAIAFG+L T  G  IR+ KNLR+C
Sbjct: 493 MSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMC 552

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A K+IS I +REI +RD  RFHHFK+G+CSC DYW
Sbjct: 553 EDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 213/475 (44%), Gaps = 66/475 (13%)

Query: 203 RQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           +Q+H   +   +G   + I   L   YA    +   + LF S    D   ++++++  S+
Sbjct: 36  QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSK 95

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
                E+++  R+M L  I     + ++V+ + + L     G+ IH +       +D ++
Sbjct: 96  FSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLD-AY 154

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V +ALV  Y     V   R+VFD + +K +  WN+MI+GY QN + +EA+ LF  M+++ 
Sbjct: 155 VQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDL- 213

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ P+++T  S++ AC +  A      +H +  +     +  +  ALM+MYSR G +  +
Sbjct: 214 GVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKA 273

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +FD ME ++ V+W  MI+GY + G    A+ L  EM            +D       P
Sbjct: 274 REVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMS-----------FD------GP 316

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFAR 559
           +PN++T + VL  C     + +G++I     +   L   V     +VDM  + G LN   
Sbjct: 317 RPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLN--- 373

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
                                       E  + +KN   +       +P    + A+  A
Sbjct: 374 ----------------------------EAYQFIKNTSPK-------EPAPAVWTAMLGA 398

Query: 620 CSHSGMVSEGMDLFYKMKDD-YGIEP-SPDHYACVVDLLGRAGKVEDAYQLINMM 672
           C     + +  DL  ++ +    IEP +P HY  + ++   AG+++   ++ N+M
Sbjct: 399 CK----MHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIM 449



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 8/302 (2%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           +E++L Y  M  ++I   N+ F AV+K+ A +   S+G+ IH HV   GYGL +   A  
Sbjct: 100 QESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQA-A 158

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           LV+ Y K G  M    KVFD++ EK  V+WNSMI+   + G    A+E F +M    V+P
Sbjct: 159 LVSFYAKSGHVMI-ARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKP 217

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDDAK 237
            S T VS+  AC+ +     + LG  VH    R   + N  +  ALM MY++ G V  A+
Sbjct: 218 DSSTFVSLLSACAQVG---AIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAR 274

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
            +F S E++++V+W  ++S    +    +A+    +M+  G +P+ V+  +VL AC+H  
Sbjct: 275 EVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAG 334

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALWNA 355
           ++D G++I     +   L+ +      +VDM      +    +     S K+   A+W A
Sbjct: 335 LVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTA 394

Query: 356 MI 357
           M+
Sbjct: 395 ML 396



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 7/163 (4%)

Query: 44  SWIESLRSEARSNQF-REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W  S+ S    N F +EA+  +  M    ++PD+  F ++L A A +  + LG  +H +
Sbjct: 186 AW-NSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEY 244

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + +  + L +V +   L+NMY +CG ++    +VFD + EK+ V+W +MI+     G   
Sbjct: 245 IARNCFDL-NVVLGTALMNMYSRCG-NVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGS 302

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQV 205
            A+E F  M +    P++ T V+V  AC++    D    GRQ+
Sbjct: 303 QAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDE---GRQI 342


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/618 (39%), Positives = 355/618 (57%), Gaps = 33/618 (5%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC--NCREVECGRRVFD 343
           + SVL  C+H+  +   K++HA+  R   L    FV + L+      +       R VF 
Sbjct: 42  LVSVLHGCTHINQV---KQVHAHIFRKG-LEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQ 97

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            +      LW A+I GY       E+++L+  M    G+ P + T ++++ AC  +    
Sbjct: 98  QVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRR-QGIGPVSFTFTALLKACSAALDVN 156

Query: 404 DKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
               +H   I +G  G D YV N L+DMY + G +     +FD+M  RD +SW ++I  Y
Sbjct: 157 LGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAY 216

Query: 463 TICGQHGDALMLLR--EMQNM-----------EEEKNRNNVYDLDE-TVLRPKPNSITLM 508
              G    A  L     M++M           +  + R  +   +       K + +TL+
Sbjct: 217 AKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLV 276

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLA--TDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
            V+  C  L A      +   A ++     ++VVVGSAL+DMYAKCG +  A +VF+ M 
Sbjct: 277 GVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERME 336

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            RNV +++ +I+ + MHG     +EL   M+       E+KPN VTFI +  ACSH+GMV
Sbjct: 337 ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKT-----EIKPNRVTFIGVLTACSHAGMV 391

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            +G  LF  M++ +G+ PS DHYAC+VDLLGRAG++E+A  L+ MMP      G W +LL
Sbjct: 392 EQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMN-PHGGVWGALL 450

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
           GACRIH N ++ +IAA +LF LEP+   +Y+LLSNIY+SA  WD    VRK M+  G++K
Sbjct: 451 GACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKK 510

Query: 747 EPGCSWIEFGDE--IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
            PGCSW+E G +  IH+F AGD SH +S ++   LE+L +R++  GY P+ S V +++++
Sbjct: 511 NPGCSWVE-GKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISD 569

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           EEK+ LL  HSEKLA+AFG+L T  G TIR+ KNLR+C DCH      S+I  REI++RD
Sbjct: 570 EEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRD 629

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHF++G CSCG++W
Sbjct: 630 NMRFHHFRDGRCSCGNFW 647



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 198/440 (45%), Gaps = 62/440 (14%)

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDA--KTL 239
           LVSV   C+++++       +QVH +  R G E   F++  L+    KL    D   + +
Sbjct: 42  LVSVLHGCTHINQV------KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLV 95

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+  E  +   W  ++   +    F+E+V+    M  +GI P   +  ++L ACS    +
Sbjct: 96  FQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV 155

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD------------ 347
           + G+++H   +       + +VG+ L+DMY  C  + CG RVFD + D            
Sbjct: 156 NLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215

Query: 348 -------------------KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
                              K +  W AM+TGY QN    EAL +F +M + AG+  +  T
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM-QAAGVKTDEVT 274

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLG--RDRYVQNALMDMYSRMGRIEISKTIFDD 446
           +  V+ AC +  A      +   A + G G   +  V +AL+DMY++ G +E +  +F+ 
Sbjct: 275 LVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFER 334

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           ME R+  S+++MI G+ + G  G A+ L  EM   E                  KPN +T
Sbjct: 335 MEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTE-----------------IKPNRVT 377

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
            + VL  C     + +G+++ A     + +A      + +VD+  + G L  A  +  +M
Sbjct: 378 FIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437

Query: 566 PVR-NVITWNVIIMAYGMHG 584
           P+  +   W  ++ A  +HG
Sbjct: 438 PMNPHGGVWGALLGACRIHG 457



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 30/293 (10%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A    F E++L Y  M R  I P +F F A+LKA +   D++LG+Q+H   +
Sbjct: 107 WTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTI 166

Query: 105 KYGYGLSSVTVANTLVNMYGKCG------------------------------SDMWDVY 134
             G   S + V NTL++MY KCG                               +M    
Sbjct: 167 LIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAAS 226

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FD +  KD V+W +M+    +  +   ALE F  M  + V+    TLV V  AC+ L 
Sbjct: 227 ELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLG 286

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
                   R V   S      N  + +AL+ MYAK G V+DA  +F+  E+R++ S++++
Sbjct: 287 AAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSM 346

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
           +   + +     A+    +M    IKP+ V+   VL ACSH  M++ G+++ A
Sbjct: 347 IVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFA 399



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 175/399 (43%), Gaps = 55/399 (13%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK--VFDRI 140
           ++  + G   ++  KQ+HAH+ + G       +A  L+    K    M D Y   VF ++
Sbjct: 42  LVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAK-LLRTLTKLDVPM-DPYPRLVFQQV 99

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
              +   W ++I      G +  ++  +  M    + P SFT  ++  ACS  +  D + 
Sbjct: 100 EYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS--AALD-VN 156

Query: 201 LGRQVHGNSLRVGEW-------NTFI--------------------------MNALMAMY 227
           LGRQVH  ++ +G +       NT I                            +L+  Y
Sbjct: 157 LGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAY 216

Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
           AK+G ++ A  LF     +D+V+W  +V+  +QN +  EA+    +M   G+K D V++ 
Sbjct: 217 AKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLV 276

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            V+ AC+ L        +   A ++      N  VGSAL+DMY  C  VE   +VF+ + 
Sbjct: 277 GVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERME 336

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS------- 399
           ++ +  +++MI G+  +     A+ LF +M +   + PN  T   V+ AC  +       
Sbjct: 337 ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTE-IKPNRVTFIGVLTACSHAGMVEQGQ 395

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           + F   E  HG A       D Y    ++D+  R GR+E
Sbjct: 396 QLFAMMEECHGVAPS----EDHYA--CMVDLLGRAGRLE 428



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++ + REA+  +  M  + ++ D      V+ A A +        +    
Sbjct: 239 AWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVA 298

Query: 104 VKYGYG-LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            + G+G  S+V V + L++MY KCGS + D YKVF+R+ E++  S++SMI      G   
Sbjct: 299 EQSGFGPTSNVVVGSALIDMYAKCGS-VEDAYKVFERMEERNVYSYSSMIVGFAMHGLAG 357

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            A+E F  ML + ++P+  T + V  ACS+
Sbjct: 358 AAMELFDEMLKTEIKPNRVTFIGVLTACSH 387


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/654 (35%), Positives = 364/654 (55%), Gaps = 28/654 (4%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           + +N  +  LS++ +    ++F +++   G + D  S   +L A S +  L  G E+H  
Sbjct: 77  IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           A +   L D  FV +  +DMY +C  +   R VFD +S + +  WN MI  Y +    +E
Sbjct: 137 AFKIATLCD-PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A  LF +M++ + + P+   + ++V AC R+        I+   I+  +  D ++  AL+
Sbjct: 196 AFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------- 480
            MY+  G +++++  F  M VR+      M++GY+ CG+  DA ++  + +         
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314

Query: 481 -----MEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
                +E +  +  +   +E      KP+ +++ +V+  C  L  L K K +H+    N 
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           L +++ + +AL++MYAKCG L+  R VF+ MP RNV++W+ +I A  MHGE  + L L  
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  E      V+PNEVTF+ +   CSHSG+V EG  +F  M D+Y I P  +HY C+VD
Sbjct: 435 RMKQEN-----VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           L GRA  + +A ++I  MP        W SL+ ACRIH  +E+G+ AA+ +  LEPD   
Sbjct: 490 LFGRANLLREALEVIESMPVA-SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
             VL+SNIY+  Q W+   ++R+ M+E  V KE G S I+   + H+FL GD  H+QS +
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE 608

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT--- 831
           ++  L+ +  +++  GYVPD   VL +V EEEK+ L+  HSEKLA+ FG++N        
Sbjct: 609 IYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKD 668

Query: 832 ---TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
               IR+ KNLRVC DCH   K +SK+  REII+RD  RFH +KNG CSC DYW
Sbjct: 669 SCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 44/456 (9%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR  +RS++ R  IL Y  +     + D F+F  +LKAV+ +  L  G ++H    K   
Sbjct: 83  LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIA- 141

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            L    V    ++MY  CG   +    VFD ++ +D V+WN+MI   CRFG  D A + F
Sbjct: 142 TLCDPFVETGFMDMYASCGRINY-ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLF 200

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEW--------- 215
             M  SNV P    L ++  AC    R   +R  R ++     N +R+            
Sbjct: 201 EEMKDSNVMPDEMILCNIVSAC---GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257

Query: 216 -------------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
                              N F+  A+++ Y+K GR+DDA+ +F   E +DLV W T++S
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
           +  ++D   EA+    +M   GIKPD VS+ SV+ AC++L +LD  K +H+    N +  
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES 377

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
           + S + +AL++MY  C  ++  R VF+ +  + +  W++MI     +    +AL LF +M
Sbjct: 378 ELS-INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMG 435
           ++   + PN  T   V+  C  S    + + I      +  +         ++D++ R  
Sbjct: 437 KQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495

Query: 436 RIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGD 470
            +  +  + + M V  + V W ++++    C  HG+
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSA---CRIHGE 528



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 246/544 (45%), Gaps = 69/544 (12%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY------GKCGSDMWDVYK 135
            +L+ ++  + L+  KQ+HAH+++        TV N  +N +           ++     
Sbjct: 14  TILEKLSFCKSLNHIKQLHAHILR--------TVINHKLNSFLFNLSVSSSSINLSYALN 65

Query: 136 VFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           VF  I +  + + +N  +  L R  +    +  ++ + +       F+ + +  A S +S
Sbjct: 66  VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125

Query: 195 RRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
               L  G ++HG + ++    + F+    M MYA  GR++ A+ +F     RD+V+WNT
Sbjct: 126 ---ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++    +     EA     +M    + PD + + +++ AC     +   + I+ + + ND
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242

Query: 314 ILID------------------------------NSFVGSALVDMYCNCREVECGRRVFD 343
           + +D                              N FV +A+V  Y  C  ++  + +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
               K +  W  MI+ Y +++Y +EAL +F +M   +G+ P+  +M SV+ AC       
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSVISACANLGILD 361

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + +H      GL  +  + NAL++MY++ G ++ ++ +F+ M  R+ VSW++MI   +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           + G+  DAL L   M+       + NV          +PN +T + VL GC     + +G
Sbjct: 422 MHGEASDALSLFARMK-------QENV----------EPNEVTFVGVLYGCSHSGLVEEG 464

Query: 524 KEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYG 581
           K+I A        T  +     +VD++ +   L  A  V + MPV  NV+ W  ++ A  
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524

Query: 582 MHGE 585
           +HGE
Sbjct: 525 IHGE 528



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   + +   S+  +EA+  + EM  S I+PD  +  +V+ A A +  L   K +H+ + 
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
             G   S +++ N L+NMY KCG  +     VF+++  ++ VSW+SMI  L   G+   A
Sbjct: 372 VNGLE-SELSINNALINMYAKCGG-LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDA 429

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN 192
           L  F  M   NVEP+  T V V   CS+
Sbjct: 430 LSLFARMKQENVEPNEVTFVGVLYGCSH 457


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/817 (32%), Positives = 407/817 (49%), Gaps = 75/817 (9%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
            SL + +HAH++  G+        N L+ MY K  S++    ++F+ I   D ++  ++I
Sbjct: 29  FSLARAVHAHMIASGFKPRG-HFLNRLLEMYCK-SSNVVYARQLFEEIPNPDAIARTTLI 86

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
              C  G                                       L LGR++  N   +
Sbjct: 87  TAYCALGN--------------------------------------LELGREIF-NGTPL 107

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN-TIVSSLSQNDKFLEAVMFL 271
              ++   NA++  YA  G    A  LF++    D    + T  S LS    F+      
Sbjct: 108 YMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQC 167

Query: 272 RQMALRGIKPD-GVSIASVLPACSHLEM-------LDTGKEIHAYALRNDILIDNSFVGS 323
            QM    +K   G   +SVL A   + +       +     + A  L +++   +    +
Sbjct: 168 GQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWT 227

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
            ++  Y    ++   R VF+ + +   A WNAMI+GY      +EAL L  KM  + G+ 
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFL-GIQ 286

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY----VQNALMDMYSRMGRIEI 439
            +  T ++++ AC    +F   + +H + +K  L  +      V NAL+ +Y +  +++ 
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM--------QNMEEEKNRNNVY 491
           ++ IF  M VR+ ++WN +++GY   G+  +A     EM          M     +N   
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406

Query: 492 DLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
           D    + +       +P        L  C  L AL  G+++HA  +     + + VG+A+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           + MYAKCG +  A  VF  MP  ++++WN +I A G HG G + +EL   M+ EG     
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEG----- 521

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
           V P+ +TF+ +  ACSH+G+V +G   F  M + YGI P  DHYA +VDL  RAG    A
Sbjct: 522 VFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA 581

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS 725
             +I+ MP +   A  W +LL  CRIH N+++G  AA+ LF L P     YVLLSNIY+ 
Sbjct: 582 RIVIDSMPSK-PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYAD 640

Query: 726 AQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSER 785
              W+    VRK M++  VRKEP CSWIE  +++H F+  D  H +   ++ +LE L   
Sbjct: 641 VGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLE 700

Query: 786 MRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 845
           M+K GY+PDT  VLH++  E+KE  L  HSEKLA+ FGI+  PP  T+RV KN+R+C DC
Sbjct: 701 MKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDC 760

Query: 846 HQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           H A KF+SK+  REII+RD +RFHHFKNG CSC DYW
Sbjct: 761 HNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 218/485 (44%), Gaps = 95/485 (19%)

Query: 68  MTRSDIQPDNFAFPAVLKA-VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M R D +PD+F F +VL A V  + +     Q+H  VVK G G  S +V N L+++Y K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 127 GSD-------MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF----------- 168
            S+       M    K+FD + ++D+++W +MI    R    + A E F           
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 169 --------------------RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
                               R M +  ++    T  ++  AC+N+      ++G+Q+H  
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVG---SFQMGKQMHAY 314

Query: 209 SLR--VGEWNTF---IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI--------- 254
            L+  +   ++F   + NAL+ +Y K  +VD+A+ +F +   R++++WN I         
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGR 374

Query: 255 ----------------------VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
                                 +S L+QN    E +   +QM L G +P   + A  L A
Sbjct: 375 MEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTA 434

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           CS L  L+ G+++HA  +   +  ++S  VG+A++ MY  C  VE    VF  +    + 
Sbjct: 435 CSVLGALENGRQLHAQLVH--LGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG- 410
            WN+MI   GQ+ +  +A+ LF +M +  G++P+  T  +V+ AC  S A   ++G H  
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLK-EGVFPDRITFLTVLTAC--SHAGLVEKGRHYF 549

Query: 411 ----HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTIC 465
                +  +    D Y +  ++D++ R G    ++ + D M  +     W  ++ G   C
Sbjct: 550 NSMLESYGITPCEDHYAR--MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG---C 604

Query: 466 GQHGD 470
             HG+
Sbjct: 605 RIHGN 609



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 46/355 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +        F+EA+    +M    IQ D+  +  ++ A A +    +GKQ+HA++
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYI 315

Query: 104 VK------YGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS------- 150
           +K      + + LS   V+N L+ +Y K  + + +  K+F  +  ++ ++WN+       
Sbjct: 316 LKNELNPNHSFCLS---VSNALITLYCK-NNKVDEARKIFYAMPVRNIITWNAILSGYVN 371

Query: 151 ------------------------MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
                                   MI+ L + G  D  L+ F+ M     EP  F     
Sbjct: 372 AGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGA 431

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             ACS L     L  GRQ+H   + +G E +  + NA+++MYAK G V+ A+++F +   
Sbjct: 432 LTACSVLG---ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS 488

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
            DLVSWN+++++L Q+   ++A+    QM   G+ PD ++  +VL ACSH  +++ G+  
Sbjct: 489 VDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHY 548

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA-LWNAMITG 359
               L +  +       + +VD++C        R V D +  K  A +W A++ G
Sbjct: 549 FNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 160/414 (38%), Gaps = 98/414 (23%)

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +F     +H H I  G     +  N L++MY +   +  ++ +F+++   D ++  T+IT
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVY------------------DLDETVLRP-- 500
            Y   G     L L RE+ N      R++V+                  +L   + R   
Sbjct: 88  AYCALGN----LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDF 143

Query: 501 KPNSITLMTVLPGCGALSALAKGKE-----IHAYAIRN-MLATDVVVGSALVDMYAK--- 551
           +P+  T  +VL        L  G E     +H   ++  M      V +AL+ +Y K   
Sbjct: 144 RPDDFTFTSVLSAL----VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRAS 199

Query: 552 -----CGCLNFARRVFDLMPVRNVIT-------------------------------WNV 575
                C  +  AR++FD MP R+ +T                               WN 
Sbjct: 200 ELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-Y 634
           +I  Y   G  QE L L + M   G     ++ +++T+  + +AC++ G    G  +  Y
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLG-----IQFDDITYTTIISACANVGSFQMGKQMHAY 314

Query: 635 KMKDDYGIEPSPDHYAC------VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            +K+    E +P+H  C      ++ L  +  KV++A ++   MP        W+++L  
Sbjct: 315 ILKN----ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSG 368

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ--LWDKAMDVRKKMK 740
                 V  G +     F  E  V +   L   I   AQ    D+ + + K+M+
Sbjct: 369 -----YVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 253/783 (32%), Positives = 412/783 (52%), Gaps = 103/783 (13%)

Query: 95  LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
           LGKQ+HAH +K G+      +   L+ MY +CG  + D   +F+ +  ++  SW ++++ 
Sbjct: 77  LGKQVHAHTIKTGFDADGF-IDTKLLQMYARCGL-LKDADFLFETMPMRNLHSWKAILSV 134

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
               G ++ A   F+++ +  VE   F    V  ACS L     + LGRQ+HG  ++   
Sbjct: 135 YLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLG---SVELGRQLHGLVIKFRF 191

Query: 215 -WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             N ++ NAL+ MY K G +DDAK +     +RD V+WN+++++ + N    EA+ FL +
Sbjct: 192 CLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEK 251

Query: 274 MA------------------------------------LRGIKPDGVSIASVLPACSHLE 297
           M                                     + G+ P+  ++A VLPAC+ L+
Sbjct: 252 MKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQ 311

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDM----------------------------- 328
            LD GK++H Y  R+D  I N  V +ALVD+                             
Sbjct: 312 RLDLGKQLHGYITRHD-FISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMI 370

Query: 329 --YCNCREVECGRRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
             YC   +V   + +FD +     ++ +  WN++I+GY +N   +EA  +F  M    G+
Sbjct: 371 VGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGI 430

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            P++ T+ SV+ AC  + +    + IH  AI  GL  D +V  AL++MYS+   +  ++ 
Sbjct: 431 EPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQV 490

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN------------RNNV 490
            FD++  +D  +WN +I+GYT   Q      LL +M+      N             N  
Sbjct: 491 AFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQ 550

Query: 491 YDL------DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
            DL      +  + + +P+  T+  +LP C  L+ L +GK+ HA++I+    TDV +G+A
Sbjct: 551 LDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAA 610

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LVDMYAKCG L +A+  +D +   N+++ N ++ A  MHG G+E + L + M+A G    
Sbjct: 611 LVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALG---- 666

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
              P+ VTF+++ ++C H G V  G + F+ +   Y ++P+  HY  +VDLL R+G++ +
Sbjct: 667 -FIPDHVTFLSVLSSCVHVGSVETGCE-FFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHE 724

Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
           AY+LI  MP E D    W +LLG C  H N+E+GEIAA+ L  LEP+ + +YVLL+N+++
Sbjct: 725 AYELIKKMPVECDSV-LWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHA 783

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
            A+ W     VR  MK+ G+ K PGCSWIE  +EIH FLA D SH+++E+++  L+ L+ 
Sbjct: 784 YARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLAL 843

Query: 785 RMR 787
            M+
Sbjct: 844 HMK 846



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 193/715 (26%), Positives = 305/715 (42%), Gaps = 138/715 (19%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   L        F EA L +  +    ++ D F FP V KA +G+  + LG+Q+
Sbjct: 123 RNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQL 182

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H  V+K+ + L ++ V+N L++MYGKCGS + D  KV  ++ E+D V+WNS+I      G
Sbjct: 183 HGLVIKFRFCL-NIYVSNALIDMYGKCGS-LDDAKKVLVKMPERDSVTWNSVITACAANG 240

Query: 160 -----------------------KWDLAL----------EAFRMMLYSNVE---PSSFTL 183
                                   W   +          EA  M+    VE   P++ TL
Sbjct: 241 MVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTL 300

Query: 184 VSVALACSNLSRRDGLRLGRQVHG--------------NSL-----RVGEW--------- 215
             V  AC+ L R D   LG+Q+HG              N+L     R G+          
Sbjct: 301 AGVLPACARLQRLD---LGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLK 357

Query: 216 ----NTFIMNALMAMYAKLGRVDDAKTLFKSFE----DRDLVSWNTIVSSLSQNDKFLEA 267
               N    N ++  Y + G V  AK LF   +    +R L+SWN+I+S   +N  F EA
Sbjct: 358 FSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEA 417

Query: 268 V-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALV 326
             MF   +   GI+PD  ++ SVL AC+    L  GKEIHA A+   +  D +FVG ALV
Sbjct: 418 FSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSD-TFVGGALV 476

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME--------- 377
           +MY  C+++   +  FD + +K +  WNA+I+GY ++   E    L  KM+         
Sbjct: 477 EMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIY 536

Query: 378 -------------------------EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
                                    +++ L P+  T+  ++PAC R       +  H H+
Sbjct: 537 TWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHS 596

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK G   D ++  AL+DMY++ G ++ ++  +D +   + VS N M+T    C  HG   
Sbjct: 597 IKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTA---CAMHGHGE 653

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
             +   Q M                L   P+ +T ++VL  C  + ++  G E       
Sbjct: 654 EGISLFQTM--------------LALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGY 699

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE 591
             +   +   +++VD+ ++ G L+ A  +   MPV  + + W  ++     HG  +    
Sbjct: 700 YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIE---- 755

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
            L  + AE  R  E++PN      L A           +     M  D G+  SP
Sbjct: 756 -LGEIAAE--RLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSP 807



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 240/494 (48%), Gaps = 63/494 (12%)

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           +LG+QVH ++++ G + + FI   L+ MYA+ G + DA  LF++   R+L SW  I+S  
Sbjct: 76  KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVY 135

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
             +  F EA +  + +   G++ D      V  ACS L  ++ G+++H   ++    + N
Sbjct: 136 LDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCL-N 194

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT-------------------- 358
            +V +AL+DMY  C  ++  ++V   + ++    WN++IT                    
Sbjct: 195 IYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKS 254

Query: 359 ----------------GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
                           G+ QN YDEEA+ +  +M +V GL PNA T++ V+PAC R +  
Sbjct: 255 LDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRM-QVEGLVPNAQTLAGVLPACARLQRL 313

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              + +HG+  +     +  V NAL+D+Y R G +  +  IF    V++ +S NTMI GY
Sbjct: 314 DLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGY 373

Query: 463 TICGQHGDALMLLREMQNMEEEKN------------RNNVYDLDETVLRP-------KPN 503
              G    A  L   M  +  E+             RN ++D   ++ +        +P+
Sbjct: 374 CESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPD 433

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           S TL +VL  C    +L +GKEIHA AI   L +D  VG ALV+MY+KC  L  A+  FD
Sbjct: 434 SFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFD 493

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            +  ++V TWN +I  Y    + + +  LL+ M  +G       PN  T+ ++ A    +
Sbjct: 494 EVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYH-----PNIYTWNSILAGLVEN 548

Query: 624 GMVSEGMDLFYKMK 637
             +   M LF +M+
Sbjct: 549 RQLDLTMQLFSEMQ 562



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 225/483 (46%), Gaps = 44/483 (9%)

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           ASVL +C   ++   GK++HA+ ++     D  F+ + L+ MY  C  ++    +F+ + 
Sbjct: 66  ASVLDSCKCPKL---GKQVHAHTIKTGFDAD-GFIDTKLLQMYARCGLLKDADFLFETMP 121

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
            + +  W A+++ Y  +   EEA +LF ++ +  G+  +      V  AC    +     
Sbjct: 122 MRNLHSWKAILSVYLDHGLFEEAFLLF-QVLQFDGVELDFFVFPLVFKACSGLGSVELGR 180

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +HG  IK     + YV NAL+DMY + G ++ +K +   M  RD+V+WN++IT     G
Sbjct: 181 QLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANG 240

Query: 467 QHGDALMLLREMQNMEEEKNR------------NNVYDLD--ETVLRPK-----PNSITL 507
              +AL  L +M++++                  N YD +  E + R +     PN+ TL
Sbjct: 241 MVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTL 300

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
             VLP C  L  L  GK++H Y  R+   ++ VV +ALVD+Y +CG +  A ++F    V
Sbjct: 301 AGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSV 360

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           +NV++ N +I+ Y   G+  +  EL   M   G   G +  N +      +    + M  
Sbjct: 361 KNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSI-----ISGYVRNFMFD 415

Query: 628 EGMDLFYKMKDDYGIEPSPDHY-------ACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
           E   +F  M  + GIE  PD +       AC   +  R GK   A  ++  +  +    G
Sbjct: 416 EAFSMFQNMLMEEGIE--PDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGG 473

Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
           A   +   C   Q++   ++A     ++E DV +   L+S    S Q+ ++   + +KMK
Sbjct: 474 ALVEMYSKC---QDLTAAQVAFDE--VMEKDVPTWNALISGYTRSNQI-ERIQYLLEKMK 527

Query: 741 EMG 743
             G
Sbjct: 528 GDG 530


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/590 (37%), Positives = 340/590 (57%), Gaps = 46/590 (7%)

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
           C     L  G+++HA  +         ++ + LV MY  C  +E  R V D + ++ +  
Sbjct: 45  CVERRALREGRQVHARMVAAGYR-PALYLATRLVIMYARCGALEDARNVLDGMPERNVVS 103

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           W AMI+GY QNE  ++A  LFI M                    +R+     K+ +H  A
Sbjct: 104 WTAMISGYSQNERPDQAWELFIMM--------------------LRAGIHQVKQ-VHAFA 142

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           +K       +V ++L+DMY++   I+ ++ +FD +  RD VS+  +++GYT  G   +AL
Sbjct: 143 VKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEAL 202

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L R + N   + N+                 +T   +L     LS++  GK++H   +R
Sbjct: 203 DLFRLLYNEGMQCNQ-----------------VTFTALLNALSGLSSMDYGKQVHGLILR 245

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
             L   + + ++L+DMY+KCG L ++RRVFD MP R+V++WN ++M YG HG   EV++L
Sbjct: 246 RELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQL 305

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
            ++M        EVKP+ VT +A+ +  SH G+V EG+D+F  +  +     + +HY CV
Sbjct: 306 FRSMC------DEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCV 359

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           +DLLGR+G+++ A  LI  MP +  +A  W SLLGACR+H NV +GE  AQ L  +EP+ 
Sbjct: 360 IDLLGRSGQLQKALNLIEKMPFQPTRA-IWGSLLGACRVHTNVHVGEFVAQKLLDIEPEN 418

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           A +YV+LSNIY++A +W     VRK M +  V KEPG SW+     IH F + +  H + 
Sbjct: 419 AGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRK 478

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
           E ++  ++ +   ++  G+VPD SCVLH+V++E+KE +L GHSEKLAI FG+++TP   T
Sbjct: 479 EDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLT 538

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           I+V KNLR+C DCH   KF+SK+  REI LRD  RFH    G C+CGDYW
Sbjct: 539 IQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 37/370 (10%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+Q+HA +V  GY   ++ +A  LV MY +CG+ + D   V D + E++ VSW +MI+  
Sbjct: 54  GRQVHARMVAAGYR-PALYLATRLVIMYARCGA-LEDARNVLDGMPERNVVSWTAMISGY 111

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +  + D A E F MML                       R G+   +QVH  +++   E
Sbjct: 112 SQNERPDQAWELFIMML-----------------------RAGIHQVKQVHAFAVKTNFE 148

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + F+ ++L+ MYAK   + +A+ +F     RD+VS+  I+S  +Q     EA+   R +
Sbjct: 149 LHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLL 208

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G++ + V+  ++L A S L  +D GK++H   LR ++    +   S L+DMY  C +
Sbjct: 209 YNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNS-LIDMYSKCGK 267

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVV 393
           +   RRVFD + ++ +  WNAM+ GYG++    E + LF  M +EV    P++ T+ +V+
Sbjct: 268 LLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVK---PDSVTLLAVL 324

Query: 394 PACVRSEAFPDKEGIHGHAIK---LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
                     +   +  H +K     L  + Y    ++D+  R G+++ +  + + M  +
Sbjct: 325 SGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHY--GCVIDLLGRSGQLQKALNLIEKMPFQ 382

Query: 451 DTVS-WNTMI 459
            T + W +++
Sbjct: 383 PTRAIWGSLL 392



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 159/349 (45%), Gaps = 57/349 (16%)

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
           +  CV   A  +   +H   +  G     Y+   L+ MY+R G +E ++ + D M  R+ 
Sbjct: 42  ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNV 101

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VSW  MI+GY+                   + +  +  ++L   +LR   + +       
Sbjct: 102 VSWTAMISGYS-------------------QNERPDQAWELFIMMLRAGIHQV------- 135

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
                      K++HA+A++      + VGS+L+DMYAK   +  ARRVFD++P R+V++
Sbjct: 136 -----------KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVS 184

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----HSGMVS 627
           +  I+  Y   G  +E L+L + +  EG     ++ N+VTF AL  A S       G   
Sbjct: 185 YTAILSGYTQLGLDEEALDLFRLLYNEG-----MQCNQVTFTALLNALSGLSSMDYGKQV 239

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS-LL 686
            G+ L  ++     ++ S      ++D+  + GK+  + ++ + MP       +W++ L+
Sbjct: 240 HGLILRRELPFFMALQNS------LIDMYSKCGKLLYSRRVFDSMPER--SVVSWNAMLM 291

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
           G  R     E+ ++       ++PD  +   +LS  YS   L D+ +D+
Sbjct: 292 GYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSG-YSHGGLVDEGLDM 339



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  +  +    +Q +   F A+L A++G+  +  GKQ+H  +++       + + N+L
Sbjct: 200 EALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPF-FMALQNSL 258

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MY KCG  ++   +VFD + E+  VSWN+M+    R G     ++ FR M    V+P 
Sbjct: 259 IDMYSKCGKLLYS-RRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMC-DEVKPD 316

Query: 180 SFTLVSV 186
           S TL++V
Sbjct: 317 SVTLLAV 323


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/680 (35%), Positives = 388/680 (57%), Gaps = 40/680 (5%)

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           E N F  N ++  YAK  ++  A+ LF      D VS+NT++S  +   +   A++  ++
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M   G + DG +++ ++ AC   + +D  K++H +++        S V +A V  Y    
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGG-FDSYSSVNNAFVTYYSKGG 187

Query: 334 EVECGRRVF---DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            +     VF   D + D+    WN+MI  YGQ++   +AL L+ +M    G   +  T++
Sbjct: 188 LLREAVSVFYGMDELRDE--VSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLA 244

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE---ISKTIFDDM 447
           SV+ A    +        HG  IK G  ++ +V + L+D YS+ G  +    S+ +F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304

Query: 448 EVRDTVSWNTMITGYTICGQHGD-ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              D V WNTMI+GY++  +  + A+   R+MQ +                   +P+  +
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-----------------RPDDCS 347

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFDLM 565
            + V   C  LS+ ++ K+IH  AI++ + ++ + V +AL+ +Y K G L  AR VFD M
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  N +++N +I  Y  HG G E L L + M+  G     + PN++TF+A+ +AC+H G 
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-----IAPNKITFVAVLSACAHCGK 462

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
           V EG + F  MK+ + IEP  +HY+C++DLLGRAGK+E+A + I+ MP +   + AW++L
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK-PGSVAWAAL 521

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           LGACR H+N+ + E AA  L +++P  A+ YV+L+N+Y+ A+ W++   VRK M+   +R
Sbjct: 522 LGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           K+PGCSWIE   + H F+A D SH    +++ +LE + ++M+K GYV D    +   +E 
Sbjct: 582 KKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEA 641

Query: 806 EKETL---LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            +      L  HSEKLA+AFG+++T  G  + V KNLR+C DCH A KF+S +  REII+
Sbjct: 642 GEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIV 701

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFH FK+G CSCGDYW
Sbjct: 702 RDNLRFHCFKDGKCSCGDYW 721



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 253/541 (46%), Gaps = 67/541 (12%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--------------- 127
           +LK+VA  +DL  GK +HA  VK     SS  ++N  VN+Y KCG               
Sbjct: 15  LLKSVAE-RDLFTGKSLHALYVK-SIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72

Query: 128 ---------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
                          S +    ++FD I + D VS+N++I+      +   A+  F+ M 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAKL 230
               E   FTL  +  AC      D + L +Q+H  S+  G ++++  + NA +  Y+K 
Sbjct: 133 KLGFEVDGFTLSGLIAACC-----DRVDLIKQLHCFSVS-GGFDSYSSVNNAFVTYYSKG 186

Query: 231 GRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
           G + +A ++F   ++ RD VSWN+++ +  Q+ +  +A+   ++M  +G K D  ++ASV
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC---GRRVFDFIS 346
           L A + L+ L  G++ H   ++      NS VGS L+D Y  C   +      +VF  I 
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305

Query: 347 DKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
              + +WN MI+GY  N E  EEA+  F +M+ + G  P+  +   V  AC    +    
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQC 364

Query: 406 EGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           + IHG AIK  +  +R  V NAL+ +Y + G ++ ++ +FD M   + VS+N MI GY  
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G   +AL+L + M              LD  +    PN IT + VL  C     + +G+
Sbjct: 425 HGHGTEALLLYQRM--------------LDSGI---APNKITFVAVLSACAHCGKVDEGQ 467

Query: 525 EIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGM 582
           E          +  +    S ++D+  + G L  A R  D MP +   + W  ++ A   
Sbjct: 468 EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527

Query: 583 H 583
           H
Sbjct: 528 H 528



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 208/426 (48%), Gaps = 23/426 (5%)

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A++ +  M +   + D F    ++ A     DL   KQ+H   V  G+  S  +V N  V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFD-SYSSVNNAFV 180

Query: 121 NMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
             Y K G  + +   VF  + E +D+VSWNSMI    +  +   AL  ++ M++   +  
Sbjct: 181 TYYSK-GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD---D 235
            FTL SV  A ++L   D L  GRQ HG  ++ G   N+ + + L+  Y+K G  D   D
Sbjct: 240 MFTLASVLNALTSL---DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACS 294
           ++ +F+     DLV WNT++S  S N++   EAV   RQM   G +PD  S   V  ACS
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +L      K+IH  A+++ I  +   V +AL+ +Y     ++  R VFD + +     +N
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE---GIHGH 411
            MI GY Q+ +  EAL+L+ +M + +G+ PN  T  +V+ AC       + +        
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLD-SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
             K+    + Y  + ++D+  R G++E ++   D M  +  +V+W  ++     C +H +
Sbjct: 476 TFKIEPEAEHY--SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA---CRKHKN 530

Query: 471 ALMLLR 476
             +  R
Sbjct: 531 MALAER 536



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 52/252 (20%)

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR------ 436
           W   T    ++ +    + F  K  +H   +K  +    Y+ N  +++YS+ GR      
Sbjct: 6   WKFKTFRDLLLKSVAERDLFTGKS-LHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64

Query: 437 -------------------------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
                                    I I++ +FD++   DTVS+NT+I+GY    +   A
Sbjct: 65  AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           ++L + M+ +  E                  +  TL  ++  C     L   K++H +++
Sbjct: 125 MVLFKRMRKLGFE-----------------VDGFTLSGLIAACCDRVDLI--KQLHCFSV 165

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVL 590
                +   V +A V  Y+K G L  A  VF  M  +R+ ++WN +I+AYG H EG + L
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225

Query: 591 ELLKNMVAEGSR 602
            L K M+ +G +
Sbjct: 226 ALYKEMIFKGFK 237



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 46/239 (19%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+ S+ +M R   +PD+ +F  V  A + +   S  KQIH   +K     + ++V N L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +++Y K G ++ D   VFDR+ E + VS+N MI    + G    AL  ++ ML S + P+
Sbjct: 388 ISLYYKSG-NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
             T V+V  AC                                     A  G+VD+ +  
Sbjct: 447 KITFVAVLSAC-------------------------------------AHCGKVDEGQEY 469

Query: 240 FKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
           F + ++   +      ++ ++  L +  K  EA  F+  M     KP  V+ A++L AC
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVAWAALLGAC 525



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GK +HA  +++++A+   + +  V++Y+KCG L++AR  F      NV ++NVI+ A
Sbjct: 24  LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
           Y    +     +L   +          +P+ V++  L +  + +      M LF +M+
Sbjct: 84  YAKDSKIHIARQLFDEI---------PQPDTVSYNTLISGYADARETFAAMVLFKRMR 132


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 275/794 (34%), Positives = 431/794 (54%), Gaps = 42/794 (5%)

Query: 73   IQPDNFAFPAVLKAVAGIQDLSLG--KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG-SD 129
             +P+ + F +++       D  L   +Q+ A V K G+ L  + V++ LV+ + + G +D
Sbjct: 276  FKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGF-LQDLYVSSALVSGFARFGLTD 334

Query: 130  MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
              D   +F+++  ++ VS N ++  L +  + + A + F  M    V  +S + V +  A
Sbjct: 335  --DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSA 391

Query: 190  CSNLS-RRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
             S  S   +G R GR+VH + +R G  +    I N L+ MYAK G + DA ++F+   ++
Sbjct: 392  FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 451

Query: 247  DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
            D VSWN+++S L QN+   +A     +M   G  P   ++ S L +C+ L  +  G++IH
Sbjct: 452  DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 511

Query: 307  AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
               L+  +  D S V +AL+ +Y          +VF  + +     WN++I     +E  
Sbjct: 512  CDGLKLGLDTDVS-VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 570

Query: 367  -EEALMLFIKMEEVAGLWP-NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
              +A+  F++M  + G W  +  T  +++ A            IH   +K  L  D  + 
Sbjct: 571  VSQAVKYFLQM--MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 628

Query: 425  NALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            NAL+  Y + G +   + IF  M E RD VSWN+MI+GY     H + L    ++     
Sbjct: 629  NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI----HNELLHKAMDLVWFMM 684

Query: 484  EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
            +K +             + +S T  T+L  C +++ L +G E+HA  IR  L +DVVVGS
Sbjct: 685  QKGQ-------------RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGS 731

Query: 544  ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
            ALVDMY+KCG +++A R F+LMP+RNV +WN +I  Y  HG G++ L+L   M+ +G   
Sbjct: 732  ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ-- 789

Query: 604  GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
                P+ VTF+ + +ACSH G V EG + F  M + Y + P  +H++C+VDLLGRAGK++
Sbjct: 790  ---PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 846

Query: 664  DAYQLINMMPPEFDKAGAWSSLLGAC-RIH-QNVEIGEIAAQNLFLLEPDVASHYVLLSN 721
            +    IN MP +      W ++LGAC R + +N E+G  AA+ L  LEP  A +YVLL+N
Sbjct: 847  EVGDFINSMPMK-PNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 905

Query: 722  IYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLEN 781
            +Y+S + W+     R  MKE  V+KE GCSW+   D +H F+AGD  H + + ++  L  
Sbjct: 906  MYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRE 965

Query: 782  LSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
            L+ +MR  GY+P T   L ++  E KE LL  HSEK+A+AF +L       IR+ KNLRV
Sbjct: 966  LNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRV 1024

Query: 842  CNDCHQATKFISKI 855
            C DCH A  +ISKI
Sbjct: 1025 CGDCHSAFGYISKI 1038



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 176/651 (27%), Positives = 307/651 (47%), Gaps = 44/651 (6%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAV--AGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           EA   + +M R+   P+++AF + L+A   +G     LG QIH  + K  YG S V V N
Sbjct: 155 EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG-SDVVVCN 213

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM----LY 173
            L++MYG C     D   VFD I  ++ +SWNS+I+   R G    A + F  M    L 
Sbjct: 214 VLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLG 273

Query: 174 SNVEPSSFTLVS-VALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLG 231
            + +P+ +T  S +  ACS++    GL +  Q+     + G   + ++ +AL++ +A+ G
Sbjct: 274 FSFKPNEYTFGSLITTACSSVDF--GLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFG 331

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKPDGVSIASVL 290
             DDAK +F+    R++VS N ++  L +  +   A     +M  L GI  D  S   +L
Sbjct: 332 LTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLL 389

Query: 291 PACSHLEMLD----TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            A S   +L+     G+E+HA+ +R  +  +   +G+ LV+MY     +     VF+ + 
Sbjct: 390 SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 449

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K    WN++I+G  QNE  E+A   F +M     + P+  T+ S + +C         E
Sbjct: 450 EKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM-PSNFTLISTLSSCASLGWIMLGE 508

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            IH   +KLGL  D  V NAL+ +Y+  G       +F  M   D VSWN++I       
Sbjct: 509 QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA----- 563

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
                      + + E   ++   Y L         + +T + +L    +LS      +I
Sbjct: 564 -----------LSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 612

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGE 585
           HA  ++  L+ D  +G+AL+  Y KCG +N   ++F  M   R+ ++WN +I  Y  +  
Sbjct: 613 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 672

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             + ++L+  M+ +G R      +  TF  + +AC+    +  GM++ +       +E  
Sbjct: 673 LHKAMDLVWFMMQKGQR-----LDSFTFATILSACASVATLERGMEV-HACGIRACLESD 726

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
               + +VD+  + G+++ A +   +MP       +W+S++     H + E
Sbjct: 727 VVVGSALVDMYSKCGRIDYASRFFELMP--LRNVYSWNSMISGYARHGHGE 775



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/612 (26%), Positives = 300/612 (49%), Gaps = 54/612 (8%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            +++H   +KYG+ + ++ ++NTL+N+Y + G D+    K+FD ++ ++ V+W  +I+  
Sbjct: 90  ARELHLQSIKYGF-VGNLFLSNTLINIYVRIG-DLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG--NSLRVG 213
            + GK D A   FR M+ +   P+ +   S   AC   S   G +LG Q+HG  +  R G
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGCKLGVQIHGLISKTRYG 206

Query: 214 EWNTFIMNALMAMYAK-LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
             +  + N L++MY   L   +DA+++F     R+ +SWN+I+S  S+    + A     
Sbjct: 207 S-DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 265

Query: 273 QMALRGI----KPDGVSIASVL-PACSHLEM-LDTGKEIHAYALRNDILIDNSFVGSALV 326
            M   G+    KP+  +  S++  ACS ++  L   +++ A   ++  L D  +V SALV
Sbjct: 266 SMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQD-LYVSSALV 324

Query: 327 DMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
             +      +  + +F+ +  + +   N ++ G  + +  E A  +F +M+++ G+  ++
Sbjct: 325 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS 384

Query: 387 --TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTI 443
               +S+     V  E       +H H I+ GL  ++  + N L++MY++ G I  + ++
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 444

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           F+ M  +D+VSWN++I+G                 QN   E    + + +  T     P+
Sbjct: 445 FELMVEKDSVSWNSLISGLD---------------QNECSEDAAESFHRMRRT--GSMPS 487

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
           + TL++ L  C +L  +  G++IH   ++  L TDV V +AL+ +YA+ GC     +VF 
Sbjct: 488 NFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFS 547

Query: 564 LMPVRNVITWNVIIMAY--GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           LMP  + ++WN +I A         Q V   L+ M     RGG    + VTFI + +A S
Sbjct: 548 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM-----RGG-WGLSRVTFINILSAVS 601

Query: 622 HSGM--VS---EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
              +  VS     + L Y + DD  I  +      ++   G+ G++ +  ++   M    
Sbjct: 602 SLSLHEVSHQIHALVLKYCLSDDTAIGNA------LLSCYGKCGEMNECEKIFARMSETR 655

Query: 677 DKAGAWSSLLGA 688
           D+  +W+S++  
Sbjct: 656 DEV-SWNSMISG 666



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 26/246 (10%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L+ ++ T  S++     S    +   +H  +IK G   + ++ N L+++Y R+G +  ++
Sbjct: 67  LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 126

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD+M  R+ V+W  +I+GYT  G+  +A    R+M                   +R  
Sbjct: 127 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM-------------------VRAG 167

Query: 502 --PNSITLMTVLPGC--GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC-GCLN 556
             PN     + L  C     S    G +IH    +    +DVVV + L+ MY  C    N
Sbjct: 168 FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSAN 227

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            AR VFD + +RN I+WN II  Y   G+     +L  +M  EG  G   KPNE TF +L
Sbjct: 228 DARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEG-LGFSFKPNEYTFGSL 286

Query: 617 F-AACS 621
              ACS
Sbjct: 287 ITTACS 292



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S+TR + SW   +     +    +A+     M +   + D+F F  +L A A +  L  G
Sbjct: 652 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 711

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            ++HA  ++     S V V + LV+MY KCG   +   + F+ +  ++  SWNSMI+   
Sbjct: 712 MEVHACGIRACLE-SDVVVGSALVDMYSKCGRIDY-ASRFFELMPLRNVYSWNSMISGYA 769

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           R G  + AL+ F  M+     P   T V V  ACS++
Sbjct: 770 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 806



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           + +E+H  +I+     ++ + + L+++Y + G L  A+++FD M  RN++TW  +I  Y 
Sbjct: 89  EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 148

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
            +G+  E     ++MV    R G + PN   F +   AC  SG
Sbjct: 149 QNGKPDEACARFRDMV----RAGFI-PNHYAFGSALRACQESG 186


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/555 (40%), Positives = 320/555 (57%), Gaps = 22/555 (3%)

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW-PNATTMSSVVPACVRSEAF 402
           F+S   I  +NA++  + Q+      +  F     +     P+  T +SV+ AC      
Sbjct: 84  FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQV 143

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + + +H    K G   + +V+N+L+D+Y ++G   I++ +FD+M VRD VSWNT+I+GY
Sbjct: 144 LEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY 203

Query: 463 TICGQHGDALMLLREM--------QNMEEEKNRNNVYDLDETVLRP-------KPNSITL 507
              G    A M+   M          M     RN  Y     + R         PN +TL
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTL 263

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           ++VL  C  L AL  GK IH +  RN +   + +G+AL DMYAKCGC+  A+ VF  M  
Sbjct: 264 VSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHE 323

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+VI+W++IIM   M+G   E       M+ +G     ++PN+++F+ L  AC+H+G+V 
Sbjct: 324 RDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG-----LEPNDISFMGLLTACTHAGLVD 378

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           +G++ F  M   YGI P  +HY CVVDLL RAG+++ A  LIN MP +      W +LLG
Sbjct: 379 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQ-PNVIVWGALLG 437

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
            CRI+++ E GE     +  L+ + +   V L+N+Y+S    D A   R +M++    K 
Sbjct: 438 GCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKT 497

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
           PGCSWIE  + +++F  GD SH QS +++  +  L  +M+  GY P T  V+HN++EEEK
Sbjct: 498 PGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEK 557

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           E  L  HSEKLA+AFG++NT  GTTIR+ KNLRVCNDCH A K ISKI  REI++RD  R
Sbjct: 558 EDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSR 617

Query: 868 FHHFKNGTCSCGDYW 882
           FHHFK+G CSC DYW
Sbjct: 618 FHHFKDGKCSCNDYW 632



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 137/263 (52%), Gaps = 36/263 (13%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY---------- 123
            PD + F +VLKA AG+  +  G+++H  V KYG   S++ V N+LV++Y          
Sbjct: 124 NPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCE-SNLFVRNSLVDLYFKVGCNCIAQ 182

Query: 124 -------------------GKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDL 163
                              G C S M D  + VFD + EK+ VSW++MI+   R  K+  
Sbjct: 183 KLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYAD 242

Query: 164 ALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMN 221
           A+E FR M +   + P+  TLVSV  AC++L   D G  + R +  N + VG    F+ N
Sbjct: 243 AIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVG---LFLGN 299

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           AL  MYAK G V +AK +F    +RD++SW+ I+  L+      EA  F  +M   G++P
Sbjct: 300 ALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP 359

Query: 282 DGVSIASVLPACSHLEMLDTGKE 304
           + +S   +L AC+H  ++D G E
Sbjct: 360 NDISFMGLLTACTHAGLVDKGLE 382



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 57/368 (15%)

Query: 147 SWNSMIATLCRFGKWDLALEAF--RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           ++N+++    +   W   +  F  +++L +   P  +T  SV  AC+ L++   +  G++
Sbjct: 92  AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQ---VLEGQK 148

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI--------- 254
           VH    + G E N F+ N+L+ +Y K+G    A+ LF     RD+VSWNT+         
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 255 ----------------------VSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLP 291
                                 +S  ++N+K+ +A+   RQM    G+ P+ V++ SVL 
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           AC+HL  LD GK IH +  RN I +   F+G+AL DMY  C  V   + VF  + ++ + 
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEV-GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVI 327

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPD 404
            W+ +I G     Y  EA   F +M E  GL PN  +   ++ AC  +       E F  
Sbjct: 328 SWSIIIMGLAMYGYANEAFNFFAEMIE-DGLEPNDISFMGLLTACTHAGLVDKGLEYFDM 386

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYT 463
              ++G   K+    + Y    ++D+ SR GR++ ++++ + M ++ + + W  ++ G  
Sbjct: 387 MPQVYGITPKI----EHY--GCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG-- 438

Query: 464 ICGQHGDA 471
            C  + DA
Sbjct: 439 -CRIYKDA 445



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 178/381 (46%), Gaps = 71/381 (18%)

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR-QMAL-RGIKPDGVSIASVLPACSHLE 297
           F SF +  + ++N ++ + SQ++ +   + +   Q+ L     PD  +  SVL AC+ L 
Sbjct: 84  FLSFPN--IFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA 141

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMY----CNC-----------REV------- 335
            +  G+++H +  +      N FV ++LVD+Y    CNC           R+V       
Sbjct: 142 QVLEGQKVHCFVTKYGCE-SNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLI 200

Query: 336 ---------ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
                    +  R VFD + +K +  W+ MI+GY +NE   +A+ LF +M+   GL PN 
Sbjct: 201 SGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPND 260

Query: 387 TTMSSVVPACVRSEAFPDKEGIH----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            T+ SV+ AC    A    + IH     + I++GL    ++ NAL DMY++ G +  +K 
Sbjct: 261 VTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGL----FLGNALADMYAKCGCVLEAKG 316

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +F +M  RD +SW+ +I G  + G   +A     EM              +++ +   +P
Sbjct: 317 VFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEM--------------IEDGL---EP 359

Query: 503 NSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
           N I+ M +L  C     + KG E        Y I       +     +VD+ ++ G L+ 
Sbjct: 360 NDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI----TPKIEHYGCVVDLLSRAGRLDQ 415

Query: 558 ARRVFDLMPVR-NVITWNVII 577
           A  + + MP++ NVI W  ++
Sbjct: 416 AESLINSMPMQPNVIVWGALL 436



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 109/218 (50%), Gaps = 13/218 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   +   AR+ ++ +AI  + +M     + P++    +VL A A +  L LGK IH  
Sbjct: 226 SWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRF 285

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           + +    +  + + N L +MY KCG  + +   VF  + E+D +SW+ +I  L  +G  +
Sbjct: 286 IRRNKIEV-GLFLGNALADMYAKCGCVL-EAKGVFHEMHERDVISWSIIIMGLAMYGYAN 343

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLR---LGRQVHGNSLRVGEWNTF 218
            A   F  M+   +EP+  + + +  AC++    D GL    +  QV+G + ++  +   
Sbjct: 344 EAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY--- 400

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIV 255
               ++ + ++ GR+D A++L  S   + +++ W  ++
Sbjct: 401 --GCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALL 436


>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
          Length = 695

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/613 (38%), Positives = 345/613 (56%), Gaps = 41/613 (6%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFD 343
           I S+   CS +  L   K++HA+ LR     + +  F+   ++ +  +  +V    RVFD
Sbjct: 108 IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 164

Query: 344 FISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            I +    +WN +I     +    EEA ML+ KM E     P+  T   V+ AC     F
Sbjct: 165 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 224

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + + +H   +K G G D YV N L+ +Y   G +++++ +FD+M  R  VSWN+MI   
Sbjct: 225 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 284

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G++  AL L REMQ   E                  P+  T+ +VL  C  L +L+ 
Sbjct: 285 VRFGEYDSALQLFREMQRSFE------------------PDGYTMQSVLSACAGLGSLSL 326

Query: 523 GKEIHAYAIRNM---LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           G   HA+ +R     +A DV+V ++L++MY KCG L  A +VF  M  R++ +WN +I+ 
Sbjct: 327 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 386

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           +  HG  +E +     MV    +   V+PN VTF+ L  AC+H G V++G   F  M  D
Sbjct: 387 FATHGRAEEAMNFFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 443

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIHQNVEIG 698
           Y IEP+ +HY C+VDL+ RAG + +A  ++  MP + D A  W SLL AC +   +VE+ 
Sbjct: 444 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD-AVIWRSLLDACCKKGASVELS 502

Query: 699 EIAAQNLFLLEPDVASH-------YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           E  A+N+   + D  S        YVLLS +Y+SA  W+    VRK M E G+RKEPGCS
Sbjct: 503 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 562

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS--CVLHNVNEEEKET 809
            IE     H+F AGD SH Q++Q++  L+ + +R+R  GY+PD S   ++   N+  KE 
Sbjct: 563 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 622

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            L  HSE+LAIAFG++N PP T IR+ KNLRVCNDCH+ TK ISK+ + EII+RD  RFH
Sbjct: 623 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 682

Query: 870 HFKNGTCSCGDYW 882
           HFK+G+CSC DYW
Sbjct: 683 HFKDGSCSCLDYW 695



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 15/261 (5%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA + Y +M  R +  PD   FP VLKA A I   S GKQ+H  +VK+G+G   V V N 
Sbjct: 190 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNG 248

Query: 119 LVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+++YG CG  D+    KVFD + E+  VSWNSMI  L RFG++D AL+ FR M  S  E
Sbjct: 249 LIHLYGSCGCLDL--ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FE 305

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIMNALMAMYAKLGRV 233
           P  +T+ SV  AC+ L     L LG   H   LR  +     +  + N+L+ MY K G +
Sbjct: 306 PDGYTMQSVLSACAGLG---SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 362

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLP 291
             A+ +F+  + RDL SWN ++   + + +  EA+ F  +M  +   ++P+ V+   +L 
Sbjct: 363 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 422

Query: 292 ACSHLEMLDTGKEIHAYALRN 312
           AC+H   ++ G++     +R+
Sbjct: 423 ACNHRGFVNKGRQYFDMMVRD 443



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 197/411 (47%), Gaps = 46/411 (11%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK------CGSDMWDVYKVFDRITEKDQ 145
           D+S  KQ+HA  ++  Y     T+      +YGK        SD+   ++VFD I     
Sbjct: 117 DMSQLKQLHAFTLRTTYPEEPATLF-----LYGKILQLSSSFSDVNYAFRVFDSIENHSS 171

Query: 146 VSWNSMIATLCRFGKWDLALEAFRMMLYSNV------EPSSFTLVSVALACSNLSRRDGL 199
             WN++I    R    D++ +    MLY  +       P   T   V  AC+ +    G 
Sbjct: 172 FMWNTLI----RACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF---GF 224

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+QVH   ++ G   + ++ N L+ +Y   G +D A+ +F    +R LVSWN+++ +L
Sbjct: 225 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 284

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN---DIL 315
            +  ++  A+   R+M  R  +PDG ++ SVL AC+ L  L  G   HA+ LR    D+ 
Sbjct: 285 VRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 343

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           +D   V ++L++MYC C  +    +VF  +  + +A WNAMI G+  +   EEA+  F +
Sbjct: 344 MD-VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 402

Query: 376 M-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL------M 428
           M ++   + PN+ T   ++ AC     F +K    G      + RD  ++ AL      +
Sbjct: 403 MVDKRENVRPNSVTFVGLLIAC-NHRGFVNK----GRQYFDMMVRDYCIEPALEHYGCIV 457

Query: 429 DMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
           D+ +R G I  +  +   M ++ D V W +++     C + G ++ L  E+
Sbjct: 458 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEI 505


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/681 (36%), Positives = 383/681 (56%), Gaps = 46/681 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L+  YAK   +  A+ +F      D+VS+NT++++ +   +    +    ++ 
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYAL--RNDILIDNSFVGSALVDMYCN 331
              +  DG +++ V+ AC      D G  +++H + +   +D       V +A++  Y  
Sbjct: 134 ELRLGLDGFTLSGVITACGD----DVGLVRQLHCFVVVCGHDCYAS---VNNAVLACYSR 186

Query: 332 CREVECGRRVFDFISD---KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
              +   RRVF  + +   +    WNAMI   GQ+    EA+ LF +M    GL  +  T
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVR-RGLKVDMFT 245

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR-MGRIEISKTIFDDM 447
           M+SV+ A    +        HG  IK G   + +V + L+D+YS+  G +   + +F+++
Sbjct: 246 MASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI 305

Query: 448 EVRDTVSWNTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
              D V WNTMI+G+++      D L   REMQ       RN            +P+  +
Sbjct: 306 TAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQ-------RNGF----------RPDDCS 348

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFDLM 565
            + V   C  LS+ + GK++HA AI++ +  + V V +ALV MY+KCG ++ ARRVFD M
Sbjct: 349 FVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
           P  N ++ N +I  Y  HG   E L L + M+ +     ++ PN +TFIA+ +AC H+G 
Sbjct: 409 PEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEK-----DIAPNSITFIAVLSACVHTGK 463

Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSS 684
           V EG   F  MK+ + IEP  +HY+C++DLLGRAGK+++A ++I  MP  F+     W++
Sbjct: 464 VEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMP--FNPGSIEWAT 521

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLGACR H NVE+   AA     LEP  A+ YV+LSN+Y+SA  W++A  V++ M+E GV
Sbjct: 522 LLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL---HN 801
           +K+PGCSWIE   ++H F+A D SH   +++H ++  + ++M++ GYVPD    L     
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEE 641

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           V  +E+E  L  HSEKLA+AFG+++T  G  I V KNLR+C DCH A K IS +  REI 
Sbjct: 642 VEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREIT 701

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFH FK G CSC DYW
Sbjct: 702 VRDTHRFHCFKEGHCSCRDYW 722



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 245/497 (49%), Gaps = 40/497 (8%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q   H+ +Y     +V   NTL+N Y K  S +    +VFD I + D VS+N++IA    
Sbjct: 64  QTSFHLTQY----PNVFSYNTLINAYAK-HSLIHIARRVFDEIPQPDIVSYNTLIAAYAD 118

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G+    L  F  +    +    FTL  V  AC      D + L RQ+H   +  G +  
Sbjct: 119 RGECGPTLRLFEEVRELRLGLDGFTLSGVITACG-----DDVGLVRQLHCFVVVCGHDCY 173

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFED---RDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             + NA++A Y++ G + +A+ +F+   +   RD VSWN ++ +  Q+ + +EAV   R+
Sbjct: 174 ASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFRE 233

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC- 332
           M  RG+K D  ++ASVL A + ++ L  G++ H   +++     NS VGS L+D+Y  C 
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSG-FHGNSHVGSGLIDLYSKCA 292

Query: 333 -REVECGRRVFDFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMS 390
              VEC R+VF+ I+   + LWN MI+G+   E   E+ L  F +M+   G  P+  +  
Sbjct: 293 GSMVEC-RKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR-NGFRPDDCSFV 350

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEV 449
            V  AC    +    + +H  AIK  +  +R  V NAL+ MYS+ G +  ++ +FD M  
Sbjct: 351 CVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE 410

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
            +TVS N+MI GY    QHG  +  LR  + M E+       D+        PNSIT + 
Sbjct: 411 HNTVSLNSMIAGY---AQHGVEVESLRLFELMLEK-------DI-------APNSITFIA 453

Query: 510 VLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           VL  C     + +G K  +    R  +  +    S ++D+  + G L  A R+ + MP  
Sbjct: 454 VLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFN 513

Query: 569 -NVITWNVIIMAYGMHG 584
              I W  ++ A   HG
Sbjct: 514 PGSIEWATLLGACRKHG 530



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 142/266 (53%), Gaps = 11/266 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +  +  EA+  + EM R  ++ D F   +VL A   ++DL  G+Q H  +
Sbjct: 210 SWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMM 269

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  +S  V + L+++Y KC   M +  KVF+ IT  D V WN+MI+    +   DL
Sbjct: 270 IKSGFHGNS-HVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYE--DL 326

Query: 164 A---LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTF 218
           +   L  FR M  +   P   + V V  ACSNLS      LG+QVH  +++  V      
Sbjct: 327 SEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS---LGKQVHALAIKSDVPYNRVS 383

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + NAL+AMY+K G V DA+ +F +  + + VS N++++  +Q+   +E++     M  + 
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKD 443

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKE 304
           I P+ ++  +VL AC H   ++ G++
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQK 469



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   +L  C A   L  GK +HA   ++++     + +    +Y+KCG L+ A+  F L 
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
              NV ++N +I AY  H     ++ + + +  E       +P+ V++  L AA +  G 
Sbjct: 71  QYPNVFSYNTLINAYAKHS----LIHIARRVFDEIP-----QPDIVSYNTLIAAYADRGE 121

Query: 626 VSEGMDLFYKMKD 638
               + LF ++++
Sbjct: 122 CGPTLRLFEEVRE 134


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/584 (37%), Positives = 341/584 (58%), Gaps = 26/584 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCRE---VECGRRVFDFISDK-KIALWNAMIT 358
           ++IHA+++R+ + I ++ +G  L+    +      +    +VF  I     + +WN +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
           GY +      A  L+ +M     + P+  T   ++ A          E IH   I+ G G
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
              YVQN+L+ +Y+  G +  +  +FD M  +D V+WN++I G+   G+  +AL L  EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
                  N   +          KP+  T++++L  C  + AL  GK +H Y I+  L  +
Sbjct: 214 -------NSKGI----------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256

Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
           +   + L+D+YA+CG +  A+ +FD M  +N ++W  +I+   ++G G+E +EL K M  
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM-- 314

Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
           E + G  + P E+TF+ +  ACSH GMV EG + F +M+++Y IEP  +H+ C+VDLL R
Sbjct: 315 ESTEG--LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372

Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
           AG+V+ AY+ I  MP +      W +LLGAC +H + ++ E A   +  LEP+ +  YVL
Sbjct: 373 AGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431

Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
           LSN+Y+S Q W     +RK+M   GV+K PG S +E G+ +H+FL GD SH QS+ ++  
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491

Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
           L+ ++ R+R EGYVP  S V  +V EEEKE  +  HSEK+AIAF +++TP  + I V KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551

Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           LRVC DCH A K +SK+ +REI++RD  RFHHFKNG+CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 205/415 (49%), Gaps = 19/415 (4%)

Query: 89  GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQV 146
           G+  ++  +QIHA  +++G  +S   +   L+       S   M   +KVF +I +   V
Sbjct: 26  GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85

Query: 147 S-WNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
             WN++I      G    A   +R M  S  VEP + T   +  A + ++    +RLG  
Sbjct: 86  FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA---DVRLGET 142

Query: 205 VHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +H   +R G  +  ++ N+L+ +YA  G V  A  +F    ++DLV+WN++++  ++N K
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
             EA+    +M  +GIKPDG +I S+L AC+ +  L  GK +H Y ++   L  N    +
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLHSSN 261

Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
            L+D+Y  C  VE  + +FD + DK    W ++I G   N + +EA+ LF  ME   GL 
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321

Query: 384 PNATTMSSVVPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEIS 440
           P   T   ++ AC  S     KEG  +   ++     +  +++   ++D+ +R G+++ +
Sbjct: 322 PCEITFVGILYAC--SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379

Query: 441 KTIFDDMEVR-DTVSWNTMITGYTICGQHGDA-LMLLREMQNMEEEKNRNNVYDL 493
                 M ++ + V W T++     C  HGD+ L     +Q ++ E N +  Y L
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGA---CTVHGDSDLAEFARIQILQLEPNHSGDYVL 431



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 29/381 (7%)

Query: 8   LTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE 67
           L  LPSPP         P + A  +     +      W   +R  A       A   Y E
Sbjct: 60  LVSLPSPP---------PMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYRE 110

Query: 68  MTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           M  S  ++PD   +P ++KAV  + D+ LG+ IH+ V++ G+G S + V N+L+++Y  C
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG-SLIYVQNSLLHLYANC 169

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           G D+   YKVFD++ EKD V+WNS+I      GK + AL  +  M    ++P  FT+VS+
Sbjct: 170 G-DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ +     L LG++VH   ++VG   N    N L+ +YA+ GRV++AKTLF    D
Sbjct: 229 LSACAKIG---ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           ++ VSW +++  L+ N    EA+   + M +  G+ P  ++   +L ACSH  M+  G E
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345

Query: 305 IHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFIS----DKKIALWNAMI-- 357
            +   +R +  I+        +VD+     +V   ++ +++I        + +W  ++  
Sbjct: 346 -YFRRMREEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGA 401

Query: 358 -TGYGQNEYDEEALMLFIKME 377
            T +G ++  E A +  +++E
Sbjct: 402 CTVHGDSDLAEFARIQILQLE 422


>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/568 (39%), Positives = 319/568 (56%), Gaps = 58/568 (10%)

Query: 352 LWNAMITGYGQNEYD-----EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           LWN +I  + Q            + +F++M    G+ P+  T   ++ +           
Sbjct: 26  LWNTLIRAHVQARAQPTGPTHSPISIFVRMR-FHGVQPDFHTFPFLLQSFASPSLLHLGR 84

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD-------------------- 446
            +H   ++ GL  D +VQ +L+ MYS  G +  ++ +FD+                    
Sbjct: 85  SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144

Query: 447 -----------MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
                      M  R+ +SW+ MI GY  CGQ+ +AL L REMQ +      N+V     
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQML----GVNDV----- 195

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
                +PN  T+  VL  CG L AL  GK  HAY  +  +  DVV+G+AL+DMYAKCG +
Sbjct: 196 -----RPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSV 250

Query: 556 NFARRVF-DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
             A  VF +L P ++V+ W+ +I    MHG  +E + L   M+ +G     V+PN VTF+
Sbjct: 251 EKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG-----VRPNAVTFL 305

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           A+F AC H G+VSEG D   +M +DY I P+  HY C+VDL GRAG++++A+ ++  MP 
Sbjct: 306 AVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPM 365

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           E D    W +LL   R+H ++E  E+A + L  LEP  +  YVLLSN+Y+    W+    
Sbjct: 366 EPDVL-VWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRH 424

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           VR  M+ MG++K PGCS IE G  +H+F  GD SH ++ Q+H  LE + ER++ EGYV +
Sbjct: 425 VRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGN 484

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           T  VL +++EE KE  L  HSEKLA+A+G L T PGT IR+ KNLR+C DCH A K ISK
Sbjct: 485 TKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISK 544

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           +  REII+RD  RFHHF  G CSC DYW
Sbjct: 545 VFDREIIVRDCNRFHHFTQGLCSCRDYW 572



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 67/392 (17%)

Query: 251 WNTIVSSLSQ-----NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           WNT++ +  Q            +    +M   G++PD  +   +L + +   +L  G+ +
Sbjct: 27  WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86

Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA---------- 355
           HA  LR  + ID  FV ++L+ MY +C  +   R+VFD I    +  WN+          
Sbjct: 87  HAQILRFGLAID-PFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGL 145

Query: 356 ---------------------MITGYGQNEYDEEALMLF--IKMEEVAGLWPNATTMSSV 392
                                MI GY +    +EAL LF  ++M  V  + PN  TMS V
Sbjct: 146 VDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGV 205

Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRD 451
           + AC R  A    +  H +  K G+  D  +  AL+DMY++ G +E +  +F ++   +D
Sbjct: 206 LAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 265

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            ++W+ MI+G  + G   + + L  +M N                    +PN++T + V 
Sbjct: 266 VMAWSAMISGLAMHGLAEECVGLFSKMINQGV-----------------RPNAVTFLAVF 308

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFDLMP 566
             C     +++GK+     +R M     ++ +      +VD+Y + G +  A  V   MP
Sbjct: 309 CACVHGGLVSEGKDY----LRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 364

Query: 567 VR-NVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +  +V+ W  ++    MHG+ +     LK ++
Sbjct: 365 MEPDVLVWGALLSGSRMHGDIETCELALKKLI 396



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 45/353 (12%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           ++ M    +QPD   FP +L++ A    L LG+ +HA ++++G  +    V  +L++MY 
Sbjct: 52  FVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPF-VQTSLISMYS 110

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNS-------------------------------MIA 153
            CG ++    +VFD I + D  SWNS                               MI 
Sbjct: 111 SCG-NLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMIN 169

Query: 154 TLCRFGKWDLALEAFR---MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
              R G++  AL  FR   M+  ++V P+ FT+  V  AC  L     L  G+  H    
Sbjct: 170 GYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLG---ALEHGKWAHAYID 226

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAV 268
           + G   +  +  AL+ MYAK G V+ A  +F +   ++D+++W+ ++S L+ +    E V
Sbjct: 227 KCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECV 286

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
               +M  +G++P+ V+  +V  AC H  ++  GK+       +  +I        +VD+
Sbjct: 287 GLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDL 346

Query: 329 YCNCREV-ECGRRVFDFISDKKIALWNAMITG---YGQNEYDEEALMLFIKME 377
           Y     + E    V     +  + +W A+++G   +G  E  E AL   I++E
Sbjct: 347 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELE 399


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/719 (34%), Positives = 385/719 (53%), Gaps = 36/719 (5%)

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           +R ML     P  FT   V   C+ L    GL  GR  HG  +++G E + +  N+L+A 
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLG---GLDEGRAAHGMVIKLGLEHDVYTCNSLVAF 151

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGV 284
           YAKLG V+DA+ +F     RD+V+WNT+V     N     A+   ++M  AL  ++ D V
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALE-VQHDSV 210

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
            I + L AC        GKEIH Y +R+ +  D   VG++L+DMYC C EV   R VF  
Sbjct: 211 GIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIK-VGTSLLDMYCKCGEVAYARSVFAT 269

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  WN MI GY  NE  +EA   F++M    GL     T  +++ AC ++E+   
Sbjct: 270 MPLRTVVTWNCMIGGYALNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQTESSLY 328

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              +HG+ ++        ++ AL++MY ++G++E S+ IF  +  +  VSWN MI  Y  
Sbjct: 329 GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMY 388

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
              + +A+ L  E+ N         +Y          P+  T+ TV+P    L +L   +
Sbjct: 389 KEMYTEAITLFLELLN-------QPLY----------PDYFTMSTVVPAFVLLGSLRHCR 431

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IH+Y I    A + ++ +A++ MYA+ G +  +R +FD M  ++VI+WN +IM Y +HG
Sbjct: 432 QIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHG 491

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
           +G+  LE+   M   G     ++PNE TF+++  ACS SG+V EG   F  M  +YG+ P
Sbjct: 492 QGKTALEMFDEMKYNG-----LQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HY C+ DLLGR G + +  Q I  MP +   +  W SLL A R   +++I E AA+ 
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPID-PTSRVWGSLLTASRNQNDIDIAEYAAER 605

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +F LE D    Y++LS++Y+ A  W+    VR  MKE G+R+    S +E       F  
Sbjct: 606 IFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFAN 665

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG-HSEKLAIAFG 823
           GD SH QS  +H     LS ++ +     DT    + V    + T +   HS +LA+ FG
Sbjct: 666 GDMSHSQSRTIHEVSNILSRKIEE---TDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFG 722

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++++  G+ I V KN+R+CN CH A K IS+   R I++ D + +H F +G+C CGDYW
Sbjct: 723 LISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 253/530 (47%), Gaps = 56/530 (10%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS-------------------- 64
           PAT+    P    +    +S + SL +E R ++  EA+ +                    
Sbjct: 27  PATSKEPPPRLPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAG 86

Query: 65  --------YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
                   Y  M     +PD F FP V+K  A +  L  G+  H  V+K G     V   
Sbjct: 87  LPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLE-HDVYTC 145

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-N 175
           N+LV  Y K G  + D  +VFD +  +D V+WN+M+      G   LAL  F+ M  +  
Sbjct: 146 NSLVAFYAKLGL-VEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALE 204

Query: 176 VEPSSFTLV-SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
           V+  S  ++ ++A  C  +S       G+++HG  +R G E +  +  +L+ MY K G V
Sbjct: 205 VQHDSVGIIAALAACCLEVSSMQ----GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEV 260

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+++F +   R +V+WN ++   + N++  EA     QM   G++ + V+  ++L AC
Sbjct: 261 AYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC 320

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           +  E    G+ +H Y +R   L  +  + +AL++MY    +VE   ++F  I++K +  W
Sbjct: 321 AQTESSLYGRSVHGYVVRRQFL-PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSW 379

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N MI  Y   E   EA+ LF+++     L+P+  TMS+VVPA V   +      IH + I
Sbjct: 380 NNMIAAYMYKEMYTEAITLFLELLN-QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
            LG   +  + NA++ MY+R G +  S+ IFD M  +D +SWNTMI GY I GQ   AL 
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALE 498

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           +  EM+        N +          +PN  T ++VL  C     + +G
Sbjct: 499 MFDEMK-------YNGL----------QPNESTFVSVLTACSVSGLVDEG 531



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 27/338 (7%)

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           L N MI G+        AL  +  M E  G  P+  T   VV  C R     +    HG 
Sbjct: 74  LHNVMIRGFADAGLPAGALAAYRGMLE-DGARPDRFTFPVVVKCCARLGGLDEGRAAHGM 132

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            IKLGL  D Y  N+L+  Y+++G +E ++ +FD M VRD V+WNTM+ GY   G    A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLA 192

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L   +EM +                 L  + +S+ ++  L  C    +  +GKEIH Y I
Sbjct: 193 LACFQEMHD----------------ALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVI 236

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+ L  D+ VG++L+DMY KCG + +AR VF  MP+R V+TWN +I  Y ++    E  +
Sbjct: 237 RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFD 296

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA 650
               M AEG     ++   VT I L AAC+ +     G  +  Y ++  +   P      
Sbjct: 297 CFMQMRAEG-----LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF--LPHVVLET 349

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            ++++ G+ GKVE + ++   +  +     +W++++ A
Sbjct: 350 ALLEMYGKVGKVESSEKIFGKIANK--TLVSWNNMIAA 385


>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera]
 gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/600 (38%), Positives = 354/600 (59%), Gaps = 35/600 (5%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR-----RVF 342
           S+L  CS++E     K+ HA  L+  +  D SF  S LV     C   + G       +F
Sbjct: 36  SLLKKCSNMEEF---KQSHARILKLGLFGD-SFCASNLV---ATCALSDWGSMDYACSIF 88

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             + +     +N M+ G+ ++   EEAL+ + +M E  G+ P+  T  +++ AC R  A 
Sbjct: 89  RQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAE-RGVKPDNFTYPTLLKACARLPAV 147

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            +   +H H +KLGL  D +VQN+L+ MY + G I +   +F+ M  R   SW+ +IT +
Sbjct: 148 EEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAH 207

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G   D L LL +M N          +  +E++L         ++VL  C  L AL  
Sbjct: 208 ASLGMWSDCLRLLGDMSN-------EGYWRAEESIL---------VSVLSACTHLGALDL 251

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ +H + +RN+   +V+V ++L++MY KCG L     +F  M  +N ++++V+I    M
Sbjct: 252 GRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAM 311

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
           HG G+E L +   M+ +G     ++P+++ ++ +  ACSH+G+V EG+  F +MK ++GI
Sbjct: 312 HGYGREGLRIFTEMLEQG-----LEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGI 366

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
           EP+  HY C+VDL+GRAGK+++A +LI  MP E +    W SLL A ++H N++ GEIAA
Sbjct: 367 EPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV-LWRSLLSASKVHNNLQAGEIAA 425

Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
           + LF L+   AS YV+LSN+Y+ AQ W+     R  M   G+ + PG S +E   ++H+F
Sbjct: 426 KQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRF 485

Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAF 822
           ++ D  H QSE ++  L  +  +++ EGY PDT+ VL +V+EEEK+  L GHS+KLAIA+
Sbjct: 486 VSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAY 545

Query: 823 GILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            +++T  G+ IR+ +NLR+CNDCH  TK IS I  REI +RD  RFHHFK+G CSC DYW
Sbjct: 546 ALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 11/258 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R   +     EA+++Y EM    ++PDNF +P +LKA A +  +  G Q+HAH++K G 
Sbjct: 103 MRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 162

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             + V V N+L++MYGKCG ++     VF+++ E+   SW+++I      G W   L   
Sbjct: 163 E-NDVFVQNSLISMYGKCG-EIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLL 220

Query: 169 RMML---YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALM 224
             M    Y   E S   LVSV  AC++L     L LGR VHG  LR V   N  +  +L+
Sbjct: 221 GDMSNEGYWRAEES--ILVSVLSACTHLG---ALDLGRSVHGFLLRNVSGLNVIVETSLI 275

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            MY K G +     LF+    ++ +S++ ++S L+ +    E +    +M  +G++PD +
Sbjct: 276 EMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDI 335

Query: 285 SIASVLPACSHLEMLDTG 302
               VL ACSH  ++  G
Sbjct: 336 VYVGVLNACSHAGLVQEG 353



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 194/393 (49%), Gaps = 24/393 (6%)

Query: 82  AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD----VYKVF 137
           ++LK  + +++    KQ HA ++K G    S   +N    +   C    W        +F
Sbjct: 36  SLLKKCSNMEEF---KQSHARILKLGLFGDSFCASN----LVATCALSDWGSMDYACSIF 88

Query: 138 DRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
            ++ E     +N+M+    +    + AL  ++ M    V+P +FT  ++  AC+ L    
Sbjct: 89  RQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLP--- 145

Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
            +  G QVH + L++G E + F+ N+L++MY K G +     +F+   +R + SW+ +++
Sbjct: 146 AVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALIT 205

Query: 257 SLSQNDKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
           + +    + + +  L  M+  G  + +   + SVL AC+HL  LD G+ +H + LRN + 
Sbjct: 206 AHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRN-VS 264

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N  V ++L++MY  C  +  G  +F  ++ K    ++ MI+G   + Y  E L +F +
Sbjct: 265 GLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTE 324

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG-HAIKLGLGRDRYVQN--ALMDMYS 432
           M E  GL P+      V+ AC  S A   +EG+   + +KL  G +  +Q+   ++D+  
Sbjct: 325 MLE-QGLEPDDIVYVGVLNAC--SHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMG 381

Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
           R G+I+ +  +   M +  + V W ++++   +
Sbjct: 382 RAGKIDEALELIKSMPMEPNDVLWRSLLSASKV 414



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 194/416 (46%), Gaps = 43/416 (10%)

Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLF 240
           VS+   CSN+         +Q H   L++G + ++F  + L+A  A    G +D A ++F
Sbjct: 35  VSLLKKCSNMEEF------KQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIF 88

Query: 241 KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
           +  ++     +NT++    ++    EA++  ++MA RG+KPD  +  ++L AC+ L  ++
Sbjct: 89  RQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVE 148

Query: 301 TGKEIHAYALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
            G ++HA+ L+    ND+ + NS     L+ MY  C E+     VF+ ++++ +A W+A+
Sbjct: 149 EGMQVHAHILKLGLENDVFVQNS-----LISMYGKCGEIGVCCAVFEQMNERSVASWSAL 203

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLW-PNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           IT +       + L L   M    G W    + + SV+ AC    A      +HG  ++ 
Sbjct: 204 ITAHASLGMWSDCLRLLGDMSN-EGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRN 262

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
             G +  V+ +L++MY + G +     +F  M  ++ +S++ MI+G  + G   + L + 
Sbjct: 263 VSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIF 322

Query: 476 REM--QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIR 532
            EM  Q +E                   P+ I  + VL  C     + +G +  +   + 
Sbjct: 323 TEMLEQGLE-------------------PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLE 363

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
           + +   +     +VD+  + G ++ A  +   MP+  N + W  ++ A  +H   Q
Sbjct: 364 HGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQ 419


>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/613 (38%), Positives = 345/613 (56%), Gaps = 41/613 (6%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFD 343
           I S+   CS +  L   K++HA+ LR     + +  F+   ++ +  +  +V    RVFD
Sbjct: 42  IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 98

Query: 344 FISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            I +    +WN +I     +    EEA ML+ KM E     P+  T   V+ AC     F
Sbjct: 99  SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 158

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + + +H   +K G G D YV N L+ +Y   G +++++ +FD+M  R  VSWN+MI   
Sbjct: 159 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 218

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G++  AL L REMQ   E                  P+  T+ +VL  C  L +L+ 
Sbjct: 219 VRFGEYDSALQLFREMQRSFE------------------PDGYTMQSVLSACAGLGSLSL 260

Query: 523 GKEIHAYAIRNM---LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           G   HA+ +R     +A DV+V ++L++MY KCG L  A +VF  M  R++ +WN +I+ 
Sbjct: 261 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 320

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           +  HG  +E +     MV    +   V+PN VTF+ L  AC+H G V++G   F  M  D
Sbjct: 321 FATHGRAEEAMNFFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 377

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIHQNVEIG 698
           Y IEP+ +HY C+VDL+ RAG + +A  ++  MP + D A  W SLL AC +   +VE+ 
Sbjct: 378 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD-AVIWRSLLDACCKKGASVELS 436

Query: 699 EIAAQNLFLLEPDVASH-------YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           E  A+N+   + D  S        YVLLS +Y+SA  W+    VRK M E G+RKEPGCS
Sbjct: 437 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 496

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS--CVLHNVNEEEKET 809
            IE     H+F AGD SH Q++Q++  L+ + +R+R  GY+PD S   ++   N+  KE 
Sbjct: 497 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 556

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            L  HSE+LAIAFG++N PP T IR+ KNLRVCNDCH+ TK ISK+ + EII+RD  RFH
Sbjct: 557 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 616

Query: 870 HFKNGTCSCGDYW 882
           HFK+G+CSC DYW
Sbjct: 617 HFKDGSCSCLDYW 629



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 15/261 (5%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA + Y +M  R +  PD   FP VLKA A I   S GKQ+H  +VK+G+G   V V N 
Sbjct: 124 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNG 182

Query: 119 LVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+++YG CG  D+    KVFD + E+  VSWNSMI  L RFG++D AL+ FR M  S  E
Sbjct: 183 LIHLYGSCGCLDL--ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FE 239

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIMNALMAMYAKLGRV 233
           P  +T+ SV  AC+ L     L LG   H   LR  +     +  + N+L+ MY K G +
Sbjct: 240 PDGYTMQSVLSACAGLG---SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 296

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLP 291
             A+ +F+  + RDL SWN ++   + + +  EA+ F  +M  +   ++P+ V+   +L 
Sbjct: 297 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 356

Query: 292 ACSHLEMLDTGKEIHAYALRN 312
           AC+H   ++ G++     +R+
Sbjct: 357 ACNHRGFVNKGRQYFDMMVRD 377



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 38/407 (9%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK------CGSDMWDVYKVFDRITEKDQ 145
           D+S  KQ+HA  ++  Y     T+      +YGK        SD+   ++VFD I     
Sbjct: 51  DMSQLKQLHAFTLRTTYPEEPATLF-----LYGKILQLSSSFSDVNYAFRVFDSIENHSS 105

Query: 146 VSWNSMI-ATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             WN++I A      + + A   +R ML      P   T   V  AC+ +    G   G+
Sbjct: 106 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF---GFSEGK 162

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           QVH   ++ G   + ++ N L+ +Y   G +D A+ +F    +R LVSWN+++ +L +  
Sbjct: 163 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 222

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN---DILIDNS 319
           ++  A+   R+M  R  +PDG ++ SVL AC+ L  L  G   HA+ LR    D+ +D  
Sbjct: 223 EYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD-V 280

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EE 378
            V ++L++MYC C  +    +VF  +  + +A WNAMI G+  +   EEA+  F +M ++
Sbjct: 281 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 340

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL------MDMYS 432
              + PN+ T   ++ AC     F +K    G      + RD  ++ AL      +D+ +
Sbjct: 341 RENVRPNSVTFVGLLIAC-NHRGFVNK----GRQYFDMMVRDYCIEPALEHYGCIVDLIA 395

Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
           R G I  +  +   M ++ D V W +++     C + G ++ L  E+
Sbjct: 396 RAGYITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEI 439


>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g59720, mitochondrial; Flags: Precursor
 gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/613 (38%), Positives = 345/613 (56%), Gaps = 41/613 (6%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFD 343
           I S+   CS +  L   K++HA+ LR     + +  F+   ++ +  +  +V    RVFD
Sbjct: 51  IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107

Query: 344 FISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            I +    +WN +I     +    EEA ML+ KM E     P+  T   V+ AC     F
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            + + +H   +K G G D YV N L+ +Y   G +++++ +FD+M  R  VSWN+MI   
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G++  AL L REMQ   E                  P+  T+ +VL  C  L +L+ 
Sbjct: 228 VRFGEYDSALQLFREMQRSFE------------------PDGYTMQSVLSACAGLGSLSL 269

Query: 523 GKEIHAYAIRNM---LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           G   HA+ +R     +A DV+V ++L++MY KCG L  A +VF  M  R++ +WN +I+ 
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           +  HG  +E +     MV    +   V+PN VTF+ L  AC+H G V++G   F  M  D
Sbjct: 330 FATHGRAEEAMNFFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIHQNVEIG 698
           Y IEP+ +HY C+VDL+ RAG + +A  ++  MP + D A  W SLL AC +   +VE+ 
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD-AVIWRSLLDACCKKGASVELS 445

Query: 699 EIAAQNLFLLEPDVASH-------YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           E  A+N+   + D  S        YVLLS +Y+SA  W+    VRK M E G+RKEPGCS
Sbjct: 446 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS--CVLHNVNEEEKET 809
            IE     H+F AGD SH Q++Q++  L+ + +R+R  GY+PD S   ++   N+  KE 
Sbjct: 506 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 565

Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
            L  HSE+LAIAFG++N PP T IR+ KNLRVCNDCH+ TK ISK+ + EII+RD  RFH
Sbjct: 566 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 625

Query: 870 HFKNGTCSCGDYW 882
           HFK+G+CSC DYW
Sbjct: 626 HFKDGSCSCLDYW 638



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 15/261 (5%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA + Y +M  R +  PD   FP VLKA A I   S GKQ+H  +VK+G+G   V V N 
Sbjct: 133 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNG 191

Query: 119 LVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+++YG CG  D+    KVFD + E+  VSWNSMI  L RFG++D AL+ FR M  S  E
Sbjct: 192 LIHLYGSCGCLDL--ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FE 248

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIMNALMAMYAKLGRV 233
           P  +T+ SV  AC+ L     L LG   H   LR  +     +  + N+L+ MY K G +
Sbjct: 249 PDGYTMQSVLSACAGLG---SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLP 291
             A+ +F+  + RDL SWN ++   + + +  EA+ F  +M  +   ++P+ V+   +L 
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365

Query: 292 ACSHLEMLDTGKEIHAYALRN 312
           AC+H   ++ G++     +R+
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRD 386



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 38/407 (9%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK------CGSDMWDVYKVFDRITEKDQ 145
           D+S  KQ+HA  ++  Y     T+      +YGK        SD+   ++VFD I     
Sbjct: 60  DMSQLKQLHAFTLRTTYPEEPATLF-----LYGKILQLSSSFSDVNYAFRVFDSIENHSS 114

Query: 146 VSWNSMI-ATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
             WN++I A      + + A   +R ML      P   T   V  AC+ +    G   G+
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF---GFSEGK 171

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           QVH   ++ G   + ++ N L+ +Y   G +D A+ +F    +R LVSWN+++ +L +  
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN---DILIDNS 319
           ++  A+   R+M  R  +PDG ++ SVL AC+ L  L  G   HA+ LR    D+ +D  
Sbjct: 232 EYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD-V 289

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EE 378
            V ++L++MYC C  +    +VF  +  + +A WNAMI G+  +   EEA+  F +M ++
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL------MDMYS 432
              + PN+ T   ++ AC     F +K    G      + RD  ++ AL      +D+ +
Sbjct: 350 RENVRPNSVTFVGLLIAC-NHRGFVNK----GRQYFDMMVRDYCIEPALEHYGCIVDLIA 404

Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
           R G I  +  +   M ++ D V W +++     C + G ++ L  E+
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEI 448


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/535 (40%), Positives = 315/535 (58%), Gaps = 42/535 (7%)

Query: 384 PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTI 443
           P+  ++ +V+PAC    A+   + +HG A++ G   D +V NAL+DMY++ G ++ +  +
Sbjct: 11  PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKN----------------- 486
           FD ++ +D VSWN M+ GY+  G+  DAL L  +M+    E N                 
Sbjct: 71  FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130

Query: 487 --------------RNNVYDLDETVLRP----KPNSITLMTVLPGCGALSALAKGKEIHA 528
                          N+  +L   + +     KPN  T+   L  C  L+AL  G++IHA
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190

Query: 529 YAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
           Y +RN   +  + V + L+DMYAK G ++ AR VFD +  +N ++W  ++  YGMHG G+
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           E LE+   M   G     ++P+ VT + +  ACSHSGM+ +G++ F  M  ++G+ P  +
Sbjct: 251 EALEVFDEMRRVG-----LQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQE 305

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HYAC+VDLLGRAG++ +A +LI  M  E   +  W +LL  CRIH NVE+GE AA+ L  
Sbjct: 306 HYACMVDLLGRAGRLNEAMELIEGMQME-PSSIVWVALLSGCRIHANVELGEHAAKQLLE 364

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L  +    Y LLSNIY++A+ W     VR  MK  G+RK PGCSW++       F   D 
Sbjct: 365 LNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADK 424

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H QS+Q++  L +L++R++  GYVP+TS  LH+V++EEK  LL  HSEKLA+A+GIL +
Sbjct: 425 THPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILIS 484

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PG  IR+ KNLRVC DCH A  +IS I   EIILRD  RFHHFK G+CSC  YW
Sbjct: 485 APGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 177/379 (46%), Gaps = 68/379 (17%)

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRV 233
           ++ P   +LV+V  AC+++        G+ VHG ++R G + + F+ NAL+ MYAK G V
Sbjct: 8   DMRPDVVSLVNVLPACASMG---AWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMV 64

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM------------------- 274
           D+A  +F   +++D+VSWN +V+  SQ  +F +A+    +M                   
Sbjct: 65  DEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAF 124

Query: 275 ALRG---------------------------------IKPDGVSIASVLPACSHLEMLDT 301
           A RG                                 +KP+  +I+  L AC+ L  L  
Sbjct: 125 AQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRL 184

Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
           G++IHAY LRN       +V + L+DMY    +++  R VFD +  K    W +++TGYG
Sbjct: 185 GRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYG 244

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK-EGIHGHAIKLGL--G 418
            +   +EAL +F +M  V GL P+  T+  V+ AC  S       E  +  + + G+  G
Sbjct: 245 MHGRGKEALEVFDEMRRV-GLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPG 303

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI-----CGQHGDAL 472
           ++ Y    ++D+  R GR+  +  + + M++   ++ W  +++G  I      G+H    
Sbjct: 304 QEHYA--CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQ 361

Query: 473 MLLREMQNMEEEKNRNNVY 491
           +L    +N       +N+Y
Sbjct: 362 LLELNSENDGSYTLLSNIY 380



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 59/288 (20%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D++PD  +   VL A A +     GK +H   V+ G     + V N LV+MY KCG  + 
Sbjct: 8   DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSG-SFEDLFVGNALVDMYAKCGM-VD 65

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE-------------- 177
           +  KVFDRI EKD VSWN+M+    + G+++ AL  F  M   N+E              
Sbjct: 66  EASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFA 125

Query: 178 --------------------------------------PSSFTLVSVALACSNLSRRDGL 199
                                                 P+ FT+    +AC+ L+    L
Sbjct: 126 QRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLA---AL 182

Query: 200 RLGRQVHGNSLRVGEWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGRQ+H   LR    + F  + N L+ MYAK G +D A+ +F + + ++ VSW ++++ 
Sbjct: 183 RLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTG 242

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
              + +  EA+    +M   G++PDGV++  VL ACSH  M+D G E 
Sbjct: 243 YGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEF 290



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 84/137 (61%), Gaps = 5/137 (3%)

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           +P+ ++L+ VLP C ++ A   GK +H  A+R+    D+ VG+ALVDMYAKCG ++ A +
Sbjct: 10  RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VFD +  ++V++WN ++  Y   G  ++ L L + M  E      ++ N V++ A+ AA 
Sbjct: 70  VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREE-----NIELNVVSWSAVIAAF 124

Query: 621 SHSGMVSEGMDLFYKMK 637
           +  G+  E +D+F +M+
Sbjct: 125 AQRGLGCETLDVFREMQ 141



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 52  EARSNQFREAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           E +  +  +A+  +  M + D  ++P+ F     L A A +  L LG+QIHA++++  + 
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
            + + VAN L++MY K G D+     VFD + +K+ VSW S++      G+   ALE F 
Sbjct: 199 SAFLYVANCLIDMYAKSG-DIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFD 257

Query: 170 MMLYSNVEPSSFTLVSVALACSN 192
            M    ++P   TL+ V  ACS+
Sbjct: 258 EMRRVGLQPDGVTLLVVLYACSH 280


>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/531 (42%), Positives = 326/531 (61%), Gaps = 23/531 (4%)

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           ++ +F+ M  V+G  PN  T   V  AC       + E I  HAIK+GL  + +V NA++
Sbjct: 15  SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMI 74

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME------ 482
            MY+  G ++ ++ +FD    +D  SWN MI GY   G+ G A  +  EM   +      
Sbjct: 75  RMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTT 134

Query: 483 ------EEKNRNNVYDLDETVLR--PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
                 +        DL   +L+  P PN  TL + L  C  L AL +G+ IH Y  ++ 
Sbjct: 135 IIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSE 194

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVR-NVITWNVIIMAYGMHGEGQEVLEL 592
           +  +  + ++L+DMYAKCG ++FA +VF D   ++  V  WN +I  Y MHG+ +E ++L
Sbjct: 195 IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDL 254

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
            + M  E     +V PN+VTF+AL  ACSH  +V EG   F  M   YGIEP  +HY C+
Sbjct: 255 FEQMKVE-----KVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCM 309

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VDLLGR+G +++A + +  MP   D A  W +LLGACRIH+++E G+   + +  L+ D 
Sbjct: 310 VDLLGRSGLLKEAEETVFNMPMAPD-ATIWGALLGACRIHKDIERGQRIGKIIKELDSDH 368

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
              +VLL+N+YS++  WD+A  VR+K++  G +K PGCS IE     H+FL GD SH Q+
Sbjct: 369 IGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQT 428

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPGT 831
           +QL+ FL+ ++ +++  GYVP+   VL ++++EE KET L  HSEKLAIAFG++NTPPGT
Sbjct: 429 KQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGT 488

Query: 832 TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            IR+ KNLRVC DCH+ATKFISK+  REII+RD  R+HHFK+G CSC DYW
Sbjct: 489 AIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 44/337 (13%)

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
           M+  S   P+ +T V V  AC N     G+  G Q+  +++++G E N F+ NA++ MYA
Sbjct: 22  MVRVSGFLPNRYTFVFVFKACGN---GLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYA 78

Query: 229 KLGRVDDA-------------------------------KTLFKSFEDRDLVSWNTIVSS 257
             G VD+A                               K +F    +RD+VSW TI++ 
Sbjct: 79  NWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAG 138

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             Q   F EA+    +M   G  P+  ++AS L AC++L  LD G+ IH Y  +++I ++
Sbjct: 139 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 198

Query: 318 NSFVGSALVDMYCNCREVECGRRVF--DFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
              + S L+DMY  C E++   +VF  ++    K+  WNAMI GY  +   +EA+ LF +
Sbjct: 199 ERLLAS-LLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ 257

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-IHGHAIKLGLGRDRYVQNALMDMYSRM 434
           M +V  + PN  T  +++ AC   +   +  G     A   G+  +      ++D+  R 
Sbjct: 258 M-KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRS 316

Query: 435 GRI-EISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
           G + E  +T+F+     D   W  ++     C  H D
Sbjct: 317 GLLKEAEETVFNMPMAPDATIWGALLGA---CRIHKD 350



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 44/276 (15%)

Query: 65  YIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
           ++ M R S   P+ + F  V KA      +  G+QI  H +K G   S++ V N ++ MY
Sbjct: 19  FLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLE-SNLFVTNAMIRMY 77

Query: 124 GKCG--------------SDM--WDVY--------------KVFDRITEKDQVSWNSMIA 153
              G               D+  W++               ++FD ++E+D VSW ++IA
Sbjct: 78  ANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIA 137

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNS 209
              + G +  AL+ F  ML +   P+ FTL S   AC+NL   D    GR +H     + 
Sbjct: 138 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQ---GRWIHVYIDKSE 194

Query: 210 LRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV--SWNTIVSSLSQNDKFLEA 267
           +++   N  ++ +L+ MYAK G +D A  +F       L    WN ++   + + K  EA
Sbjct: 195 IKM---NERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEA 251

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           +    QM +  + P+ V+  ++L ACSH ++++ G+
Sbjct: 252 IDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGR 287



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 57/366 (15%)

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
           +FL  + + G  P+  +   V  AC +   +  G++I  +A++   L  N FV +A++ M
Sbjct: 18  IFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIG-LESNLFVTNAMIRM 76

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGY-GQNE-------YDE------------- 367
           Y N   V+  RRVFD+  D+ +  WN MI GY G  E       +DE             
Sbjct: 77  YANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTII 136

Query: 368 ----------EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
                     EAL LF +M +  G  PN  T++S + AC    A      IH +  K  +
Sbjct: 137 AGYVQVGCFKEALDLFHEMLQT-GPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEI 195

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIF-DDMEVRDTV-SWNTMITGYTICGQHGDALMLL 475
             +  +  +L+DMY++ G I+ +  +F D+  ++  V  WN MI GY + G+  +A+ L 
Sbjct: 196 KMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLF 255

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK-EIHAYAIRNM 534
            +M+                 V +  PN +T + +L  C     + +G+    + A    
Sbjct: 256 EQMK-----------------VEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYG 298

Query: 535 LATDVVVGSALVDMYAKCGCLNFARR-VFDLMPVRNVITWNVIIMAYGMHGE---GQEVL 590
           +  ++     +VD+  + G L  A   VF++    +   W  ++ A  +H +   GQ + 
Sbjct: 299 IEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIG 358

Query: 591 ELLKNM 596
           +++K +
Sbjct: 359 KIIKEL 364



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +   F+EA+  + EM ++   P+ F   + L A A +  L  G+ IH ++
Sbjct: 131 SWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI 190

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV-SWNSMIATLCRFGKWD 162
            K    ++   +A +L++MY KCG   +      D    K +V  WN+MI      GK  
Sbjct: 191 DKSEIKMNERLLA-SLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSK 249

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            A++ F  M    V P+  T V++  ACS+
Sbjct: 250 EAIDLFEQMKVEKVSPNKVTFVALLNACSH 279


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/737 (33%), Positives = 412/737 (55%), Gaps = 38/737 (5%)

Query: 58  FREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLS--LGKQIHAHVVKYGYGLSSVT 114
           + E+++ +++  R+    P+ +   + ++A +G+      +  Q+ + +VK  +    V 
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFD-RDVY 184

Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
           V   L++ Y K G+  +    VFD + EK  V+W +MI+   + G+  ++L+ F  ++  
Sbjct: 185 VGTLLIDFYLKEGNIDY-ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243

Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
           NV P  + L +V  ACS L   +G   G+Q+H + LR G E +  +MN L+  Y K GRV
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEG---GKQIHAHILRYGHEKDASLMNVLIDSYVKCGRV 300

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A  LF    +++++SW T++S   QN    EA+     M   G+KPD  + +S+L +C
Sbjct: 301 RAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSC 360

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           + L  L+ G ++HAY ++ + L ++S+V ++L+DMY  C  +   R+VFD  +   + L+
Sbjct: 361 ASLHALEFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419

Query: 354 NAMITGY---GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
           NAMI GY   G      +AL +F  M     + P+  T  S++ A     +    + IHG
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMR-FRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
              K GL  D +  +AL+ +YS    ++ S+ +FD+M+V+D V WN+M +GY    ++ +
Sbjct: 479 LMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEE 538

Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
           AL L  E+Q                 + R +P+  T + ++   G L++L  G+E H   
Sbjct: 539 ALNLFLELQ-----------------LSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQL 581

Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
           ++  L  +  + +AL+DMYAKCG    A + FD    R+V+ WN +I +Y  HGEG++ L
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKAL 641

Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
           ++L+ M+ EG     ++PN +TF+ + +ACSH+G+V +G+  F  M   +GIEP  +HY 
Sbjct: 642 QMLEKMMCEG-----IEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYV 695

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
           C+V LLGRAG++ +A +LI  MP +   A  W SLL  C    NVE+ E AA+   L +P
Sbjct: 696 CMVSLLGRAGRLNEARELIEKMPTK-PAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDP 754

Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
             +  + LLSNIY+S  +W  A  VR++MK  GV KEPG SWIE   E+H FL+ D SH 
Sbjct: 755 KDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHC 814

Query: 771 QSEQLHGFLENLSERMR 787
           ++ Q++  L++L  ++R
Sbjct: 815 KANQIYEVLDDLLVQIR 831



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 166/603 (27%), Positives = 294/603 (48%), Gaps = 43/603 (7%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H  ++  G  L +  ++N L+N+Y + G  ++   KVF+++ E++ V+W++M++     
Sbjct: 66  VHGQIIVSGLELDTY-LSNILMNLYSRAGGMVY-ARKVFEKMPERNLVTWSTMVSACNHH 123

Query: 159 GKWDLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG---E 214
           G ++ +L  F     +    P+ + L S   ACS L   DG          S  V    +
Sbjct: 124 GFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGL---DGSGRWMVFQLQSFLVKSRFD 180

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            + ++   L+  Y K G +D A+ +F +  ++  V+W T++S   +  +   ++    Q+
Sbjct: 181 RDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
               + PDG  +++VL ACS L  L+ GK+IHA+ LR     D S + + L+D Y  C  
Sbjct: 241 MEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLM-NVLIDSYVKCGR 299

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           V    ++FD + +K I  W  +++GY QN   +EA+ LF  M +  GL P+    SS++ 
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKF-GLKPDMFACSSILT 358

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           +C    A      +H + IK  LG D YV N+L+DMY++   +  ++ +FD     D V 
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVL 418

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           +N MI GY+  G               E     N  +D+   ++R  P+ +T +++L   
Sbjct: 419 FNAMIEGYSRLGTQ------------WELHDALNIFHDMRFRLIR--PSLLTFVSLLRAS 464

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
            +L++L   K+IH    +  L  D+  GSAL+ +Y+ C CL  +R VFD M V++++ WN
Sbjct: 465 ASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWN 524

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +   Y    E +E L L   +     R     P+E TF+ +  A  +   +  G + F+
Sbjct: 525 SMFSGYVQQSENEEALNLFLELQLSRDR-----PDEFTFVDMVTAAGNLASLQLGQE-FH 578

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA-----WSSLLGAC 689
                 G+E +P     ++D+  + G  EDA++        FD A +     W+S++ + 
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHK-------AFDSAASRDVVCWNSVISSY 631

Query: 690 RIH 692
             H
Sbjct: 632 ANH 634



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 219/434 (50%), Gaps = 19/434 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    +++  +EA+  +  M +  ++PD FA  ++L + A +  L  G Q+HA+ 
Sbjct: 317 SWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYT 376

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG-KWD 162
           +K   G  S  V N+L++MY KC   + +  KVFD     D V +N+MI    R G +W+
Sbjct: 377 IKANLGNDSY-VTNSLIDMYAKCDC-LTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWE 434

Query: 163 L--ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
           L  AL  F  M +  + PS  T VS+  A ++L+    L L +Q+HG   + G   + F 
Sbjct: 435 LHDALNIFHDMRFRLIRPSLLTFVSLLRASASLT---SLGLSKQIHGLMFKFGLNLDIFA 491

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            +AL+A+Y+    + D++ +F   + +DLV WN++ S   Q  +  EA+    ++ L   
Sbjct: 492 GSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRD 551

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           +PD  +   ++ A  +L  L  G+E H   L+   L  N ++ +AL+DMY  C   E   
Sbjct: 552 RPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRG-LECNPYITNALLDMYAKCGSPEDAH 610

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           + FD  + + +  WN++I+ Y  +    +AL +  KM    G+ PN  T   V+ AC  S
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKM-MCEGIEPNYITFVGVLSAC--S 667

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVRD-TVSWN 456
            A   ++G+    + L  G +   ++   ++ +  R GR+  ++ + + M  +   + W 
Sbjct: 668 HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWR 727

Query: 457 TMITGYTICGQHGD 470
           ++++G   C + G+
Sbjct: 728 SLLSG---CAKAGN 738



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 44/397 (11%)

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           ++++ + L+++Y     +   R+VF+ + ++ +  W+ M++    + + EE+L++F+   
Sbjct: 78  DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEG------IHGHAIKLGLGRDRYVQNALMDMY 431
                 PN   +SS + AC    +  D  G      +    +K    RD YV   L+D Y
Sbjct: 138 RTRKNSPNEYILSSFIQAC----SGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFY 193

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
            + G I+ ++ +FD +  + TV+W TMI+G    G+   +L L  ++  ME      NV 
Sbjct: 194 LKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL--ME-----GNVV 246

Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
                     P+   L TVL  C  L  L  GK+IHA+ +R     D  + + L+D Y K
Sbjct: 247 ----------PDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVK 296

Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
           CG +  A ++FD MP +N+I+W  ++  Y  +   +E +EL  +M   G     +KP+  
Sbjct: 297 CGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFG-----LKPDMF 351

Query: 612 TFIALFAACSHSGMVSEGMDLF-YKMK-----DDYGIEPSPDHYACVVDLLGRAGKVEDA 665
              ++  +C+    +  G  +  Y +K     D Y      D YA   D L  A KV D 
Sbjct: 352 ACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA-KCDCLTEARKVFDI 410

Query: 666 YQ-----LINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           +      L N M   + + G    L  A  I  ++  
Sbjct: 411 FAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF 447


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/817 (32%), Positives = 418/817 (51%), Gaps = 59/817 (7%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D  A+ ++LK    +  L   K I AH+           + N +V  YGKCG  + D   
Sbjct: 82  DPAAYVSLLKQSGDVTAL---KTIQAHISHSKRFAGDRLLLNCVVEAYGKCGC-VKDARL 137

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           VF  I   +  SW  ++A   + G     LE  R M    V P++ TL +V  A S L  
Sbjct: 138 VFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGN 197

Query: 196 RDGLRLGRQVHGNSLRVGE--WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
            D     R++H  +    +  ++  ++ AL+ MYAK G +  A+ +F    ++DL   N 
Sbjct: 198 WDE---ARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNA 254

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA----YA 309
           ++S+  Q    ++AV    ++   G++P+ V+ A +  AC+   +    +  H       
Sbjct: 255 MISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSK 314

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           LR D++++     +ALV MY  C  +E  RRVFD +  K +  WN MI GY Q  Y +EA
Sbjct: 315 LRPDVVVN-----TALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L L++ ME  AG+ P+  T  +V+ +C  +E       IH H +  G      V +AL+ 
Sbjct: 370 LQLYVSME-AAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALIT 428

Query: 430 MYSRMGRIEISKTIFDDMEVRDT--VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           MYS  G +  +  +F       +  +SW  M+T  T  G+   AL L R+M         
Sbjct: 429 MYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKM--------- 479

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
               DL+      + N +T ++ +  C ++ AL +G  I    I      DVV+G++L++
Sbjct: 480 ----DLEGV----RANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLIN 531

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           +Y KCG L++A  VF  +  +N++TWN I+ A   +GE     ELL+ M  +G+     +
Sbjct: 532 LYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGA-----Q 586

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PNE+T + +   CSH+G+V++ +  F  M   + + P+ +HY C+VDLLGR+G++E+   
Sbjct: 587 PNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEA 646

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
            I+  P   D    W SLLG+C IH +VE G  AA+ +  L+P  AS YVLLSN++++  
Sbjct: 647 FISSKPFSLDSV-LWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIG 705

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
           + D    + K   E  ++KE   S+IE    +H+F    G H+  E++   L   SE M 
Sbjct: 706 MLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEME 765

Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
           + G+VP     LH+V           H EKLAIAFG +++PPG  + V KNLR+C  CH 
Sbjct: 766 EAGFVP-----LHDVRGY--------HDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHG 812

Query: 848 ATKFISKIESREIILRDVRRFHHFK--NGTCSCGDYW 882
             K I K+  R+I +R+  R HHF+  + +CSCGDYW
Sbjct: 813 EIKHICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 234/516 (45%), Gaps = 37/516 (7%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L + A++   +  +    +M    + P+      V+ AV+ + +    ++IHA  
Sbjct: 149 SWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARA 208

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
                    V +   L++MY KCG D++    VFD+   KD    N+MI+   + G    
Sbjct: 209 AATCQLTYDVVLVTALIDMYAKCG-DIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVD 267

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS-LRVGEWNTFIMNA 222
           A+  F  +  S ++P+  T   +  AC+        R+       S LR    +  +  A
Sbjct: 268 AVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRP---DVVVNTA 324

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY++ G ++DA+ +F     +++V+WN +++  +Q     EA+     M   G++PD
Sbjct: 325 LVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPD 384

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRV 341
            ++  +VL +CS  E L  G++IH + +  D   D+S  V SAL+ MY  C  +     V
Sbjct: 385 EITFVNVLESCSLAEHLAAGRDIHKHVV--DAGYDSSLTVLSALITMYSACGSLGDAVDV 442

Query: 342 FD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           F     +   +  W AM+T   +N     AL LF KM ++ G+  N  T  S + AC   
Sbjct: 443 FHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKM-DLEGVRANVVTFVSTIDACSSI 501

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A  +   I    I  G   D  +  +L+++Y + GR++ +  +F  +  ++ V+WNT++
Sbjct: 502 GALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTIL 561

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
              +  G+   +  LL+EM             DLD      +PN +TL+ +L GC     
Sbjct: 562 AASSQNGEETLSDELLQEM-------------DLDGA----QPNEMTLLNMLFGCSHNGL 604

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           +AK         R+M     V G  LV      GCL
Sbjct: 605 VAKAVSY----FRSM-----VYGHCLVPTSEHYGCL 631



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 153/312 (49%), Gaps = 11/312 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     EA+  Y+ M  + ++PD   F  VL++ +  + L+ G+ IH HV
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV 411

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKW 161
           V  GY  SS+TV + L+ MY  CGS + D   VF +   T    +SW +M+  L R G+ 
Sbjct: 412 VDAGYD-SSLTVLSALITMYSACGS-LGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM- 220
             AL  FR M    V  +  T VS   ACS++     L  G  +    +  G     ++ 
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIG---ALVEGHAIFERVIVTGHLIDVVLG 526

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+ +Y K GR+D A  +F     +++V+WNTI+++ SQN +   +   L++M L G +
Sbjct: 527 TSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQ 586

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           P+ +++ ++L  CSH  ++          +    L+  S     LVD+     ++E    
Sbjct: 587 PNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLE---E 643

Query: 341 VFDFISDKKIAL 352
           V  FIS K  +L
Sbjct: 644 VEAFISSKPFSL 655


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/602 (38%), Positives = 346/602 (57%), Gaps = 49/602 (8%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR----EVECGRRV 341
           + S++P C+ L+ L   K+I AY ++ +   +N+ V +  ++ +C        +E   ++
Sbjct: 29  LISLIPKCTTLKEL---KQIQAYTIKTNYQ-NNTNVITKFIN-FCTSNPTKASMEHAHQL 83

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD I+   I L+N M  GY +   ++   M+              T     +    + +A
Sbjct: 84  FDQITQPNIVLFNTMARGYAR--LNDPLRMI--------------THFRRCLRLVSKVKA 127

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             + + +H  A+KLG+  + YV   L++MY+  G I+ S+ +FD ++    V++N +I  
Sbjct: 128 LAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMS 187

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
                +  +AL L RE+Q                  +  KP  +T++ VL  C  L +L 
Sbjct: 188 LARNNRANEALALFRELQE-----------------IGLKPTDVTMLVVLSSCALLGSLD 230

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G+ +H Y  +      V V + L+DMYAKCG L+ A  VF  MP R+   W+ II+AY 
Sbjct: 231 LGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYA 290

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
            HG+G + + +L  M  E     +V+P+E+TF+ +  ACSH+G+V EG + F+ M ++YG
Sbjct: 291 THGDGFQAISMLNEMKKE-----KVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYG 345

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I PS  HY C+VDLLGRAG++++AY+ I+ +P +      W +LL AC  H NVE+G+  
Sbjct: 346 IVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIK-PTPILWRTLLSACSTHGNVEMGKRV 404

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
            + +F L+      YV+ SN+ +    WD    +RK M + G  K PGCS IE  + +H+
Sbjct: 405 IERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHE 464

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGHSEKLAI 820
           F AG+G H  S  LH  L+ L + ++  GYVPDTS V + ++ +EEKE +L  HSEKLAI
Sbjct: 465 FFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAI 524

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
            FG+LNTPPGTTIRV KNLRVC DCH A KFIS I  R+IILRDV+RFHHFK+G CSCGD
Sbjct: 525 TFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGD 584

Query: 881 YW 882
           YW
Sbjct: 585 YW 586



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 202/435 (46%), Gaps = 46/435 (10%)

Query: 63  LSYIEMTRSDIQPDNF-AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVN 121
           L+   +T+ + +  +    P ++  +     L   KQI A+ +K  Y  ++  V    +N
Sbjct: 8   LTSFSLTKPNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQ-NNTNVITKFIN 66

Query: 122 MYGKCGSD-----MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
               C S+     M   +++FD+IT+ + V +N+M     R       +  FR  L    
Sbjct: 67  F---CTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCL---- 119

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
                           +S+   L  G+Q+H  ++++G   N +++  L+ MY   G +D 
Sbjct: 120 --------------RLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDA 165

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           ++ +F   ++  +V++N I+ SL++N++  EA+   R++   G+KP  V++  VL +C+ 
Sbjct: 166 SRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCAL 225

Query: 296 LEMLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           L  LD G+ +H Y  +   D  +    V + L+DMY  C  ++    VF  +  +    W
Sbjct: 226 LGSLDLGRWMHEYVKKYGFDRYVK---VNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAW 282

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----EAFPDKEGIH 409
           +A+I  Y  +    +A+ +  +M++   + P+  T   ++ AC  +    E F   E  H
Sbjct: 283 SAIIVAYATHGDGFQAISMLNEMKK-EKVQPDEITFLGILYACSHNGLVEEGF---EYFH 338

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQH 468
           G   + G+         ++D+  R GR++ +    D++ ++ T + W T+++    C  H
Sbjct: 339 GMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSA---CSTH 395

Query: 469 GDALMLLREMQNMEE 483
           G+  M  R ++ + E
Sbjct: 396 GNVEMGKRVIERIFE 410



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 8/224 (3%)

Query: 41  CKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIH 100
           C  ++   + S AR+N+  EA+  + E+    ++P +     VL + A +  L LG+ +H
Sbjct: 177 CVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMH 236

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            +V KYG+    V V  TL++MY KCGS + D   VF  + ++D  +W+++I      G 
Sbjct: 237 EYVKKYGFD-RYVKVNTTLIDMYAKCGS-LDDAVNVFRDMPKRDTQAWSAIIVAYATHGD 294

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACS-NLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
              A+     M    V+P   T + +  ACS N    +G       HG +   G   +  
Sbjct: 295 GFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEY---FHGMTNEYGIVPSIK 351

Query: 220 MNALMA-MYAKLGRVDDAKTLFKSFEDRDL-VSWNTIVSSLSQN 261
               M  +  + GR+D+A         +   + W T++S+ S +
Sbjct: 352 HYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTH 395


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/767 (33%), Positives = 420/767 (54%), Gaps = 38/767 (4%)

Query: 32  LPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           +P+P    R   +W   +   A++  + EA+  + +M++  ++       +VL A+A + 
Sbjct: 175 MPIP---IRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLA 231

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
            L+ G  +HAH +K G+  SS+ VA++L+NMYGKC     D  +VFD I++K+ + WN+M
Sbjct: 232 ALNHGLLVHAHAIKQGFE-SSIYVASSLINMYGKCQMPD-DARQVFDAISQKNMIVWNAM 289

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           +    + G     +E F  M+   + P  FT  S+   C+     + L +GRQ+H   ++
Sbjct: 290 LGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACF---EYLEVGRQLHSAIIK 346

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
                N F+ NAL+ MYAK G + +A   F+    RD +SWN I+    Q +    A   
Sbjct: 347 KRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSL 406

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
            R+M L GI PD VS+AS+L AC ++++L+ G++ H  +++   L  N F GS+L+DMY 
Sbjct: 407 FRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLG-LETNLFAGSSLIDMYS 465

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C +++   + +  + ++ +   NA+I GY      +E++ L  +M+ + GL P+  T +
Sbjct: 466 KCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQ-ILGLKPSEITFA 523

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDME- 448
           S++  C  S        IH   +K GL     ++  +L+ MY    R+  +  +F +   
Sbjct: 524 SLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSS 583

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
           ++  V W  +I+G+        AL L REM++       NN+           P+  T +
Sbjct: 584 LKSIVMWTALISGHIQNECSDVALNLYREMRD-------NNI----------SPDQATFV 626

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD-LMPV 567
           TVL  C  LS+L  G+EIH+         D +  SALVDMYAKCG +  + +VF+ L   
Sbjct: 627 TVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATK 686

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           ++VI+WN +I+ +  +G  +  L++   M         + P++VTF+ +  ACSH+G V 
Sbjct: 687 KDVISWNSMIVGFAKNGYAKCALKVFDEMTQSC-----ITPDDVTFLGVLTACSHAGWVY 741

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           EG  +F  M + YGIEP  DHYAC+VDLLGR G +++A + I+ +  E   A  W++LLG
Sbjct: 742 EGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVE-PNAMIWANLLG 800

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           ACRIH + + G+ AA+ L  LEP  +S YVLLSN+Y+++  WD+A  +R+ M +  ++K 
Sbjct: 801 ACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKI 860

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           PGCSWI  G E + F+AGD SH   +++   L++L+  ++      D
Sbjct: 861 PGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKDNNRFQD 907



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 274/572 (47%), Gaps = 69/572 (12%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           Y     S   PD F F   L A A +Q+L LG+ +H+ V+K G   +S      L+++Y 
Sbjct: 35  YASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFC-QGALIHLYA 93

Query: 125 KCGSDMWDVYKVFDR--ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFT 182
           KC S +     +F          VSW ++I+   + G    AL  F  M  S V P    
Sbjct: 94  KCNS-LTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVA 151

Query: 183 LVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
           LV+V                                 +NA    Y  LG++DDA  LF+ 
Sbjct: 152 LVTV---------------------------------LNA----YISLGKLDDACQLFQQ 174

Query: 243 --FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLD 300
                R++V+WN ++S  ++   + EA+ F  QM+  G+K    ++ASVL A + L  L+
Sbjct: 175 MPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN 234

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
            G  +HA+A++      + +V S+L++MY  C+  +  R+VFD IS K + +WNAM+  Y
Sbjct: 235 HGLLVHAHAIKQG-FESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVY 293

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            QN +    + LF+ M    G+ P+  T +S++  C   E       +H   IK     +
Sbjct: 294 SQNGFLSNVMELFLDMIS-CGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSN 352

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            +V NAL+DMY++ G ++ +   F+ M  RD +SWN +I GY        A  L R M  
Sbjct: 353 LFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMI- 411

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                       LD  V    P+ ++L ++L  CG +  L  G++ H  +++  L T++ 
Sbjct: 412 ------------LDGIV----PDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLF 455

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
            GS+L+DMY+KCG +  A + +  MP R+V++ N +I  Y +    +E + LL  M   G
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESINLLHEMQILG 514

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
                +KP+E+TF +L   C  S  V  G+ +
Sbjct: 515 -----LKPSEITFASLIDVCKGSAKVILGLQI 541



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 59/325 (18%)

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
           ++  WN  + G     Y  E ++ F      +G  P+  T +  + AC + +       +
Sbjct: 12  RVRQWNWRVQG--TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAV 69

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV--RDTVSWNTMITGYTICG 466
           H   IK GL    + Q AL+ +Y++   +  ++TIF         TVSW  +I+GY   G
Sbjct: 70  HSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG 129

Query: 467 QHGDALMLLREMQNMEEEKNRN-----NVY----------DLDETVLRPKPNSITLMTVL 511
              +AL +  +M+N             N Y           L + +  P  N +    ++
Sbjct: 130 LPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMI 189

Query: 512 PG-----------------------------CGALSALAK------GKEIHAYAIRNMLA 536
            G                                LSA+A       G  +HA+AI+    
Sbjct: 190 SGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE 249

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           + + V S+L++MY KC   + AR+VFD +  +N+I WN ++  Y  +G    V+EL  +M
Sbjct: 250 SSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDM 309

Query: 597 VAEGSRGGEVKPNEVTFIALFAACS 621
           ++ G     + P+E T+ ++ + C+
Sbjct: 310 ISCG-----IHPDEFTYTSILSTCA 329



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+  T    L  C  L  L  G+ +H+  I++ L +      AL+ +YAKC  L  AR +
Sbjct: 45  PDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTI 104

Query: 562 FDLMPVRNV--ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           F   P  ++  ++W  +I  Y   G   E L +   M     R   V P++V  + +  A
Sbjct: 105 FASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKM-----RNSAV-PDQVALVTVLNA 158

Query: 620 CSHSGMVSEGMDLFYKM 636
               G + +   LF +M
Sbjct: 159 YISLGKLDDACQLFQQM 175


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/689 (35%), Positives = 384/689 (55%), Gaps = 43/689 (6%)

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTL 239
            T ++  L CS  S+        Q+H   +     +  F+ N L+ +YAK G VD    L
Sbjct: 30  LTSLNSLLNCSRTSKH-----ATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLL 84

Query: 240 FKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
           F S  D  +++VSW ++++ L++  +  +A+ F   M   G+ P+  + ++VL AC+   
Sbjct: 85  FSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTT 144

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
               G+++H+   ++  L +  FV SALVDMY  C ++    +VF+ +  + +  WN MI
Sbjct: 145 ASVHGEQMHSLVWKHGFLAE-VFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMI 203

Query: 358 TGYGQNEYDEEALMLF--IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
            G+ QN+  ++A+  F  + +E +  L  +  + SSV  AC  +      + +HG A+KL
Sbjct: 204 VGFLQNKLYDQAIFFFKTLLLENLTAL--DEVSFSSVFSACANAGNLEFGKQVHGVALKL 261

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA---L 472
           G+    Y+ N+L DMY + G       +F +   RD V+WN MI  Y     + DA    
Sbjct: 262 GVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSF 321

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            ++R   ++                    P+  +  +VL  C  L+AL +G  IH   IR
Sbjct: 322 WMMRRKGSI--------------------PDEASYSSVLHSCANLAALYQGTLIHNQIIR 361

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           +    ++ V S+L+ MYAKCG L  A ++F+    RNV+ W  II A   HG    V+EL
Sbjct: 362 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 421

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
            + M+ EG     +KP+ +TF+++ +ACSH+G V EG   F  M   +GI P  +HYAC+
Sbjct: 422 FEQMLREG-----IKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACI 476

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           VDLL RAG+++ A + I +MP + D A  W +LL ACR H N+ +G+  A  LF LEPD 
Sbjct: 477 VDLLSRAGELDRAKRFIELMPIKPD-ASVWGALLSACRNHSNLIMGKEVALKLFDLEPDN 535

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
             +YVLL NI +   + ++A +VR+KM+ +GVRKEPGCSWI+  +  + F   D SH+++
Sbjct: 536 PGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKT 595

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
           ++++  LE L E ++K+GYV +T   + N  EE KE  L  HSEK+A+AFG+L+ P G  
Sbjct: 596 KEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAP 654

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREII 861
           IR+ KNLR C DCH   KF S+I +REII
Sbjct: 655 IRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 160/573 (27%), Positives = 266/573 (46%), Gaps = 73/573 (12%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE--KDQVSWNSMIATL 155
           QIH+ ++     LS   + N L+N+Y KCGS +     +F    +  K+ VSW S+I  L
Sbjct: 48  QIHSQLITTAL-LSLPFLFNNLLNLYAKCGS-VDQTLLLFSSAPDDSKNVVSWTSLITQL 105

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            RF +   AL  F  M  S V P+ +T  +V  AC++ +          VHG  +    W
Sbjct: 106 TRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTT--------ASVHGEQMHSLVW 157

Query: 216 N------TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
                   F+++AL+ MYAK   +  A+ +F+    R+LVSWNT++    QN  + +A+ 
Sbjct: 158 KHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIF 217

Query: 270 FLRQMALRGIKP-DGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSA 324
           F + + L  +   D VS +SV  AC++   L+ GK++H  AL+    N + I+NS     
Sbjct: 218 FFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNS----- 272

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           L DMY  C       ++F     + +  WN MI  Y  N   E+A   F  M    G  P
Sbjct: 273 LSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRR-KGSIP 331

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +  + SSV+ +C    A      IH   I+ G  ++  V ++L+ MY++ G +  +  IF
Sbjct: 332 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIF 391

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KP 502
           ++ E R+ V W  +I     C QHG A                N V +L E +LR   KP
Sbjct: 392 EETEDRNVVCWTAIIAA---CQQHGHA----------------NWVVELFEQMLREGIKP 432

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNF 557
           + IT ++VL  C     + +G     +   +M+    +       + +VD+ ++ G L+ 
Sbjct: 433 DYITFVSVLSACSHTGRVEEG----FFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDR 488

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTF 613
           A+R  +LMP++ +   W  ++ A   H     G+EV   L ++  +         N   +
Sbjct: 489 AKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPD---------NPGNY 539

Query: 614 IALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           + L    + +GM++E  ++  KM +  G+   P
Sbjct: 540 VLLCNILTRNGMLNEADEVRRKM-ESIGVRKEP 571



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 218/436 (50%), Gaps = 18/436 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R  +  +A+  +  M RS + P+++ F AVL A         G+Q+H+ V
Sbjct: 97  SWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLV 156

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K+G+ L+ V V + LV+MY KC  DM    KVF+ +  ++ VSWN+MI    +   +D 
Sbjct: 157 WKHGF-LAEVFVVSALVDMYAKC-CDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQ 214

Query: 164 ALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMN 221
           A+  F+ +L  N+      +  SV  AC+N      L  G+QVHG +L++G WN  +I N
Sbjct: 215 AIFFFKTLLLENLTALDEVSFSSVFSACANAG---NLEFGKQVHGVALKLGVWNLVYINN 271

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L  MY K G  +D   LF +   RD+V+WN ++ +   N  + +A      M  +G  P
Sbjct: 272 SLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIP 331

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D  S +SVL +C++L  L  G  IH   +R+   + N  V S+L+ MY  C  +    ++
Sbjct: 332 DEASYSSVLHSCANLAALYQGTLIHNQIIRSG-FVKNLRVASSLITMYAKCGSLVDAFQI 390

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           F+   D+ +  W A+I    Q+ +    + LF +M    G+ P+  T  SV+ AC  +  
Sbjct: 391 FEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLR-EGIKPDYITFVSVLSACSHTGR 449

Query: 402 FPDKEGIHGHAIKL-GL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNT 457
             +        IK+ G+  G + Y    ++D+ SR G ++ +K   + M ++ D   W  
Sbjct: 450 VEEGFFYFNSMIKVHGIYPGHEHYA--CIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 507

Query: 458 MITGYTICGQHGDALM 473
           +++    C  H + +M
Sbjct: 508 LLSA---CRNHSNLIM 520


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/679 (34%), Positives = 374/679 (55%), Gaps = 58/679 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ +F   + R+  SW+ +V    QN  + EA+   ++M    I  D  +++SVL AC+ 
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 296 LEMLDTGKEIHAYA----LRNDILIDNSFVG---------------------------SA 324
           L  ++ G+ +   A       D+++  S +                            +A
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           ++  YC    ++  + +F  +  K +  WNAMI  Y    +D++A  LF +M  + G  P
Sbjct: 121 MIGAYCG--SLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTL-GHTP 177

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +  T SS++ AC   +   D   +H      G  RD  +QN L+ MY+R G +E ++  F
Sbjct: 178 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYF 237

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             +E ++  +WNTM+  Y    +  DAL L + M              L E      P+ 
Sbjct: 238 YSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNM--------------LLEGF---TPDR 280

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T  +V+  C +L AL +GK IH  +       DV++G+ALV+MYAKCG L  A++ FD 
Sbjct: 281 FTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDG 340

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  ++V++W+ +I A   HG  +E LEL   M  +G     +  NEVT  ++  ACSH G
Sbjct: 341 ISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQG-----IAQNEVTASSVLHACSHGG 395

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
            + EG+D F  +  D+GIE   ++    +DLLGRAG +++A  +++ MP +     A  +
Sbjct: 396 RLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFV-ALVT 454

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLG C++H +V  G+   + +  LEP+    YVLL+N+Y++A  WD    +R+ M++ GV
Sbjct: 455 LLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGV 514

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR-KEGYVPDTSCVLHNVN 803
           +++ GCS IE+ D+I++F  GD S+ ++ ++   LE L  RM+ +EGYVPDT  V H+V+
Sbjct: 515 KRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVS 574

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           +++KE LL  HSEK+A+ FG++ +PPG+T+R+ KNLRVC+DCH   K  SKI  R II+R
Sbjct: 575 DDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVR 634

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF+ G CSCGDYW
Sbjct: 635 DGTRFHHFEGGICSCGDYW 653



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 215/464 (46%), Gaps = 51/464 (10%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  ++EA+  Y EM R +I  D +   +VL A   + D+  G+ +    
Sbjct: 15  SWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKA 74

Query: 104 VKYGYGLSSVTVANTLVNMYGKCG-----------------------------SDMWDVY 134
            + G+    V VA +L++++ KCG                               + D  
Sbjct: 75  EELGFE-KDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSK 133

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
            +F  +  KD VSWN+MIA    +G    A   F  M      P  +T  S+  AC++  
Sbjct: 134 SLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPK 193

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
           R   L  GR +H      G    F M N L++MY + G ++ A+  F S E ++L +WNT
Sbjct: 194 R---LEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNT 250

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH----AYA 309
           ++++ +Q DK  +A+   + M L G  PD  + +SV+ +C+ L  L  GK IH    +  
Sbjct: 251 MLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCG 310

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
              D+++     G+ALV+MY  C  +   ++ FD IS+K +  W+AMI    Q+ + EEA
Sbjct: 311 FEKDVIL-----GTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEA 365

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH---GHAIKLGLGRDRYVQNA 426
           L L   M  + G+  N  T SSV+ AC  S      EGI    G +   G+ RD      
Sbjct: 366 LELSHLM-NLQGIAQNEVTASSVLHAC--SHGGRLYEGIDYFMGLSQDFGIERDEENTVG 422

Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
            +D+  R G ++ ++ +   M  +  VS+  ++T    C  HGD
Sbjct: 423 FIDLLGRAGWLKEAEHVLHTMPFK--VSFVALVTLLGGCKVHGD 464



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 222/501 (44%), Gaps = 63/501 (12%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           +VFDRI +++  SW+ ++    +   +  ALE ++ M+   +   ++TL SV  AC+ L 
Sbjct: 3   QVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLL 62

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK------------------------ 229
               +  GR V   +  +G E +  +  +L+ ++AK                        
Sbjct: 63  ---DVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119

Query: 230 ------LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                  G + D+K+LF + + +D+VSWN ++++ +      +A     +M   G  PD 
Sbjct: 120 AMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDI 179

Query: 284 VSIASVLPACSHLEMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            + +S+L AC+  + L+ G+ +H    A     D  + N+     L+ MY  C  +E  R
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNN-----LISMYTRCGSLESAR 234

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
           R F  I  K++  WN M+  Y Q +  ++AL L+  M  + G  P+  T SSVV +C   
Sbjct: 235 RYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNM-LLEGFTPDRFTFSSVVDSCASL 293

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
            A  + + IH  +   G  +D  +  AL++MY++ G +  +K  FD +  +D VSW+ MI
Sbjct: 294 GALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMI 353

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
                  QHG A          EE    +++ +L         N +T  +VL  C     
Sbjct: 354 AA---SAQHGHA----------EEALELSHLMNLQGIA----QNEVTASSVLHACSHGGR 396

Query: 520 LAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
           L +G +      ++  +  D       +D+  + G L  A  V   MP + + +    ++
Sbjct: 397 LYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLL 456

Query: 578 MAYGMHGEGQEVLELLKNMVA 598
               +HG+ +      K +VA
Sbjct: 457 GGCKVHGDVRRGKAFTKRIVA 477


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 266/742 (35%), Positives = 405/742 (54%), Gaps = 42/742 (5%)

Query: 61   AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
            AI  +  M +S ++       +VL A+  + +L LG  +HA  +K G   S++ V ++LV
Sbjct: 311  AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA-SNIYVGSSLV 369

Query: 121  NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            +MY KC   M    KVF+ + EK+ V WN+MI      G+    +E F  M  S      
Sbjct: 370  SMYSKC-EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428

Query: 181  FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            FT  S+   C+       L +G Q H   ++     N F+ NAL+ MYAK G ++DA+ +
Sbjct: 429  FTFTSLLSTCA---ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485

Query: 240  FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            F+   DRD V+WNTI+ S  Q++   EA    ++M L GI  DG  +AS L AC+H+  L
Sbjct: 486  FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545

Query: 300  DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
              GK++H  +++  +  D    GS+L+DMY  C  ++  R+VF  + +  +   NA+I G
Sbjct: 546  YQGKQVHCLSVKCGLDRD-LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604

Query: 360  YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
            Y QN   EEA++LF +M    G+ P+  T +++V AC + E+       HG   K G   
Sbjct: 605  YSQNNL-EEAVVLFQEML-TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS 662

Query: 420  D-RYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLRE 477
            +  Y+  +L+ MY     +  +  +F ++   +  V W  M++G++  G + +AL   +E
Sbjct: 663  EGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE 722

Query: 478  MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
            M++              + VL   P+  T +TVL  C  LS+L +G+ IH+         
Sbjct: 723  MRH--------------DGVL---PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765

Query: 538  DVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNM 596
            D +  + L+DMYAKCG +  + +VFD M  R NV++WN +I  Y  +G  ++ L++  +M
Sbjct: 766  DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825

Query: 597  VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                 R   + P+E+TF+ +  ACSH+G VS+G  +F  M   YGIE   DH AC+VDLL
Sbjct: 826  -----RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880

Query: 657  GRAGKVEDAYQLI---NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVA 713
            GR G +++A   I   N+ P     A  WSSLLGACRIH +   GEI+A+ L  LEP  +
Sbjct: 881  GRWGYLQEADDFIEAQNLKPD----ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936

Query: 714  SHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSE 773
            S YVLLSNIY+S   W+KA  +RK M++ GV+K PG SWI+     H F AGD SH +  
Sbjct: 937  SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996

Query: 774  QLHGFLENLSERMRKEGYV-PD 794
            ++  FLE+L + M+ +  V PD
Sbjct: 997  KIEMFLEDLYDLMKDDAVVNPD 1018



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 264/563 (46%), Gaps = 68/563 (12%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           + + S++ +  + I P+ F F  VL   A   ++  G+QIH  ++K G   +S      L
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC-GGAL 201

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           V+MY KC   + D  +VF+ I + + V W  + +   + G  + A+  F  M      P 
Sbjct: 202 VDMYAKC-DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
               V+V                             NT+I         +LG++ DA+ L
Sbjct: 261 HLAFVTVI----------------------------NTYI---------RLGKLKDARLL 283

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F      D+V+WN ++S   +      A+ +   M    +K    ++ SVL A   +  L
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           D G  +HA A++   L  N +VGS+LV MY  C ++E   +VF+ + +K    WNAMI G
Sbjct: 344 DLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
           Y  N    + + LF+ M+  +G   +  T +S++  C  S         H   IK  L +
Sbjct: 403 YAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           + +V NAL+DMY++ G +E ++ IF+ M  RD V+WNT+I  Y                 
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV---------------- 505

Query: 480 NMEEEKNRNNVYDLDE--TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
              +++N +  +DL +   +     +   L + L  C  +  L +GK++H  +++  L  
Sbjct: 506 ---QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           D+  GS+L+DMY+KCG +  AR+VF  +P  +V++ N +I  Y  +   +E + L + M+
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEML 621

Query: 598 AEGSRGGEVKPNEVTFIALFAAC 620
             G     V P+E+TF  +  AC
Sbjct: 622 TRG-----VNPSEITFATIVEAC 639



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 291/609 (47%), Gaps = 36/609 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A + +  + +  +++M  S    D+F F ++L   A   DL +G Q H+ ++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K      ++ V N LV+MY KCG+ + D  ++F+R+ ++D V+WN++I +  +      A
Sbjct: 456 KKKLA-KNLFVGNALVDMYAKCGA-LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
            + F+ M    +      L S   AC+++    GL  G+QVH  S++ G + +    ++L
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVH---GLYQGKQVHCLSVKCGLDRDLHTGSSL 570

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G + DA+ +F S  +  +VS N +++  SQN+   EAV+  ++M  RG+ P  
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSE 629

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF- 342
           ++ A+++ AC   E L  G + H    +     +  ++G +L+ MY N R +     +F 
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +  S K I LW  M++G+ QN + EEAL  + +M    G+ P+  T  +V+  C    + 
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSL 748

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            +   IH     L    D    N L+DMY++ G ++ S  +FD+M  R + VSWN++I G
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G   DAL +   M+                      P+ IT + VL  C     ++
Sbjct: 809 YAKNGYAEDALKIFDSMRQSH-----------------IMPDEITFLGVLTACSHAGKVS 851

Query: 522 KGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
            G++I    I    +   V   + +VD+  + G L  A    +   ++ +   W+ ++ A
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
             +HG+     ++   + AE  +  E++P   +   L +    S    E  +   K+  D
Sbjct: 912 CRIHGD-----DIRGEISAE--KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964

Query: 640 YGIEPSPDH 648
            G++  P +
Sbjct: 965 RGVKKVPGY 973



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 274/582 (47%), Gaps = 67/582 (11%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L +GK +H+  +  G   S   + N +V++Y KC    +   K FD + EKD  +WNSM+
Sbjct: 76  LRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSY-AEKQFDFL-EKDVTAWNSML 132

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           +     GK    L +F  +  + + P+ FT   V   C+   R   +  GRQ+H + +++
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCA---RETNVEFGRQIHCSMIKM 189

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E N++   AL+ MYAK  R+ DA+ +F+   D + V W  + S   +     EAV+  
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M   G +PD ++  +V                                    ++ Y  
Sbjct: 250 ERMRDEGHRPDHLAFVTV------------------------------------INTYIR 273

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             +++  R +F  +S   +  WN MI+G+G+   +  A+  F  M + + +    +T+ S
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGS 332

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ A            +H  AIKLGL  + YV ++L+ MYS+  ++E +  +F+ +E ++
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN MI GY   G+    + L  +M        +++ Y++D+          T  ++L
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDM--------KSSGYNIDD---------FTFTSLL 435

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C A   L  G + H+  I+  LA ++ VG+ALVDMYAKCG L  AR++F+ M  R+ +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           TWN II +Y       E  +L K M   G     +  +     +   AC+H   + +G  
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCG-----IVSDGACLASTLKACTHVHGLYQGKQ 550

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           + + +    G++      + ++D+  + G ++DA ++ + +P
Sbjct: 551 V-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/584 (26%), Positives = 284/584 (48%), Gaps = 46/584 (7%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           L+ VTV NT + + GK    + D   +F  ++  D V+WN MI+   + G   +A+E F 
Sbjct: 262 LAFVTVINTYIRL-GK----LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M  S+V+ +  TL SV  A   ++  D   LG  VH  ++++G   N ++ ++L++MY+
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLD---LGLVVHAEAIKLGLASNIYVGSSLVSMYS 373

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K  +++ A  +F++ E+++ V WN ++   + N +  + +     M   G   D  +  S
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C+    L+ G + H+  ++   L  N FVG+ALVDMY  C  +E  R++F+ + D+
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKK-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WN +I  Y Q+E + EA  LF +M  + G+  +   ++S + AC         + +
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLASTLKACTHVHGLYQGKQV 551

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  ++K GL RD +  ++L+DMYS+ G I+ ++ +F  +     VS N +I GY+     
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS----- 606

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIH 527
                      N+EE      V    E + R   P+ IT  T++  C    +L  G + H
Sbjct: 607 ---------QNNLEEA-----VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652

Query: 528 AYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMAYGMHGE 585
               +   +++   +G +L+ MY     +  A  +F +L   ++++ W  ++  +  +G 
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM---DLFYKMKDDYGI 642
            +E L+  K M  +G     V P++ TF+ +   CS    + EG     L + +  D   
Sbjct: 713 YEEALKFYKEMRHDG-----VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             S      ++D+  + G ++ + Q+ + M    +   +W+SL+
Sbjct: 768 LTSN----TLIDMYAKCGDMKGSSQVFDEMRRRSNVV-SWNSLI 806



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 23/436 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   + S  +     EA   +  M    I  D     + LKA   +  L  GKQ+H   
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G     +   ++L++MY KCG  + D  KVF  + E   VS N++IA   +    + 
Sbjct: 556 VKCGLD-RDLHTGSSLIDMYSKCGI-IKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEE 612

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
           A+  F+ ML   V PS  T  ++  AC    + + L LG Q HG   + G      ++  
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEAC---HKPESLTLGTQFHGQITKRGFSSEGEYLGI 669

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           +L+ MY     + +A  LF      + +V W  ++S  SQN  + EA+ F ++M   G+ 
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHA--YALRNDILIDNSFVGSALVDMYCNCREVECG 338
           PD  +  +VL  CS L  L  G+ IH+  + L +D+   +    + L+DMY  C +++  
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL---DELTSNTLIDMYAKCGDMKGS 786

Query: 339 RRVFDFISDK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            +VFD +  +  +  WN++I GY +N Y E+AL +F  M + + + P+  T   V+ AC 
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACS 845

Query: 398 RSEAFPDKEGIHGHAI-KLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
            +    D   I    I + G+  R  +V   ++D+  R G ++ +    +   ++ D   
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVA-CMVDLLGRWGYLQEADDFIEAQNLKPDARL 904

Query: 455 WNTMITGYTICGQHGD 470
           W++++     C  HGD
Sbjct: 905 WSSLLGA---CRIHGD 917



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 201/439 (45%), Gaps = 60/439 (13%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK +H+ +L   I  +   +G+A+VD+Y  C +V    + FDF+ +K +  WN+M++
Sbjct: 76  LRIGKAVHSKSLILGIDSEGR-LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y       + L  F+ + E   ++PN  T S V+  C R         IH   IK+GL 
Sbjct: 134 MYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           R+ Y   AL+DMY++  RI  ++ +F+ +   +TV W  + +GY   G   +A+++   M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 479 QNMEEEKNRNNVYDLDETVLR--------------PKPNSI------------------- 505
           ++     +      +  T +R                P+ +                   
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312

Query: 506 ----------------TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                           TL +VL   G ++ L  G  +HA AI+  LA+++ VGS+LV MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +KC  +  A +VF+ +  +N + WN +I  Y  +GE  +V+EL  +M + G        +
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-----YNID 427

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           + TF +L + C+ S  +  G   F+ +     +  +      +VD+  + G +EDA Q+ 
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486

Query: 670 NMMPPEFDKAGAWSSLLGA 688
             M    +    W++++G+
Sbjct: 487 ERMCDRDNV--TWNTIIGS 503



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 34/323 (10%)

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +H  ++ LG+  +  + NA++D+Y++  ++  ++  FD +E +D  +WN+M++ Y+  
Sbjct: 80  KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSI 138

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G+ G    +LR   ++ E    N ++          PN  T   VL  C   + +  G++
Sbjct: 139 GKPGK---VLRSFVSLFE----NQIF----------PNKFTFSIVLSTCARETNVEFGRQ 181

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   I+  L  +   G ALVDMYAKC  ++ ARRVF+ +   N + W  +   Y   G 
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E + + + M  EG R     P+ + F+ +       G + +   LF +M        S
Sbjct: 242 PEEAVLVFERMRDEGHR-----PDHLAFVTVINTYIRLGKLKDARLLFGEM-------SS 289

Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
           PD  A  V + G   +  +   +            +  S LG+        IG +A  +L
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL----SAIGIVANLDL 345

Query: 706 FLLEPDVASHYVLLSNIYSSAQL 728
            L+    A    L SNIY  + L
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSL 368



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 7/151 (4%)

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  GK +H+ ++   + ++  +G+A+VD+YAKC  +++A + FD +  ++V  WN ++ 
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y   G+  +VL    ++        ++ PN+ TF  + + C+    V  G  +   M  
Sbjct: 134 MYSSIGKPGKVLRSFVSLFEN-----QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI- 187

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
             G+E +      +VD+  +  ++ DA ++ 
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVF 218


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/794 (32%), Positives = 415/794 (52%), Gaps = 43/794 (5%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HAH+V+  +   S+ + NTL+  Y + G       ++ D +   + VS+N +I    R 
Sbjct: 36  VHAHIVR-AHPSPSLFLRNTLLAAYCRLGGH---ARRLLDEMPRTNAVSFNLLIDAYSRA 91

Query: 159 GKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
           G+ + +LE F R    + V    FT  +   ACS   R   LR G+ VH  S+  G    
Sbjct: 92  GQPEASLETFARARRSAGVRADRFTYAAALAACSRAGR---LREGKAVHALSVLEGIAGG 148

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ N+L++MYA+ G +  A+ +F + ++RD VSWN +VS   +     + +     M  
Sbjct: 149 VFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRR 208

Query: 277 RGIKPDGVSIASVLPACSHLE--MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
            GI  +  ++ SV+  C+  +  ++D    +H   ++     D  F+ SA+V MY     
Sbjct: 209 SGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSD-VFLASAMVGMYAKKGA 267

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYD------EEALMLFIKMEEVAGLWPNATT 388
           +     +F  + D  + ++NAMI G  ++E         EAL L+ +++   G+ P   T
Sbjct: 268 LSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQS-RGMEPTEFT 326

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
            SSV+ AC  +      + IHG  +K     D ++ +AL+D+Y   G +E     F  + 
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVP 386

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D V+W  MI+G   C            +QN   E+     ++L    L+P P   T+ 
Sbjct: 387 KQDVVTWTAMISG---C------------VQNELFERALTLFHELLGAGLKPDP--FTIS 429

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +V+  C +L+    G++I  +A ++       +G++ + MYA+ G ++ A R F  M   
Sbjct: 430 SVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESH 489

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           ++++W+ +I ++  HG  ++ L     MV       +V PNE+TF+ +  ACSH G+V E
Sbjct: 490 DIVSWSAVISSHAQHGCARDALRFFNEMV-----DAKVVPNEITFLGVLTACSHGGLVDE 544

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G+  +  MK++Y + P+  H  CVVDLLGRAG++ DA   I       D+   W SLL +
Sbjct: 545 GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRD-SIFHDEPVIWRSLLAS 603

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CRIH+++E G++ A  +  L+P  ++ YV L NIY  A     A  +R  MKE GV+KEP
Sbjct: 604 CRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEP 663

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
           G SWIE    +H F+AGD SH +S  ++  L  +  ++ K     D S    +     ++
Sbjct: 664 GLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKL-TATDASSTKSDDTIRNEQ 722

Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
           + +  HSEKLA+A G+++ P    IRV KNLRVC DCH   K ISK E REI+LRD  RF
Sbjct: 723 SWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRF 782

Query: 869 HHFKNGTCSCGDYW 882
           HHF++G+CSC DYW
Sbjct: 783 HHFRDGSCSCADYW 796



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/470 (33%), Positives = 243/470 (51%), Gaps = 30/470 (6%)

Query: 53  ARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           +R+ Q   ++ ++    RS  ++ D F + A L A +    L  GK +HA  V  G    
Sbjct: 89  SRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIA-G 147

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V V+N+LV+MY +CG DM    +VFD   E+D VSWN++++   R G  D  L  F MM
Sbjct: 148 GVFVSNSLVSMYARCG-DMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMM 206

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
             S +  +SF L SV   C+  S    + +   VHG  ++ G + + F+ +A++ MYAK 
Sbjct: 207 RRSGIGLNSFALGSVIKCCAG-SDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKK 265

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN------DKFLEAVMFLRQMALRGIKPDGV 284
           G + +A  LFKS  D ++V +N +++ L ++      D   EA+    ++  RG++P   
Sbjct: 266 GALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEF 325

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           + +SV+ AC+    ++ GK+IH   L++    D+ F+GSAL+D+Y N   +E G R F  
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD-FIGSALIDLYLNSGCMEDGFRCFTS 384

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  W AMI+G  QNE  E AL LF ++   AGL P+  T+SSV+ AC        
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALTLFHELLG-AGLKPDPFTISSVMNACASLAVART 443

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            E I   A K G GR   + N+ + MY+R G +  +   F +ME  D VSW+ +I+ +  
Sbjct: 444 GEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQ 503

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
            G   DAL    EM              +D  V+   PN IT + VL  C
Sbjct: 504 HGCARDALRFFNEM--------------VDAKVV---PNEITFLGVLTAC 536



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 42/444 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQD--LSLGKQIHA 101
           SW   +    R+    + +  +  M RS I  ++FA  +V+K  AG  D  + +   +H 
Sbjct: 182 SWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHG 241

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            VVK G+  S V +A+ +V MY K G+ + +   +F  + + + V +N+MIA LCR  + 
Sbjct: 242 CVVKAGFD-SDVFLASAMVGMYAKKGA-LSEAVALFKSVLDPNVVVFNAMIAGLCR-DEA 298

Query: 162 DLALEAFR--MMLYSNV-----EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VG 213
            +  +  R  + LYS V     EP+ FT  SV  AC NL+    +  G+Q+HG  L+   
Sbjct: 299 AVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRAC-NLA--GDIEFGKQIHGQVLKHCF 355

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           + + FI +AL+ +Y   G ++D    F S   +D+V+W  ++S   QN+ F  A+    +
Sbjct: 356 QGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHE 415

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           +   G+KPD  +I+SV+ AC+ L +  TG++I  +A ++      + +G++ + MY    
Sbjct: 416 LLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG-FGRFTAMGNSCIHMYARSG 474

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           +V    R F  +    I  W+A+I+ + Q+    +AL  F +M + A + PN  T   V+
Sbjct: 475 DVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVD-AKVVPNEITFLGVL 533

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLG-----RDRYVQN-------ALMDMYSRMGRIEISK 441
            AC            HG  +  GL      ++ Y  +        ++D+  R GR+  ++
Sbjct: 534 TACS-----------HGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582

Query: 442 TIFDDMEVRDT-VSWNTMITGYTI 464
               D    D  V W +++    I
Sbjct: 583 AFIRDSIFHDEPVIWRSLLASCRI 606


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/604 (37%), Positives = 350/604 (57%), Gaps = 31/604 (5%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRN-DILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           SI+  L AC     L+ G+++H + LR+ + +++N  + + L+ +Y  C  V   RRVF 
Sbjct: 72  SISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ 131

Query: 344 FISDKKIA---LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
            I D+K     +W AM  GY +N +  EAL+L+  M     + P     S  + AC   +
Sbjct: 132 -IDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCC-VKPGNFAFSMALKACSDLD 189

Query: 401 AFPDKEGIHGHAIKLGLGR-DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459
                  IH   +K  +G  D+ V NAL+ +Y  +G  +    +F++M  R+ VSWNT+I
Sbjct: 190 NALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLI 249

Query: 460 TGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519
            G+   G+  + L   R MQ       R  +            + ITL T+LP C  ++A
Sbjct: 250 AGFAGQGRVFETLSAFRVMQ-------REGM----------GFSWITLTTMLPVCAQVTA 292

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           L  GKEIH   +++    DV + ++L+DMYAKCG + +  +VFD M  +++ +WN ++  
Sbjct: 293 LHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAG 352

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
           + ++G+  E L L   M+  G     ++PN +TF+AL + CSHSG+ SEG  LF  +  D
Sbjct: 353 FSINGQIHEALCLFDEMIRYG-----IEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQD 407

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
           +G++PS +HYAC+VD+LGR+GK ++A  +   +P        W SLL +CR++ NV + E
Sbjct: 408 FGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMR-PSGSIWGSLLNSCRLYGNVALAE 466

Query: 700 IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
           + A+ LF +EP+   +YV+LSNIY++A +W+    VR+ M   G++K+ GCSWI+   +I
Sbjct: 467 VVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKI 526

Query: 760 HKFLAGDGS-HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
           H F+AG  S  + S +       LS  ++  GYVP+T  VLH++NEE K   +C HSE+L
Sbjct: 527 HTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERL 586

Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
           A  F ++NT  G  IR+ KNLRVC DCH   K +SK+  R I+LRD  RFHHF+NG+CSC
Sbjct: 587 AAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSC 646

Query: 879 GDYW 882
            DYW
Sbjct: 647 KDYW 650



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 202/414 (48%), Gaps = 13/414 (3%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVK-YGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRI 140
           L A    + L  G+++H H+++     L + T+   L+ +Y  CG  ++   V+++ D  
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR 200
             ++ V W +M     R G    AL  +R ML   V+P +F       ACS+L   D   
Sbjct: 137 PPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDL---DNAL 192

Query: 201 LGRQVHGNSLR--VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           +GR +H   ++  VGE +  + NAL+ +Y ++G  D+   +F+    R++VSWNT+++  
Sbjct: 193 VGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGF 252

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           +   +  E +   R M   G+    +++ ++LP C+ +  L +GKEIH   L++    D 
Sbjct: 253 AGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADV 312

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
             + S L+DMY  C E+    +VFD +  K +  WN M+ G+  N    EAL LF +M  
Sbjct: 313 PLLNS-LMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIR 371

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRI 437
             G+ PN  T  +++  C  S    + + +  + ++  G+         L+D+  R G+ 
Sbjct: 372 Y-GIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKF 430

Query: 438 EISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           + + ++ +++ +R + S W +++    + G    A ++   +  +E     N V
Sbjct: 431 DEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYV 484


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/719 (34%), Positives = 386/719 (53%), Gaps = 36/719 (5%)

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAM 226
           +R ML     P  FT   V   C+ L    GL  GR  HG  +++G E + +  N+L+A 
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLG---GLDEGRAAHGMVIKLGLEHDVYTCNSLVAF 151

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGV 284
           YAKLG V+DA+ +F     RD+V+WN +V     N     A+   ++M  AL  ++ D V
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALE-VQHDSV 210

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
            I + L AC        GKEIH Y +R+ +  D   VG++L+DMYC C EV   R VF  
Sbjct: 211 GIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIK-VGTSLLDMYCKCGEVAYARSVFAT 269

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +  + +  WN MI GY  NE  +EA   F++M    GL     T  +++ AC ++E+   
Sbjct: 270 MPLRTVVTWNCMIGGYALNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQTESSLY 328

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
              +HG+ ++        ++ AL++MY ++G++E S+ IF  +  +  VSWN MI  Y  
Sbjct: 329 GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMY 388

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
              + +A+ L  E+ N         +Y          P+  T+ TV+P    L +L   +
Sbjct: 389 KEMYTEAITLFLELLN-------QPLY----------PDYFTMSTVVPAFVLLGSLRHCR 431

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           +IH+Y I    A + ++ +A++ MYA+ G +  +R +FD M  ++VI+WN +IM Y +HG
Sbjct: 432 QIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHG 491

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
           +G+  LE+   M   G     ++PNE TF+++  ACS SG+V EG   F  M  +YG+ P
Sbjct: 492 QGKTALEMFDEMKYNG-----LQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIP 546

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             +HY C+ DLLGR G + +  Q I  MP +   +  W SLL A R   +++I E AA+ 
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPID-PTSRVWGSLLTASRNQNDIDIAEYAAER 605

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +F LE D    Y++LS++Y+ A  W+    VR  MKE G+R+    S +E       F  
Sbjct: 606 IFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFAN 665

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG-HSEKLAIAFG 823
           GD SH QS  +H   + LS ++++     DT    + V    + T +   HS +LA+ FG
Sbjct: 666 GDMSHSQSRTIHEVSDILSRKIKE---TDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFG 722

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++++  G+ I V KN+R+CN CH A K IS+   R I++ D + +H F +G+C CGDYW
Sbjct: 723 LISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 251/530 (47%), Gaps = 56/530 (10%)

Query: 25  PATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILS-------------------- 64
           PAT+    P    +    +S + SL +E R ++  EA+ +                    
Sbjct: 27  PATSKEPPPRLPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAG 86

Query: 65  --------YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
                   Y  M     +PD F FP V+K  A +  L  G+  H  V+K G     V   
Sbjct: 87  LPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLE-HDVYTC 145

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-N 175
           N+LV  Y K G  + D  +VFD +  +D V+WN M+      G   LAL  F+ M  +  
Sbjct: 146 NSLVAFYAKLGL-VEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALE 204

Query: 176 VEPSSFTLV-SVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRV 233
           V+  S  ++ ++A  C   S       G+++HG  +R G E +  +  +L+ MY K G V
Sbjct: 205 VQHDSVGIIAALAACCLEFSSMQ----GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEV 260

Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
             A+++F +   R +V+WN ++   + N++  EA     QM   G++ + V+  ++L AC
Sbjct: 261 AYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC 320

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
           +  E    G+ +H Y +R   L  +  + +AL++MY    +VE   ++F  I++K +  W
Sbjct: 321 AQTESSLYGRSVHGYVVRRQFL-PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSW 379

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N MI  Y   E   EA+ LF+++     L+P+  TMS+VVPA V   +      IH + I
Sbjct: 380 NNMIAAYMYKEMYTEAITLFLELLN-QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
            LG   +  + NA++ MY+R G +  S+ IFD M  +D +SWNTMI GY I GQ   AL 
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALE 498

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
           +  EM+        N +          +PN  T ++VL  C     + +G
Sbjct: 499 MFDEMK-------YNGL----------QPNESTFVSVLTACSVSGLVDEG 531



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 27/338 (7%)

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
           L N MI G+        AL  +  M E  G  P+  T   VV  C R     +    HG 
Sbjct: 74  LHNVMIRGFADAGLPAGALAAYRGMLE-DGARPDRFTFPVVVKCCARLGGLDEGRAAHGM 132

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
            IKLGL  D Y  N+L+  Y+++G +E ++ +FD M VRD V+WN M+ GY   G    A
Sbjct: 133 VIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLA 192

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           L   +EM +  E ++                +S+ ++  L  C    +  +GKEIH Y I
Sbjct: 193 LACFQEMHDALEVQH----------------DSVGIIAALAACCLEFSSMQGKEIHGYVI 236

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R+ L  D+ VG++L+DMY KCG + +AR VF  MP+R V+TWN +I  Y ++    E  +
Sbjct: 237 RHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFD 296

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYA 650
               M AEG     ++   VT I L AAC+ +     G  +  Y ++  +   P      
Sbjct: 297 CFMQMRAEG-----LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF--LPHVVLET 349

Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
            ++++ G+ GKVE + ++   +  +     +W++++ A
Sbjct: 350 ALLEMYGKVGKVESSEKIFGKIANK--TLVSWNNMIAA 385


>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Brachypodium distachyon]
          Length = 610

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 327/574 (56%), Gaps = 23/574 (4%)

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           LV  Y   R +   R +FD    + + L+++++     +E  E  L L  +M     L P
Sbjct: 44  LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +   ++S+  A  R  +    + +HGH +      D  V+++L+DMY + G  + ++ +F
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREM----------------QNMEEEKNRN 488
           D +  +++V W  +I+GY + G+  +AL L R M                ++ E      
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVK 223

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
              D+    +    ++  L + + G   L+A   G+++H+  +R   ++ ++VG+A+VDM
Sbjct: 224 LFVDMRRDGVSID-DAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDM 282

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y+KC  ++ AR VF+ +  R++I+W  +++    HG  +E   L   MV  G     VKP
Sbjct: 283 YSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAG-----VKP 337

Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
           NEVTF+ L  ACSH+G+V +G  LF  MK +YGI P   HY C +DLL R+G + +A +L
Sbjct: 338 NEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEEL 397

Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
           I  MP   D+A  W+SLL AC+ + N E+    A NL  L P   S YVLLSN+Y+    
Sbjct: 398 ITTMPYVPDEA-TWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGK 456

Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           WD    VRK M +M +RKEPG SWIE G E   F AG+      E++ GFLE L   MR+
Sbjct: 457 WDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQ 516

Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
            GYVPDTS V+H++ E EKE  LC HSE+LA+AFGIL +P G+ IRV KNLRVCNDCH  
Sbjct: 517 RGYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTV 576

Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KFIS+I  R+II+RD  RFHHF+ G CSC ++W
Sbjct: 577 MKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 36/265 (13%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           ++PD+F   ++  A A ++ L LGKQ+H H V   Y    V V ++L++MY KCG    D
Sbjct: 101 LRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDV-VKSSLIDMYCKCGVPD-D 158

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM----------LYSNVEPSSFT 182
             KVFD I  K+ V W ++I+     G+ D ALE FR M          L S    S  +
Sbjct: 159 ARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGES 218

Query: 183 LVSVALACSNLSRRDGLR---------------------LGRQVHGNSLRVGEWNTFIM- 220
           + +V L      RRDG+                      LGRQ+H  ++R+G  ++ I+ 
Sbjct: 219 VSAVKLFVDM--RRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVG 276

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           NA++ MY+K   +  A+ +F+    RD++SW T++   +Q+ +  EA     +M L G+K
Sbjct: 277 NAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVK 336

Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
           P+ V+   ++ ACSH  ++  G+++
Sbjct: 337 PNEVTFVGLIYACSHAGLVQKGRQL 361



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 201/464 (43%), Gaps = 67/464 (14%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKP 281
           L++ YAK   + D + LF     RDL  ++++++++S ++     +  LR+M +   ++P
Sbjct: 44  LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
           D   +AS+  A + L  L  GK++H + + +    D+  V S+L+DMYC C   +  R+V
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDD-VVKSSLIDMYCKCGVPDDARKV 162

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-------------------EEVAGL 382
           FD I  K   +W A+I+GY  N   +EAL LF  M                   E V+ +
Sbjct: 163 FDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAV 222

Query: 383 ------------WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
                         +A  +SS +       A      +H   ++LG      V NA++DM
Sbjct: 223 KLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDM 282

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           YS+   I  ++ +F+++  RD +SW TM+ G     QHG A             +   ++
Sbjct: 283 YSKCSDIHSAREVFEEITGRDIISWTTMLVGE---AQHGRA-------------EEAFSL 326

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-----AYAIRNMLATDVVVGSAL 545
           YD    +   KPN +T + ++  C     + KG+++       Y I   L       +  
Sbjct: 327 YD-RMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQH----YTCY 381

Query: 546 VDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           +D+ ++ G L  A  +   MP V +  TW  ++ A   +   +  + +  N++       
Sbjct: 382 LDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLL------- 434

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
           E++P   +   L +         + +D   K+  D  I   P +
Sbjct: 435 ELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGY 478



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 29/233 (12%)

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H   IK GL +       L+  Y++   +  ++ +FD+   RD   +++++   +     
Sbjct: 26  HARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESP 85

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
              L LLR M              L    LRP  +   L ++      L +L  GK++H 
Sbjct: 86  ELVLPLLRRM--------------LSADALRP--DHFVLASIASATARLRSLCLGKQLHG 129

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           + + +  ++D VV S+L+DMY KCG  + AR+VFD +  +N + W  +I  Y ++G   E
Sbjct: 130 HFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDE 189

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTF--IALFAACSHSGMVSEGMDLFYKMKDD 639
            LEL ++M           P    F   AL +    SG     + LF  M+ D
Sbjct: 190 ALELFRSM-----------PGRTLFAWTALISGFVRSGESVSAVKLFVDMRRD 231


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/563 (38%), Positives = 337/563 (59%), Gaps = 29/563 (5%)

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           F+ + L++MY     +   + VFD + D+ +  W  MI+ Y   + +++AL   + M   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLR- 59

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
            G+ PN  T SSV+ AC   +   +   +H   IK+GL  D +V++AL+D+YSR G +E 
Sbjct: 60  EGVRPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +  +FD+M   D V W+++I G+       +AL L + M+       +            
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQT----------- 165

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
                 TL +VL  C  L+ L  G+++H + ++     D+++ +AL+DMY KCG L  A 
Sbjct: 166 ------TLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDAN 217

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
            VF  M  ++VI+W+ +I     +G  +E L+L ++M   G     +KPN VT + +  A
Sbjct: 218 AVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG-----IKPNYVTIVGVLFA 272

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
           CSH+G+V EG+  F+ MK+ +GI+P  +HY C++DLLGRAG++ +A  LIN M  E D A
Sbjct: 273 CSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPD-A 331

Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
             W +LL ACR+H+NV++   AA+ +  L+P  A  YVLLSNIY++ Q W+   +VR+ M
Sbjct: 332 VTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTM 391

Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
              G++KEPGCSWIE   +IH F+ GD SH Q  +++  L  L  ++   GYVPDT+ VL
Sbjct: 392 TNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVL 451

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
            ++  E+ +  L  HSEKLAI FG+++ P G TIR+ KNLR+C DCH  TK ++K+E R 
Sbjct: 452 QDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRI 511

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I++RD  R+HHF++G CSCGD+W
Sbjct: 512 IVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 194/352 (55%), Gaps = 22/352 (6%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N L+NMY K G  + D   VFD++ +++ VSW +MI+        D ALE   +ML   V
Sbjct: 4   NILINMYVKFGL-LHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGV 62

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
            P+ FT  SV  AC      DGL   RQ+H   +++G + + F+ +AL+ +Y++ G +++
Sbjct: 63  RPNMFTYSSVLRAC------DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F      DLV W++I++  +QN    EA+   ++M   G      ++ SVL AC+ 
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L +L+ G+++H + L+ D    +  + +AL+DMYC C  +E    VF  + +K +  W+ 
Sbjct: 177 LALLELGRQVHVHVLKYD---QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWST 233

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI-HGHAIK 414
           MI G  QN Y +EAL LF  M +V G+ PN  T+  V+ AC  S A   +EG+ + H++K
Sbjct: 234 MIAGLAQNGYSKEALKLFESM-KVLGIKPNYVTIVGVLFAC--SHAGLVEEGLYYFHSMK 290

Query: 415 --LGL--GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
              G+  GR+ Y    ++D+  R GR+  +  + ++ME   D V+W  ++  
Sbjct: 291 ELFGIDPGREHY--GCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 190/372 (51%), Gaps = 34/372 (9%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ---NDKFLEAVMFLRQM 274
           F++N L+ MY K G + DA+ +F    DR++VSW T++S+ S    NDK LE   FL  M
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALE---FLVLM 57

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G++P+  + +SVL AC  L  L   +++H   ++   L  + FV SAL+D+Y    E
Sbjct: 58  LREGVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIG-LDSDVFVRSALIDVYSRWGE 113

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +E   RVFD +    + +W+++I G+ QN   +EAL LF +M+  AG     TT++SV+ 
Sbjct: 114 LENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKR-AGFLAQQTTLTSVLR 172

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           AC           +H H +K    +D  + NAL+DMY + G +E +  +F  M  +D +S
Sbjct: 173 ACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVIS 230

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W+TMI G    G   +AL L   M+                 VL  KPN +T++ VL  C
Sbjct: 231 WSTMIAGLAQNGYSKEALKLFESMK-----------------VLGIKPNYVTIVGVLFAC 273

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVI 571
                + +G   + ++++ +   D        ++D+  + G L+ A  + + M    + +
Sbjct: 274 SHAGLVEEGL-YYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAV 332

Query: 572 TWNVIIMAYGMH 583
           TW  ++ A  +H
Sbjct: 333 TWRALLNACRVH 344



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 145/259 (55%), Gaps = 9/259 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + +    +A+   + M R  ++P+ F + +VL+A  G+ +L   +Q+H  +
Sbjct: 33  SWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL---RQLHCCI 89

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S V V + L+++Y + G ++ +  +VFD +   D V W+S+IA   +    D 
Sbjct: 90  IKIGLD-SDVFVRSALIDVYSRWG-ELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDE 147

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           AL  F+ M  +       TL SV  AC+ L+    L LGRQVH + L+  + +  + NAL
Sbjct: 148 ALRLFKRMKRAGFLAQQTTLTSVLRACTGLAL---LELGRQVHVHVLKYDQ-DLILNNAL 203

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY K G ++DA  +F    ++D++SW+T+++ L+QN    EA+     M + GIKP+ 
Sbjct: 204 LDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNY 263

Query: 284 VSIASVLPACSHLEMLDTG 302
           V+I  VL ACSH  +++ G
Sbjct: 264 VTIVGVLFACSHAGLVEEG 282


>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
 gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
          Length = 606

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/588 (38%), Positives = 348/588 (59%), Gaps = 30/588 (5%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYC----NCREVECGRRVFDFISDKKIALWN 354
           L+  K++H   L+  + +D SF  S+++        N  +  C   +F  + +     +N
Sbjct: 45  LEEFKQVHVQILKFGLFLD-SFCSSSVLATCALSDWNSMDYACS--IFQQLDEPTTFDFN 101

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
            MI GY  N   E A+ L+  M +   + P+  T   V+ AC R     +   IHGH  K
Sbjct: 102 TMIRGYVNNMNFENAIYLYNDMLQ-REVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFK 160

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
           LGL  D YVQN+L++MY +   IE+S  IF  ME +   SW+ +I  +       + L L
Sbjct: 161 LGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLAL 220

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             +M       +R   +  +E++L         + VL  C  L A   G+  H   ++N+
Sbjct: 221 FEDM-------SREGCWRAEESIL---------VNVLSACTHLGAFHLGRCAHGSLLKNI 264

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
              +V V ++L+DMY KCG L     +F  M  +N ++++VII   G+HG G++ L++  
Sbjct: 265 TELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFS 324

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            MV EG     ++P++VT++++ +ACSHSG+V EG+DLF KMK +Y IEP+  HY C+VD
Sbjct: 325 EMVEEG-----LEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVD 379

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           L GRAG +E+A+QL+  MP + +    W SLL AC++H N+++GEIAA+NLF L     S
Sbjct: 380 LKGRAGLLEEAFQLVQSMPIKANDV-LWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPS 438

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            Y++LSN+Y+ AQ W+ A  +R KM   G+ + PG S +E   +++KF++ D S+ +S  
Sbjct: 439 DYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGN 498

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  +  +  ++R EGY+PDTS V+ +V+EEEK   L GHS+KLAIAF +++T  G+ IR
Sbjct: 499 IYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIR 558

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +NLR+CNDCH  TK +S I  REI +RD  RFHHFK+G CSC DYW
Sbjct: 559 IIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 7/259 (2%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R    +  F  AI  Y +M + +++PDNF +P VLKA A +  +  G QIH HV K G 
Sbjct: 104 IRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGL 163

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
               V V N+L+NMYGKC  D+     +F R+ +K   SW+++IA       W   L  F
Sbjct: 164 E-DDVYVQNSLINMYGKC-RDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALF 221

Query: 169 RMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAM 226
             M            LV+V  AC++L       LGR  HG+ L+ + E N  +M +LM M
Sbjct: 222 EDMSREGCWRAEESILVNVLSACTHLG---AFHLGRCAHGSLLKNITELNVAVMTSLMDM 278

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y K G +     LF++   ++ +S++ I+S L  +    +A+    +M   G++PD V+ 
Sbjct: 279 YVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTY 338

Query: 287 ASVLPACSHLEMLDTGKEI 305
            SVL ACSH  ++D G ++
Sbjct: 339 VSVLSACSHSGLVDEGLDL 357



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 19/384 (4%)

Query: 87  VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD----VYKVFDRITE 142
           V   + L   KQ+H  ++K+G  L S   ++ L      C    W+       +F ++ E
Sbjct: 39  VKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVL----ATCALSDWNSMDYACSIFQQLDE 94

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
                +N+MI        ++ A+  +  ML   VEP +FT   V  AC+ L+    ++ G
Sbjct: 95  PTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAV---IQEG 151

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            Q+HG+  ++G E + ++ N+L+ MY K   ++ +  +F+  E + + SW+ I+++ +  
Sbjct: 152 MQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASL 211

Query: 262 DKFLEAVMFLRQMALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
             + E +     M+  G  + +   + +VL AC+HL     G+  H   L+N I   N  
Sbjct: 212 AMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKN-ITELNVA 270

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           V ++L+DMY  C  ++ G  +F  ++ K    ++ +I+G G + Y  +AL +F +M E  
Sbjct: 271 VMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVE-E 329

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMGRIE 438
           GL P+  T  SV+ AC  S    +   +    +K     +  +Q+   ++D+  R G +E
Sbjct: 330 GLEPDDVTYVSVLSACSHSGLVDEGLDLFD-KMKFEYRIEPTMQHYGCMVDLKGRAGLLE 388

Query: 439 ISKTIFDDMEVR-DTVSWNTMITG 461
            +  +   M ++ + V W ++++ 
Sbjct: 389 EAFQLVQSMPIKANDVLWRSLLSA 412



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 181/387 (46%), Gaps = 25/387 (6%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +QVH   L+ G + ++F  ++++A  A      +D A ++F+  ++     +NT++    
Sbjct: 49  KQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYV 108

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
            N  F  A+     M  R ++PD  +   VL AC+ L ++  G +IH +  +   L D+ 
Sbjct: 109 NNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLG-LEDDV 167

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
           +V ++L++MY  CR++E    +F  +  K +A W+A+I  +       E L LF  M   
Sbjct: 168 YVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSR- 226

Query: 380 AGLW-PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            G W    + + +V+ AC    AF      HG  +K     +  V  +LMDMY + G ++
Sbjct: 227 EGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQ 286

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
               +F +M  ++ +S++ +I+G  + G    AL +  EM              ++E + 
Sbjct: 287 KGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEM--------------VEEGL- 331

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIH-AYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
             +P+ +T ++VL  C     + +G ++         +   +     +VD+  + G L  
Sbjct: 332 --EPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEE 389

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMH 583
           A ++   MP++ N + W  ++ A  +H
Sbjct: 390 AFQLVQSMPIKANDVLWRSLLSACKVH 416


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/621 (37%), Positives = 354/621 (57%), Gaps = 63/621 (10%)

Query: 297 EMLDTGKEIHAYALRNDILIDNSF--VGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           + +D   +IHA  LR+++L+   +  +   L   Y +  ++     +F    D  + L+ 
Sbjct: 40  QSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFT 99

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHA 412
           A I     N   ++A +L++++   + + PN  T SS++ +C        K G  IH H 
Sbjct: 100 AAINTASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC------STKSGKLIHTHV 152

Query: 413 IKLGLGRDRYVQNALMDMYSR-------------------------------MGRIEISK 441
           +K GLG D YV   L+D+Y++                                G +E ++
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 212

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD M  RD VSWN MI GY   G   DALML +++  + E K              PK
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL--LAEGK--------------PK 256

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P+ IT++  L  C  + AL  G+ IH +   + +  +V V + L+DMY+KCG L  A  V
Sbjct: 257 PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLV 316

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+  P ++++ WN +I  Y MHG  Q+ L L   M  +G  G  ++P ++TFI    AC+
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM--QGITG--LQPTDITFIGTLQACA 372

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G+V+EG+ +F  M  +YGI+P  +HY C+V LLGRAG+++ AY+ I  M  + D    
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV-L 431

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           WSS+LG+C++H +  +G+  A+ L  L    +  YVLLSNIY+S   ++    VR  MKE
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKE 491

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
            G+ KEPG S IE  +++H+F AGD  H +S++++  L  +SER++  GYVP+T+ VL +
Sbjct: 492 KGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQD 551

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREII 861
           + E EKE  L  HSE+LAIA+G+++T PG+ +++ KNLRVC+DCH  TK ISKI  R+I+
Sbjct: 552 LEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIV 611

Query: 862 LRDVRRFHHFKNGTCSCGDYW 882
           +RD  RFHHF +G+CSCGD+W
Sbjct: 612 MRDRNRFHHFTDGSCSCGDFW 632



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 188/417 (45%), Gaps = 57/417 (13%)

Query: 98  QIHAHVVKYGYGLSS-VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           QIHA ++++   L     V N  ++        +     +F +  + D   + + I T  
Sbjct: 47  QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--- 213
             G  D A   +  +L S + P+ FT  S+  +CS  S       G+ +H + L+ G   
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS-------GKLIHTHVLKFGLGI 159

Query: 214 -----------------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
                                        E +     A++  YAK G V+ A+ LF S  
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219

Query: 245 DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGK 303
           +RD+VSWN ++   +Q+    +A+M  +++   G  KPD +++ + L ACS +  L+TG+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
            IH +   + I + N  V + L+DMY  C  +E    VF+    K I  WNAMI GY  +
Sbjct: 280 WIHVFVKSSRIRL-NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            Y ++AL LF +M+ + GL P   T    + AC  +      EGI    I   +G++  +
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV--NEGIR---IFESMGQEYGI 393

Query: 424 Q------NALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALM 473
           +        L+ +  R G+++ +     +M +  D+V W++++     C  HGD ++
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS---CKLHGDFVL 447



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 173/407 (42%), Gaps = 65/407 (15%)

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YA  G++  +  LF    D DL  +   +++ S N    +A +   Q+    I P+  + 
Sbjct: 74  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY----------------- 329
           +S+L +CS      +GK IH + L+  + ID  +V + LVD+Y                 
Sbjct: 134 SSLLKSCS----TKSGKLIHTHVLKFGLGID-PYVATGLVDVYAKGGDVVSAQKVFDRMP 188

Query: 330 ------------CNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
                       C  ++  VE  R +FD + ++ I  WN MI GY Q+ +  +ALMLF K
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           +       P+  T+ + + AC +  A      IH       +  +  V   L+DMYS+ G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E +  +F+D   +D V+WN MI GY + G   DAL L  EMQ                
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQG--------------- 353

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYA 550
            +   +P  IT +  L  C     + +G  I       Y I+  +         LV +  
Sbjct: 354 -ITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLG 408

Query: 551 KCGCLNFARRVFDLMPV-RNVITWNVIIMAYGMHGE---GQEVLELL 593
           + G L  A      M +  + + W+ ++ +  +HG+   G+E+ E L
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 45/281 (16%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A L Y+++  S+I P+ F F ++LK+ +       GK IH HV+K+G G+    VA  L
Sbjct: 113 QAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPY-VATGL 167

Query: 120 VNMYGKCGSDMWDVYKVFDRIT-------------------------------EKDQVSW 148
           V++Y K G D+    KVFDR+                                E+D VSW
Sbjct: 168 VDVYAK-GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226

Query: 149 NSMIATLCRFGKWDLALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH- 206
           N MI    + G  + AL  F+ +L     +P   T+V+   ACS +     L  GR +H 
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG---ALETGRWIHV 283

Query: 207 -GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
              S R+   N  +   L+ MY+K G +++A  +F     +D+V+WN +++  + +    
Sbjct: 284 FVKSSRI-RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342

Query: 266 EAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +A+    +M  + G++P  ++    L AC+H  +++ G  I
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/654 (36%), Positives = 366/654 (55%), Gaps = 28/654 (4%)

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           + +N+++  LS++ +    ++F +++   G + D +S   +L A S +  L  G E+H +
Sbjct: 80  IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139

Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
           A +   L D  FV + L+DMY  C  +   R VFD +S + +  WN MI  Y +    +E
Sbjct: 140 AFKIATLSD-PFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDE 198

Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
           A  LF +M++ + + P+   + ++V AC R+        I+   I+  +  D ++  AL+
Sbjct: 199 AFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257

Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL--REMQNMEEEKN 486
            MY+  G ++++   F  M VR+      M++GY+  G+  DA ++    EM+++     
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTT 317

Query: 487 RNNVY---DLDETVLRP---------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             + Y   D  +  LR          KP+ +T+++V+  C  L  L K K +H Y   N 
Sbjct: 318 MISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNG 377

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           L + + + +AL++MYAKCG L+ AR VF+ MP RNV++W+ +I A+ MHGE  + L L  
Sbjct: 378 LESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFA 437

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M  E      V+PNEVTF+ +   CSHSG+V EG  +F  M D+Y I P  +HY C+VD
Sbjct: 438 QMKQEN-----VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVD 492

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           L GRA  + +A ++I  MP        W SL+ ACR+H  +E+GE+AA+ +  LEPD   
Sbjct: 493 LFGRANLLREALEVIESMPMA-PNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDG 551

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
             VL+SNIY+    WD    +R  M++  V KE G S I+   + H+FL GD  H+QS +
Sbjct: 552 ALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNE 611

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT--- 831
           ++  L  +  +++  GYVPD   VL +V EEEK+ L+  HSEKLA+ FG++N        
Sbjct: 612 IYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKG 671

Query: 832 ---TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
               IR+ KNLRVC DCH   K +SK+   EII+RD  RFH +K+G CSC DYW
Sbjct: 672 SCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 217/460 (47%), Gaps = 52/460 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           LR  +RS + R  IL Y  +     + D  +FP +LKAV+ +  L  G ++H    K   
Sbjct: 86  LRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIA- 144

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
            LS   V   L++MY  CG   +    VFD ++++D V+WN+MI   CRFG  D A + F
Sbjct: 145 TLSDPFVETGLMDMYAACGRINY-ARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLF 203

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG----NSLRVGEW--------- 215
             M  SNV P    L ++  AC    R   +R  R ++     N +R+            
Sbjct: 204 EEMKDSNVMPDEMILCNIVSACG---RTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMY 260

Query: 216 -------------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
                              N F+  A+++ Y+K GR+DDA+ +F   E +DLV W T++S
Sbjct: 261 AGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMIS 320

Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRN 312
           + +++D   EA+    +M   GIKPD V++ SV+ AC +L  LD  K +H Y     L +
Sbjct: 321 AYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLES 380

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALML 372
            + IDN     AL++MY  C  ++  R VF+ +  + +  W++MI  +  +    ++L L
Sbjct: 381 VLPIDN-----ALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSL 435

Query: 373 FIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMY 431
           F +M++   + PN  T   V+  C  S    + + I      +  +         ++D++
Sbjct: 436 FAQMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLF 494

Query: 432 SRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
            R   +  +  + + M +  + V W ++++    C  HG+
Sbjct: 495 GRANLLREALEVIESMPMAPNVVIWGSLMSA---CRVHGE 531



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 220/475 (46%), Gaps = 54/475 (11%)

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           + + +NS++  L R G+    +  ++ + +       F  +S       +S+   L  G 
Sbjct: 78  ESIVFNSLLRDLSRSGEPRATILFYQRIRHVG---GRFDRISFPPILKAVSKVSALFEGM 134

Query: 204 QVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
           ++HG + ++    + F+   LM MYA  GR++ A+ +F     RD+V+WNT++    +  
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID----- 317
              EA     +M    + PD + + +++ AC     +   + I+ + + ND+ +D     
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLT 254

Query: 318 -------------------------NSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
                                    N FV +A+V  Y     ++  R +FD    K +  
Sbjct: 255 ALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVC 314

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           W  MI+ Y ++++ +EAL +F +M   +G+ P+  TM SV+ ACV        + +H + 
Sbjct: 315 WTTMISAYAESDHPQEALRVFEEMC-CSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
              GL     + NAL++MY++ G ++ ++ +F+ M  R+ VSW++MI  + + G+  D+L
Sbjct: 374 HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSL 433

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L  +M+       + NV          +PN +T + VL GC     + +GK+I A    
Sbjct: 434 SLFAQMK-------QENV----------EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 476

Query: 533 NMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
               T  +     +VD++ +   L  A  V + MP+  NV+ W  ++ A  +HGE
Sbjct: 477 EYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGE 531



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 6/158 (3%)

Query: 38  QTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           QT  K+   W   + + A S+  +EA+  + EM  S I+PD     +V+ A   +  L  
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365

Query: 96  GKQIHAHVVKYGYGLSSV-TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
            K +H +   +  GL SV  + N L+NMY KCG  +     VF+++  ++ VSW+SMI  
Sbjct: 366 AKWVHRYT--HLNGLESVLPIDNALINMYAKCGG-LDAARDVFEKMPTRNVVSWSSMINA 422

Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
               G+   +L  F  M   NVEP+  T V V   CS+
Sbjct: 423 FAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSH 460


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/646 (35%), Positives = 353/646 (54%), Gaps = 80/646 (12%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE--C-GRRVFDF 344
           S+   C  +  L   K+IH+  ++  I I N  + + ++  +C  RE    C  R++FD 
Sbjct: 19  SLFETCKSMYHL---KQIHSRTIKTGI-ICNPIIQNKILS-FCCSREFGDMCYARQLFDT 73

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           I +  +  WN M  GY +    +  + L+++M E   + P+  T   +     RS A   
Sbjct: 74  IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLE-RNVKPDCYTYPFLFKGFTRSVALQL 132

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD------------------- 445
              +H H +K GL  + +  NAL++MYS  G I++++ IFD                   
Sbjct: 133 GRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR 192

Query: 446 -----------------------------DMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
                                         M  RD VSW  MI GY     + +ALML R
Sbjct: 193 IKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFR 252

Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
           EMQ                   + KP+  T+++VL  C  L AL  G+ I  Y  +N + 
Sbjct: 253 EMQTS-----------------KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVK 295

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            D  VG+AL+DMY KCG +  A  +F+ +P R+  TW  +++   ++G G+E L +   M
Sbjct: 296 NDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQM 355

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
           +        V P+EVT++ + +AC+H+GMV EG   F  M   +GIEP+  HY C+VDLL
Sbjct: 356 LK-----ASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLL 410

Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
           G+AG +++A+++I  MP + +    W +LLGACRIH++ E+ E A + +  LEP+  + Y
Sbjct: 411 GKAGHLKEAHEIIKNMPMKPNSI-VWGALLGACRIHKDAEMAERAIEQILELEPNNGAVY 469

Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
           VL  NIY++   WDK  ++R+ M + G++K PGCS IE    +H+F+AGD SH Q+++++
Sbjct: 470 VLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIY 529

Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
           G L  ++  ++  GY P+TS V  ++ EE+KE  +  HSEKLAIAFG++N+ PG TIR+ 
Sbjct: 530 GKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIV 589

Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           KNLR+C DCH   K +SK+  RE+I+RD  RFHHF++G+CSC DYW
Sbjct: 590 KNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 195/449 (43%), Gaps = 60/449 (13%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIH+  +K G   + +     L     +   DM    ++FD I E    SWN M     
Sbjct: 31  KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           R     L +  +  ML  NV+P  +T           +R   L+LGR++H + ++ G + 
Sbjct: 91  RIACPKLGVSLYLEMLERNVKPDCYTY---PFLFKGFTRSVALQLGRELHCHVVKYGLDS 147

Query: 216 NTFIMNALMAMYA----------------------------------------------- 228
           N F  NAL+ MY+                                               
Sbjct: 148 NVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGF 207

Query: 229 -KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
              G+VD A+  F    +RD VSW  ++    + + + EA+M  R+M    IKPD  ++ 
Sbjct: 208 VNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMV 267

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
           SVL AC+ L  L+ G+ I  Y  +N +  +++FVG+AL+DMY  C  VE    +F+ +  
Sbjct: 268 SVLTACAQLGALELGEWIRTYIDKNKVK-NDTFVGNALIDMYFKCGNVEMALSIFNTLPQ 326

Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KE 406
           +    W AM+ G   N   EEAL +F +M + A + P+  T   V+ AC  +    + K+
Sbjct: 327 RDKFTWTAMVVGLAINGCGEEALNMFSQMLK-ASVTPDEVTYVGVLSACTHTGMVDEGKK 385

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTIC 465
                  + G+  +      ++D+  + G ++ +  I  +M ++ +++ W  ++     C
Sbjct: 386 FFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGA---C 442

Query: 466 GQHGDALMLLREM-QNMEEEKNRNNVYDL 493
             H DA M  R + Q +E E N   VY L
Sbjct: 443 RIHKDAEMAERAIEQILELEPNNGAVYVL 471


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/538 (40%), Positives = 325/538 (60%), Gaps = 25/538 (4%)

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
           +S + +  W ++I GY QN+  +EAL L +         PN  T +S++ A   S +   
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGL-LLGMLRGRFKPNGFTFASLLKAAGASASSGI 59

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
            E IH   +K     D YV +AL+DMY+R GR++++  +FD +E ++ VSWN +I G+  
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
            G     L++  EMQ       RN            +    T  +V      + AL +GK
Sbjct: 120 KGDGETTLLMFAEMQ-------RNGF----------EATHFTYSSVFSAIAGIGALEQGK 162

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
            +HA+ I++       VG+ ++DMYAK G +  AR+VFD +  ++++TWN ++ A+  +G
Sbjct: 163 WVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYG 222

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
            G+E +   + M     R   V  N++TF+++  ACSH G+V EG   F  MK+ + +EP
Sbjct: 223 LGREAVTHFEEM-----RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-HNLEP 276

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
             DHY  VVDLLGRAG + DA   I  MP +   A  W +LLG+CR+H+N +IG+ AA +
Sbjct: 277 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMK-PTAAVWGALLGSCRMHKNAKIGQFAADH 335

Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
           +F L+PD     VLL NIY+S   WD A  VRK MK  GV+KEP CSW+E  + +H F+A
Sbjct: 336 VFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVA 395

Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
            D +H +SE+++   E +S ++RK GYVP+T  VL +V+E+E++  L  HSEK+A+AF +
Sbjct: 396 NDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFAL 455

Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +N P G TIR+ KN+R+C DCH A ++ISK+  REI++RD  RFHHF +G+CSCGDYW
Sbjct: 456 INMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 144/268 (53%), Gaps = 8/268 (2%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           TR   SW   +   A+++   EA+   + M R   +P+ F F ++LKA        +G+Q
Sbjct: 3   TRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 62

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           IHA  VKY +    V V + L++MY +CG  DM     VFD++  K+ VSWN++IA   R
Sbjct: 63  IHALTVKYDWH-DDVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFAR 119

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WN 216
            G  +  L  F  M  +  E + FT  SV  A + +     L  G+ VH + ++ GE  +
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG---ALEQGKWVHAHMIKSGERLS 176

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
            F+ N ++ MYAK G + DA+ +F   + +DLV+WN+++++ +Q     EAV    +M  
Sbjct: 177 AFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRK 236

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKE 304
            G+  + ++  S+L ACSH  ++  GK+
Sbjct: 237 CGVHLNQITFLSILTACSHGGLVKEGKQ 264



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 136/259 (52%), Gaps = 8/259 (3%)

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
           ++ +D  SW S+IA   +    D AL     ML    +P+ FT  S+ L  +  S   G+
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASL-LKAAGASASSGI 59

Query: 200 RLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
             G Q+H  +++  +W  + ++ +AL+ MYA+ GR+D A  +F   E ++ VSWN +++ 
Sbjct: 60  --GEQIHALTVKY-DWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAG 116

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
            ++       ++   +M   G +    + +SV  A + +  L+ GK +HA+ +++   + 
Sbjct: 117 FARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL- 175

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           ++FVG+ ++DMY     +   R+VFD +  K +  WN+M+T + Q     EA+  F +M 
Sbjct: 176 SAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR 235

Query: 378 EVAGLWPNATTMSSVVPAC 396
           +  G+  N  T  S++ AC
Sbjct: 236 K-CGVHLNQITFLSILTAC 253


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/684 (34%), Positives = 378/684 (55%), Gaps = 28/684 (4%)

Query: 199 LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           L LG+ VH   +R   ++    N L+A+Y K GR+  A+ +F +   R+ VS N ++S  
Sbjct: 32  LSLGKAVHARVVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGY 91

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           + + +  +A+  LR +A  G+      ++S + A +H+   D G++ H YA++   L ++
Sbjct: 92  ASSGRHRDALALLR-VADFGLNE--YVLSSAVAATAHVRSYDMGRQCHGYAIKAG-LAEH 147

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            +V SA++ MYC C  ++   +VFD +S   +  +N+MI G+      + +  +   M  
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVR 207

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
             G W + + ++ V+  C  ++       +H  A+K  L  + YV +AL+DMY +     
Sbjct: 208 NVGQWDHVSYVA-VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 266

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F+ +  ++ VSW  ++T YT      DAL L  +M+ ME                
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDME-MEG--------------- 310

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             +PN  T    L  C  L+ L  G  + A  ++      + V +AL++MY+K G +  A
Sbjct: 311 -VRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDA 369

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           RRVF  MP R+V++WN II+ Y  HG  +E +E   +M+       E  P+ VTFI + +
Sbjct: 370 RRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLF-----AEEVPSYVTFIGVLS 424

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           AC+  G+V EG      M  + G++P  +HY C+V LL R G++++A + I       D 
Sbjct: 425 ACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDV 484

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
             AW SLL +C++++N  +G   A+ +F L+P     YVLLSN+Y+ A  WD  + VR+ 
Sbjct: 485 V-AWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRL 543

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
           M+E+GVRKEPG SWI+ G E+H F + D  H   EQ+   L+ L ++++  GYVP+ +  
Sbjct: 544 MRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVA 603

Query: 799 LHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESR 858
           LH+V +E+KE  L  HSEKLA+AFG++ TP G  IR+ KN+R+C+DCH A K IS    R
Sbjct: 604 LHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGR 663

Query: 859 EIILRDVRRFHHFKNGTCSCGDYW 882
            I++RD  RFH  ++G CSC DYW
Sbjct: 664 RIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 255/536 (47%), Gaps = 58/536 (10%)

Query: 92  DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
           +LSLGK +HA VV+       V   N L+ +Y KCG  +    +VFD +  ++ VS N +
Sbjct: 31  ELSLGKAVHARVVRAAR--FDVVQYNNLIALYVKCGR-LGLARQVFDAMPSRNPVSGNLL 87

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           ++     G+   AL   R+   ++   + + L S   A +++   D   +GRQ HG +++
Sbjct: 88  MSGYASSGRHRDALALLRV---ADFGLNEYVLSSAVAATAHVRSYD---MGRQCHGYAIK 141

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
            G   + ++ +A++ MY +   +D+A  +F +    ++ ++N++++      +   +   
Sbjct: 142 AGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSI 201

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           +R M     + D VS  +VL  C+  + +  G ++H  AL+  + + N +VGSALVDMY 
Sbjct: 202 VRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLEL-NVYVGSALVDMYG 260

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C       RVF+ + +K I  W A++T Y QNE  E+AL LF+ M E+ G+ PN  T +
Sbjct: 261 KCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDM-EMEGVRPNEFTYA 319

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
             + +C       +   +    +K G      V NALM+MYS+ G +E ++ +F  M  R
Sbjct: 320 VALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR 379

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSWN++I GY   G+  +A+    +M   EE                  P+ +T + V
Sbjct: 380 DVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEE-----------------VPSYVTFIGV 422

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALVDMYAKCGCLNFARRVFDL 564
           L  C  L  + +G     +   N++  +V V       + +V +  + G L+ A R  + 
Sbjct: 423 LSACAQLGLVDEG-----FYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIES 477

Query: 565 MPV-RNVITWNVII---MAYGMHGEGQEVLE--------------LLKNMVAEGSR 602
             +  +V+ W  ++     Y  +G G  V E              LL NM A+ +R
Sbjct: 478 NCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANR 533



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 6/236 (2%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R+  Q D+ ++ AVL   A  +++ LG Q+H   +K    L+ V V + LV+MYGKC 
Sbjct: 205 MVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELN-VYVGSALVDMYGKCD 263

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
               +  +VF+ + EK+ VSW +++    +   ++ AL+ F  M    V P+ FT     
Sbjct: 264 FPH-EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVAL 322

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            +C+ L+    L+ G  +   +++ G W    + NALM MY+K G V+DA+ +F S   R
Sbjct: 323 NSCAGLAT---LKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR 379

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           D+VSWN+I+   + + +  EA+     M      P  V+   VL AC+ L ++D G
Sbjct: 380 DVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 435



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 10/218 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  ++  F +A+  +++M    ++P+ F +   L + AG+  L  G  + A  
Sbjct: 282 SWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACT 341

Query: 104 VKYG-YGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
           +K G +GL  + V N L+NMY K GS + D  +VF  +  +D VSWNS+I      G+  
Sbjct: 342 MKTGHWGL--LPVCNALMNMYSKSGS-VEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAR 398

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG--LRLGRQVHGNSLRVGEWNTFIM 220
            A+EAF  ML++   PS  T + V  AC+ L   D     L   +    ++ G+ +   M
Sbjct: 399 EAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCM 458

Query: 221 NALMAMYAKLGRVDDAKTLFKS-FEDRDLVSWNTIVSS 257
             L+    ++GR+D+A+   +S     D+V+W +++SS
Sbjct: 459 VGLL---CRVGRLDEAERFIESNCIGTDVVAWRSLLSS 493


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/688 (33%), Positives = 381/688 (55%), Gaps = 29/688 (4%)

Query: 199 LRLGRQVHGNSLRVGEW---NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
           L+ G+ +H + +   +    N   +N+L+ +YAK  ++  A+ LF     R++VSW  ++
Sbjct: 41  LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALM 100

Query: 256 SSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +    N   LE +   + M ++  ++P+    A+++ +CS    +  G + H YAL++  
Sbjct: 101 AGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSG- 159

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
           L+ + +V +AL+ MY    +V+    V+  +    +  +N +I G  +N Y  EAL +  
Sbjct: 160 LVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLD 219

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M +   +W N T +++    C   +       +H    + G   D +V +A++DMY + 
Sbjct: 220 RMVDECIVWDNVTYVTAF-GLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKC 278

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G I  ++ +F+ ++ ++ VSW  ++  Y+  G   +AL    EM+             +D
Sbjct: 279 GNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEME-------------VD 325

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
             +    PN  T   +L  C  +SAL  GK +H    ++     ++VG+AL++MY+K G 
Sbjct: 326 GLL----PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGS 381

Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
           +  A +VF  M  R+ ITW+ +I     HG G+E L + + M+A      +  P+ VTF+
Sbjct: 382 IEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLA-----AKECPHYVTFV 436

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
            + +AC+H G V EG     ++    GIEP  +HY C+V LL +AG++++A   +   P 
Sbjct: 437 GVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPV 496

Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
           ++D   AW +LL AC +HQN  +G+  A+ +  ++P     Y+LLSN+Y+ A+ WD  + 
Sbjct: 497 KWDVV-AWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVK 555

Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
           +RK M+E  V+KEPG SWIE  + IH F++   +H +S Q++  ++ L   +R  GYVPD
Sbjct: 556 IRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615

Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
            + V H+V +E+K   +  HSEKLAIA+G++ TP G  IRV KNLR+C DCH A K ISK
Sbjct: 616 IAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISK 675

Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
           + +R II+RD  RFH F +G CSC DYW
Sbjct: 676 VTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 262/526 (49%), Gaps = 39/526 (7%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKV-FDRI 140
           +LK  A  ++L  GK IHAH++        ++   N+L+N+Y KC   M  V ++ FD +
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIM--VARILFDGM 88

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGL 199
            +++ VSW +++A     G     L  F+ M+  + + P+ +   ++  +CS+  +   +
Sbjct: 89  RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQ---V 145

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G Q HG +L+ G  ++ ++ NAL+ MY++   V  A +++      D+ S+N I++ L
Sbjct: 146 VEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGL 205

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            +N    EA+  L +M    I  D V+  +    CSHL+ L  G ++H    R     D 
Sbjct: 206 LENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYD- 264

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           SFV SA++DMY  C  +   R+VF+ +  K +  W A++  Y QN   EEAL  F +M E
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEM-E 323

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           V GL PN  T + ++ +C    A    + +H    K G      V NAL++MYS+ G IE
Sbjct: 324 VDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIE 383

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F +M  RD+++W+ MI G +  G   +AL++ +EM   +E               
Sbjct: 384 AAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKE--------------- 428

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALVDMYAKCGC 554
              P+ +T + VL  C  L ++ +G     Y  + M  T +  G    + +V +  K G 
Sbjct: 429 --CPHYVTFVGVLSACAHLGSVQEG---FYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGR 483

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMH---GEGQEVLELLKNM 596
           L+ A       PV+ +V+ W  ++ A  +H   G G++V EL+  M
Sbjct: 484 LDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+     M    I  DN  +       + ++DL LG Q+H  + + G    S  V++ +
Sbjct: 213 EALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSF-VSSAI 271

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           ++MYGKCG ++ +  KVF+R+  K+ VSW +++A   + G ++ AL  F  M    + P+
Sbjct: 272 IDMYGKCG-NILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            +T   +  +C+ +S    L  G+ +H    + G E +  + NAL+ MY+K G ++ A  
Sbjct: 331 EYTFAVLLNSCAGIS---ALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F     RD ++W+ ++  LS +    EA++  ++M      P  V+   VL AC+HL  
Sbjct: 388 VFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGS 447

Query: 299 LDTG 302
           +  G
Sbjct: 448 VQEG 451



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 118/231 (51%), Gaps = 10/231 (4%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           QT+   SW   L + +++  F EA+  + EM    + P+ + F  +L + AGI  L  GK
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
            +H  + K G+    + V N L+NMY K GS +   +KVF  +  +D ++W++MI  L  
Sbjct: 352 LLHTRIKKSGFE-DHIIVGNALINMYSKSGS-IEAAHKVFLEMICRDSITWSAMICGLSH 409

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL-SRRDGL-RLGRQVHGNSLRVG-E 214
            G    AL  F+ ML +   P   T V V  AC++L S ++G   L + +    +  G E
Sbjct: 410 HGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVE 469

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQNDKF 264
             T I+  L     K GR+D+A+   KS   + D+V+W T++S+   +  +
Sbjct: 470 HYTCIVGLL----CKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/757 (33%), Positives = 418/757 (55%), Gaps = 34/757 (4%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSY-IEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           S  + +E   + + S  +SN +REA+ ++      S  +     + +++ A +  + L+ 
Sbjct: 26  STIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ 85

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G++IH H++       ++ + N +++MYGKCGS + D  +VFD + E++ VS+ S+I   
Sbjct: 86  GRKIHDHILNSNCKYDTI-LNNHILSMYGKCGS-LRDAREVFDFMPERNLVSYTSVITGY 143

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
            + G+   A+  +  ML  ++ P  F   S+  AC++ S    + LG+Q+H   +++   
Sbjct: 144 SQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS---DVGLGKQLHAQVIKLESS 200

Query: 216 NTFI-MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           +  I  NAL+AMY +  ++ DA  +F     +DL+SW++I++  SQ     EA+  L++M
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260

Query: 275 ALRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
              G+  P+     S L ACS L   D G +IH   ++++ L  N+  G +L DMY  C 
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARCG 319

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +   RRVFD I     A WN +I G   N Y +EA+ +F +M   +G  P+A ++ S++
Sbjct: 320 FLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS-SGFIPDAISLRSLL 378

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
            A  +  A      IH + IK G   D  V N+L+ MY+    +     +F+D     D+
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
           VSWNT++T    C QH   + +LR  + M               V   +P+ IT+  +L 
Sbjct: 439 VSWNTILTA---CLQHEQPVEMLRLFKLM--------------LVSECEPDHITMGNLLR 481

Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
           GC  +S+L  G ++H Y+++  LA +  + + L+DMYAKCG L  ARR+FD M  R+V++
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           W+ +I+ Y   G G+E L L K M + G     ++PN VTF+ +  ACSH G+V EG+ L
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAG-----IEPNHVTFVGVLTACSHVGLVEEGLKL 596

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           +  M+ ++GI P+ +H +CVVDLL RAG++ +A + I+ M  E D    W +LL AC+  
Sbjct: 597 YATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV-VWKTLLSACKTQ 655

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            NV + + AA+N+  ++P  ++ +VLL ++++S+  W+ A  +R  MK+  V+K PG SW
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           IE  D+IH F A D  H + + ++  L N+  +M  E
Sbjct: 716 IEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/767 (33%), Positives = 407/767 (53%), Gaps = 40/767 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   L    +   FR+++   +EM R  + PD      +LKA  G++DL+LG QIHA  
Sbjct: 103 SWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVA 162

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G  +  V   + LV+MYGKC S + D  + F  + E++ VSW + IA   +  ++  
Sbjct: 163 VKTGLEMD-VRAGSALVDMYGKCRS-LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTR 220

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF----- 218
            LE F  M    +  S     SV  +C+ ++    L   RQ+H ++++    N F     
Sbjct: 221 GLELFVQMQRLGLGVSQPAYASVFRSCAAIT---CLSTARQLHAHAIK----NKFSADRV 273

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +  A++ +YAK   + DA+  F S  +  + + N ++  L +     EA+   + M   G
Sbjct: 274 VGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSG 333

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I  D VS++ V  AC+ ++    G ++H  A+++   +D   V +A++D+Y  C+ +   
Sbjct: 334 IGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC-VRNAILDLYGKCKALVEA 392

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  +  +    WNA+I    QNE  E+ +    +M    G+ P+  T  SV+ AC  
Sbjct: 393 YLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRY-GMEPDDFTYGSVLKACAG 451

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            ++      +HG AIK GLG D +V + ++DMY + G I  ++ + D +  ++ VSWN++
Sbjct: 452 LQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSI 511

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I+G+++  Q  +A     EM              LD  V   KP+  T  TVL  C  L+
Sbjct: 512 ISGFSLNKQSEEAQKFFSEM--------------LDIGV---KPDHFTYATVLDTCANLA 554

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            +  GK+IH   I+  +  D  + S LVDMYAKCG +  +  +F+     + ++WN +I 
Sbjct: 555 TIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMIC 614

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
            Y +HG+G E LE+ + M     +   V PN  TF+A+  ACSH G++ +G   FY M  
Sbjct: 615 GYALHGQGFEALEMFERM-----QQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTS 669

Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            Y +EP  +H+AC+VD+LGR+   ++A + I  MP E D A  W +LL  C+I Q+VE+ 
Sbjct: 670 RYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEAD-AVIWKTLLSICKIRQDVEVA 728

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
           E AA N+  L+PD +S Y+LLSN+Y+ +  W      R+ M++  ++KEPGCSWIE   E
Sbjct: 729 ETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSE 788

Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
           +H FLAGD  H +S +++  L NL   M+  GY P  S +   V+EE
Sbjct: 789 MHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP-ASALFAEVDEE 834



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 271/545 (49%), Gaps = 27/545 (4%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW  ++    ++ Q+   +  +++M R  +     A+ +V ++ A I  LS 
Sbjct: 196 GMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLST 255

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            +Q+HAH +K  +    V V   +V++Y K  S + D  + F  +      + N+M+  L
Sbjct: 256 ARQLHAHAIKNKFSADRV-VGTAIVDVYAKADS-LVDARRAFFSLPNHTVQACNAMMVGL 313

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R G    AL+ F+ M  S +     +L  V  AC+ +    G   G QVH  +++ G +
Sbjct: 314 VRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVK---GYLQGLQVHCLAIKSGFD 370

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            +  + NA++ +Y K   + +A  +F+  E RD VSWN I+++L QN+ + + + +L +M
Sbjct: 371 VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEM 430

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G++PD  +  SVL AC+ L+ L+ G  +H  A+++ + +D +FV S +VDMYC C  
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLD-AFVSSTVVDMYCKCGM 489

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +   +++ D I  +++  WN++I+G+  N+  EEA   F +M ++ G+ P+  T ++V+ 
Sbjct: 490 ITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDI-GVKPDHFTYATVLD 548

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
            C         + IHG  IK  +  D Y+ + L+DMY++ G +  S  +F+  +  D VS
Sbjct: 549 TCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVS 608

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN MI GY + GQ  +AL +   MQ       + NV           PN  T + VL  C
Sbjct: 609 WNAMICGYALHGQGFEALEMFERMQ-------QANVV----------PNHATFVAVLRAC 651

Query: 515 GALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVIT 572
             +  L  G +  +    R  L   +   + +VD+  +      A +    MP+  + + 
Sbjct: 652 SHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVI 711

Query: 573 WNVII 577
           W  ++
Sbjct: 712 WKTLL 716



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 279/616 (45%), Gaps = 66/616 (10%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L A AG   L+ G+  HA ++  G+ + +  V+N L+ MY +CG        VFD +  +
Sbjct: 11  LCAGAGRSALATGQAAHARMLVSGF-MPTTFVSNCLLQMYARCGGAA-HARGVFDVMPHR 68

Query: 144 DQVSWNSMIATLCRFG------------------KWDLALEAFRM-------------ML 172
           D VSWN+M+      G                   W+  L  +               M 
Sbjct: 69  DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMA 128

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
              V P   TL  +  AC  L   + L LG Q+H  +++ G E +    +AL+ MY K  
Sbjct: 129 RRGVAPDRTTLAVLLKACGGL---EDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCR 185

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            ++DA   F    +R+ VSW   ++   QN+++   +    QM   G+     + ASV  
Sbjct: 186 SLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFR 245

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           +C+ +  L T +++HA+A++N    D   VG+A+VD+Y     +   RR F  + +  + 
Sbjct: 246 SCAAITCLSTARQLHAHAIKNKFSADR-VVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ 304

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
             NAM+ G  +     EAL LF  M   +G+  +  ++S V  AC   + +     +H  
Sbjct: 305 ACNAMMVGLVRTGLGAEALQLFQFMTR-SGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
           AIK G   D  V+NA++D+Y +   +  +  +F +ME RD+VSWN +I        + D 
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423

Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
           +  L EM     E                 P+  T  +VL  C  L +L  G  +H  AI
Sbjct: 424 IAYLNEMLRYGME-----------------PDDFTYGSVLKACAGLQSLEYGSVVHGKAI 466

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           ++ L  D  V S +VDMY KCG +  A+++ D +  + +++WN II  + ++ + +E  +
Sbjct: 467 KSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQK 526

Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHY-- 649
               M+  G     VKP+  T+  +   C++   +  G  +  ++      E   D Y  
Sbjct: 527 FFSEMLDIG-----VKPDHFTYATVLDTCANLATIELGKQIHGQIIKQ---EMLGDEYIS 578

Query: 650 ACVVDLLGRAGKVEDA 665
           + +VD+  + G + D+
Sbjct: 579 STLVDMYAKCGNMPDS 594



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 251/540 (46%), Gaps = 45/540 (8%)

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYA 228
           ML S   P++F         SN   +   R G   H   +   +   +T   N ++  YA
Sbjct: 30  MLVSGFMPTTFV--------SNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYA 81

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
             G    A +LF +  D D+VSWN ++S   Q   F ++V    +MA RG+ PD  ++A 
Sbjct: 82  HAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAV 141

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L AC  LE L  G +IHA A++  + +D    GSALVDMY  CR +E   R F  + ++
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVR-AGSALVDMYGKCRSLEDALRFFHGMGER 200

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               W A I G  QNE     L LF++M+ + GL  +    +SV  +C           +
Sbjct: 201 NSVSWGAAIAGCVQNEQYTRGLELFVQMQRL-GLGVSQPAYASVFRSCAAITCLSTARQL 259

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H HAIK     DR V  A++D+Y++   +  ++  F  +      + N M+ G    G  
Sbjct: 260 HAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLG 319

Query: 469 GDALMLLREMQNMEEEKNRNNV-YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
            +AL L + M        R+ + +D+           ++L  V   C  +    +G ++H
Sbjct: 320 AEALQLFQFM-------TRSGIGFDV-----------VSLSGVFSACAEVKGYLQGLQVH 361

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
             AI++    DV V +A++D+Y KC  L  A  VF  M  R+ ++WN II A   +   +
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSP 646
           + +  L  M+  G     ++P++ T+ ++  AC+    +  G  +  K +K   G++   
Sbjct: 422 DTIAYLNEMLRYG-----MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFV 476

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
              + VVD+  + G + +A +L + +  +  +  +W+S++    +++  E     AQ  F
Sbjct: 477 S--STVVDMYCKCGMITEAQKLHDRIGGQ--ELVSWNSIISGFSLNKQSE----EAQKFF 528



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 128/290 (44%), Gaps = 26/290 (8%)

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A    +  H   +  G     +V N L+ MY+R G    ++ +FD M  RDTVSWNTM+T
Sbjct: 19  ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLT 78

Query: 461 GYTICGQHGDALMLLREMQN-------------MEEEKNRNNVYDLDETVLRP-KPNSIT 506
            Y   G  G A  L   M +              +    R++V    E   R   P+  T
Sbjct: 79  AYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTT 138

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L  +L  CG L  LA G +IHA A++  L  DV  GSALVDMY KC  L  A R F  M 
Sbjct: 139 LAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMG 198

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            RN ++W   I     + +    LEL   M   G     +  ++  + ++F +C+    +
Sbjct: 199 ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLG-----LGVSQPAYASVFRSCAAITCL 253

Query: 627 SEGMDLF-YKMKDDYGIEPSPDHY--ACVVDLLGRAGKVEDAYQLINMMP 673
           S    L  + +K+ +    S D      +VD+  +A  + DA +    +P
Sbjct: 254 STARQLHAHAIKNKF----SADRVVGTAIVDVYAKADSLVDARRAFFSLP 299



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 31/199 (15%)

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           SALA G+  HA  + +       V + L+ MYA+CG    AR VFD+MP R+ ++WN ++
Sbjct: 18  SALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTML 77

Query: 578 MAYGMHGEGQEVLELLKNM---------------------------VAEGSRGGEVKPNE 610
            AY   G+      L   M                             E +R G V P+ 
Sbjct: 78  TAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRG-VAPDR 136

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            T   L  AC     ++ G+ + + +    G+E      + +VD+ G+   +EDA +  +
Sbjct: 137 TTLAVLLKACGGLEDLALGVQI-HAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFH 195

Query: 671 MMPPEFDKAGAWSSLLGAC 689
            M      + +W + +  C
Sbjct: 196 GMGER--NSVSWGAAIAGC 212


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/619 (38%), Positives = 351/619 (56%), Gaps = 41/619 (6%)

Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC----NCREVECGRRVFD 343
           S L  CS  E L   K+IHA  L+  ++ D+  +   L   +C    +   +   + VFD
Sbjct: 19  SCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLS--FCISSTSSDFLPYAQIVFD 73

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP-NATTMSSVVPACVRSEAF 402
                   LWN MI G+  ++  E +L+L+ +M  +    P NA T  S++ AC    AF
Sbjct: 74  GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRM--LCSSAPHNAYTFPSLLKACSNLSAF 131

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
            +   IH    KLG   D Y  N+L++ Y+  G  +++  +FD +   D VSWN++I GY
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNN---------VYDLDETVLR---------PKPNS 504
              G+   AL L R+M     EKN  +           D+++  L+          +P++
Sbjct: 192 VKAGKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           ++L   L  C  L AL +GK IH+Y  +  +  D V+G  L+DMYAKCG +  A  VF  
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           +  ++V  W  +I  Y  HG G+E +     M   G     +KPN +TF A+  ACS++G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-----IKPNVITFTAVLTACSYTG 362

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG  +FY M+ DY ++P+ +HY C+VDLLGRAG +++A + I  MP +   A  W +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK-PNAVIWGA 421

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL ACRIH+N+E+GE   + L  ++P     YV  +NI++  + WDKA + R+ MKE GV
Sbjct: 422 LLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN-VN 803
            K PGCS I      H+FLAGD SH + E++      +  ++ + GYVP+   +L + V+
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVD 541

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           ++E+E ++  HSEKLAI +G++ T PGT IR+ KNLRVC DCH+ TK ISKI  R+I++R
Sbjct: 542 DDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMR 601

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF++G CSCGDYW
Sbjct: 602 DRTRFHHFRDGKCSCGDYW 620



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 190/408 (46%), Gaps = 50/408 (12%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATL 155
           KQIHA ++K G    S  +   L        SD     + VFD     D   WN MI   
Sbjct: 31  KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
               + + +L  ++ ML S+   +++T  S+  ACSNLS         Q+H    ++G E
Sbjct: 91  SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS---AFEETTQIHAQITKLGYE 147

Query: 215 WNTFIMNALMAMYA-------------------------------KLGRVDDAKTLFKSF 243
            + + +N+L+  YA                               K G++D A TLF+  
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            +++ +SW T++S   Q D   EA+    +M    ++PD VS+A+ L AC+ L  L+ GK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
            IH+Y  +  I +D S +G  L+DMY  C E+E    VF  I  K +  W A+I+GY  +
Sbjct: 268 WIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
            +  EA+  F++M+++ G+ PN  T ++V+ AC  +    +     G  I   + RD  +
Sbjct: 327 GHGREAISKFMEMQKM-GIKPNVITFTAVLTACSYTGLVEE-----GKLIFYSMERDYNL 380

Query: 424 Q------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
           +        ++D+  R G ++ +K    +M ++ + V W  ++    I
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 189/430 (43%), Gaps = 57/430 (13%)

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD---DAKTLFKSFEDRDLVSWNTIVSSL 258
           +Q+H   L+ G   +++ +   ++        D    A+ +F  F+  D   WN ++   
Sbjct: 31  KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDI 314
           S +D+   +++  ++M       +  +  S+L ACS+L   +   +IHA   +    ND+
Sbjct: 91  SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150

Query: 315 LIDNSFVGS--------------------------ALVDMYCNCREVECGRRVFDFISDK 348
              NS + S                          +++  Y    +++    +F  +++K
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               W  MI+GY Q + ++EAL LF +M+  + + P+  ++++ + AC +  A    + I
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQN-SDVEPDNVSLANALSACAQLGALEQGKWI 269

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H +  K  +  D  +   L+DMY++ G +E +  +F +++ +   +W  +I+GY   G  
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A+    EMQ M                   KPN IT   VL  C     + +GK I  
Sbjct: 330 REAISKFMEMQKMG-----------------IKPNVITFTAVLTACSYTGLVEEGKLIFY 372

Query: 529 YAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE- 585
              R+  L   +     +VD+  + G L+ A+R    MP++ N + W  ++ A  +H   
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432

Query: 586 --GQEVLELL 593
             G+E+ E+L
Sbjct: 433 ELGEEIGEIL 442



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 40/302 (13%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  + S++   ++L Y  M  S    + + FP++LKA + +       QIHA + 
Sbjct: 83  WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K GY  + V   N+L+N Y   G +    + +FDRI E D VSWNS+I    + GK D+A
Sbjct: 143 KLGYE-NDVYAVNSLINSYAVTG-NFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 165 LEAFRMMLYSN-------------------------------VEPSSFTLVSVALACSNL 193
           L  FR M   N                               VEP + +L +   AC+ L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260

Query: 194 SRRDGLRLGRQVHG--NSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
                L  G+ +H   N  R+   ++ +   L+ MYAK G +++A  +FK+ + + + +W
Sbjct: 261 G---ALEQGKWIHSYLNKTRI-RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
             ++S  + +    EA+    +M   GIKP+ ++  +VL ACS+  +++ GK I  Y++ 
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSME 375

Query: 312 ND 313
            D
Sbjct: 376 RD 377



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 49/268 (18%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +++  +EA+  + EM  SD++PDN +    L A A +  L  GK IH+++
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K    + SV +   L++MY KCG +M +  +VF  I +K   +W ++I+     G    
Sbjct: 274 NKTRIRMDSV-LGCVLIDMYAKCG-EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M    ++P+  T  +V  ACS                                
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSY------------------------------- 360

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRD------LVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
                  G V++ K +F S E RD      +  +  IV  L +     EA  F+++M L 
Sbjct: 361 ------TGLVEEGKLIFYSME-RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL- 412

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEI 305
             KP+ V   ++L AC   + ++ G+EI
Sbjct: 413 --KPNAVIWGALLKACRIHKNIELGEEI 438


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/683 (37%), Positives = 384/683 (56%), Gaps = 50/683 (7%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L+  YAK   +  A+ +F      D+VS+NT++++ +   +   A+    ++ 
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
                 DG +++ V+ AC      D G  +++H + +        S V +A++  Y    
Sbjct: 134 ELRFGLDGFTLSGVIIACGD----DVGLVRQLHCFVVVCGYDCYAS-VNNAVLACYSRKG 188

Query: 334 EVECGRRVFDFISD---KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            +   RRVF  + +   +    WNAMI   GQ+    EA+ LF +M    GL  +  TM+
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVR-RGLKVDMFTMA 247

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM--GRIEISKTIFDDME 448
           SV+ A    +        HG  IK G   + +V + L+D+YS+   G +E  K +F+++ 
Sbjct: 248 SVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRK-VFEEIA 306

Query: 449 VRDTVSWNTMITGYTICGQHGD----ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             D V WNTMI+G++   Q+ D     +   REMQ+       N  +          P+ 
Sbjct: 307 APDLVLWNTMISGFS---QYEDLSEDGIWCFREMQH-------NGFH----------PDD 346

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFD 563
            + + V   C  LS+ + GK++HA AI++ +  + V V +ALV MY+KCG ++ ARRVFD
Sbjct: 347 CSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFD 406

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
            MP  N+++ N +I  Y  HG   E L L + M+ +     ++ PN +TFIA+ +AC H+
Sbjct: 407 TMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQK-----DIAPNTITFIAVLSACVHT 461

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AW 682
           G V EG   F  MK+ + IEP  +HY+C++DLLGRAGK+++A ++I  MP  F+     W
Sbjct: 462 GKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMP--FNPGSIEW 519

Query: 683 SSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEM 742
           ++LLGACR H NVE+   AA     LEP  A+ YV+LSN+Y+SA  W++A  V++ M+E 
Sbjct: 520 ATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRER 579

Query: 743 GVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL--- 799
           GV+K+PGCSWIE   ++H F+A D SH   +++H ++  +  +M++ GYVPD    L   
Sbjct: 580 GVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKD 639

Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
             V  +EKE  L  HSEKLA+AFG+++T     I V KNLR+C DCH A K IS I  RE
Sbjct: 640 EEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGRE 699

Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
           I +RD  RFH FK G CSCGDYW
Sbjct: 700 ITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 172/583 (29%), Positives = 270/583 (46%), Gaps = 83/583 (14%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHA---------------------------HVVKYGYGLS- 111
           F  +LKA    +DL  GK +HA                           H  +  + L+ 
Sbjct: 12  FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQ 71

Query: 112 --SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +V   NTL+N Y K  S +    +VFD I + D VS+N++IA     G+   AL  F 
Sbjct: 72  YPNVFSYNTLINAYAK-HSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            +         FTL  V +AC      D + L RQ+H   +  G +    + NA++A Y+
Sbjct: 131 EVRELRFGLDGFTLSGVIIACG-----DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYS 185

Query: 229 KLGRVDDAKTLFKSFED---RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           + G +++A+ +F+   +   RD VSWN ++ +  Q+ + LEAV   R+M  RG+K D  +
Sbjct: 186 RKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFT 245

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFD 343
           +ASVL A + ++ L  G + H   +++     NS VGS L+D+Y  C    VEC R+VF+
Sbjct: 246 MASVLTAFTCVKDLVGGMQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGGMVEC-RKVFE 303

Query: 344 FISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
            I+   + LWN MI+G+ Q E   E+ +  F +M+   G  P+  +   V  AC    + 
Sbjct: 304 EIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQH-NGFHPDDCSFVCVTSACSNLSSP 362

Query: 403 PDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
              + +H  AIK  +  +R  V NAL+ MYS+ G +  ++ +FD M   + VS N+MI G
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y    QHG  +  LR  + M ++       D+        PN+IT + VL  C     + 
Sbjct: 423 Y---AQHGVEVESLRLFELMLQK-------DI-------APNTITFIAVLSACVHTGKVE 465

Query: 522 KG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
           +G K  +    R  +  +    S ++D+  + G L  A R+ + MP     I W  ++ A
Sbjct: 466 EGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGA 525

Query: 580 YGMHGE-------GQEVLEL----------LKNMVAEGSRGGE 605
              HG          E L+L          L NM A  +R  E
Sbjct: 526 CRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEE 568



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 17/269 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +  +  EA+  + EM R  ++ D F   +VL A   ++DL  G Q H  +
Sbjct: 210 SWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMM 269

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF----- 158
           +K G+  +S  V + L+++Y KC   M +  KVF+ I   D V WN+MI+   ++     
Sbjct: 270 IKSGFHGNS-HVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSE 328

Query: 159 -GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEW 215
            G W      FR M ++   P   + V V  ACSNLS      +G+QVH  +++  +   
Sbjct: 329 DGIW-----CFREMQHNGFHPDDCSFVCVTSACSNLSSPS---VGKQVHALAIKSDIPYN 380

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
              + NAL+AMY+K G V DA+ +F +  + ++VS N++++  +Q+   +E++     M 
Sbjct: 381 RVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELML 440

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKE 304
            + I P+ ++  +VL AC H   ++ G++
Sbjct: 441 QKDIAPNTITFIAVLSACVHTGKVEEGQK 469



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
           T   +L  C A   L  GK +HA   ++++     + +    +Y+KCG L+ A+  FDL 
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
              NV ++N +I AY  H     ++ L + +  E       +P+ V++  L AA +  G 
Sbjct: 71  QYPNVFSYNTLINAYAKHS----LIHLARQVFDEIP-----QPDIVSYNTLIAAYADRGE 121

Query: 626 VSEGMDLFYKMKD 638
               + LF ++++
Sbjct: 122 CRPALRLFAEVRE 134


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/665 (35%), Positives = 363/665 (54%), Gaps = 27/665 (4%)

Query: 200 RLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           RLGR  H  +LR+     + FI   L+ +Y+KL     A     S     +VS+   +S 
Sbjct: 32  RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT-GKEIHAYALRNDILI 316
            +Q+ + L A+     M   G++P+  +  S   A +      T G +IH+ A+R   L 
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            + FV  A +DMY     ++  R +F  + ++ +  WNA++T    +    E +  +  +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL 211

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            E  GL PN  +  +   AC  +      E  HG  +K G   D  V N+++D Y +   
Sbjct: 212 REAGGL-PNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRC 270

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
              ++ +FD M VR++VSW +M+  Y   G   +A       +   EE            
Sbjct: 271 AGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE------------ 318

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P    + + L  C  L  L  G+ +HA A+R+ +  ++ V SALVDMY KCGC+ 
Sbjct: 319 -----PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVE 373

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A ++F   P RN++TWN +I  Y   G+ Q  L +  +M+    R GE  PN +T + +
Sbjct: 374 DAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMI----RSGETAPNYITLVNV 429

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             +CS  G+  +G +LF  M++ +GIEP  +HYACVVDLLGRAG  E AY++I  MP   
Sbjct: 430 ITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR- 488

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
                W +LLGAC++H   E+G IAA+ LF L+P  + ++VLLSN+++SA  W +A D+R
Sbjct: 489 PSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIR 548

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
           K+MK +G++K+PGCSW+ + + +H F A D  H+   ++   L  L ++M+  GY+PDT 
Sbjct: 549 KEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQ 608

Query: 797 CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS-KI 855
             L+++ EEEKE+ +  HSEKLA+AFG++  PPG  IR+ KNLR+C DCH+A KFIS +I
Sbjct: 609 YSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISVEI 668

Query: 856 ESREI 860
            S +I
Sbjct: 669 RSYQI 673



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 210/456 (46%), Gaps = 23/456 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS-LGKQIHAH 102
           S+   +   A+  +   A+ ++  M R  ++P++F FP+  KA A     S +G QIH+ 
Sbjct: 84  SYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSL 143

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
            +++GY      V+   ++MY K G  +     +F  +  ++ V+WN+++      G+  
Sbjct: 144 AIRFGYLPVDPFVSCAALDMYFKTGR-LKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPL 202

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
             +EA+  +  +   P+  +  +   AC+       L LG Q HG  ++ G E +  ++N
Sbjct: 203 ETIEAYFGLREAGGLPNVVSACAFFNACAGAMY---LSLGEQFHGFVVKCGFEMDVSVLN 259

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +++  Y K      A+ +F     R+ VSW ++V++ +QN    EA          G +P
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEP 319

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECGRR 340
               ++S L  C+ L  L  G+ +HA A+R+   ID N FV SALVDMY  C  VE   +
Sbjct: 320 TDFMVSSALTTCAGLLGLHLGRALHAVAVRS--CIDANIFVASALVDMYGKCGCVEDAEQ 377

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F     + +  WNAMI GY      + AL++F  M       PN  T+ +V+ +C R  
Sbjct: 378 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGG 437

Query: 401 AFPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTM 458
              D  E       + G+         ++D+  R G  E +  +   M +R ++S W  +
Sbjct: 438 LTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 497

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           +     C  HG       E+  +  EK    +++LD
Sbjct: 498 LGA---CKMHGKT-----ELGRIAAEK----LFELD 521



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   + + A++    EA  +Y+   RS  +P +F   + L   AG+  L L
Sbjct: 280 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
           G+ +HA  V+     +++ VA+ LV+MYGKCG  + D  ++F    +++ V+WN+MI   
Sbjct: 340 GRALHAVAVRSCID-ANIFVASALVDMYGKCGC-VEDAEQIFYETPQRNLVTWNAMIGGY 397

Query: 156 CRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLS-RRDGLRL 201
              G    AL  F  M+ S    P+  TLV+V  +CS     +DG  L
Sbjct: 398 AHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYEL 445


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/755 (32%), Positives = 425/755 (56%), Gaps = 34/755 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   + S ++S    E    Y +M R  + P    F ++L A A +     G+QIHA  
Sbjct: 294  AWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAA 353

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            VK+G   ++V V ++L+N+Y K G  + D  KVFD  TEK+ V WN+M+    +    + 
Sbjct: 354  VKHGLD-ANVFVGSSLINLYVKHGC-ISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEE 411

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             ++ F+ M  +++E   FT VSV  AC NL   D L +GRQVH  +++   + + F+ NA
Sbjct: 412  TIQMFQYMRRADLEADDFTFVSVLGACINL---DSLDIGRQVHCITIKNSMDADLFVANA 468

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            ++ MY+KLG +D AK LF     +D VSWN ++  L+ N++  EAV  L++M   GI PD
Sbjct: 469  MLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPD 528

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             VS A+ + ACS++   +TGK+IH  +++ ++   N  VGS+L+D+Y    +VE  R+V 
Sbjct: 529  EVSFATAINACSNIRATETGKQIHCASIKYNV-CSNHAVGSSLIDLYSKFGDVESSRKVL 587

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              +    +   NA+ITG  QN  ++EA+ LF ++ +  G  P+  T +S++  C    + 
Sbjct: 588  AHVDASSMVPINALITGLVQNNREDEAIELFQQVLK-DGFKPSNFTFASILSGCTGPVSS 646

Query: 403  PDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMIT 460
               + +H + +K   L +D  +  +L+ +Y +   +E +  +  ++ + ++ V W   I+
Sbjct: 647  VIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            GY   G    +L++   M++          +D+       + +  T  +VL  C  ++AL
Sbjct: 707  GYAQNGYSDQSLVMFWRMRS----------HDV-------RSDEATFASVLKACSEIAAL 749

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMA 579
              GKEIH   I++   +     SAL+DMY+KCG +  +  +F +L   +N++ WN +I+ 
Sbjct: 750  TDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVG 809

Query: 580  YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
            +  +G   E L L + M     +  ++KP+EVT + +  ACSH+G++SEG +LF  M   
Sbjct: 810  FAKNGYANEALLLFQKM-----QESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQV 864

Query: 640  YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            YGI P  DHYAC++DLLGR G +++A ++I+ +P   D    W++ L AC++H++ E G+
Sbjct: 865  YGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGV-IWATFLAACQMHKDEERGK 923

Query: 700  IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
            +AA+ L  +EP  +S YV LS+++++A  W +A   R+ M+E GV K PGCSWI  G++ 
Sbjct: 924  VAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKT 983

Query: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
            + F+  D  H  +  ++  L++L+  M K+  + +
Sbjct: 984  NLFVVQDTHHPDTLGIYKMLDDLTGMMNKDDRIEE 1018



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/575 (28%), Positives = 283/575 (49%), Gaps = 66/575 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDI--QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           L   ARS   R+ +L   +  R  I   PD F    VL A + +  L  G+Q+H  V+K 
Sbjct: 131 LSCHARSGSPRD-VLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           G+  S+   A  LV+MY KC  ++ D  +VFD I   D + W SMIA   R G++  AL 
Sbjct: 190 GFCSSAFCQAG-LVDMYAKC-VEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALA 247

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
            F  M      P   T V++                                     ++ 
Sbjct: 248 LFSRMEKMGSAPDQVTYVTI-------------------------------------IST 270

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
            A +GR+ DA+TL K  +    V+WN ++SS SQ+    E     + M  +G+ P   + 
Sbjct: 271 LASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTF 330

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+L A + +   D G++IHA A+++  L  N FVGS+L+++Y     +   ++VFDF +
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVKHG-LDANVFVGSSLINLYVKHGCISDAKKVFDFST 389

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K I +WNAM+ G+ QN+  EE + +F  M   A L  +  T  SV+ AC+  ++     
Sbjct: 390 EKNIVMWNAMLYGFVQNDLQEETIQMFQYMRR-ADLEADDFTFVSVLGACINLDSLDIGR 448

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   IK  +  D +V NA++DMYS++G I+++K +F  +  +D+VSWN +I G     
Sbjct: 449 QVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNE 508

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           +  +A+ +L+ M+           Y +        P+ ++  T +  C  + A   GK+I
Sbjct: 509 EEEEAVYMLKRMK----------CYGI-------APDEVSFATAINACSNIRATETGKQI 551

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H  +I+  + ++  VGS+L+D+Y+K G +  +R+V   +   +++  N +I     +   
Sbjct: 552 HCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNRE 611

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            E +EL + ++ +G      KP+  TF ++ + C+
Sbjct: 612 DEAIELFQQVLKDG-----FKPSNFTFASILSGCT 641



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 139/580 (23%), Positives = 257/580 (44%), Gaps = 79/580 (13%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC-- 156
           +HA V++ G  L    + + LV++YG+ G   +  ++     T        +     C  
Sbjct: 78  LHARVLRLGLPLRG-RLGDALVDLYGRSGRVGY-AWRALGCCTGAPASGAAASSVLSCHA 135

Query: 157 RFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
           R G     L+AF+ +  S    P  F L  V  ACS L     L  GRQVH + L+ G  
Sbjct: 136 RSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLG---ALEQGRQVHCDVLKSGFC 192

Query: 216 NT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++ F    L+ MYAK   V DA+ +F      D + W ++++   +  ++ +A+    +M
Sbjct: 193 SSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRM 252

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G  PD V+  +++   + +  L                                   
Sbjct: 253 EKMGSAPDQVTYVTIISTLASMGRLSD--------------------------------- 279

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               R +   I       WNA+I+ Y Q+  + E   L+  M+   GL P  +T +S++ 
Sbjct: 280 ---ARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKR-QGLMPTRSTFASMLS 335

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A     AF + + IH  A+K GL  + +V ++L+++Y + G I  +K +FD    ++ V 
Sbjct: 336 AAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVM 395

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN M+ G+       + + + + M+  + E                  +  T ++VL  C
Sbjct: 396 WNAMLYGFVQNDLQEETIQMFQYMRRADLE-----------------ADDFTFVSVLGAC 438

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L +L  G+++H   I+N +  D+ V +A++DMY+K G ++ A+ +F L+P ++ ++WN
Sbjct: 439 INLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWN 498

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF- 633
            +I+    + E +E + +LK M   G     + P+EV+F     ACS+      G  +  
Sbjct: 499 ALIVGLAHNEEEEEAVYMLKRMKCYG-----IAPDEVSFATAINACSNIRATETGKQIHC 553

Query: 634 ----YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
               Y +  ++ +  S      ++DL  + G VE + +++
Sbjct: 554 ASIKYNVCSNHAVGSS------LIDLYSKFGDVESSRKVL 587



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
           +H   ++LGL     + +AL+D+Y R GR+                +W  +         
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRV--------------GYAWRALGCCTGAPAS 123

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              A  +L         ++  + +      +   P+   L  VL  C  L AL +G+++H
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVH 183

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
              +++   +     + LVDMYAKC  +  ARRVFD +   + I W  +I  Y   G  Q
Sbjct: 184 CDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQ 243

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           + L L   M   GS      P++VT++ + +  +  G +S+   L  +++      PS  
Sbjct: 244 QALALFSRMEKMGS-----APDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTV 293

Query: 648 HYACVVDLLGRAGKVEDAYQLINMM 672
            +  V+    ++G   + + L   M
Sbjct: 294 AWNAVISSYSQSGLESEVFGLYKDM 318


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 264/798 (33%), Positives = 425/798 (53%), Gaps = 47/798 (5%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           +H H+ +  +   S+ + NTL+  Y + G+ D     ++ D +  ++ VS+N +I    R
Sbjct: 32  VHGHIAR-AHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSR 90

Query: 158 FGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
            G+ + +LE F      + V+   FT  +   ACS   R   L+ G+ VH  ++  G   
Sbjct: 91  AGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGR---LKEGKVVHALAVLEGLAE 147

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS---LSQNDKFLEAVMFLR 272
             F+ N+L++MYA+ G + +A+ +F   E+RD VSWN++VS    +  +++ L     +R
Sbjct: 148 GVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMR 207

Query: 273 QMALRGIKPDGVSIASVLPACSHLE--MLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
           + A+ G+  +  ++ SV+  CS  +  +    + +H   ++  +  D  F+ SA+VDMY 
Sbjct: 208 RCAM-GL--NSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTD-LFLASAMVDMYA 263

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD------EEALMLFIKMEEVAGLWP 384
               +     +F  + D  + ++NAMI G  ++E         EAL L+ +++   G+ P
Sbjct: 264 KRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQS-RGMEP 322

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
              T SSV+ AC  +      + IHG  +K     D ++ +AL+D+Y     +E     F
Sbjct: 323 TEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCF 382

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             +  +D V+W  MI+G                +QN   E+     ++L    L+P P  
Sbjct: 383 RSVPKQDVVTWTAMISGC---------------VQNELFERALALFHELLGVGLKPDP-- 425

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T+ +V+  C +L+ +  G+++  +A ++       +G++ + MYA+ G +  A + F  
Sbjct: 426 FTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQE 485

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M   +V++W+ II ++  HG  ++ L+    MV     G +V PNE+TF+ +  ACSH G
Sbjct: 486 MESHDVVSWSAIISSHAQHGCARQALQFFNEMV-----GAKVVPNEITFLGVLTACSHGG 540

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +V EG+  +  MK +YG+ P+  H  CVVDLLGRAG++ DA   I       D+   W S
Sbjct: 541 LVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRD-SIFHDEPVVWQS 599

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LLG+CRIH+++E G++ A  +  L+P  +  YV L N+Y  A        +R  MKE GV
Sbjct: 600 LLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGV 659

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
           +KEPG SWIE    IH F+AGD SH +   ++  L  +  ++ K     DTSC+      
Sbjct: 660 KKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKL-TTTDTSCIEWVETT 718

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
             ++  +  HSEKLA+A GI++ P    IRV KNLRVC DCH   K ISK E REIILRD
Sbjct: 719 GREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRD 778

Query: 865 VRRFHHFKNGTCSCGDYW 882
           V RFHHF++G+CSCGDYW
Sbjct: 779 VIRFHHFRDGSCSCGDYW 796



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 261/514 (50%), Gaps = 39/514 (7%)

Query: 53  ARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLS 111
           +R+ Q  E++ +++   R+ +++ D F + A L A +    L  GK +HA  V  G    
Sbjct: 89  SRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLA-E 147

Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
            V V+N+LV+MY +CG DM +  +VFD   E+D VSWNS+++   R G  +  L  F +M
Sbjct: 148 GVFVSNSLVSMYARCG-DMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALM 206

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLG--RQVHGNSLRVG-EWNTFIMNALMAMYA 228
               +  +SF L SV   CS     DG   G    VHG  ++ G + + F+ +A++ MYA
Sbjct: 207 RRCAMGLNSFALGSVIKCCSG---GDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYA 263

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL------EAVMFLRQMALRGIKPD 282
           K G + +A  LFKS  D ++V +N +++ L +++  +      EA+    ++  RG++P 
Sbjct: 264 KRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPT 323

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + +SV+ AC+    ++ GK+IH   L++    D+ F+GSAL+D+Y N   +E G R F
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD-FIGSALIDLYFNSACMEDGFRCF 382

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  W AMI+G  QNE  E AL LF ++  V GL P+  T+SSV+ AC      
Sbjct: 383 RSVPKQDVVTWTAMISGCVQNELFERALALFHELLGV-GLKPDPFTISSVMNACASLAVV 441

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              E +   A K G  R   + N+ + MY+R G +E +   F +ME  D VSW+ +I+ +
Sbjct: 442 RTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSH 501

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
               QHG A   L+    M   K                PN IT + VL  C     + +
Sbjct: 502 ---AQHGCARQALQFFNEMVGAK--------------VVPNEITFLGVLTACSHGGLVDE 544

Query: 523 GKEIHAYAIRNM---LATDVVVGSALVDMYAKCG 553
           G  +  Y I  M   L   V   + +VD+  + G
Sbjct: 545 G--LRYYEIMKMEYGLCPTVKHCTCVVDLLGRAG 576



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 61/340 (17%)

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI--SKTIFDDMEVRDTVSWNTM 458
           + P    +HGH  +       +++N L+  Y R+G  +   ++ + D+M  R+ VS+N +
Sbjct: 25  SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLL 84

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I  Y+  GQ  ++L          E                 K +  T    L  C    
Sbjct: 85  IDAYSRAGQTEESLETFLHAHRAAE----------------VKADRFTYAAALAACSRAG 128

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            L +GK +HA A+   LA  V V ++LV MYA+CG +  ARRVFD+   R+ ++WN ++ 
Sbjct: 129 RLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVS 188

Query: 579 AY---GMHGEGQEVLELLKNM-------------------------VAEGSRGGEVKPNE 610
            Y   G H E   V  L++                           +AE   G  VK   
Sbjct: 189 GYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGL 248

Query: 611 VTFIALFAAC----SHSGMVSEGMDLFYKMKDDYGIEPSP-------DHYACVVDLLGRA 659
            T + L +A     +  G +SE + LF  + D   +  +        D  A   +++  A
Sbjct: 249 DTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREA 308

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
             +    Q   M P EF     +SS++ AC +  ++E G+
Sbjct: 309 LSLYSELQSRGMEPTEF----TFSSVIRACNLAGDIEFGK 344



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  F  A+  + E+    ++PD F   +V+ A A +  +  G+Q+    
Sbjct: 392 TWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFA 451

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+   +  + N+ ++MY + G ++    + F  +   D VSW+++I++  + G    
Sbjct: 452 TKSGFDRFT-AMGNSCIHMYARSG-NVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQ 509

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLR---LGRQVHGNSLRVGEWNTFI 219
           AL+ F  M+ + V P+  T + V  ACS+    D GLR   + +  +G    V      +
Sbjct: 510 ALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVV 569

Query: 220 MNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSS 257
                 +  + GR+ DA+   +   F D  +V W +++ S
Sbjct: 570 -----DLLGRAGRLADAEAFIRDSIFHDEPVV-WQSLLGS 603


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 268/845 (31%), Positives = 426/845 (50%), Gaps = 46/845 (5%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            SW   +    +    REA+  + ++ RS IQP+  +F ++L A     DL  G ++HA++
Sbjct: 269  SWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYI 328

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
             + G     V V N L++MY +CGS + +  +VFD +   ++ +WN+MIA     G  + 
Sbjct: 329  KQAGLE-QEVLVGNALISMYSRCGS-LANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEE 385

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT--FIMN 221
            A   FR M     +P  FT  S+   C++   R  L  G+++H      G W T   +  
Sbjct: 386  AFRLFRAMEQKGFQPDKFTYASLLAICAD---RADLDRGKELHSQIASTG-WQTDLTVAT 441

Query: 222  ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
            AL++MYAK G  ++A+ +F    +R+++SWN  +S   ++D   EA    +QM    + P
Sbjct: 442  ALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNP 501

Query: 282  DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            D ++  ++L +C+  E L+ G+ IH   +    ++ N+ V +AL+ MY  C  +   R V
Sbjct: 502  DHITFITLLNSCTSPEDLERGRYIHG-KINQWGMLSNNHVANALISMYGRCGNLADAREV 560

Query: 342  FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
            F  I  + +  WNAMI    Q+  +  A  LF K     G   +  T  +V+ A    E 
Sbjct: 561  FYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGK-GDKYTFINVLRAVANLED 619

Query: 402  FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
                  IHG   K G G+D  V   L+ MYS+ G +  ++ +F  ++ +D V WN M+  
Sbjct: 620  LDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAA 679

Query: 462  YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
            Y    +  DAL L ++MQ                 +    P+S T  T L  C  L+A+ 
Sbjct: 680  YAHSDRGQDALKLFQQMQ-----------------LEGVNPDSSTYSTALNACARLTAVE 722

Query: 522  KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
             GK+IHA      + TD  V ++L++MY++CGCL  A++VF+ M  R++ +WN +I  Y 
Sbjct: 723  HGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYC 782

Query: 582  MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             +G+G   LE  + M+        + PN+ TF ++ ++ +  G   +  D    +K ++ 
Sbjct: 783  QNGQGNIALEYYELMLR-----ASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWN 837

Query: 642  IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
            +EPS  HYA +V  LGRAG +++A + I  +  E   A  W SLL ACRIH NVE+ E A
Sbjct: 838  MEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAE-SAALMWESLLVACRIHLNVELAETA 896

Query: 702  AQNLF----LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
             ++L        P V      L +IY++A  W+    ++  M+E G+     C+ IE   
Sbjct: 897  VEHLLDAKAQASPAVCEQ---LMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNS 952

Query: 758  EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            E H F+A   S Q   Q    +E L  +M   G+  D     +  +  EKE L     E 
Sbjct: 953  EFHNFIANHLSPQIGVQCK--IEELVRKMTDRGFSLDPQYASN--DSREKECLFFQCPEL 1008

Query: 818  LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
            LA+A+G+ +T  G +IR   + RV +  H+  KFIS+   R I++RD   FH F++G CS
Sbjct: 1009 LAVAYGLEHTASGVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICS 1068

Query: 878  CGDYW 882
            CGDYW
Sbjct: 1069 CGDYW 1073



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 197/704 (27%), Positives = 338/704 (48%), Gaps = 43/704 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A   + +EA   + +M R  ++P+   F ++L A      L  G+QIH+ +
Sbjct: 168 SWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRI 227

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K GY  S V V+  L+NMY KCGS +    KVF+ + E++ VSW +MI+   + G    
Sbjct: 228 AKAGYE-SDVNVSTALINMYCKCGS-LELARKVFNEMRERNVVSWTAMISGYVQHGDSRE 285

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  FR ++ S ++P+  +  S+  AC+N    + L  G ++H    + G E    + NA
Sbjct: 286 ALALFRKLIRSGIQPNKVSFASILGACTN---PNDLGEGLKLHAYIKQAGLEQEVLVGNA 342

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L++MY++ G + +A+ +F +    +  +WN +++   +     EA    R M  +G +PD
Sbjct: 343 LISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEG-LMEEAFRLFRAMEQKGFQPD 401

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + AS+L  C+    LD GKE+H+         D + V +AL+ MY  C   E  R+VF
Sbjct: 402 KFTYASLLAICADRADLDRGKELHSQIASTGWQTDLT-VATALISMYAKCGSPEEARKVF 460

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + ++ +  WNA I+   +++  +EA   F +M     + P+  T  +++ +C   E  
Sbjct: 461 NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRR-DDVNPDHITFITLLNSCTSPEDL 519

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                IHG   + G+  + +V NAL+ MY R G +  ++ +F  +  RD  SWN MI   
Sbjct: 520 ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAAN 579

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G +G A  L R+ ++   E  + + Y              T + VL     L  L  
Sbjct: 580 VQHGANGSAFDLFRKYRS---EGGKGDKY--------------TFINVLRAVANLEDLDA 622

Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
           G+ IH    +     D+ V + L+ MY+KCG L  A  VF  +  ++V+ WN ++ AY  
Sbjct: 623 GRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAH 682

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
              GQ+ L+L + M  EG     V P+  T+     AC+    V  G  +  ++K+  G+
Sbjct: 683 SDRGQDALKLFQQMQLEG-----VNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA-GM 736

Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIA 701
           E        ++++  R G +  A Q+   M        +W++L+ G C+  Q    G IA
Sbjct: 737 ETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSR--DINSWNALIAGYCQNGQ----GNIA 790

Query: 702 AQNL-FLLEPDVASHYVLLSNIYSS-AQLW--DKAMDVRKKMKE 741
            +    +L   +  +    ++I SS AQL   ++A D  + +K+
Sbjct: 791 LEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKK 834



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 294/599 (49%), Gaps = 34/599 (5%)

Query: 91  QDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNS 150
           + L+ GK++H H+    +    + + N L++MY KCGS + D   VF  + +KD VSWN+
Sbjct: 114 KSLAEGKKVHDHMRSAQFK-PDIYLNNMLISMYSKCGS-IEDANNVFQAMEDKDVVSWNA 171

Query: 151 MIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
           MI+     G+   A + F  M    ++P+  T +S+  AC +      L  G Q+H    
Sbjct: 172 MISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPI---ALEFGEQIHSRIA 228

Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
           + G E +  +  AL+ MY K G ++ A+ +F    +R++VSW  ++S   Q+    EA+ 
Sbjct: 229 KAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALA 288

Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
             R++   GI+P+ VS AS+L AC++   L  G ++HAY ++   L     VG+AL+ MY
Sbjct: 289 LFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAY-IKQAGLEQEVLVGNALISMY 347

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  +   R+VFD +       WNAMI GYG+    EEA  LF  ME+  G  P+  T 
Sbjct: 348 SRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEG-LMEEAFRLFRAMEQ-KGFQPDKFTY 405

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
           +S++  C         + +H      G   D  V  AL+ MY++ G  E ++ +F+ M  
Sbjct: 406 ASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPE 465

Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
           R+ +SWN  I   + C +H     L +E     ++  R++V           P+ IT +T
Sbjct: 466 RNVISWNAFI---SCCCRHD----LGKEAFQAFKQMRRDDV----------NPDHITFIT 508

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +L  C +   L +G+ IH    +  + ++  V +AL+ MY +CG L  AR VF  +  R+
Sbjct: 509 LLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRD 568

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           + +WN +I A   HG      +L +   +EG +G     ++ TFI +  A ++   +  G
Sbjct: 569 LGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKG-----DKYTFINVLRAVANLEDLDAG 623

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
             + + + +  G          ++ +  + G + DA  + + +  +      W+++L A
Sbjct: 624 R-MIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEK--DVVCWNAMLAA 679



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 151/290 (52%), Gaps = 23/290 (7%)

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+  N    +  +  CV +++  + + +H H        D Y+ N L+ MYS+ G IE +
Sbjct: 95  GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
             +F  ME +D VSWN MI+GY + G+  +A  L  +MQ       R  +          
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQ-------REGL---------- 197

Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
           KPN  T +++L  C +  AL  G++IH+   +    +DV V +AL++MY KCG L  AR+
Sbjct: 198 KPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARK 257

Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           VF+ M  RNV++W  +I  Y  HG+ +E L L + ++  G     ++PN+V+F ++  AC
Sbjct: 258 VFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSG-----IQPNKVSFASILGAC 312

Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           ++   + EG+ L   +K   G+E        ++ +  R G + +A Q+ +
Sbjct: 313 TNPNDLGEGLKLHAYIKQA-GLEQEVLVGNALISMYSRCGSLANARQVFD 361


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 257/743 (34%), Positives = 394/743 (53%), Gaps = 65/743 (8%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++F+ I   +   WN MI    +      A   ++ ML + +   ++T   +  ACS   
Sbjct: 33  RIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACS--I 90

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
           RR      +QVH + L++G + + ++ N L+  ++    + DA  +F      D VSWN+
Sbjct: 91  RRSEWE-AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNS 149

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           I++   +     EA     QM  R I      IAS                I  + +R  
Sbjct: 150 ILAGYIEIGNVEEAKHIYHQMPERSI------IAS-------------NSMIVLFGMR-- 188

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
                      LV   C         ++FD + +K +  W+A+I  + QNE  EEA+  F
Sbjct: 189 ----------GLVVEAC---------KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 229

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
           + M ++ G+  +     S + AC         + IH  ++K+G      +QNAL+ MYS+
Sbjct: 230 VGMHKI-GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 288

Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM--------QNMEEEK 485
            G I +++ +FD+  + D +SWN+MI+GY  C    +A  +   M         +M    
Sbjct: 289 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 348

Query: 486 NRNNVYDLDETVLRP------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
            +N+++D    + +       KP+  TL++V+  C  L+AL +GK +HAY  RN L  +V
Sbjct: 349 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 408

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           ++G+ L+DMY KCGC+  A  VF  M  + + TWN +I+   M+G  +  L++  NM   
Sbjct: 409 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNM--- 465

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
             +   V PNE+TF+ +  AC H G+V EG   FY M  D+ I+P+  HY C+VDLLGRA
Sbjct: 466 --KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRA 523

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
           GK+++A +L+N MP   D A  W +LLGAC+ H + E+G    + L  L+PD    +VLL
Sbjct: 524 GKLQEAEELLNRMPMTPDVA-TWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLL 582

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFL 779
           SNIY+S   WD  +++R  M +  V K PGCS IE    IH+FLAGD +H   + +   L
Sbjct: 583 SNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDML 642

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
             ++ +++ EGY PD + VL +V+EEEKE+ L  HSEKLAIAFG++N  P T IR+ KNL
Sbjct: 643 VEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNL 702

Query: 840 RVCNDCHQATKFISKIESREIIL 862
           R+CNDCH A K ISK   R+I+ 
Sbjct: 703 RICNDCHTAAKLISKAFCRKIVF 725



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 230/528 (43%), Gaps = 112/528 (21%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R+  ++N    A   Y  M  + +  DN+ +P +++A +  +     KQ+H HV+
Sbjct: 46  WNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVL 105

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+  S V V NTL+N +  C S+M D  +VF+  +  D VSWNS++A     G  + A
Sbjct: 106 KLGFD-SDVYVRNTLINCFSVC-SNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEA 163

Query: 165 LEAFRMMLYSNVEPSSFTLV--------------------------SVALAC--SNLSRR 196
              +  M   ++  S+  +V                          S  +AC   N    
Sbjct: 164 KHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYE 223

Query: 197 DGLRLGRQVHGNSLRVGE----------WNTFIMN----------------------ALM 224
           + +R    +H   + V E           N  ++N                      AL+
Sbjct: 224 EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALI 283

Query: 225 AMYAKLGRVDDAKTLF-------------------------------KSFEDRDLVSWNT 253
            MY+K G +  A+ LF                                S  ++D+VSW++
Sbjct: 284 YMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSS 343

Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
           ++S  +QND F E +   ++M + G KPD  ++ SV+ AC+ L  L+ GK +HAY  RN 
Sbjct: 344 MISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNG 403

Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
           + I N  +G+ L+DMY  C  VE    VF  + +K I+ WNA+I G   N   E +L +F
Sbjct: 404 LTI-NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMF 462

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-------IHGHAIKLGLGRDRYVQNA 426
             M++   + PN  T   V+ AC R     D EG       IH H I+  +         
Sbjct: 463 SNMKK-CHVTPNEITFMGVLGAC-RHMGLVD-EGQHHFYSMIHDHKIQPNVKH----YGC 515

Query: 427 LMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALM 473
           ++D+  R G+++ ++ + + M +  D  +W  ++     C +HGD+ M
Sbjct: 516 MVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA---CKKHGDSEM 560



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 36/301 (11%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +    ++  + EAI +++ M +  +  D     + L A A +  +++GK IH+  
Sbjct: 208 TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLS 267

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDM----------------W--------------DV 133
           +K G   S + + N L+ MY KCG  M                W              + 
Sbjct: 268 LKIGTE-SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
             +FD + EKD VSW+SMI+   +   +D  L  F+ M  S  +P   TLVSV  AC+ L
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +    L  G+ VH    R G   N  +   L+ MY K G V+ A  +F    ++ + +WN
Sbjct: 387 A---ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 443

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            ++  L+ N     ++     M    + P+ ++   VL AC H+ ++D G+  H Y++ +
Sbjct: 444 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQH-HFYSMIH 502

Query: 313 D 313
           D
Sbjct: 503 D 503



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/432 (21%), Positives = 181/432 (41%), Gaps = 91/432 (21%)

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            ++  RR+F+FI +    +WN MI  Y Q      A  L+  M     L  +  T   ++
Sbjct: 27  HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLS-NYLGADNYTYPLLI 85

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            AC    +  + + +H H +KLG   D YV+N L++ +S    +  +  +F++  V D+V
Sbjct: 86  QACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV 145

Query: 454 SWNTMITGYTICG-----QH------------GDALMLLREMQNMEEEK----------- 485
           SWN+++ GY   G     +H             +++++L  M+ +  E            
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD 205

Query: 486 -----------NRNNVYDLDETVLRP---------KPNSITLMTVLPGCGALSALAKGKE 525
                       +N +Y   E  +R            + +  ++ L  C  L  +  GK 
Sbjct: 206 MVTWSALIACFQQNEMY---EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 262

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR------------------------- 560
           IH+ +++    + + + +AL+ MY+KCG +  AR+                         
Sbjct: 263 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNL 322

Query: 561 ------VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
                 +FD MP ++V++W+ +I  Y  +    E L L + M   G      KP+E T +
Sbjct: 323 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-----FKPDETTLV 377

Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
           ++ +AC+    + +G  +   +K + G+  +      ++D+  + G VE A ++   M  
Sbjct: 378 SVISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 436

Query: 675 EFDKAGAWSSLL 686
           +      W++L+
Sbjct: 437 K--GISTWNALI 446


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/558 (39%), Positives = 334/558 (59%), Gaps = 24/558 (4%)

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           L++ Y    ++E  +++FD +S++ IA WNAMI G  Q E++++AL LF +M  + G  P
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGL-GFLP 192

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           +  T+ SV+  C    +    + +H   +K G      V ++L  MY + G +   + + 
Sbjct: 193 DEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLI 252

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
             M +R  V+WNT+I G     Q+G            EE  N+ N+  +       +P+ 
Sbjct: 253 KSMPIRTVVAWNTLIAGK---AQNGCP----------EEVLNQYNMMKMAGF----RPDK 295

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
           IT ++VL  C  L+ L +G++IHA  I+   ++ + V S+L+ MY++ GCL  + + F  
Sbjct: 296 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVD 355

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
               +V+ W+ +I AYG HG G+E LEL   M        +++ NEVTF++L  ACSHSG
Sbjct: 356 RENFDVVLWSSMIAAYGFHGRGEEALELFHQM-----EDLKMEANEVTFLSLLYACSHSG 410

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
           +  +G + F  M   Y ++P  +HY CVVDLLGRAG++E+A  +I  MP + D    W +
Sbjct: 411 LKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGI-IWKT 469

Query: 685 LLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
           LL AC++H+  E+ E  ++ +  L+P  A+ YVLLSNI++SA+ W     +RK M++  V
Sbjct: 470 LLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSV 529

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNE 804
           RKEPG SW+E  + +H+F  GD SH Q  ++  +L+ L   +++ GYVP+   VLH+++ 
Sbjct: 530 RKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDN 589

Query: 805 EEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRD 864
           EEKE  L  HSEK AIAF ++NT     IRV KNLRVC+DCH A K IS+I +REII+RD
Sbjct: 590 EEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRD 649

Query: 865 VRRFHHFKNGTCSCGDYW 882
             RFHHFK+G CSCG+YW
Sbjct: 650 ASRFHHFKDGECSCGNYW 667



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 209/444 (47%), Gaps = 52/444 (11%)

Query: 71  SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-- 128
           S+I  D   F  +L++   +  L  GKQ+H+ ++  G G     ++N L+N Y K G   
Sbjct: 56  SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSG-GSKDKFISNHLLNFYSKLGQFK 114

Query: 129 ----------------------------DMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
                                       D+    K+FD ++E++  +WN+MIA L +F  
Sbjct: 115 SSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEF 174

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
              AL  F+ M      P  FTL SV   C+ L     L  G++VH   L+ G E ++ +
Sbjct: 175 NKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLR---SLLAGQEVHACLLKCGFELSSVV 231

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
            ++L  MY K G + D + L KS   R +V+WNT+++  +QN    E +     M + G 
Sbjct: 232 GSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF 291

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALR---NDILIDNSFVGSALVDMYCNCREVE 336
           +PD ++  SVL ACS L  L  G++IHA  ++   + +L     V S+L+ MY     +E
Sbjct: 292 RPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLA----VVSSLISMYSRSGCLE 347

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
              + F    +  + LW++MI  YG +   EEAL LF +ME++  +  N  T  S++ AC
Sbjct: 348 DSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLK-MEANEVTFLSLLYAC 406

Query: 397 VRS---EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DT 452
             S   E   +   +     KL    + Y    ++D+  R GR+E ++ +   M V+ D 
Sbjct: 407 SHSGLKEKGTEYFDLMVKKYKLKPRIEHYT--CVVDLLGRAGRLEEAEGMIRSMPVQPDG 464

Query: 453 VSWNTMITGYTICGQHGDALMLLR 476
           + W T++     C  H +A M  R
Sbjct: 465 IIWKTLLAA---CKLHKEAEMAER 485



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 177/374 (47%), Gaps = 21/374 (5%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N    N L+  Y +LG ++ A+ LF    +R++ +WN +++ L+Q +   +A+   ++M 
Sbjct: 127 NVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMY 186

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G  PD  ++ SVL  C+ L  L  G+E+HA  L+    + +S VGS+L  MY     +
Sbjct: 187 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFEL-SSVVGSSLAHMYIKSGSL 245

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
             G ++   +  + +  WN +I G  QN   EE L  +  M ++AG  P+  T  SV+ A
Sbjct: 246 SDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQY-NMMKMAGFRPDKITFVSVLSA 304

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C         + IH   IK G      V ++L+ MYSR G +E S   F D E  D V W
Sbjct: 305 CSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLW 364

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           ++MI  Y   G+  +AL L  +M++++ E                  N +T +++L  C 
Sbjct: 365 SSMIAAYGFHGRGEEALELFHQMEDLKME-----------------ANEVTFLSLLYACS 407

Query: 516 ALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITW 573
                 KG E     ++   L   +   + +VD+  + G L  A  +   MPV+ + I W
Sbjct: 408 HSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIW 467

Query: 574 NVIIMAYGMHGEGQ 587
             ++ A  +H E +
Sbjct: 468 KTLLAACKLHKEAE 481



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 22/325 (6%)

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           +W + +  S ++ +C++  +    + +H   I  G  +D+++ N L++ YS++G+ + S 
Sbjct: 58  IWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSL 117

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------------MEEEKNRN 488
            +F +M  R+ +S+N +I GY   G    A  L  EM                + E N+ 
Sbjct: 118 VLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQ 177

Query: 489 NVYDLDETV-LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
            +    E   L   P+  TL +VL GC  L +L  G+E+HA  ++       VVGS+L  
Sbjct: 178 ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 237

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY K G L+   ++   MP+R V+ WN +I     +G  +EVL     M   G R     
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFR----- 292

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           P+++TF+++ +ACS    + +G  +  ++    G        + ++ +  R+G +ED+ +
Sbjct: 293 PDKITFVSVLSACSELATLGQGQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLEDSIK 351

Query: 668 LINMMPPEFDKAGAWSSLLGACRIH 692
              +    FD    WSS++ A   H
Sbjct: 352 AF-VDRENFDVV-LWSSMIAAYGFH 374



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 138/247 (55%), Gaps = 6/247 (2%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           ++A+  + EM      PD F   +VL+  AG++ L  G+++HA ++K G+ LSSV V ++
Sbjct: 176 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSV-VGSS 234

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L +MY K GS + D  K+   +  +  V+WN++IA   + G  +  L  + MM  +   P
Sbjct: 235 LAHMYIKSGS-LSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRP 293

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAK 237
              T VSV  ACS L+    L  G+Q+H   ++ G  +   ++++L++MY++ G ++D+ 
Sbjct: 294 DKITFVSVLSACSELAT---LGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSI 350

Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
             F   E+ D+V W++++++   + +  EA+    QM    ++ + V+  S+L ACSH  
Sbjct: 351 KAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSG 410

Query: 298 MLDTGKE 304
           + + G E
Sbjct: 411 LKEKGTE 417



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 37/278 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +  +A++    E +  Y  M  +  +PD   F +VL A + +  L  G+QIHA V
Sbjct: 262 AWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEV 321

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S + V ++L++MY + G  + D  K F      D V W+SMIA     G+ + 
Sbjct: 322 IKAGAS-SVLAVVSSLISMYSRSGC-LEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEE 379

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           ALE F  M    +E +  T +S+  ACS+     GL+             E  T   + +
Sbjct: 380 ALELFHQMEDLKMEANEVTFLSLLYACSH----SGLK-------------EKGTEYFDLM 422

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           +  Y    R++                +  +V  L +  +  EA   +R M    ++PDG
Sbjct: 423 VKKYKLKPRIEH---------------YTCVVDLLGRAGRLEEAEGMIRSMP---VQPDG 464

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
           +   ++L AC   +  +  + I    ++ D L   S+V
Sbjct: 465 IIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYV 502


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 339/595 (56%), Gaps = 40/595 (6%)

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           H  M+ TG   H Y L   +LI ++ V +  +              +F+ I +  I L+N
Sbjct: 29  HAHMITTGLIFHTYPLSRILLISSTIVFTHALS-------------IFNHIPNPTIFLYN 75

Query: 355 AMITGYGQ-NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
            +I+       +   A  L+ ++     L PN  T  S+  AC           +H H +
Sbjct: 76  TLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVL 135

Query: 414 K-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT-----ICGQ 467
           K L    D +VQ AL++ Y++ G++   + +F+ +   D  SWN++++ Y      IC  
Sbjct: 136 KFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICED 195

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
              +L +L     M++                 K N +TL+ ++  C  L AL++G   H
Sbjct: 196 VSLSLEVLTLFIEMQKS--------------LIKANEVTLVALISACAELGALSQGAWAH 241

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            Y +++ L  +  VG+AL+DMY+KCGCL+ A ++FD +P R+ + +N +I  + +HG G 
Sbjct: 242 VYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGH 301

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           + L+L K M  EG     + P++VT +    +CSH G+V EG D+F  MK+ YG+EP  +
Sbjct: 302 QALDLFKKMTLEG-----LAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLE 356

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY C+VDLLGRAG++ +A + +  MP +   A  W SLLGA R+H N+EIGE+  ++L  
Sbjct: 357 HYGCLVDLLGRAGRLREAEERVLNMPMK-PNAVIWRSLLGAARVHGNLEIGEVVLKHLIQ 415

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP+ + +YVLLSN+Y+S   WD    VRK MK+ G+ K PG S +E G  +H+FL GD 
Sbjct: 416 LEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDK 475

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H +S++++  LE +S R+ + G+ P T  VL ++ EEEKE  L  HSE+LAIAF ++ +
Sbjct: 476 THPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIAS 535

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
                IR+ KNLRVC DCH ++K ISKI  REII+RD  RFHHFK G CSC DYW
Sbjct: 536 HHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 215/444 (48%), Gaps = 50/444 (11%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-----YGLSSVT-VANTLVNMYGKCGS 128
           P+  +    L+ +   + L   KQ+HAH++  G     Y LS +  +++T+V  +     
Sbjct: 4   PNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTHA---- 59

Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW-DLALEAF-RMMLYSNVEPSSFTLVSV 186
                  +F+ I       +N++I++L        +A   + R++ ++ ++P+ FT  S+
Sbjct: 60  -----LSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSL 114

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGE--WNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
             AC +   +  LR GR +H + L+  E   + F+  AL+  YAK G+V   + LF    
Sbjct: 115 FKACGS---QPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQIS 171

Query: 245 DRDLVSWNTIVSSLSQNDKF--------LEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
             DL SWN+I+S+   N           LE +    +M    IK + V++ +++ AC+ L
Sbjct: 172 KPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAEL 231

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMY--CNCREVECGRRVFDFISDKKIALWN 354
             L  G   H Y L++++ + N FVG+AL+DMY  C C ++ C  ++FD +  +    +N
Sbjct: 232 GALSQGAWAHVYVLKHNLKL-NHFVGTALIDMYSKCGCLDLAC--QLFDQLPHRDTLCYN 288

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-------SEAFPDKEG 407
           AMI G+  + Y  +AL LF KM  + GL P+  T+   + +C          + F   + 
Sbjct: 289 AMIGGFAIHGYGHQALDLFKKM-TLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKE 347

Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICG 466
           ++G   KL    + Y    L+D+  R GR+  ++    +M ++ + V W +++    + G
Sbjct: 348 VYGVEPKL----EHY--GCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHG 401

Query: 467 QHGDALMLLREMQNMEEEKNRNNV 490
                 ++L+ +  +E E + N V
Sbjct: 402 NLEIGEVVLKHLIQLEPETSGNYV 425



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 13/247 (5%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           +T + ++P+ F FP++ KA      L  G+ +H HV+K+        V   L+N Y KCG
Sbjct: 99  LTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCG 158

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIAT-------LCRFGKWDL-ALEAFRMMLYSNVEPS 179
                 Y +F++I++ D  SWNS+++        +C      L  L  F  M  S ++ +
Sbjct: 159 KVGACRY-LFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKAN 217

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
             TLV++  AC+ L     L  G   H   L+   + N F+  AL+ MY+K G +D A  
Sbjct: 218 EVTLVALISACAELG---ALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQ 274

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           LF     RD + +N ++   + +    +A+   ++M L G+ PD V++   + +CSH+ +
Sbjct: 275 LFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGL 334

Query: 299 LDTGKEI 305
           ++ G ++
Sbjct: 335 VEEGCDV 341


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/790 (33%), Positives = 400/790 (50%), Gaps = 107/790 (13%)

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
           + +Y+N+       ++     ++  R + +      + N  RV + +    N  ++ + +
Sbjct: 7   LRIYNNLRVRRVCTINFGHTSTSTRRSESV-----TNNNKPRVKDPDILKWNKAISTHMR 61

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G  D A  +F +   R  VS+N ++S   +N KF  A     QM  R +    V +   
Sbjct: 62  NGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGY 121

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           +  C     L   + +       D++  NS     L+  Y     V+  R VFD + +K 
Sbjct: 122 VRNCR----LGDARRLFDLMPEKDVVSWNS-----LLSGYAQNGYVDEAREVFDNMPEKN 172

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-- 407
              WN ++  Y  N   EEA +LF    E    W +  + + ++   VR +   D     
Sbjct: 173 SISWNGLLAAYVHNGRIEEACLLF----ESKSDW-DLISWNCLMGGFVRKKKLGDARWLF 227

Query: 408 --------------IHGHAIKLGLGRDR--------------------YVQNALMDM--- 430
                         I G+A   GL + R                    YVQN ++D    
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287

Query: 431 -------------------YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
                              Y +  +++I++ +F+ M  R+  SWNTMITGY   GQ GD 
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGY---GQIGD- 343

Query: 472 LMLLREMQNMEEEKN-------------RNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +   R+  +M  +++               +  +     +  K +  +L     GC ALS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC-ALS 402

Query: 519 ALAK------GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
             A       GK+IH  A++    T   VG+AL+ MY KCG ++ A   F+ +  ++V++
Sbjct: 403 TCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS 462

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN ++  Y  HG G++ L + ++M   G     VKP+E+T + + +ACSH+G++  G + 
Sbjct: 463 WNTMLAGYARHGFGRQALTVFESMKTAG-----VKPDEITMVGVLSACSHTGLLDRGTEY 517

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           FY M  DYG+ P+  HY C++DLLGRAG++E+A  LI  MP +   A +W +LLGA RIH
Sbjct: 518 FYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ-PGAASWGALLGASRIH 576

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            N E+GE AA+ +F +EP  +  YVLLSN+Y+++  W  A  +R KM+++GV+K PG SW
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           +E  ++IH F  GD SH + E+++ +LE L  +MR+EGYV  T  VLH+V EEEKE +L 
Sbjct: 637 VEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLK 696

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AFGIL  P G  IRV KNLRVC DCH A K ISKI  R IILRD  RFHHF 
Sbjct: 697 YHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFN 756

Query: 873 NGTCSCGDYW 882
            G CSCGDYW
Sbjct: 757 EGFCSCGDYW 766



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 124/262 (47%), Gaps = 58/262 (22%)

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           ++G++  G + FY M ++Y + P+  HY C++DLLGR  ++E+                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
             +LLGA RIH N E+GE AAQ  F + P  +                        KM++
Sbjct: 820 --ALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRD 856

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
           +GV+K PG SW E  ++IH F  G    ++ E + GFLE L  +MR+     + +     
Sbjct: 857 VGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT----- 910

Query: 802 VNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV-AKNLRVCNDCHQATKFISKIESREI 860
                    L   SE LA A GIL  P G   RV  K + VC DC  A K +SKI  R I
Sbjct: 911 ---------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLI 961

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
            LRD    H F    CSCG+YW
Sbjct: 962 TLRDS---HRFNESICSCGEYW 980



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 224/561 (39%), Gaps = 109/561 (19%)

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           G C S +     VF+ +  +  VS+N+MI+   R  K++LA   F  M   ++   +  L
Sbjct: 63  GHCDSAL----HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVML 118

Query: 184 VSVALACSNLSRRDGLRLGRQ---VHGNSLRVG------------------EWNTFIMNA 222
                 C     R    L  +   V  NSL  G                  E N+   N 
Sbjct: 119 TGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNG 178

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+A Y   GR+++A  LF+S  D DL+SWN ++    +  K  +A     +M +R    D
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----D 234

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-------------------- 322
            +S  +++   +    L   + +   +   D+    + V                     
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 323 ------SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG--------------- 361
                 +A++  Y   ++++  R +F+ +  + I+ WN MITGYG               
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354

Query: 362 ----------------QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                           Q+ + EEAL +F+++++  G   N  T    +  C    A    
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESLNRATFGCALSTCADIAALELG 413

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + IHG A+K+G G   +V NAL+ MY + G I+ +   F+ +E +D VSWNTM+ GY   
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G    AL +   M+                     KP+ IT++ VL  C     L +G E
Sbjct: 474 GFGRQALTVFESMKTAG-----------------VKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 526 IHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                 ++          + ++D+  + G L  A+ +   MP +    +W  ++ A  +H
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 584 GE---GQEVLELLKNMVAEGS 601
           G    G++  E++  M  + S
Sbjct: 577 GNTELGEKAAEMVFKMEPQNS 597



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 171/350 (48%), Gaps = 26/350 (7%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S TR   +W   +    ++    EA   + EM     + +  ++ A++      + + + 
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIA 316

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++   +        +++  NT++  YG+ G D+    K FD + ++D VSW ++IA   
Sbjct: 317 RELFESMP-----CRNISSWNTMITGYGQIG-DIAQARKFFDMMPQRDCVSWAAIIAGYA 370

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           + G ++   EA  M +    +  S    +   A S  +    L LG+Q+HG ++++G   
Sbjct: 371 QSGHYE---EALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427

Query: 217 -TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+ NAL+AMY K G +D+A   F+  E++D+VSWNT+++  +++    +A+     M 
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCRE 334
             G+KPD +++  VL ACSH  +LD G E + Y++  D  +I  S   + ++D+      
Sbjct: 488 TAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546

Query: 335 VECGRRVFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
           +E  +   D I +       A W A++     +G  E  E+A  +  KME
Sbjct: 547 LEEAQ---DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/605 (36%), Positives = 357/605 (59%), Gaps = 31/605 (5%)

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +  D ++ + ++  C     +   + +H +   N      +F+ + L++MY     ++  
Sbjct: 12  LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYE-PKTFLINTLINMYVKFGLLDEA 70

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           R +FD + D+ +  W  MI+ Y  +  + +AL   I M    G+ PN  T SSV+ AC  
Sbjct: 71  RNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLR-EGVRPNMYTYSSVLRAC-- 127

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
            +   +   +HG  +K+GL  D +V++AL+D YS++G    +  +F++M   D V WN++
Sbjct: 128 -DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSI 186

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           I G+       + L L + M+  +        +  D++         TL +VL  C  L+
Sbjct: 187 IGGFAQNSDGDETLHLYKRMKRAD--------FVADQS---------TLTSVLRACTGLA 229

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD-LMPVRNVITWNVII 577
            L  G+++H + ++     D+++ +AL+DMY KCG L  A  +F  +M  ++VI+W+ +I
Sbjct: 230 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMI 287

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
                +G   + L+L + M ++G      KPN +T + +  ACSH+G+V++G   F  MK
Sbjct: 288 AGLAQNGFSADALKLFEAMKSKGP-----KPNYITILGVLFACSHAGLVNDGWYYFQSMK 342

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
           + +GI+P  +HY C++DLLGRAGK+++A +LI+ M  E D A  W  LLGACR+H+NV++
Sbjct: 343 EHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPD-AVTWRILLGACRVHKNVDL 401

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
              AA+ +  L+P  A  Y+LLSNIY+++Q W+   +VR+KM+  GV+K+PGCSWIE   
Sbjct: 402 AIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSK 461

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
           ++H F+ GD SH + E++   L  L +R+ + GYVPDT+ VL ++  E+ E  L  HSEK
Sbjct: 462 QVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEK 521

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           LAI FG+++ P   TI + KNLR+C DCH   K +S++E+R I++RD  R+HHF+ G CS
Sbjct: 522 LAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCS 581

Query: 878 CGDYW 882
           CGDYW
Sbjct: 582 CGDYW 586



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 22/399 (5%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R+ +  D   +  ++K       +   + +H HV   GY   +  + NTL+NMY K G
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLI-NTLINMYVKFG 65

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
             + +   +FD + +++ VSW +MI+          AL+   +ML   V P+ +T  SV 
Sbjct: 66  L-LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVL 124

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            AC      DGL   RQ+HG+ L+VG E + F+ +AL+  Y+KLG   DA  +F      
Sbjct: 125 RAC------DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           DLV WN+I+   +QN    E +   ++M       D  ++ SVL AC+ L +L+ G+++H
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD-FISDKKIALWNAMITGYGQNEY 365
            + L+ D    +  + +AL+DMYC C  +E    +F   +++K +  W+ MI G  QN +
Sbjct: 239 VHVLKYD---QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGF 295

Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDR 421
             +AL LF  M+   G  PN  T+  V+ AC  +    D     + +  H   +  GR+ 
Sbjct: 296 SADALKLFEAMKS-KGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEH-FGIDPGREH 353

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
           Y    ++D+  R G+++ +  +  +M    D V+W  ++
Sbjct: 354 Y--GCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL 390



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 219/477 (45%), Gaps = 70/477 (14%)

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           R  ++  R VH +    G E  TF++N L+ MY K G +D+A+ LF    DR++VSW T+
Sbjct: 29  RGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTM 88

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S+ S ++   +A+ FL  M   G++P+  + +SVL AC  L  L   +++H   L+  +
Sbjct: 89  ISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGL 145

Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
             D  FV SAL+D Y    E      VF+ +    + +WN++I G+ QN   +E L L+ 
Sbjct: 146 ESD-VFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYK 204

Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           +M+  A    + +T++SV+ AC           +H H +K    +D  + NAL+DMY + 
Sbjct: 205 RMKR-ADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKC 261

Query: 435 GRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
           G +E +  +F  M   +D +SW+TMI G    G   DAL L   M++             
Sbjct: 262 GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKG----------- 310

Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
                 PKPN IT++ VL  C     +  G     Y  ++M                   
Sbjct: 311 ------PKPNYITILGVLFACSHAGLVNDG----WYYFQSM------------------- 341

Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTF 613
                +  F + P R    +  II   G  G+  E ++L+  M  E        P+ VT+
Sbjct: 342 -----KEHFGIDPGRE--HYGCIIDLLGRAGKLDEAVKLIHEMNHE--------PDAVTW 386

Query: 614 IALFAACSHSGMVSEGMDL-FYKMKDDYGIEPS-PDHYACVVDLLGRAGKVEDAYQL 668
             L  AC     V + +DL  Y  K+   ++P+    Y  + ++   + K ED  ++
Sbjct: 387 RILLGACR----VHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEV 439



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 10/260 (3%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + + SN   +A+   I M R  ++P+ + + +VL+A  G+ +L   +Q+H  +
Sbjct: 84  SWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSI 140

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   S V V + L++ Y K G +  D   VF+ +   D V WNS+I    +    D 
Sbjct: 141 LKVGLE-SDVFVRSALIDTYSKLG-EQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 198

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
            L  ++ M  ++      TL SV  AC+ L+    L LGRQVH + L+  + +  + NAL
Sbjct: 199 TLHLYKRMKRADFVADQSTLTSVLRACTGLAL---LELGRQVHVHVLKYDQ-DLILNNAL 254

Query: 224 MAMYAKLGRVDDAKTLF-KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           + MY K G ++DA  LF +   ++D++SW+T+++ L+QN    +A+     M  +G KP+
Sbjct: 255 LDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPN 314

Query: 283 GVSIASVLPACSHLEMLDTG 302
            ++I  VL ACSH  +++ G
Sbjct: 315 YITILGVLFACSHAGLVNDG 334



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 83/324 (25%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +   A+++   E +  Y  M R+D   D     +VL+A  G+  L LG+Q+H HV+
Sbjct: 183 WNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL 242

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR-ITEKDQVSWNSMIATLCRFGKWDL 163
           KY   L    + N L++MY KCGS + D   +F R +TEKD +SW++MIA L + G    
Sbjct: 243 KYDQDL---ILNNALLDMYCKCGS-LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSAD 298

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN-------------LSRRDGLRLGRQVHGNSL 210
           AL+ F  M     +P+  T++ V  ACS+             +    G+  GR+ +G   
Sbjct: 299 ALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYG--- 355

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSS------------ 257
                       ++ +  + G++D+A  L      + D V+W  ++ +            
Sbjct: 356 -----------CIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIY 404

Query: 258 ----------------------LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
                                  + + K+ +     R+M  RG+K D        P CS 
Sbjct: 405 AAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKD--------PGCSW 456

Query: 296 LEMLDTGKEIHAYALRNDILIDNS 319
           +E+    K++HA+     IL DNS
Sbjct: 457 IEV---SKQVHAF-----ILGDNS 472



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
           R   ++IT   ++  C    A+ + + +H +   N       + + L++MY K G L+ A
Sbjct: 11  RLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEA 70

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
           R +FD MP RNV++W  +I AY       + L+ L  M+ EG     V+PN  T+ ++  
Sbjct: 71  RNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREG-----VRPNMYTYSSVLR 125

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           AC   G+++  +   +      G+E      + ++D   + G+  DA  + N M      
Sbjct: 126 AC--DGLLN--LRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT--GD 179

Query: 679 AGAWSSLLGA 688
              W+S++G 
Sbjct: 180 LVVWNSIIGG 189


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/680 (35%), Positives = 386/680 (56%), Gaps = 45/680 (6%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           N F  N L++ YAK   V+ A  LF      D VS+NT++++ ++      A     +M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTG--KEIHAYALRNDILIDNSFV--GSALVDMYCN 331
              +  DG +++ ++ AC     ++ G  +++HA ++   +   +S+V  G+AL+  Y  
Sbjct: 133 EAFLDMDGFTLSGIITACG----INVGLIRQLHALSVVTGL---DSYVSVGNALITSYSK 185

Query: 332 CREVECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
              ++  RR+F ++S D+    WN+M+  Y Q+    +AL L+++M  V GL  +  T++
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMT-VRGLIVDIFTLA 244

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS-KTIFDDMEV 449
           SV+ A    +        H   IK G  ++ +V + L+D+YS+ G   +  + +FD++  
Sbjct: 245 SVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304

Query: 450 RDTVSWNTMITGYTICGQHGD-ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            D V WNTMI+GY++     D AL   R++Q +                   +P+  +L+
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGH-----------------RPDDCSLV 347

Query: 509 TVLPGCGALSALAKGKEIHAYAIR-NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            V+  C  +S+ ++G+++H  A++ ++ +  + V +AL+ MY+KCG L  A+ +FD MP 
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE 407

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            N +++N +I  Y  HG G + L L + M+       +  P  +TFI++ AAC+H+G V 
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEM-----DFTPTNITFISVLAACAHTGRVE 462

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG-AWSSLL 686
           +G   F  MK  +GIEP   H++C++DLLGRAGK+ +A +LI  +P  FD     WS+LL
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIP--FDPGFFXWSALL 520

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRK 746
           GACRIH NVE+   AA  L  L+P  A+ YV+L+NIYS       A  VRK M++ GV+K
Sbjct: 521 GACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKK 580

Query: 747 EPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL----HNV 802
           +PGCSWIE    IH F+A D  H   +++  +LE +  +++K GY P+           V
Sbjct: 581 KPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRV 640

Query: 803 NEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
            + E+E  L  HSEKLA++FG+++T  G  I V KNLR+C DCH A K+IS++  REI +
Sbjct: 641 WQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITV 700

Query: 863 RDVRRFHHFKNGTCSCGDYW 882
           RD  RFH FK+G CSCG YW
Sbjct: 701 RDSHRFHCFKDGQCSCGGYW 720



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 176/610 (28%), Positives = 297/610 (48%), Gaps = 79/610 (12%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC-----GSDMWD- 132
           +F   LK     +DL  GK +HA  +K  +  +S  ++N  + +Y KC        ++D 
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIK-SFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 133 ------------------------VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
                                    +++FD + + D VS+N++IA   R G    A + F
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG--RQVHGNSLRVG-EWNTFIMNALMA 225
             M  + ++   FTL  +  AC       G+ +G  RQ+H  S+  G +    + NAL+ 
Sbjct: 129 LEMREAFLDMDGFTLSGIITAC-------GINVGLIRQLHALSVVTGLDSYVSVGNALIT 181

Query: 226 MYAKLGRVDDAKTLFKSF-EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            Y+K G + +A+ +F    EDRD VSWN++V +  Q+ +  +A+    +M +RG+  D  
Sbjct: 182 SYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIF 241

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVF 342
           ++ASVL A ++++ L  G + HA  +++     NS VGS L+D+Y  C    ++C R+VF
Sbjct: 242 TLASVLTAFTNVQDLLGGLQFHAKLIKSGYH-QNSHVGSGLIDLYSKCGGCMLDC-RKVF 299

Query: 343 DFISDKKIALWNAMITGYGQNE-YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           D IS+  + LWN MI+GY   E   +EAL  F +++ V G  P+  ++  V+ AC    +
Sbjct: 300 DEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGV-GHRPDDCSLVCVISACSNMSS 358

Query: 402 FPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                 +HG A+KL +  +R  V NAL+ MYS+ G +  +KT+FD M   +TVS+N+MI 
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIA 418

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY    QHG     L   Q M E         +D T     P +IT ++VL  C     +
Sbjct: 419 GY---AQHGMGFQSLHLFQRMLE---------MDFT-----PTNITFISVLAACAHTGRV 461

Query: 521 AKGKEIHAYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVII 577
             GK I+   ++     +   G  S ++D+  + G L+ A R+ + +P       W+ ++
Sbjct: 462 EDGK-IYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL 520

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKM 636
            A  +HG     +EL    +   +R  ++ P N   ++ L    S +G + +   +  K+
Sbjct: 521 GACRIHGN----VEL---AIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASV-RKL 572

Query: 637 KDDYGIEPSP 646
             D G++  P
Sbjct: 573 MRDRGVKKKP 582



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 147/270 (54%), Gaps = 7/270 (2%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S+ R + SW   + +  +  +  +A+  Y+EMT   +  D F   +VL A   +QDL  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
            Q HA ++K GY  +S  V + L+++Y KCG  M D  KVFD I+  D V WN+MI+   
Sbjct: 260 LQFHAKLIKSGYHQNS-HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318

Query: 157 RFGKW-DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VG 213
            +    D ALE FR +      P   +LV V  ACSN+S       GRQVHG +L+  + 
Sbjct: 319 LYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQ---GRQVHGLALKLDIP 375

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
                + NAL+AMY+K G + DAKTLF +  + + VS+N++++  +Q+    +++   ++
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           M      P  ++  SVL AC+H   ++ GK
Sbjct: 436 MLEMDFTPTNITFISVLAACAHTGRVEDGK 465



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 192/426 (45%), Gaps = 66/426 (15%)

Query: 285 SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDF 344
           S    L  C     L TGK +HA  +++  +  ++++ +  + +Y  CR +   RRVFD 
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKS-FVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR------ 398
             D  +  +N +I+ Y +  Y E A  LF +M +     P++ + ++++ A  R      
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ-----PDSVSYNTLIAAYARRGDTQP 123

Query: 399 --------SEAFPDKEGI-----------------HGHAIKLGLGRDRYVQ--NALMDMY 431
                    EAF D +G                    HA+ +  G D YV   NAL+  Y
Sbjct: 124 AFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSY 183

Query: 432 SRMGRIEISKTIFDDM-EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           S+ G ++ ++ IF  + E RD VSWN+M+  Y    +   AL L  EM        R  +
Sbjct: 184 SKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM------TVRGLI 237

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
            D+            TL +VL     +  L  G + HA  I++    +  VGS L+D+Y+
Sbjct: 238 VDI-----------FTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286

Query: 551 KC-GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKP 608
           KC GC+   R+VFD +   +++ WN +I  Y ++ +   E LE  + +   G R     P
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHR-----P 341

Query: 609 NEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           ++ + + + +ACS+    S+G  +    +K D        + A ++ +  + G + DA  
Sbjct: 342 DDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNA-LIAMYSKCGNLRDAKT 400

Query: 668 LINMMP 673
           L + MP
Sbjct: 401 LFDTMP 406



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 11/203 (5%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           EA+  + ++     +PD+ +   V+ A + +   S G+Q+H   +K     + ++V N L
Sbjct: 326 EALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNAL 385

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           + MY KCG ++ D   +FD + E + VS+NSMIA   + G    +L  F+ ML  +  P+
Sbjct: 386 IAMYSKCG-NLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPT 444

Query: 180 SFTLVSVALACSNLSR-RDG---LRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
           + T +SV  AC++  R  DG     + +Q  G     G ++  I      +  + G++ +
Sbjct: 445 NITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI-----DLLGRAGKLSE 499

Query: 236 AKTLFKSFE-DRDLVSWNTIVSS 257
           A+ L ++   D     W+ ++ +
Sbjct: 500 AERLIETIPFDPGFFXWSALLGA 522


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/622 (38%), Positives = 362/622 (58%), Gaps = 37/622 (5%)

Query: 267 AVMFLRQMALRGIKPDGVSIASVLPAC-SHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           A  F + + +  + P+  +   ++  C S  E++    +I AYA+++    D SF  + L
Sbjct: 15  AETFTKPLKIDTVNPNPPNPILLISKCNSERELM----QIQAYAIKSH-QEDVSF-NTKL 68

Query: 326 VDMYCNCREVEC----GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG 381
           ++ +C     E      R +FD +S+  I ++N++  GY ++    E   LF+++ E   
Sbjct: 69  IN-FCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILE-DD 126

Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
           L P+  T  S++ AC  ++A  +   +H  ++KLG+  + YV   L++MY+    ++ ++
Sbjct: 127 LLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAAR 186

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            +FD +     V +N MITGY    +  +AL L REMQ     KN              K
Sbjct: 187 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG----KNL-------------K 229

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           PN ITL++VL  C  L +L  GK IH YA ++     V V +AL+DM+AKCG L+ A  +
Sbjct: 230 PNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSI 289

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+ M  ++   W+ +I+AY  HG+ +  + + + M     R   V+P+E+TF+ L  ACS
Sbjct: 290 FENMRYKDTQAWSAMIVAYANHGQAENSMLMFERM-----RSENVQPDEITFLGLLNACS 344

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H+G+V EG + F  M  ++GI PS  HY  +VDLLGRAG +EDAY+ I+ +P        
Sbjct: 345 HTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPIS-PTPML 403

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
           W  LL AC  H N+E+ E  ++ +  L+      YV+LSN+Y+  + W+    +RK MK+
Sbjct: 404 WRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKD 463

Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH- 800
               K PGCS IE  + +H+F +GDG    + +LH  L+ + + ++  GYVPDTS V+H 
Sbjct: 464 RKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHA 523

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           ++ ++EKE  L  HSEKLAIAFG+LNTPPGTTIRV KNLRVC DCH A K IS I  R++
Sbjct: 524 DMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKV 583

Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
           +LRDV+RFHHF++G CSC D+W
Sbjct: 584 VLRDVQRFHHFEDGKCSCRDFW 605



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 187/374 (50%), Gaps = 24/374 (6%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A+ LF +  + D+V +N+I    S++   LE      ++    + PD  +  S+L AC+ 
Sbjct: 84  ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
            + L+ G+++H  +++  +  DN +V   L++MY  C +V+  R VFD I +  +  +NA
Sbjct: 144 AKALEEGRQLHCLSMKLGV-DDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNA 202

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           MITGY +     EAL LF +M+    L PN  T+ SV+ +C    +    + IH +A K 
Sbjct: 203 MITGYARRNRPNEALSLFREMQG-KNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKH 261

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G  +   V  AL+DM+++ G ++ + +IF++M  +DT +W+ MI  Y   GQ  +++++ 
Sbjct: 262 GFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMF 321

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM- 534
             M++        NV          +P+ IT + +L  C     + +G+E  ++ +    
Sbjct: 322 ERMRS-------ENV----------QPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFG 364

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV-ITWNVIIMAYGMHGEGQEVLELL 593
           +   +    ++VD+  + G L  A    D +P+    + W +++ A   H    E+ E +
Sbjct: 365 IVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHN-NLELAEKV 423

Query: 594 KNMVAE--GSRGGE 605
              + E   S GG+
Sbjct: 424 SERILELDDSHGGD 437



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 165/315 (52%), Gaps = 13/315 (4%)

Query: 50  RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
           R  +RS    E    ++E+   D+ PDN+ FP++LKA A  + L  G+Q+H   +K G  
Sbjct: 104 RGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVD 163

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
             +V V  TL+NMY +C  D+     VFDRI E   V +N+MI    R  + + AL  FR
Sbjct: 164 -DNVYVCPTLINMYTEC-EDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 221

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYA 228
            M   N++P+  TL+SV  +C+ L   D   LG+ +H  + + G      +N AL+ M+A
Sbjct: 222 EMQGKNLKPNEITLLSVLSSCALLGSLD---LGKWIHEYAKKHGFCKYVKVNTALIDMFA 278

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +DDA ++F++   +D  +W+ ++ + + + +   +++   +M    ++PD ++   
Sbjct: 279 KCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLG 338

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L ACSH  +++ G+E  ++ +    ++ +     ++VD+      +E     ++FI   
Sbjct: 339 LLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLE---DAYEFIDKL 395

Query: 349 KIA----LWNAMITG 359
            I+    LW  ++  
Sbjct: 396 PISPTPMLWRILLAA 410



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 177/378 (46%), Gaps = 15/378 (3%)

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATL 155
           QI A+ +K       V+    L+N   +    S M     +FD ++E D V +NS+    
Sbjct: 49  QIQAYAIKSHQ--EDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGY 106

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R          F  +L  ++ P ++T  S+  AC+       L  GRQ+H  S+++G +
Sbjct: 107 SRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACA---VAKALEEGRQLHCLSMKLGVD 163

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N ++   L+ MY +   VD A+ +F    +  +V +N +++  ++ ++  EA+   R+M
Sbjct: 164 DNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 223

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             + +KP+ +++ SVL +C+ L  LD GK IH YA ++        V +AL+DM+  C  
Sbjct: 224 QGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG-FCKYVKVNTALIDMFAKCGS 282

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           ++    +F+ +  K    W+AMI  Y  +   E ++++F +M     + P+  T   ++ 
Sbjct: 283 LDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRS-ENVQPDEITFLGLLN 341

Query: 395 ACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT- 452
           AC  +    + +E       + G+        +++D+  R G +E +    D + +  T 
Sbjct: 342 ACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTP 401

Query: 453 VSWNTMITGYTICGQHGD 470
           + W  ++     C  H +
Sbjct: 402 MLWRILLAA---CSSHNN 416


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/714 (35%), Positives = 397/714 (55%), Gaps = 34/714 (4%)

Query: 79  AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
           +FPA+LKA A ++D+  G ++H+ +VK GY  S+  + N LV+MY K   D+    ++FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAK-NDDLSAARRLFD 241

Query: 139 RITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
              EK D V WNS++++    GK    LE FR M  +   P+S+T+VS   AC   S   
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY-- 299

Query: 198 GLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
             +LG+++H + L+    ++  ++ NAL+AMY + G++  A+ + +   + D+V+WN+++
Sbjct: 300 -AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358

Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
               QN  + EA+ F   M   G K D VS+ S++ A   L  L  G E+HAY +++   
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-W 417

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
             N  VG+ L+DMY  C       R F  + DK +  W  +I GY QN+   EAL LF  
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           + +   +  +   + S++ A    ++    + IH H ++ GL  D  +QN L+D+Y +  
Sbjct: 478 VAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR 535

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +  +  +F+ ++ +D VSW +MI+   + G   +A+ L R M                E
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV---------------E 580

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
           T L    +S+ L+ +L    +LSAL KG+EIH Y +R     +  +  A+VDMYA CG L
Sbjct: 581 TGL--SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638

Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
             A+ VFD +  + ++ +  +I AYGMHG G+  +EL   M     R   V P+ ++F+A
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM-----RHENVSPDHISFLA 693

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           L  ACSH+G++ EG      M+ +Y +EP P+HY C+VD+LGRA  V +A++ + MM  E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
              A  W +LL ACR H   EIGEIAAQ L  LEP    + VL+SN+++    W+    V
Sbjct: 754 -PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 812

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           R KMK  G+ K PGCSWIE   ++HKF A D SH +S++++  L  ++ ++ +E
Sbjct: 813 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 298/597 (49%), Gaps = 39/597 (6%)

Query: 70  RSDIQPDNF---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
           R D+  +N    AF  VL+     + +S G+Q+H+ + K         +A  LV MYGKC
Sbjct: 70  RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129

Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
           GS + D  KVFD + ++   +WN+MI      G+   AL  +  M    V     +  ++
Sbjct: 130 GS-LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188

Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFED 245
             AC+ L  RD +R G ++H   +++G  +T FI+NAL++MYAK   +  A+ LF  F++
Sbjct: 189 LKACAKL--RD-IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 246 R-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
           + D V WN+I+SS S + K LE +   R+M + G  P+  +I S L AC        GKE
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IHA  L++       +V +AL+ MY  C ++    R+   +++  +  WN++I GY QN 
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
             +EAL  F  M   AG   +  +M+S++ A  R         +H + IK G   +  V 
Sbjct: 366 MYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
           N L+DMYS+          F  M  +D +SW T+I GY     H +AL L R++     E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
                   +DE +L          ++L     L ++   KEIH + +R  L  D V+ + 
Sbjct: 485 --------IDEMILG---------SILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526

Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
           LVD+Y KC  + +A RVF+ +  ++V++W  +I +  ++G   E +EL + MV  G    
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG---- 582

Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS-----PDHYACVVDL 655
            +  + V  + + +A +    +++G ++  Y ++  + +E S      D YAC  DL
Sbjct: 583 -LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/722 (34%), Positives = 401/722 (55%), Gaps = 49/722 (6%)

Query: 90  IQDLSLGKQIHAHVVKYG----YGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKD 144
           ++ L  G+ +H H++       +   +  ++N L+ MYG+CG+ D   V  VFD + +++
Sbjct: 55  LRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARV--VFDGMLDRN 112

Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
            VSW ++IA   +  +   A+  F  ML S   P  F L S   ACS L     L LGRQ
Sbjct: 113 PVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELG---DLGLGRQ 169

Query: 205 VHGNSLRVGEWNT----FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           VH  +++   W +     + NAL+ MY+K G V D   LF+   D+DL+SW +I++ L+Q
Sbjct: 170 VHAQAIK---WESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQ 226

Query: 261 NDKFLEAVMFLRQMALRGIK-PDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDN 318
             + ++A+   R+M   G+  P+     SV  ACS +   L+ G++IH  +++   L  N
Sbjct: 227 QGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQ-LDRN 285

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           S+ G +L DMY  C E++  R+VF  I    +  WN++I  +       EA++LF +M +
Sbjct: 286 SYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRD 345

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            +GL P+  T+ +++ ACV  +A      IH + +KLGLG D  V N+L+ MY+R     
Sbjct: 346 -SGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFS 404

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F +   RD V+WN+++T    C QH          Q++E+      V+ L   + 
Sbjct: 405 SAMDVFHETHDRDVVTWNSILTA---CVQH----------QHLED------VFKLFSLLH 445

Query: 499 RPKP--NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
           R  P  + I+L  VL     L      K++HAYA +  L  D ++ + L+D YAKCG L+
Sbjct: 446 RSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLD 505

Query: 557 FARRVFDLMPV-RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
            A ++F++M   R+V +W+ +I+ Y   G  +E L+L   M     R   VKPN VTF+ 
Sbjct: 506 DANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARM-----RNLGVKPNHVTFVG 560

Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
           +  ACS  G+V EG   +  MK +YGI P+ +H +CV+DLL RAG++ +A + ++ MP E
Sbjct: 561 VLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFE 620

Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
            D    W +LL A R H +V++G+ AA+ +  ++P  ++ YVLL NIY+S+  W++   +
Sbjct: 621 PDII-MWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARL 679

Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDT 795
           +K M+  GV+K PG SWI+   E+  F+  D SH +S++++  LE +   M K GY+P+ 
Sbjct: 680 KKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGLEMVKAGYIPEL 739

Query: 796 SC 797
           SC
Sbjct: 740 SC 741



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 186/641 (29%), Positives = 316/641 (49%), Gaps = 65/641 (10%)

Query: 26  ATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLK 85
           A  +  +   G   R   SW   + + A++++  +A+  +  M RS   PD FA  + + 
Sbjct: 97  APDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAIC 156

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ 145
           A + + DL LG+Q+HA  +K+  G S + V N LV MY K GS + D + +F+RI +KD 
Sbjct: 157 ACSELGDLGLGRQVHAQAIKWESG-SDLIVQNALVTMYSKSGS-VGDGFALFERIRDKDL 214

Query: 146 VSWNSMIATLCRFGKWDLALEAFRMMLYSNV-EPSSFTLVSVALACSNLSRRDGLRLGRQ 204
           +SW S+IA L + G+   AL+ FR M+   V  P+ F   SV  ACS +   + L  G Q
Sbjct: 215 ISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVV--NSLEYGEQ 272

Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG S++   + N++   +L  MYA+   +D A+ +F   E  DLVSWN+++++ S    
Sbjct: 273 IHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGL 332

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNS 319
             EA++   +M   G++PDG+++ ++L AC   + L  G+ IH+Y     L  D+++ NS
Sbjct: 333 LSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNS 392

Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF-IKMEE 378
                L+ MY  C +      VF    D+ +  WN+++T   Q+++ E+   LF +    
Sbjct: 393 -----LLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRS 447

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +  L  +  ++++V+ A      F   + +H +A K+GL  D  + N L+D Y++ G ++
Sbjct: 448 MPSL--DRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLD 505

Query: 439 ISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
            +  +F+ M   RD  SW+++I GY   G   +AL L   M+N                 
Sbjct: 506 DANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRN----------------- 548

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG---SALVDMYAKCGC 554
           L  KPN +T + VL  C  +  + +G   + Y+I       V      S ++D+ A+ G 
Sbjct: 549 LGVKPNHVTFVGVLTACSRVGLVDEG--CYYYSIMKPEYGIVPTREHCSCVLDLLARAGR 606

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE----VKPN 609
           L+ A +  D MP   ++I W  ++ A   H           N V  G R  E    + P+
Sbjct: 607 LSEAAKFVDQMPFEPDIIMWKTLLAASRTH-----------NDVDMGKRAAEGVLNIDPS 655

Query: 610 E-VTFIALFAACSHSGMVSEGMDLFYKMKDDY---GIEPSP 646
               ++ L    + SG  +E    F ++K D    G++ SP
Sbjct: 656 HSAAYVLLCNIYASSGNWNE----FARLKKDMRSSGVQKSP 692


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/790 (33%), Positives = 400/790 (50%), Gaps = 107/790 (13%)

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAK 229
           + +Y+N+       ++     ++  R + +      + N  RV + +    N  ++ + +
Sbjct: 7   LRIYNNLRVRRVCTINFGHTSTSTRRSESV-----TNNNKPRVKDPDILKWNKAISTHMR 61

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G  D A  +F +   R  VS+N ++S   +N KF  A     QM  R +    V +   
Sbjct: 62  NGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGY 121

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           +  C     L   + +       D++  NS     L+  Y     V+  R VFD + +K 
Sbjct: 122 VRNCR----LGDARRLFDLMPEKDVVSWNS-----LLSGYAQNGYVDEAREVFDNMPEKN 172

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG-- 407
              WN ++  Y  N   EEA +LF    E    W +  + + ++   VR +   D     
Sbjct: 173 SISWNGLLAAYVHNGRIEEACLLF----ESKSDW-DLISWNCLMGGFVRKKKLGDARWLF 227

Query: 408 --------------IHGHAIKLGLGRDR--------------------YVQNALMDM--- 430
                         I G+A   GL + R                    YVQN ++D    
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287

Query: 431 -------------------YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
                              Y +  +++I++ +F+ M  R+  SWNTMITGY   GQ GD 
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGY---GQIGD- 343

Query: 472 LMLLREMQNMEEEKN-------------RNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
           +   R+  +M  +++               +  +     +  K +  +L     GC ALS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC-ALS 402

Query: 519 ALAK------GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
             A       GK+IH  A++    T   VG+AL+ MY KCG ++ A   F+ +  ++V++
Sbjct: 403 TCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS 462

Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
           WN ++  Y  HG G++ L + ++M   G     VKP+E+T + + +ACSH+G++  G + 
Sbjct: 463 WNTMLAGYARHGFGRQALTVFESMKTAG-----VKPDEITMVGVLSACSHTGLLDRGTEY 517

Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           FY M  DYG+ P+  HY C++DLLGRAG++E+A  LI  MP +   A +W +LLGA RIH
Sbjct: 518 FYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ-PGAASWGALLGASRIH 576

Query: 693 QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSW 752
            N E+GE AA+ +F +EP  +  YVLLSN+Y+++  W  A  +R KM+++GV+K PG SW
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636

Query: 753 IEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLC 812
           +E  ++IH F  GD SH + E+++ +LE L  +MR+EGYV  T  VLH+V EEEKE +L 
Sbjct: 637 VEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLK 696

Query: 813 GHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
            HSEKLA+AFGIL  P G  IRV KNLRVC DCH A K ISKI  R IILRD  RFHHF 
Sbjct: 697 YHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFN 756

Query: 873 NGTCSCGDYW 882
            G CSCGDYW
Sbjct: 757 EGFCSCGDYW 766



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 226/561 (40%), Gaps = 109/561 (19%)

Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
           G C S +     VF+ +  +  VS+N+MI+   R  K++LA   F  M   ++   +  L
Sbjct: 63  GHCDSAL----HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVML 118

Query: 184 VSVALACS-NLSRR--DGLRLGRQVHGNSLRVG------------------EWNTFIMNA 222
                 C    +RR  D +     V  NSL  G                  E N+   N 
Sbjct: 119 TGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNG 178

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+A Y   GR+++A  LF+S  D DL+SWN ++    +  K  +A     +M +R    D
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----D 234

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG-------------------- 322
            +S  +++   +    L   + +   +   D+    + V                     
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 323 ------SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG--------------- 361
                 +A++  Y   ++++  R +F+ +  + I+ WN MITGYG               
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354

Query: 362 ----------------QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
                           Q+ + EEAL +F+++++  G   N  T    +  C    A    
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESLNRATFGCALSTCADIAALELG 413

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + IHG A+K+G G   +V NAL+ MY + G I+ +   F+ +E +D VSWNTM+ GY   
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G    AL +   M+                     KP+ IT++ VL  C     L +G E
Sbjct: 474 GFGRQALTVFESMK-----------------TAGVKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 526 IHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                 ++          + ++D+  + G L  A+ +   MP +    +W  ++ A  +H
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 584 GE---GQEVLELLKNMVAEGS 601
           G    G++  E++  M  + S
Sbjct: 577 GNTELGEKAAEMVFKMEPQNS 597



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 171/350 (48%), Gaps = 26/350 (7%)

Query: 37  SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
           S TR   +W   +    ++    EA   + EM     + +  ++ A++      + + + 
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIA 316

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           +++   +        +++  NT++  YG+ G D+    K FD + ++D VSW ++IA   
Sbjct: 317 RELFESMP-----CRNISSWNTMITGYGQIG-DIAQARKFFDMMPQRDCVSWAAIIAGYA 370

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           + G ++   EA  M +    +  S    +   A S  +    L LG+Q+HG ++++G   
Sbjct: 371 QSGHYE---EALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427

Query: 217 -TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
             F+ NAL+AMY K G +D+A   F+  E++D+VSWNT+++  +++    +A+     M 
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCRE 334
             G+KPD +++  VL ACSH  +LD G E + Y++  D  +I  S   + ++D+      
Sbjct: 488 TAGVKPDEITMVGVLSACSHTGLLDRGTE-YFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546

Query: 335 VECGRRVFDFISDKKI----ALWNAMITG---YGQNEYDEEALMLFIKME 377
           +E  +   D I +       A W A++     +G  E  E+A  +  KME
Sbjct: 547 LEEAQ---DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 257/768 (33%), Positives = 405/768 (52%), Gaps = 44/768 (5%)

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           KCG D     K+FD++++ + V++NS+I+   +    D  +  F       ++   +   
Sbjct: 13  KCG-DTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSF 243
               ACS   +   L  G+ +HG  L  G  +  ++ N+L+ MY+K G+VD A+ LF   
Sbjct: 72  GALTACS---QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHS 128

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH----LEML 299
           +  D VSWN++++   QN K+ E +  L++M   G+  +  ++ S L ACS      +M 
Sbjct: 129 DKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF 188

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             G  +H +A++  + +D   VG+AL+DMY     ++   ++FD + DK + ++NAM+ G
Sbjct: 189 --GTMLHDHAIKLGLHLD-VVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAG 245

Query: 360 YGQNEYDEE-----ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
             Q E  E+     AL LF +M+   G+ P+  T SS++ AC+  E F   + +H    K
Sbjct: 246 LLQQETIEDKCAYKALNLFFEMKS-CGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCK 304

Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
            GL  D Y+ + L+D+YS +G +  +   F+ +     V    MI GY   G+   AL L
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSL 364

Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             E+   EE                 KP+     T++  C  +  L  G++I  +A +  
Sbjct: 365 FYELLTYEE-----------------KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVG 407

Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
           ++   +  ++ + MYAK G L  A   F  M   ++++W+ +I +   HG   E L   +
Sbjct: 408 ISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFE 467

Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
            M + G     ++PN   F+ +  ACSH G+V EG+  F  M+ DY ++    H  CVVD
Sbjct: 468 LMKSCG-----IEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVD 522

Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
           LLGRAG++ DA  LI  +  E +    W +LL ACRIH++    +  AQ +  LEP  ++
Sbjct: 523 LLGRAGRLADAESLILRLGFEHEPV-MWRALLSACRIHKDTVTAQRVAQKVIELEPLASA 581

Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
            YVLL NIY  A     A  VR  M+E  ++KEPG SWI+ GD+++ F++GD SH+ S Q
Sbjct: 582 SYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQ 641

Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
           ++  L+ +    ++     D   +L    E E  T +  HSEKLA+AFG+L       +R
Sbjct: 642 IYAKLDEMLATTKRLDSAKD---ILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVR 698

Query: 835 VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           V KNLR+C DCH   K  S +E RE+I+RD  RFHHFK+G+CSCGDYW
Sbjct: 699 VMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 245/511 (47%), Gaps = 55/511 (10%)

Query: 32  LPLPGSQTRCKE--SWIESLRSEARSN--QFREAILSYIEMTRSD-------------IQ 74
           LP    Q +C +  S  +     ++SN   +   I  Y++M+  D             ++
Sbjct: 5   LPFSSRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLK 64

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
            D +     L A +   +LS GK IH  ++ YG G S V + N+L++MY KCG    D  
Sbjct: 65  LDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLG-SQVVLTNSLIDMYSKCGQ--VDYA 121

Query: 135 KV-FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
           ++ FD   + D VSWNS+IA   + GK++  L   + M  + +  +++TL S   ACS  
Sbjct: 122 RILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS-- 179

Query: 194 SRRDGLRL-GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
           S  +G ++ G  +H +++++G   +  +  AL+ MYAK G +DDA  +F    D+++V +
Sbjct: 180 SNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMY 239

Query: 252 NTIVSSLSQNDKF-----LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           N +++ L Q +        +A+    +M   GIKP   + +S+L AC  +E     K++H
Sbjct: 240 NAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVH 299

Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
           A   +N +L D  ++GS L+D+Y     +      F+ I +  I    AMI GY QN   
Sbjct: 300 ALMCKNGLLSDE-YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEF 358

Query: 367 EEALMLFIKM---EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
           E AL LF ++   EE     P+    S+++ +C         E I GHA K+G+ R    
Sbjct: 359 ESALSLFYELLTYEEK----PDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIF 414

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
           QN+ + MY++ G +  +   F  ME  D VSW+TMI       QHG A+  LR  + M+ 
Sbjct: 415 QNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSN---AQHGHAMEALRFFELMKS 471

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
                            +PN    + VL  C
Sbjct: 472 --------------CGIEPNHFAFLGVLIAC 488



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A+  + EM    I+P  F + ++LKA   ++D    KQ+HA + K G  LS   + + L
Sbjct: 259 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL-LSDEYIGSIL 317

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           +++Y   GS M D    F+ I     V   +MI    + G+++ AL  F  +L    +P 
Sbjct: 318 IDLYSVLGS-MMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPD 376

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKT 238
            F   ++  +C+N+     LR G Q+ G++ +VG    T   N+ + MYAK G +  A  
Sbjct: 377 EFIFSTIMSSCANMGM---LRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
            F+  E+ D+VSW+T++ S +Q+   +EA+ F   M   GI+P+  +   VL ACSH  +
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 299 LDTG 302
           ++ G
Sbjct: 494 VEEG 497



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 5/149 (3%)

Query: 54  RSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
           ++ +F  A+  + E+   + +PD F F  ++ + A +  L  G+QI  H  K   G+S  
Sbjct: 354 QNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATK--VGISRF 411

Query: 114 TV-ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           T+  N+ + MY K G D++     F ++   D VSW++MI +  + G    AL  F +M 
Sbjct: 412 TIFQNSQIWMYAKSG-DLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMK 470

Query: 173 YSNVEPSSFTLVSVALACSNLSR-RDGLR 200
              +EP+ F  + V +ACS+     +GLR
Sbjct: 471 SCGIEPNHFAFLGVLIACSHRGLVEEGLR 499


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/642 (37%), Positives = 362/642 (56%), Gaps = 33/642 (5%)

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           R+ VSW T+VS LSQN    +A+     M   G+ P   +++S   A + L     G ++
Sbjct: 4   RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 63

Query: 306 HAYALRNDILIDNS-FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           H   +R  +  D   FV S L DMY  C  +    RVFD +  K    W AMI GY +N 
Sbjct: 64  HCVGVR--LGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD---KEGIHGHAIKLGLGRDR 421
             E A++ F  M+    +  +     SV+ A   S    D    + IH    K G   + 
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEV 178

Query: 422 YVQNALMDMYSRMGRIE-ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            V+NAL+DMY++   +E  S+ +  D    + VS  +MI GY       +AL++  E++ 
Sbjct: 179 AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR- 237

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
                 R  V          +PN  T  +++ GC   + L +G ++HA  I+  L  D  
Sbjct: 238 ------RQGV----------EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 281

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
           VGS LVDMY KCG ++ + ++F+ +  R  I WN +I  +  HG G+E ++    M+  G
Sbjct: 282 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 341

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
                ++PN + F++L  ACSH+G+V EG+  FY MK+ +GIEP  +HY+C++D  GRAG
Sbjct: 342 -----IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAG 396

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           ++++AY+ I+ MP + +  G W SLLGACR+  + E+GE+AAQNL  LEP     +V LS
Sbjct: 397 RLDEAYKFISEMPIKPNAYG-WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLS 455

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
            IY+S   W+    VRK M++  ++K PG SW++   + H F + D SH Q + ++  LE
Sbjct: 456 GIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLE 515

Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
            L+ R+++EGY+PDTS +  N+ +  KE +L  HSE++A+AF +++ P    I V KNLR
Sbjct: 516 ELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLR 575

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +C DCH A KFI K+E R+II+RD  RFHHF NG CSCGDYW
Sbjct: 576 ICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 208/406 (51%), Gaps = 30/406 (7%)

Query: 68  MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
           M R+ + P  FA  +  +A A +     G Q+H   V+ G+  + + VA+ L +MY KCG
Sbjct: 32  MRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFD-TELFVASNLADMYSKCG 90

Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
             + +  +VFD++ +KD V+W +MI    + G  + A+ +FR     +++          
Sbjct: 91  L-LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR-----DMKREGLVGADQH 144

Query: 188 LACSNLSRRDGLR---LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
           + CS LS   GL+   L + +H    + G E    + NAL+ MYAK   V+ A  + K  
Sbjct: 145 VFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKI- 203

Query: 244 EDRDLVSWNTIVSSLSQNDKFL------EAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
              D   WN +VS  S  D ++      EA++   ++  +G++P+  + +S++  C+   
Sbjct: 204 ---DPGGWN-VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQA 259

Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
           +L+ G ++HA  ++ D LI +SFVGS LVDMY  C  +    ++F+ I  +    WNA+I
Sbjct: 260 LLEQGAQLHAQVIKTD-LIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVI 318

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI-HGHAIKLG 416
             + Q+ +  EA+  F +M   +G+ PN     S++ AC  S A    EG+ + +++K  
Sbjct: 319 NVFAQHGHGREAIQAFDRM-IYSGIRPNHIAFVSLLTAC--SHAGLVDEGLKYFYSMKEA 375

Query: 417 LGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMI 459
            G +   ++   ++D Y R GR++ +     +M ++ +   W +++
Sbjct: 376 HGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 421



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 203/452 (44%), Gaps = 37/452 (8%)

Query: 143 KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLG 202
           ++ VSW ++++ L +      AL AF  M  + V P+ F L S A A + L        G
Sbjct: 4   RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA---PLPG 60

Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
            Q+H   +R+G +   F+ + L  MY+K G + +A  +F     +D V+W  ++   ++N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 262 DKFLEAVMFLRQMALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
                AV+  R M   G +  D     SVL A   L+     K IH    +    ++ + 
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA- 179

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWN-----AMITGYGQNEYDEEALMLFIK 375
           V +AL+DMY    +VE   RV           WN     +MI GY + +  EEAL+++++
Sbjct: 180 VRNALIDMYAKSMDVESASRVLKIDPGG----WNVVSGTSMIDGYIETDCVEEALVIYVE 235

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           +    G+ PN  T SS++  C           +H   IK  L RD +V + L+DMY + G
Sbjct: 236 LRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            I +S  +F+++E R  ++WN +I    +  QHG                 R  +   D 
Sbjct: 295 LISLSMQLFNEIEYRTDIAWNAVI---NVFAQHG---------------HGREAIQAFDR 336

Query: 496 TVLRP-KPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCG 553
            +    +PN I  +++L  C     + +G K  ++    + +       S ++D Y + G
Sbjct: 337 MIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAG 396

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
            L+ A +    MP++ N   W  ++ A  M G
Sbjct: 397 RLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 428



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 16/266 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           +W   +   A++     A+LS+ +M R   +  D   F +VL A  G++D  L K IH  
Sbjct: 109 AWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCC 168

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN-----SMIATLCR 157
           V K G+ L  V V N L++MY K      DV     R+ + D   WN     SMI     
Sbjct: 169 VTKAGFELE-VAVRNALIDMYAKS----MDVESA-SRVLKIDPGGWNVVSGTSMIDGYIE 222

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-N 216
               + AL  +  +    VEP+ FT  S+   C+  +    L  G Q+H   ++     +
Sbjct: 223 TDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQAL---LEQGAQLHAQVIKTDLIRD 279

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
           +F+ + L+ MY K G +  +  LF   E R  ++WN +++  +Q+    EA+    +M  
Sbjct: 280 SFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIY 339

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTG 302
            GI+P+ ++  S+L ACSH  ++D G
Sbjct: 340 SGIRPNHIAFVSLLTACSHAGLVDEG 365



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M  R+ VSW T+++G +    H DAL     M+       R  V           P    
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR-------RAGV----------APTRFA 43

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L +      AL A   G ++H   +R    T++ V S L DMY+KCG L+ A RVFD MP
Sbjct: 44  LSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMP 103

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            ++ + W  +I  Y  +G  +  +   ++M     R G V  ++  F ++ +A   SG +
Sbjct: 104 QKDAVAWTAMIDGYAKNGSLEAAVLSFRDM----KREGLVGADQHVFCSVLSA---SGGL 156

Query: 627 SEGM--DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
            +G      +      G E        ++D+  ++  VE A +++ + P      G W+ 
Sbjct: 157 KDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP------GGWNV 210

Query: 685 LLGACRIHQNVE 696
           + G   I   +E
Sbjct: 211 VSGTSMIDGYIE 222


>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 350/596 (58%), Gaps = 31/596 (5%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVF 342
           IA ++  C  + +L   ++IHA  L + + I +   G   +  +C      +++  R++F
Sbjct: 60  IALLIRKCRSMRVL---RQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLF 116

Query: 343 DFISDKKIALWNAMITGYGQNEY-DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
             I    I  WN+MI G  Q++   +E ++LF KM       PN  TM+ V+ AC    A
Sbjct: 117 SQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSA 176

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
             + + +H + +K G G   +V+ AL++ Y++   I ++  +FD++  R+ V+W+TMI+G
Sbjct: 177 LEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISG 236

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G   +AL L R+MQ       +  V           P+ +T+++V+  C A  AL 
Sbjct: 237 YARIGLVNEALGLFRDMQ-------KAGVV----------PDEVTMVSVISACAASGALD 279

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            GK +HAY  + ++ TD+ + +ALV+MYAKCGC+  A+ VFD MPV++   W+ +I+   
Sbjct: 280 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA 339

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
           ++G  ++ LE    M        +VKPN VTFI + +AC+HSG+VSEG   +  M + +G
Sbjct: 340 INGLAEDALEEFFRM-----EEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FG 393

Query: 642 IEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIA 701
           I PS + Y C+VDLL RA  VEDA  L+  MP   +    W +LL  C+  +N++  E+ 
Sbjct: 394 IVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPV-IWRTLLVGCKKSKNLDKSEVV 452

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHK 761
           AQ L  LEP  A +Y+LLSN+Y+S   W+K   VRKKMK MG++  PGCS IE    +H+
Sbjct: 453 AQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHE 512

Query: 762 FLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIA 821
           F+ GD SH ++ ++   L ++S+R+   G+ P  S VLHNV +EEKE  LC HSE+LAIA
Sbjct: 513 FVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIA 572

Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           +G+L T     IR+ KNLRVC DCH+ TK IS    REII+RD  RFH F NG+CS
Sbjct: 573 YGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCS 628



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 191/378 (50%), Gaps = 25/378 (6%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCG----SDMWDVYKVFDRITEKDQVSWNSMI 152
           +QIHA ++ +   +SS++    L  + G C      D+    K+F +I   +  SWNSMI
Sbjct: 74  RQIHARLLTHAMPISSISFG--LCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMI 131

Query: 153 ATLCRF---GKWDLALEAFRMML---YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
               +     K  + L  FR M+   Y N  P++FT+  V  ACS +S    L  G+QVH
Sbjct: 132 RGCSQSQTPSKEPVIL--FRKMVRRGYPN--PNTFTMAFVLKACSIVS---ALEEGQQVH 184

Query: 207 GNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
            N L+ G  ++ F+  AL+  YAK   +  A  +F    DR+LV+W+T++S  ++     
Sbjct: 185 ANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVN 244

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSA 324
           EA+   R M   G+ PD V++ SV+ AC+    LDTGK +HAY   N  LI+    + +A
Sbjct: 245 EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYI--NKQLIETDLELSTA 302

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           LV+MY  C  +E  + VFD +  K    W++MI G   N   E+AL  F +MEE A + P
Sbjct: 303 LVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEE-AKVKP 361

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  T   V+ AC  S    +        ++ G+     +   ++D+  R   +E + T+ 
Sbjct: 362 NHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLV 421

Query: 445 DDMEVR-DTVSWNTMITG 461
           + M +  + V W T++ G
Sbjct: 422 ETMPISPNPVIWRTLLVG 439



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 155/296 (52%), Gaps = 9/296 (3%)

Query: 44  SWIESLRSEARSNQ-FREAILSYIEMTRSDI-QPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
           SW   +R  ++S    +E ++ + +M R     P+ F    VLKA + +  L  G+Q+HA
Sbjct: 126 SWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHA 185

Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
           +V+K G+G SS  V   LVN Y KC  D+    KVFD IT+++ V+W++MI+   R G  
Sbjct: 186 NVLKSGFG-SSPFVETALVNFYAKC-EDIVLASKVFDEITDRNLVAWSTMISGYARIGLV 243

Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN-SLRVGEWNTFIM 220
           + AL  FR M  + V P   T+VSV  AC+       L  G+ VH   + ++ E +  + 
Sbjct: 244 NEALGLFRDMQKAGVVPDEVTMVSVISACAA---SGALDTGKWVHAYINKQLIETDLELS 300

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            AL+ MYAK G ++ AK +F +   +D  +W++++  L+ N    +A+    +M    +K
Sbjct: 301 TALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVK 360

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
           P+ V+   VL AC+H  ++  G+   +  L   I+      G  +VD+ C    VE
Sbjct: 361 PNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYG-CMVDLLCRASLVE 415


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/619 (37%), Positives = 353/619 (57%), Gaps = 63/619 (10%)

Query: 299 LDTGKEIHAYALRNDILIDNSF--VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
           +D   +IHA  LR+++LI   +  +   L   Y +  ++     +F    D  + L+ A 
Sbjct: 40  VDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAA 99

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG--IHGHAIK 414
           I     N   ++A +L++++   + + PN  T SS++ +C        K G  IH H +K
Sbjct: 100 INTASINGLKDQAFLLYVQLLS-SQINPNEFTFSSILKSC------STKSGKLIHTHVLK 152

Query: 415 LGLGRDRYVQNALMDMYSR-------------------------------MGRIEISKTI 443
            GLG D YV   L+D+Y++                                G +E ++ +
Sbjct: 153 FGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARAL 212

Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
           FD M  RD VSWN MI GY+  G   DALML +++  + + K              PKP+
Sbjct: 213 FDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKL--LADGK--------------PKPD 256

Query: 504 SITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFD 563
            IT++  L  C  + AL  G+ IH +   + +  +V V +AL+DMY+KCG L  A  VF+
Sbjct: 257 EITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFN 316

Query: 564 LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHS 623
             P ++++ WN +I  Y MHG  Q+ L L   M  +G  G  ++P ++TFI    AC+H+
Sbjct: 317 DTPRKDIVAWNAMITGYAMHGYSQDALRLFDEM--QGITG--LQPTDITFIGTLQACAHA 372

Query: 624 GMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
           G+V+EG+ +F  M  +YGI+P  +HY C+V LLGRAG+++ AY++I  M  E D    WS
Sbjct: 373 GLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSV-LWS 431

Query: 684 SLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMG 743
           S+LG+C++H    +G+  A+ L       +  YVLLSNIY+    ++    VR  MKE G
Sbjct: 432 SVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKG 491

Query: 744 VRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVN 803
           + KEPG S IE  +++H+F AGD  H +S++++  L  +SER++  GYVP+T+ VLH++ 
Sbjct: 492 IVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLE 551

Query: 804 EEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILR 863
           E EKE  L  HSE+LAIA+G+++T PG+ +++ KNLRVC+DCH  TK ISKI  R+I++R
Sbjct: 552 ETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMR 611

Query: 864 DVRRFHHFKNGTCSCGDYW 882
           D  RFHHF +G+CSC D+W
Sbjct: 612 DRNRFHHFSDGSCSCDDFW 630



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 183/394 (46%), Gaps = 57/394 (14%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +F +  + D   + + I T    G  D A   +  +L S + P+ FT  S+  +CS  S 
Sbjct: 84  LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS- 142

Query: 196 RDGLRLGRQVHGNSLRVG--------------------------------EWNTFIMNAL 223
                 G+ +H + L+ G                                E +     A+
Sbjct: 143 ------GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAM 196

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPD 282
           +  YAK G V+ A+ LF    +RD+VSWN ++   SQ+    +A+M  +++   G  KPD
Sbjct: 197 ITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPD 256

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +++ + L ACS +  L+TG+ IH +   + I + N  V +AL+DMY  C  +E    VF
Sbjct: 257 EITVVAALSACSQIGALETGRWIHVFVNSSRIRL-NVKVCTALIDMYSKCGSLEEAVLVF 315

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +    K I  WNAMITGY  + Y ++AL LF +M+ + GL P   T    + AC  +   
Sbjct: 316 NDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLV 375

Query: 403 PDKEGIHGHAIKLGLGRDRYVQ------NALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
              EGI    I   +G++  ++        L+ +  R G+++ +  I  +M +  D+V W
Sbjct: 376 --NEGIQ---IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLW 430

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           ++++     C  HG+  ML +E+      +N +N
Sbjct: 431 SSVLGS---CKLHGE-FMLGKEIAEYLIGQNISN 460



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 177/407 (43%), Gaps = 65/407 (15%)

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           YA  G++  +  LF    D DL  +   +++ S N    +A +   Q+    I P+  + 
Sbjct: 72  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTF 131

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY----------------- 329
           +S+L +CS      +GK IH + L+  + +D  +V + LVD+Y                 
Sbjct: 132 SSILKSCS----TKSGKLIHTHVLKFGLGLD-PYVATGLVDIYAKGGDVVSAQKVFDRMP 186

Query: 330 ------------CNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
                       C  ++  VE  R +FD + ++ I  WN MI GY Q+ +  +ALMLF K
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246

Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
           +       P+  T+ + + AC +  A      IH       +  +  V  AL+DMYS+ G
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306

Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
            +E +  +F+D   +D V+WN MITGY + G   DAL L  EMQ                
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQG--------------- 351

Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYA 550
            +   +P  IT +  L  C     + +G +I       Y I+  +         LV +  
Sbjct: 352 -ITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEH----YGCLVSLLG 406

Query: 551 KCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE---GQEVLELL 593
           + G L  A  +   M +  + + W+ ++ +  +HGE   G+E+ E L
Sbjct: 407 RAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYL 453



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 45/281 (16%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           +A L Y+++  S I P+ F F ++LK+ +       GK IH HV+K+G GL    VA  L
Sbjct: 111 QAFLLYVQLLSSQINPNEFTFSSILKSCS----TKSGKLIHTHVLKFGLGLDPY-VATGL 165

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK------------------W 161
           V++Y K G D+    KVFDR+ E+  VS  +MI    + G                   W
Sbjct: 166 VDIYAK-GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSW 224

Query: 162 DLALEAFR--------MMLYSNV------EPSSFTLVSVALACSNLSRRDGLRLGRQVH- 206
           ++ ++ +         +ML+  +      +P   T+V+   ACS +     L  GR +H 
Sbjct: 225 NVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIG---ALETGRWIHV 281

Query: 207 -GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
             NS R+   N  +  AL+ MY+K G +++A  +F     +D+V+WN +++  + +    
Sbjct: 282 FVNSSRI-RLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQ 340

Query: 266 EAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
           +A+    +M  + G++P  ++    L AC+H  +++ G +I
Sbjct: 341 DALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQI 381



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 42/279 (15%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           +PD     A L A + I  L  G+ IH  V      L+ V V   L++MY KCGS + + 
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLN-VKVCTALIDMYSKCGS-LEEA 311

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSN 192
             VF+    KD V+WN+MI      G    AL  F  M   + ++P+  T +    AC++
Sbjct: 312 VLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAH 371

Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                                     ++N  + ++  +G+    K          +  + 
Sbjct: 372 AG------------------------LVNEGIQIFESMGQEYGIKP--------KIEHYG 399

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS-HLEMLDTGKEIHAYALR 311
            +VS L +  +   A   ++ M    ++ D V  +SVL +C  H E +  GKEI  Y + 
Sbjct: 400 CLVSLLGRAGQLKRAYEIIKNM---NMEADSVLWSSVLGSCKLHGEFM-LGKEIAEYLIG 455

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            +  I NS +   L ++Y    + E   +V + + +K I
Sbjct: 456 QN--ISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGI 492


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/654 (35%), Positives = 365/654 (55%), Gaps = 32/654 (4%)

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           DA     S E    V   T  + L +N    +  +  +Q+A +          S  P   
Sbjct: 36  DALDFGASTEGTGTVKTTTSSAPLDRNPTMNKIKLQTQQLAFQHPVTRNFDTQSHSPV-- 93

Query: 295 HLEMLDTG------KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           H  +L +G      +++HA+ + + +    S + + L+ + C    +   RR+F  + + 
Sbjct: 94  HEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLL-TKLISLVCTAGSITYARRLFPTVPNP 152

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
              L+++++    +  +  + ++ + +M   +G   +  T +SV+ AC    A    + I
Sbjct: 153 DSFLFDSLLKVTSKFGFSIDTVLFYRRML-FSGAPQSNYTFTSVIKACADLSALRLGKEI 211

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H H +  G G D YVQ AL+ +Y++   ++++K +FD M  R  ++WN++I+GY   G  
Sbjct: 212 HSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLP 271

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +++ L   M  ME                  +P+S T++++L  C  L AL  G  +H 
Sbjct: 272 QESIGLFHLM--MESGF---------------QPDSATIVSLLSSCSQLGALDFGCWLHD 314

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
           YA  N    +VV+G++L++MY +CG ++ AR VFD M  RNV+TW  +I  YGMHG G++
Sbjct: 315 YADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQ 374

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
            +EL   M A G R     PN +TF+A+ +AC+HSG++ +G  +F  MK+ YG+ P  +H
Sbjct: 375 AMELFTEMRAYGPR-----PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEH 429

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
             C+VD+ GRAG + DAYQ I    P+      W+S+LGACR+H+N ++G   A+++  +
Sbjct: 430 NVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSV 489

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP+   HYV+LSNIY+ A   D+   VR  M    ++K+ G S IE   + + F  GD S
Sbjct: 490 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKS 549

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H Q+  ++ +L+ L  R  + GYVP    ++H++ EEE++  L  HSEKLA+AFG+L T 
Sbjct: 550 HPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTN 609

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G TIR+ KNLR+C DCH A K IS I  REII+RD  RFHHFK+G+CSC DYW
Sbjct: 610 QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 211/413 (51%), Gaps = 27/413 (6%)

Query: 27  TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRS-DIQPDNFAFPAVLK 85
           TT +S PL  + T      +  ++ + +   F+  +      TR+ D Q  +    A+L+
Sbjct: 52  TTTSSAPLDRNPT------MNKIKLQTQQLAFQHPV------TRNFDTQSHSPVHEALLR 99

Query: 86  AVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ 145
           +   +++L   +Q+HAH++  G   S  ++   L+++    GS  +   ++F  +   D 
Sbjct: 100 SGPRLRNL---QQVHAHIIVSGLHRSR-SLLTKLISLVCTAGSITY-ARRLFPTVPNPDS 154

Query: 146 VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQV 205
             ++S++    +FG     +  +R ML+S    S++T  SV  AC++LS    LRLG+++
Sbjct: 155 FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLS---ALRLGKEI 211

Query: 206 HGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
           H + +  G   + ++  AL+A+YAK   +  AK +F +   R +++WN+++S   QN   
Sbjct: 212 HSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLP 271

Query: 265 LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
            E++     M   G +PD  +I S+L +CS L  LD G  +H YA  N   + N  +G++
Sbjct: 272 QESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDL-NVVLGTS 330

Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
           L++MY  C  V   R VFD + ++ +  W AMI+GYG + Y  +A+ LF +M    G  P
Sbjct: 331 LINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEM-RAYGPRP 389

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALMDMYSRMG 435
           N  T  +V+ AC  S    D   +   ++K   G    V++   ++DM+ R G
Sbjct: 390 NNITFVAVLSACAHSGLIDDGRRVFS-SMKEAYGLVPGVEHNVCMVDMFGRAG 441


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/527 (41%), Positives = 321/527 (60%), Gaps = 24/527 (4%)

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M+ GY      ++AL LF  + + +G   +  T+++   AC         + IH HAIK 
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHK-SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA 59

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           G   D +V + ++DMY + G +  +  +F+ +   D V+W +MI+G   C  +G+    L
Sbjct: 60  GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG---CVDNGNEDQAL 116

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
           R    M +               R  P+  T  T++     ++AL +G+++HA  I+   
Sbjct: 117 RIYHRMRQS--------------RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 162

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
            +D  VG++LVDMYAKCG +  A R+F  M VRN+  WN +++    HG  +E + L K+
Sbjct: 163 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKS 222

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M + G     ++P+ V+FI + +ACSH+G+ SE  +  + M +DYGIEP  +HY+C+VD 
Sbjct: 223 MKSHG-----IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDA 277

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGRAG V++A ++I  MP +   A    +LLGACRI  +VE G+  A  LF LEP  ++ 
Sbjct: 278 LGRAGLVQEADKVIETMPFKA-SASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAA 336

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           YVLLSNIY++A  WD   D RK MK   V+K+PG SWI+  + +H F+  D SH Q++ +
Sbjct: 337 YVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADII 396

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
           +  +E + + +R++GYVPDT  VL +V +EEKE  L  HSEKLAIA+G+++TP  TTIRV
Sbjct: 397 YDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRV 456

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC DCH A K+ISK+  REI+LRD  RFHHF++G CSCGDYW
Sbjct: 457 IKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 26/352 (7%)

Query: 56  NQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
           N  ++A+  +  + +S  + D        KA   +  L  GKQIHAH +K G+  S + V
Sbjct: 9   NDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD-SDLHV 67

Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
            + +++MY KCG DM +   VF+ I+  D V+W SMI+     G  D AL  +  M  S 
Sbjct: 68  NSGILDMYIKCG-DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR 126

Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
           V P  +T  ++  A S ++    L  GRQ+H N +++    + F+  +L+ MYAK G ++
Sbjct: 127 VMPDEYTFATLIKASSCVT---ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 183

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
           DA  LFK    R++  WN ++  L+Q+    EAV   + M   GI+PD VS   +L ACS
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIALW 353
           H  +     E + +++ ND  I+      S LVD       V+   +V + +  K  A  
Sbjct: 244 HAGLTSEAYE-YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASI 302

Query: 354 NAMITG------------------YGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           N  + G                  +    +D  A +L   +   A  W + T
Sbjct: 303 NRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 354



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 158/312 (50%), Gaps = 15/312 (4%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           ALE F ++  S  +    TL + A AC  L   D    G+Q+H ++++ G + +  + + 
Sbjct: 14  ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ---GKQIHAHAIKAGFDSDLHVNSG 70

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MY K G + +A  +F      D V+W +++S    N    +A+    +M    + PD
Sbjct: 71  ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 130

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             + A+++ A S +  L+ G+++HA  ++ D + D  FVG++LVDMY  C  +E   R+F
Sbjct: 131 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRLF 189

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----VR 398
             ++ + IALWNAM+ G  Q+   EEA+ LF  M+   G+ P+  +   ++ AC    + 
Sbjct: 190 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS-HGIEPDRVSFIGILSACSHAGLT 248

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
           SEA+   E +H      G+  +    + L+D   R G ++ +  + + M  + + S N  
Sbjct: 249 SEAY---EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 305

Query: 459 ITGYTICGQHGD 470
           + G   C   GD
Sbjct: 306 LLG--ACRIQGD 315


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/530 (40%), Positives = 323/530 (60%), Gaps = 24/530 (4%)

Query: 353 WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHA 412
           WN++I G  +  ++E+AL  F KM     +  +  T+ SV+ +    +   +   +H   
Sbjct: 9   WNSLILGCVREGFEEDALSFFQKMRS-RDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67

Query: 413 IKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDAL 472
           IK G    + V NAL+DMY++ G+++ +  +F  M  +D VSW +++TGY+  G + +A+
Sbjct: 68  IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127

Query: 473 MLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR 532
            L  +M+        + VY          P+ I + +VL  C  L+ +  G++IHA  ++
Sbjct: 128 KLFCKMR-------ISGVY----------PDQIAVASVLSACAELTVMDFGQQIHATLVK 170

Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLEL 592
           + L + + V ++LV MYAKCG +  A R FD MP R+VI+W  +I+ Y  +G G+  L+ 
Sbjct: 171 SGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQF 230

Query: 593 LKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV 652
              M+A G+     KP+ +TFI L  ACSH+G++  G   F  M   YGI+P P+HYAC+
Sbjct: 231 YDQMIATGT-----KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACM 285

Query: 653 VDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDV 712
           +DLLGR+GK+ +A  L+N M    D A  W +LL ACR+H+ +E+GE+AA+NLF LEP  
Sbjct: 286 IDLLGRSGKLAEAKGLLNQMVVAPD-AVVWKALLAACRVHKELELGEMAAKNLFELEPMN 344

Query: 713 ASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           +  YV+LSN+YS+A  W+ A  +R+ M+  G+ KEPG SWIE   ++  F++ D +H   
Sbjct: 345 SMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLR 404

Query: 773 EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTT 832
            +++  ++ +   +++ GYVPD S  LH+ ++E KE  L  HSEKLA+AFG+L  P G  
Sbjct: 405 NEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAP 464

Query: 833 IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           IR+ KNLRVC DCH A K+ SK+ +R IILRD   FHHF  G CSCGDYW
Sbjct: 465 IRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 28/331 (8%)

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
           D+VSWNS+I    R G  + AL  F+ M   +++   +TL SV    ++ +    ++   
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSV---LNSFASMKVMQNAI 61

Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
            VH   ++ G E    + NAL+ MYAK G++D A  +F    D+D+VSW ++V+  S N 
Sbjct: 62  SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDN 318
            + EA+    +M + G+ PD +++ASVL AC+ L ++D G++IHA      L + + +DN
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           S     LV MY  C  +    R FD +  + +  W A+I GY QN   + +L  + +M  
Sbjct: 182 S-----LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM-I 235

Query: 379 VAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
             G  P+  T   ++ AC  +         F   + ++G    +  G + Y    ++D+ 
Sbjct: 236 ATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG----IKPGPEHYA--CMIDLL 289

Query: 432 SRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            R G++  +K + + M V  D V W  ++  
Sbjct: 290 GRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 132/248 (53%), Gaps = 7/248 (2%)

Query: 58  FREAILSYIEMTRS-DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA 116
           F E  LS+ +  RS D++ D +  P+VL + A ++ +     +H  ++K G+    + V 
Sbjct: 21  FEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKL-VN 79

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N L++MY K G  +     VF ++ +KD VSW S++      G ++ A++ F  M  S V
Sbjct: 80  NALIDMYAKQGK-LDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGV 138

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
            P    + SV  AC+ L+  D    G+Q+H   ++ G E +  + N+L+ MYAK G + D
Sbjct: 139 YPDQIAVASVLSACAELTVMD---FGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVD 195

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A   F +   RD++SW  ++   +QN +   ++ F  QM   G KPD ++   +L ACSH
Sbjct: 196 ANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSH 255

Query: 296 LEMLDTGK 303
             +L +G+
Sbjct: 256 NGLLGSGR 263



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   + +  + EAI  + +M  S + PD  A  +VL A A +  +  G+QIHA +
Sbjct: 109 SWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATL 168

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G   SS++V N+LV MY KCGS + D  + FD +  +D +SW ++I    + G+   
Sbjct: 169 VKSGLE-SSLSVDNSLVTMYAKCGS-IVDANRAFDNMPTRDVISWTALIVGYAQNGRGKH 226

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           +L+ +  M+ +  +P   T + +  ACS+
Sbjct: 227 SLQFYDQMIATGTKPDYITFIGLLFACSH 255



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 25/240 (10%)

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           ME  D VSWN++I G    G   DAL   ++M++ +                  K +  T
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDM-----------------KIDEYT 43

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L +VL    ++  +     +H   I+       +V +AL+DMYAK G L+ A  VF  M 
Sbjct: 44  LPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMV 103

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            ++V++W  ++  Y  +G  +E ++L   M   G     V P+++   ++ +AC+   ++
Sbjct: 104 DKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISG-----VYPDQIAVASVLSACAELTVM 158

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
             G  +   +    G+E S      +V +  + G + DA +  + MP       +W++L+
Sbjct: 159 DFGQQIHATLVKS-GLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTR--DVISWTALI 215


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/719 (33%), Positives = 383/719 (53%), Gaps = 50/719 (6%)

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGRVDD 235
           P  FT   V   C+ L   D    GR  H  ++R+G    + +  N+L+A YA+LG VDD
Sbjct: 106 PDRFTFPVVLKCCARLGALDE---GRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDD 162

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRGIKPDGVSIASVLPAC 293
           A+ +F     RD+V+WN++V     N     A++  R+M  AL  ++ DGV I + L AC
Sbjct: 163 AERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALE-VQHDGVGIIAALAAC 221

Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
                L  G+E+HAY +R+ +  D   VG++++DMYC C ++     VF  +  + +  W
Sbjct: 222 CLESALMQGREVHAYVIRHGMEHDVK-VGTSILDMYCKCGDIASAEGVFATMPSRTVVTW 280

Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
           N MI GY  NE  EEA   F++M+   G      T  +++ AC ++E+      +HG+  
Sbjct: 281 NCMIGGYALNERPEEAFDCFVQMK-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYIT 339

Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
           +        ++ AL++MYS++G+++ S+ +F  M  +  VSWN MI  Y     + +A+ 
Sbjct: 340 RRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAIT 399

Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRN 533
           L  ++ N         +Y          P+  T+  V+P    L  L + +++H+Y IR 
Sbjct: 400 LFLDLLN-------QPLY----------PDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRL 442

Query: 534 MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELL 593
               + ++ +A++ MYA+CG +  +R +FD M  ++VI+WN +IM Y +HG+G+  LE+ 
Sbjct: 443 GYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMF 502

Query: 594 KNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVV 653
             M   G     ++PNE TF+++  ACS SG+  EG   F  M+ DYG+ P  +HY C+ 
Sbjct: 503 SEMKCNG-----LRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMT 557

Query: 654 DLLGRAGKVEDAYQLINMMP--PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
           DLLGRAG +++  Q I  MP  P F     W SLL A R   +++I E AA+ +F LE D
Sbjct: 558 DLLGRAGDLKEVMQFIENMPIDPTFR---VWGSLLTASRNRNDIDIAEYAAERIFQLEQD 614

Query: 712 VASH-----YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
              H     YVL+S++Y+ A  W     ++  M+E G+R+    S +E       F+ GD
Sbjct: 615 QLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGD 674

Query: 767 GSHQQS---EQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
            +H QS   +++  FL      MR      D + +     +  + T    HS +LA+ FG
Sbjct: 675 TTHPQSKMIQEVSNFLSGKIGEMRDPMNQSDPTSL-----DSRRTTEPNKHSVRLAVVFG 729

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +++T   T I V KN+R+CNDCH A K ISK   R I++ D   +H F +G+C CGDYW
Sbjct: 730 LISTEARTPILVKKNVRICNDCHHALKLISKYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 222/443 (50%), Gaps = 25/443 (5%)

Query: 74  QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDV 133
           +PD F FP VLK  A +  L  G+  H+  ++ G   + V   N+L+  Y + G  + D 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGL-VDDA 163

Query: 134 YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSN 192
            +VFD +  +D V+WNSM+      G   LAL  FR M  +  V+     +++   AC  
Sbjct: 164 ERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCL 223

Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            S    L  GR+VH   +R G E +  +  +++ MY K G +  A+ +F +   R +V+W
Sbjct: 224 ES---ALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTW 280

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N ++   + N++  EA     QM   G + + V+  ++L AC+  E    G+ +H Y  R
Sbjct: 281 NCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITR 340

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              L  +  + +AL++MY    +V+   +VF  ++ K +  WN MI  Y   E   EA+ 
Sbjct: 341 RQFL-PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAIT 399

Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
           LF+ +     L+P+  TMS+VVPA V          +H + I+LG G +  + NA+M MY
Sbjct: 400 LFLDLLN-QPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMY 458

Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           +R G +  S+ IFD M  +D +SWNTMI GY I GQ   AL +  EM+        N + 
Sbjct: 459 ARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKC-------NGL- 510

Query: 492 DLDETVLRPKPNSITLMTVLPGC 514
                    +PN  T ++VL  C
Sbjct: 511 ---------RPNESTFVSVLTAC 524



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 213/473 (45%), Gaps = 27/473 (5%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            +L+  +A  GR+DDA+    +   RD    N ++  L+       A+     M   G +
Sbjct: 46  KSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGAR 105

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
           PD  +   VL  C+ L  LD G+  H+ A+R  +   + + G++L+  Y     V+   R
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           VFD +  + +  WN+M+ GY  N     AL+ F +M E   +  +   + + + AC    
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           A      +H + I+ G+  D  V  +++DMY + G I  ++ +F  M  R  V+WN MI 
Sbjct: 226 ALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIG 285

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           GY +  +  +A     +M+    E ++  V              +T + +L  C    + 
Sbjct: 286 GYALNERPEEAFDCFVQMK---AEGHQVEV--------------VTAINLLAACAQTESS 328

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G+ +H Y  R      VV+ +AL++MY+K G +  + +VF  M  + +++WN +I AY
Sbjct: 329 LYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAY 388

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDD 639
                  E + L  +++ +      + P+  T  A+  A    G++ +   +  Y ++  
Sbjct: 389 MYKEMYMEAITLFLDLLNQ-----PLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLG 443

Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIH 692
           YG   +      ++ +  R G V  + ++ + M  +     +W++++    IH
Sbjct: 444 YG--ENTLIMNAIMHMYARCGDVLSSREIFDKMAAK--DVISWNTMIMGYAIH 492



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 2/153 (1%)

Query: 39  TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
           T+   SW   + +      + EAI  ++++    + PD F   AV+ A   +  L   +Q
Sbjct: 375 TKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQ 434

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +H+++++ GYG +++ + N +++MY +CG D+    ++FD++  KD +SWN+MI      
Sbjct: 435 MHSYIIRLGYGENTL-IMNAIMHMYARCG-DVLSSREIFDKMAAKDVISWNTMIMGYAIH 492

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
           G+   ALE F  M  + + P+  T VSV  ACS
Sbjct: 493 GQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 263/722 (36%), Positives = 385/722 (53%), Gaps = 33/722 (4%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P + +F  +L      +DL  GK IHA +++ G   SSV + N+LVN+Y KCGS +  
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTG-SFSSVYLTNSLVNLYAKCGS-IVK 63

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGK--WDLALEAFRMMLYSNVEPSSFTLVSVALAC 190
              VF+ IT KD VSWN +I    + G   +   +E F+ M   N  P+  T   V  A 
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAA 123

Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           S+     G   G Q H  +++    ++ F+ ++L+ MY K+G + DA+ +F +  +R+ V
Sbjct: 124 SSSPETFG---GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SW TI+S  +      EA      M       D     SVL A +  +++  GK+IH  A
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L+N +L   S VG+ALV MY  C  ++   + F+   DK    W+AMITGY Q     EA
Sbjct: 241 LKNGLLSIAS-VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEA 299

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L LF  M  + G  P+  T   V+ AC    A  + + IHG+++K G     Y   AL+D
Sbjct: 300 LNLFYNMH-LNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVD 358

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY++ G +  ++  FD ++  D V W +MI+GY   G++  AL L   MQ ME       
Sbjct: 359 MYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQ-ME------- 410

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                    R  P+ +T+ +VL  C +L+AL +GK+IHA  I+   + +V +GSAL  MY
Sbjct: 411 ---------RIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMY 461

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCG L     VF  MP R+++TWN +I     +GEG + LEL + +     R G  KP+
Sbjct: 462 AKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEEL-----RHGTTKPD 516

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
            VTF+ + +ACSH G+V  G   F  M D++GI P  +HYAC+VD+L RAGK+ +  + I
Sbjct: 517 YVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFI 576

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
                +      W  LLGACR ++N E+G  A + L  L    +S Y+LLS+IY++    
Sbjct: 577 ESATIDHGMC-LWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRS 635

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           D    VR+ MK  GV KEPGCSWIE   ++H F+ GD  H Q  ++   L  L + M+ E
Sbjct: 636 DDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDE 695

Query: 790 GY 791
            Y
Sbjct: 696 CY 697



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/354 (35%), Positives = 185/354 (52%), Gaps = 8/354 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A      EA   +  M R +   D F + +VL A+     +  GKQIH   
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G  LS  +V N LV MYGKCG  + D  K F+   +KD ++W++MI    + G    
Sbjct: 241 LKNGL-LSIASVGNALVTMYGKCGC-LDDALKTFELSGDKDDITWSAMITGYAQAGDSHE 298

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  F  M  +  +PS FT V V  ACS++     L  G+Q+HG SL+ G E   + M A
Sbjct: 299 ALNLFYNMHLNGNKPSEFTFVGVINACSDIG---ALEEGKQIHGYSLKAGYECQIYFMTA 355

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+ MYAK G + DA+  F   ++ D+V W +++S  +QN +   A+    +M +  I P 
Sbjct: 356 LVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPH 415

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
            +++ASVL ACS L  L+ GK+IHA  ++    ++   +GSAL  MY  C  +E G  VF
Sbjct: 416 ELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVP-IGSALSTMYAKCGSLEDGNLVF 474

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +  + I  WNAMI+G  QN    +AL LF ++       P+  T  +V+ AC
Sbjct: 475 RRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH-GTTKPDYVTFVNVLSAC 527



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 6/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A++    EA+  +  M  +  +P  F F  V+ A + I  L  GKQIH + 
Sbjct: 282 TWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYS 341

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K GY    +     LV+MY KCGS + D  K FD + E D V W SMI+   + G+ + 
Sbjct: 342 LKAGYE-CQIYFMTALVDMYAKCGS-LVDARKGFDYLKEPDIVLWTSMISGYAQNGENET 399

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  +  M    + P   T+ SV  ACS+L+    L  G+Q+H  +++ G      I +A
Sbjct: 400 ALTLYCRMQMERIMPHELTMASVLRACSSLA---ALEQGKQIHAQTIKYGFSLEVPIGSA 456

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MYAK G ++D   +F+    RD+++WN ++S LSQN + L+A+    ++     KPD
Sbjct: 457 LSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPD 516

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            V+  +VL ACSH+ +++ GK
Sbjct: 517 YVTFVNVLSACSHMGLVERGK 537


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/599 (37%), Positives = 353/599 (58%), Gaps = 29/599 (4%)

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           +  +L  C+    +   K  H   +R D+  D + + + L++ Y  C  VE  R+VFD +
Sbjct: 64  VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLL-NVLINAYSKCGFVELARQVFDGM 122

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC-VRSEAFPD 404
            ++ +  WN MI  Y +N  + EAL +F++M    G   +  T+SSV+ AC V  +A   
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALEC 181

Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
           K+ +H  ++K  +  + YV  AL+D+Y++ G I+ +  +F+ M+ + +V+W++M+ GY  
Sbjct: 182 KK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240

Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
              + +AL+L R  Q M  E+N+                  TL +V+  C  L+AL +GK
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQ-----------------FTLSSVICACSNLAALIEGK 283

Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
           ++HA   ++   ++V V S+ VDMYAKCG L  +  +F  +  +N+  WN II  +  H 
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343

Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
             +EV+ L + M  +G     + PNEVTF +L + C H+G+V EG   F  M+  YG+ P
Sbjct: 344 RPKEVMILFEKMQQDG-----MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398

Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD-KAGAWSSLLGACRIHQNVEIGEIAAQ 703
           +  HY+C+VD+LGRAG + +AY+LI  +P  FD  A  W SLL +CR+++N+E+ E+AA+
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIP--FDPTASIWGSLLASCRVYKNLELAEVAAE 456

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            LF LEP+ A ++VLLSNIY++ + W++    RK +++  V+K  G SWI+  D++H F 
Sbjct: 457 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFS 516

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFG 823
            G+  H +  ++   L+NL  + RK GY P     LH+V   +KE LL  HSEKLA+ FG
Sbjct: 517 VGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 576

Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           ++  P  + +R+ KNLR+C DCH+  K  S    R II+RDV RFHHF +G CSCGD+W
Sbjct: 577 LMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 8/302 (2%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K  H  +++       VT+ N L+N Y KCG  +    +VFD + E+  VSWN+MI   
Sbjct: 80  AKACHGKIIRIDLE-GDVTLLNVLINAYSKCGF-VELARQVFDGMLERSLVSWNTMIGLY 137

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            R      AL+ F  M     + S FT+ SV  AC      D L   +++H  S++   +
Sbjct: 138 TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG--VNCDALEC-KKLHCLSVKTCID 194

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N ++  AL+ +YAK G + DA  +F+S +D+  V+W+++V+   QN  + EA++  R+ 
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
               ++ +  +++SV+ ACS+L  L  GK++HA   ++     N FV S+ VDMY  C  
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAVDMYAKCGS 313

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +     +F  + +K + LWN +I+G+ ++   +E ++LF KM++  G+ PN  T SS++ 
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLS 372

Query: 395 AC 396
            C
Sbjct: 373 VC 374



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 6/294 (2%)

Query: 36  GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
           G   R   SW   +    R+    EA+  ++EM     +   F   +VL A     D   
Sbjct: 121 GMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE 180

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            K++H   VK    L ++ V   L+++Y KCG  + D  +VF+ + +K  V+W+SM+A  
Sbjct: 181 CKKLHCLSVKTCIDL-NLYVGTALLDLYAKCGM-IKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +   ++ AL  +R     ++E + FTL SV  ACSNL+    L  G+Q+H    + G  
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA---ALIEGKQMHAVICKSGFG 295

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
            N F+ ++ + MYAK G + ++  +F   ++++L  WNTI+S  +++ +  E ++   +M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
              G+ P+ V+ +S+L  C H  +++ G+           L  N    S +VD+
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 409



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 23/284 (8%)

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
           + N   +  ++  C R+ A  + +  HG  I++ L  D  + N L++ YS+ G +E+++ 
Sbjct: 58  FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQ 117

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD M  R  VSWNTMI  YT      +AL +  EM        RN  +   E       
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM--------RNEGFKFSE------- 162

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
              T+ +VL  CG      + K++H  +++  +  ++ VG+AL+D+YAKCG +  A +VF
Sbjct: 163 --FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220

Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
           + M  ++ +TW+ ++  Y  +   +E L L +      ++   ++ N+ T  ++  ACS+
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR-----AQRMSLEQNQFTLSSVICACSN 275

Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
              + EG  + + +    G   +    +  VD+  + G + ++Y
Sbjct: 276 LAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q +   +W   +    ++  + EA+L Y    R  ++ + F   +V+ A + +  L  GK
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HA + K G+G S+V VA++ V+MY KCGS + + Y +F  + EK+   WN++I+   +
Sbjct: 284 QMHAVICKSGFG-SNVFVASSAVDMYAKCGS-LRESYIIFSEVQEKNLELWNTIISGFAK 341

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR----RDGLRLGRQVHGNSLRVG 213
             +    +  F  M    + P+  T  S+   C +       R   +L R  +G S  V 
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
            +     + ++ +  + G + +A  L KS   D     W ++++S
Sbjct: 402 HY-----SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/727 (35%), Positives = 389/727 (53%), Gaps = 36/727 (4%)

Query: 83  VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMWDVYKVFDRIT 141
           VL+  A    +   K +H  V+K  +    + V  N   ++Y KC S+      VFD + 
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKC-SEFRAACGVFDEMP 182

Query: 142 EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRL 201
           +++  SW  MI      G +    + F  ML S + P  F   ++  +C  L   D L L
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGL---DSLEL 239

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           G+ VH   +  G   + F+  +L+ MYAKLG ++D+  +F    + + VSWN ++S  + 
Sbjct: 240 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 299

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NS 319
           N   LEA     +M      P+  ++ SV  A   L  ++ GKE+   A  +++ I+ N 
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA--SELGIEGNV 357

Query: 320 FVGSALVDMYCNCREVECGRRVFD--FISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
            VG+AL+DMY  C  +   R VFD  FI+      WNAMI+GY Q+   +EAL L+++M 
Sbjct: 358 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMC 417

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY-VQNALMDMYSRMGR 436
           +  G+  +  T  SV  A   S++      +HG  +K GL      V NA+ D YS+ G 
Sbjct: 418 Q-NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 476

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           +E  + +FD ME RD VSW T++T Y+      +AL     M+   EE            
Sbjct: 477 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR---EEG----------- 522

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                PN  T  +VL  C +L  L  G+++H    +  L T+  + SAL+DMYAKCG + 
Sbjct: 523 ---FAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 579

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A +VFD +   ++++W  II  Y  HG  ++ L+L + M   G     +K N VT + +
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG-----IKANAVTLLCV 634

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             ACSH GMV EG+  F +M+D YG+ P  +HYAC++DLLGR G+++DA + I  MP E 
Sbjct: 635 LFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEP 694

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
           ++   W +LLG CR+H NVE+GEIAA+ +  + P+ ++ YVLLSN Y     ++  + +R
Sbjct: 695 NEM-VWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLR 753

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
             MK+ GV+KEPG SWI     +HKF +GD  H Q ++++  LE L E+++  GYVPD  
Sbjct: 754 NVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLR 813

Query: 797 CVLHNVN 803
            VL+N +
Sbjct: 814 YVLNNAD 820



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 296/622 (47%), Gaps = 59/622 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +        F +    + EM  S I PD FA+ A++++  G+  L LGK +HA +
Sbjct: 188 SWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQI 247

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           V  G+  + + V+ +L+NMY K GS + D Y VF+ +TE +QVSWN+MI+     G    
Sbjct: 248 VMRGFA-THIFVSTSLLNMYAKLGS-IEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLE 305

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           A + F  M      P+ +TLVSV+ A   L     + +G++V   +  +G E N  +  A
Sbjct: 306 AFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD---VNMGKEVQNCASELGIEGNVLVGTA 362

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVS------WNTIVSSLSQNDKFLEAVMFLRQMAL 276
           L+ MY+K G + DA+++F    D + ++      WN ++S  SQ+    EA+    QM  
Sbjct: 363 LIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            GI  D  +  SV  A +  + L  G+ +H   L+  + +    V +A+ D Y  C  +E
Sbjct: 419 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLE 478

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R+VFD + ++ I  W  ++T Y Q+   EEAL  F  M E  G  PN  T SSV+ +C
Sbjct: 479 DVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE-EGFAPNQFTFSSVLISC 537

Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
                      +HG   K GL  ++ +++AL+DMY++ G I  +  +FD +   D VSW 
Sbjct: 538 ASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWT 597

Query: 457 TMITGYTICGQHG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
            +I+GY    QHG   DAL L R M+                 +   K N++TL+ VL  
Sbjct: 598 AIISGY---AQHGLVEDALQLFRRME-----------------LSGIKANAVTLLCVLFA 637

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVG-----SALVDMYAKCGCLNFARRVFDLMPVR 568
           C     + +G     +  + M     VV      + ++D+  + G L+ A      MP+ 
Sbjct: 638 CSHGGMVEEG----LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPME 693

Query: 569 -NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN-EVTFIALFAACSHSGMV 626
            N + W  ++    +HG   E+ E+    +        ++P    T++ L      +G  
Sbjct: 694 PNEMVWQTLLGGCRVHGN-VELGEIAARKIL------SIRPEYSATYVLLSNTYIETGSY 746

Query: 627 SEGMDLFYKMKDDYGIEPSPDH 648
            +G+ L   MKD  G++  P +
Sbjct: 747 EDGLSLRNVMKDQ-GVKKEPGY 767


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/536 (41%), Positives = 324/536 (60%), Gaps = 32/536 (5%)

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK---EGI 408
           LW+    GY +N     +L LF  M  +A    +    ++ + A   S   PD+     +
Sbjct: 166 LWH---FGYVRNNLVYHSLELFRAM--IASDSASVVDEAAALVAFSASARVPDRGVTASL 220

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTICG 466
           H    K+G  R+  V N ++D Y++ G   +E+++ +FD ME RD VSWN+MI  Y   G
Sbjct: 221 HALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNG 279

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +A+ L  +M N+                   K N++ L  VL  C    A+  GK I
Sbjct: 280 MSAEAIGLYSKMLNVGGGI---------------KCNAVALSAVLLACAHAGAIQTGKRI 324

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H   +R  L  +V VG+++VDMY+KCG +  A R F  +  +N+++W+ +I  YGMHG G
Sbjct: 325 HNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRG 384

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
           QE LE+   M   G     ++PN +TFI++ AACSH+G++ EG   +  MK ++GIE   
Sbjct: 385 QEALEIFTEMKRSG-----LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 439

Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
           +HY C+VDLLGRAG +++AY LI  M  + D A  W +LL ACRIH+NVE+ E++ + LF
Sbjct: 440 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPD-AAIWGALLSACRIHKNVELAEMSVKRLF 498

Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
            L+   + +YVLLSNIY+ A++W     +R  +K   + K PG S  E   +I+ F  GD
Sbjct: 499 ELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGD 558

Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
            SH Q  +++ +LE L ERM++ GYVP+T  VLH+++EEEKE+ L  HSEKLA+AF ++N
Sbjct: 559 KSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMN 618

Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           + P + I + KNLRVC+DCH A KFI+KI  REII+RD++RFHHFK+G CSC DYW
Sbjct: 619 SVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 180/337 (53%), Gaps = 18/337 (5%)

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           +LE FR M+ S+   S     +  +A S  +R     +   +H    ++G E N  ++N 
Sbjct: 180 SLELFRAMIASD-SASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNT 238

Query: 223 LMAMYAKLGRVD--DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM--ALRG 278
           ++  YAK G  D   A+ +F + E RD+VSWN++++  +QN    EA+    +M     G
Sbjct: 239 MLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGG 297

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           IK + V++++VL AC+H   + TGK IH   +R   L +N +VG+++VDMY  C  VE  
Sbjct: 298 IKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMG-LEENVYVGTSIVDMYSKCGRVEMA 356

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
            R F  I +K I  W+AMITGYG +   +EAL +F +M+  +GL PN  T  SV+ AC  
Sbjct: 357 SRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR-SGLRPNYITFISVLAAC-- 413

Query: 399 SEAFPDKEGIHGH-AIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
           S A    EG + + A+K   G +  V++   ++D+  R G ++ + ++  +M+V+ D   
Sbjct: 414 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 473

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
           W  +++    C  H +  +    ++ + E    N+ Y
Sbjct: 474 WGALLSA---CRIHKNVELAEMSVKRLFELDASNSGY 507



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 178/365 (48%), Gaps = 35/365 (9%)

Query: 7   CLTLLPSPPLSSLQTHQPPATTATSL-PLPGSQTRCKESWIESLRSEARSNQFREAILSY 65
           C T +P P        +P   +  SL P P S       ++       R+N    ++  +
Sbjct: 139 CTTTVPVP-------WKPAGRSTKSLTPTPSSSPLWHFGYV-------RNNLVYHSLELF 184

Query: 66  IEMTRSDIQP--DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY 123
             M  SD     D  A      A A + D  +   +HA + K G+  ++  V NT+++ Y
Sbjct: 185 RAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNA-GVVNTMLDSY 243

Query: 124 GKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY--SNVEPSS 180
            K GS D+    KVFD + E+D VSWNSMIA   + G    A+  +  ML     ++ ++
Sbjct: 244 AKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNA 302

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
             L +V LAC++      ++ G+++H   +R+G E N ++  +++ MY+K GRV+ A   
Sbjct: 303 VALSAVLLACAHAG---AIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRA 359

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+  ++++++SW+ +++    + +  EA+    +M   G++P+ ++  SVL ACSH  +L
Sbjct: 360 FRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLL 419

Query: 300 DTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKI----ALWN 354
           D G+  +  A++ +  I+        +VD+        C    +  I + K+    A+W 
Sbjct: 420 DEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLG---RAGCLDEAYSLIKEMKVKPDAAIWG 475

Query: 355 AMITG 359
           A+++ 
Sbjct: 476 ALLSA 480


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/708 (33%), Positives = 372/708 (52%), Gaps = 70/708 (9%)

Query: 221  NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
            N L+ +YAK   +  A+ LF     R+  +W  ++S  ++           R+M  +G  
Sbjct: 328  NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387

Query: 281  PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
            P+  +++SVL  CS    L  GK +HA+ LRN I +D   +G++++D+Y  C+  E   R
Sbjct: 388  PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVD-VVLGNSILDLYLKCKVFEYAER 446

Query: 341  VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM------------------------ 376
            +F+ +++  +  WN MI  Y +    E++L +F ++                        
Sbjct: 447  LFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHA 506

Query: 377  -EEVAGLWPNATTMSSVV--PACVRSEAFPDKE---GIHGHAIKLGLGRDRYVQNALMDM 430
             E++  +    T  S+V    A + + +    E    +HG  +K G   D +++++L++M
Sbjct: 507  LEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEM 566

Query: 431  YSRMGRIEISKTIFDDMEV----------------RDTVSWNTMITGYTICGQHGDALML 474
            Y + GR++ +  I  D+ +                   VSW +M++GY   G++ D L  
Sbjct: 567  YCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKT 626

Query: 475  LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
             R M           V +L    +R      T+ T++  C     L  G+ +HAY  +  
Sbjct: 627  FRLM-----------VRELVVVDIR------TVTTIISACANAGILEFGRHVHAYVQKIG 669

Query: 535  LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
               D  VGS+L+DMY+K G L+ A  VF      N++ W  +I  Y +HG+G   + L +
Sbjct: 670  HRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFE 729

Query: 595  NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
             M+ +G     + PNEVTF+ +  ACSH+G++ EG   F  MKD Y I P  +H   +VD
Sbjct: 730  EMLNQG-----IIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVD 784

Query: 655  LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
            L GRAG +      I            W S L +CR+H+NVE+G+  ++ L  + P    
Sbjct: 785  LYGRAGHLTKTKNFI-FKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPG 843

Query: 715  HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
             YVLLSN+ +S   WD+A  VR  M + GV+K+PG SWI+  D+IH F+ GD SH Q ++
Sbjct: 844  AYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDE 903

Query: 775  LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIR 834
            ++ +L+ L  R+++ GY  D   V+ +V EE+ E L+  HSEKLA+ FGI+NT   T IR
Sbjct: 904  IYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIR 963

Query: 835  VAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            + KNLR+C DCH   K+ S++  REII+RD+ RFHHFK+G+CSCGDYW
Sbjct: 964  IIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 227/512 (44%), Gaps = 83/512 (16%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           +HA  VK G  L ++  AN L+ +Y K  ++M    K+FD I +++  +W  +I+   R 
Sbjct: 311 LHALYVKNG-SLQTLNPANHLLTLYAK-SNNMAHAQKLFDEIPQRNTQTWTILISGFARA 368

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG----- 213
           G  ++    FR M      P+ +TL SV   CS     + L+LG+ VH   LR G     
Sbjct: 369 GSSEMVFNLFREMQAKGACPNQYTLSSVLKCCS---LDNNLQLGKGVHAWMLRNGIDVDV 425

Query: 214 ---------------------------EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
                                      E +    N ++  Y + G V+ +  +F+    +
Sbjct: 426 VLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK 485

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
           D+VSWNTIV  L Q      A+  L  M   G +   V+ +  L   S L  ++ G+++H
Sbjct: 486 DVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLH 545

Query: 307 AYALRNDILIDNSFVGSALVDMYCNC----------REV--ECGRRVFDFISDKK----I 350
              L+     D  F+ S+LV+MYC C          R+V  +  R+    +S K+    I
Sbjct: 546 GMVLKFGFDSDG-FIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGI 604

Query: 351 ALWNAMITGYGQNEYDEEALMLF-IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
             W +M++GY  N   E+ L  F + + E+  +  +  T+++++ AC  +        +H
Sbjct: 605 VSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVV--DIRTVTTIISACANAGILEFGRHVH 662

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
            +  K+G   D YV ++L+DMYS+ G ++ +  +F      + V W +MI+GY + GQ  
Sbjct: 663 AYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGM 722

Query: 470 DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH-- 527
            A+ L  EM              L++ ++   PN +T + VL  C     + +G      
Sbjct: 723 HAIGLFEEM--------------LNQGII---PNEVTFLGVLNACSHAGLIEEGCRYFRM 765

Query: 528 ---AYAIRNMLATDVVVGSALVDMYAKCGCLN 556
              AY I       V   +++VD+Y + G L 
Sbjct: 766 MKDAYCIN----PGVEHCTSMVDLYGRAGHLT 793



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 220/474 (46%), Gaps = 63/474 (13%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R  ++W   +   AR+         + EM      P+ +   +VLK  +   +L LGK +
Sbjct: 353 RNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGV 412

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA +++ G  +  V + N+++++Y KC    +   ++F+ + E D VSWN MI    R G
Sbjct: 413 HAWMLRNGIDV-DVVLGNSILDLYLKCKVFEY-AERLFELMNEGDVVSWNIMIGAYLRAG 470

Query: 160 KWDLALEAFRMMLYSNVEP----------------------------SSFTLVSVALACS 191
             + +L+ FR + Y +V                              + F+ V+ ++A  
Sbjct: 471 DVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALI 530

Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFK--------- 241
             S    + LGRQ+HG  L+ G + + FI ++L+ MY K GR+D A  + +         
Sbjct: 531 LASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRK 590

Query: 242 -----SFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
                S+++    +VSW ++VS    N K+ + +   R M    +  D  ++ +++ AC+
Sbjct: 591 GNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACA 650

Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
           +  +L+ G+ +HAY  +    ID ++VGS+L+DMY     ++    VF   ++  I +W 
Sbjct: 651 NAGILEFGRHVHAYVQKIGHRID-AYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWT 709

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           +MI+GY  +     A+ LF +M    G+ PN  T   V+ AC  S A   +EG       
Sbjct: 710 SMISGYALHGQGMHAIGLFEEMLN-QGIIPNEVTFLGVLNAC--SHAGLIEEGCR----Y 762

Query: 415 LGLGRDRYVQN-------ALMDMYSRMGRIEISKT-IFDDMEVRDTVSWNTMIT 460
             + +D Y  N       +++D+Y R G +  +K  IF +     T  W + ++
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLS 816



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 17/226 (7%)

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
           +LFI     +  +P     S  +     S + P    +H   +K G  +     N L+ +
Sbjct: 274 LLFIGFSISSYFYPPLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTL 333

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y++   +  ++ +FD++  R+T +W  +I+G+   G       L REMQ           
Sbjct: 334 YAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKG-------- 385

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
                      PN  TL +VL  C   + L  GK +HA+ +RN +  DVV+G++++D+Y 
Sbjct: 386 ---------ACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYL 436

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
           KC    +A R+F+LM   +V++WN++I AY   G+ ++ L++ + +
Sbjct: 437 KCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL 482



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 16/118 (13%)

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           +HA  ++N     +   + L+ +YAK   +  A+++FD +P RN  TW ++I  +   G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS-----------HSGMVSEGMDL 632
            + V  L + M A+G+      PN+ T  ++   CS           H+ M+  G+D+
Sbjct: 371 SEMVFNLFREMQAKGA-----CPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDV 423


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/763 (31%), Positives = 416/763 (54%), Gaps = 44/763 (5%)

Query: 30  TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
            SLP P +      +    +   +      + + +Y  M ++ +  D + FP++LKA + 
Sbjct: 18  VSLPHPATTNSVNAT----INHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSF 73

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY-KVFDRITEKDQVSW 148
           +   SLG  +H  ++  G  L +  +A++L+N Y K G    DV  KVFD + E++ V W
Sbjct: 74  LNLFSLGLTLHQRILVSGLSLDAY-IASSLINFYAKFG--FADVARKVFDYMPERNVVPW 130

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
            ++I    R G+   A   F  M    ++PSS T++S+    S L+    L      HG 
Sbjct: 131 TTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCL------HGC 184

Query: 209 SLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA 267
           ++  G  +   + N+++ +Y K G ++ ++ LF   + RDLVSWN+++S+ +Q     E 
Sbjct: 185 AILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEV 244

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           ++ L+ M L+G +    +  SVL   +    L  G+ +H   LR    +D + V ++L+ 
Sbjct: 245 LLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLD-AHVETSLIV 303

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           +Y    +++   R+F+  SDK + LW AMI+G  QN   ++AL +F +M +  G+ P+  
Sbjct: 304 VYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF-GVKPSTA 362

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           TM+SV+ AC +  ++     I G+ ++  L  D   QN+L+ MY++ G ++ S  +FD M
Sbjct: 363 TMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMM 422

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             RD VSWN M+TGY   G   +AL L  EM++  +                  P+SIT+
Sbjct: 423 NRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQ-----------------TPDSITI 465

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           +++L GC +   L  GK IH++ IRN L   ++V ++LVDMY KCG L+ A+R F+ MP 
Sbjct: 466 VSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPS 525

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
            ++++W+ II+ YG HG+G+  L      +  G     +KPN V F+++ ++CSH+G+V 
Sbjct: 526 HDLVSWSAIIVGYGYHGKGEAALRFYSKFLESG-----MKPNHVIFLSVLSSCSHNGLVE 580

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE--FDKAGAWSSL 685
           +G++++  M  D+GI P  +H+ACVVDLL RAG+VE+AY +     P+   D  G    +
Sbjct: 581 QGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGI---I 637

Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
           L ACR + N E+G+  A ++ +L P  A ++V L++ Y+S   W++  +    M+ +G++
Sbjct: 638 LDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLK 697

Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
           K PG S+I+    I  F     SH Q +++   L+ L + M K
Sbjct: 698 KIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKILRKEMIK 740


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/692 (33%), Positives = 380/692 (54%), Gaps = 35/692 (5%)

Query: 198 GLRLGRQVHGN------SLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
            L+ GR +H +      + R  + N   +N+L+ +Y K   V  A+ LF S   R++VSW
Sbjct: 34  NLKFGRTIHAHLTITNHNYRDSKVNQ--LNSLINLYVKCDEVSIARKLFDSMPRRNVVSW 91

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           + +++   QN   LE     ++M ++  I P+   IA+ + +C   +M   GK+ H YAL
Sbjct: 92  SALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS-QMYVEGKQCHGYAL 150

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
           ++ +   + +V +AL+ +Y  C +V    ++   +    I  +N ++ G  Q+ +  EA+
Sbjct: 151 KSGLEF-HQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAV 209

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
            +   +      W NAT ++ +   C   +     + +H   +K  +  D Y+ ++++DM
Sbjct: 210 DVLKLIISEGIEWNNATYVT-IFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDM 268

Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
           Y + G +   +T FD ++ R+ VSW ++I  Y       +AL L  +M            
Sbjct: 269 YGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM------------ 316

Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
               E    P PN  T+  +      LSAL  G ++HA A ++ L  +V+VG+AL+ MY 
Sbjct: 317 ----EIDCIP-PNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYF 371

Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE 610
           K G +  A+ VF  M   N+ITWN II  +  HG G+E L + ++M+A G R     PN 
Sbjct: 372 KSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGER-----PNY 426

Query: 611 VTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
           VTFI +  AC+H  +V EG   F  +   + I P  +HY C+V LL R+G++++A   + 
Sbjct: 427 VTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMR 486

Query: 671 MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
                +D   +W +LL AC +H++ + G   A+ L  LEP     Y+LLSN+++  + WD
Sbjct: 487 SHQINWDVV-SWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWD 545

Query: 731 KAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
             +++RK M+E  V+KEPG SW+E  +  H F + D  H ++  ++  +++L  ++R  G
Sbjct: 546 HVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLG 605

Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
           YVPD   VLH++ +E+K   L  HSEKLA+A+G++ TP G  I V KNLR+C+DCH A K
Sbjct: 606 YVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIK 665

Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            ISK+ +R I++RD  RFHHF+NG CSCGDYW
Sbjct: 666 LISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 267/523 (51%), Gaps = 39/523 (7%)

Query: 83  VLKAVAGIQDLSLGKQIHAH--VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI 140
           +LK  A  ++L  G+ IHAH  +  + Y  S V   N+L+N+Y KC  ++    K+FD +
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKC-DEVSIARKLFDSM 83

Query: 141 TEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
             ++ VSW++++A   + G      E F +M++  N+ P+ + + +   +C +    +  
Sbjct: 84  PRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-- 141

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
             G+Q HG +L+ G E++ ++ NAL+ +Y+K   V  A  +  +    D+  +N +V+ L
Sbjct: 142 --GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGL 199

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            Q+    EAV  L+ +   GI+ +  +  ++   C+ L+ +  GK++HA  L++DI  D 
Sbjct: 200 LQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCD- 258

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            ++GS+++DMY  C  V  GR  FD +  + +  W ++I  Y QNE+ EEAL LF KM E
Sbjct: 259 VYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM-E 317

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +  + PN  TM+ +  +     A    + +H  A K GL  +  V NAL+ MY + G I 
Sbjct: 318 IDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDIL 377

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            ++++F +M   + ++WN +ITG++  G   +AL + ++M    E               
Sbjct: 378 AAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGE--------------- 422

Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG----SALVDMYAKCGC 554
             +PN +T + V+  C  L  + +G     Y    M    +V G    + +V + ++ G 
Sbjct: 423 --RPNYVTFIGVILACAHLKLVDEG---FYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGR 477

Query: 555 LNFARRVFDLMPVR-NVITWNVIIMAYGMH---GEGQEVLELL 593
           L+ A        +  +V++W  ++ A  +H    +G+++ E L
Sbjct: 478 LDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYL 520



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 142/270 (52%), Gaps = 9/270 (3%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDL 93
           +PG+   C    +  L    +     EA+     +    I+ +N  +  + +  A ++D+
Sbjct: 184 VPGNDIFCYNLVVNGL---LQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDI 240

Query: 94  SLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIA 153
           +LGKQ+HA ++K       V + +++++MYGKCG ++      FDR+  ++ VSW S+IA
Sbjct: 241 TLGKQVHAQMLKSDID-CDVYIGSSIIDMYGKCG-NVLSGRTFFDRLQSRNVVSWTSIIA 298

Query: 154 TLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
              +   ++ AL  F  M    + P+ +T+  +  + + LS    L LG Q+H  + + G
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLS---ALCLGDQLHARAEKSG 355

Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + N  + NAL+ MY K G +  A+++F +    ++++WN I++  S +    EA+   +
Sbjct: 356 LKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQ 415

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTG 302
            M   G +P+ V+   V+ AC+HL+++D G
Sbjct: 416 DMMATGERPNYVTFIGVILACAHLKLVDEG 445



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q+R   SW   + +  ++  F EA+  + +M    I P+ +    +  + AG+  L LG 
Sbjct: 286 QSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGD 345

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HA   K G    +V V N L+ MY K G D+     VF  +T  + ++WN++I     
Sbjct: 346 QLHARAEKSGLK-GNVMVGNALIIMYFKSG-DILAAQSVFSNMTCCNIITWNAIITGHSH 403

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWN 216
            G    AL  F+ M+ +   P+  T + V LAC++L   D G      +      V    
Sbjct: 404 HGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLE 463

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSL---SQNDKFLEAVMFLR 272
            +    ++ + ++ GR+D+A+   +S + + D+VSW T++++       DK  +   +L 
Sbjct: 464 HY--TCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLL 521

Query: 273 QMALRGI 279
           Q+  R +
Sbjct: 522 QLEPRDV 528


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/555 (38%), Positives = 323/555 (58%), Gaps = 25/555 (4%)

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MYC C  V   R VFD +  + +  W  +I GY QN    EA+ L   M   A   PN  
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR-ARFRPNGF 59

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           T +S++ A          E +H  A+K     D YV +AL+DMY+R  +++++  +FD +
Sbjct: 60  TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119

Query: 448 EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             ++ VSWN +I G+         LM   EMQ       RN                 T 
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQ-------RNGF----------GATHFTY 162

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
            ++      + AL +G+ +HA+ I++       VG+ ++ MYAK G +  AR+VFD M  
Sbjct: 163 SSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDK 222

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           R+++TWN ++ A   +G G+E +   + +     R   ++ N++TF+++  ACSH G+V 
Sbjct: 223 RDLVTWNTMLTALAQYGLGKEAVAHFEEI-----RKCGIQLNQITFLSVLTACSHGGLVK 277

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG 687
           EG   F  MKD Y ++P  DHY   VDLLGRAG +++A   +  MP E   A  W +LLG
Sbjct: 278 EGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME-PTAAVWGALLG 335

Query: 688 ACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKE 747
           ACR+H+N ++G+ AA ++F L+PD     VLL NIY+S   W+ A  VRK MK  GV+KE
Sbjct: 336 ACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKE 395

Query: 748 PGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEK 807
           P CSW++  + +H F+A D +H +S  ++   E ++ R++K GYVP+T+ VL ++NE+E+
Sbjct: 396 PACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQER 455

Query: 808 ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRR 867
           ET L  HSEK+A+AF ++N P G +IR+ KN+R+C DCH A K++SK+  REI++RD  R
Sbjct: 456 ETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNR 515

Query: 868 FHHFKNGTCSCGDYW 882
           FHHF  G+CSCGDYW
Sbjct: 516 FHHFSEGSCSCGDYW 530



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 165/359 (45%), Gaps = 20/359 (5%)

Query: 226 MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVS 285
           MY K G V DA+ +F     RD+VSW  +++  +QN    EA+  L  M     +P+G +
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
             S+L A         G+++HA A++ +   ++ +VGSAL+DMY  C +++    VFD +
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYN-WDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             K    WNA+I G+ +    E  LM F +M+   G      T SS+  A  R  A    
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQR-NGFGATHFTYSSMFSAFARIGALEQG 178

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
             +H H IK G     +V N ++ MY++ G +  ++ +FD M+ RD V+WNTM+T     
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G   +A+    E++    + N+                 IT ++VL  C     + +GK 
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQ-----------------ITFLSVLTACSHGGLVKEGKH 281

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
                    +  ++    + VD+  + G L  A      MP+      W  ++ A  MH
Sbjct: 282 YFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 8/271 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++    EAI    +M R+  +P+ F F ++LKA       S+G+Q+HA  
Sbjct: 25  SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALA 84

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VKY +    V V + L++MY +C   M     VFDR+  K++VSWN++IA   R    + 
Sbjct: 85  VKYNWD-EDVYVGSALLDMYARC-EQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 142

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
            L  F  M  +    + FT  S+    S  +R   L  GR VH + ++ G+    F+ N 
Sbjct: 143 TLMKFAEMQRNGFGATHFTYSSM---FSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 199

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           ++ MYAK G + DA+ +F   + RDLV+WNT++++L+Q     EAV    ++   GI+ +
Sbjct: 200 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 259

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRND 313
            ++  SVL ACSH  ++  GK  H + +  D
Sbjct: 260 QITFLSVLTACSHGGLVKEGK--HYFDMMKD 288



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 25/361 (6%)

Query: 122 MYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSF 181
           MY KCG+ + D   VFD++  +D VSW  +IA   +      A+     ML +   P+ F
Sbjct: 1   MYCKCGA-VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGF 59

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW--NTFIMNALMAMYAKLGRVDDAKTL 239
           T  S+  A        G  +G Q+H  +++   W  + ++ +AL+ MYA+  ++D A  +
Sbjct: 60  TFTSLLKATGACG---GCSIGEQMHALAVKY-NWDEDVYVGSALLDMYARCEQMDMAIMV 115

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F     ++ VSWN +++  ++       +M   +M   G      + +S+  A + +  L
Sbjct: 116 FDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGAL 175

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
           + G+ +HA+ +++   +  +FVG+ ++ MY     +   R+VFD +  + +  WN M+T 
Sbjct: 176 EQGRWVHAHLIKSGQKL-TAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 234

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
             Q    +EA+  F ++ +  G+  N  T  SV+ AC  S     KEG H       + +
Sbjct: 235 LAQYGLGKEAVAHFEEIRK-CGIQLNQITFLSVLTAC--SHGGLVKEGKH----YFDMMK 287

Query: 420 DRYVQN------ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDAL 472
           D  VQ       + +D+  R G ++ +      M +  T + W  ++     C  H +A 
Sbjct: 288 DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA---CRMHKNAK 344

Query: 473 M 473
           M
Sbjct: 345 M 345


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/753 (34%), Positives = 407/753 (54%), Gaps = 35/753 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   +   A+     EAI  +  M ++ I+       +VL A+A +  L  G  +HA  
Sbjct: 294  AWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEA 353

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            +K G   S+V V ++LV+MY KCG  M    KVFD + E++ V WN+M+    + G  + 
Sbjct: 354  LKQGLH-SNVYVGSSLVSMYAKCGK-MEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANE 411

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             +E F  M      P  FT  S+  AC+ L   D   LG Q+H   ++     N F+ NA
Sbjct: 412  VMELFFNMKSCGFYPDDFTYSSILSACACLKYLD---LGHQLHSVIIKNKFASNLFVGNA 468

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            L+ MYAK G ++DA+  F+   +RD VSWN I+    Q +  +EA    R+M L GI PD
Sbjct: 469  LVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPD 528

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             VS+AS+L AC+ +  L+ GK++H  +++        + GS+L+DMY  C  ++   ++ 
Sbjct: 529  EVSLASILSACASVRGLEQGKQVHCLSVKTGQET-KLYSGSSLIDMYAKCGAIDSAHKIL 587

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              + ++ +   NA+I GY Q    E+A+ LF  M  V G+     T +S++ AC   +  
Sbjct: 588  ACMPERSVVSMNALIAGYAQINL-EQAVNLFRDML-VEGINSTEITFASLLDACHEQQKL 645

Query: 403  PDKEGIHGHAIKLGLG-RDRYVQNALMDMYSRMGRIEISKTIFDDME-VRDTVSWNTMIT 460
                 IH   +K+GL   D ++  +L+ MY    R   +  +F +    +  V W  MI+
Sbjct: 646  NLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMIS 705

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            G +       AL L +EM++        NV           P+  T ++ L  C  +S++
Sbjct: 706  GLSQNDCSVVALQLYKEMRSC-------NVL----------PDQATFVSALRACAVVSSI 748

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMA 579
              G E H+        +D +  SALVDMYAKCG +  + +VF  M   ++VI+WN +I+ 
Sbjct: 749  KDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVG 808

Query: 580  YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
            +  +G  ++ L +   M     +   V P++VTF+ +  ACSHSG VSEG  +F  M + 
Sbjct: 809  FAKNGYAEDALRVFDEM-----KQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNL 863

Query: 640  YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            YG++P  DH AC+VDLLGR G +++A + IN +  E D A  W+++LGACRIH +   G+
Sbjct: 864  YGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPD-AKVWATMLGACRIHGDDIRGQ 922

Query: 700  IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
             AA+ L  LEP  +S YVLLSNIY+++  WD+   +R++M+E GV+K PGCSWI  G E 
Sbjct: 923  QAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQET 982

Query: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
            + F+AGD SH  + ++   L++L+  MR+  YV
Sbjct: 983  NMFVAGDKSHHSASEIDAILKDLTPLMRENDYV 1015



 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 178/574 (31%), Positives = 284/574 (49%), Gaps = 65/574 (11%)

Query: 48  SLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           S+ S      F   ++ Y  +   S + P+ F F  VL + A ++ +  G+Q+H +VVK 
Sbjct: 130 SILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKM 189

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           G+  S       L+ MY KC   + D   +FD   E D+VSW SMI    + G  + A++
Sbjct: 190 GFE-SISYCEGALIGMYAKCNF-LTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVK 247

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
            F+ M     EP     V+V                                 +NA    
Sbjct: 248 VFQEMEKVGQEPDQVAFVTV---------------------------------INA---- 270

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
           Y  LGR+D+A  LF    +R++V+WN ++S  ++    +EA+ F + M   GIK    ++
Sbjct: 271 YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
            SVL A + L  LD G  +HA AL+   L  N +VGS+LV MY  C ++E  ++VFD ++
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQG-LHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN 389

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           ++ + LWNAM+ GY QN Y  E + LF  M+   G +P+  T SS++ AC   +      
Sbjct: 390 EQNVVLWNAMLGGYVQNGYANEVMELFFNMKS-CGFYPDDFTYSSILSACACLKYLDLGH 448

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   IK     + +V NAL+DMY++ G +E ++  F+ +  RD VSWN +I GY    
Sbjct: 449 QLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEE 508

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
              +A  L R M                  +L   P+ ++L ++L  C ++  L +GK++
Sbjct: 509 DEVEAFHLFRRM-----------------NLLGILPDEVSLASILSACASVRGLEQGKQV 551

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H  +++    T +  GS+L+DMYAKCG ++ A ++   MP R+V++ N +I  Y      
Sbjct: 552 HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE 611

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           Q V  L ++M+ EG     +   E+TF +L  AC
Sbjct: 612 QAV-NLFRDMLVEG-----INSTEITFASLLDAC 639



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 158/578 (27%), Positives = 286/578 (49%), Gaps = 66/578 (11%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           K IHA  +K G+  S   + N +V++Y KC +D+    + F ++ +KD ++WNS+++   
Sbjct: 79  KIIHAQSLKLGF-WSKGVLGNVIVDLYAKC-ADVDYAERAFKQLEDKDILAWNSILSMHS 136

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           + G   L ++ F ++  S V P+ FT    A+  S+ +R + ++ GRQVH N +++G E 
Sbjct: 137 KQGFPHLVVKYFGLLWNSGVWPNEFTF---AIVLSSCARLEMVKCGRQVHCNVVKMGFES 193

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            ++   AL+ MYAK   + DA+++F    + D VSW +++    +     EAV   ++M 
Sbjct: 194 ISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEME 253

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
             G +PD V+  +V+ A   L  LD   ++                              
Sbjct: 254 KVGQEPDQVAFVTVINAYVDLGRLDNASDL------------------------------ 283

Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
                 F  + ++ +  WN MI+G+ +  Y  EA+  F  M + AG+    +T+ SV+ A
Sbjct: 284 ------FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRK-AGIKSTRSTLGSVLSA 336

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
                A      +H  A+K GL  + YV ++L+ MY++ G++E +K +FD +  ++ V W
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
           N M+ GY   G   + + L   M++          Y          P+  T  ++L  C 
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSC-------GFY----------PDDFTYSSILSACA 439

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
            L  L  G ++H+  I+N  A+++ VG+ALVDMYAK G L  AR+ F+L+  R+ ++WNV
Sbjct: 440 CLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNV 499

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
           II+ Y    +  E   L + M   G     + P+EV+  ++ +AC+    + +G  + + 
Sbjct: 500 IIVGYVQEEDEVEAFHLFRRMNLLG-----ILPDEVSLASILSACASVRGLEQGKQV-HC 553

Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           +    G E      + ++D+  + G ++ A++++  MP
Sbjct: 554 LSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 169/388 (43%), Gaps = 62/388 (15%)

Query: 301 TGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY 360
           T K IHA +L+         +G+ +VD+Y  C +V+   R F  + DK I  WN++++ +
Sbjct: 77  TNKIIHAQSLKLGFW-SKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMH 135

Query: 361 GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD 420
            +  +    +  F  +   +G+WPN  T + V+ +C R E       +H + +K+G    
Sbjct: 136 SKQGFPHLVVKYFGLLWN-SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESI 194

Query: 421 RYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN 480
            Y + AL+ MY++   +  +++IFD     D VSW +MI GY   G   +A+ + +EM+ 
Sbjct: 195 SYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEK 254

Query: 481 MEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVV 540
           + +E                 P+ +  +TV                              
Sbjct: 255 VGQE-----------------PDQVAFVTV------------------------------ 267

Query: 541 VGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEG 600
                ++ Y   G L+ A  +F  MP RNV+ WN++I  +   G G E +E  +NM    
Sbjct: 268 -----INAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNM---- 318

Query: 601 SRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAG 660
            R   +K    T  ++ +A +    +  G+ L +      G+  +    + +V +  + G
Sbjct: 319 -RKAGIKSTRSTLGSVLSAIASLAALDFGL-LVHAEALKQGLHSNVYVGSSLVSMYAKCG 376

Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           K+E A ++ + +  +      W+++LG 
Sbjct: 377 KMEAAKKVFDTLNEQ--NVVLWNAMLGG 402



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K IHA +++    +  V+G+ +VD+YAKC  +++A R F  +  ++++ WN I+  +   
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G    V++    +   G     V PNE TF  + ++C+   MV  G  +   +    G E
Sbjct: 139 GFPHLVVKYFGLLWNSG-----VWPNEFTFAIVLSSCARLEMVKCGRQVHCNVV-KMGFE 192

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLG----------ACRIHQ 693
                   ++ +  +   + DA  + +    E DK  +W+S++G          A ++ Q
Sbjct: 193 SISYCEGALIGMYAKCNFLTDARSIFD-GAVELDKV-SWTSMIGGYIKVGLPEEAVKVFQ 250

Query: 694 NVE-IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV 744
            +E +G+         EPD  + +V + N Y      D A D+  +M    V
Sbjct: 251 EMEKVGQ---------EPDQVA-FVTVINAYVDLGRLDNASDLFSRMPNRNV 292


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/732 (34%), Positives = 377/732 (51%), Gaps = 74/732 (10%)

Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLR---VGEWNTFIMNALMAMYAKLGRVDDAKT 238
           T V+ +   S LSR   +   R+   +SL+   +G WN+ +     + Y   G   +A+ 
Sbjct: 16  TGVNCSFEISRLSRIGKINEARKFF-DSLQFKAIGSWNSIV-----SGYFSNGLPKEARQ 69

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR---------------GIKPDG 283
           LF    +R++VSWN +VS   +N   +EA      M  R               G+  + 
Sbjct: 70  LFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA 129

Query: 284 VSIASVLPACSHLE-------MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
            S+   +P  + +        ++D G+   A  L + + + +    + ++   C    V+
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189

Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             R +FD + ++ +  W  MITGY QN   + A  LF  M E   +   +  +   +   
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249

Query: 397 VRS-----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           +       E  P K  I  +A+ +G G               +G I  ++ +FD ME RD
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVGFGE--------------VGEISKARRVFDLMEDRD 295

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
             +W  MI  Y   G   +AL L  +MQ                     +P+  +L+++L
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQG-----------------VRPSFPSLISIL 338

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L++L  G+++HA+ +R     DV V S L+ MY KCG L  A+ VFD    +++I
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
            WN II  Y  HG G+E L++   M + G+      PN+VT IA+  ACS++G + EG++
Sbjct: 399 MWNSIISGYASHGLGEEALKIFHEMPSSGT-----MPNKVTLIAILTACSYAGKLEEGLE 453

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
           +F  M+  + + P+ +HY+C VD+LGRAG+V+ A +LI  M  + D A  W +LLGAC+ 
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD-ATVWGALLGACKT 512

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H  +++ E+AA+ LF  EPD A  YVLLS+I +S   W     VRK M+   V K PGCS
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572

Query: 752 WIEFGDEIHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           WIE G ++H F  G   +H +   +   LE     +R+ GY PD S VLH+V+EEEK   
Sbjct: 573 WIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDS 632

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           L  HSE+LA+A+G+L  P G  IRV KNLRVC DCH A K ISK+  REIILRD  RFHH
Sbjct: 633 LSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHH 692

Query: 871 FKNGTCSCGDYW 882
           F NG CSC DYW
Sbjct: 693 FNNGECSCRDYW 704



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 204/497 (41%), Gaps = 65/497 (13%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N++V+ Y   G    +  ++FD ++E++ VSWN +++   +      A   F +M   NV
Sbjct: 52  NSIVSGYFSNGLPK-EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV 110

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVD 234
              S+T +           +  ++ G      SL  R+ E N      +       GR+D
Sbjct: 111 --VSWTAMV----------KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRID 158

Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACS 294
            A+ L+     +D+V+   ++  L +  +  EA +   +M  R +    V+  +++    
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYR 214

Query: 295 HLEMLDTGKEIH----------------AYALRNDILIDNSFVG----------SALVDM 328
               +D  +++                  Y L   I     F            +A++  
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           +    E+   RRVFD + D+  A W  MI  Y +  ++ EAL LF +M++  G+ P+  +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK-QGVRPSFPS 333

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           + S++  C    +      +H H ++     D YV + LM MY + G +  +K +FD   
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
            +D + WN++I+GY   G   +AL +  EM +                     PN +TL+
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG-----------------TMPNKVTLI 436

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPV 567
            +L  C     L +G EI          T  V   S  VDM  + G ++ A  + + M +
Sbjct: 437 AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496

Query: 568 R-NVITWNVIIMAYGMH 583
           + +   W  ++ A   H
Sbjct: 497 KPDATVWGALLGACKTH 513



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 5/197 (2%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           +  V   N ++  +G+ G ++    +VFD + ++D  +W  MI    R G    AL+ F 
Sbjct: 262 MKPVIACNAMIVGFGEVG-EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M    V PS  +L+S+   C+ L+    L+ GRQVH + +R   + + ++ + LM MY 
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLA---SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K G +  AK +F  F  +D++ WN+I+S  + +    EA+    +M   G  P+ V++ +
Sbjct: 378 KCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437

Query: 289 VLPACSHLEMLDTGKEI 305
           +L ACS+   L+ G EI
Sbjct: 438 ILTACSYAGKLEEGLEI 454



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 47/268 (17%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R   +W   +++  R     EA+  + +M +  ++P   +  ++L   A +  L  G+
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HAH+V+  +    V VA+ L+ MY KCG ++     VFDR + KD + WNS+I+    
Sbjct: 352 QVHAHLVRCQFD-DDVYVASVLMTMYVKCG-ELVKAKLVFDRFSSKDIIMWNSIISGYAS 409

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT 217
            G  + AL+ F  M  S   P+  TL+++  ACS                          
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS-------------------------- 443

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLR 272
                    YA  G++++   +F+S E +  V+     ++  V  L +  +  +A+  + 
Sbjct: 444 ---------YA--GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE 492

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLD 300
            M    IKPD     ++L AC     LD
Sbjct: 493 SMT---IKPDATVWGALLGACKTHSRLD 517



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 28/181 (15%)

Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
           R  L +  V  S  +   ++ G +N AR+ FD +  + + +WN I+  Y  +G  +E  +
Sbjct: 10  RTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQ 69

Query: 592 L-------------------LKN-MVAEGSRGGEVKP--NEVTFIALFAACSHSGMVSEG 629
           L                   +KN M+ E     E+ P  N V++ A+       GMV E 
Sbjct: 70  LFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA 129

Query: 630 MDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC 689
             LF++M      E +   +  +   L   G+++ A +L +MMP + D   + + + G C
Sbjct: 130 ESLFWRMP-----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-DVVASTNMIGGLC 183

Query: 690 R 690
           R
Sbjct: 184 R 184


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/701 (35%), Positives = 378/701 (53%), Gaps = 30/701 (4%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSL- 258
           +Q+H + LR   + + +  + L+  YA      +  AK +F      +L  WNT++    
Sbjct: 89  KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S +D     ++FL  +      P+  +   +  A S L++L  G  +H   ++  +  D 
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSD- 207

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            F+ ++L++ Y +    +   RVF  +  K +  WNAMI  +      ++AL+LF +ME 
Sbjct: 208 LFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME- 266

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
           +  + PN  TM SV+ AC +         I  +    G      + NA++DMY + G I 
Sbjct: 267 MKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIN 326

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM-------------EEEK 485
            +K +F+ M  +D VSW TM+ G+   G + +A  +   M +              +  K
Sbjct: 327 DAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGK 386

Query: 486 NRNNVYDLDETVLR--PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS 543
            R  +    E  L    KP+ +TL+  L     L A+  G  IH Y  ++ +  +  + +
Sbjct: 387 PRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLAT 446

Query: 544 ALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRG 603
           +L+DMYAKCG LN A  VF  +  ++V  W+ +I A  M+G+G+  L+L  +M+      
Sbjct: 447 SLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLE----- 501

Query: 604 GEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVE 663
             +KPN VTF  +  AC+H+G+V+EG  LF +M+  YGI P   HY CVVD+ GRAG +E
Sbjct: 502 AYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLE 561

Query: 664 DAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIY 723
            A   I  MP     A  W +LLGAC  H NVE+ E+A QNL  LEP     +VLLSNIY
Sbjct: 562 KAASFIEKMPIP-PTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIY 620

Query: 724 SSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLS 783
           + A  W+K  ++RK M++  V+KEP CS I+    +H+FL GD SH  S++++  L+ +S
Sbjct: 621 AKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEIS 680

Query: 784 ERMRKEGYVPDTSCVLHNVNEEEK--ETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
           E+ +  GY PD S +L  ++EE+   E  L  HSEKLAIAFG+++T     IR+ KN+R+
Sbjct: 681 EKFKPIGYKPDMSNLLQ-LSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRI 739

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH   K +S++  R+I+LRD  RFHHF+ G CSC DYW
Sbjct: 740 CGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 231/493 (46%), Gaps = 63/493 (12%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQ-PDNFAFPAVLKAVAGIQD 92
           +P     C   W   +R  A S+   ++ L ++ M  S  + P+ F FP + KA + ++ 
Sbjct: 132 IPQPNLYC---WNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKV 188

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSM 151
           L LG  +H  V+K     S + + N+L+N YG  G+ D+   ++VF  +  KD VSWN+M
Sbjct: 189 LHLGSVLHGMVIKASLS-SDLFILNSLINFYGSSGAPDL--AHRVFTNMPGKDVVSWNAM 245

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I      G  D AL  F+ M   +V+P+  T+VSV  AC   +++  L  GR +      
Sbjct: 246 INAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSAC---AKKIDLEFGRWICSYIEN 302

Query: 212 VGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVS-------------------- 250
            G     I+ NA++ MY K G ++DAK LF    ++D+VS                    
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCI 362

Query: 251 -----------WNTIVSSLSQNDKFLEAVMFLRQMAL-RGIKPDGVSIASVLPACSHLEM 298
                      WN ++S+  QN K   A+    +M L +  KPD V++   L A + L  
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGA 422

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           +D G  IH Y  ++DI + N  + ++L+DMY  C  +     VF  +  K + +W+AMI 
Sbjct: 423 IDFGHWIHVYIKKHDINL-NCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIG 481

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGH 411
                   + AL LF  M E A + PNA T ++++ AC  +       + F   E ++G 
Sbjct: 482 ALAMYGQGKAALDLFSSMLE-AYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGI 540

Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
             ++      YV   ++D++ R G +E + +  + M +  T + W  ++     C +HG+
Sbjct: 541 VPQI----QHYV--CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGA---CSRHGN 591

Query: 471 ALMLLREMQNMEE 483
             +     QN+ E
Sbjct: 592 VELAELAYQNLLE 604



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 19/201 (9%)

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA--KC 552
           E V   K N +    +L      +   + K+IHA+ +R     D    S L+  YA   C
Sbjct: 60  EAVKGEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSC 119

Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
            CL +A+ VF+ +P  N+  WN +I  Y    +  +   +  +M+   S      PN+ T
Sbjct: 120 SCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEF----PNKFT 175

Query: 613 FIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           F  LF A S     H G V  GM +   +  D  I  S      +++  G +G  + A++
Sbjct: 176 FPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNS------LINFYGSSGAPDLAHR 229

Query: 668 LINMMPPEFDKAGAWSSLLGA 688
           +   MP +     +W++++ A
Sbjct: 230 VFTNMPGK--DVVSWNAMINA 248


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 344/609 (56%), Gaps = 24/609 (3%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L AC+  +    GK++H + ++  I    S + + L++MY  C  ++    +F+ +  + 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKS-LSNNLINMYGKCGLIQDALNLFNQLPHRD 68

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
              W +++T   Q       L +F  M +  GL P+    + +V AC    A    + +H
Sbjct: 69  PISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVH 128

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHG 469
              I   +  D  V+++L+DMY++ G  +I + +FD +  ++++SW  MI+GY   G+  
Sbjct: 129 ATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKL 188

Query: 470 DALMLLREM------------QNMEEEKNRNNVYDLDETVLRPKPNSIT----LMTVLPG 513
           DA+ L ++M              + +  N  + + L    +R K   I     L +++  
Sbjct: 189 DAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFME-MRSKGIDIVDPFILSSIIGA 247

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
              L+ L  GK+IH   I     + + V +ALVDMYAKC  +  A+++F  M  R++++W
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
             II+    HG  +E L L   M++ G     +KPNEVTF+ L  ACSH G+VS+G   F
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTG-----LKPNEVTFVGLIYACSHVGLVSKGRYFF 362

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             M  DYGI PS  HY C++DLL R+G +E+A  LI  MP + D+A  W++LL AC  H+
Sbjct: 363 NSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEA-TWAALLSACNHHR 421

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N  IG   A +L  L+P+  S Y+LLSNIY+SA +W+    VR+ M  M V+KEPG S I
Sbjct: 422 NTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCI 481

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
             G E   FLAG+ SH   E++ G LE L   M+K GY+PDTS VLH++ ++EKE  L  
Sbjct: 482 VLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFW 541

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSE+LA+A+G+L   PG  + + KNLRVC DCH   KFIS I  REI++RD  R+HHFK+
Sbjct: 542 HSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKD 601

Query: 874 GTCSCGDYW 882
           G CSC ++W
Sbjct: 602 GKCSCNNFW 610



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 236/533 (44%), Gaps = 74/533 (13%)

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
           +R     +G+++H + ++ G +    + N L+ MY K G + DA  LF     RD +SW 
Sbjct: 14  ARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWA 73

Query: 253 TIVSSLSQ-NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           +I+++ +Q N   L   MF       G++PD    A ++ AC+ L  +  GK++HA  + 
Sbjct: 74  SILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIV 133

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
           + +  D+  V S+LVDMY  C   + GR VFD IS K    W AMI+GY Q+    +A+ 
Sbjct: 134 SPV-SDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQ 192

Query: 372 LFIKMEE---------VAGL-----WPNAT-----------------TMSSVVPACVRSE 400
           LF KM           ++GL     W ++                   +SS++ A     
Sbjct: 193 LFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLA 252

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
                + IH   I LG     +V NAL+DMY++   +  +K IF  M  RD VSW ++I 
Sbjct: 253 VLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIV 312

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
           G    G   +AL L   M +               T L  KPN +T + ++  C  +  +
Sbjct: 313 GTAQHGLAEEALSLYNRMLS---------------TGL--KPNEVTFVGLIYACSHVGLV 355

Query: 521 AKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIM 578
           +KG+      I++  +   +   + L+D+ ++ G L  A  +   MP + +  TW  ++ 
Sbjct: 356 SKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
           A   H      + +  ++++       +KP + +   L +    S  + E +    ++  
Sbjct: 416 ACNHHRNTLIGIRVADHLLS-------LKPEDPSTYILLSNIYASAAMWESVSKVRRLMA 468

Query: 639 DYGIEPSPDHYACVVDLLGRAGKV-----------EDAYQLINMMPPEFDKAG 680
              ++  P  Y+C+V  LG+  +V           E+ + L+  +  E  K G
Sbjct: 469 AMEVKKEPG-YSCIV--LGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRG 518



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 54/433 (12%)

Query: 84  LKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK 143
           L+A A  Q   +GK++H H++K G      +++N L+NMYGKCG  + D   +F+++  +
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGID-QCKSLSNNLINMYGKCGL-IQDALNLFNQLPHR 67

Query: 144 DQVSWNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLG 202
           D +SW S++    +     L L  F  M   + ++P  +    +  AC+ L     ++ G
Sbjct: 68  DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILG---AMKQG 124

Query: 203 RQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
           +QVH   +   V + +  + ++L+ MYAK G  D  + +F S   ++ +SW  ++S  +Q
Sbjct: 125 KQVHATFIVSPVSD-DDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183

Query: 261 NDKFLEAVMFLRQMALRGI--------------------------KPDGVSI------AS 288
           + + L+A+   ++M ++ +                          +  G+ I      +S
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSS 243

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILI---DNSFVGSALVDMYCNCREVECGRRVFDFI 345
           ++ A ++L +L  GK+IH       IL+    + FV +ALVDMY  C +V   +++F  +
Sbjct: 244 IIGASANLAVLGLGKQIHCLV----ILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRM 299

Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
             + I  W ++I G  Q+   EEAL L+ +M    GL PN  T   ++ AC         
Sbjct: 300 VQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLS-TGLKPNEVTFVGLIYACSHVGLVSKG 358

Query: 406 EGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYT 463
                  IK  G+         L+D+ SR G +E ++ +   M  + D  +W  +++   
Sbjct: 359 RYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA-- 416

Query: 464 ICGQHGDALMLLR 476
            C  H + L+ +R
Sbjct: 417 -CNHHRNTLIGIR 428



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 146/297 (49%), Gaps = 45/297 (15%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
           SW   L +  ++N     +  +  M + D +QPD++ F  ++KA A +  +  GKQ+HA 
Sbjct: 71  SWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHAT 130

Query: 103 VVKYGYGLSSVTVANTLVNMYGKCG-SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
            +        V V ++LV+MY KCG  D+  V  VFD I+ K+ +SW +MI+   + G+ 
Sbjct: 131 FIVSPVSDDDV-VKSSLVDMYAKCGLPDIGRV--VFDSISSKNSISWTAMISGYAQSGRK 187

Query: 162 DLALEAFRMMLYSN----------------------------------VEPSSFTLVSVA 187
             A++ F+ M   N                                  V+P  F L S+ 
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP--FILSSII 245

Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
            A +NL+    L LG+Q+H   + +G E + F+ NAL+ MYAK   V  AK +F     R
Sbjct: 246 GASANLAV---LGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302

Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           D+VSW +I+   +Q+    EA+    +M   G+KP+ V+   ++ ACSH+ ++  G+
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGR 359



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 4/123 (3%)

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP 566
           L+  L  C    +   GK++H + I+  +     + + L++MY KCG +  A  +F+ +P
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            R+ I+W  I+ A          L +   M  +      ++P+   F  L  AC+  G +
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDG----LQPDHYVFACLVKACAILGAM 121

Query: 627 SEG 629
            +G
Sbjct: 122 KQG 124


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 429/760 (56%), Gaps = 36/760 (4%)

Query: 44   SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
            +W   + S ++S    E    Y +M +  + P    F ++L A A +     G+QIHA  
Sbjct: 291  AWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATA 350

Query: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            VK+G   ++V V ++L+N+Y K G  + D  KVFD  TEK+ V WN+++    +    + 
Sbjct: 351  VKHGLD-ANVFVGSSLINLYVKHGC-ISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEE 408

Query: 164  ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
             ++ F+ M  +++E   FT VSV  AC NL   D   LGRQVH  +++ G + + F+ NA
Sbjct: 409  TIQMFQYMRRADLEADDFTFVSVLGACINLYSLD---LGRQVHCITIKNGMDADLFVANA 465

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            ++ MY+KLG +D AK LF     +D VSWN ++  L+ N++  EA+  L++M   GI  D
Sbjct: 466  MLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALD 525

Query: 283  GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             VS A+ + ACS++  ++TGK+IH+ +++ ++   N  VGS+L+D+Y    +VE  R+V 
Sbjct: 526  EVSFATAINACSNIWAIETGKQIHSASIKYNV-CSNHAVGSSLIDLYSKFGDVESSRKVL 584

Query: 343  DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
              +    I   NA+ITG  QN  ++EA+ LF ++ +  G  P+  T +S++  C R  + 
Sbjct: 585  AHVDASSIVPINALITGLVQNNREDEAIELFQQVLK-DGFKPSNFTFTSILSGCTRPVSS 643

Query: 403  PDKEGIHGHAIKLG-LGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTVSWNTMIT 460
               + +H + +K   L +D  +  +L+ +Y +   +E +  + +++ + ++ V W   I+
Sbjct: 644  VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
            GY   G    +L++   M++          YD+       + +  T  +VL  C  ++AL
Sbjct: 704  GYAQNGYSVQSLVMFWRMRS----------YDV-------RSDEATFTSVLKACSEMAAL 746

Query: 521  AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMA 579
              GKEIH   +++   +     SAL+DMY+KCG +  +  +F +L   +N++ WN +I+ 
Sbjct: 747  TDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVG 806

Query: 580  YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
            +  +G   E L L + M     +  ++KP++VT + +  ACSH+G++SEG+  F  M   
Sbjct: 807  FAKNGYANEALLLFQKM-----QESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQV 861

Query: 640  YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699
            YGI P  DHYAC++DLLGR G ++ A ++I+ +P   D    W++ L AC++H++ E G+
Sbjct: 862  YGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGV-IWATYLAACQMHKDEERGK 920

Query: 700  IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759
            +AA+ L  +EP  +S YV LS+++++A  W +A   R+ M+E GV K PGCSWI  G++ 
Sbjct: 921  VAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQ 980

Query: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
              F+  D  H  +  ++  L++L+  M K+G + +  C+L
Sbjct: 981  SVFVVQDTHHPDALSIYKMLDDLTGMMNKDGRIKE--CLL 1018



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 170/575 (29%), Positives = 287/575 (49%), Gaps = 66/575 (11%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDI--QPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKY 106
           L   ARS   R+ +L   +  R  I   PD F    VL A + +  L  G+Q+H  V+K 
Sbjct: 128 LSCHARSGSPRD-VLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 107 GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALE 166
           G+  SSV     LV+MY KCG ++ D  ++FD I   D + W SMIA   R G++  AL 
Sbjct: 187 GF-CSSVFCQAGLVDMYAKCG-EVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALA 244

Query: 167 AFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAM 226
            F  M      P   T V++                                     ++ 
Sbjct: 245 LFSRMEKMGSVPDQVTCVTI-------------------------------------IST 267

Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
            A +GR+ DA+TL K       V+WN +++S SQ+    E     + M  +G+ P   + 
Sbjct: 268 LASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTF 327

Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
           AS+L A +++   D G++IHA A+++  L  N FVGS+L+++Y     +   ++VFDF +
Sbjct: 328 ASILSAAANMTAFDEGRQIHATAVKHG-LDANVFVGSSLINLYVKHGCISDAKKVFDFST 386

Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
           +K I +WNA++ G+ QNE  EE + +F  M   A L  +  T  SV+ AC+   +     
Sbjct: 387 EKNIVMWNAILYGFVQNELQEETIQMFQYMRR-ADLEADDFTFVSVLGACINLYSLDLGR 445

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +H   IK G+  D +V NA++DMYS++G I+++K +F  + V+D+VSWN +I G     
Sbjct: 446 QVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNE 505

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
           + G+A+ +L+ M+             LDE         ++  T +  C  + A+  GK+I
Sbjct: 506 EEGEAINMLKRMKFYG--------IALDE---------VSFATAINACSNIWAIETGKQI 548

Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
           H+ +I+  + ++  VGS+L+D+Y+K G +  +R+V   +   +++  N +I     +   
Sbjct: 549 HSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNRE 608

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
            E +EL + ++ +G      KP+  TF ++ + C+
Sbjct: 609 DEAIELFQQVLKDG-----FKPSNFTFTSILSGCT 638



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 260/575 (45%), Gaps = 69/575 (12%)

Query: 99  IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC-- 156
           +HA +++ G  L    + + LV++YG+ G   +  ++     T     S  +     C  
Sbjct: 75  LHARILRLGLPLRG-RLGDALVDLYGRSGRVGY-AWRALACCTGAPASSAAASSVLSCHA 132

Query: 157 RFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW 215
           R G     L+AF+ +  S    P  F +  V  ACS L     L  GRQVH + L+ G  
Sbjct: 133 RSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLG---ALEHGRQVHCDVLKSGFC 189

Query: 216 NT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++ F    L+ MYAK G VDDA+ +F      D + W ++++   +  ++ +A+    +M
Sbjct: 190 SSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRM 249

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
              G  PD V+  +++   + +  L                      G A          
Sbjct: 250 EKMGSVPDQVTCVTIISTLASMGRL----------------------GDA---------- 277

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               R +   I       WNA+I  Y Q+  D E   L+  M++  GL P  +T +S++ 
Sbjct: 278 ----RTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKK-QGLMPTRSTFASILS 332

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
           A     AF +   IH  A+K GL  + +V ++L+++Y + G I  +K +FD    ++ V 
Sbjct: 333 AAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVM 392

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           WN ++ G+       + + + + M+  + E                  +  T ++VL  C
Sbjct: 393 WNAILYGFVQNELQEETIQMFQYMRRADLE-----------------ADDFTFVSVLGAC 435

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
             L +L  G+++H   I+N +  D+ V +A++DMY+K G ++ A+ +F L+PV++ ++WN
Sbjct: 436 INLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWN 495

Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            +I+    + E  E + +LK M   G     +  +EV+F     ACS+   +  G  + +
Sbjct: 496 ALIVGLAHNEEEGEAINMLKRMKFYG-----IALDEVSFATAINACSNIWAIETGKQI-H 549

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
                Y +  +    + ++DL  + G VE + +++
Sbjct: 550 SASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 202/422 (47%), Gaps = 64/422 (15%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G  PD   IA VL ACS L  L+ G+++H   L++     + F  + LVDMY  C EV+ 
Sbjct: 152 GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSG-FCSSVFCQAGLVDMYAKCGEVDD 210

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            RR+FD I+      W +MI GY +    ++AL LF +ME++ G  P+  T       CV
Sbjct: 211 ARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKM-GSVPDQVT-------CV 262

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                                        ++   + MGR+  ++T+   + +  TV+WN 
Sbjct: 263 ----------------------------TIISTLASMGRLGDARTLLKRIRMTSTVAWNA 294

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           +I  Y+  G   +   L ++M+       R+                 T  ++L     +
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRS-----------------TFASILSAAANM 337

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           +A  +G++IHA A+++ L  +V VGS+L+++Y K GC++ A++VFD    +N++ WN I+
Sbjct: 338 TAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAIL 397

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
             +  +   +E +++ + M     R  +++ ++ TF+++  AC +   +  G  + + + 
Sbjct: 398 YGFVQNELQEETIQMFQYM-----RRADLEADDFTFVSVLGACINLYSLDLGRQV-HCIT 451

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
              G++        ++D+  + G ++ A  L +++P +   + +W++L+    +  N E 
Sbjct: 452 IKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK--DSVSWNALI--VGLAHNEEE 507

Query: 698 GE 699
           GE
Sbjct: 508 GE 509



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 151/369 (40%), Gaps = 61/369 (16%)

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK--KIALWNAMITGYGQ 362
           +HA  LR  + +    +G ALVD+Y     V    R     +      A  +++++ + +
Sbjct: 75  LHARILRLGLPLRGR-LGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           +    + L  F ++    G  P+   ++ V+ AC R  A      +H   +K G     +
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVF 193

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
            Q  L+DMY++ G ++ ++ +FD +   DT+ W +MI GY   G++  AL L   M+ M 
Sbjct: 194 CQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMG 253

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                              P+ +T +T++                               
Sbjct: 254 S-----------------VPDQVTCVTII------------------------------- 265

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           S L  M    G L  AR +   + + + + WN +I +Y   G   EV  L K+M  +G  
Sbjct: 266 STLASM----GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQG-- 319

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
              + P   TF ++ +A ++     EG  + +     +G++ +    + +++L  + G +
Sbjct: 320 ---LMPTRSTFASILSAAANMTAFDEGRQI-HATAVKHGLDANVFVGSSLINLYVKHGCI 375

Query: 663 EDAYQLINM 671
            DA ++ + 
Sbjct: 376 SDAKKVFDF 384


>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
          Length = 562

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/585 (37%), Positives = 346/585 (59%), Gaps = 32/585 (5%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR-----RVFDFISDKKIALWNAMI 357
           K+ HA  L+  +  D SF  S LV     C   + G       +F  + +     +N M+
Sbjct: 5   KQSHARILKXGLFXD-SFCASNLV---ATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60

Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
            G+ ++   EEAL+ + +M E  G+ P+  T  +++ AC R  A  +   +H H +KLGL
Sbjct: 61  RGHVKDMNTEEALITYKEMAE-RGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 119

Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
             D +VQN+L+ MY + G I +   +F+ M  R   SW+ +IT +   G   D L LL +
Sbjct: 120 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGD 179

Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
           M N          +  +E++L         ++VL  C  L AL  G+ +H + +RN+   
Sbjct: 180 MSN-------EGYWRAEESIL---------VSVLSACTHLGALDLGRSVHGFLLRNVSGL 223

Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
           +V+V ++L++MY KCG L     +F  M  +N ++++V+I    MHG G+E L +   M+
Sbjct: 224 NVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEML 283

Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
            +G     ++P+++ ++ +  ACSH+G+V EG+  F +MK ++GIEP+  HY C+VDL+G
Sbjct: 284 EQG-----LEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMG 338

Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
           RAGK+++A +LI  MP E +    W SLL A ++H N++ GEIAA+ LF L+   AS YV
Sbjct: 339 RAGKIDEALELIKSMPMEPNDV-LWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYV 397

Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
           +LSN+Y+ AQ W+     R  M   G+ + PG S +E   ++H+F++ D  H QSE ++ 
Sbjct: 398 VLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYE 457

Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
            L  +  +++ EGY PDT+ VL +V+EEEK+  L GHS+KLAIA+ +++T  G+ +R+ +
Sbjct: 458 MLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVR 517

Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           NLR+CNDCH  TK IS I  REI +RD  RFHHFK+G CSC DYW
Sbjct: 518 NLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 562



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 11/258 (4%)

Query: 49  LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
           +R   +     EA+++Y EM    ++PDNF +P +LKA A +  +  G Q+HAH++K G 
Sbjct: 60  MRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 119

Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
             + V V N+L++MYGKCG ++     VF+++ E+   SW+++I      G W   L   
Sbjct: 120 E-NDVFVQNSLISMYGKCG-EIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLL 177

Query: 169 RMML---YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALM 224
             M    Y   E S   LVSV  AC++L     L LGR VHG  LR V   N  +  +L+
Sbjct: 178 GDMSNEGYWRAEES--ILVSVLSACTHLG---ALDLGRSVHGFLLRNVSGLNVIVETSLI 232

Query: 225 AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV 284
            MY K G +     LF+    ++ +S++ ++S L+ +    E +    +M  +G++PD +
Sbjct: 233 EMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDI 292

Query: 285 SIASVLPACSHLEMLDTG 302
               VL ACSH  ++  G
Sbjct: 293 VYVGVLNACSHAGLVQEG 310



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 185/374 (49%), Gaps = 13/374 (3%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ HA ++K G    S   +N +          M     +F ++ E     +N+M+    
Sbjct: 5   KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHV 64

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           +    + AL  ++ M    V+P +FT  ++  AC+ L     +  G QVH + L++G E 
Sbjct: 65  KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLP---AVEEGMQVHAHILKLGLEN 121

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           + F+ N+L++MY K G +     +F+   +R + SW+ ++++ +    + + +  L  M+
Sbjct: 122 DVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMS 181

Query: 276 LRGI-KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
             G  + +   + SVL AC+HL  LD G+ +H + LRN +   N  V ++L++MY  C  
Sbjct: 182 NEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRN-VSGLNVIVETSLIEMYLKCGX 240

Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
           +  G  +F  ++ K    ++ MI+G   + Y  E L +F +M E  GL P+      V+ 
Sbjct: 241 LYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLE-QGLEPDDIVYVGVLN 299

Query: 395 ACVRSEAFPDKEGIHG-HAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR- 450
           AC  S A   +EG+   + +KL  G +  +Q+   ++D+  R G+I+ +  +   M +  
Sbjct: 300 AC--SHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEP 357

Query: 451 DTVSWNTMITGYTI 464
           + V W ++++   +
Sbjct: 358 NDVLWRSLLSASKV 371



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 186/397 (46%), Gaps = 37/397 (9%)

Query: 203 RQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
           +Q H   L+ G + ++F  + L+A  A    G +D A ++F+  ++     +NT++    
Sbjct: 5   KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHV 64

Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDIL 315
           ++    EA++  ++MA RG+KPD  +  ++L AC+ L  ++ G ++HA+ L+    ND+ 
Sbjct: 65  KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 124

Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
           + NS     L+ MY  C E+     VF+ ++++ +A W+A+IT +       + L L   
Sbjct: 125 VQNS-----LISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGD 179

Query: 376 MEEVAGLW-PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
           M    G W    + + SV+ AC    A      +HG  ++   G +  V+ +L++MY + 
Sbjct: 180 MSN-EGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 238

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM--QNMEEEKNRNNVYD 492
           G +     +F  M  ++ +S++ MI+G  + G   + L +  EM  Q +E          
Sbjct: 239 GXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE---------- 288

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAK 551
                    P+ I  + VL  C     + +G +  +   + + +   +     +VD+  +
Sbjct: 289 ---------PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGR 339

Query: 552 CGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
            G ++ A  +   MP+  N + W  ++ A  +H   Q
Sbjct: 340 AGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQ 376


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 259/705 (36%), Positives = 391/705 (55%), Gaps = 37/705 (5%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITE--KDQVSWNSMIA 153
           G+ +HA ++K G  +SS+ V NT +N+Y K  + +     +FD I +  KD VSWNS+I 
Sbjct: 30  GRTLHARILKTG-SISSIYVTNTFLNLYAKT-NHLSHALTLFDSINDNDKDDVSWNSLIN 87

Query: 154 TLCR---FGKWDLALEAFR-MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
              +         A+  FR MM  +NV P++ TL  V  A SNLS    +  G+Q H  +
Sbjct: 88  AFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSD---VVAGKQAHSVA 144

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           ++ G   + ++ ++L+ MY K G V DA+ LF    +R+ VSW T++S  + +D   +AV
Sbjct: 145 VKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAV 204

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
                M       +  ++ SVL A +    + TG+++H+ A++N +L   S V +ALV M
Sbjct: 205 EVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVS-VANALVTM 263

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C  ++   R F+F  DK    W+AM+TGY Q    ++AL LF KM   +G+ P+  T
Sbjct: 264 YAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHS-SGVLPSEFT 322

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           +  V+ AC    A  + + +H  A KLG G   YV +A++DMY++ G +  ++  F+ ++
Sbjct: 323 LVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ 382

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
             D V W ++ITGY   G +   L L  +MQ ME                R  PN +T+ 
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGGLNLYGKMQ-ME----------------RVIPNELTMA 425

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +VL  C +L+AL +GK++HA  I+     +V +GSAL  MY KCG L+    +F  MP R
Sbjct: 426 SVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR 485

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           +VI+WN +I     +G G + LEL + M+ EG     +KP+ VTF+ L +ACSH G+V  
Sbjct: 486 DVISWNAMISGLSQNGHGNKALELFEKMLLEG-----IKPDPVTFVNLLSACSHMGLVDR 540

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G + F  M D++ I P  +HYAC+VD+L RAGK+ +A + I     +      W  LLGA
Sbjct: 541 GWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLC-LWRILLGA 599

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           C+ H+N E+G  A + L  L    +S YVLLS+IY++    +    VR+ MK  GV KEP
Sbjct: 600 CKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEP 659

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
           GCSWIE    +H F+ GD  H Q +++   LE L++ M  EGY P
Sbjct: 660 GCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 198/358 (55%), Gaps = 8/358 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +   A S+   +A+  +  M R +   + FA  +VL A+     +  G+Q+
Sbjct: 182 RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQV 241

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H+  +K G  L+ V+VAN LV MY KCGS + D  + F+   +K+ ++W++M+    + G
Sbjct: 242 HSLAIKNGL-LAIVSVANALVTMYAKCGS-LDDAVRTFEFSGDKNSITWSAMVTGYAQGG 299

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
             D AL+ F  M  S V PS FTLV V  ACS+L     +  G+Q+H  + ++G     +
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLC---AVVEGKQMHSFAFKLGFGLQLY 356

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           +++A++ MYAK G + DA+  F+  +  D+V W +I++   QN  +   +    +M +  
Sbjct: 357 VLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER 416

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           + P+ +++ASVL ACS L  LD GK++HA  ++    ++   +GSAL  MY  C  ++ G
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVP-IGSALSAMYTKCGSLDDG 475

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             +F  +  + +  WNAMI+G  QN +  +AL LF KM  + G+ P+  T  +++ AC
Sbjct: 476 YLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKM-LLEGIKPDPVTFVNLLSAC 532



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 6/262 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+     +A+  + +M  S + P  F    V+ A + +  +  GKQ+H+  
Sbjct: 287 TWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFA 346

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G+GL  + V + +V+MY KCGS + D  K F+ + + D V W S+I    + G ++ 
Sbjct: 347 FKLGFGL-QLYVLSAVVDMYAKCGS-LADARKGFECVQQPDVVLWTSIITGYVQNGDYEG 404

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L  +  M    V P+  T+ SV  ACS+L+  D    G+Q+H   ++ G +    I +A
Sbjct: 405 GLNLYGKMQMERVIPNELTMASVLRACSSLAALDQ---GKQMHARIIKYGFKLEVPIGSA 461

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L AMY K G +DD   +F     RD++SWN ++S LSQN    +A+    +M L GIKPD
Sbjct: 462 LSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPD 521

Query: 283 GVSIASVLPACSHLEMLDTGKE 304
            V+  ++L ACSH+ ++D G E
Sbjct: 522 PVTFVNLLSACSHMGLVDRGWE 543



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +    ++  +   +  Y +M    + P+     +VL+A + +  L  GKQ+HA ++
Sbjct: 389 WTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARII 448

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           KYG+ L  V + + L  MY KCGS + D Y +F R+  +D +SWN+MI+ L + G  + A
Sbjct: 449 KYGFKL-EVPIGSALSAMYTKCGS-LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKA 506

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM---- 220
           LE F  ML   ++P   T V++  ACS++   D     R      +   E+N   M    
Sbjct: 507 LELFEKMLLEGIKPDPVTFVNLLSACSHMGLVD-----RGWEYFKMMFDEFNIAPMVEHY 561

Query: 221 NALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
             ++ + ++ G++++AK   +S   D  L  W  ++ +
Sbjct: 562 ACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGA 599



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 25/230 (10%)

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
           P    L+  L  C     + KG+ +HA  ++    + + V +  +++YAK   L+ A  +
Sbjct: 9   PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 562 FDLM--PVRNVITWNVIIMAYGMHGEGQE---VLELLKNMVAEGSRGGEVKPNEVTFIAL 616
           FD +    ++ ++WN +I A+  +         + L + M+    R   V PN  T   +
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMM----RANNVIPNAHTLAGV 124

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEP--SPDHY--ACVVDLLGRAGKVEDAYQLINMM 672
           F+A S+   V  G     K      ++   S D Y  + ++++  + G V DA +L + M
Sbjct: 125 FSAASNLSDVVAG-----KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRM 179

Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL--EPDVASHYVLLS 720
           P       +W++++     + + +I + A +   L+  E ++ + + L S
Sbjct: 180 PER--NTVSWATMISG---YASSDIADKAVEVFELMRREEEIQNEFALTS 224


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/641 (38%), Positives = 357/641 (55%), Gaps = 58/641 (9%)

Query: 280 KPDGVSIASVLPACSHLEMLDTG------KEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           +P G S  S+    + +++L         K+IHA  + + +  + S +G  L+  Y  CR
Sbjct: 43  EPSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLG-PLIHSYIGCR 101

Query: 334 EVECGRRVFD-FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT---TM 389
            +   R VFD F S     +WN MI  Y +    +E+L LF +M  +A   P +    T 
Sbjct: 102 NLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQM--LAHGRPTSADKYTF 159

Query: 390 SSVVPACVRSEAFPD-KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           + V  AC R        E +HG  +K G   D +V N+L++MYS   R+  +K +FD+M 
Sbjct: 160 TFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMP 219

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR--------------------- 487
            RD ++W +++ GY + G+    L+  RE+ +M   +N                      
Sbjct: 220 QRDVITWTSVVKGYAMRGE----LVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQ 275

Query: 488 --NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
             N++   DE     KPN   L+++L  C  L AL +GK IH Y  +N +     + +AL
Sbjct: 276 CFNDMLCHDEV----KPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTAL 331

Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGE 605
           +DMYAKCG ++ ARRVFD +  R+++TW  +I    MHG G E L     M+AEG     
Sbjct: 332 IDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEG----- 386

Query: 606 VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDA 665
            KP+++T + +   CSHSG+V EG+ +F+ M   +GI P  +HY C++DLLGRAG++E A
Sbjct: 387 FKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESA 446

Query: 666 YQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH---YVLLSNI 722
           ++ I  MP E D   AW +LL ACRIH +V++GE    ++  L P   SH   YVLLSN+
Sbjct: 447 FEAIKSMPMEPDVV-AWRALLSACRIHGDVDLGERIINHIAELCP--GSHGGGYVLLSNL 503

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+S   W+    VRK M + G    PGCSWIE    +H+FLA D  H +  +++  L  +
Sbjct: 504 YASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEV 563

Query: 783 SERMRKE-GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 841
             R+  E GYVP T  VL ++NEE+KE  +  HSEKLA+AFG+L+T  G TIR+ KNLR 
Sbjct: 564 LRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEG-TIRITKNLRT 622

Query: 842 CNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           C DCH A K IS + +REI++RD  RFH F+ G CSC DYW
Sbjct: 623 CEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 201/455 (44%), Gaps = 54/455 (11%)

Query: 69  TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
           T S   P +  F  +LK    +  +   KQIHA VV +G    + ++   L++ Y  C  
Sbjct: 47  TSSFSLPSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLA-QNTSLLGPLIHSYIGC-R 101

Query: 129 DMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS---FTLV 184
           ++     VFD+       + WN MI    +      +L  F  ML ++  P+S   +T  
Sbjct: 102 NLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQML-AHGRPTSADKYTFT 160

Query: 185 SVALACSNLSRRDGLR-LGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
            V  AC   SR   LR  G  VHG  ++ G E + F+ N+L+ MY+   R+ DAK +F  
Sbjct: 161 FVFTAC---SRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDE 217

Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG------------------------ 278
              RD+++W ++V   +   + + A      M  R                         
Sbjct: 218 MPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCF 277

Query: 279 --------IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
                   +KP+   + S+L AC+HL  LD GK IH Y  +N IL+ +S + +AL+DMY 
Sbjct: 278 NDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILL-SSNISTALIDMYA 336

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  ++C RRVFD +  + +  W +MI+G   +    E L  F +M    G  P+  T+ 
Sbjct: 337 KCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEM-LAEGFKPDDITLL 395

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
            V+  C  S    +   I    I L G+         L+D+  R GR+E +      M +
Sbjct: 396 GVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPM 455

Query: 450 R-DTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
             D V+W  +++    C  HGD  +  R + ++ E
Sbjct: 456 EPDVVAWRALLSA---CRIHGDVDLGERIINHIAE 487



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 68/471 (14%)

Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
           SSF+L S +     L +R  L   +Q+H   +  G   NT ++  L+  Y     +  A+
Sbjct: 48  SSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFAR 107

Query: 238 TLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG--IKPDGVSIASVLPACS 294
            +F  F      + WN ++ + S+     E++    QM   G     D  +   V  ACS
Sbjct: 108 IVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACS 167

Query: 295 -HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
            H  +   G+ +H   +++    D  FVG++LV+MY     +   +RVFD +  + +  W
Sbjct: 168 RHPTLRGYGENVHGMVVKDGYESD-IFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITW 226

Query: 354 NAMITGY-----------------GQNE--------------YDEEALMLFIKMEEVAGL 382
            +++ GY                 G+N+              +  EAL  F  M     +
Sbjct: 227 TSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEV 286

Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKT 442
            PN   + S++ AC    A    + IH +  K  +     +  AL+DMY++ GRI+ ++ 
Sbjct: 287 KPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARR 346

Query: 443 IFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
           +FD +  RD ++W +MI+G ++ G   + L    EM              L E     KP
Sbjct: 347 VFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEM--------------LAEGF---KP 389

Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNF 557
           + ITL+ VL GC     + +G  I      +M+    +V        L+D+  + G L  
Sbjct: 390 DDITLLGVLNGCSHSGLVEEGLSI----FHDMIPLWGIVPKLEHYGCLIDLLGRAGRLES 445

Query: 558 ARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAE---GSRGG 604
           A      MP+  +V+ W  ++ A  +HG+  ++ E + N +AE   GS GG
Sbjct: 446 AFEAIKSMPMEPDVVAWRALLSACRIHGD-VDLGERIINHIAELCPGSHGG 495



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 18/231 (7%)

Query: 34  LPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSD-IQPDNFAFPAVLKAVAGIQD 92
           +PG   R   SW   +        + EA+  + +M   D ++P+     ++L A A +  
Sbjct: 249 MPG---RNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGA 305

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L  GK IH ++ K    LSS  ++  L++MY KCG  +    +VFD + ++D ++W SMI
Sbjct: 306 LDQGKWIHVYIDKNRILLSS-NISTALIDMYAKCGR-IDCARRVFDGLHKRDLLTWTSMI 363

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLR 211
           + L   G     L  F  ML    +P   TL+ V   CS+     +GL +   +      
Sbjct: 364 SGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDM------ 417

Query: 212 VGEWNTFI----MNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
           +  W           L+ +  + GR++ A    KS   + D+V+W  ++S+
Sbjct: 418 IPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSA 468


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/611 (36%), Positives = 342/611 (55%), Gaps = 56/611 (9%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           K++HA+ L+ +  + +S   S +  +          + +F  +   ++  WN  +  + +
Sbjct: 32  KQLHAHLLKTNSPL-SSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAE 90

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
            +   +A+ LF ++ E   + P+  T S V+ AC R     + + +HG+  KLGL  + +
Sbjct: 91  GDSPADAISLFYRLREF-DISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMF 149

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN-------------------------- 456
           +QN ++ +Y+  G I +++ +FD M  RD ++WN                          
Sbjct: 150 LQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERN 209

Query: 457 -----TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
                +MI GY  CG+  +A+ L  EM+              D  +L   PN +T++ VL
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEME--------------DAGLL---PNEVTVVAVL 252

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  +  L  G+ IH ++ R+    ++ V + L+DMY KCGCL  A R+FD M  R V+
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +W+ +I     HG  ++ L L   M+  G     VKPN VTFI +  ACSH GMV +G  
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTG-----VKPNAVTFIGILHACSHMGMVEKGRK 367

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M  DYGI P  +HY C+VDL  RAG +++A++ I  MP   +    W +LLG C++
Sbjct: 368 YFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGV-VWGALLGGCKV 426

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           H+N+++ E A ++L  L+P    +YV+LSNIY+ A  W+    VRK M++ GV+K PG S
Sbjct: 427 HKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWS 486

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            I     ++ F+AGD +H Q+E++    E L +RM+ +GYVP+TS VL ++ E++KE  L
Sbjct: 487 SIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFL 546

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSEKLA+ FG++ T PGT IR+ KNLRVC DCH A K IS + +REI++RD  RFH F
Sbjct: 547 YRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCF 606

Query: 872 KNGTCSCGDYW 882
           KNG+CSCGDYW
Sbjct: 607 KNGSCSCGDYW 617



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 173/381 (45%), Gaps = 52/381 (13%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           AK +F+  +  ++  WNT + S ++ D   +A+    ++    I PD  + + VL ACS 
Sbjct: 66  AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN- 354
           L  +  GK +H Y  +   L  N F+ + +V +Y  C E+   R+VFD +  + +  WN 
Sbjct: 126 LLDVRNGKIVHGYVEKLG-LQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNI 184

Query: 355 ------------------------------AMITGYGQNEYDEEALMLFIKMEEVAGLWP 384
                                         +MI GY Q    +EA+ LF++ME+ AGL P
Sbjct: 185 MIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED-AGLLP 243

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
           N  T+ +V+ AC           IH  + + G  ++  V N L+DMY + G +E +  IF
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D+ME R  VSW+ MI G    G+  DAL L  +M N                    KPN+
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTG-----------------VKPNA 346

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFD 563
           +T + +L  C  +  + KG++  A   R+  +   +     +VD++++ G L  A     
Sbjct: 347 VTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIM 406

Query: 564 LMPVR-NVITWNVIIMAYGMH 583
            MP+  N + W  ++    +H
Sbjct: 407 NMPIAPNGVVWGALLGGCKVH 427



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 177/351 (50%), Gaps = 44/351 (12%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   LRS A  +   +AI  +  +   DI PD++    VLKA + + D+  GK +H +V 
Sbjct: 81  WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G   S++ + N +V++Y  CG ++    KVFD++ ++D ++WN MIA L + G  + A
Sbjct: 141 KLGLQ-SNMFLQNMIVHLYALCG-EIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGA 198

Query: 165 LEAFRMMLYSNVE-------------------------------PSSFTLVSVALACSNL 193
            + F  M   NV                                P+  T+V+V +AC+++
Sbjct: 199 YKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADM 258

Query: 194 SRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWN 252
                L LGR++H  S R G E N  + N L+ MY K G ++DA  +F + E+R +VSW+
Sbjct: 259 G---NLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWS 315

Query: 253 TIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
            +++ L+ + +  +A+    +M   G+KP+ V+   +L ACSH+ M++ G++  A   R+
Sbjct: 316 AMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD 375

Query: 313 DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA----LWNAMITG 359
             ++        +VD++     ++      +FI +  IA    +W A++ G
Sbjct: 376 YGIVPRIEHYGCMVDLFSRAGLLQ---EAHEFIMNMPIAPNGVVWGALLGG 423



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 177/404 (43%), Gaps = 51/404 (12%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQ+HAH++K    LSS+ ++   V       S       +F  +   +   WN+ + +  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSR--VASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
                  A+  F  +   ++ P  +T   V  ACS L     +R G+ VHG   ++G + 
Sbjct: 90  EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLL---DVRNGKIVHGYVEKLGLQS 146

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL----------------- 258
           N F+ N ++ +YA  G +  A+ +F     RD+++WN +++ L                 
Sbjct: 147 NMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMP 206

Query: 259 --------------SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
                         +Q  K  EA+    +M   G+ P+ V++ +VL AC+ +  L  G+ 
Sbjct: 207 ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRR 266

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IH ++ R+     N  V + L+DMY  C  +E   R+FD + ++ +  W+AMI G   + 
Sbjct: 267 IHDFSNRSGYE-KNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG 325

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV- 423
             E+AL LF KM    G+ PNA T   ++ AC             G      + RD  + 
Sbjct: 326 RAEDALALFNKMIN-TGVKPNAVTFIGILHACSHMGMVEK-----GRKYFASMTRDYGIV 379

Query: 424 -----QNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
                   ++D++SR G ++ +     +M +  + V W  ++ G
Sbjct: 380 PRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 42/322 (13%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   SW   +   A+  + +EAI  ++EM  + + P+     AVL A A + +L LG++I
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H    + GY   ++ V NTL++MY KCG  + D  ++FD + E+  VSW++MIA L   G
Sbjct: 268 HDFSNRSGYE-KNIRVCNTLIDMYVKCGC-LEDACRIFDNMEERTVVSWSAMIAGLAAHG 325

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
           + + AL  F  M+ + V+P++ T + +  ACS++     +  GR+   +  R        
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHMGM---VEKGRKYFASMTRD------- 375

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
                  Y  + R++                +  +V   S+     EA  F+  M    I
Sbjct: 376 -------YGIVPRIE---------------HYGCMVDLFSRAGLLQEAHEFIMNMP---I 410

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
            P+GV   ++L  C   + +   +E   +  + D L D  +V   L ++Y      E   
Sbjct: 411 APNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYV--VLSNIYAEAGRWEDVA 468

Query: 340 RVFDFISD---KKIALWNAMIT 358
           RV   + D   KK   W++++ 
Sbjct: 469 RVRKLMRDRGVKKTPGWSSIMV 490


>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
          Length = 608

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 331/595 (55%), Gaps = 22/595 (3%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           + +HA  L+   L D     + LV  Y     +   RR FD    + + L++A++     
Sbjct: 21  RRVHARLLKEG-LADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSH 79

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
           +   E  L L  +M     L P+   ++S+  A  R  +      +H H        D  
Sbjct: 80  SSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNV 139

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM---- 478
           V+++L+DMY + G  + ++ +FD + V+++V W  +I+GY   G  G+AL L + M    
Sbjct: 140 VKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHG 199

Query: 479 --------QNMEEEKNRNNVYDLDETVLRPK---PNSITLMTVLPGCGALSALAKGKEIH 527
                       +  N      L   + R      ++  L TV+ G   L+AL  G+++H
Sbjct: 200 LFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLH 259

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            + +R    + ++VG+ALVDMY+KC  ++ AR VF+ + VR+VI+W  I++    HG  +
Sbjct: 260 GFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAE 319

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           EV  L   M+  G     +KPNEVTF+ L  ACSH+G+V +G  LF  MK +YG++P   
Sbjct: 320 EVFALYNRMLLAG-----MKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQ 374

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY C +DLL R+G + +A +LI  MP E D+A  W +LL AC+ H + ++    A NL  
Sbjct: 375 HYTCYLDLLSRSGYLSEAEKLITTMPYEPDEA-TWGALLSACKKHNDTQMCLRVADNLLE 433

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           L P   S Y+LLSN+Y+    WD    VRK M EM +RK PG SW+E G E   F AG+ 
Sbjct: 434 LRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEV 493

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
                E++  FLE L   MRK GYVPDTS V+H++ E EKE  L  HSE+LA+AFGIL +
Sbjct: 494 PLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKS 553

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           PPG+ IRV KNLRVC DCH   KFIS I  R+II+RD  RFHHF++G CSC ++W
Sbjct: 554 PPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 202/455 (44%), Gaps = 65/455 (14%)

Query: 200 RLGRQVHGNSLRVGEWNTFIMNALM-AMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           R  R+VH   L+ G  +     AL+ + YA+   + DA+  F     RDL  ++ +++++
Sbjct: 18  RAVRRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAV 77

Query: 259 SQN-DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           S + D  L   +  R ++   ++PD   +AS+  A   L  L  G+++HA+   +    D
Sbjct: 78  SHSSDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSAD 137

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N  V S+L+DMYC C   +  R+VFD I  K   +W A+I+GY  N    EAL LF  M 
Sbjct: 138 N-VVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMP 196

Query: 378 E---------------------VAGLW----------PNATTMSSVVPACVRSEAFPDKE 406
                                   GL+           +A  +++V+       A     
Sbjct: 197 AHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGR 256

Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
            +HG  ++LG      V NAL+DMYS+   I  ++ +F+ + VRD +SW T++ G     
Sbjct: 257 QLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGE---A 313

Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGK 524
           QHG A                  V+ L   +L    KPN +T + ++  C     + KG+
Sbjct: 314 QHGRA----------------EEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGR 357

Query: 525 EIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGM 582
           ++     R   +   V   +  +D+ ++ G L+ A ++   MP   +  TW  ++ A   
Sbjct: 358 QLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKK 417

Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIAL 616
           H + Q  L +  N++       E++P +  T+I L
Sbjct: 418 HNDTQMCLRVADNLL-------ELRPKDPSTYILL 445



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 42/282 (14%)

Query: 60  EAILSYIEMTRSD--IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           E +L  +    SD  ++PD+F   ++  A   ++ L LG+Q+HAH     Y   +V V +
Sbjct: 84  ELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNV-VKS 142

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           +L++MY KCG    D  KVFD I  K+ V W ++I+     G    AL+ F+ M    + 
Sbjct: 143 SLIDMYCKCGVPQ-DARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL- 200

Query: 178 PSSFT---LVSVALACSNLS---------RRDGLR---------------------LGRQ 204
              FT   L+S  +   N +         RRD +R                     LGRQ
Sbjct: 201 ---FTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQ 257

Query: 205 VHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
           +HG  +R+G  ++ I+ NAL+ MY+K   +  A+ +F+    RD++SW TI+   +Q+ +
Sbjct: 258 LHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGR 317

Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
             E      +M L G+KP+ V+   ++ ACSH  ++  G+++
Sbjct: 318 AEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQL 359


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/580 (37%), Positives = 341/580 (58%), Gaps = 24/580 (4%)

Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
           +++HA+ + + +    S + + L+ + C    +   RR+F  + +    L+++++    +
Sbjct: 44  QQVHAHIIVSGLHRSRSLL-TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSK 102

Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
             +  + ++ + +M   +G   +  T +SV+ AC    A    + IH H +  G G D Y
Sbjct: 103 FGFSIDTVLFYRRML-FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMY 161

Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
           VQ AL+ +Y++   ++++K +FD M  R  ++WN++I+GY   G   +++ L   M  ME
Sbjct: 162 VQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM--ME 219

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
                             +P+S T++++L  C  L AL  G  +H YA  N    +VV+G
Sbjct: 220 SGF---------------QPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 264

Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
           ++L++MY +CG ++ AR VFD M  RNV+TW  +I  YGMHG G++ +EL   M A G R
Sbjct: 265 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324

Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
                PN +TF+A+ +AC+HSG++ +G  +F  MK+ YG+ P  +H  C+VD+ GRAG +
Sbjct: 325 -----PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLL 379

Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
            DAYQ I    P+      W+S+LGACR+H+N ++G   A+++  +EP+   HYV+LSNI
Sbjct: 380 NDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNI 439

Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
           Y+ A   D+   VR  M    ++K+ G S IE   + + F  GD SH Q+  ++ +L+ L
Sbjct: 440 YALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDEL 499

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
             R  + GYVP    ++H++ EEE++  L  HSEKLA+AFG+L T  G TIR+ KNLR+C
Sbjct: 500 MCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRIC 559

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            DCH A K IS I  REII+RD  RFHHFK+G+CSC DYW
Sbjct: 560 EDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 192/367 (52%), Gaps = 14/367 (3%)

Query: 72  DIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMW 131
           D Q  +    A+L++   +++L   +Q+HAH++  G   S  ++   L+++    GS  +
Sbjct: 22  DTQSHSPVHEALLRSGPRLRNL---QQVHAHIIVSGLHRSR-SLLTKLISLVCTAGSITY 77

Query: 132 DVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACS 191
              ++F  +   D   ++S++    +FG     +  +R ML+S    S++T  SV  AC+
Sbjct: 78  -ARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACA 136

Query: 192 NLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS 250
           +LS    LRLG+++H + +  G   + ++  AL+A+YAK   +  AK +F +   R +++
Sbjct: 137 DLS---ALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIA 193

Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
           WN+++S   QN    E++     M   G +PD  +I S+L +CS L  LD G  +H YA 
Sbjct: 194 WNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYAD 253

Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
            N   + N  +G++L++MY  C  V   R VFD + ++ +  W AMI+GYG + Y  +A+
Sbjct: 254 GNGFDL-NVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAM 312

Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN--ALM 428
            LF +M    G  PN  T  +V+ AC  S    D   +   ++K   G    V++   ++
Sbjct: 313 ELFTEMRAY-GPRPNNITFVAVLSACAHSGLIDDGRRVFS-SMKEAYGLVPGVEHNVCMV 370

Query: 429 DMYSRMG 435
           DM+ R G
Sbjct: 371 DMFGRAG 377



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 134/247 (54%), Gaps = 6/247 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           + +L Y  M  S     N+ F +V+KA A +  L LGK+IH+HV+  GYG S + V   L
Sbjct: 108 DTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG-SDMYVQAAL 166

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
           + +Y K  SDM    KVFD + ++  ++WNS+I+   + G    ++  F +M+ S  +P 
Sbjct: 167 IALYAK-ASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225

Query: 180 SFTLVSVALACSNLSRRD-GLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKT 238
           S T+VS+  +CS L   D G  L     GN     + N  +  +L+ MY + G V  A+ 
Sbjct: 226 SATIVSLLSSCSQLGALDFGCWLHDYADGNGF---DLNVVLGTSLINMYTRCGNVSKARE 282

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +F S ++R++V+W  ++S    +    +A+    +M   G +P+ ++  +VL AC+H  +
Sbjct: 283 VFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGL 342

Query: 299 LDTGKEI 305
           +D G+ +
Sbjct: 343 IDDGRRV 349



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +         R+A+  + EM     +P+N  F AVL A A    +  G+++ +  
Sbjct: 294 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSS- 352

Query: 104 VKYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVFDRITEKD--QVSWNSMIATLCRFGK 160
           +K  YGL      N  +V+M+G+ G  + D Y+   +   K+     W SM+   CR  +
Sbjct: 353 MKEAYGLVPGVEHNVCMVDMFGRAGL-LNDAYQFIKKFIPKEPGPAVWTSMLGA-CRMHR 410

Query: 161 -WDLALEAFRMMLYSNVEP 178
            +DL ++    +L  +VEP
Sbjct: 411 NFDLGVKVAEHVL--SVEP 427


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/594 (37%), Positives = 348/594 (58%), Gaps = 25/594 (4%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C+    +   K  H   +R ++  D + + + L++ Y  C  VE  R+VFD + ++
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVT-LSNVLINAYSKCGFVELARQVFDGMLER 127

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
            +  WN MI  Y +N  + EAL +F +M    G   +  T+SSV+ AC  +    + + +
Sbjct: 128 SLVSWNTMIGLYTRNRMESEALDIFWEMRN-EGFKFSEFTISSVLSACGANCDALECKKL 186

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  ++K  L  + YV  AL+D+Y++ G I  +  +F+ M+ + +V+W++M+ GY     +
Sbjct: 187 HCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNY 246

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +AL+L R  Q M  E+N+                  TL +V+  C  L+AL +GK++HA
Sbjct: 247 EEALLLYRRAQRMSLEQNQ-----------------FTLSSVICACSNLAALIEGKQMHA 289

Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
              ++   ++V V S+ VDMYAKCG L  +  +F  +  +N+  WN II  +  H   +E
Sbjct: 290 VIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKE 349

Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
           V+ L + M  +G     + PNEVTF +L + C H+G+V EG   F  M+  YG+ P+  H
Sbjct: 350 VMILFEKMQQDG-----MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 404

Query: 649 YACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLL 708
           Y+C+VD+LGRAG + +AY+LI  +P E   A  W SLL +CR+ +N+E+ E+AA+ LF L
Sbjct: 405 YSCMVDILGRAGLLSEAYELIKSIPFE-PTASIWGSLLASCRVCKNLELAEVAAKKLFEL 463

Query: 709 EPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGS 768
           EP+ A ++VLLSNIY++ + W++    RK +++  V+K  G SWI+  D++H F  G+ S
Sbjct: 464 EPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESS 523

Query: 769 HQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTP 828
           H +  ++   L+NL   +RK GY P     LH+V   +KE LL  HSEKLA+ FG++  P
Sbjct: 524 HPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLP 583

Query: 829 PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            G+T+R+ KNLR+C DCH+  K  S    R II+RD  RFHHF +G CSCG++W
Sbjct: 584 EGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 198/381 (51%), Gaps = 9/381 (2%)

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
           VT++N L+N Y KCG  +    +VFD + E+  VSWN+MI    R      AL+ F  M 
Sbjct: 98  VTLSNVLINAYSKCGF-VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMR 156

Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
               + S FT+ SV  AC   +  D L   +++H  S++   + N ++  AL+ +YAK G
Sbjct: 157 NEGFKFSEFTISSVLSACG--ANCDALEC-KKLHCLSMKTSLDLNLYVGTALLDLYAKCG 213

Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
            ++DA  +F+S +D+  V+W+++V+   Q+  + EA++  R+     ++ +  +++SV+ 
Sbjct: 214 MINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 273

Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
           ACS+L  L  GK++HA  +R      N FV S+ VDMY  C  +     +F  + +K I 
Sbjct: 274 ACSNLAALIEGKQMHA-VIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIE 332

Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-KEGIHG 410
           LWN +I+G+ ++   +E ++LF KM++  G+ PN  T SS++  C  +    + +     
Sbjct: 333 LWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 391

Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHG 469
                GL  +    + ++D+  R G +  +  +   +    T S W +++    +C    
Sbjct: 392 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLE 451

Query: 470 DALMLLREMQNMEEEKNRNNV 490
            A +  +++  +E E   N+V
Sbjct: 452 LAEVAAKKLFELEPENAGNHV 472



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 140/282 (49%), Gaps = 23/282 (8%)

Query: 385 NATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIF 444
            A+    ++  C R+ A  + +  HG  +++ L  D  + N L++ YS+ G +E+++ +F
Sbjct: 62  QASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVF 121

Query: 445 DDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS 504
           D M  R  VSWNTMI  YT      +AL +  EM        RN  +   E         
Sbjct: 122 DGMLERSLVSWNTMIGLYTRNRMESEALDIFWEM--------RNEGFKFSE--------- 164

Query: 505 ITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDL 564
            T+ +VL  CGA     + K++H  +++  L  ++ VG+AL+D+YAKCG +N A +VF+ 
Sbjct: 165 FTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFES 224

Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
           M  ++ +TW+ ++  Y      +E L L +      ++   ++ N+ T  ++  ACS+  
Sbjct: 225 MQDKSSVTWSSMVAGYVQSKNYEEALLLYRR-----AQRMSLEQNQFTLSSVICACSNLA 279

Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
            + EG  +   ++   G   +    +  VD+  + G + ++Y
Sbjct: 280 ALIEGKQMHAVIRKS-GFGSNVFVASSAVDMYAKCGSLRESY 320



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 136/261 (52%), Gaps = 6/261 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    R+    EA+  + EM     +   F   +VL A     D    K++H   
Sbjct: 131 SWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLS 190

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K    L ++ V   L+++Y KCG  + D  +VF+ + +K  V+W+SM+A   +   ++ 
Sbjct: 191 MKTSLDL-NLYVGTALLDLYAKCGM-INDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  +R     ++E + FTL SV  ACSNL+    L  G+Q+H    + G   N F+ ++
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLA---ALIEGKQMHAVIRKSGFGSNVFVASS 305

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
            + MYAK G + ++  +F   +++++  WNTI+S  +++ +  E ++   +M   G+ P+
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 365

Query: 283 GVSIASVLPACSHLEMLDTGK 303
            V+ +S+L  C H  +++ G+
Sbjct: 366 EVTFSSLLSVCGHTGLVEEGR 386



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           Q +   +W   +    +S  + EA+L Y    R  ++ + F   +V+ A + +  L  GK
Sbjct: 226 QDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 285

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
           Q+HA + K G+G S+V VA++ V+MY KCGS + + Y +F  + EK+   WN++I+   +
Sbjct: 286 QMHAVIRKSGFG-SNVFVASSAVDMYAKCGS-LRESYIIFSEVQEKNIELWNTIISGFAK 343

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR----RDGLRLGRQVHGNSLRVG 213
             +    +  F  M    + P+  T  S+   C +       R   +L R  +G S  V 
Sbjct: 344 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 403

Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVS-WNTIVSS 257
            +     + ++ +  + G + +A  L KS       S W ++++S
Sbjct: 404 HY-----SCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/686 (34%), Positives = 377/686 (54%), Gaps = 40/686 (5%)

Query: 223  LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM-FLRQMALRGIKP 281
            L++ Y   G    A  +F     R+ + WN+ V     +   L  V+   +++  +G+  
Sbjct: 462  LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521

Query: 282  DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
            D    +  L  C+ +  +  G EIH   ++    +D  ++  AL++ Y  C  +E   +V
Sbjct: 522  DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLD-VYLRCALMNFYGRCWGLEKANQV 580

Query: 342  FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
            F  + + +  LWN  I    Q+E  ++ + LF KM+  + L     T+  V+ A +    
Sbjct: 581  FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ-FSFLKAETATIVRVLQASISELG 639

Query: 402  FPDK-EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
            F +  +  HG+ ++ G   D YV  +L+DMY +   +  ++ +FD+M+ R+  +WN++++
Sbjct: 640  FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVS 699

Query: 461  GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD------------------------ET 496
            GY+  G   DAL LL +M   E+E  + ++   +                        E 
Sbjct: 700  GYSFKGMFEDALRLLNQM---EKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEG 756

Query: 497  VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
            V+   PNS ++  +L  C +LS L KGKEIH  +IRN    DV V +AL+DMY+K   L 
Sbjct: 757  VM---PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLK 813

Query: 557  FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
             A +VF  +  + + +WN +IM + + G G+E + +   M   G     V P+ +TF AL
Sbjct: 814  NAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG-----VGPDAITFTAL 868

Query: 617  FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             +AC +SG++ EG   F  M  DY I P  +HY C+VDLLGRAG +++A+ LI+ MP + 
Sbjct: 869  LSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKP 928

Query: 677  DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
            D A  W +LLG+CRIH+N++  E AA+NLF LEP+ +++Y+L+ N+YS    W+    +R
Sbjct: 929  D-ATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLR 987

Query: 737  KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS 796
            + M   GVR     SWI+    +H F + +  H  + +++  L  L   M+K GYVPD +
Sbjct: 988  ELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVN 1047

Query: 797  CVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
            CV  N++E EK+ +L  H+EKLAI +G++    G  IRV KN R+C+DCH A K+IS ++
Sbjct: 1048 CVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVK 1107

Query: 857  SREIILRDVRRFHHFKNGTCSCGDYW 882
            +RE+ LRD  RFHHF+ G CSC D+W
Sbjct: 1108 ARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 195/395 (49%), Gaps = 50/395 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           S++E  +S A S      +  + E+    +  D+  +   LK    + D+ LG +IH  +
Sbjct: 492 SFVEEFKSSAGSLHI--VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCL 549

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK---VFDRITEKDQVSWNSMIATLCRFGK 160
           +K G+ L  V +   L+N YG+C    W + K   VF  +   + + WN  I    +  K
Sbjct: 550 IKRGFDLD-VYLRCALMNFYGRC----WGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 604

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFI 219
               +E FR M +S ++  + T+V V  A  ++S    L +G++ HG  LR G + + ++
Sbjct: 605 LQKGVELFRKMQFSFLKAETATIVRVLQA--SISELGFLNMGKETHGYVLRNGFDCDVYV 662

Query: 220 MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
             +L+ MY K   +  A+ +F + ++R++ +WN++VS  S    F +A+  L QM   GI
Sbjct: 663 GTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 722

Query: 280 KPDGV-----------------------------------SIASVLPACSHLEMLDTGKE 304
           KPD V                                   SI  +L AC+ L +L  GKE
Sbjct: 723 KPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE 782

Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
           IH  ++RN   I++ FV +AL+DMY     ++   +VF  I +K +A WN MI G+    
Sbjct: 783 IHCLSIRNG-FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 841

Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
             +EA+ +F +M++V G+ P+A T ++++ AC  S
Sbjct: 842 LGKEAISVFNEMQKV-GVGPDAITFTALLSACKNS 875



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 137/295 (46%), Gaps = 42/295 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA-VAGIQDLSLGKQIHAHV 103
           W E++    +S + ++ +  + +M  S ++ +      VL+A ++ +  L++GK+ H +V
Sbjct: 592 WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYV 651

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK-------------------- 143
           ++ G+    V V  +L++MY K  S +     VFD +  +                    
Sbjct: 652 LRNGFD-CDVYVGTSLIDMYVKNHS-LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 709

Query: 144 ---------------DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
                          D V+WN MI+    +G    AL  F  M    V P+S ++  +  
Sbjct: 710 ALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLR 769

Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
           AC++LS    L+ G+++H  S+R G   + F+  AL+ MY+K   + +A  +F+  +++ 
Sbjct: 770 ACASLSL---LQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 826

Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
           L SWN ++   +      EA+    +M   G+ PD ++  ++L AC +  ++  G
Sbjct: 827 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 881


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 264/740 (35%), Positives = 403/740 (54%), Gaps = 38/740 (5%)

Query: 61   AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
            AI  ++ M +S ++       +VL A+  + +L LG  +HA  +K G   S++ V ++LV
Sbjct: 311  AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA-SNIYVGSSLV 369

Query: 121  NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
            +MY KC   M    KVF+ + E++ V WN+MI      G+    +E F  M  S      
Sbjct: 370  SMYSKC-EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428

Query: 181  FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
            FT  S+   C+       L +G Q H   ++     N F+ NAL+ MYAK G ++DA+ +
Sbjct: 429  FTFTSLLSTCA---VSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485

Query: 240  FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
            F+   DRD VSWNTI+    Q++   EA     +M   GI  DG  +AS L AC+++  L
Sbjct: 486  FEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGL 545

Query: 300  DTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
              GK++H  +++  +  D     GS+L+DMY  C  +E  R+VF  + +  +   NA+I 
Sbjct: 546  YQGKQVHCLSVKCGL--DRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIA 603

Query: 359  GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            GY QN   EEA++LF +M    G+ P+  T +++V AC + E+       HG  IK G  
Sbjct: 604  GYSQNNL-EEAVVLFQEML-TKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFS 661

Query: 419  RD-RYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGDALMLLR 476
             +  Y+  +L+ +Y    R+  +  +F ++   +  V W  M++G++  G + +AL   +
Sbjct: 662  SEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721

Query: 477  EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
            EM++             D  +    P+  T +TVL  C  LS+L +G+ IH+        
Sbjct: 722  EMRH-------------DGAL----PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764

Query: 537  TDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLELLKN 595
             D +  + L+DMYAKCG +  + +VFD M  R NV++WN +I  Y  +G  ++ L++  +
Sbjct: 765  LDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824

Query: 596  MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
            M     R   + P+E+TF+ +  ACSH+G VS+G  +F  M   YGIE   DH AC+VDL
Sbjct: 825  M-----RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879

Query: 656  LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
            LGR G +++A   I     + D A  WSSLLGACRIH +   GEIAA+ L  LEP  +S 
Sbjct: 880  LGRWGYLQEADDFIEAQNLKPD-ARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSA 938

Query: 716  YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
            YVLLSNIY+S   W++A  +RK M++ GV+K PG SWI+ G   H F AGD SH    ++
Sbjct: 939  YVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKI 998

Query: 776  HGFLENLSERMRKEGYV-PD 794
              FLE+L + M+ +  V PD
Sbjct: 999  EMFLEDLYDLMKDDAVVNPD 1018



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 271/582 (46%), Gaps = 74/582 (12%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L   +   Q  + + S++ +  + I P+ F F  VL   A   ++  G+QIH  +
Sbjct: 127 AWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSM 186

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G   +S      LV+MY KC   + D  +VFD I + + V W  + +   + G  + 
Sbjct: 187 IKMGLERNSYC-GGALVDMYAKC-DRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEE 244

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+  F  M      P     V+V                             NT+I    
Sbjct: 245 AVIVFERMRGEGHRPDHLAFVTVI----------------------------NTYI---- 272

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
                 LG++ DA+ LF      D+V+WN ++S   +    + A+ +   M    +K   
Sbjct: 273 -----SLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTR 327

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
            ++ SVL A   +  LD G  +HA A++   L  N +VGS+LV MY  C ++E   +VF+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFE 386

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            + ++   LWNAMI GY  N    + + LF+ M+  +G   +  T +S++  C  S    
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS-SGYNIDDFTFTSLLSTCAVSHDLE 445

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
                H   IK  L ++ +V NAL+DMY++ G +E ++ IF+ M  RD VSWNT+I GY 
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT-----LMTVLPGCGALS 518
                              +++N +  +DL    +R     I      L + L  C  + 
Sbjct: 506 -------------------QDENESEAFDL---FMRMNSCGIVSDGACLASTLKACTNVH 543

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
            L +GK++H  +++  L   +  GS+L+DMY+KCG +  AR+VF  MP  +V++ N +I 
Sbjct: 544 GLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIA 603

Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
            Y  +   +E + L + M+ +G     V P+E+TF  +  AC
Sbjct: 604 GYSQNNL-EEAVVLFQEMLTKG-----VNPSEITFATIVEAC 639



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 287/609 (47%), Gaps = 36/609 (5%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   +R  A + +  + +  +++M  S    D+F F ++L   A   DL +G Q H+ ++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K      ++ V N LV+MY KCG+ + D  ++F+ + ++D VSWN++I    +      A
Sbjct: 456 KKKL-TKNLFVGNALVDMYAKCGA-LEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEA 513

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
            + F  M    +      L S   AC+N+    GL  G+QVH  S++ G +      ++L
Sbjct: 514 FDLFMRMNSCGIVSDGACLASTLKACTNV---HGLYQGKQVHCLSVKCGLDRVLHTGSSL 570

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MY+K G ++DA+ +F S  +  +VS N +++  SQN+   EAV+  ++M  +G+ P  
Sbjct: 571 IDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTKGVNPSE 629

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF- 342
           ++ A+++ AC   E L  G + H   ++     +  ++G +L+ +Y N R +     +F 
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFS 689

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           +  S K I LW  M++G+ QN + EEAL  + +M     L P+  T  +V+  C    + 
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGAL-PDQATFVTVLRVCSVLSSL 748

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITG 461
            +   IH     L    D    N L+DMY++ G ++ S  +FD+M  R + VSWN++I G
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLING 808

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           Y   G   DAL +   M+                      P+ IT + VL  C     ++
Sbjct: 809 YAKNGYAEDALKIFDSMRQSH-----------------IMPDEITFLGVLTACSHAGKVS 851

Query: 522 KGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMA 579
            G++I    I    +   V   + +VD+  + G L  A    +   ++ +   W+ ++ A
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA 911

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
             +HG+     ++   + AE  R  E++P   +   L +    S    E  +   K   D
Sbjct: 912 CRIHGD-----DMRGEIAAE--RLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRD 964

Query: 640 YGIEPSPDH 648
            G++  P +
Sbjct: 965 RGVKKVPGY 973



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 274/582 (47%), Gaps = 67/582 (11%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L +GK +H+  +  G   S   + N +V++Y KC    +   K F+ + EKD  +WNSM+
Sbjct: 76  LRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSY-AEKQFNSL-EKDVTAWNSML 132

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           +     G+    L +F  +  + + P+ FT  S+ L+ S  +R   +  GRQ+H + +++
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTF-SIVLSTS--ARETNVEFGRQIHCSMIKM 189

Query: 213 G-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
           G E N++   AL+ MYAK  R+ DA+ +F    D + V W  + S   +     EAV+  
Sbjct: 190 GLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVF 249

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            +M   G +PD ++  +V                                    ++ Y +
Sbjct: 250 ERMRGEGHRPDHLAFVTV------------------------------------INTYIS 273

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
             +++  R +F  +    +  WN MI+G+G+   +  A+  F+ M + + +    +T+ S
Sbjct: 274 LGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRK-SSVKSTRSTLGS 332

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ A            +H  AIKLGL  + YV ++L+ MYS+  ++E +  +F+ +E R+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERN 392

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            V WN MI GY   G+    + L  +M        +++ Y++D+          T  ++L
Sbjct: 393 DVLWNAMIRGYAHNGESHKVMELFMDM--------KSSGYNIDD---------FTFTSLL 435

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C     L  G + H+  I+  L  ++ VG+ALVDMYAKCG L  AR++F+ M  R+ +
Sbjct: 436 STCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNV 495

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WN II  Y       E  +L   M + G     +  +     +   AC++   + +G  
Sbjct: 496 SWNTIIGGYVQDENESEAFDLFMRMNSCG-----IVSDGACLASTLKACTNVHGLYQGKQ 550

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
           + + +    G++      + ++D+  + G +EDA ++ + MP
Sbjct: 551 V-HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 288/583 (49%), Gaps = 44/583 (7%)

Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
           L+ VTV NT +++ GK    + D   +F  +   D V+WN MI+   + G   +A+E F 
Sbjct: 262 LAFVTVINTYISL-GK----LKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFL 316

Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
            M  S+V+ +  TL SV  A   ++  D   LG  VH  ++++G   N ++ ++L++MY+
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLD---LGLVVHAEAIKLGLASNIYVGSSLVSMYS 373

Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
           K  +++ A  +F++ E+R+ V WN ++   + N +  + +     M   G   D  +  S
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
           +L  C+    L+ G + H+  ++   L  N FVG+ALVDMY  C  +E  R++F+ + D+
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKK-LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492

Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
               WN +I GY Q+E + EA  LF++M    G+  +   ++S + AC         + +
Sbjct: 493 DNVSWNTIIGGYVQDENESEAFDLFMRMNS-CGIVSDGACLASTLKACTNVHGLYQGKQV 551

Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
           H  ++K GL R  +  ++L+DMYS+ G IE ++ +F  M     VS N +I GY+     
Sbjct: 552 HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNL 610

Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
            +A++L +EM              L + V    P+ IT  T++  C    +L  G + H 
Sbjct: 611 EEAVVLFQEM--------------LTKGV---NPSEITFATIVEACHKPESLTLGTQFHG 653

Query: 529 YAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVF-DLMPVRNVITWNVIIMAYGMHGEG 586
             I+   +++   +G +L+ +Y     +  A  +F +L   ++++ W  ++  +  +G  
Sbjct: 654 QIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713

Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM---DLFYKMKDDYGIE 643
           +E L+  K M  +G+      P++ TF+ +   CS    + EG     L + +  D    
Sbjct: 714 EEALKFYKEMRHDGAL-----PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
            S      ++D+  + G ++ + Q+ + M    +   +W+SL+
Sbjct: 769 TSN----TLIDMYAKCGDMKSSSQVFDEMRRRSNVV-SWNSLI 806



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 23/436 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    +     EA   ++ M    I  D     + LKA   +  L  GKQ+H   
Sbjct: 496 SWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLS 555

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           VK G     +   ++L++MY KCG  + D  KVF  + E   VS N++IA   +    + 
Sbjct: 556 VKCGLD-RVLHTGSSLIDMYSKCGI-IEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLEE 612

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMN 221
           A+  F+ ML   V PS  T  ++  AC    + + L LG Q HG  ++ G      ++  
Sbjct: 613 AVVLFQEMLTKGVNPSEITFATIVEAC---HKPESLTLGTQFHGQIIKWGFSSEGEYLGI 669

Query: 222 ALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
           +L+ +Y    R+ +A  LF      + +V W  ++S  SQN  + EA+ F ++M   G  
Sbjct: 670 SLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGAL 729

Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHA--YALRNDILIDNSFVGSALVDMYCNCREVECG 338
           PD  +  +VL  CS L  L  G+ IH+  + L +D+   +    + L+DMY  C +++  
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL---DELTSNTLIDMYAKCGDMKSS 786

Query: 339 RRVFDFISDK-KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
            +VFD +  +  +  WN++I GY +N Y E+AL +F  M + + + P+  T   V+ AC 
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACS 845

Query: 398 RSEAFPDKEGIHGHAI-KLGL-GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVS 454
            +    D   I    I + G+  R  +V   ++D+  R G ++ +    +   ++ D   
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVA-CMVDLLGRWGYLQEADDFIEAQNLKPDARL 904

Query: 455 WNTMITGYTICGQHGD 470
           W++++     C  HGD
Sbjct: 905 WSSLLGA---CRIHGD 917



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 206/458 (44%), Gaps = 64/458 (13%)

Query: 299 LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMIT 358
           L  GK +H+ +L   I  +   +G+A+VD+Y  C +V    + F+ + +K +  WN+M++
Sbjct: 76  LRIGKAVHSKSLILGIDSEGR-LGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133

Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
            Y       + L  F+ + E   ++PN  T S V+    R         IH   IK+GL 
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENL-IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192

Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
           R+ Y   AL+DMY++  R+  ++ +FD +   +TV W  + +GY   G   +A+++   M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 479 QNMEEEKNRNNVYDLDETVLR--------------PKPNSI------------------- 505
           +      +      +  T +               P P+ +                   
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAI 312

Query: 506 ----------------TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                           TL +VL   G ++ L  G  +HA AI+  LA+++ VGS+LV MY
Sbjct: 313 EYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           +KC  +  A +VF+ +  RN + WN +I  Y  +GE  +V+EL  +M + G        +
Sbjct: 373 SKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSG-----YNID 427

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           + TF +L + C+ S  +  G   F+ +     +  +      +VD+  + G +EDA Q+ 
Sbjct: 428 DFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIF 486

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
             M    +   +W++++G     +N    E  A +LF+
Sbjct: 487 EHMCDRDNV--SWNTIIGGYVQDEN----ESEAFDLFM 518



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 145/327 (44%), Gaps = 42/327 (12%)

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           + +H  ++ LG+  +  + NA++D+Y++  ++  ++  F+ +E +D  +WN+M++ Y+  
Sbjct: 80  KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSI 138

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           GQ G    +LR   ++ E    N ++          PN  T   VL      + +  G++
Sbjct: 139 GQPGK---VLRSFVSLFE----NLIF----------PNKFTFSIVLSTSARETNVEFGRQ 181

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   I+  L  +   G ALVDMYAKC  L  A+RVFD +   N + W  +   Y   G 
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGL 241

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
            +E + + + M  EG R     P+ + F+ +       G + +   LF +M       PS
Sbjct: 242 PEEAVIVFERMRGEGHR-----PDHLAFVTVINTYISLGKLKDARLLFGEM-------PS 289

Query: 646 PDHYACVVDLLG---RAGKVEDAYQLINMMPPEFDKA-GAWSSLLGACRIHQNVEIGEIA 701
           PD  A  V + G   R  ++      +NM             S+L A  I  N+++G + 
Sbjct: 290 PDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349

Query: 702 AQNLFLLEPDVASHYVLLSNIYSSAQL 728
                 L         L SNIY  + L
Sbjct: 350 HAEAIKLG--------LASNIYVGSSL 368



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 15/156 (9%)

Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
           AL  GK +H+ ++   + ++  +G+A+VD+YAKC  +++A + F+ +  ++V  WN ++ 
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133

Query: 579 AYGMHGEGQEVLE----LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
            Y   G+  +VL     L +N++          PN+ TF  + +  +    V  G  +  
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIF---------PNKFTFSIVLSTSARETNVEFGRQIHC 184

Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLIN 670
            M    G+E +      +VD+  +  ++ DA ++ +
Sbjct: 185 SMI-KMGLERNSYCGGALVDMYAKCDRLGDAQRVFD 219


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 332/565 (58%), Gaps = 30/565 (5%)

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC-VR 398
           ++FD I +    +WN M+  Y Q+   E+AL+L+ K+     + P+  T   VV AC VR
Sbjct: 84  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLY-KLMVKNNVGPDNYTYPLVVQACAVR 142

Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
              F  KE IH H +K+G   D YVQN L++MY+  G +  ++ +FD+  V D+VSWN++
Sbjct: 143 LLEFGGKE-IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201

Query: 459 ITGYTICGQHGDALMLLREMQNMEEEK-----------NRNNVYD------LDETVLRPK 501
           + GY   G  G  +   +    M+E+             +N +Y+      ++      +
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 261

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV----DMYAKCGCLNF 557
            + + +++VL  C  LS +  GK IH   IR  + + V + +AL+    DMY KCGC+  
Sbjct: 262 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVEN 321

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  VF+ M  + V +WN +I+   ++G  +  L++   M   G     V PNE+TF+ + 
Sbjct: 322 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNG-----VIPNEITFMGVL 376

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            AC H G+V EG   F  M + +GIEP+  HY C+VDLLGRAG + +A +LI  MP   D
Sbjct: 377 GACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPD 436

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRK 737
            A  W +LLGAC+ H + E+GE   + L  L+PD    +VLLSNI++S   W+  ++VR 
Sbjct: 437 VA-TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRG 495

Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
            MK+ GV K PGCS IE    +H+FLAGD +H    ++ G L  +++R++ EGY PDT+ 
Sbjct: 496 MMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNE 555

Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
           V  +++EEEKET L  HSEKLAIAFG+L   P T IR+ KNLR+CNDCH A K ISK  +
Sbjct: 556 VSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYA 615

Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
           REI++RD  RFH+FK G CSC DYW
Sbjct: 616 REIVVRDRHRFHYFKEGACSCMDYW 640



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 55/383 (14%)

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++FDRI   +   WN+M+    +    + AL  +++M+ +NV P ++T   V  AC+   
Sbjct: 84  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 143

Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF------------- 240
              G   G+++H + L+VG + + ++ N L+ MYA  G + DA+ LF             
Sbjct: 144 LEFG---GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 200

Query: 241 ---------------------KSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279
                                   +++D+VSW+ ++S   QN  + EA++   +M   G+
Sbjct: 201 ILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 260

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG--SALV----DMYCNCR 333
           + D V + SVL AC+HL ++ TGK IH   +R  I    S+V   +AL+    DMY  C 
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI---ESYVNLQNALIHMYSDMYMKCG 317

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            VE    VF+ + +K ++ WNA+I G   N   E +L +F +M+   G+ PN  T   V+
Sbjct: 318 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN-NGVIPNEITFMGVL 376

Query: 394 PACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR- 450
            AC R     D+   H  ++  K G+  +      ++D+  R G +  ++ + + M +  
Sbjct: 377 GAC-RHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAP 435

Query: 451 DTVSWNTMITGYTICGQHGDALM 473
           D  +W  ++     C +HGD  M
Sbjct: 436 DVATWGALLGA---CKKHGDTEM 455



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 44/298 (14%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG-KQIHAHV 103
           W   +R+  +SN   +A+L Y  M ++++ PDN+ +P V++A A ++ L  G K+IH HV
Sbjct: 97  WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHV 155

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS------------------------------DMWDV 133
           +K G+  S V V NTL+NMY  CG+                              DM  V
Sbjct: 156 LKVGFD-SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQV 214

Query: 134 ---YKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALAC 190
              +K+F+ + EKD VSW+++I+   + G ++ AL  F  M  + +      +VSV  AC
Sbjct: 215 MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 274

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA----KLGRVDDAKTLFKSFED 245
           ++LS    ++ G+ +HG  +R+G E    + NAL+ MY+    K G V++A  +F   E+
Sbjct: 275 AHLSI---VKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEE 331

Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
           + + SWN ++  L+ N     ++    +M   G+ P+ ++   VL AC H+ ++D G+
Sbjct: 332 KGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 389



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 188/407 (46%), Gaps = 66/407 (16%)

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           +D +  +F   E+ +   WNT++ +  Q++   +A++  + M    + PD  +   V+ A
Sbjct: 79  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD--------- 343
           C+   +   GKEIH + L+     D  +V + L++MY  C  +   R++FD         
Sbjct: 139 CAVRLLEFGGKEIHDHVLKVGFDSD-VYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197

Query: 344 -------------------------FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
                                     + +K +  W+A+I+GY QN   EEAL++FI+M  
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM-N 256

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM---- 434
             G+  +   + SV+ AC         + IHG  I++G+     +QNAL+ MYS M    
Sbjct: 257 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKC 316

Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
           G +E +  +F+ ME +   SWN +I G  + G    +L +  EM+N       N V    
Sbjct: 317 GCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN-------NGVI--- 366

Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI-RNMLATDVVVGSALVDMYAKCG 553
                  PN IT M VL  C  +  + +G+   A  I ++ +  +V     +VD+  + G
Sbjct: 367 -------PNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 419

Query: 554 CLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE-------GQEVLEL 592
            LN A ++ + MP+  +V TW  ++ A   HG+       G++++EL
Sbjct: 420 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIEL 466



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 12/225 (5%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +    ++  + EA++ +IEM  + ++ D     +VL A A +  +  GK IH  V
Sbjct: 231 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 290

Query: 104 VKYGYGLSSVTVANTLVNMYG----KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           ++ G   S V + N L++MY     KCG  + +  +VF+ + EK   SWN++I  L   G
Sbjct: 291 IRMGIE-SYVNLQNALIHMYSDMYMKCGC-VENALEVFNGMEEKGVSSWNALIIGLAVNG 348

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR--LGRQVHGNSLRVGEWNT 217
             + +L+ F  M  + V P+  T + V  AC ++   D  R      +  + +   E N 
Sbjct: 349 LVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI---EPNV 405

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSSLSQN 261
                ++ +  + G +++A+ L +S     D+ +W  ++ +  ++
Sbjct: 406 KHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKH 450


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/552 (38%), Positives = 324/552 (58%), Gaps = 25/552 (4%)

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
           R +   R +FD +  +    W+A+++ + ++     AL ++ +M    G        ++ 
Sbjct: 107 RGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTAS 166

Query: 393 VPACVRSEAFPDKEG--IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
                 + A   + G  +H H ++ G+  D  V +AL DMY++ GR++ ++++FD M VR
Sbjct: 167 SALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVR 226

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D VSW  M+  Y   G+ G+   L   M        R+ +           PN  T   V
Sbjct: 227 DVVSWTAMLDRYFDAGRDGEGFRLFVRMM-------RSGIL----------PNEFTYAGV 269

Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
           L  C   ++   GK++H    ++        GSALV MY+K G +  A RVF  MP  ++
Sbjct: 270 LRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDL 329

Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
           ++W  +I  Y  +G+  E L     +++ G R     P+ VTF+ + +AC+H+G+V +G+
Sbjct: 330 VSWTAMISGYAQNGQPDEALHCFDMLLSSGFR-----PDHVTFVGVLSACAHAGLVDKGL 384

Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
            +F+ +KD YGIE + DHYACV+DLL R+G  E A  +IN MP + +K   W+SLLG CR
Sbjct: 385 GIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKF-LWASLLGGCR 443

Query: 691 IHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGC 750
           IH+NV +   AA+ LF +EP+  + YV L+NIY+S  L+D+  ++R+ M+  G+ K P  
Sbjct: 444 IHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPAS 503

Query: 751 SWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETL 810
           SWIE G  +H FL GD SH Q+E+++  L+ L  +MR+EGYV DT  VLH+V +E+K+  
Sbjct: 504 SWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQD 563

Query: 811 LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
           +  HSE+LA+AFGI+ TP G+ I+V KNLR+C DCH   K ISKI  REII+RD  RFHH
Sbjct: 564 IGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHH 623

Query: 871 FKNGTCSCGDYW 882
           FKNG+CSC DYW
Sbjct: 624 FKNGSCSCRDYW 635



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 171/358 (47%), Gaps = 7/358 (1%)

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
           + V   NTLV   G+    +     +FDR+  +D  SW+++++   R G+   AL  +R 
Sbjct: 90  TDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRR 149

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML       +    + + A +  +     R GR++H + +R G + +  + +AL  MYAK
Sbjct: 150 MLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAK 209

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            GR+DDA+++F     RD+VSW  ++       +  E      +M   GI P+  + A V
Sbjct: 210 FGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGV 269

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L AC+       GK++H    ++    D+ F GSALV MY    ++    RVF  +    
Sbjct: 270 LRACAEFTSEKLGKQVHGRMAKSRT-GDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPD 328

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
           +  W AMI+GY QN   +EAL  F  M   +G  P+  T   V+ AC  +       GI 
Sbjct: 329 LVSWTAMISGYAQNGQPDEALHCF-DMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIF 387

Query: 410 GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTI 464
            H+IK   G +    +   ++D+ SR G  E ++ + + M V+ +   W +++ G  I
Sbjct: 388 -HSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRI 444



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 130/267 (48%), Gaps = 11/267 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTR--SDIQPDN-FAFPAVLKAVAGIQDLSLGKQIH 100
           SW   + +  R  Q R A+  Y  M R       DN F   + L A    +    G+++H
Sbjct: 126 SWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELH 185

Query: 101 AHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
            HVV+ G    +V V + L +MY K G  + D   VFDR+  +D VSW +M+      G+
Sbjct: 186 CHVVRRGIDADAV-VWSALADMYAKFGR-LDDARSVFDRMPVRDVVSWTAMLDRYFDAGR 243

Query: 161 WDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN--SLRVGEWNTF 218
                  F  M+ S + P+ FT   V  AC+  +     +LG+QVHG     R G+ + F
Sbjct: 244 DGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSE---KLGKQVHGRMAKSRTGD-SCF 299

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
             +AL+ MY+K G +  A  +F+     DLVSW  ++S  +QN +  EA+     +   G
Sbjct: 300 AGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSG 359

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEI 305
            +PD V+   VL AC+H  ++D G  I
Sbjct: 360 FRPDHVTFVGVLSACAHAGLVDKGLGI 386


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/762 (33%), Positives = 418/762 (54%), Gaps = 38/762 (4%)

Query: 34  LPGSQTRCKES--WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ 91
           LP S+   ++   W   +    R    +E I  +  M    ++PD ++   +L A  G  
Sbjct: 111 LPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDG-- 168

Query: 92  DLSLGKQIHAHVV-KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEK-DQVSWN 149
            L   KQIH + V K  YG     + + L+ MY  CG  + D +++F  + +K + V+WN
Sbjct: 169 HLGYAKQIHGYSVRKVFYG--DPFLESGLIYMYFSCGRPL-DAWRLFKELEDKGNVVAWN 225

Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
            MI      G W+ +LE + +    NV+  S +  S   AC    + + +  G QVH + 
Sbjct: 226 VMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACC---QGEFVSFGMQVHCDL 282

Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
           +++G E + ++  +L+ MY+K   V+DA+ +F     +    WN ++S+   N +  + +
Sbjct: 283 VKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGL 342

Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDM 328
              +QM +  I PD ++  +VL +C  +   D G+ IHA  ++  I   N  + SAL+ M
Sbjct: 343 KIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQ-SNVALQSALLTM 401

Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
           Y  C   +    +F+ I  + +  W +MI+G+ QN    EAL  +  M  V G  P++  
Sbjct: 402 YSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMT-VYGEKPDSDI 460

Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
           M+SVV AC   +       IHG AIK GL +D +V ++L+DMYS+    ++S  +F DM 
Sbjct: 461 MASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMP 520

Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
           +++ V+WN++I+ Y   G    ++ L  +M            Y L        P+S+++ 
Sbjct: 521 LKNLVAWNSIISCYCRNGLPDLSISLFSQMTQ----------YGL-------FPDSVSIT 563

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR 568
           +VL    +++ L KGK +H Y IR  + +D+ + +AL+DMY KCG L +A+ +F  M   
Sbjct: 564 SVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQT 623

Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
           N++TWN++I   G HG+  + + L   M + G     + P+++TFI+L  +C+H G + E
Sbjct: 624 NLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFG-----IAPDDITFISLLTSCNHCGFIEE 678

Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
           G+ LF  M  ++GIEP  +HY  +VDLLGRAG+++DAY  +  +P E D++  W SLL +
Sbjct: 679 GLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRS-IWLSLLCS 737

Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
           CR+H NVE+G++AA  L  +EP   S+YV L N+Y   +L D+A ++R  MKE G++K P
Sbjct: 738 CRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTP 797

Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEG 790
           GCSWIE G+ I  F +GD S  ++ +++  L +L   MRK+G
Sbjct: 798 GCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/559 (29%), Positives = 278/559 (49%), Gaps = 43/559 (7%)

Query: 53  ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
            +  Q+ +A+  Y   +R+ +    F +P++LKA   + +L  GK IH+ ++  G+  S 
Sbjct: 28  VQQGQYVDALQFY---SRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSD 84

Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITE-----KDQVSWNSMIATLCRFGKWDLALEA 167
             +  +L+N Y KCGS   +  KVFD++ E     +D   WNS++    RFG     +  
Sbjct: 85  PYITTSLINFYFKCGS-FGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQ 143

Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDG-LRLGRQVHGNSLR-VGEWNTFIMNALMA 225
           F  M    V P +++L      C  L   DG L   +Q+HG S+R V   + F+ + L+ 
Sbjct: 144 FCRMQLFGVRPDAYSL------CILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIY 197

Query: 226 MYAKLGRVDDAKTLFKSFEDR-DLVSWNTIVSSLSQN---DKFLEAVMFLRQMALRGIKP 281
           MY   GR  DA  LFK  ED+ ++V+WN ++    +N   +  LE  +  +      +K 
Sbjct: 198 MYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKN---ENVKL 254

Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
              S  S L AC   E +  G ++H   ++     ++ +V ++L+ MY  C+ VE    V
Sbjct: 255 VSASFTSTLSACCQGEFVSFGMQVHCDLVKLG-FENDPYVCTSLLTMYSKCKLVEDAENV 313

Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
           FD +S KK  LWNAMI+ Y  N    + L ++ +M +V  + P++ T ++V+ +C    +
Sbjct: 314 FDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQM-KVLQIPPDSLTATNVLSSCCLVGS 372

Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
           +     IH   +K  +  +  +Q+AL+ MYS+ G  + + +IF+ ++ RD V+W +MI+G
Sbjct: 373 YDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISG 432

Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
           +    ++ +AL     M                 TV   KP+S  + +V+  C  L  + 
Sbjct: 433 FCQNRKYMEALEFYNSM-----------------TVYGEKPDSDIMASVVSACTGLKNVN 475

Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
            G  IH  AI++ L  DV V S+LVDMY+K      +  VF  MP++N++ WN II  Y 
Sbjct: 476 LGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYC 535

Query: 582 MHGEGQEVLELLKNMVAEG 600
            +G     + L   M   G
Sbjct: 536 RNGLPDLSISLFSQMTQYG 554


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/687 (35%), Positives = 365/687 (53%), Gaps = 57/687 (8%)

Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL--------------E 266
           NAL+A Y +    D A  LF+    RDL S+N ++S LS   + L               
Sbjct: 52  NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPS 111

Query: 267 AVMF---LRQMALRGIKPDGVSIASVLPACSHLE-------MLDTGKEIHAYALRNDILI 316
            V F   LR     G+  D + +   +P  +H+        +LD G+   A  L +++  
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD 171

Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
            +    +A++  YC    +   R +FD +  + +  W AMI+GY QN     A  LF  M
Sbjct: 172 RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM 231

Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR 436
            E      N  + ++++   +++    D   +     +  +       NA+M  + + G 
Sbjct: 232 PER-----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVA----ACNAMMVGFGQRGM 282

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
           ++ +KT+F+ M  RD  +W+ MI  Y       +AL   REM              L   
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM--------------LWRG 328

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
           V   +PN  +++++L  C AL+ L  G+E+HA  +R     DV   SAL+ MY KCG L+
Sbjct: 329 V---RPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLD 385

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A+RVF     ++++ WN +I  Y  HG G++ L +  +M   G     + P+ +T+I  
Sbjct: 386 KAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAG-----MSPDGITYIGA 440

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             ACS++G V EG ++F  M  +  I P  +HY+C+VDLLGR+G VE+A+ LI  MP E 
Sbjct: 441 LTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEP 500

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVR 736
           D A  W +L+GACR+H+N EI E+AA+ L  LEP  A  YVLLS+IY+S   W+ A  +R
Sbjct: 501 D-AVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMR 559

Query: 737 KKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG-SHQQSEQLHGFLENLSERMRKEGYVPDT 795
           K +    + K PGCSWIE+   +H F +GD  +H +   +   LE L   + + GY  D 
Sbjct: 560 KFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADG 619

Query: 796 SCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKI 855
           S VLH+++EE+K   L  HSE+ A+A+G+L  P G  IRV KNLRVC DCH A K I+KI
Sbjct: 620 SFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKI 679

Query: 856 ESREIILRDVRRFHHFKNGTCSCGDYW 882
            SREI+LRD  RFHHFK+G CSC DYW
Sbjct: 680 TSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 203/483 (42%), Gaps = 72/483 (14%)

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +F R+  +D  S+N++I+ L               +    +  ++  L S+    S +S 
Sbjct: 70  LFRRMPSRDLASYNALISGLS--------------LRRQTLPDAAAALASIPFPPSVVSF 115

Query: 196 RDGLRLGRQVHG---NSLRV----GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
              LR G   HG   +++R+     E N      L+      GRV++A+ LF    DRD+
Sbjct: 116 TSLLR-GYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDV 174

Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI-HA 307
           V+W  ++S   Q  +  EA     +M  R +    VS  +++   +    ++  +++   
Sbjct: 175 VAWTAMLSGYCQAGRITEARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEV 230

Query: 308 YALRNDILIDNSFVG--------------SALVD---MYCNCREVECGRR--------VF 342
              RN++      VG              +A+ +     CN   V  G+R        VF
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
           + + ++    W+AMI  Y QNE+  EAL  F +M    G+ PN  ++ S++  C      
Sbjct: 291 EKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM-LWRGVRPNYPSVISILTVCAALAVL 349

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
                +H   ++     D +  +AL+ MY + G ++ +K +F   E +D V WN+MITGY
Sbjct: 350 DYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGY 409

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
              G    AL +  +M+                 +    P+ IT +  L  C     + +
Sbjct: 410 AQHGLGEQALGIFHDMR-----------------LAGMSPDGITYIGALTACSYTGKVKE 452

Query: 523 GKEI-HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
           G+EI ++  + + +       S +VD+  + G +  A  +   MPV  + + W  ++ A 
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512

Query: 581 GMH 583
            MH
Sbjct: 513 RMH 515



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 14/251 (5%)

Query: 113 VTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
           V   N ++  +G+ G  M D  K VF+++ E+D  +W++MI    +      AL  FR M
Sbjct: 267 VAACNAMMVGFGQRG--MVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKL 230
           L+  V P+  +++S+   C+ L+  D    GR+VH   LR   + + F ++AL+ MY K 
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLD---YGREVHAAMLRCSFDMDVFAVSALITMYIKC 381

Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
           G +D AK +F +FE +D+V WN++++  +Q+    +A+     M L G+ PDG++    L
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGAL 441

Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
            ACS+   +  G+EI      N  +   +   S +VD+      VE     FD I +  +
Sbjct: 442 TACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE---EAFDLIKNMPV 498

Query: 351 ----ALWNAMI 357
                +W A++
Sbjct: 499 EPDAVIWGALM 509



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 26/259 (10%)

Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM--QNME 482
           NA +   +R G IE ++  F+ M +R T S+N ++ GY        AL L R M  +++ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH---AYAIR---NMLA 536
                 +   L    L     ++  +   P   + ++L +G   H   A AIR    M  
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
            + V  + L+      G +N ARR+FD MP R+V+ W  ++  Y   G   E   L   M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
                     K N V++ A+ +  + +G V+    LF  M       P  +  +    L+
Sbjct: 201 ---------PKRNVVSWTAMISGYAQNGEVNLARKLFEVM-------PERNEVSWTAMLV 244

Query: 657 G--RAGKVEDAYQLINMMP 673
           G  +AG VEDA +L N MP
Sbjct: 245 GYIQAGHVEDAAELFNAMP 263



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +++  ++    EA+ ++ EM    ++P+  +  ++L   A +  L  G+++HA +
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAM 359

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           ++  + +    V + L+ MY KCG ++    +VF     KD V WNSMI    + G  + 
Sbjct: 360 LRCSFDMDVFAV-SALITMYIKCG-NLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQ 417

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH-----GNSLRVGEWNTF 218
           AL  F  M  + + P   T +    ACS   +   ++ GR++       +S+R G  +  
Sbjct: 418 ALGIFHDMRLAGMSPDGITYIGALTACSYTGK---VKEGREIFNSMTVNSSIRPGAEHYS 474

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
            M  L+    + G V++A  L K+   + D V W  ++ +
Sbjct: 475 CMVDLL---GRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/685 (34%), Positives = 377/685 (55%), Gaps = 21/685 (3%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            R +HG+ ++ G   + F+M  L+ +Y+K G ++ A  +F +   R++ +W T+++   Q
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N   L A+    +M   G  P   ++  VL ACS L+ ++ GK++HAY ++  I  D S 
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS- 201

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           +G++L   Y   R +E   + F  I +K +  W ++I+    N     +L  F+ M    
Sbjct: 202 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS-D 260

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ PN  T++SV+ AC           IH  +IKLG G    ++N++M +Y + G +  +
Sbjct: 261 GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEA 320

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +F+ ME  + V+WN MI G+         +M L E  ++   K+ +    + + + R 
Sbjct: 321 QKLFEGMETLNLVTWNAMIAGHA-------KMMDLAE-DDVAAHKSGSTALAMFQKLYRS 372

Query: 501 --KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             KP+  T  +VL  C  L AL +G++IH   I++ +  DVVVG+ALV MY KCG ++ A
Sbjct: 373 GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKA 432

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            + F  MP R +I+W  +I  +  HG  Q+ L+L ++M   G     +KPN+VTF+ + +
Sbjct: 433 SKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG-----IKPNQVTFVGVLS 487

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           ACSH+G+  E +  F  M+  Y I+P  DH+AC++D+  R G+VE+A+ +++ M  E ++
Sbjct: 488 ACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNE 547

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
              WS L+  CR H   ++G  AA+ L  L+P     YV L N++ SA  W     VRK 
Sbjct: 548 T-IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 606

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
           MKE  V K    SWI   ++++ F   D SH QS +++  LE +   ++  GY P     
Sbjct: 607 MKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVE 666

Query: 799 LHNVNEEEKETLLCG--HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
           +    E E+  L     HSEKLAIAFG+LN P  T IRV K++ +C DCH   +FIS ++
Sbjct: 667 VIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLK 726

Query: 857 SREIILRDVRRFHHFKNGTCSCGDY 881
            REI++RD ++ H F NG CSCG Y
Sbjct: 727 GREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 165/606 (27%), Positives = 281/606 (46%), Gaps = 87/606 (14%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            + IH H+VK G+    + V   LVN+Y KCG  M   +KVFD +  ++  +W +++   
Sbjct: 83  ARMIHGHIVKTGFH-EDLFVMTFLVNVYSKCGV-MESAHKVFDNLPRRNVNAWTTLLTGY 140

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +     LAL+ F  ML +   PS++TL  V  ACS+L     +  G+QVH   ++   +
Sbjct: 141 VQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL---QSIEFGKQVHAYLIKYHID 197

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++T I N+L + Y+K  R++ A   FK  +++D++SW +++SS   N +   ++ F   M
Sbjct: 198 FDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDM 257

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYC 330
              G+KP+  ++ SVL AC  +  LD G +IH+ +++    + ILI NS     ++ +Y 
Sbjct: 258 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS-----IMYLYL 312

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQ-----------NEYDEEALMLFIKMEEV 379
            C  +   +++F+ +    +  WNAMI G+ +           ++    AL +F K+   
Sbjct: 313 KCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR- 371

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           +G+ P+  T SSV+  C    A    E IHG  IK G+  D  V  AL+ MY++ G I+ 
Sbjct: 372 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 431

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +   F +M  R  +SW +MITG+   G    AL L  +M+                 ++ 
Sbjct: 432 ASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR-----------------LVG 474

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            KPN +T + VL  C            HA             G A   +Y         +
Sbjct: 475 IKPNQVTFVGVLSACS-----------HA-------------GLADEALYY----FELMQ 506

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           + +++ PV +   +  +I  Y   G  +E  +++  M  E        PNE  +  L A 
Sbjct: 507 KQYNIKPVMD--HFACLIDMYLRLGRVEEAFDVVHKMNFE--------PNETIWSMLIAG 556

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSP-DHYACVVDLLGRAGKVEDAYQLINMMPPE-FD 677
           C   G    G   FY  +    ++P   + Y  ++++   AG+ +D  ++  +M  E   
Sbjct: 557 CRSHGKSDLG---FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVG 613

Query: 678 KAGAWS 683
           K   WS
Sbjct: 614 KLKDWS 619



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 234/449 (52%), Gaps = 30/449 (6%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   L    +++    A+  +I+M  +   P N+    VL A + +Q +  GKQ+
Sbjct: 128 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 187

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA+++KY     + ++ N+L + Y K     + + K F  I EKD +SW S+I++ C  G
Sbjct: 188 HAYLIKYHIDFDT-SIGNSLSSFYSKFRRLEFAI-KAFKIIKEKDVISWTSVISSCCDNG 245

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-F 218
           +   +L  F  ML   ++P+ +TL SV  AC  +   D   LG Q+H  S+++G  ++  
Sbjct: 246 QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD---LGAQIHSLSIKLGYGSSIL 302

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS------LSQNDKFLE-----A 267
           I N++M +Y K G + +A+ LF+  E  +LV+WN +++       L+++D         A
Sbjct: 303 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +   +++   G+KPD  + +SVL  CS+L  L+ G++IH   +++ +L D   VG+ALV 
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLAD-VVVGTALVS 421

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++   + F  +  + +  W +MITG+ ++   ++AL LF  M  V G+ PN  
Sbjct: 422 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV-GIKPNQV 480

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN---ALMDMYSRMGRIEISKTIF 444
           T   V+ AC  S A    E ++   +       + V +    L+DMY R+GR+E +  + 
Sbjct: 481 TFVGVLSAC--SHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 538

Query: 445 DDM--EVRDTVSWNTMITGYTICGQHGDA 471
             M  E  +T+ W+ +I G   C  HG +
Sbjct: 539 HKMNFEPNETI-WSMLIAG---CRSHGKS 563



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 22/225 (9%)

Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
           C+      +   IHGH +K G   D +V   L+++YS+ G +E +  +FD++  R+  +W
Sbjct: 74  CIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAW 133

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
            T++TGY    Q+   L+ L+    M E                  P++ TL  VL  C 
Sbjct: 134 TTLLTGYV---QNSHPLLALQLFIKMLEAG--------------AYPSNYTLGIVLNACS 176

Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
           +L ++  GK++HAY I+  +  D  +G++L   Y+K   L FA + F ++  ++VI+W  
Sbjct: 177 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236

Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +I +   +G+    L    +M+++G     +KPNE T  ++ +AC
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDG-----MKPNEYTLTSVLSAC 276



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
           NV D +E  L  +  S     +L  C   +   + + IH + ++     D+ V + LV++
Sbjct: 49  NVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNV 108

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y+KCG +  A +VFD +P RNV  W  ++  Y  +      L+L   M+  G+      P
Sbjct: 109 YSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAY-----P 163

Query: 609 NEVTFIALFAACS 621
           +  T   +  ACS
Sbjct: 164 SNYTLGIVLNACS 176


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/689 (34%), Positives = 398/689 (57%), Gaps = 38/689 (5%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P    + ++LK     Q L+  KQ+HAH++  G  L S+ + + LV  Y  CG  + +
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSG--LLSIDIRSVLVATYAHCGY-VHN 73

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACS 191
             K+FD + ++  + +N MI      G +  A++ F  ML S +  P ++T   V  ACS
Sbjct: 74  ARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACS 133

Query: 192 NLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
            L     +  GR +HG +L  + G  + F++N+L+AMY   G V++A+ +F + +++ +V
Sbjct: 134 ELLL---VEYGRVLHGLTLVSKFGS-HLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVV 189

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           SWNT+++   +N     A++   QM   G++ DG S+ SVLPAC +L+ L+ G+ +H   
Sbjct: 190 SWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-- 247

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           L  + ++    V +ALVDMY  C  ++  R VFD + ++ +  W +MI GY  N   + A
Sbjct: 248 LVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSA 307

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L LF K+ ++ GL PN+ T++ ++ AC       D   +HG  +K  L  +  V+ +L+D
Sbjct: 308 LSLF-KIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLID 366

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY++   + +S ++F     + TV WN +++G        +A+ L ++M           
Sbjct: 367 MYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKM----------- 415

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
              L E V   + N+ T  ++LP  G L+ L     I++Y +R+   +++ V ++L+D+Y
Sbjct: 416 ---LMEGV---EINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIY 469

Query: 550 AKCGCLNFARRVFDLMPV--RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           +KCG L  A ++F+ +PV  +++  W++II  YGMHG G+  + L K MV  G     VK
Sbjct: 470 SKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSG-----VK 524

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PN+VTF ++  +CSH+GMV +G+ LF  M  D+   P+ DHY C+VDLLGRAG++++AY 
Sbjct: 525 PNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYD 584

Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
           LI  MP     A  W +LLGAC +H+NVE+GE+AA+ LF LEP    +YVLL+ +Y++  
Sbjct: 585 LIKTMPFMPGHA-VWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALG 643

Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
            W+ A +VR++M ++G+RK P  S IE G
Sbjct: 644 RWEDAENVRQRMDDIGLRKAPAHSLIEAG 672


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 247/700 (35%), Positives = 377/700 (53%), Gaps = 61/700 (8%)

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
           +T++ N L+ +Y K G +D A   F     +++ SW  ++S+ +QN    EA++  RQM 
Sbjct: 68  DTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLFRQME 127

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHA--YALRNDILIDNSFVGSALVDMYCNCR 333
             G+K + V++A+VL  CS ++ L  G+ IH    A + D++I     G+ALV+MY  C 
Sbjct: 128 REGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKKDVVI-----GNALVNMYSKCG 182

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM--EEVAGLWPNATTMSS 391
            +   R  F  +  + +  W  MIT   ++    EA+ +F +M  E VA   PN  +  +
Sbjct: 183 SLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVA---PNEISCLA 239

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDR--YVQNALMDMYSRMGRIEISKTIFDDME- 448
           V+ AC           IH      GL  D+   V N L+  Y R G    ++ +FD ++ 
Sbjct: 240 VLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQH 299

Query: 449 -VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITL 507
             R+ VSW +MI  YT   Q    + L +EM   EE K               K + +  
Sbjct: 300 SARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESK---------------KMDPVAY 344

Query: 508 MTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
           + VL  C +LSAL  G+++H   +      ++ +  A+V+MY KCG L  AR VFD M  
Sbjct: 345 LCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKA 404

Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
           RN+I WN ++  Y  HG  +  L+L +    +G     V P+E+TF+ +  ACSH+GMV 
Sbjct: 405 RNMIAWNSMMGGYTQHGHPKRALQLFELACLDG-----VLPDEITFVTILTACSHAGMVK 459

Query: 628 EGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP---EFDKAGAWSS 684
            G+  F  ++ D+G+EPS DHY C+VD+LGRAG ++ A +L+  MP      D+   W +
Sbjct: 460 PGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMA 519

Query: 685 LLGACRIHQNVE----IGEIAAQNLFLLE------------PDVASHYVLLSNIYSSAQL 728
           LL +C++H +V+    I  + +     L              + A+  V+LSNIY+ A+ 
Sbjct: 520 LLASCKVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKK 579

Query: 729 WDKAMDVRKKMKE-----MGVRKEPGCSWIEFGDEIHKFLAGD-GSHQQSEQLHGFLENL 782
           W++   VR ++ E     M   ++ GCS+IE    IH+F+AG    H + + +   ++ L
Sbjct: 580 WEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRL 639

Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
            E ++  GYVPDTS V+H+V E EKE +L  HSE++AIAFG++     T +RV  NLR+C
Sbjct: 640 EELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRIC 699

Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
           +DCH A K ISK   REI++RD RRFHHF +G CSC DYW
Sbjct: 700 SDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDYW 739



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 19/413 (4%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + + A++   REA++ + +M R  ++ +     AVL   + I+DL+ G+ IH  V
Sbjct: 102 SWTIVISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRV 161

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +        V + N LVNMY KCGS + +    F  +  +D VSW +MI  L   G+W+ 
Sbjct: 162 IA---AKKDVVIGNALVNMYSKCGS-LREARASFQEMVVRDVVSWTTMITALSEHGEWNE 217

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
           A+E F  M+  NV P+  + ++V  ACSNL  R  +R+  +   +     +    + N L
Sbjct: 218 AVEIFWEMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTL 277

Query: 224 MAMYAKLGRVDDAKTLFKSFED--RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GI 279
           +  Y + G   DA+ +F S +   R+ VSW +++++ + N++    V   ++M  R    
Sbjct: 278 IHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESK 337

Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339
           K D V+   VL ACS L  L  G+++H   +      D   +  A+V+MYC C  +   R
Sbjct: 338 KMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAG-FGDELPLAGAIVNMYCKCGSLVEAR 396

Query: 340 RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            VFD +  + +  WN+M+ GY Q+ + + AL LF ++  + G+ P+  T  +++ AC  S
Sbjct: 397 EVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLF-ELACLDGVLPDEITFVTILTAC--S 453

Query: 400 EAFPDKEGI-HGHAIKLGLGR----DRYVQNALMDMYSRMGRIEISKTIFDDM 447
            A   K G+ H  +I+   G     D YV   ++DM  R G ++ ++ + + M
Sbjct: 454 HAGMVKPGVWHFGSIRADFGMEPSVDHYV--CMVDMLGRAGWLDAAERLVERM 504



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 230/482 (47%), Gaps = 34/482 (7%)

Query: 93  LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
           L+  +++H  ++  G   +   + N LV +YGK G  +   +  FDRI  K+  SW  +I
Sbjct: 50  LAAVEELHCRMIAQGLD-ADTYLGNNLVRVYGKFGG-LDRAWAAFDRIAAKNVFSWTIVI 107

Query: 153 ATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
           +   + G    AL  FR M    V+ +  TL +V   CS++    G   GR +HG  +  
Sbjct: 108 SAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAG---GRSIHGRVI-A 163

Query: 213 GEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
            + +  I NAL+ MY+K G + +A+  F+    RD+VSW T++++LS++ ++ EAV    
Sbjct: 164 AKKDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFW 223

Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCN 331
           +M    + P+ +S  +VL ACS+L      + IH +     + +D    V + L+  Y  
Sbjct: 224 EMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGR 283

Query: 332 CREVECGRRVFDFI--SDKKIALWNAMITGYGQNEYDEEALMLF---IKMEEVAGLWPNA 386
           C      RRVFD +  S +    W +MI  Y  NE  +  + L+   I+ EE   + P A
Sbjct: 284 CGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVA 343

Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
                V+ AC    A      +H   +  G G +  +  A+++MY + G +  ++ +FD 
Sbjct: 344 YL--CVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDG 401

Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
           M+ R+ ++WN+M+ GYT  G    AL L               +  LD  +    P+ IT
Sbjct: 402 MKARNMIAWNSMMGGYTQHGHPKRALQLF-------------ELACLDGVL----PDEIT 444

Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS--ALVDMYAKCGCLNFARRVFDL 564
            +T+L  C + + + K    H  +IR     +  V     +VDM  + G L+ A R+ + 
Sbjct: 445 FVTILTAC-SHAGMVKPGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVER 503

Query: 565 MP 566
           MP
Sbjct: 504 MP 505



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 150/297 (50%), Gaps = 31/297 (10%)

Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
           E +H   I  GL  D Y+ N L+ +Y + G ++ +   FD +  ++  SW  +I+ +   
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
           G H +AL+L R+M+       R  V          K N +TL  VL  C ++  LA G+ 
Sbjct: 114 GHHREALVLFRQME-------REGV----------KANEVTLAAVLGICSSIKDLAGGRS 156

Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
           IH   I      DVV+G+ALV+MY+KCG L  AR  F  M VR+V++W  +I A   HGE
Sbjct: 157 IHGRVI--AAKKDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGE 214

Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
             E +E+   MV+E      V PNE++ +A+  ACS+ G  S+ + + ++     G+E  
Sbjct: 215 WNEAVEIFWEMVSE-----NVAPNEISCLAVLGACSNLGDRSQ-VRVIHEFIASGGLE-- 266

Query: 646 PDHYACVVDLL----GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
            D    V + L    GR G   DA ++ + +      A +W+S++ A   ++  + G
Sbjct: 267 LDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAG 323



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
           LA  +E+H   I   L  D  +G+ LV +Y K G L+ A   FD +  +NV +W ++I A
Sbjct: 50  LAAVEELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISA 109

Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           +  +G  +E L L + M  EG     VK NEVT  A+   CS
Sbjct: 110 FAQNGHHREALVLFRQMEREG-----VKANEVTLAAVLGICS 146


>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 336/595 (56%), Gaps = 57/595 (9%)

Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
           G+ P  + +     +C+  + L  G++IH+   R   L  N FV  + + MY  C   + 
Sbjct: 7   GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLG-LDGNVFVAHSAISMYARCGRPDD 65

Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
             ++F+ +  + +  WNAMI+G+        A+ +F ++  +    P+A TM+S++P+  
Sbjct: 66  AYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS-- 123

Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
                              +G+ R    AL+            K +FD+M  +  +SWN 
Sbjct: 124 -------------------MGKARVEDIALL------------KGVFDEMRFKGLISWNA 152

Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
           M+  YT    H +A+ L   MQ       ++ +          +P+++TL TVLP CG +
Sbjct: 153 MLAVYTNNEMHVEAVELFMRMQ-------KDGI----------EPDAVTLATVLPSCGEV 195

Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
           SAL+ GK IH    R  + + +++ +AL+DMYA CGCL  AR VFD M  R+V++W  II
Sbjct: 196 SALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSII 255

Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
            AYG HG G+E ++L + M  +G     ++P+ + F+A+ AACSH+G++  G   FY M 
Sbjct: 256 SAYGRHGHGREAIDLFEKMCGQG-----LEPDSIAFVAILAACSHAGLLDMGKHYFYSMT 310

Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
            ++ I P  +HYAC+VDLLGRAG + +AY  I +MP + ++   W +LLGACRIH N++I
Sbjct: 311 SEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNER-VWGALLGACRIHSNMDI 369

Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
           G +AA +L  L P    +YVLLSNIY+ A  W     VR  M+  G++K PG S  E GD
Sbjct: 370 GLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGD 429

Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
            +H F  GD SH QS+ ++  L  L  R+R+ GY P+    LH+V EE+KE  L  HSEK
Sbjct: 430 RVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEK 489

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFK 872
           LAIAF ++NT PGT IR+  NLR C+DCH A K IS I  REIIL+DV R H+ K
Sbjct: 490 LAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 44/325 (13%)

Query: 75  PDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVY 134
           P     P   K+ A    L LG+QIH+   + G    +V VA++ ++MY +CG    D Y
Sbjct: 10  PGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLD-GNVFVAHSAISMYARCGRPD-DAY 67

Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
           ++F+ +  +D VSWN+MI+     G +  A++ FR +              VAL C    
Sbjct: 68  QMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFREL--------------VALQCP--- 110

Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDA---KTLFKSFEDRDLVSW 251
                              + +   M +++    K  RV+D    K +F     + L+SW
Sbjct: 111 -------------------KPDAGTMASILPSMGK-ARVEDIALLKGVFDEMRFKGLISW 150

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
           N +++  + N+  +EAV    +M   GI+PD V++A+VLP+C  +  L  GK IH   ++
Sbjct: 151 NAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE-VIK 209

Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
              +  +  + +AL+DMY NC  ++  R VFD +  + +  W ++I+ YG++ +  EA+ 
Sbjct: 210 RRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAID 269

Query: 372 LFIKMEEVAGLWPNATTMSSVVPAC 396
           LF KM    GL P++    +++ AC
Sbjct: 270 LFEKMCG-QGLEPDSIAFVAILAAC 293



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 13/250 (5%)

Query: 114 TVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY 173
           T+A+ L +M      D+  +  VFD +  K  +SWN+M+A          A+E F  M  
Sbjct: 116 TMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQK 175

Query: 174 SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIM-NALMAMYAKLGR 232
             +EP + TL +V  +C  +S    L LG+++H    R    ++ ++ NALM MYA  G 
Sbjct: 176 DGIEPDAVTLATVLPSCGEVS---ALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 232

Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
           + +A+ +F S   RD+VSW +I+S+  ++    EA+    +M  +G++PD ++  ++L A
Sbjct: 233 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 292

Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVGSA-LVDMYCNCREVECGRRVFDFISDKKIA 351
           CSH  +LD GK  + Y++ ++  I       A +VD+        C R  +DFI    I 
Sbjct: 293 CSHAGLLDMGKH-YFYSMTSEFHIAPKLEHYACMVDLLG---RAGCIREAYDFIMVMPIK 348

Query: 352 ----LWNAMI 357
               +W A++
Sbjct: 349 PNERVWGALL 358



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 16  LSSLQTHQPPATTATSLPLPGSQTRCKE-----------------SWIESLRSEARSNQF 58
           L +LQ  +P A T  S+     + R ++                 SW   L     +   
Sbjct: 104 LVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMH 163

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
            EA+  ++ M +  I+PD      VL +   +  LSLGK+IH  V+K     SS+ + N 
Sbjct: 164 VEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIH-EVIKRRRMCSSMLLENA 222

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
           L++MY  CG  + +   VFD +  +D VSW S+I+   R G    A++ F  M    +EP
Sbjct: 223 LMDMYANCGC-LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEP 281

Query: 179 SSFTLVSVALACSN 192
            S   V++  ACS+
Sbjct: 282 DSIAFVAILAACSH 295


>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/638 (37%), Positives = 360/638 (56%), Gaps = 37/638 (5%)

Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           N+ + SLS++ K  EA+  +     +     PD  + A  L +C   + L+ G+ ++   
Sbjct: 34  NSTLKSLSKSGKLDEALRLIESWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 93

Query: 310 LR-----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS---DKKIALWNAMITGYG 361
           L      N  L++N  +   L+ ++  C  V+  RRVF+      D   ++W AM  GY 
Sbjct: 94  LLYRDRCNHNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYS 153

Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
           +N Y +EAL+L+ +M    G   N    S  + AC           +H   +K     D+
Sbjct: 154 RNGYPKEALLLYYEMVCQFGQLGN-FAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQ 212

Query: 422 YVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNM 481
            V NAL+ +YS  G  E +  +FD M  R+ VSWN++I G        +A+   R MQ  
Sbjct: 213 VVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQG- 271

Query: 482 EEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVV 541
              K     +             +TL T+LP C  ++AL  GKEIHA  +++    D  V
Sbjct: 272 ---KGMGFSW-------------VTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPV 315

Query: 542 GSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGS 601
            ++LVDMYAKCG +++ RRVF+ M  +++ +WN +I  Y ++G   E +E  + M+  G 
Sbjct: 316 LNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSG- 374

Query: 602 RGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGK 661
                 P+ +TFIAL + CSH+G+  +G  LF  MK D+GI P+ +HYAC+VD+LGRAG+
Sbjct: 375 ----FSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGR 430

Query: 662 VEDAYQLINMMPPEFDKAGA-WSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
           +++A +++  MP  F   G+ W SLL +CR+H NV + E  A+ LF LEP+ A +YV+LS
Sbjct: 431 IKEALEIVKNMP--FKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLS 488

Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSH-QQSEQLHGFL 779
           NIY++A +W+    VR+ M++ G+ KE GCSW++   +IH F+AG  +  + S +     
Sbjct: 489 NIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 548

Query: 780 ENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 839
           + L E M + GYVPDT  VLH+V+EE +   +CGHSE+LA  F ++NT  G  IR+ KNL
Sbjct: 549 KRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNL 608

Query: 840 RVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
           RVC DCH   K +SK+  R I+LRD  RFHHFK+G CS
Sbjct: 609 RVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 25/470 (5%)

Query: 15  PLSSLQTHQPPAT--TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSD 72
           P  SL T+   +T  TATS P    + R   S ++SL    + ++    I S+   + + 
Sbjct: 4   PAISLSTNLTVSTNITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIESWPSKSPA- 62

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG-----LSSVTVANTLVNMYGKCG 127
             PD  A    L +    + L  G++++  ++ Y        L++ T+   L+ ++  CG
Sbjct: 63  TAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSVCG 122

Query: 128 SDMWDVYKVFDRITEK---DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
             + +  +VF+   E     +  W +M     R G    AL  +  M+    +  +F   
Sbjct: 123 R-VDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFS 181

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSF 243
               ACS+L     LR GR VH   L+  E  +  + NAL+ +Y++ G  ++A  +F   
Sbjct: 182 MALKACSDLG---DLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGM 238

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
             R+LVSWN++++ L + +   EA+   R M  +G+    V++ ++LP C+ +  L +GK
Sbjct: 239 PHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGK 298

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           EIHA  +++    D   + S LVDMY  C  ++  RRVF+ +  K +  WN +ITGY  N
Sbjct: 299 EIHAVIVKSTAKPDAPVLNS-LVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 357

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
               EA+  F +M   +G  P+  T  +++  C  +    D   +    +K+  G    V
Sbjct: 358 GRMTEAMESFQEM-ICSGFSPDGITFIALLSGCSHAGLADDGCRLF-EMMKMDHGISPTV 415

Query: 424 QN--ALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGD 470
           ++   L+D+  R GRI+ +  I  +M  + T S W +++     C  HG+
Sbjct: 416 EHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNS---CRLHGN 462



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 23/37 (62%)

Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
           LA  F ++NT  G  IR+ KNL VC DCH   K +SK
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSK 736


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/746 (33%), Positives = 418/746 (56%), Gaps = 32/746 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   L+S   +  ++EAI  Y +M    IQ +++ FP+VL+A +G  DL +G+++H  ++
Sbjct: 67  WGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRII 126

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+ +  V V   L+++YG+ G  +    KVF  +  +D VSW+S+I+++   G+ +  
Sbjct: 127 KSGFDMDPV-VNTALLSVYGELGY-LDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L+AFR M+     P S  +++V  AC  L     LRL +  HG  L+ G E + F+ ++L
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGV---LRLAKSAHGYILKRGIENDRFVDSSL 241

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +  A+ +F++   R   +W  ++SS +      EA+     M    ++P+ 
Sbjct: 242 IFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNS 301

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++  +L +C++L +L  GK +H   ++ND+  +   +G  L+++Y    + +   ++  
Sbjct: 302 VTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILH 361

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I  + IA+WN +I+ Y Q    +E + LF++M++  G  P++ +++S + A        
Sbjct: 362 EIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQK-QGFMPDSFSLASSLSASGNEGELQ 420

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHGH IK     D YV N+L++MYS+ G ++++  IFD ME +  V+WN+MI+G +
Sbjct: 421 LGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G    A+ L   M                  V  P+   +  ++V+  C  L  L KG
Sbjct: 480 QNGYSTKAISLFDLMY-----------------VTCPEIGEVAFVSVIQACSHLGFLEKG 522

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K IH   I   +   + + +ALVDMYAKCG L  A+RVFD M  R+V++W+ +I +YG+H
Sbjct: 523 KWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVH 582

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G+  EV+ L   M+  G     +KPN+VT + + +ACSH+G V EGM LF+    D+GIE
Sbjct: 583 GQISEVIFLFSKMLESG-----IKPNDVTVMNVLSACSHAGCVKEGM-LFFNSMRDFGIE 636

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P  +H+ C+VDLL RAG +++AY++I +MP     A  W +LL  CRIHQ ++I +   +
Sbjct: 637 PKREHFVCIVDLLSRAGDLDEAYEIIKLMPFP-PGASIWGALLNGCRIHQRMDIAKNIQR 695

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            L+ ++ D   HY LLSNIY++   W++  +VR  MK  G++K P  S +E G + ++F 
Sbjct: 696 ELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFG 755

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKE 789
           AGD S+ Q +  +    N     R+E
Sbjct: 756 AGDASYPQLKYTYSTFNNAQRSSREE 781



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 176/674 (26%), Positives = 317/674 (47%), Gaps = 45/674 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           +  + KA   ++ L+   Q+HAH++        +  +  L+  Y + G D+     VF  
Sbjct: 4   YMPLFKASTTLRTLA---QLHAHIIVTALHNDPLP-STKLIESYSQLG-DLQSSTSVFRT 58

Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
               D   W  ++ +    G +  A+  +  ML   ++ +S+T  SV  ACS       L
Sbjct: 59  FHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGD---L 115

Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
            +G++VHG  ++ G + +  +  AL+++Y +LG +D A+ +F     RDLVSW++I+SS+
Sbjct: 116 GVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSV 175

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
            +N +  E +   R M   G  PD V + +V+ AC  L +L   K  H Y L+  I  D 
Sbjct: 176 VENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDR 235

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
            FV S+L+ MY  C  +     VF+ ++ +  + W AMI+ Y    Y +EAL LF+ M++
Sbjct: 236 -FVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQK 294

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD-RYVQNALMDMYSRMGRI 437
              + PN+ TM  ++ +C       + + +H   IK  L  +   +   L+++Y+   + 
Sbjct: 295 TE-VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKH 353

Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV 497
           ++ + I  ++  R    WNT+I+ Y   G       LL+E  ++     +          
Sbjct: 354 DLCEKILHEIGGRGIAVWNTLISVYAQKG-------LLKETVDLFVRMQKQGF------- 399

Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
               P+S +L + L   G    L  G +IH + I+     + V  S L++MY+KCG ++ 
Sbjct: 400 ---MPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNS-LINMYSKCGYVDL 455

Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
           A  +FD M  + V+TWN +I     +G   + + L   M       G     EV F+++ 
Sbjct: 456 AYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIG-----EVAFVSVI 510

Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
            ACSH G + +G  + +K+    G+         +VD+  + G ++ A ++ + M     
Sbjct: 511 QACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSER-- 567

Query: 678 KAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS---AQLWDKAMD 734
              +WSSL+ +  +H   +I E+      +LE  +  + V + N+ S+   A    + M 
Sbjct: 568 SVVSWSSLISSYGVHG--QISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGML 625

Query: 735 VRKKMKEMGVRKEP 748
               M++ G+  EP
Sbjct: 626 FFNSMRDFGI--EP 637



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 223/449 (49%), Gaps = 13/449 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   + S       +EA+  ++ M +++++P++     +L++   +  L  GK +
Sbjct: 264 RSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSV 323

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           H  V+K     +   +  TL+ +Y      D+ +  K+   I  +    WN++I+   + 
Sbjct: 324 HCVVIKNDLDANLDCLGPTLLELYAATAKHDLCE--KILHEIGGRGIAVWNTLISVYAQK 381

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G     ++ F  M      P SF+L S   A  N      L+LG Q+HG+ ++    + +
Sbjct: 382 GLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN---EGELQLGLQIHGHVIKRPFMDEY 438

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + N+L+ MY+K G VD A  +F   E + +V+WN+++S LSQN    +A+     M +  
Sbjct: 439 VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTC 498

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            +   V+  SV+ ACSHL  L+ GK IH + L    +    F+ +ALVDMY  C +++  
Sbjct: 499 PEIGEVAFVSVIQACSHLGFLEKGKWIH-HKLITCGVRKCIFIETALVDMYAKCGDLQTA 557

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +RVFD +S++ +  W+++I+ YG +    E + LF KM E +G+ PN  T+ +V+ AC  
Sbjct: 558 QRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLE-SGIKPNDVTVMNVLSAC-- 614

Query: 399 SEAFPDKEGI--HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
           S A   KEG+         G+   R     ++D+ SR G ++ +  I   M      S W
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEE 484
             ++ G  I  +   A  + RE+ N++ +
Sbjct: 675 GALLNGCRIHQRMDIAKNIQRELWNIQTD 703



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 138/569 (24%), Positives = 261/569 (45%), Gaps = 46/569 (8%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+  Y++LG +  + ++F++F   D   W  ++ S   N  + EA+    QM  + I+ +
Sbjct: 39  LIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQAN 98

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SVL ACS    L  G+ +H   +++   +D   V +AL+ +Y     ++  R+VF
Sbjct: 99  SYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMD-PVVNTALLSVYGELGYLDSARKVF 157

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  W+++I+   +N    E L  F  M    G  P++  + +VV AC      
Sbjct: 158 GEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGT-PDSVLVLTVVEACGELGVL 216

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              +  HG+ +K G+  DR+V ++L+ MY++ G +  ++ +F+++  R T +W  MI+ Y
Sbjct: 217 RLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSY 276

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            + G   +AL L   MQ  E E                 PNS+T+  +L  C  LS L +
Sbjct: 277 NLGGYLKEALALFVSMQKTEVE-----------------PNSVTMRIILRSCTNLSLLRE 319

Query: 523 GKEIHAYAIRNMLATDV-VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           GK +H   I+N L  ++  +G  L+++YA     +   ++   +  R +  WN +I  Y 
Sbjct: 320 GKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYA 379

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G  +E ++L   M  +G       P+  +  +  +A  + G +  G+ +   +     
Sbjct: 380 QKGLLKETVDLFVRMQKQG-----FMPDSFSLASSLSASGNEGELQLGLQIHGHVIK--- 431

Query: 642 IEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN-VEIG 698
             P  D Y    ++++  + G V+ AY + + M P+      W+S++    + QN     
Sbjct: 432 -RPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPK--GVVTWNSMISG--LSQNGYSTK 486

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQL--WDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
            I+  +L  +          +S I + + L   +K   +  K+   GVRK   C +IE  
Sbjct: 487 AISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK---CIFIE-- 541

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSER 785
             +    A  G  Q ++++    +N+SER
Sbjct: 542 TALVDMYAKCGDLQTAQRV---FDNMSER 567


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/724 (34%), Positives = 389/724 (53%), Gaps = 32/724 (4%)

Query: 73  IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD 132
           + P N +    L      + L  G+ +HA ++K     S + +AN+L+N Y KC   +  
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKC-CHLPK 61

Query: 133 VYKVFDRITEKDQVSWNSMIATLCRFGKW--DLALEAFRMMLYSNVEPSSFTLVSVALAC 190
              VFDRI  KD +SWN +I    + G       +E F+ M   N+ P++ T   +  A 
Sbjct: 62  AKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAA 121

Query: 191 SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
           SNLS    +  G+Q H  ++++   ++ F+ ++L+ MY K G + +A+ +F    +R+ V
Sbjct: 122 SNLS---SIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEV 178

Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
           +W T++S  +      EA      M       +  +  SVL A +  E +D+GK+IH  A
Sbjct: 179 TWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLA 238

Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
           ++  +L+  S + +ALV MY  C  ++   +VF+  +DK    W+AMITGY Q+    +A
Sbjct: 239 VKTGLLVFLSIL-NALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKA 297

Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
           L LF +M   AG+ P+  T+  V+ AC  + A  + + +H + +KLG     Y+  AL+D
Sbjct: 298 LKLFSRMH-FAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVD 356

Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
           MY++ G  E ++  F+ ++  D V W +MI GY   G++ DAL L   MQ          
Sbjct: 357 MYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQM--------- 407

Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
                E +L   PN +T+ +VL  C  L+A  +G++IHA  I+  L  +V +GSAL  MY
Sbjct: 408 -----EGIL---PNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMY 459

Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
           AKCG L     VF  MP R++I+WN +I     +G G+E LEL + M     R  + KP+
Sbjct: 460 AKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEM-----RQQDTKPD 514

Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
           +VTF+ + +ACSH G+V  G   F  M D++G+ P  +HYAC+VD+L RAGK+ +A + I
Sbjct: 515 DVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFI 574

Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
                +      W  LLGACR ++N E+G  A + L  L    +S YVLLS IY++    
Sbjct: 575 ESTTIDHGLC-LWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRP 633

Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
           +    VR  MK  GV KEPGCSWIE    +H F+ GD  H    ++   +  LS++M+ E
Sbjct: 634 EDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDE 693

Query: 790 GYVP 793
           GY P
Sbjct: 694 GYQP 697



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 235/460 (51%), Gaps = 25/460 (5%)

Query: 65  YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYG 124
           +  M   +I P+   F  +  A + +  +  G+Q HA  +K       V V ++L+NMY 
Sbjct: 99  FQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMA-CFYDVFVGSSLLNMYC 157

Query: 125 KCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLV 184
           K G  +++  +VFDR+ E+++V+W +MI+          A E F +M     + + F   
Sbjct: 158 KAGL-LFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFT 216

Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKTLFKSF 243
           SV    S L+  + +  G+Q+H  +++ G      I+NAL+ MYAK G +DD+  +F+  
Sbjct: 217 SV---LSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMS 273

Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK 303
            D++ ++W+ +++  +Q+    +A+    +M   GI P   ++  VL ACS    ++ GK
Sbjct: 274 NDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGK 333

Query: 304 EIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQN 363
           ++H Y L+        ++ +ALVDMY      E  R+ F+++    + LW +MI GY QN
Sbjct: 334 QVHNYLLKLG-FESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQN 392

Query: 364 EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYV 423
             +E+AL L+ +M ++ G+ PN  TM+SV+ AC    AF     IH   IK GLG +  +
Sbjct: 393 GENEDALSLYCRM-QMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTI 451

Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
            +AL  MY++ G +E    +F  M  RD +SWN MI+G +  G   +AL L  EM+  + 
Sbjct: 452 GSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQD- 510

Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
                            KP+ +T + VL  C  +  +  G
Sbjct: 511 ----------------TKPDDVTFVNVLSACSHMGLVDSG 534



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 200/358 (55%), Gaps = 8/358 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R + +W   +   A      EA   +  M R +   + FAF +VL A+A  + +  GKQI
Sbjct: 175 RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQI 234

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           H   VK G  L  +++ N LV MY KCGS + D  +VF+   +K+ ++W++MI    + G
Sbjct: 235 HCLAVKTGL-LVFLSILNALVTMYAKCGS-LDDSLQVFEMSNDKNSITWSAMITGYAQSG 292

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
               AL+ F  M ++ + PS FTLV V  ACS+      +  G+QVH   L++G E   +
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDAC---AVEEGKQVHNYLLKLGFESQLY 349

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           IM AL+ MYAK G  +DA+  F   +  DLV W ++++   QN +  +A+    +M + G
Sbjct: 350 IMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEG 409

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           I P+ +++ASVL ACS+L   D G++IHA  ++  + ++ + +GSAL  MY  C  +E G
Sbjct: 410 ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVT-IGSALSTMYAKCGNLEEG 468

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
             VF  + ++ I  WNAMI+G  QN Y +EAL LF +M +     P+  T  +V+ AC
Sbjct: 469 NIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQ-QDTKPDDVTFVNVLSAC 525



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   +   A+S    +A+  +  M  + I P  F    VL A +    +  GKQ+H ++
Sbjct: 280 TWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYL 339

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +K G+  S + +   LV+MY K G    D  K F+ + + D V W SMIA   + G+ + 
Sbjct: 340 LKLGFE-SQLYIMTALVDMYAKSGVTE-DARKGFNYLQQPDLVLWTSMIAGYVQNGENED 397

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
           AL  +  M    + P+  T+ SV  ACSNL+  D    GRQ+H  +++ G      I +A
Sbjct: 398 ALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQ---GRQIHARTIKYGLGLEVTIGSA 454

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L  MYAK G +++   +F+   +RD++SWN ++S LSQN    EA+    +M  +  KPD
Sbjct: 455 LSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPD 514

Query: 283 GVSIASVLPACSHLEMLDTG 302
            V+  +VL ACSH+ ++D+G
Sbjct: 515 DVTFVNVLSACSHMGLVDSG 534


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/685 (34%), Positives = 377/685 (55%), Gaps = 21/685 (3%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            R +HG+ ++ G   + F+M  L+ +Y+K G ++ A  +F +   R++ +W T+++   Q
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           N   L A+    +M   G  P   ++  VL ACS L+ ++ GK++HAY ++  I  D S 
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS- 195

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           +G++L   Y   R +E   + F  I +K +  W ++I+    N     +L  F+ M    
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS-D 254

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
           G+ PN  T++SV+ AC           IH  +IKLG G    ++N++M +Y + G +  +
Sbjct: 255 GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEA 314

Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
           + +F+ ME  + V+WN MI G+         +M L E  ++   K+ +    + + + R 
Sbjct: 315 QKLFEGMETLNLVTWNAMIAGHA-------KMMDLAE-DDVAAHKSGSTALAMFQKLYRS 366

Query: 501 --KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
             KP+  T  +VL  C  L AL +G++IH   I++ +  DVVVG+ALV MY KCG ++ A
Sbjct: 367 GMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKA 426

Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
            + F  MP R +I+W  +I  +  HG  Q+ L+L ++M   G     +KPN+VTF+ + +
Sbjct: 427 SKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG-----IKPNQVTFVGVLS 481

Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
           ACSH+G+  E +  F  M+  Y I+P  DH+AC++D+  R G+VE+A+ +++ M  E ++
Sbjct: 482 ACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNE 541

Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKK 738
              WS L+  CR H   ++G  AA+ L  L+P     YV L N++ SA  W     VRK 
Sbjct: 542 T-IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKL 600

Query: 739 MKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCV 798
           MKE  V K    SWI   ++++ F   D SH QS +++  LE +   ++  GY P     
Sbjct: 601 MKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVE 660

Query: 799 LHNVNEEEKETLLCG--HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIE 856
           +    E E+  L     HSEKLAIAFG+LN P  T IRV K++ +C DCH   +FIS ++
Sbjct: 661 VIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLK 720

Query: 857 SREIILRDVRRFHHFKNGTCSCGDY 881
            REI++RD ++ H F NG CSCG Y
Sbjct: 721 GREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 165/606 (27%), Positives = 281/606 (46%), Gaps = 87/606 (14%)

Query: 96  GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
            + IH H+VK G+    + V   LVN+Y KCG  M   +KVFD +  ++  +W +++   
Sbjct: 77  ARMIHGHIVKTGFH-EDLFVMTFLVNVYSKCGV-MESAHKVFDNLPRRNVNAWTTLLTGY 134

Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
            +     LAL+ F  ML +   PS++TL  V  ACS+L     +  G+QVH   ++   +
Sbjct: 135 VQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL---QSIEFGKQVHAYLIKYHID 191

Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
           ++T I N+L + Y+K  R++ A   FK  +++D++SW +++SS   N +   ++ F   M
Sbjct: 192 FDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDM 251

Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYC 330
              G+KP+  ++ SVL AC  +  LD G +IH+ +++    + ILI NS     ++ +Y 
Sbjct: 252 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS-----IMYLYL 306

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQ-----------NEYDEEALMLFIKMEEV 379
            C  +   +++F+ +    +  WNAMI G+ +           ++    AL +F K+   
Sbjct: 307 KCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR- 365

Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
           +G+ P+  T SSV+  C    A    E IHG  IK G+  D  V  AL+ MY++ G I+ 
Sbjct: 366 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 425

Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
           +   F +M  R  +SW +MITG+   G    AL L  +M+                 ++ 
Sbjct: 426 ASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR-----------------LVG 468

Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
            KPN +T + VL  C            HA             G A   +Y         +
Sbjct: 469 IKPNQVTFVGVLSACS-----------HA-------------GLADEALYY----FELMQ 500

Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
           + +++ PV +   +  +I  Y   G  +E  +++  M  E        PNE  +  L A 
Sbjct: 501 KQYNIKPVMD--HFACLIDMYLRLGRVEEAFDVVHKMNFE--------PNETIWSMLIAG 550

Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSP-DHYACVVDLLGRAGKVEDAYQLINMMPPE-FD 677
           C   G    G   FY  +    ++P   + Y  ++++   AG+ +D  ++  +M  E   
Sbjct: 551 CRSHGKSDLG---FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVG 607

Query: 678 KAGAWS 683
           K   WS
Sbjct: 608 KLKDWS 613



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 234/449 (52%), Gaps = 30/449 (6%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   L    +++    A+  +I+M  +   P N+    VL A + +Q +  GKQ+
Sbjct: 122 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 181

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
           HA+++KY     + ++ N+L + Y K     + + K F  I EKD +SW S+I++ C  G
Sbjct: 182 HAYLIKYHIDFDT-SIGNSLSSFYSKFRRLEFAI-KAFKIIKEKDVISWTSVISSCCDNG 239

Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-F 218
           +   +L  F  ML   ++P+ +TL SV  AC  +   D   LG Q+H  S+++G  ++  
Sbjct: 240 QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD---LGAQIHSLSIKLGYGSSIL 296

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS------LSQNDKFLE-----A 267
           I N++M +Y K G + +A+ LF+  E  +LV+WN +++       L+++D         A
Sbjct: 297 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356

Query: 268 VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVD 327
           +   +++   G+KPD  + +SVL  CS+L  L+ G++IH   +++ +L D   VG+ALV 
Sbjct: 357 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLAD-VVVGTALVS 415

Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
           MY  C  ++   + F  +  + +  W +MITG+ ++   ++AL LF  M  V G+ PN  
Sbjct: 416 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV-GIKPNQV 474

Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN---ALMDMYSRMGRIEISKTIF 444
           T   V+ AC  S A    E ++   +       + V +    L+DMY R+GR+E +  + 
Sbjct: 475 TFVGVLSAC--SHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 532

Query: 445 DDM--EVRDTVSWNTMITGYTICGQHGDA 471
             M  E  +T+ W+ +I G   C  HG +
Sbjct: 533 HKMNFEPNETI-WSMLIAG---CRSHGKS 557



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 22/229 (9%)

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           ++  C+      +   IHGH +K G   D +V   L+++YS+ G +E +  +FD++  R+
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
             +W T++TGY    Q+   L+ L+    M E                  P++ TL  VL
Sbjct: 124 VNAWTTLLTGYV---QNSHPLLALQLFIKMLEAG--------------AYPSNYTLGIVL 166

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C +L ++  GK++HAY I+  +  D  +G++L   Y+K   L FA + F ++  ++VI
Sbjct: 167 NACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVI 226

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
           +W  +I +   +G+    L    +M+++G     +KPNE T  ++ +AC
Sbjct: 227 SWTSVISSCCDNGQAARSLSFFMDMLSDG-----MKPNEYTLTSVLSAC 270



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)

Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
           NV D +E  L  +  S     +L  C   +   + + IH + ++     D+ V + LV++
Sbjct: 43  NVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNV 102

Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
           Y+KCG +  A +VFD +P RNV  W  ++  Y  +      L+L   M+  G+      P
Sbjct: 103 YSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAY-----P 157

Query: 609 NEVTFIALFAACS 621
           +  T   +  ACS
Sbjct: 158 SNYTLGIVLNACS 170


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 336/595 (56%), Gaps = 54/595 (9%)

Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
           L +CS +  L   K+ H+  +R  +  DN  +G                 RV  F +  K
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMG-----------------RVIKFCAISK 66

Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH 409
                   +GY + +     + ++ +M   + + PN  T   ++ AC    A  + + IH
Sbjct: 67  --------SGYLRWQLARNCIFMYSRMLHKS-VSPNKFTYPPLIRACCIDYAIEEGKQIH 117

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD--TVSWNTMITGYTICGQ 467
            H +K G G D +  N L+ MY     +E ++ +FD+M  RD  +VSWN MI  Y    +
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNR 177

Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
             +A  L   M+             L+  VL    +     ++L  C  L AL +GK IH
Sbjct: 178 LHEAFALFDRMR-------------LENVVL----DKFVAASMLSACTGLGALEQGKWIH 220

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            Y  ++ +  D  + + ++DMY KCGCL  A  VF+ +P + + +WN +I    MHG+G+
Sbjct: 221 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 280

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
             +EL K M  E      V P+ +TF+ + +AC+HSG+V EG   F  M +  G++P  +
Sbjct: 281 AAIELFKEMERE-----MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGME 335

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           H+ C+VDLLGRAG +E+A +LIN MP   D AG   +L+GACRIH N E+GE   + +  
Sbjct: 336 HFGCMVDLLGRAGLLEEARKLINEMPVNPD-AGVLGALVGACRIHGNTELGEQIGKKVIE 394

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP  +  YVLL+N+Y+SA  W+    VRK M + GV+K PG S IE    + +F+AG  
Sbjct: 395 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGR 454

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           +H Q+++++  L+ + E +R  GYVPDT  VLH+++EEEKE  L  HSEKLAIAFG+L T
Sbjct: 455 AHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKT 514

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            PG T+R++KNLR+C DCHQA+K ISK+  REII+RD  RFHHF+ G CSC DYW
Sbjct: 515 KPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 8/253 (3%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           R  I  Y  M    + P+ F +P +++A      +  GKQIHAHV+K+G+G    ++ N 
Sbjct: 76  RNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSL-NN 134

Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           L++MY    S +    +VFD + ++D+  VSWN+MIA   +  +   A   F  M   NV
Sbjct: 135 LIHMYVNFQS-LEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 193

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDD 235
               F   S+  AC+ L     L  G+ +HG   + G E ++ +   ++ MY K G ++ 
Sbjct: 194 VLDKFVAASMLSACTGLG---ALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 250

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F     + + SWN ++  L+ + K   A+   ++M    + PDG++  +VL AC+H
Sbjct: 251 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 310

Query: 296 LEMLDTGKEIHAY 308
             +++ GK    Y
Sbjct: 311 SGLVEEGKHYFQY 323



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 155/318 (48%), Gaps = 14/318 (4%)

Query: 160 KWDLALEAFRM---MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EW 215
           +W LA     M   ML+ +V P+ FT   +  AC        +  G+Q+H + L+ G   
Sbjct: 71  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC---IDYAIEEGKQIHAHVLKFGFGA 127

Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSF--EDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
           + F +N L+ MY     ++ A+ +F +    DR+ VSWN ++++  Q+++  EA     +
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187

Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
           M L  +  D    AS+L AC+ L  L+ GK IH Y  ++ I +D S + + ++DMYC C 
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD-SKLATTVIDMYCKCG 246

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
            +E    VF+ +  K I+ WN MI G   +   E A+ LF +ME    + P+  T  +V+
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREM-VAPDGITFVNVL 305

Query: 394 PACVRSEAFPDKEGIHGHAIK-LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
            AC  S    + +    +  + LGL         ++D+  R G +E ++ + ++M V   
Sbjct: 306 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 365

Query: 453 VSWNTMITGYTICGQHGD 470
                 + G   C  HG+
Sbjct: 366 AGVLGALVG--ACRIHGN 381



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   + +  +SN+  EA   +  M   ++  D F   ++L A  G+  L  GK IH ++
Sbjct: 164 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 223

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            K G  L S  +A T+++MY KCG  +    +VF+ + +K   SWN MI  L   GK + 
Sbjct: 224 EKSGIELDS-KLATTVIDMYCKCGC-LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 281

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
           A+E F+ M    V P   T V+V  AC++
Sbjct: 282 AIELFKEMEREMVAPDGITFVNVLSACAH 310


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/746 (33%), Positives = 418/746 (56%), Gaps = 32/746 (4%)

Query: 45  WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
           W   L+S   +  ++EAI  Y +M    IQ +++ FP+VL+A +G  DL +G+++H  ++
Sbjct: 67  WGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRII 126

Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
           K G+ +  V V   L+++YG+ G  +    KVF  +  +D VSW+S+I+++   G+ +  
Sbjct: 127 KSGFDMDPV-VNTALLSVYGELGY-LDSARKVFGEMPLRDLVSWSSIISSVVENGEINEG 184

Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
           L+AFR M+     P S  +++V  AC  L     LRL +  HG  L+ G E + F+ ++L
Sbjct: 185 LDAFRCMVSEGGTPDSVLVLTVVEACGELGV---LRLAKSAHGYILKRGIENDRFVDSSL 241

Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
           + MYAK G +  A+ +F++   R   +W  ++SS +      EA+     M    ++P+ 
Sbjct: 242 IFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNS 301

Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFD 343
           V++  +L +C++L +L  GK +H   ++ND+  +   +G  L+++Y    + +   ++  
Sbjct: 302 VTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILH 361

Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
            I  + IA+WN +I+ Y Q    +E + LF++M++  G  P++ +++S + A        
Sbjct: 362 EIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQK-QGFMPDSFSLASSLSASGNEGELQ 420

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
               IHGH IK     D YV N+L++MYS+ G ++++  IFD ME +  V+WN+MI+G +
Sbjct: 421 LGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
             G    A+ L   M                  V  P+   +  ++V+  C  L  L KG
Sbjct: 480 QNGYSTKAISLFDLMY-----------------VTCPEIGEVAFVSVIQACSHLGFLEKG 522

Query: 524 KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMH 583
           K IH   I   +   + + +ALVDMYAKCG L  A+RVFD M  R+V++W+ +I +YG+H
Sbjct: 523 KWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVH 582

Query: 584 GEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIE 643
           G+  EV+ L   M+  G     +KPN+VT + + +ACSH+G V EGM LF+    D+GIE
Sbjct: 583 GQISEVIFLFSKMLESG-----IKPNDVTVMNVLSACSHAGCVKEGM-LFFNSMRDFGIE 636

Query: 644 PSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQ 703
           P  +H+ C+VDLL RAG +++AY++I +MP     A  W +LL  CRIHQ ++I +   +
Sbjct: 637 PKREHFVCIVDLLSRAGDLDEAYEIIKLMPFP-PGASIWGALLNGCRIHQRMDIAKNIQR 695

Query: 704 NLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFL 763
            L+ ++ D   HY LLSNIY++   W++  +VR  MK  G++K P  S +E G + ++F 
Sbjct: 696 ELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFG 755

Query: 764 AGDGSHQQSEQLHGFLENLSERMRKE 789
           AGD S+ Q +  +    N     R+E
Sbjct: 756 AGDASYPQLKYTYSTFNNAQRSSREE 781



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 178/675 (26%), Positives = 320/675 (47%), Gaps = 47/675 (6%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT-LVNMYGKCGSDMWDVYKVFD 138
           +  + KA   ++ L+   Q+HAH++     L +  + +T L+  Y + G D+     VF 
Sbjct: 4   YMPLFKASTTLRQLA---QLHAHIIVTA--LHNDPLPSTKLIESYSQLG-DLQSSTSVFR 57

Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
                D   W  ++ +    G +  A+  +  ML   ++ +S+T  SV  ACS       
Sbjct: 58  TFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGD--- 114

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L +G++VHG  ++ G + +  +  AL+++Y +LG +D A+ +F     RDLVSW++I+SS
Sbjct: 115 LGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISS 174

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
           + +N +  E +   R M   G  PD V + +V+ AC  L +L   K  H Y L+  I  D
Sbjct: 175 VVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIEND 234

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
             FV S+L+ MY  C  +     VF+ ++ +  + W AMI+ Y    Y +EAL LF+ M+
Sbjct: 235 R-FVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQ 293

Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRD-RYVQNALMDMYSRMGR 436
           +   + PN+ TM  ++ +C       + + +H   IK  L  +   +   L+++Y+   +
Sbjct: 294 KTE-VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAK 352

Query: 437 IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
            ++ + I  ++  R    WNT+I+ Y   G       LL+E  ++     +         
Sbjct: 353 HDLCEKILHEIGGRGIAVWNTLISVYAQKG-------LLKETVDLFVRMQKQGF------ 399

Query: 497 VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN 556
                P+S +L + L   G    L  G +IH + I+     + V  S L++MY+KCG ++
Sbjct: 400 ----MPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNS-LINMYSKCGYVD 454

Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIAL 616
            A  +FD M  + V+TWN +I     +G   + + L   M       G     EV F+++
Sbjct: 455 LAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIG-----EVAFVSV 509

Query: 617 FAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
             ACSH G + +G  + +K+    G+         +VD+  + G ++ A ++ + M    
Sbjct: 510 IQACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSER- 567

Query: 677 DKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSS---AQLWDKAM 733
               +WSSL+ +  +H   +I E+      +LE  +  + V + N+ S+   A    + M
Sbjct: 568 -SVVSWSSLISSYGVHG--QISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGM 624

Query: 734 DVRKKMKEMGVRKEP 748
                M++ G+  EP
Sbjct: 625 LFFNSMRDFGI--EP 637



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 223/449 (49%), Gaps = 13/449 (2%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   + S       +EA+  ++ M +++++P++     +L++   +  L  GK +
Sbjct: 264 RSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSV 323

Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
           H  V+K     +   +  TL+ +Y      D+ +  K+   I  +    WN++I+   + 
Sbjct: 324 HCVVIKNDLDANLDCLGPTLLELYAATAKHDLCE--KILHEIGGRGIAVWNTLISVYAQK 381

Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF 218
           G     ++ F  M      P SF+L S   A  N      L+LG Q+HG+ ++    + +
Sbjct: 382 GLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN---EGELQLGLQIHGHVIKRPFMDEY 438

Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           + N+L+ MY+K G VD A  +F   E + +V+WN+++S LSQN    +A+     M +  
Sbjct: 439 VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTC 498

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
            +   V+  SV+ ACSHL  L+ GK IH + L    +    F+ +ALVDMY  C +++  
Sbjct: 499 PEIGEVAFVSVIQACSHLGFLEKGKWIH-HKLITCGVRKCIFIETALVDMYAKCGDLQTA 557

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
           +RVFD +S++ +  W+++I+ YG +    E + LF KM E +G+ PN  T+ +V+ AC  
Sbjct: 558 QRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLE-SGIKPNDVTVMNVLSAC-- 614

Query: 399 SEAFPDKEGI--HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
           S A   KEG+         G+   R     ++D+ SR G ++ +  I   M      S W
Sbjct: 615 SHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674

Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEE 484
             ++ G  I  +   A  + RE+ N++ +
Sbjct: 675 GALLNGCRIHQRMDIAKNIQRELWNIQTD 703



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 138/569 (24%), Positives = 261/569 (45%), Gaps = 46/569 (8%)

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
           L+  Y++LG +  + ++F++F   D   W  ++ S   N  + EA+    QM  + I+ +
Sbjct: 39  LIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQAN 98

Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
             +  SVL ACS    L  G+ +H   +++   +D   V +AL+ +Y     ++  R+VF
Sbjct: 99  SYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMD-PVVNTALLSVYGELGYLDSARKVF 157

Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
             +  + +  W+++I+   +N    E L  F  M    G  P++  + +VV AC      
Sbjct: 158 GEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGT-PDSVLVLTVVEACGELGVL 216

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
              +  HG+ +K G+  DR+V ++L+ MY++ G +  ++ +F+++  R T +W  MI+ Y
Sbjct: 217 RLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSY 276

Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
            + G   +AL L   MQ  E E                 PNS+T+  +L  C  LS L +
Sbjct: 277 NLGGYLKEALALFVSMQKTEVE-----------------PNSVTMRIILRSCTNLSLLRE 319

Query: 523 GKEIHAYAIRNMLATDV-VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYG 581
           GK +H   I+N L  ++  +G  L+++YA     +   ++   +  R +  WN +I  Y 
Sbjct: 320 GKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYA 379

Query: 582 MHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYG 641
             G  +E ++L   M  +G       P+  +  +  +A  + G +  G+ +   +     
Sbjct: 380 QKGLLKETVDLFVRMQKQG-----FMPDSFSLASSLSASGNEGELQLGLQIHGHVIK--- 431

Query: 642 IEPSPDHYA--CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN-VEIG 698
             P  D Y    ++++  + G V+ AY + + M P+      W+S++    + QN     
Sbjct: 432 -RPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPK--GVVTWNSMISG--LSQNGYSTK 486

Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQL--WDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
            I+  +L  +          +S I + + L   +K   +  K+   GVRK   C +IE  
Sbjct: 487 AISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK---CIFIE-- 541

Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSER 785
             +    A  G  Q ++++    +N+SER
Sbjct: 542 TALVDMYAKCGDLQTAQRV---FDNMSER 567


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 268/895 (29%), Positives = 436/895 (48%), Gaps = 106/895 (11%)

Query: 80  FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
           F         I+ L+  +++HA ++K     + VT+  +++  Y + G D     KVF  
Sbjct: 31  FSPFFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFG-DFESATKVFFV 89

Query: 140 ITEKDQVSWNSMIATLCRF-GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG 198
              ++ + WNS I     F G     L  F+ +    V+  S  L  V   C  L     
Sbjct: 90  GFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALME--- 146

Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
           L LG +VH   ++ G   +  +  AL+ +Y K   +D A  +F     ++   WNTIV +
Sbjct: 147 LWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMA 206

Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
             +++K+ +A+   R+M     K    +I  +L AC  L  L+ GK+IH Y +R    + 
Sbjct: 207 NLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFG-RVS 265

Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
           N+ + +++V MY     +E  R  FD   D   A WN++I+ Y  N+    A  L  +ME
Sbjct: 266 NTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEME 325

Query: 378 ----------------------------------EVAGLWPNATTMSSVVPACVRSEAFP 403
                                             + AG  P++ +++S + A +    F 
Sbjct: 326 SSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFN 385

Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
             + IHG+ ++  L  D YV  +L+D Y +   ++ ++ +F   + ++  +WN++I+GYT
Sbjct: 386 LGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYT 445

Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETV---------------------LRPKP 502
             G   +A  LL +M+   EE  + ++   +  V                     L   P
Sbjct: 446 YKGLFDNAEKLLNQMK---EEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTP 502

Query: 503 NSITLMTVLPG-----------------------------------CGALSALAKGKEIH 527
           N ++   ++ G                                   C   S L  G+EIH
Sbjct: 503 NVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIH 562

Query: 528 AYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQ 587
            +++R+    D+ + +AL+DMY K G L  A  VF  +  + +  WN ++M Y ++G G+
Sbjct: 563 CFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGE 622

Query: 588 EVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPD 647
           EV  L   M   G     V+P+ +TF AL + C +SG+V +G   F  MK DY I P+ +
Sbjct: 623 EVFTLFDEMRKTG-----VRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIE 677

Query: 648 HYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
           HY+C+VDLLG+AG +++A   I+ +P + D A  W ++L ACR+H++++I EIAA+NL  
Sbjct: 678 HYSCMVDLLGKAGFLDEALDFIHAVPQKAD-ASIWGAVLAACRLHKDIKIAEIAARNLLR 736

Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG 767
           LEP  +++Y L+ NIYS+   W     +++ M  +GV+     SWI+    IH F     
Sbjct: 737 LEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGK 796

Query: 768 SHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNT 827
           SH +  +++  L  L   ++K GYV D +CV  N+++ EKE +L  H+EKLA+ +G++ T
Sbjct: 797 SHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKT 856

Query: 828 PPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
             G+ IRV KN R+C+DCH   K+IS   +REI LRD  RFHHF NG CSC D W
Sbjct: 857 KGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 159/640 (24%), Positives = 272/640 (42%), Gaps = 142/640 (22%)

Query: 59  REAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
            E +  + E+    ++ D+ A   VLK    + +L LG ++HA +VK G+ +  V ++  
Sbjct: 113 HEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHV-DVHLSCA 171

Query: 119 LVNMYGK-CGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
           L+N+Y K  G D     +VFD    ++   WN+++    R  KW+ ALE FR M  ++ +
Sbjct: 172 LINLYEKYLGID--GANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAK 229

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDA 236
            +  T+V +  AC  L     L  G+Q+HG  +R G   NT I N++++MY++  R++ A
Sbjct: 230 ATDGTIVKLLQACGKLR---ALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELA 286

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGV------------ 284
           +  F S ED +  SWN+I+SS + ND    A   L++M   G+KPD +            
Sbjct: 287 RVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQ 346

Query: 285 -----------------------SIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
                                  SI S L A   L   + GKEIH Y +R+ +  D  +V
Sbjct: 347 GSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYD-VYV 405

Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA- 380
            ++LVD Y     ++    VF    +K I  WN++I+GY      + A  L  +M+E   
Sbjct: 406 CTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGI 465

Query: 381 ---------------------------------GLWPNATTMSSVVPACVRSEAFPDK-- 405
                                            GL PN  + ++++  C ++E + D   
Sbjct: 466 KPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQ 525

Query: 406 ---------------------------------EGIHGHAIKLGLGRDRYVQNALMDMYS 432
                                            E IH  +++ G   D Y+  AL+DMY 
Sbjct: 526 FFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYG 585

Query: 433 RMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
           + G+++++  +F +++ +    WN M+ GY I G   +   L  EM+             
Sbjct: 586 KGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMR------------- 632

Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG------SALV 546
             +T +R  P++IT   +L GC        G  +  +   + + TD  +       S +V
Sbjct: 633 --KTGVR--PDAITFTALLSGCK-----NSGLVMDGWKYFDSMKTDYNINPTIEHYSCMV 683

Query: 547 DMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE 585
           D+  K G L+ A      +P + +   W  ++ A  +H +
Sbjct: 684 DLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKD 723



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 47/361 (13%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           +W   L        +   + ++  +  +  +PD+ +  + L+AV G+   +LGK+IH ++
Sbjct: 335 TWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYI 394

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWD 162
           ++       V V  +LV+ Y K  +D  D  + VF     K+  +WNS+I+     G +D
Sbjct: 395 MRSKLEY-DVYVCTSLVDKYIK--NDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFD 451

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
            A +    M    ++P   T                                WN+     
Sbjct: 452 NAEKLLNQMKEEGIKPDLVT--------------------------------WNS----- 474

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDL----VSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
           L++ Y+  GR ++A  +    +   L    VSW  ++S   QN+ +++A+ F  QM    
Sbjct: 475 LVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEEN 534

Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
           +KP+  +I ++L AC+   +L  G+EIH +++R+  L D+ ++ +AL+DMY    +++  
Sbjct: 535 VKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFL-DDIYIATALIDMYGKGGKLKVA 593

Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
             VF  I +K +  WN M+ GY    + EE   LF +M +  G+ P+A T ++++  C  
Sbjct: 594 HEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKT-GVRPDAITFTALLSGCKN 652

Query: 399 S 399
           S
Sbjct: 653 S 653


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/587 (38%), Positives = 328/587 (55%), Gaps = 24/587 (4%)

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L   D G    A  L   I   N    + L+  Y    ++E  R++FD +  + +A WNA
Sbjct: 85  LAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNA 144

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M+ G   +  +EE+L  F  M    G+ P+   + S+   C           +H + ++ 
Sbjct: 145 MVAGLTNSGLNEESLGFFFAMRR-EGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRS 203

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
           GL RD  V ++L  MY R G +   +     +   + VS NT I+G T  G    AL   
Sbjct: 204 GLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFF 263

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
             M+    E                  N++T ++ +  C  L+ALA+G++IHA AI+  +
Sbjct: 264 CLMRGAGVE-----------------ANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGV 306

Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
              V V ++LV MY++CGCL  + RV       +++  + +I AYG HG GQ+ + L K 
Sbjct: 307 DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQ 366

Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
           M+A G+     +PNEVTF+ L  ACSHSG+  EGM+ F  M   YG++PS  HY C+VDL
Sbjct: 367 MMAAGA-----EPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDL 421

Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
           LGR+G + +A  LI  MP + D    W +LL AC+  +  ++ E  A+ +  L+P  ++ 
Sbjct: 422 LGRSGCLNEAEDLILSMPVQPDGV-IWKTLLSACKTQKKFDMAERIAERVIELDPHDSAS 480

Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
           YVLLSNI +++  W+    VR+ M+E  VRKEPG SW+E   +IH+F  GD SH +  ++
Sbjct: 481 YVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREI 540

Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
              LE +  R+R+ GY PD S V H++ +EEKE  L  HSEKLAIAF  L+ P G  IRV
Sbjct: 541 VECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRV 600

Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            KNLRVC+DCH A K +SK+  REI++RDV RFHHFK+G CSCGDYW
Sbjct: 601 MKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 21/371 (5%)

Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           R+ + N    N L+  Y K G ++ A+ LF     R++ +WN +V+ L+ +    E++ F
Sbjct: 102 RIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGF 161

Query: 271 LRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC 330
              M   G++PD   + S+   C+ L  + +G+++HAY +R+ +  D   VGS+L  MY 
Sbjct: 162 FFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMC-VGSSLAHMYM 220

Query: 331 NCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
            C  +  G      +    I   N  I+G  QN   E AL  F  M   AG+  NA T  
Sbjct: 221 RCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRG-AGVEANAVTFV 279

Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
           S V +C    A    + IH  AIK G+ +   V  +L+ MYSR G +  S+ +  +    
Sbjct: 280 SAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGT 339

Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
           D V  + MI+ Y   G    A+ L ++M     E                 PN +T +T+
Sbjct: 340 DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAE-----------------PNEVTFLTL 382

Query: 511 LPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR- 568
           L  C       +G        +   L   V   + +VD+  + GCLN A  +   MPV+ 
Sbjct: 383 LYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQP 442

Query: 569 NVITWNVIIMA 579
           + + W  ++ A
Sbjct: 443 DGVIWKTLLSA 453



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 188/391 (48%), Gaps = 20/391 (5%)

Query: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135
           D F    +L A A + D    + +   + K      +V   N L+  Y K G D+    K
Sbjct: 76  DRFTANHLLLAYADLGDFPTARGLFERIPK-----RNVMSWNILIGGYVKNG-DLETARK 129

Query: 136 VFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR 195
           +FD +  ++  +WN+M+A L   G  + +L  F  M    ++P  + L S+   C+ L  
Sbjct: 130 LFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGL-- 187

Query: 196 RDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
           RD +  GRQVH   +R G + +  + ++L  MY + G + D +   ++    ++VS NT 
Sbjct: 188 RDVVS-GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTT 246

Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
           +S  +QN     A+ F   M   G++ + V+  S + +CS L  L  G++IHA A++   
Sbjct: 247 ISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTG- 305

Query: 315 LIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
            +D    V ++LV MY  C  +    RV    S   + L +AMI+ YG + + ++A+ LF
Sbjct: 306 -VDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLF 364

Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI---KLGLGRDRYVQNALMDM 430
            +M   AG  PN  T  +++ AC  S +    EG++   +     GL         ++D+
Sbjct: 365 KQM-MAAGAEPNEVTFLTLLYAC--SHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDL 421

Query: 431 YSRMGRIEISKTIFDDMEVR-DTVSWNTMIT 460
             R G +  ++ +   M V+ D V W T+++
Sbjct: 422 LGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 60  EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
           E++  +  M R  +QPD +   ++ +  AG++D+  G+Q+HA+VV+ G     + V ++L
Sbjct: 157 ESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLD-RDMCVGSSL 215

Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
            +MY +CG  + D       +   + VS N+ I+   + G  + ALE F +M  + VE +
Sbjct: 216 AHMYMRCGF-LRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEAN 274

Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMNALMAMYAKLGRVDDAKT 238
           + T VS   +CS+L+    L  G+Q+H  +++ G      +M +L+ MY++ G + D++ 
Sbjct: 275 AVTFVSAVTSCSDLA---ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSER 331

Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
           +   +   DLV  + ++S+   +    +AV   +QM   G +P+ V+  ++L ACSH  +
Sbjct: 332 VCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGL 391

Query: 299 LDTG 302
            D G
Sbjct: 392 KDEG 395



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)

Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
           +   C AL  L   +++HA+A  +  A D    + L+  YA  G    AR +F+ +P RN
Sbjct: 51  IFRACQALPLL---RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRN 107

Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
           V++WN++I  Y  +G+ +   +L   M A          N  T+ A+ A  ++SG+  E 
Sbjct: 108 VMSWNILIGGYVKNGDLETARKLFDEMPAR---------NVATWNAMVAGLTNSGLNEES 158

Query: 630 MDLFYKMK------DDYGI 642
           +  F+ M+      D+YG+
Sbjct: 159 LGFFFAMRREGMQPDEYGL 177


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/671 (35%), Positives = 367/671 (54%), Gaps = 37/671 (5%)

Query: 218 FIMNALMAMYAKLGRVDDAKTLFKS--FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
            + + L   YA+ G +  A++   +       + +WN ++++ S+     EA+   R + 
Sbjct: 37  ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP 96

Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA----LRNDILIDNSFVGSALVDMYCN 331
               +PD  +    L AC+ L  L TG+ +   A      NDI     FV S+++++Y  
Sbjct: 97  -PAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDI-----FVCSSVLNLYAK 150

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  ++   +VFD +  +    W+ M+TG+       +A+ ++++M    GL  +   +  
Sbjct: 151 CGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRR-DGLEADEVVIVG 209

Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
           V+ AC  +        +HG+ ++  +  D  +  +L+DMY++ G  + ++ +F+ M  R+
Sbjct: 210 VMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRN 269

Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
            VSW+ +I+     G   +AL L R MQ                 V    PNS  ++  L
Sbjct: 270 DVSWSALISQLAQYGNADEALGLFRMMQ-----------------VSGLHPNSGPVVGAL 312

Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
             C  L  L  GK IH + +R  L  D +VG+A++DMY+KCG L+ A+ +FD +  R++I
Sbjct: 313 LACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLI 371

Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
           +WNV+I   G HG G++ L L + M     +  EV+P+  TF +L +A SHSG+V EG  
Sbjct: 372 SWNVMIACCGAHGRGRDALSLFQEM-----KRNEVRPDHATFASLLSALSHSGLVEEGKF 426

Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
            F  M ++YGIEP   H  C+VDLL R+G VE+A  L+  +  +        +LL  C  
Sbjct: 427 WFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSK-PTISILVALLSGCLN 485

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
           +  +E+GE  A+ +  L+P       L+SN+Y++A+ W K  +VRK MK+ G +K PGCS
Sbjct: 486 NNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCS 545

Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
            IE    +H F+  D SH Q  Q+   +  L   MRK GY+P T  V H++ E  KE LL
Sbjct: 546 SIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLL 605

Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
             HSE+LA AFG+LNT PGT + V KNLRVC DCH A K++SKI  REI++RD +RFHHF
Sbjct: 606 SRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHF 665

Query: 872 KNGTCSCGDYW 882
           K+G CSCGDYW
Sbjct: 666 KDGACSCGDYW 676



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 200/400 (50%), Gaps = 10/400 (2%)

Query: 1   MASSAQCLTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFRE 60
           ++SSA C  +L S   ++       A   ++L    +      +W   L + +R     E
Sbjct: 28  VSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHE 87

Query: 61  AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
           A+  +  +  +  +PD+  F   L A A + DL+ G+ +       GYG + + V ++++
Sbjct: 88  ALRVFRALPPA-ARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYG-NDIFVCSSVL 145

Query: 121 NMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSS 180
           N+Y KCG+ M D  KVFDR+ ++D+V+W++M+      G+   A+E +  M    +E   
Sbjct: 146 NLYAKCGA-MDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADE 204

Query: 181 FTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTL 239
             +V V  AC+        R+G  VHG  LR   + +  I  +L+ MYAK G  D A+ +
Sbjct: 205 VVIVGVMQACAATG---DARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRV 261

Query: 240 FKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
           F+    R+ VSW+ ++S L+Q     EA+   R M + G+ P+   +   L ACS L +L
Sbjct: 262 FELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLL 321

Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
             GK IH + LR   L  +  VG+A++DMY  C  +   + +FD +  + +  WN MI  
Sbjct: 322 KLGKSIHGFILRT--LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIAC 379

Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
            G +    +AL LF +M+    + P+  T +S++ A   S
Sbjct: 380 CGAHGRGRDALSLFQEMKR-NEVRPDHATFASLLSALSHS 418



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 148/267 (55%), Gaps = 7/267 (2%)

Query: 38  QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
           + R + +W   +     + Q  +AI  Y+ M R  ++ D      V++A A   D  +G 
Sbjct: 165 RKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGA 224

Query: 98  QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD-VYKVFDRITEKDQVSWNSMIATLC 156
            +H +++++   +  V ++ +LV+MY K G  ++D   +VF+ +  ++ VSW+++I+ L 
Sbjct: 225 SVHGYLLRHAMQMD-VVISTSLVDMYAKNG--LFDQARRVFELMPHRNDVSWSALISQLA 281

Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
           ++G  D AL  FRMM  S + P+S  +V   LACS+L     L+LG+ +HG  LR  E +
Sbjct: 282 QYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGL---LKLGKSIHGFILRTLELD 338

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             +  A++ MY+K G +  A+ LF     RDL+SWN +++    + +  +A+   ++M  
Sbjct: 339 RMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKR 398

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGK 303
             ++PD  + AS+L A SH  +++ GK
Sbjct: 399 NEVRPDHATFASLLSALSHSGLVEEGK 425


>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
 gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/636 (37%), Positives = 356/636 (55%), Gaps = 66/636 (10%)

Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYC--NCREVECGRRVFDFIS 346
           + P  S  +     K+IHA+ ++    I +    + L+        RE++  R+ F  I 
Sbjct: 18  LFPQISRCKTTRHLKQIHAHFIKTG-QIHHPLAAAELLKFLTLSTQREIKYARKFFSQIH 76

Query: 347 DKKIALWNAMITGYGQNEYDE-------EALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
                 WN +I     ++ D+       EAL+ F  M     + PN  T   V+ AC + 
Sbjct: 77  HPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKL 136

Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQ--------------------------------NAL 427
               + + +HG  +KLGL  D +V+                                N +
Sbjct: 137 ARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVM 196

Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
           +D Y RMG +  S+ +FD M  +  VSWN MI+G    G   +A+ +  +MQ        
Sbjct: 197 IDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQ-------- 248

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
                L +      PN +TL++VLP    L A+  GK +H +A +N +  D V+GSAL+D
Sbjct: 249 -----LGDV----PPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALID 299

Query: 548 MYAKCGCLNFARRVFD-LMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEV 606
           MY+KCG ++ A +VF+ +   +N ITW+ II    MHG  ++ L+    M   G     V
Sbjct: 300 MYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAG-----V 354

Query: 607 KPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY 666
            P++V +I + +ACSH+G+V EG  ++Y M +  G+ P  +HY C+VDLLGRAG +E+A 
Sbjct: 355 TPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAE 414

Query: 667 QLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSA 726
           QLI  MP + D      +LLGAC++H N+E+GE  A+ L    P  +  YV LSN+++S 
Sbjct: 415 QLILNMPVKPDDV-ILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASE 473

Query: 727 QLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERM 786
             W+  + VR KMKE+ +RK+PGCSWIE    IH+FL  D SH ++E +H  LE +S+R+
Sbjct: 474 GNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRL 533

Query: 787 RKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 846
           R  GY P+T+ VL N++E+EK++ L  HSEK+AIAFG+++T P T +++ KNLRVC DCH
Sbjct: 534 RSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCH 593

Query: 847 QATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
            + K +SKI +R+II+RD +RFHHF+NG+CSC DYW
Sbjct: 594 SSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 199/421 (47%), Gaps = 52/421 (12%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
           KQIHAH +K G     +  A  L  +      ++    K F +I   +  SWN++I  L 
Sbjct: 32  KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALA 91

Query: 157 RFGKWDL-------ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
                DL       AL  F  ML    VEP+ FT   V  AC+ L+R   +  G+Q+HG 
Sbjct: 92  DSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLAR---IEEGKQLHGF 148

Query: 209 SLRVG---------------------------------EWNTFIMNALMAMYAKLGRVDD 235
            +++G                                 E N  + N ++  Y ++G +  
Sbjct: 149 VVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRA 208

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           ++ LF S  ++ +VSWN ++S  +QN  F EA+     M L  + P+ V++ SVLPA S 
Sbjct: 209 SRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSR 268

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL-WN 354
           L  ++ GK +H +A +N+I ID+  +GSAL+DMY  C  ++   +VF+ I +KK  + W+
Sbjct: 269 LGAIELGKWVHLFAEKNEIEIDD-VLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWS 327

Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
           A+I G   +    +AL  F +M++ AG+ P+      V+ AC  +    +   I+ H + 
Sbjct: 328 AIIGGLAMHGRARDALDHFWRMQQ-AGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVN 386

Query: 415 L-GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDAL 472
           + GL         ++D+  R G +E ++ +  +M V+ D V    ++     C  HG+  
Sbjct: 387 IVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGA---CKMHGNIE 443

Query: 473 M 473
           M
Sbjct: 444 M 444



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 44/286 (15%)

Query: 60  EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
           EA+L +  M T   ++P+ F FP VLKA A +  +  GKQ+H  VVK G  +S   V + 
Sbjct: 105 EALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGL-VSDEFVRSN 163

Query: 119 LVNMYGKCGS-----------------DMWDVY--------------KVFDRITEKDQVS 147
           LV +Y  CG+                  +W+V               ++FD +  K  VS
Sbjct: 164 LVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVS 223

Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH- 206
           WN MI+   + G +  A+E F  M   +V P+  TLVSV  A   +SR   + LG+ VH 
Sbjct: 224 WNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPA---VSRLGAIELGKWVHL 280

Query: 207 ---GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED-RDLVSWNTIVSSLSQND 262
               N + +   +  + +AL+ MY+K G +D A  +F+   + ++ ++W+ I+  L+ + 
Sbjct: 281 FAEKNEIEI---DDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHG 337

Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
           +  +A+    +M   G+ P  V    VL ACSH  +++ G+ I+ +
Sbjct: 338 RARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYH 383



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 3/150 (2%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   A++  F+EAI  + +M   D+ P+     +VL AV+ +  + LGK +H   
Sbjct: 223 SWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFA 282

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWD 162
            K    +  V + + L++MY KCGS +    +VF+ I  +K+ ++W+++I  L   G+  
Sbjct: 283 EKNEIEIDDV-LGSALIDMYSKCGS-IDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRAR 340

Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSN 192
            AL+ F  M  + V PS    + V  ACS+
Sbjct: 341 DALDHFWRMQQAGVTPSDVVYIGVLSACSH 370


>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
 gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/542 (38%), Positives = 325/542 (59%), Gaps = 23/542 (4%)

Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
           +F  I D     +N MI GY      EEAL  + +M +  G  P+  T   ++ AC R +
Sbjct: 88  IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACTRLK 146

Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
           +  + + IHG   KLGL  D +VQN+L++MY R G +E+S  +F+ +E +   SW++M++
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206

Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
                G   + L+L R M                ET L+ + +   +++ L  C    AL
Sbjct: 207 ARAGMGMWSECLLLFRGM--------------CSETNLKAEESG--MVSALLACANTGAL 250

Query: 521 AKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAY 580
             G  IH + +RN+   +++V ++LVDMY KCGCL+ A  +F  M  RN +T++ +I   
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310

Query: 581 GMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDY 640
            +HGEG+  L +   M+ EG     ++P+ V ++++  ACSHSG+V EG  +F +M  + 
Sbjct: 311 ALHGEGESALRMFSKMIKEG-----LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365

Query: 641 GIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI 700
            +EP+ +HY C+VDLLGRAG +E+A + I  +P E +    W + L  CR+ QN+E+G+I
Sbjct: 366 KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV-IWRTFLSQCRVRQNIELGQI 424

Query: 701 AAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIH 760
           AAQ L  L       Y+L+SN+YS  Q+WD     R ++   G+++ PG S +E   + H
Sbjct: 425 AAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTH 484

Query: 761 KFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAI 820
           +F++ D SH + ++++  L  +  +++ EGY PD + +L NV+EEEK+  L GHS+K+AI
Sbjct: 485 RFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAI 544

Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
           AFG+L TPPG+ I++A+NLR+C+DCH  TK IS I  REI++RD  RFH FK GTCSC D
Sbjct: 545 AFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKD 604

Query: 881 YW 882
           YW
Sbjct: 605 YW 606



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 141/256 (55%), Gaps = 7/256 (2%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           F EA+  Y EM +   +PDNF +P +LKA   ++ +  GKQIH  V K G   + V V N
Sbjct: 113 FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE-ADVFVQN 171

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLY-SNV 176
           +L+NMYG+CG +M     VF+++  K   SW+SM++     G W   L  FR M   +N+
Sbjct: 172 SLINMYGRCG-EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230

Query: 177 EPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNTFIMNALMAMYAKLGRVDD 235
           +     +VS  LAC+N      L LG  +HG  LR + E N  +  +L+ MY K G +D 
Sbjct: 231 KAEESGMVSALLACANTG---ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDK 287

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A  +F+  E R+ ++++ ++S L+ + +   A+    +M   G++PD V   SVL ACSH
Sbjct: 288 ALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSH 347

Query: 296 LEMLDTGKEIHAYALR 311
             ++  G+ + A  L+
Sbjct: 348 SGLVKEGRRVFAEMLK 363



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 177/375 (47%), Gaps = 21/375 (5%)

Query: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWD-----VYKVFDRITEKDQVSWNSM 151
           KQ+HA  +K     SS   A++++    KC    W+        +F  I +     +N+M
Sbjct: 47  KQVHARFIKLSLFYSSSFSASSVL---AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTM 103

Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR 211
           I        ++ AL  +  M+    EP +FT   +  AC+ L     +R G+Q+HG   +
Sbjct: 104 IRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLK---SIREGKQIHGQVFK 160

Query: 212 VG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
           +G E + F+ N+L+ MY + G ++ +  +F+  E +   SW+++VS+ +    + E ++ 
Sbjct: 161 LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLL 220

Query: 271 LRQMALR-GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
            R M     +K +   + S L AC++   L+ G  IH + LRN I   N  V ++LVDMY
Sbjct: 221 FRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN-ISELNIIVQTSLVDMY 279

Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
             C  ++    +F  +  +    ++AMI+G   +   E AL +F KM +  GL P+    
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK-EGLEPDHVVY 338

Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGL---GRDRYVQNALMDMYSRMGRIEISKTIFDD 446
            SV+ AC  S    +   +    +K G      + Y    L+D+  R G +E +      
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY--GCLVDLLGRAGLLEEALETIQS 396

Query: 447 MEV-RDTVSWNTMIT 460
           + + ++ V W T ++
Sbjct: 397 IPIEKNDVIWRTFLS 411



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 161/348 (46%), Gaps = 28/348 (8%)

Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
           A ++F+  +D     +NT++        F EA+ F  +M  RG +PD  +   +L AC+ 
Sbjct: 85  AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144

Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
           L+ +  GK+IH    +  +  D  FV ++L++MY  C E+E    VF+ +  K  A W++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEAD-VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203

Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
           M++         E L+LF  M     L    + M S + AC  + A      IHG  ++ 
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263

Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
               +  VQ +L+DMY + G ++ +  IF  ME R+ ++++ MI+G  + G+   AL + 
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323

Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
            +M              + E +   +P+ +  ++VL  C     + +G+ + A     ML
Sbjct: 324 SKM--------------IKEGL---EPDHVVYVSVLNACSHSGLVKEGRRVFA----EML 362

Query: 536 ATDVVVGSA-----LVDMYAKCGCLNFARRVFDLMPV-RNVITWNVII 577
               V  +A     LVD+  + G L  A      +P+ +N + W   +
Sbjct: 363 KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/701 (34%), Positives = 379/701 (54%), Gaps = 51/701 (7%)

Query: 202 GRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
            +++H + ++ G   + F+M  L+ +YAK G ++ A+ +F     R++VSW T+++    
Sbjct: 88  AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147

Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
           + K   AV   R+M   G  P   ++ + L A S L   + GK+IH Y+++  I  D S 
Sbjct: 148 DSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDAS- 206

Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
           +G++L  +Y  C  +EC  + F  I DK +  W  +I+ +G N      L  F++M    
Sbjct: 207 IGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSEC 266

Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
            + PN  T++S +  C   ++      IH   IKLG   +  ++N++M +Y + G I  +
Sbjct: 267 -VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEA 325

Query: 441 KTIFDDMEVRDTVSWNTMITGYT-------------ICGQHGDALMLLREMQNMEEEKNR 487
           K +FD+ME    V+WN MI G+               CG    ++ L         + NR
Sbjct: 326 KKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFL---------KLNR 376

Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
           + +          KP+  T  +VL  C +L AL +G+++HA  I+    +DVVVG+ALV+
Sbjct: 377 SGM----------KPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVN 426

Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
           MY KCG +  A + F  M +R +I+W  +I  Y  +G+ Q+ L L ++M   G     V+
Sbjct: 427 MYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAG-----VR 481

Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
           PN++TF+ + +ACSH+GMV E +D F  MK++Y I P  DHYAC++D+  R G++++A+ 
Sbjct: 482 PNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFD 541

Query: 668 LINMM---PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
            I  M   P EF     WS L+  CR    +E+G  AA+ L  L+P     Y LL N+Y 
Sbjct: 542 FIKEMDLEPNEF----IWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYL 597

Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
           SA  W +   VRK MKE  + +    SWI   D+I+ F     SH QS +++  L NL E
Sbjct: 598 SAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHE 657

Query: 785 RMRKEGYVPDTSCVL----HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
           + +  GY  + S  +     + +EE+  T +  HSEKLAIAFG+LNT     IRV K++ 
Sbjct: 658 KAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSIS 717

Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
           +C DCH   + IS + +REII+RD +R H F NG CSCGD+
Sbjct: 718 MCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 185/708 (26%), Positives = 330/708 (46%), Gaps = 105/708 (14%)

Query: 51  SEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
           SEAR   FREA LS+I   R   + ++  +  +L+     + +S  ++IHAH+VK G   
Sbjct: 47  SEARCLDFREA-LSFI---REGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTG-AH 101

Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRM 170
               +   LVN+Y KCG+ M    KVFD +  ++ VSW +++       K +LA++ FR 
Sbjct: 102 KDAFLMTFLVNVYAKCGT-METARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFRE 160

Query: 171 MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK 229
           ML +   P+++TL +   A S+L  ++   LG+Q+HG S++   E++  I N+L ++Y+K
Sbjct: 161 MLEAGAYPTNYTLGTALSASSDLHSKE---LGKQIHGYSIKYRIEFDASIGNSLCSLYSK 217

Query: 230 LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
            G ++ A   F+   D++++SW T++S+   N +    + F  +M    ++P+  ++ S 
Sbjct: 218 CGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSA 277

Query: 290 LPACSHLEMLDTGKEIHAYALR----NDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
           L  C  ++ LD G +IH+  ++    +++ I NS     ++ +Y  C  +   +++FD +
Sbjct: 278 LSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNS-----IMYLYLKCGWIHEAKKLFDEM 332

Query: 346 SDKKIALWNAMITGYGQ-----------NEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
               +  WNAMI G+ +           ++   EAL +F+K+   +G+ P+  T SSV+ 
Sbjct: 333 ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNR-SGMKPDLFTFSSVLS 391

Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
            C    A    E +H   IK G   D  V  AL++MY++ G IE +   F +M +R  +S
Sbjct: 392 VCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLIS 451

Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
           W +MITGY   GQ   AL+L  +M+                 +   +PN IT + VL  C
Sbjct: 452 WTSMITGYAQNGQPQQALLLFEDMR-----------------LAGVRPNKITFVGVLSAC 494

Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSA-LVDMYAKCGCLNFARRVFDLMPVRNVITW 573
                + +  +           T V+   A L+DM+ + G L+                 
Sbjct: 495 SHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLD----------------- 537

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
                         E  + +K M        +++PNE  +  L A C   G +  G   F
Sbjct: 538 --------------EAFDFIKEM--------DLEPNEFIWSILIAGCRSQGKLELG---F 572

Query: 634 YKMKDDYGIEPS-PDHYACVVDLLGRAGKVEDAYQLINMMPPE-FDKAGAWSSLLGACRI 691
           Y  +    ++P   + Y  ++++   AGK ++  ++  MM  E   +   WS +    +I
Sbjct: 573 YAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKI 632

Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL----WDKAMDV 735
           +         AQ+           Y LL N++  A+     W+++++V
Sbjct: 633 YSFKRNARSHAQS--------GEMYELLGNLHEKAKSFGYEWEESLEV 672



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 221/435 (50%), Gaps = 27/435 (6%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +      ++   A+  + EM  +   P N+     L A + +    LGKQIH + 
Sbjct: 137 SWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYS 196

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
           +KY     + ++ N+L ++Y KCGS    V K F RI +K+ +SW ++I+     G+   
Sbjct: 197 IKYRIEFDA-SIGNSLCSLYSKCGSLECAV-KAFRRIRDKNVISWTTVISAWGDNGEAAT 254

Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
            L+ F  ML   VEP+ FTL S    C  +   D   +G Q+H  ++++G E N  I N+
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLD---IGTQIHSLTIKLGFESNLPIKNS 311

Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-----------LEAVMFL 271
           +M +Y K G + +AK LF   E   LV+WN +++  ++   F            EA+   
Sbjct: 312 IMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIF 371

Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
            ++   G+KPD  + +SVL  CS L  L+ G+++HA  ++   L D   VG+ALV+MY  
Sbjct: 372 LKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSD-VVVGTALVNMYNK 430

Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
           C  +E   + F  +S + +  W +MITGY QN   ++AL+LF  M  +AG+ PN  T   
Sbjct: 431 CGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDM-RLAGVRPNKITFVG 489

Query: 392 VVPACVRS----EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM 447
           V+ AC  +    EA  D   +  +  K+    D Y    L+DM+ R+GR++ +     +M
Sbjct: 490 VLSACSHAGMVDEAL-DYFQMMKNEYKITPVMDHYA--CLIDMFVRLGRLDEAFDFIKEM 546

Query: 448 EVR-DTVSWNTMITG 461
           ++  +   W+ +I G
Sbjct: 547 DLEPNEFIWSILIAG 561


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/549 (41%), Positives = 320/549 (58%), Gaps = 30/549 (5%)

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
           + +  RR+F  +  + +  WN M++G  ++   EEA  +F+ M        N+ + +++V
Sbjct: 144 DADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPV-----RNSVSWNAMV 198

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
                S      E    +A + G   D  +  A++  Y  +G +  +   F+ M VR+ V
Sbjct: 199 SGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLV 255

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN ++ GY       DAL L R    M  E N              +PN+ TL +VL G
Sbjct: 256 SWNAVVAGYVKNSHADDALRLFR---TMVREAN-------------VQPNASTLSSVLLG 299

Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
           C  LSAL  GK+IH + ++  L+ ++ VG++LV MY KCG L+ A ++F  M  R+V+ W
Sbjct: 300 CSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAW 359

Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
           N +I  Y  HG+G+E + L + M  EG     V+PN +TF+A+  AC H+G+   G+  F
Sbjct: 360 NAMISGYAQHGDGKEAINLFERMKDEG-----VEPNWITFVAVLTACIHTGLCDFGIRCF 414

Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
             M++ YGIEP  DHY+C+VDLL RAGK+E A  LI  MP E     A+ +LL ACR+++
Sbjct: 415 EGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFE-PHPSAYGTLLAACRVYK 473

Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
           N+E  E+AA  L   +P  A  YV L+NIY+ A  WD    VR+ MK+  V K PG SWI
Sbjct: 474 NLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWI 533

Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
           E    +H+F + D  H Q   +H  L  L+ERM+  GYVPD   VLH+V+E  K  +L  
Sbjct: 534 EIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMR 593

Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
           HSEKLAI+FG+++T PG T+R+ KNLRVC DCH A K ISKIE REIILRD  RFHHF+ 
Sbjct: 594 HSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRG 653

Query: 874 GTCSCGDYW 882
           G CSCGDYW
Sbjct: 654 GHCSCGDYW 662



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 152/316 (48%), Gaps = 27/316 (8%)

Query: 201 LGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
           LGR      L  R+   +    N L++ +   G  D A+ LF S   RD+VSWNT+VS L
Sbjct: 111 LGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGL 170

Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
           S++    EA      M +R    + VS  +++   +    +   +E      RN     +
Sbjct: 171 SKSGAVEEAKAVFLAMPVR----NSVSWNAMVSGFACSRDMSAAEEW----FRNAPEKGD 222

Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
           + + +A+V  Y +   V      F+ +  + +  WNA++ GY +N + ++AL LF  M  
Sbjct: 223 AVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVR 282

Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
            A + PNA+T+SSV+  C    A    + IH   +KL L R+  V  +L+ MY + G + 
Sbjct: 283 EANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLS 342

Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
            +  +F +M  RD V+WN MI+GY    QHGD     +E  N+ E          DE V 
Sbjct: 343 SACKLFGEMHTRDVVAWNAMISGY---AQHGDG----KEAINLFERMK-------DEGV- 387

Query: 499 RPKPNSITLMTVLPGC 514
             +PN IT + VL  C
Sbjct: 388 --EPNWITFVAVLTAC 401



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 171/362 (47%), Gaps = 40/362 (11%)

Query: 117 NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNV 176
           N L+  Y +    + D   +FDRI   D VS+N++++     G  D A   F  M   +V
Sbjct: 101 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 160

Query: 177 EPSSFTLVS---------------VALACSNLSRRDGLRLGRQVHGNSLRVGEW------ 215
             S  T+VS               +A+   N    + +  G     +     EW      
Sbjct: 161 V-SWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 219

Query: 216 --NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
             +  +  A+++ Y  +G V  A   F++   R+LVSWN +V+   +N    +A+   R 
Sbjct: 220 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 279

Query: 274 MALRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
           M     ++P+  +++SVL  CS+L  L  GK+IH + ++   L  N  VG++LV MYC C
Sbjct: 280 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP-LSRNLTVGTSLVSMYCKC 338

Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
            ++    ++F  +  + +  WNAMI+GY Q+   +EA+ LF +M++  G+ PN  T  +V
Sbjct: 339 GDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKD-EGVEPNWITFVAV 397

Query: 393 VPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
           + AC+ +         F   + ++G   ++    D Y  + ++D+  R G++E +  +  
Sbjct: 398 LTACIHTGLCDFGIRCFEGMQELYGIEPRV----DHY--SCMVDLLCRAGKLERAVDLIR 451

Query: 446 DM 447
            M
Sbjct: 452 SM 453



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 31/311 (9%)

Query: 44  SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
           SW   +   ++S    EA   ++ M   +    + ++ A++   A  +D+S  ++   + 
Sbjct: 162 SWNTMVSGLSKSGAVEEAKAVFLAMPVRN----SVSWNAMVSGFACSRDMSAAEEWFRNA 217

Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
            + G       +   +V+ Y   G ++    + F+ +  ++ VSWN+++A   +    D 
Sbjct: 218 PEKG----DAVLWTAMVSGYMDIG-NVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADD 272

Query: 164 ALEAFRMMLY-SNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
           AL  FR M+  +NV+P++ TL SV L CSNLS    L  G+Q+H   +++    N  +  
Sbjct: 273 ALRLFRTMVREANVQPNASTLSSVLLGCSNLS---ALGFGKQIHQWCMKLPLSRNLTVGT 329

Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
           +L++MY K G +  A  LF     RD+V+WN ++S  +Q+    EA+    +M   G++P
Sbjct: 330 SLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP 389

Query: 282 DGVSIASVLPACSHLEMLDTG-------KEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
           + ++  +VL AC H  + D G       +E++    R D         S +VD+ C   +
Sbjct: 390 NWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHY-------SCMVDLLCRAGK 442

Query: 335 VECGRRVFDFI 345
           +E   R  D I
Sbjct: 443 LE---RAVDLI 450



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 137/336 (40%), Gaps = 69/336 (20%)

Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
           D    N L+  +   G  + ++ +F  M VRD VSWNTM++G +  G   +A  +   M 
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM- 186

Query: 480 NMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDV 539
                               P  NS++   ++ G      ++  +E    A       D 
Sbjct: 187 --------------------PVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEK---GDA 223

Query: 540 VVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAE 599
           V+ +A+V  Y   G +  A   F+ MPVRN+++WN ++  Y  +    + L L + MV E
Sbjct: 224 VLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVRE 283

Query: 600 GSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRA 659
            +    V+PN  T  ++   CS+   +  G  +               H  C+   L R 
Sbjct: 284 AN----VQPNASTLSSVLLGCSNLSALGFGKQI---------------HQWCMKLPLSRN 324

Query: 660 GKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLL 719
             V     L++M    + K G  SS   AC++   +   ++ A N  +            
Sbjct: 325 LTV--GTSLVSM----YCKCGDLSS---ACKLFGEMHTRDVVAWNAMI------------ 363

Query: 720 SNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
            + Y+      +A+++ ++MK+ GV  EP  +WI F
Sbjct: 364 -SGYAQHGDGKEAINLFERMKDEGV--EP--NWITF 394


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/780 (32%), Positives = 416/780 (53%), Gaps = 42/780 (5%)

Query: 90  IQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
           ++DL    Q+ A +  Y       TV+ NT+++ Y K G D+     +FD + ++  V+W
Sbjct: 51  VEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMG-DLSSARHLFDAMPDRTVVTW 109

Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGN 208
             ++        +D A + FR M  S   P   T  ++   C++   ++ +    QVH  
Sbjct: 110 TILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVG---QVHAF 166

Query: 209 SLRVG-EWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
           ++++G + N F  + N L+  Y ++ R+D A  LF+   D+D V++NT+++   ++  + 
Sbjct: 167 AVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYT 226

Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
           EA+    +M   G KP   + + VL A   L     G+++H  ++      D S VG+ +
Sbjct: 227 EAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDAS-VGNQI 285

Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL--- 382
           +  Y     V   R +F+ + +     +N +I+ Y Q E  EE+L LF +M+   G    
Sbjct: 286 LHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQ-CMGFDRR 344

Query: 383 -WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
            +P AT +S  + A + S     +  +H  AI        +V N+L+DMY++    + ++
Sbjct: 345 NFPFATMLS--IAANLSSLQVGRQ--VHCQAIVATADSILHVGNSLVDMYAKCEMFDEAE 400

Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
            IF  +  R TVSW  +I+GY   G HG  L L  +M+      +++             
Sbjct: 401 LIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQS------------- 447

Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
               T  TVL      ++L  GK++HA+ IR+    +V  GS LVDMYAKCG +  A +V
Sbjct: 448 ----TFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 503

Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
           F+ MP RN ++WN +I AY  +G+G+  +     M+  G     ++P+ V+ + +  ACS
Sbjct: 504 FEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSG-----LQPDSVSILGVLIACS 558

Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA 681
           H G V +G + F  M   YGI P   HYAC++DLLGR G+  +A +L++ MP E D+   
Sbjct: 559 HCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI-M 617

Query: 682 WSSLLGACRIHQNVEIGEIAAQNLFLLEP-DVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
           WSS+L ACRI++N  + E AA+ LF +E    A+ YV +SNIY++A  W+    V+K M+
Sbjct: 618 WSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMR 677

Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
           E G++K P  SW+E   +IH F + D +H   +++   +  L+  + +EGY PDTS V+ 
Sbjct: 678 ERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQ 737

Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
           +++E+ K   L  HSE+LA+AF +++TP G  I V KNLR C DCH A K ISKI  R I
Sbjct: 738 DIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVI 797



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 253/548 (46%), Gaps = 35/548 (6%)

Query: 40  RCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQI 99
           R   +W   +   A +N F EA   + +M RS   PD   F  +L         +   Q+
Sbjct: 104 RTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQV 163

Query: 100 HAHVVKYGYGLS-SVTVANTLVNMYGKCGSDMWDVYKV-FDRITEKDQVSWNSMIATLCR 157
           HA  VK G+  +  +TV N L+  Y  C     D+  V F+ I +KD V++N++I    +
Sbjct: 164 HAFAVKLGFDTNLFLTVCNVLLKSY--CEVRRLDLACVLFEEILDKDSVTFNTLITGYEK 221

Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
            G +  A+  F  M  S  +PS FT   V  A   L       LG+Q+HG S+  G   +
Sbjct: 222 DGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL---HDFALGQQLHGLSVTTGFSRD 278

Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMAL 276
             + N ++  Y+K  RV + + LF    + D VS+N ++SS SQ +++ E++   R+M  
Sbjct: 279 ASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQC 338

Query: 277 RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL---RNDILIDNSFVGSALVDMYCNCR 333
            G        A++L   ++L  L  G+++H  A+    + IL     VG++LVDMY  C 
Sbjct: 339 MGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSIL----HVGNSLVDMYAKCE 394

Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
             +    +F  +S +    W A+I+GY Q       L LF KM   A L  + +T ++V+
Sbjct: 395 MFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRG-ANLRADQSTFATVL 453

Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
            A     +    + +H   I+ G   + +  + L+DMY++ G I+ +  +F++M  R+ V
Sbjct: 454 KASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 513

Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
           SWN +I+ Y     +GD    +     M +                 +P+S++++ VL  
Sbjct: 514 SWNALISAY---ADNGDGEAAIGAFTKMIQSG--------------LQPDSVSILGVLIA 556

Query: 514 CGALSALAKGKE-IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVI 571
           C     + +G E   A +    +       + ++D+  + G    A ++ D MP   + I
Sbjct: 557 CSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 616

Query: 572 TWNVIIMA 579
            W+ ++ A
Sbjct: 617 MWSSVLNA 624



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 222/438 (50%), Gaps = 22/438 (5%)

Query: 58  FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
           + EAI  +++M +S  +P +F F  VLKAV G+ D +LG+Q+H   V  G+     +V N
Sbjct: 225 YTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFS-RDASVGN 283

Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
            +++ Y K    + +   +F+ + E D VS+N +I++  +  +++ +L  FR M     +
Sbjct: 284 QILHFYSK-HDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342

Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL-RVGEWNTFIMNALMAMYAKLGRVDDA 236
             +F   ++    +NLS    L++GRQVH  ++    +    + N+L+ MYAK    D+A
Sbjct: 343 RRNFPFATMLSIAANLS---SLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEA 399

Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
           + +FKS   R  VSW  ++S   Q       +    +M    ++ D  + A+VL A +  
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459

Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
             L  GK++HA+ +R+  L +N F GS LVDMY  C  ++   +VF+ + D+    WNA+
Sbjct: 460 ASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 518

Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-------SEAFPDKEGIH 409
           I+ Y  N   E A+  F KM + +GL P++ ++  V+ AC         +E F     I+
Sbjct: 519 ISAYADNGDGEAAIGAFTKMIQ-SGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIY 577

Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQH 468
           G   K    +  Y    ++D+  R GR   ++ + D+M    D + W++++    I    
Sbjct: 578 GITPK----KKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQ 631

Query: 469 GDALMLLREMQNMEEEKN 486
             A     ++ +ME+ ++
Sbjct: 632 SLAERAAEQLFSMEKLRD 649



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 151/388 (38%), Gaps = 60/388 (15%)

Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
           P    +    IK G   D    N  ++   R G++  +  ++D+M  ++TVS NTMI+GY
Sbjct: 26  PATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGY 85

Query: 463 TICGQHGDALMLLREMQN--------MEEEKNRNNVYDLDETVLRPK------PNSITLM 508
              G    A  L   M +        +      NN +D    + R        P+ +T  
Sbjct: 86  VKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFT 145

Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATD--VVVGSALVDMYAKCGCLNFARRVFDLMP 566
           T+LPGC          ++HA+A++    T+  + V + L+  Y +   L+ A  +F+ + 
Sbjct: 146 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEIL 205

Query: 567 VRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
            ++ +T+N +I  Y   G   E + L   M   G      KP++ TF  +  A       
Sbjct: 206 DKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGH-----KPSDFTFSGVLKAVVGLHDF 260

Query: 627 SEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
           + G  L + +    G          ++    +  +V +   L N MP             
Sbjct: 261 ALGQQL-HGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMP------------- 306

Query: 687 GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGV-- 744
                                 E D  S+ V++S+ YS A+ +++++++ ++M+ MG   
Sbjct: 307 ----------------------ELDFVSYNVVISS-YSQAEQYEESLNLFREMQCMGFDR 343

Query: 745 RKEPGCSWIEFGDEIHKFLAGDGSHQQS 772
           R  P  + +     +     G   H Q+
Sbjct: 344 RNFPFATMLSIAANLSSLQVGRQVHCQA 371


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.135    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,518,023,349
Number of Sequences: 23463169
Number of extensions: 546743667
Number of successful extensions: 1552899
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7027
Number of HSP's successfully gapped in prelim test: 3974
Number of HSP's that attempted gapping in prelim test: 1314734
Number of HSP's gapped (non-prelim): 66364
length of query: 882
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 730
effective length of database: 8,792,793,679
effective search space: 6418739385670
effective search space used: 6418739385670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)