BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002772
(882 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/873 (68%), Positives = 710/873 (81%), Gaps = 14/873 (1%)
Query: 10 LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMT 69
LL + P S+ + + A S+ + SQ+R E WI+ LRS+ RSN REA+L+Y++M
Sbjct: 32 LLRATPTSATEDVASAVSGAPSIFI--SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI 89
Query: 70 RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD 129
I+PDN+AFPA+LKAVA +QD+ LGKQIHAHV K+GYG+ SVTVANTLVN+Y KCG D
Sbjct: 90 VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-D 148
Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
VYKVFDRI+E++QVSWNS+I++LC F KW++ALEAFR ML NVEPSSFTLVSV A
Sbjct: 149 FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA 208
Query: 190 CSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
CSNL +GL +G+QVH LR GE N+FI+N L+AMY KLG++ +K L SF RDLV
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
+WNT++SSL QN++ LEA+ +LR+M L G++PD +I+SVLPACSHLEML TGKE+HAYA
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
L+N L +NSFVGSALVDMYCNC++V GRRVFD + D+KI LWNAMI GY QNE+D+EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
L+LFI MEE AGL N+TTM+ VVPACVRS AF KE IHG +K GL RDR+VQN LMD
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
MYSR+G+I+I+ IF ME RD V+WNTMITGY H DAL+LL +MQN+E + ++
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG- 507
Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
+ + KPNSITLMT+LP C ALSALAKGKEIHAYAI+N LATDV VGSALVDMY
Sbjct: 508 -----ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
AKCGCL +R+VFD +P +NVITWNVIIMAYGMHG GQE ++LL+ M+ +G VKPN
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-----VKPN 617
Query: 610 EVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLI 669
EVTFI++FAACSHSGMV EG+ +FY MK DYG+EPS DHYACVVDLLGRAG++++AYQL+
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677
Query: 670 NMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLW 729
NMMP +F+KAGAWSSLLGA RIH N+EIGEIAAQNL LEP+VASHYVLL+NIYSSA LW
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW 737
Query: 730 DKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE 789
DKA +VR+ MKE GVRKEPGCSWIE GDE+HKF+AGD SH QSE+L G+LE L ERMRKE
Sbjct: 738 DKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797
Query: 790 GYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQAT 849
GYVPDTSCVLHNV E+EKE LLCGHSEKLAIAFGILNT PGT IRVAKNLRVCNDCH AT
Sbjct: 798 GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857
Query: 850 KFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
KFISKI REIILRDVRRFH FKNGTCSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/767 (41%), Positives = 467/767 (60%), Gaps = 35/767 (4%)
Query: 119 LVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEP 178
LV+++ + GS + + +VF+ I K V +++M+ + D AL+ F M Y +VEP
Sbjct: 75 LVSLFCRYGS-VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 179 SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAK 237
+ + C + + LR+G+++HG ++ G + F M L MYAK +V++A+
Sbjct: 134 VVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
+F +RDLVSWNTIV+ SQN A+ ++ M +KP ++I SVLPA S L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 298 MLDTGKEIHAYALRN--DILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
++ GKEIH YA+R+ D L++ + +ALVDMY C +E R++FD + ++ + WN+
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVN---ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
MI Y QNE +EA+++F KM + G+ P ++ + AC IH +++L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
GL R+ V N+L+ MY + ++ + ++F ++ R VSWN MI G+ G+ DAL
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 476 REMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML 535
+M++ TV KP++ T ++V+ LS K IH +R+ L
Sbjct: 427 SQMRS--------------RTV---KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469
Query: 536 ATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKN 595
+V V +ALVDMYAKCG + AR +FD+M R+V TWN +I YG HG G+ LEL +
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529
Query: 596 MVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDL 655
M + G +KPN VTF+++ +ACSHSG+V G+ FY MK++Y IE S DHY +VDL
Sbjct: 530 M-----QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 656 LGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASH 715
LGRAG++ +A+ I MP + + ++LGAC+IH+NV E AA+ LF L PD +
Sbjct: 585 LGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 716 YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQL 775
+VLL+NIY +A +W+K VR M G+RK PGCS +E +E+H F +G +H S+++
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 776 HGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRV 835
+ FLE L +++ GYVPDT+ VL V + KE LL HSEKLAI+FG+LNT GTTI V
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 762
Query: 836 AKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
KNLRVC DCH ATK+IS + REI++RD++RFHHFKNG CSCGDYW
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 256 bits (654), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 274/526 (52%), Gaps = 28/526 (5%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
L+ A+ + +A+ ++ M D++P + F +LK +L +GK+IH +VK G+
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
L + L NMY KC + + KVFDR+ E+D VSWN+++A + G +ALE
Sbjct: 167 SLDLFAMTG-LENMYAKC-RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMY 227
+ M N++PS T+VSV A S L + +G+++HG ++R G + I AL+ MY
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRL---ISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIA 287
AK G ++ A+ LF +R++VSWN+++ + QN+ EA++ ++M G+KP VS+
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 288 SVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISD 347
L AC+ L L+ G+ IH ++ + + S V S L+ MYC C+EV+ +F +
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS-LISMYCKCKEVDTAASMFGKLQS 400
Query: 348 KKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
+ + WNAMI G+ QN +AL F +M + P+ T SV+ A +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKW 459
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
IHG ++ L ++ +V AL+DMY++ G I I++ IFD M R +WN MI GY G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIH 527
AL L EMQ T+ KPN +T ++V+ C S L +
Sbjct: 520 GKAALELFEEMQK--------------GTI---KPNGVTFLSVISACSH-SGLVEAGLKC 561
Query: 528 AYAIRNMLATDVVVG--SALVDMYAKCGCLNFARRVFDLMPVRNVI 571
Y ++ + ++ + A+VD+ + G LN A MPV+ +
Sbjct: 562 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 222/415 (53%), Gaps = 13/415 (3%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + +++ R A+ M +++P +VL AV+ ++ +S+GK+IH +
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
++ G+ S V ++ LV+MY KCGS + ++FD + E++ VSWNSMI +
Sbjct: 263 MRSGFD-SLVNISTALVDMYAKCGS-LETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
A+ F+ ML V+P+ +++ AC++L L GR +H S+ +G + N ++N+
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLG---DLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
L++MY K VD A ++F + R LVSWN ++ +QN + ++A+ + QM R +KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
+ SV+ A + L + K IH +R+ L N FV +ALVDMY C + R +F
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS--- 399
D +S++ + WNAMI GYG + + + AL LF +M++ + PN T SV+ AC S
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHSGLV 555
Query: 400 EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
EA + + L D Y A++D+ R GR+ + M V+ V+
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 212/430 (49%), Gaps = 25/430 (5%)
Query: 193 LSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
L R L+ RQ+ + G + F L++++ + G VD+A +F+ + + V +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
+T++ ++ +A+ F +M ++P + +L C L GKEIH ++
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 312 NDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
+ +D F + L +MY CR+V R+VFD + ++ + WN ++ GY QN AL
Sbjct: 164 SGFSLD-LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
+ M E L P+ T+ SV+PA + IHG+A++ G + AL+DMY
Sbjct: 223 MVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
++ G +E ++ +FD M R+ VSWN+MI Y +A+++ ++M
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM------------- 328
Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
LDE V KP +++M L C L L +G+ IH ++ L +V V ++L+ MY K
Sbjct: 329 -LDEGV---KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
C ++ A +F + R +++WN +I+ + +G + L M R VKP+
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-----RSRTVKPDTF 439
Query: 612 TFIALFAACS 621
T++++ A +
Sbjct: 440 TYVSVITAIA 449
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 195/379 (51%), Gaps = 28/379 (7%)
Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
A +L CS L+ L ++I +N L F + LV ++C V+ RVF+ I
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNG-LYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
K L++ M+ G+ + ++AL F++M + P + ++ C +
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
IHG +K G D + L +MY++ ++ ++ +FD M RD VSWNT++ GY+
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS--- 212
Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
Q+G A M L +++M EE KP+ IT+++VLP AL ++ GKEI
Sbjct: 213 QNGMARMALEMVKSMCEEN--------------LKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
H YA+R+ + V + +ALVDMYAKCG L AR++FD M RNV++WN +I AY +
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
+E + + + M+ EG VKP +V+ + AC+ G + G +K+ + G++ +
Sbjct: 319 KEAMLIFQKMLDEG-----VKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNV 372
Query: 647 DHYACVVDLLGRAGKVEDA 665
++ + + +V+ A
Sbjct: 373 SVVNSLISMYCKCKEVDTA 391
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 38 QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
Q+R SW + A++ + +A+ + +M ++PD F + +V+ A+A + K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 98 QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
IH V++ +V V LV+MY KCG+ M +FD ++E+ +WN+MI
Sbjct: 459 WIHGVVMRSCLD-KNVFVTTALVDMYAKCGAIMI-ARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSN 192
G ALE F M ++P+ T +SV ACS+
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/846 (37%), Positives = 491/846 (58%), Gaps = 37/846 (4%)
Query: 45 WIESLRSEARSNQFREAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
W + S +R+ + E + ++IEM + +D+ PD+F +P V+KA AG+ D+ +G +H V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
VK G + V V N LV+ YG G + D ++FD + E++ VSWNSMI G +
Sbjct: 214 VKTGL-VEDVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 164 ALEAFRMMLYSNVE----PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFI 219
+ M+ N + P TLV+V C+ R + LG+ VHG ++++ +
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCA---REREIGLGKGVHGWAVKLRLDKELV 328
Query: 220 MN-ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
+N ALM MY+K G + +A+ +FK ++++VSWNT+V S LRQM G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 279 --IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
+K D V+I + +P C H L + KE+H Y+L+ + + N V +A V Y C +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLS 447
Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
+RVF I K + WNA+I G+ Q+ +L ++M+ ++GL P++ T+ S++ AC
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLSAC 506
Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
+ ++ + +HG I+ L RD +V +++ +Y G + + +FD ME + VSWN
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 566
Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
T+ITGY G AL + R+M + + I++M V C
Sbjct: 567 TVITGYLQNGFPDRALGVFRQM-----------------VLYGIQLCGISMMPVFGACSL 609
Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
L +L G+E HAYA++++L D + +L+DMYAK G + + +VF+ + ++ +WN +
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
IM YG+HG +E ++L + M G P+++TF+ + AC+HSG++ EG+ +M
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGH-----NPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724
Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
K +G++P+ HYACV+D+LGRAG+++ A +++ E G W SLL +CRIHQN+E
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
+GE A LF LEP+ +YVLLSN+Y+ W+ VR++M EM +RK+ GCSWIE
Sbjct: 785 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
++ F+ G+ E++ L ++ K GY PDT V H+++EEEK L GHSE
Sbjct: 845 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904
Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
KLA+ +G++ T GTTIRV KNLR+C DCH A K ISK+ REI++RD +RFHHFKNG C
Sbjct: 905 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964
Query: 877 SCGDYW 882
SCGDYW
Sbjct: 965 SCGDYW 970
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 294/628 (46%), Gaps = 51/628 (8%)
Query: 79 AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
A +L+A +D+ +G++IH V + + ++ MY CGS D VFD
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD-DSRFVFD 144
Query: 139 RITEKDQVSWNSMIATLCRFGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRD 197
+ K+ WN++I++ R +D LE F M+ +++ P FT V AC+ +S
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS--- 201
Query: 198 GLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
+ +G VHG ++ G + F+ NAL++ Y G V DA LF +R+LVSWN+++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 257 SLSQNDKFLEAVMFLRQMALR----GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN 312
S N E+ + L +M PD ++ +VLP C+ + GK +H +A++
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK- 320
Query: 313 DILIDNSFV-GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALM 371
+ +D V +AL+DMY C + + +F ++K + WN M+ G+ E D
Sbjct: 321 -LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA-EGDTHGTF 378
Query: 372 LFIKMEEVAG--LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMD 429
++ G + + T+ + VP C P + +H +++K + V NA +
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 430 MYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
Y++ G + ++ +F + + SWN +I G+ Q D + L M+
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH---AQSNDPRLSLDAHLQMK------- 488
Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
+ P+S T+ ++L C L +L GKE+H + IRN L D+ V +++ +Y
Sbjct: 489 -------ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
CG L + +FD M +++++WN +I Y +G L + + MV G ++
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-----IQLC 596
Query: 610 EVTFIALFAACS-----HSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
++ + +F ACS G + L + ++DD I S ++D+ + G +
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS------LIDMYAKNGSITQ 650
Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIH 692
+ ++ N + + +W++++ IH
Sbjct: 651 SSKVFNGLKEK--STASWNAMIMGYGIH 676
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 239/480 (49%), Gaps = 32/480 (6%)
Query: 152 IATLCRFGKWDLALEAFRMMLYSNVEPS-SFTLV--SVALACSNLSRRDGLRLGRQVH-- 206
I+ C G D + + + + S +F LV ++ L +R + +GR++H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 207 -GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
S R+ + + ++ MYA G DD++ +F + ++L WN ++SS S+N+ +
Sbjct: 110 VSGSTRLRN-DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168
Query: 266 EAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSA 324
E + F+ ++ + PD + V+ AC+ + + G +H ++ L+++ FVG+A
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG-LVEDVFVGNA 227
Query: 325 LVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAG--- 381
LV Y V ++FD + ++ + WN+MI + N + EE+ +L +M E G
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
P+ T+ +V+P C R +G+HG A+KL L ++ + NALMDMYS+ G I ++
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPK 501
IF ++ VSWNTM+ G++ G +LR+M E+ K
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED---------------VK 392
Query: 502 PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
+ +T++ +P C S L KE+H Y+++ + +V +A V YAKCG L++A+RV
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 562 FDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
F + + V +WN +I + + + L+ M G + P+ T +L +ACS
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG-----LLPDSFTVCSLLSACS 507
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 143/268 (53%), Gaps = 6/268 (2%)
Query: 36 GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
G +++ SW + A+SN R ++ ++++M S + PD+F ++L A + ++ L L
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 96 GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
GK++H +++ + + V +++++Y CG ++ V +FD + +K VSWN++I
Sbjct: 515 GKEVHGFIIR-NWLERDLFVYLSVLSLYIHCG-ELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGE 214
+ G D AL FR M+ ++ +++ V ACS L LRLGR+ H +L+ + E
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP---SLRLGREAHAYALKHLLE 629
Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
+ FI +L+ MYAK G + + +F +++ SWN ++ + EA+ +M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTG 302
G PD ++ VL AC+H ++ G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEG 717
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/836 (37%), Positives = 481/836 (57%), Gaps = 34/836 (4%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
LR S A+ + DI P +VL+ A + L GK++ + G+
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGF 125
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
+ S + + L MY CG D+ + +VFD + + + WN ++ L + G + ++ F
Sbjct: 126 VIDS-NLGSKLSLMYTNCG-DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR--VGEWNTFIMNALMAM 226
+ M+ S VE S+T V+ + S+L G G Q+HG L+ GE N+ + N+L+A
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHG---GEQLHGFILKSGFGERNS-VGNSLVAF 239
Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
Y K RVD A+ +F +RD++SWN+I++ N + + QM + GI+ D +I
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
SV C+ ++ G+ +H+ ++ ++ F + L+DMY C +++ + VF +S
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMS 358
Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
D+ + + +MI GY + EA+ LF +MEE G+ P+ T+++V+ C R + +
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
+H + LG D +V NALMDMY++ G ++ ++ +F +M V+D +SWNT+I GY+
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
+AL L + EEK R P+ T+ VLP C +LSA KG+EI
Sbjct: 478 YANEALSLFNLLL---EEK-------------RFSPDERTVACVLPACASLSAFDKGREI 521
Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
H Y +RN +D V ++LVDMYAKCG L A +FD + +++++W V+I YGMHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
+E + L M R ++ +E++F++L ACSHSG+V EG F M+ + IEP+
Sbjct: 582 KEAIALFNQM-----RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
+HYAC+VD+L R G + AY+ I MP D A W +LL CRIH +V++ E A+ +F
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPD-ATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
LEP+ +YVL++NIY+ A+ W++ +RK++ + G+RK PGCSWIE ++ F+AGD
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
S+ ++E + FL + RM +EGY P T L + E EKE LCGHSEKLA+A GI++
Sbjct: 756 SSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIIS 815
Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
+ G IRV KNLRVC DCH+ KF+SK+ REI+LRD RFH FK+G CSC +W
Sbjct: 816 SGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 7/261 (2%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
S+ + AR EA+ + EM I PD + AVL A + L GK++H +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+ G + V+N L++MY KCGS M + VF + KD +SWN++I + +
Sbjct: 424 KENDLGF-DIFVSNALMDMYAKCGS-MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 164 ALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMN 221
AL F ++L P T+ V AC++LS D GR++HG +R G + + + N
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK---GREIHGYIMRNGYFSDRHVAN 538
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+L+ MYAK G + A LF +DLVSW +++ + EA+ QM GI+
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598
Query: 282 DGVSIASVLPACSHLEMLDTG 302
D +S S+L ACSH ++D G
Sbjct: 599 DEISFVSLLYACSHSGLVDEG 619
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 570 bits (1468), Expect = e-161, Method: Compositional matrix adjust.
Identities = 330/841 (39%), Positives = 488/841 (58%), Gaps = 35/841 (4%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W +R+ +++ F EA+ Y ++ S + PD + FP+V+KA AG+ D +G ++ ++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
G+ S + V N LV+MY + G + +VFD + +D VSWNS+I+ G ++ A
Sbjct: 134 DMGFE-SDLFVGNALVDMYSRMGL-LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA-L 223
LE + + S + P SFT+ SV A NL ++ G+ +HG +L+ G + ++N L
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLV---VKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPD 282
+AMY K R DA+ +F + RD VS+NT++ + + E+V MFL L KPD
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN--LDQFKPD 306
Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
++++SVL AC HL L K I+ Y L+ +++++ V + L+D+Y C ++ R VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVF 365
Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
+ + K WN++I+GY Q+ EA+ LF KM + + T ++ R
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
+G+H + IK G+ D V NAL+DMY++ G + S IF M DTV+WNT+I+
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
G L + +M+ E P+ T + LP C +L+A
Sbjct: 485 VRFGDFATGLQVTTQMRKSE-----------------VVPDMATFLVTLPMCASLAAKRL 527
Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
GKEIH +R +++ +G+AL++MY+KCGCL + RVF+ M R+V+TW +I AYGM
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587
Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
+GEG++ LE +M G + P+ V FIA+ ACSHSG+V EG+ F KMK Y I
Sbjct: 588 YGEGEKALETFADMEKSG-----IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642
Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
+P +HYACVVDLL R+ K+ A + I MP + D A W+S+L ACR ++E E +
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD-ASIWASVLRACRTSGDMETAERVS 701
Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
+ + L PD + +L SN Y++ + WDK +RK +K+ + K PG SWIE G +H F
Sbjct: 702 RRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 761
Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIA 821
+GD S QSE ++ LE L M KEGY+PD V N+ EEE K L+CGHSE+LAIA
Sbjct: 762 SSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIA 821
Query: 822 FGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDY 881
FG+LNT PGT ++V KNLRVC DCH+ TK ISKI REI++RD RFH FK+GTCSC D
Sbjct: 822 FGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDR 881
Query: 882 W 882
W
Sbjct: 882 W 882
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 185/666 (27%), Positives = 329/666 (49%), Gaps = 42/666 (6%)
Query: 81 PAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI 140
P + +A++ +L+ ++IHA V+ G SS + L++ Y + VF R+
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLD-SSDFFSGKLIDKYSHFREPASSL-SVFRRV 65
Query: 141 TEKDQVS-WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
+ V WNS+I + G + ALE + + S V P +T SV AC+ L +
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE-- 123
Query: 200 RLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
+G V+ L +G E + F+ NAL+ MY+++G + A+ +F RDLVSWN+++S
Sbjct: 124 -MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDN 318
S + + EA+ ++ I PD +++SVLPA +L ++ G+ +H +AL++ +
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 319 SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
V + LV MY R RRVFD + + +N MI GY + E EE++ +F +E
Sbjct: 243 V-VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LEN 299
Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
+ P+ T+SSV+ AC + I+ + +K G + V+N L+D+Y++ G +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
++ +F+ ME +DTVSWN++I+GY G +A+ L + M MEE+ +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH----------- 408
Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
IT + ++ L+ L GK +H+ I++ + D+ V +AL+DMYAKCG + +
Sbjct: 409 ------ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
++F M + +TWN +I A G+ L++ M R EV P+ TF+
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM-----RKSEVVPDMATFLVTLP 517
Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDK 678
C+ G ++ + +G E ++++ + G +E++ ++ M
Sbjct: 518 MCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR--D 574
Query: 679 AGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD--VASHYVLLSNIY--SSAQLWDKAMD 734
W+ ++ A ++ GE A + +E V V ++ IY S + L D+ +
Sbjct: 575 VVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 735 VRKKMK 740
+KMK
Sbjct: 632 CFEKMK 637
Score = 196 bits (498), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 280/584 (47%), Gaps = 52/584 (8%)
Query: 182 TLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF 240
T VS LS L R++H + +G + + F L+ Y+ + ++F
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 241 KSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEML 299
+ +++ WN+I+ + S+N F EA+ F ++ + PD + SV+ AC+ L
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
+ G ++ L D FVG+ALVDMY + R+VFD + + + WN++I+G
Sbjct: 123 EMGDLVYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 360 YGQNEYDEEALMLFIKMEEVAGLW--PNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
Y + Y EEAL ++ E+ W P++ T+SSV+PA +G+HG A+K G+
Sbjct: 182 YSSHGYYEEALEIY---HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
V N L+ MY + R ++ +FD+M+VRD+VS+NTMI GY L L
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY---------LKL--- 286
Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
M EE R + +LD+ KP+ +T+ +VL CG L L+ K I+ Y ++
Sbjct: 287 --EMVEESVRMFLENLDQF----KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
+ V + L+D+YAKCG + AR VF+ M ++ ++WN II Y G+ E ++L K M+
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK-MKDDYGIEPSPDHYACVVDLL 656
E + + +T++ L + + + G L +K I+ S + ++D+
Sbjct: 401 IM-----EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMY 453
Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLE--PDVAS 714
+ G+V D+ ++ + M W++++ AC + G + E PD+A+
Sbjct: 454 AKCGEVGDSLKIFSSMGT--GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
V L S A K +G KE C + FG E
Sbjct: 512 FLVTLPMCASLAA------------KRLG--KEIHCCLLRFGYE 541
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 253/551 (45%), Gaps = 40/551 (7%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + + + EA+ Y E+ S I PD+F +VL A + + G+ +H
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+K S V V N LV MY K D +VFD + +D VS+N+MI C + K ++
Sbjct: 234 LK-SGVNSVVVVNNGLVAMYLKFRRPT-DARRVFDEMDVRDSVSYNTMI---CGYLKLEM 288
Query: 164 ALEAFRMML--YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIM 220
E+ RM L +P T+ SV AC +L RD L L + ++ L+ G + +
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVLRACGHL--RD-LSLAKYIYNYMLKAGFVLESTVR 345
Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
N L+ +YAK G + A+ +F S E +D VSWN+I+S Q+ +EA+ + M + +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
D ++ ++ + L L GK +H+ +++ I ID S V +AL+DMY C EV +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS-VSNALIDMYAKCGEVGDSLK 464
Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSE 400
+F + WN +I+ + L + +M + + + P+ T +P C
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDMATFLVTLPMCASLA 523
Query: 401 AFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMIT 460
A + IH ++ G + + NAL++MYS+ G +E S +F+ M RD V+W MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 461 GYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSAL 520
Y G +G+ L +ME+ P+S+ + ++ C +
Sbjct: 584 AY---GMYGEGEKALETFADMEKSG--------------IVPDSVVFIAIIYACSHSGLV 626
Query: 521 AKG-----KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWN 574
+G K Y I M+ V VD+ ++ ++ A MP++ + W
Sbjct: 627 DEGLACFEKMKTHYKIDPMIEHYACV----VDLLSRSQKISKAEEFIQAMPIKPDASIWA 682
Query: 575 VIIMAYGMHGE 585
++ A G+
Sbjct: 683 SVLRACRTSGD 693
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 558 bits (1437), Expect = e-158, Method: Compositional matrix adjust.
Identities = 301/849 (35%), Positives = 479/849 (56%), Gaps = 33/849 (3%)
Query: 36 GSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL 95
G + + SW+ + +++ EAI + +M I P +AF +VL A I+ L +
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 96 GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
G+Q+H V+K G+ S V N LV++Y G ++ +F ++++D V++N++I L
Sbjct: 307 GEQLHGLVLKLGFS-SDTYVCNALVSLYFHLG-NLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG-LRLGRQVHGNSLRVG- 213
+ G + A+E F+ M +EP S TL S+ +ACS DG L G+Q+H + ++G
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS----ADGTLFRGQQLHAYTTKLGF 420
Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
N I AL+ +YAK ++ A F E ++V WN ++ + D + RQ
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
M + I P+ + S+L C L L+ G++IH+ ++ + + N++V S L+DMY
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLG 539
Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
+++ + + K + W MI GY Q +D++AL F +M + G+ + +++ V
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAV 598
Query: 394 PACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTV 453
AC +A + + IH A G D QNAL+ +YSR G+IE S F+ E D +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
+WN +++G+ G + +AL + M NR + + N+ T + +
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRM-------NREGIDN----------NNFTFGSAVKA 701
Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
+ + +GK++HA + ++ V +AL+ MYAKCG ++ A + F + +N ++W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
N II AY HG G E L+ M+ V+PN VT + + +ACSH G+V +G+ F
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIH-----SNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQ 693
M +YG+ P P+HY CVVD+L RAG + A + I MP + D A W +LL AC +H+
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD-ALVWRTLLSACVVHK 875
Query: 694 NVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWI 753
N+EIGE AA +L LEP+ ++ YVLLSN+Y+ ++ WD R+KMKE GV+KEPG SWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 754 EFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCG 813
E + IH F GD +H ++++H + ++L++R + GYV D +L+ + E+K+ ++
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995
Query: 814 HSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKN 873
HSEKLAI+FG+L+ P I V KNLRVCNDCH KF+SK+ +REII+RD RFHHF+
Sbjct: 996 HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055
Query: 874 GTCSCGDYW 882
G CSC DYW
Sbjct: 1056 GACSCKDYW 1064
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/674 (26%), Positives = 310/674 (45%), Gaps = 43/674 (6%)
Query: 28 TATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAV 87
T T P R + I SE S F+E + +E I+P++ +L+
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDES--FQEKRIDSVE--NRGIRPNHQTLKWLLEGC 94
Query: 88 AGIQ-DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
L G+++H+ ++K G S+ ++ L + Y G D++ +KVFD + E+
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLD-SNGCLSEKLFDFYLFKG-DLYGAFKVFDEMPERTIF 152
Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
+WN MI L F M+ NV P+ T V AC S + Q+H
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV--AFDVVEQIH 210
Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
L G +T + N L+ +Y++ G VD A+ +F +D SW ++S LS+N+
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
EA+ M + GI P + +SVL AC +E L+ G+++H L+ D ++V +AL
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD-TYVCNAL 329
Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
V +Y + + +F +S + +N +I G Q Y E+A+ LF +M + GL P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPD 388
Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
+ T++S+V AC + +H + KLG + ++ AL+++Y++ IE + F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSI 505
+ EV + V WN M+ Y + ++ + R+MQ ++E V PN
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-------------IEEIV----PNQY 491
Query: 506 TLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM 565
T ++L C L L G++IH+ I+ + V S L+DMYAK G L+ A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
++V++W +I Y + + L + M+ G ++ +EV +AC+
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-----IRSDEVGLTNAVSACAGLQA 606
Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG---AW 682
+ EG + + G +V L R GK+E++Y + E +AG AW
Sbjct: 607 LKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAW 660
Query: 683 SSLLGACRIHQNVE 696
++L+ + N E
Sbjct: 661 NALVSGFQQSGNNE 674
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/808 (37%), Positives = 466/808 (57%), Gaps = 35/808 (4%)
Query: 79 AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
+FPA+LKA A ++D+ G ++H+ +VK GY S+ + N LV+MY K D+ ++FD
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAK-NDDLSAARRLFD 241
Query: 139 RITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
EK D V WNS++++ GK LE FR M + P+S+T+VS AC S
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY-- 299
Query: 198 GLRLGRQVHGNSLRVGEWNT--FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
+LG+++H + L+ ++ ++ NAL+AMY + G++ A+ + + + D+V+WN+++
Sbjct: 300 -AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
QN + EA+ F M G K D VS+ S++ A L L G E+HAY +++
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-W 417
Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
N VG+ L+DMY C R F + DK + W +I GY QN+ EAL LF
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
+ + + + + S++ A ++ + IH H ++ GL D +QN L+D+Y +
Sbjct: 478 VAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR 535
Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDE 495
+ + +F+ ++ +D VSW +MI+ + G +A+ L R M E
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV---------------E 580
Query: 496 TVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCL 555
T L +S+ L+ +L +LSAL KG+EIH Y +R + + A+VDMYA CG L
Sbjct: 581 TGL--SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638
Query: 556 NFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIA 615
A+ VFD + + ++ + +I AYGMHG G+ +EL M R V P+ ++F+A
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM-----RHENVSPDHISFLA 693
Query: 616 LFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPE 675
L ACSH+G++ EG M+ +Y +EP P+HY C+VD+LGRA V +A++ + MM E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 676 FDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDV 735
A W +LL ACR H EIGEIAAQ L LEP + VL+SN+++ W+ V
Sbjct: 754 -PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 812
Query: 736 RKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKE-GYVPD 794
R KMK G+ K PGCSWIE ++HKF A D SH +S++++ L ++ ++ +E GYV D
Sbjct: 813 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVAD 872
Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
T VLHNV+E EK +L GHSE++AIA+G+L TP +R+ KNLRVC DCH K +SK
Sbjct: 873 TKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSK 932
Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
+ R+I++RD RFHHF++G CSCGD W
Sbjct: 933 LFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 298/597 (49%), Gaps = 39/597 (6%)
Query: 70 RSDIQPDNF---AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
R D+ +N AF VL+ + +S G+Q+H+ + K +A LV MYGKC
Sbjct: 70 RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129
Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
GS + D KVFD + ++ +WN+MI G+ AL + M V + ++
Sbjct: 130 GS-LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFED 245
AC+ L RD +R G ++H +++G +T FI+NAL++MYAK + A+ LF F++
Sbjct: 189 LKACAKL--RD-IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 246 R-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
+ D V WN+I+SS S + K LE + R+M + G P+ +I S L AC GKE
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 305 IHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
IHA L++ +V +AL+ MY C ++ R+ +++ + WN++I GY QN
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQ 424
+EAL F M AG + +M+S++ A R +H + IK G + V
Sbjct: 366 MYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
N L+DMYS+ F M +D +SW T+I GY H +AL L R++ E
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
+DE +L ++L L ++ KEIH + +R L D V+ +
Sbjct: 485 --------IDEMILG---------SILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526
Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
LVD+Y KC + +A RVF+ + ++V++W +I + ++G E +EL + MV G
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG---- 582
Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPS-----PDHYACVVDL 655
+ + V + + +A + +++G ++ Y ++ + +E S D YAC DL
Sbjct: 583 -LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/842 (36%), Positives = 481/842 (57%), Gaps = 44/842 (5%)
Query: 55 SNQFREAILSYIEMTRSDIQP-DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSV 113
+ R A+ + M R I+P D+ F ++LK+ +D LGK +HA ++++ SV
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 114 TVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
+ N+L+++Y K G + DV++ R ++D VSW++M+A G+ A++ F
Sbjct: 99 -LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAK 229
L + P+ + +V ACSN D + +GR G ++ G E + + +L+ M+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSN---SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 230 -LGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
++A +F + ++V+W +++ Q EA+ F M L G + D +++S
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR---EVECGRRVFDFI 345
V AC+ LE L GK++H++A+R+ ++ D V +LVDMY C V+ R+VFD +
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 346 SDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
D + W A+ITGY +N EA+ LF +M + PN T SS AC
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
+ + G A K GL + V N+++ M+ + R+E ++ F+ + ++ VS+NT + G
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
A LL E+ E ++ T ++L G + ++ KG+
Sbjct: 452 NLNFEQAFKLLSEITERE-----------------LGVSAFTFASLLSGVANVGSIRKGE 494
Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
+IH+ ++ L+ + V +AL+ MY+KCG ++ A RVF+ M RNVI+W +I + HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
VLE M+ EG VKPNEVT++A+ +ACSH G+VSEG F M +D+ I+P
Sbjct: 555 FAIRVLETFNQMIEEG-----VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
+HYAC+VDLL RAG + DA++ IN MP + D W + LGACR+H N E+G++AA+
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD-VLVWRTFLGACRVHSNTELGKLAARK 668
Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
+ L+P+ + Y+ LSNIY+ A W+++ ++R+KMKE + KE GCSWIE GD+IHKF
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV 728
Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKET----LLCGHSEKLAI 820
GD +H + Q++ L+ L +++ GYVPDT VLH + EE E LL HSEK+A+
Sbjct: 729 GDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAV 788
Query: 821 AFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
AFG+++T +RV KNLRVC DCH A K+IS + REI+LRD+ RFHHFK+G CSC D
Sbjct: 789 AFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCND 848
Query: 881 YW 882
YW
Sbjct: 849 YW 850
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 296/603 (49%), Gaps = 38/603 (6%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + + + +AI ++E + P+++ + AV++A + + +G+ +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+K G+ S V V +L++M+ K + + YKVFD+++E + V+W MI + G
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNAL 223
A+ F M+ S E FTL SV AC+ L + L LG+Q+H ++R G + + +L
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAEL---ENLSLGKQLHSWAIRSGLVDD-VECSL 308
Query: 224 MAMYAKL---GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF-LEAVMFLRQMALRG- 278
+ MYAK G VDD + +F ED ++SW +++ +N EA+ +M +G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
++P+ + +S AC +L GK++ A + L NS V ++++ M+ +E
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDA 427
Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
+R F+ +S+K + +N + G +N E+A L ++ E L +A T +S++
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVAN 486
Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
+ E IH +KLGL ++ V NAL+ MYS+ G I+ + +F+ ME R+ +SW +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
ITG+ +HG A+ +L M EE KPN +T + +L C +
Sbjct: 547 ITGF---AKHGFAIRVLETFNQMIEEG--------------VKPNEVTYVAILSACSHVG 589
Query: 519 ALAKG-KEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVI 576
+++G + ++ + + + + +VD+ + G L A + MP + +V+ W
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649
Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE-VTFIALFAACSHSGMVSEGMDLFYK 635
+ A +H + L + A + E+ PNE +I L + +G E ++ K
Sbjct: 650 LGACRVHSNTE-----LGKLAAR--KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRK 702
Query: 636 MKD 638
MK+
Sbjct: 703 MKE 705
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 540 bits (1391), Expect = e-152, Method: Compositional matrix adjust.
Identities = 320/880 (36%), Positives = 476/880 (54%), Gaps = 87/880 (9%)
Query: 51 SEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGL 110
+ A+S+Q+ + +S + +I P P + K + +S K IH ++ +G +
Sbjct: 10 AAAKSHQYIK--VSLFSTSAPEITP-----PFIHKC----KTISQVKLIHQKLLSFG--I 56
Query: 111 SSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--VSWNSMIATLCRFGKWDLALEAF 168
++ + + L++ Y G + + R D WNS+I + G + L F
Sbjct: 57 LTLNLTSHLISTYISVGC-LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF 115
Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMY 227
+M + P ++T V AC +S +R G H SL G N F+ NAL+AMY
Sbjct: 116 GLMHSLSWTPDNYTFPFVFKACGEIS---SVRCGESAHALSLVTGFISNVFVGNALVAMY 172
Query: 228 AKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSI 286
++ + DA+ +F D+VSWN+I+ S ++ K A+ MF R G +PD +++
Sbjct: 173 SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITL 232
Query: 287 ASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFIS 346
+VLP C+ L GK++H +A+ ++ +I N FVG+ LVDMY C ++ VF +S
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSE-MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEE---------------------------- 378
K + WNAM+ GY Q E+A+ LF KM+E
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 379 ------VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-------GLGRDRYVQN 425
+G+ PN T+ SV+ C A + IH +AIK G G + V N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 426 ALMDMYSRMGRIEISKTIFDDM--EVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEE 483
L+DMY++ +++ ++ +FD + + RD V+W MI GY+ QHGDA L + M E
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS---QHGDANKALELLSEMFE 468
Query: 484 EKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNML-ATDVVVG 542
E + +PN+ T+ L C +L+AL GK+IHAYA+RN A + V
Sbjct: 469 ED------------CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
+ L+DMYAKCG ++ AR VFD M +N +TW ++ YGMHG G+E L + M G
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-- 574
Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKV 662
K + VT + + ACSHSGM+ +GM+ F +MK +G+ P P+HYAC+VDLLGRAG++
Sbjct: 575 ---FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 663 EDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNI 722
A +LI MP E W + L CRIH VE+GE AA+ + L + Y LLSN+
Sbjct: 632 NAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 723 YSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENL 782
Y++A W +R M+ GV+K PGCSW+E F GD +H +++++ L +
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDH 750
Query: 783 SERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVC 842
+R++ GYVP+T LH+V++EEK+ LL HSEKLA+A+GIL TP G IR+ KNLRVC
Sbjct: 751 MQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVC 810
Query: 843 NDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
DCH A ++S+I +IILRD RFHHFKNG+CSC YW
Sbjct: 811 GDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 249 bits (637), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 293/610 (48%), Gaps = 84/610 (13%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W +RS + + + + M PDN+ FP V KA I + G+ HA +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
G+ +S+V V N LV MY +C S + D KVFD ++ D VSWNS+I + + GK +A
Sbjct: 155 VTGF-ISNVFVGNALVAMYSRCRS-LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 165 LEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNA 222
LE F RM P + TLV+V C++L LG+Q+H ++ N F+ N
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS---LGKQLHCFAVTSEMIQNMFVGNC 269
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL----------- 271
L+ MYAK G +D+A T+F + +D+VSWN +V+ SQ +F +AV
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 272 ------------------------RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
RQM GIKP+ V++ SVL C+ + L GKEIH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 308 YALRNDILI------DNSFVGSALVDMYCNCREVECGRRVFDFISDKK--IALWNAMITG 359
YA++ I + D + V + L+DMY C++V+ R +FD +S K+ + W MI G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 360 YGQNEYDEEALMLFIKM-EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
Y Q+ +AL L +M EE PNA T+S + AC A + IH +A++
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 419 R-DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
+V N L+DMY++ G I ++ +FD+M ++ V+W +++TGY + G +AL + E
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
M+ + + LD +TL+ VL C + +G E Y R
Sbjct: 570 MRRIG--------FKLD---------GVTLLVVLYACSHSGMIDQGME---YFNRMKTVF 609
Query: 538 DVVVG----SALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGE------- 585
V G + LVD+ + G LN A R+ + MP+ + W + +HG+
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 586 GQEVLELLKN 595
+++ EL N
Sbjct: 670 AEKITELASN 679
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 20/275 (7%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
+W ++ A+ EA+ +M S I+P+ +VL A + L GK+IH +
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 104 VKY-------GYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRIT--EKDQVSWNSMIAT 154
+KY G+G ++ + N L++MY KC + +FD ++ E+D V+W MI
Sbjct: 392 IKYPIDLRKNGHGDENMVI-NQLIDMYAKC-KKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 155 LCRFGKWDLALEAFRMMLYSNVE--PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRV 212
+ G + ALE M + + P++FT+ +AC++L+ LR+G+Q+H +LR
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA---ALRIGKQIHAYALR- 505
Query: 213 GEWNT---FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
+ N F+ N L+ MYAK G + DA+ +F + ++ V+W ++++ + EA+
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
+M G K DGV++ VL ACSH M+D G E
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/855 (36%), Positives = 483/855 (56%), Gaps = 48/855 (5%)
Query: 37 SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
S R +ES+I L +R + +EA ++ + R ++ D F +VLK A + D G
Sbjct: 53 SPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG 112
Query: 97 KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
+Q+H +K+G+ L V+V +LV+ Y K GS+ D KVFD + E++ V+W ++I+
Sbjct: 113 RQLHCQCIKFGF-LDDVSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
R D L F M +P+SFT A A L+ G QVH ++ G
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTF---AAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 217 TF-IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
T + N+L+ +Y K G V A+ LF E + +V+WN+++S + N LEA+ M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
L ++ S ASV+ C++L+ L +++H ++ L D + + +AL+ Y C +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-IRTALMVAYSKCTAM 346
Query: 336 ECGRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS---S 391
R+F I + W AMI+G+ QN+ EEA+ LF +M+ G+ PN T S +
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYSVILT 405
Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
+P SE +H +K R V AL+D Y ++G++E + +F ++ +D
Sbjct: 406 ALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
V+W+ M+ GY G+ A+ + E+ T KPN T ++L
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGEL-----------------TKGGIKPNEFTFSSIL 501
Query: 512 PGCGALSA-LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
C A +A + +GK+ H +AI++ L + + V SAL+ MYAK G + A VF +++
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
++WN +I Y HG+ + L++ K M + +VK + VTFI +FAAC+H+G+V EG
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEM-----KKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGA--WSSLLGA 688
F M D I P+ +H +C+VDL RAG++E A ++I MP + AG+ W ++L A
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP---NPAGSTIWRTILAA 673
Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
CR+H+ E+G +AA+ + ++P+ ++ YVLLSN+Y+ + W + VRK M E V+KEP
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733
Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
G SWIE ++ + FLAGD SH +Q++ LE+LS R++ GY PDTS VL ++++E KE
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKE 793
Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
+L HSE+LAIAFG++ TP G+ + + KNLRVC DCH K I+KIE REI++RD RF
Sbjct: 794 AVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRF 853
Query: 869 HHF-KNGTCSCGDYW 882
HHF +G CSCGD+W
Sbjct: 854 HHFSSDGVCSCGDFW 868
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 289/731 (39%), Positives = 432/731 (59%), Gaps = 41/731 (5%)
Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
G++ L+ F M+ S+VE T + L + + D L LG+QVH +L++G +
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFI---LMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
+ N+L+ MY KL + A+T+F + +RDL+SWN++++ ++QN +EAV Q+
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 278 GIKPDGVSIASVLPACSHL-EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR--- 333
G+KPD ++ SVL A S L E L K++H +A++ + + D SFV +AL+D Y R
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD-SFVSTALIDAYSRNRCMK 469
Query: 334 --EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
E+ R FD ++ WNAM+ GY Q+ + L LF M + G + T+++
Sbjct: 470 EAEILFERHNFDLVA------WNAMMAGYTQSHDGHKTLKLFALMHK-QGERSDDFTLAT 522
Query: 392 VVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
V C A + +H +AIK G D +V + ++DMY + G + ++ FD + V D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVL 511
V+W TMI+G G+ A + +M+ M VL P+ T+ T+
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLM--------------GVL---PDEFTIATLA 625
Query: 512 PGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI 571
L+AL +G++IHA A++ D VG++LVDMYAKCG ++ A +F + + N+
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 572 TWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMD 631
WN +++ HGEG+E L+L K M + G +KP++VTFI + +ACSHSG+VSE
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLG-----IKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRI 691
M DYGI+P +HY+C+ D LGRAG V+ A LI M E A + +LL ACR+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME-ASASMYRTLLAACRV 799
Query: 692 HQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
+ E G+ A L LEP +S YVLLSN+Y++A WD+ R MK V+K+PG S
Sbjct: 800 QGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859
Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
WIE ++IH F+ D S++Q+E ++ ++++ +++EGYVP+T L +V EEEKE L
Sbjct: 860 WIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERAL 919
Query: 812 CGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHF 871
HSEKLA+AFG+L+TPP T IRV KNLRVC DCH A K+I+K+ +REI+LRD RFH F
Sbjct: 920 YYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979
Query: 872 KNGTCSCGDYW 882
K+G CSCGDYW
Sbjct: 980 KDGICSCGDYW 990
Score = 216 bits (549), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 289/577 (50%), Gaps = 52/577 (9%)
Query: 55 SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
S Q+ + + +M SD++ D F +L + L+LG+Q+H +K G L +T
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM-LT 351
Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
V+N+L+NMY K VFD ++E+D +SWNS+IA + + G A+ F +L
Sbjct: 352 VSNSLINMYCKL-RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRV 233
++P +T+ SV A S+L +GL L +QVH +++++ ++F+ AL+ Y++ +
Sbjct: 411 GLKPDQYTMTSVLKAASSLP--EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
+A+ LF+ + DLV+WN +++ +Q+ + + M +G + D ++A+V C
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 294 SHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALW 353
L ++ GK++HAYA+++ +D +V S ++DMY C ++ + FD I W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 354 NAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI 413
MI+G +N +E A +F +M + G+ P+ T++++ A A IH +A+
Sbjct: 587 TTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 414 KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALM 473
KL D +V +L+DMY++ G I+ + +F +E+ + +WN M+ G G+ + L
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 474 LLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC---GALS-ALAKGKEIHA- 528
L ++M++ L KP+ +T + VL C G +S A + +H
Sbjct: 706 LFKQMKS-----------------LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQ 587
Y I+ ++ S L D + G + A + + M + + + ++ A + G+ +
Sbjct: 749 YGIK----PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Query: 588 -------EVLE----------LLKNMVAEGSRGGEVK 607
++LE LL NM A S+ E+K
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMK 841
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 217/434 (50%), Gaps = 21/434 (4%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAH 102
SW + A++ EA+ ++++ R ++PD + +VLKA + + + LSL KQ+H H
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
+K +S V+ L++ Y + M + +F+R D V+WN+M+A +
Sbjct: 443 AIKIN-NVSDSFVSTALIDAYSR-NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGH 499
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
L+ F +M FTL +V C L + G+QVH +++ G + + ++ +
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLF---AINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
++ MY K G + A+ F S D V+W T++S +N + A QM L G+ P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D +IA++ A S L L+ G++IHA AL+ + ++ FVG++LVDMY C ++ +
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNC-TNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----V 397
F I I WNAM+ G Q+ +E L LF +M+ + G+ P+ T V+ AC +
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL-GIKPDKVTFIGVLSACSHSGL 734
Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
SEA+ +HG G+ + + L D R G ++ ++ + + M + + S +
Sbjct: 735 VSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 457 TMITGYTICGQHGD 470
T++ C GD
Sbjct: 792 TLLAA---CRVQGD 802
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/613 (23%), Positives = 268/613 (43%), Gaps = 88/613 (14%)
Query: 92 DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
DL LGK HA ++ + + N L++MY KCGS + +VFD++ ++D VSWNS+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLI-NNLISMYSKCGSLTY-ARRVFDKMPDRDLVSWNSI 111
Query: 152 IATL-----CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
+A C A FR++ V S TL + C + + H
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY---VWASESFH 168
Query: 207 GNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFL 265
G + ++G + + F+ AL+ +Y K G+V + K LF+ RD+V WN ++ + +L
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA------YL 222
Query: 266 EAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
E G K + + ++S + +G + LR I +
Sbjct: 223 EM----------GFKEEAIDLSSAFHS--------SGLNPNEITLRLLARISGDDSDAGQ 264
Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
V + N + S +I N ++ Y + L F M E + + +
Sbjct: 265 VKSFANGNDAS---------SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE-SDVECD 314
Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
T ++ V+ ++ + +H A+KLGL V N+L++MY ++ + ++T+FD
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR--PKPN 503
+M RD +SWN++I G G +A+ L ++ LR KP+
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-------------------LRCGLKPD 415
Query: 504 SITLMTVLPGCGAL-SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLN-----F 557
T+ +VL +L L+ K++H +AI+ +D V +AL+D Y++ C+ F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
R FDL + WN ++ Y +G + L+L M +G R ++ T +F
Sbjct: 476 ERHNFDL------VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-----DDFTLATVF 524
Query: 618 AACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEF 676
C +++G + Y +K Y ++ + ++D+ + G + A + +P
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 677 DKAGAWSSLLGAC 689
D AW++++ C
Sbjct: 583 DV--AWTTMISGC 593
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
S L GK HA + + + + L+ MY+KCG L +ARRVFD MP R++++WN I+
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 578 MAYGMHGEG-----QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDL 632
AY E Q+ L + + R V + +T + C HSG V +
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRIL-----RQDVVYTSRMTLSPMLKLCLHSGYVWAS-ES 166
Query: 633 FYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
F+ G++ +V++ + GKV++ L MP + W+ +L A
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKA 220
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/727 (36%), Positives = 412/727 (56%), Gaps = 61/727 (8%)
Query: 192 NLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
N +R +Q+H +R + + ++++Y L + +A LFK+ + +++W
Sbjct: 14 NPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
+++ + F +A+ +M G PD SVL +C+ + L G+ +H + +R
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 312 NDILIDNSFVGSALVDMYCNC----REVECG----------------------------- 338
+ D + G+AL++MY ++ G
Sbjct: 134 LGMDCD-LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 339 ---RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
RRVF+ + K + +N +I GY Q+ E+AL + +M L P++ T+SSV+P
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPI 251
Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
+ IHG+ I+ G+ D Y+ ++L+DMY++ RIE S+ +F + RD +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
N+++ GY G++ +AL L R+M + KP ++ +V+P C
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQM-----------------VTAKVKPGAVAFSSVIPACA 354
Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
L+ L GK++H Y +R +++ + SALVDMY+KCG + AR++FD M V + ++W
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
IIM + +HG G E + L + M +G VKPN+V F+A+ ACSH G+V E F
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQG-----VKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
M YG+ +HYA V DLLGRAGK+E+AY I+ M E WS+LL +C +H+N+
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE-PTGSVWSTLLSSCSVHKNL 528
Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
E+ E A+ +F ++ + YVL+ N+Y+S W + +R +M++ G+RK+P CSWIE
Sbjct: 529 ELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
++ H F++GD SH ++++ FL+ + E+M KEGYV DTS VLH+V+EE K LL GHS
Sbjct: 589 KNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHS 648
Query: 816 EKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGT 875
E+LA+AFGI+NT PGTTIRV KN+R+C DCH A KFISKI REII+RD RFHHF G
Sbjct: 649 ERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGN 708
Query: 876 CSCGDYW 882
CSCGDYW
Sbjct: 709 CSCGDYW 715
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 237/459 (51%), Gaps = 44/459 (9%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
+W +R + F +A+ S++EM S PD+ FP+VLK+ + DL G+ +H +
Sbjct: 72 AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131
Query: 104 VKYGYGLSSVTVANTLVNMYGKC---GS-----DMWD----------------------- 132
V+ G T N L+NMY K GS +++D
Sbjct: 132 VRLGMDCDLYT-GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 133 ----VYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
V +VF+ + KD VS+N++IA + G ++ AL R M ++++P SFTL SV
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRD 247
S D ++ G+++HG +R G + + +I ++L+ MYAK R++D++ +F RD
Sbjct: 251 IFSEYV--DVIK-GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 248 LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
+SWN++V+ QN ++ EA+ RQM +KP V+ +SV+PAC+HL L GK++H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
Y LR N F+ SALVDMY C ++ R++FD ++ W A+I G+ + +
Sbjct: 368 YVLRGG-FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL-GLGRDRYVQNA 426
EA+ LF +M+ G+ PN +V+ AC + G K+ GL ++ A
Sbjct: 427 EAVSLFEEMKR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTI 464
+ D+ R G++E + M V T S W+T+++ ++
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 204/444 (45%), Gaps = 66/444 (14%)
Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFI 345
I +++ + ++ K++HA +R L S S ++ +Y N + + +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKTL 65
Query: 346 SDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
+ W ++I + +AL F++M +G P+ SV+ +C
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 406 EGIHGHAIKLGLGRDRYVQNALMDMYSR---MGR-------------------------- 436
E +HG ++LG+ D Y NALM+MY++ MG
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 437 -------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNN 489
I+ + +F+ M +D VS+NT+I GY G + DAL ++REM
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM----------G 234
Query: 490 VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMY 549
DL KP+S TL +VLP + KGKEIH Y IR + +DV +GS+LVDMY
Sbjct: 235 TTDL-------KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 550 AKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPN 609
AK + + RVF + R+ I+WN ++ Y +G E L L + MV +VKP
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-----AKVKPG 342
Query: 610 EVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
V F ++ AC+H + G L Y ++ +G + + +VD+ + G ++ A ++
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKI 400
Query: 669 INMMPPEFDKAGAWSSLLGACRIH 692
+ M D+ +W++++ +H
Sbjct: 401 FDRMNV-LDEV-SWTAIIMGHALH 422
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 39/271 (14%)
Query: 37 SQTRCKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLS 94
S+ C++ SW + ++ ++ EA+ + +M + ++P AF +V+ A A + L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 95 LGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIAT 154
LGKQ+H +V++ G+G S++ +A+ LV+MY KCG ++ K+FDR+ D+VSW ++I
Sbjct: 361 LGKQLHGYVLRGGFG-SNIFIASALVDMYSKCG-NIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 155 LCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE 214
G A+ F M V+P+ V+V ACS++ D
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD---------------EA 463
Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
W F N++ +Y +++L + + L + K EA F+ +M
Sbjct: 464 WGYF--NSMTKVYGL---------------NQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
++P G +++L +CS + L+ +++
Sbjct: 507 C---VEPTGSVWSTLLSSCSVHKNLELAEKV 534
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust.
Identities = 282/788 (35%), Positives = 441/788 (55%), Gaps = 36/788 (4%)
Query: 98 QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
Q HA ++ +G+ + +++ L G+ ++ +F + D +N ++
Sbjct: 38 QTHAQIILHGFR-NDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFNVLMRGFSV 95
Query: 158 FGKWDLALEAFRMMLYS-NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
+L F + S +++P+S T + A++ ++ R D R GR +HG ++ G +
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTY-AFAISAASGFRDD--RAGRVIHGQAVVDGCDS 152
Query: 217 TFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
++ + ++ MY K RV+DA+ +F ++D + WNT++S +N+ ++E++ R +
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 276 LRG-IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
+ D ++ +LPA + L+ L G +IH+ A + + +V + + +Y C +
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLTGFISLYSKCGK 271
Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
++ G +F I +NAMI GY N E +L LF ++ ++G ++T+ S+VP
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSLVP 330
Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
S IHG+ +K V AL +YS++ IE ++ +FD+ + S
Sbjct: 331 V---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 455 WNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
WN MI+GYT G DA+ L REMQ E PN +T+ +L C
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSE-----------------FSPNPVTITCILSAC 430
Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
L AL+ GK +H + + V +AL+ MYAKCG + ARR+FDLM +N +TWN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
+I YG+HG+GQE L + M+ G + P VTF+ + ACSH+G+V EG ++F
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSG-----ITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
M YG EPS HYAC+VD+LGRAG ++ A Q I M E + W +LLGACRIH++
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE-PGSSVWETLLGACRIHKD 604
Query: 695 VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIE 754
+ ++ LF L+PD ++VLLSNI+S+ + + +A VR+ K+ + K PG + IE
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Query: 755 FGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGH 814
G+ H F +GD SH Q ++++ LE L +MR+ GY P+T LH+V EEE+E ++ H
Sbjct: 665 IGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVH 724
Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
SE+LAIAFG++ T PGT IR+ KNLRVC DCH TK ISKI R I++RD RFHHFK+G
Sbjct: 725 SERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDG 784
Query: 875 TCSCGDYW 882
CSCGDYW
Sbjct: 785 VCSCGDYW 792
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 202/438 (46%), Gaps = 28/438 (6%)
Query: 37 SQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
S R E ++ES++ FR+ I S + D +L AVA +Q+L LG
Sbjct: 193 SGYRKNEMYVESIQV------FRDLI------NESCTRLDTTTLLDILPAVAELQELRLG 240
Query: 97 KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
QIH+ K G S V +++Y KCG +F + D V++N+MI
Sbjct: 241 MQIHSLATKTG-CYSHDYVLTGFISLYSKCGKIKMGS-ALFREFRKPDIVAYNAMIHGYT 298
Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW- 215
G+ +L+L F+ ++ S S TLVS+ + L L +HG L+
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH------LMLIYAIHGYCLKSNFLS 352
Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
+ + AL +Y+KL ++ A+ LF ++ L SWN ++S +QN +A+ R+M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
P+ V+I +L AC+ L L GK +H +R+ + +V +AL+ MY C +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
RR+FD ++ K WN MI+GYG + +EAL +F +M +G+ P T V+ A
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPTPVTFLCVLYA 530
Query: 396 CVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS 454
C + + + I I + G ++D+ R G ++ + + M + S
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 455 -WNTMITGYTICGQHGDA 471
W T++ C H D
Sbjct: 591 VWETLLGA---CRIHKDT 605
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/750 (35%), Positives = 421/750 (56%), Gaps = 96/750 (12%)
Query: 204 QVHGNSLRVGEWNT-FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
Q H L+ G N +I L+A Y+ +DA + +S D + S+++++ +L++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
F +++ +M G+ PD + ++ C+ L GK+IH + + + +D +FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD-AFVQ 154
Query: 323 SALVDMYCNCREVECGRRVFDFISDK---------------------------------- 348
++ MY C + R+VFD +SDK
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 349 -KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
I WN +++G+ ++ Y +EA+++F K+ + G P+ T+SSV+P+ SE
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD---------------- 451
IHG+ IK GL +D+ V +A++DMY + G + ++F+ E+ +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 452 -------------------TVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYD 492
VSW ++I G G+ +AL L REMQ
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ------------- 380
Query: 493 LDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKC 552
V KPN +T+ ++LP CG ++AL G+ H +A+R L +V VGSAL+DMYAKC
Sbjct: 381 ----VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436
Query: 553 GCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVT 612
G +N ++ VF++MP +N++ WN ++ + MHG+ +EV+ + ++++ +KP+ ++
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-----RLKPDFIS 491
Query: 613 FIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMM 672
F +L +AC G+ EG F M ++YGI+P +HY+C+V+LLGRAGK+++AY LI M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 673 PPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKA 732
P E D W +LL +CR+ NV++ EIAA+ LF LEP+ YVLLSNIY++ +W +
Sbjct: 552 PFEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 733 MDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYV 792
+R KM+ +G++K PGCSWI+ + ++ LAGD SH Q +Q+ ++ +S+ MRK G+
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 793 PDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFI 852
P+ LH+V E+E+E +L GHSEKLA+ FG+LNTP GT ++V KNLR+C DCH KFI
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730
Query: 853 SKIESREIILRDVRRFHHFKNGTCSCGDYW 882
S REI +RD RFHHFK+G CSCGD+W
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 244/545 (44%), Gaps = 104/545 (19%)
Query: 98 QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
Q HA ++K G + ++ L+ Y D V I + S++S+I L +
Sbjct: 36 QAHARILKSG-AQNDGYISAKLIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 158 FGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
+ ++ F M + P S L ++ C+ LS ++G+Q+H S G + +
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS---AFKVGKQIHCVSCVSGLDMD 150
Query: 217 TFIMNALMAMYAKLGRVDDAKTLFKSFEDRD----------------------------- 247
F+ ++ MY + GR+ DA+ +F D+D
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 248 ------LVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301
+VSWN I+S +++ EAV+ +++ G PD V+++SVLP+ EML+
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 302 GKEIHAYALRNDILIDNSFVGSALVDMY-----------------------CNCREVECG 338
G+ IH Y ++ +L D + SA++DMY CN
Sbjct: 271 GRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 339 R--------RVFDFISDKKIAL----WNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA 386
R +F+ ++ + L W ++I G QN D EAL LF +M+ VAG+ PN
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ-VAGVKPNH 388
Query: 387 TTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDD 446
T+ S++PAC A HG A+++ L + +V +AL+DMY++ GRI +S+ +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 447 MEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
M ++ V WN+++ G+++ HG A +E+ ++ E R R KP+ I+
Sbjct: 449 MPTKNLVCWNSLMNGFSM---HGKA----KEVMSIFESLMRT----------RLKPDFIS 491
Query: 507 LMTVLPGCGALSALAKGKEI-----HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRV 561
++L CG + +G + Y I+ L S +V++ + G L A +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCMVNLLGRAGKLQEAYDL 547
Query: 562 FDLMP 566
MP
Sbjct: 548 IKEMP 552
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 78/415 (18%)
Query: 53 ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
++ F ++I + M + PD+ P + K A + +GKQIH G + +
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQ--------------------------- 145
V ++ +MY +CG M D KVFDR+++KD
Sbjct: 152 F-VQGSMFHMYMRCGR-MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 146 --------VSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
VSWN +++ R G A+ F+ + + P T+ SV ++ +
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL---PSVGDSE 266
Query: 198 GLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFE------------ 244
L +GR +HG ++ G + +++A++ MY K G V +LF FE
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 245 -----------------------DRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+ ++VSW +I++ +QN K +EA+ R+M + G+KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
+ V+I S+LPAC ++ L G+ H +A+R L+DN VGSAL+DMY C + + V
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIV 445
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
F+ + K + WN+++ G+ + +E + +F + L P+ + +S++ AC
Sbjct: 446 FNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSAC 499
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 43/296 (14%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW L RS +EA++ + ++ PD +VL +V + L++G+ IH +V
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS----------------------------------- 128
+K G L V + +++MYGK G
Sbjct: 279 IKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 129 -DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
+M++++K ++ E + VSW S+IA + GK ALE FR M + V+P+ T+ S+
Sbjct: 338 LEMFELFK--EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 188 LACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDR 246
AC N++ L GR HG ++RV N + +AL+ MYAK GR++ ++ +F +
Sbjct: 396 PACGNIA---ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 247 DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
+LV WN++++ S + K E + + +KPD +S S+L AC + + D G
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + A++ + EA+ + EM + ++P++ P++L A I L G+ H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
V+ + L +V V + L++MY KCG ++ + VF+ + K+ V WNS++ GK
Sbjct: 415 VRV-HLLDNVHVGSALIDMYAKCGRINLSQI--VFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDG----LRLGRQVHGNSLRVGEWNTF 218
+ F ++ + ++P + S+ AC + D ++ + +G R+ +
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--- 528
Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
+ ++ + + G++ +A L K + D W +++S
Sbjct: 529 --SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/683 (37%), Positives = 400/683 (58%), Gaps = 29/683 (4%)
Query: 203 RQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQN 261
+Q+H L +G +++ F++ L+ + G + A+ +F + WN I+ S+N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 262 DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV 321
+ F +A++ M L + PD + +L ACS L L G+ +HA R D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD-VFV 156
Query: 322 GSALVDMYCNCREVECGRRVFDFIS--DKKIALWNAMITGYGQNEYDEEALMLFIKMEEV 379
+ L+ +Y CR + R VF+ + ++ I W A+++ Y QN EAL +F +M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 380 AGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
+ P+ + SV+ A + IH +K+GL + + +L MY++ G++
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
+K +FD M+ + + WN MI+GY G +A+ + EM N +
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD----------------- 318
Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
+P++I++ + + C + +L + + ++ Y R+ DV + SAL+DM+AKCG + AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
VFD R+V+ W+ +I+ YG+HG +E + L + M RGG V PN+VTF+ L A
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM----ERGG-VHPNDVTFLGLLMA 433
Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
C+HSGMV EG F +M D + I P HYACV+DLLGRAG ++ AY++I MP +
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGV 491
Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKM 739
W +LL AC+ H++VE+GE AAQ LF ++P HYV LSN+Y++A+LWD+ +VR +M
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 740 KEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVL 799
KE G+ K+ GCSW+E + F GD SH + E++ +E + R+++ G+V + L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611
Query: 800 HNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESRE 859
H++N+EE E LC HSE++AIA+G+++TP GT +R+ KNLR C +CH ATK ISK+ RE
Sbjct: 612 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 671
Query: 860 IILRDVRRFHHFKNGTCSCGDYW 882
I++RD RFHHFK+G CSCGDYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694
Score = 216 bits (550), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 253/519 (48%), Gaps = 32/519 (6%)
Query: 69 TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
T S I D+F + A Q KQIHA ++ G S + L++ G
Sbjct: 14 TNSGIHSDSFYASLIDSATHKAQ----LKQIHARLLVLGLQFSGFLITK-LIHASSSFG- 67
Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
D+ +VFD + WN++I R + AL + M + V P SFT +
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 189 ACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKS--FED 245
ACS LS L++GR VH R+G + + F+ N L+A+YAK R+ A+T+F+ +
Sbjct: 128 ACSGLSH---LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
R +VSW IVS+ +QN + +EA+ QM +KPD V++ SVL A + L+ L G+ I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
HA ++ + I+ + S L MY C +V + +FD + + LWNAMI+GY +N Y
Sbjct: 245 HASVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
EA+ +F +M + P+ +++S + AC + + ++ + + D ++ +
Sbjct: 304 AREAIDMFHEMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
AL+DM+++ G +E ++ +FD RD V W+ MI GY + G+ +A+ L R M+
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME------ 416
Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
R V+ PN +T + +L C + +G + + + +
Sbjct: 417 -RGGVH----------PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 546 VDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
+D+ + G L+ A V MPV+ V W ++ A H
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 224/428 (52%), Gaps = 14/428 (3%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W +R +R+N F++A+L Y M + + PD+F FP +LKA +G+ L +G+ +HA V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD--RITEKDQVSWNSMIATLCRFGKWD 162
+ G+ + V V N L+ +Y KC + VF+ + E+ VSW ++++ + G+
Sbjct: 147 RLGFD-ADVFVQNGLIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
ALE F M +V+P LVSV A + L L+ GR +H + +++G E ++
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ---DLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+L MYAK G+V AK LF + +L+ WN ++S ++N EA+ +M + ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D +SI S + AC+ + L+ + ++ Y R+D D+ F+ SAL+DM+ C VE R V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGARLV 380
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
FD D+ + +W+AMI GYG + EA+ L+ ME G+ PN T ++ AC S
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGM 439
Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMIT 460
+ + + ++D+ R G ++ + + M V+ V+ W +++
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 461 GYTICGQH 468
C +H
Sbjct: 500 A---CKKH 504
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 7/276 (2%)
Query: 27 TTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKA 86
T LPLP R SW + + A++ + EA+ + +M + D++PD A +VL A
Sbjct: 175 TVFEGLPLP---ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 87 VAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQV 146
+QDL G+ IHA VVK G + + +L MY KCG + +FD++ + +
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEP-DLLISLNTMYAKCGQ-VATAKILFDKMKSPNLI 289
Query: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
WN+MI+ + G A++ F M+ +V P + ++ S AC+ + + R +
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 207 GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
G S + FI +AL+ M+AK G V+ A+ +F DRD+V W+ ++ + + E
Sbjct: 350 GRSDYRDD--VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 267 AVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
A+ R M G+ P+ V+ +L AC+H M+ G
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 307/853 (35%), Positives = 485/853 (56%), Gaps = 44/853 (5%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQ--DLSLGKQIHA 101
SW + +++ R A + M +P + F +++ + D+ L +QI
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMC 232
Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
+ K G L+ + V + LV+ + K GS + KVF+++ ++ V+ N ++ L R KW
Sbjct: 233 TIQKSGL-LTDLFVGSGLVSAFAKSGSLSY-ARKVFNQMETRNAVTLNGLMVGLVR-QKW 289
Query: 162 DLALEAFRMMLYSN----VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EW 215
EA ++ + N V P S+ ++ + +L+ GL+ GR+VHG+ + G ++
Sbjct: 290 --GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
I N L+ MYAK G + DA+ +F D+D VSWN++++ L QN F+EAV + M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
I P ++ S L +C+ L+ G++IH +L+ I ++ S V +AL+ +Y +
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETGYL 466
Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYD-EEALMLFIKMEEVAGLWPNATTMSSVVP 394
R++F + + WN++I ++E EA++ F+ + AG N T SSV+
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVLS 525
Query: 395 ACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDM-EVRDTV 453
A + IHG A+K + + +NAL+ Y + G ++ + IF M E RD V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 454 SWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPG 513
+WN+MI+GY H + L K + V+ + +T R +S TVL
Sbjct: 586 TWNSMISGYI----HNELL-----------AKALDLVWFMLQTGQRL--DSFMYATVLSA 628
Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITW 573
+++ L +G E+HA ++R L +DVVVGSALVDMY+KCG L++A R F+ MPVRN +W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 574 NVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF 633
N +I Y HG+G+E L+L + M +G + P+ VTF+ + +ACSH+G++ EG F
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDG----QTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 634 YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIH 692
M D YG+ P +H++C+ D+LGRAG+++ I MP + W ++LGAC R +
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK-PNVLIWRTVLGACCRAN 803
Query: 693 -QNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
+ E+G+ AA+ LF LEP+ A +YVLL N+Y++ W+ + RKKMK+ V+KE G S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLL 811
W+ D +H F+AGD SH ++ ++ L+ L+ +MR GYVP T L+++ +E KE +L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 812 CGHSEKLAIAFGILNTPPGTT--IRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
HSEKLA+AF +L +T IR+ KNLRVC DCH A K+ISKIE R+IILRD RFH
Sbjct: 924 SYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 870 HFKNGTCSCGDYW 882
HF++G CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 181/662 (27%), Positives = 317/662 (47%), Gaps = 37/662 (5%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSL--GKQIHA 101
SW + +R+ + +EA++ +M + I + +AF +VL+A I + + G+QIH
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG 128
Query: 102 HVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKW 161
+ K Y + +V V+N L++MY KC + F I K+ VSWNS+I+ + G
Sbjct: 129 LMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 162 DLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIM 220
A F M Y P+ +T S+ +L+ D +RL Q+ + G + F+
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD-VRLLEQIMCTIQKSGLLTDLFVG 246
Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGI 279
+ L++ +AK G + A+ +F E R+ V+ N ++ L + EA +F+ ++ +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 280 KPDG-VSIASVLPACSHLEM--LDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVE 336
P+ V + S P S E L G+E+H + + ++ +G+ LV+MY C +
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
RRVF F++DK WN+MITG QN EA+ + M + P + T+ S + +C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSC 425
Query: 397 VRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWN 456
+ + IHG ++KLG+ + V NALM +Y+ G + + IF M D VSWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
++I L R +++ E V L+ K N IT +VL +
Sbjct: 486 SIIGA------------LARSERSLPEAV----VCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNV 575
LS GK+IH A++N +A + +AL+ Y KCG ++ ++F M R+ +TWN
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 576 IIMAYGMHGE-GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
+I Y +H E + L+L+ M+ G R + + + +A + + GM++ +
Sbjct: 590 MISGY-IHNELLAKALDLVWFMLQTGQR-----LDSFMYATVLSAFASVATLERGMEV-H 642
Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQN 694
+E + +VD+ + G+++ A + N MP + +W+S++ H
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR--NSYSWNSMISGYARHGQ 700
Query: 695 VE 696
E
Sbjct: 701 GE 702
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 157/582 (26%), Positives = 272/582 (46%), Gaps = 34/582 (5%)
Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
V + N L+N Y + G D KVFD + ++ VSW +++ R G+ AL R M+
Sbjct: 36 VYLCNNLINAYLETG-DSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAK-L 230
+ + + VSV AC + G+ GRQ+HG ++ + + N L++MY K +
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSV-GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS-V 289
G V A F E ++ VSWN+I+S SQ A M G +P + S V
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKK 349
ACS E E ++ L+ + FVGS LV + + R+VF+ + +
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 350 IALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNA-TTMSSVVPACVRSEAFPDKEG- 407
N ++ G + ++ EEA LF+ M + + P + + S P +E K+G
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 408 -IHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTIC 465
+HGH I GL + N L++MY++ G I ++ +F M +D+VSWN+MITG
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
G +A+ + M+ R+++ P S TL++ L C +L G++
Sbjct: 394 GCFIEAVERYKSMR-------RHDIL----------PGSFTLISSLSSCASLKWAKLGQQ 436
Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
IH +++ + +V V +AL+ +YA+ G LN R++F MP + ++WN II G
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII---GALAR 493
Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLF-YKMKDDYGIEP 644
+ L R G+ K N +TF ++ +A S G + +K++ E
Sbjct: 494 SERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
+ ++ ++ G+ G+++ ++ + M D W+S++
Sbjct: 553 TTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMI 591
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 222/484 (45%), Gaps = 39/484 (8%)
Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
+ ++ N L+ Y + G A+ +F R+ VSW IVS S+N + EA++FLR M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDT--GKEIHAYALRNDILIDNSFVGSALVDMYCNC- 332
GI + + SVL AC + + G++IH + +D + V + L+ MY C
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD-AVVSNVLISMYWKCI 153
Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
V F I K WN++I+ Y Q A +F M + G P T S+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSL 212
Query: 393 V-PACVRSEAFPDK---EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
V AC +E PD E I K GL D +V + L+ +++ G + ++ +F+ ME
Sbjct: 213 VTTACSLTE--PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNS-ITL 507
R+ V+ N ++ G +A L +M +M + P S + L
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM----------------IDVSPESYVIL 314
Query: 508 MTVLP--GCGALSALAKGKEIHAYAIRNMLATDVV-VGSALVDMYAKCGCLNFARRVFDL 564
++ P L KG+E+H + I L +V +G+ LV+MYAKCG + ARRVF
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 565 MPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSG 624
M ++ ++WN +I +G E +E K+M R ++ P T I+ ++C+
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSM-----RRHDILPGSFTLISSLSSCASLK 429
Query: 625 MVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSS 684
G + + GI+ + ++ L G + + ++ + M PE D+ +W+S
Sbjct: 430 WAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM-PEHDQV-SWNS 486
Query: 685 LLGA 688
++GA
Sbjct: 487 IIGA 490
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
H K L +D Y+ N L++ Y G ++ +FD+M +R+ VSW +++GY+ G+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 468 HGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK--GKE 525
H +AL+ LR+M + E + N ++VL C + ++ G++
Sbjct: 83 HKEALVFLRDM--------------VKEGIF---SNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKC-GCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
IH + A D VV + L+ MY KC G + +A F + V+N ++WN II Y G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF-AACS 621
+ + + +M +GSR P E TF +L ACS
Sbjct: 186 DQRSAFRIFSSMQYDGSR-----PTEYTFGSLVTTACS 218
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
H+ +N L DV + + L++ Y + G AR+VFD MP+RN ++W I+ Y +GE
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMV 626
+E L L++MV EG + N+ F+++ AC G V
Sbjct: 83 HKEALVFLRDMVKEG-----IFSNQYAFVSVLRACQEIGSV 118
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 291/802 (36%), Positives = 450/802 (56%), Gaps = 55/802 (6%)
Query: 92 DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSM 151
+L K +HA +V + +V ++ LVN+Y G ++ FD I +D +WN M
Sbjct: 66 NLQSAKCLHARLV-VSKQIQNVCISAKLVNLYCYLG-NVALARHTFDHIQNRDVYAWNLM 123
Query: 152 IATLCRFGKWDLALEAFRM-MLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL 210
I+ R G + F + ML S + P T SV AC + G ++H +L
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID------GNKIHCLAL 177
Query: 211 RVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVM 269
+ G W+ ++ +L+ +Y++ V +A+ LF RD+ SWN ++S Q+ EA+
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 270 FLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMY 329
LR + D V++ S+L AC+ + G IH+Y++++ L FV + L+D+Y
Sbjct: 238 L--SNGLRAM--DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLY 292
Query: 330 CNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
+ ++VFD + + + WN++I Y NE A+ LF +M ++ + P+ T+
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTL 351
Query: 390 SSV---------VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
S+ + AC + F ++G I +G NA++ MY+++G ++ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG--------NAVVVMYAKLGLVDSA 403
Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
+ +F+ + D +SWNT+I+GY G +A+ EM N+ EE+
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAI----EMYNIMEEEGE------------I 447
Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
N T ++VLP C AL +G ++H ++N L DV V ++L DMY KCG L A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 561 VFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAAC 620
+F +P N + WN +I +G HG G++ + L K M+ EG VKP+ +TF+ L +AC
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-----VKPDHITFVTLLSAC 562
Query: 621 SHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAG 680
SHSG+V EG F M+ DYGI PS HY C+VD+ GRAG++E A + I M + D A
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD-AS 621
Query: 681 AWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMK 740
W +LL ACR+H NV++G+IA+++LF +EP+ ++VLLSN+Y+SA W+ ++R
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 741 EMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
G+RK PG S +E +++ F G+ +H E+++ L L +++ GYVPD VL
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 801 NVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREI 860
+V ++EKE +L HSE+LAIAF ++ TP TTIR+ KNLRVC DCH TKFISKI REI
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 861 ILRDVRRFHHFKNGTCSCGDYW 882
I+RD RFHHFKNG CSCGDYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 240 bits (612), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/629 (28%), Positives = 302/629 (48%), Gaps = 56/629 (8%)
Query: 38 QTRCKESWIESLRSEARSNQFREAILSY-IEMTRSDIQPDNFAFPAVLKAVAGIQDLSLG 96
Q R +W + R+ E I + + M S + PD FP+VLKA + D G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169
Query: 97 KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
+IH +K+G+ + V VA +L+++Y + + + + +FD + +D SWN+MI+ C
Sbjct: 170 NKIHCLALKFGF-MWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 157 RFGKWDLAL---EAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG 213
+ G AL R M S T+VS+ AC+ G +H S++ G
Sbjct: 228 QSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAG---DFNRGVTIHSYSIKHG 277
Query: 214 -EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLR 272
E F+ N L+ +YA+ GR+ D + +F RDL+SWN+I+ + N++ L A+ +
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 273 QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
+M L I+PD +++ S+ S L + + + + LR +++ +G+A+V MY
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
V+ R VF+++ + + WN +I+GY QN + EA+ ++ MEE + N T SV
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 393 VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
+PAC ++ A +HG +K GL D +V +L DMY + GR+E + ++F + ++
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLP 512
V WNT+I + G A+ML +EM LDE V KP+ IT +T+L
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEM--------------LDEGV---KPDHITFVTLLS 560
Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSAL------VDMYAKCGCLNFARRVFDLMP 566
C + +G+ M+ TD + +L VDMY + G L A + M
Sbjct: 561 ACSHSGLVDEGQWCF-----EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 567 VR-NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
++ + W ++ A +HG L + +E EV+P V + L + S
Sbjct: 616 LQPDASIWGALLSACRVHGNVD-----LGKIASE--HLFEVEPEHVGYHVLLSNMYASAG 668
Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
EG+D + G+ +P + VD
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/657 (41%), Positives = 382/657 (58%), Gaps = 39/657 (5%)
Query: 238 TLFKSFEDR-DLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
TLF + D+ D+ SWN++++ L+++ EA++ M + P S + ACS L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 297 EMLDTGKEIH----AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIAL 352
+ +GK+ H + ++DI FV SAL+ MY C ++E R+VFD I + I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDI-----FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 353 WNAMITGYGQNEYDEEALMLFIKM-----EEVAGLWPNATTMSSVVPACVRSEAFPDKEG 407
W +MI GY N +A+ LF + ++ ++ ++ + SV+ AC R A E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGR--IEISKTIFDDMEVRDTVSWNTMITGYTIC 465
IH IK G R V N L+D Y++ G + +++ IFD + +D VS+N++++ Y
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 466 GQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE 525
G +A + R + +N V N+ITL TVL AL GK
Sbjct: 265 GMSNEAFEVFRRLV-------KNKVVTF---------NAITLSTVLLAVSHSGALRIGKC 308
Query: 526 IHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGE 585
IH IR L DV+VG++++DMY KCG + AR+ FD M +NV +W +I YGMHG
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 586 GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPS 645
+ LEL M+ G V+PN +TF+++ AACSH+G+ EG F MK +G+EP
Sbjct: 369 AAKALELFPAMIDSG-----VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 646 PDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNL 705
+HY C+VDLLGRAG ++ AY LI M + D WSSLL ACRIH+NVE+ EI+ L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVELAEISVARL 482
Query: 706 FLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAG 765
F L+ +Y+LLS+IY+ A W VR MK G+ K PG S +E E+H FL G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 766 DGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGIL 825
D H Q E+++ FL L+ ++ + GYV +TS V H+V+EEEKE L HSEKLAIAFGI+
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602
Query: 826 NTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
NT PG+T+ V KNLRVC+DCH K ISKI RE ++RD +RFHHFK+G CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 225/435 (51%), Gaps = 23/435 (5%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + ARS EA+L++ M + + P +FP +KA + + D+ GKQ H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+GY S + V++ L+ MY CG + D KVFD I +++ VSW SMI G
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 164 ALEAFRMMLYSNVEP------SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWN 216
A+ F+ +L + S LVSV ACS + + L +H ++ G +
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG---LTESIHSFVIKRGFDRG 217
Query: 217 TFIMNALMAMYAKLGR--VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQ 273
+ N L+ YAK G V A+ +F D+D VS+N+I+S +Q+ EA +F R
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
+ + + + +++++VL A SH L GK IH +R L D+ VG++++DMYC C
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCG 336
Query: 334 EVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVV 393
VE R+ FD + +K + W AMI GYG + + +AL LF M + +G+ PN T SV+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVL 395
Query: 394 PACVRSEAFPDKEGIH-GHAIKLGLGRDRYVQN--ALMDMYSRMGRIEISKTIFDDMEVR 450
AC S A EG +A+K G + +++ ++D+ R G ++ + + M+++
Sbjct: 396 AAC--SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 451 -DTVSWNTMITGYTI 464
D++ W++++ I
Sbjct: 454 PDSIIWSSLLAACRI 468
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 33/460 (7%)
Query: 136 VFDRITEK-DQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
+F+R +K D SWNS+IA L R G AL AF M ++ P+ + ACS+L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
+ G+Q H + G + + F+ +AL+ MY+ G+++DA+ +F R++VSW +
Sbjct: 91 ---DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 254 IVSSLSQNDKFLEAVMFLRQMAL------RGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
++ N L+AV + + + + D + + SV+ ACS + + IH+
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 308 YALRNDILIDNSFVGSALVDMYCNCRE--VECGRRVFDFISDKKIALWNAMITGYGQNEY 365
+ ++ S VG+ L+D Y E V R++FD I DK +N++++ Y Q+
Sbjct: 208 FVIKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
EA +F ++ + + NA T+S+V+ A S A + IH I++GL D V
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
+++DMY + GR+E ++ FD M+ ++ SW MI GY + G AL L M
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM------- 379
Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG-KEIHAYAIRNMLATDVVVGSA 544
+D V +PN IT ++VL C +G + +A R + +
Sbjct: 380 -------IDSGV---RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429
Query: 545 LVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMH 583
+VD+ + G L A + M ++ + I W+ ++ A +H
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/638 (40%), Positives = 382/638 (59%), Gaps = 31/638 (4%)
Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
+S N ++ SL + K +A+ L Q + P + ++ C H L +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
L N D F+ + L+ MY + V+ R+VFD + I +WNA+ + EE
Sbjct: 103 ILDNGSDQD-PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK----EGIHGHAIKLGLGRDRYVQ 424
L L+ KM + G+ + T + V+ ACV SE + + IH H + G Y+
Sbjct: 162 VLGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEE 484
L+DMY+R G ++ + +F M VR+ VSW+ MI Y G+ +AL REM M E
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM--MRET 278
Query: 485 KNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSA 544
K+ + PNS+T+++VL C +L+AL +GK IH Y +R L + + V SA
Sbjct: 279 KDSS-------------PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 545 LVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
LV MY +CG L +RVFD M R+V++WN +I +YG+HG G++ +++ + M+A G+
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA--- 382
Query: 605 EVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
P VTF+++ ACSH G+V EG LF M D+GI+P +HYAC+VDLLGRA ++++
Sbjct: 383 --SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 665 AYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYS 724
A +++ M E W SLLG+CRIH NVE+ E A++ LF LEP A +YVLL++IY+
Sbjct: 441 AAKMVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499
Query: 725 SAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSE 784
AQ+WD+ V+K ++ G++K PG W+E +++ F++ D + EQ+H FL L+E
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559
Query: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
M+++GY+P T VL+ + EEKE ++ GHSEKLA+AFG++NT G IR+ KNLR+C D
Sbjct: 560 DMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCED 619
Query: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
CH TKFISK +EI++RDV RFH FKNG CSCGDYW
Sbjct: 620 CHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 203/448 (45%), Gaps = 33/448 (7%)
Query: 145 QVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGR 203
++S N +I +LC+ GK A+ +L PS T + L C + S D LR+ R
Sbjct: 46 KISNNQLIQSLCKEGKLKQAIR----VLSQESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 204 QVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
+ N + + F+ L+ MY+ LG VD A+ +F R + WN + +L+
Sbjct: 102 HILDNG---SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE----MLDTGKEIHAYALRNDILIDNS 319
E + +M G++ D + VL AC E L GKEIHA+ R +
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG-YSSHV 217
Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK-MEE 378
++ + LVDMY V+ VF + + + W+AMI Y +N EAL F + M E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
PN+ TM SV+ AC A + IHG+ ++ GL V +AL+ MY R G++E
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
+ + +FD M RD VSWN++I+ Y + G A+ + EM
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-----------------LAN 380
Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLN- 556
P +T ++VL C + +GK + R+ + + + +VD+ + L+
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 557 FARRVFDLMPVRNVITWNVIIMAYGMHG 584
A+ V D+ W ++ + +HG
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 231/499 (46%), Gaps = 42/499 (8%)
Query: 8 LTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE 67
+ LP PL P + A + P S K S + ++S + + ++AI
Sbjct: 17 VNFLPRSPLKP-----PSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAI----R 67
Query: 68 MTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG 127
+ + P + ++ LS ++H H++ G +A L+ MY G
Sbjct: 68 VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPF-LATKLIGMYSDLG 126
Query: 128 SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVA 187
S + KVFD+ ++ WN++ L G + L + M VE FT V
Sbjct: 127 SVDY-ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 188 LAC-SNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
AC ++ + L G+++H + R G + +IM L+ MYA+ G VD A +F
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK---PDGVSIASVLPACSHLEMLDTG 302
R++VSW+ +++ ++N K EA+ R+M +R K P+ V++ SVL AC+ L L+ G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREM-MRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 303 KEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYG 361
K IH Y LR +D+ V SALV MY C ++E G+RVFD + D+ + WN++I+ YG
Sbjct: 305 KLIHGYILRRG--LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI--HGHAIKLGLGR 419
+ Y ++A+ +F +M G P T SV+ AC EG+ G + + R
Sbjct: 363 VHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGAC-------SHEGLVEEGKRLFETMWR 414
Query: 420 DRYVQ------NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDAL 472
D ++ ++D+ R R++ + + DM W +++ C HG+
Sbjct: 415 DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS---CRIHGNVE 471
Query: 473 MLLREMQNM--EEEKNRNN 489
+ R + + E KN N
Sbjct: 472 LAERASRRLFALEPKNAGN 490
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/734 (36%), Positives = 405/734 (55%), Gaps = 97/734 (13%)
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
F N +++ Y+K G +D F RD VSW T++ ++ +A+ + M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAY----ALRNDILIDNSFVGSALVDMYCNCR 333
GI+P ++ +VL + + ++TGK++H++ LR ++ + NS L++MY C
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS-----LLNMYAKCG 195
Query: 334 EVECGRRVFDFI-------------------------------SDKKIALWNAMITGYGQ 362
+ + VFD + +++ I WN+MI+G+ Q
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
YD AL +F KM + L P+ T++SV+ AC E + IH H + G
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 423 VQNALMDMYSRMGRIEI---------------------------------SKTIFDDMEV 449
V NAL+ MYSR G +E +K IF ++
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 450 RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMT 509
RD V+W MI GY G +G+A+ L R M + +PNS TL
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-----------------RPNSYTLAA 418
Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV-R 568
+L +L++L+ GK+IH A+++ V V +AL+ MYAK G + A R FDL+ R
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 569 NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSE 628
+ ++W +I+A HG +E LEL + M+ EG R P+ +T++ +F+AC+H+G+V++
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLR-----PDHITYVGVFSACTHAGLVNQ 533
Query: 629 GMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
G F MKD I P+ HYAC+VDL GRAG +++A + I MP E D W SLL A
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLLSA 592
Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEP 748
CR+H+N+++G++AA+ L LLEP+ + Y L+N+YS+ W++A +RK MK+ V+KE
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 749 GCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKE 808
G SWIE ++H F DG+H + +++ ++ + + ++K GYVPDT+ VLH++ EE KE
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Query: 809 TLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRF 868
+L HSEKLAIAFG+++TP TT+R+ KNLRVCNDCH A KFISK+ REII+RD RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772
Query: 869 HHFKNGTCSCGDYW 882
HHFK+G CSC DYW
Sbjct: 773 HHFKDGFCSCRDYW 786
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 166/619 (26%), Positives = 270/619 (43%), Gaps = 112/619 (18%)
Query: 96 GKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATL 155
G +HA + L + NT+++ Y K G DM + FD++ ++D VSW +MI
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRG-DMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
G++ A+ M+ +EP+ FTL +V LA +R + G++VH +++G
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV-LASVAATR--CMETGKKVHSFIVKLGLR 178
Query: 215 WNTFIMNALMAMYAK-------------------------------LGRVDDAKTLFKSF 243
N + N+L+ MYAK +G++D A F+
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 244 EDRDLVSWNTIVSSLSQNDKFLEAV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
+RD+V+WN+++S +Q L A+ +F + + + PD ++ASVL AC++LE L G
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298
Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR---------------------- 340
K+IH++ + I + V +AL+ MY C VE RR
Sbjct: 299 KQIHSHIVTTGFDI-SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 341 -----------VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTM 389
+F + D+ + W AMI GY Q+ EA+ LF M G PN+ T+
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTL 416
Query: 390 SSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV 449
++++ + + IHG A+K G V NAL+ MY++ G I + FD +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 450 -RDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
RDTVSW +MI QHG A L + M E R P+ IT +
Sbjct: 477 ERDTVSWTSMIIA---LAQHGHAEEALELFETMLMEGLR--------------PDHITYV 519
Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGS-----ALVDMYAKCGCLNFARRVFD 563
V C + +G++ M D ++ + +VD++ + G L A+ +
Sbjct: 520 GVFSACTHAGLVNQGRQY----FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 564 LMPVR-NVITWNVIIMAYGMHGE---GQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
MP+ +V+TW ++ A +H G+ E L + E S N L++A
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN------LYSA 629
Query: 620 CSHSGMVSEGMDLFYKMKD 638
C G E + MKD
Sbjct: 630 C---GKWEEAAKIRKSMKD 645
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 229/500 (45%), Gaps = 102/500 (20%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + Q+ +AI +M + I+P F VL +VA + + GK++H+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
VK G +V+V+N+L+NMY KCG M + VFDR+ +D SWN+MIA + G+ DL
Sbjct: 173 VKLGL-RGNVSVSNSLLNMYAKCGDPMMAKF-VFDRMVVRDISSWNAMIALHMQVGQMDL 230
Query: 164 ALEAF--------------------------------RMMLYSNVEPSSFTLVSVALACS 191
A+ F +M+ S + P FTL SV AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 192 NLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA---------------------- 228
NL + L +G+Q+H + + G + + ++NAL++MY+
Sbjct: 291 NLEK---LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 229 -----------KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
KLG ++ AK +F S +DRD+V+W ++ Q+ + EA+ R M
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
G +P+ ++A++L S L L GK+IH A+++ + S V +AL+ MY +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGNITS 466
Query: 338 GRRVFDFIS-DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
R FD I ++ W +MI Q+ + EEAL LF M + GL P+ T V AC
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-LMEGLRPDHITYVGVFSAC 525
Query: 397 VRSEAFPDKEGIHGHAIKLGLGR---------DRYVQN-----ALMDMYSRMGRIEISKT 442
HA + GR D+ + ++D++ R G ++ ++
Sbjct: 526 T-------------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 443 IFDDMEVR-DTVSWNTMITG 461
+ M + D V+W ++++
Sbjct: 573 FIEKMPIEPDVVTWGSLLSA 592
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 78/361 (21%)
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
+H IK GL Y+ N LM++YS+ G ++ +FD+M +R SWNT+++ Y+ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 468 HGDALMLLREMQNMEE---------EKNRNNVYDL-----DETVLRPKPNSITLMTVLPG 513
++ + KN + D +P TL VL
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 514 CGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPV------ 567
A + GK++H++ ++ L +V V ++L++MYAKCG A+ VFD M V
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 568 -------------------------RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
R+++TWN +I + G L++ M+ R
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML----R 271
Query: 603 GGEVKPNEVTFIALFAACS-----------HSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
+ P+ T ++ +AC+ HS +V+ G D+ GI +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI-------SGIVLNA----- 319
Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEI-AAQNLFLLEP 710
++ + R G VE A +LI + K +++LL +++G++ A+N+F+
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG-----YIKLGDMNQAKNIFVSLK 374
Query: 711 D 711
D
Sbjct: 375 D 375
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 54/315 (17%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
+W + + + EAI + M +P+++ A+L + + LS GKQIH
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGKWD 162
VK G + SV+V+N L+ MY K G ++ + FD I E+D VSW SMI L + G +
Sbjct: 440 VKSG-EIYSVSVSNALITMYAKAG-NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNA 222
ALE F ML + P T V V AC++
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTH------------------------------ 527
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRD-----LVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
G V+ + F +D D L + +V + EA F+ +M
Sbjct: 528 -------AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP-- 578
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI--DNSFVGSALVDMYCNCREV 335
I+PD V+ S+L AC + +D GK A +L+ +NS SAL ++Y C +
Sbjct: 579 -IEPDVVTWGSLLSACRVHKNIDLGK----VAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 336 ECGRRVFDFISDKKI 350
E ++ + D ++
Sbjct: 634 EEAAKIRKSMKDGRV 648
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 502 PNSITLMTVLPGCGALSALAKGKE--------IHAYAIRNMLATDVVVGSALVDMYAKCG 553
P ++L T+L C L + K +H I++ L V + + L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 554 CLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
AR++FD MP+R +WN ++ AY G+ E +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 276/748 (36%), Positives = 398/748 (53%), Gaps = 82/748 (10%)
Query: 135 KVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
K+FD + E+D VSWN MI R A E F +M +V S S +
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV-------CSWNTMLSGYA 168
Query: 195 RRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTI 254
+ + R V R+ E N NAL++ Y + ++++A LFKS E+ LVSWN +
Sbjct: 169 QNGCVDDARSVFD---RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL 225
Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
+ + K +EA F M +R D VS +++ + +GK A L ++
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQ-----SGKIDEARQLFDES 276
Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
+ + F +A+V Y R VE R +FD + ++ WNAM+ GY Q E E A LF
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF- 335
Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
V+P R+ N ++ Y++
Sbjct: 336 ----------------DVMPC-----------------------RNVSTWNTMITGYAQC 356
Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
G+I +K +FD M RD VSW MI GY+ G +AL L +M+ NR+
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS------ 410
Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
+ + L C + AL GK++H ++ T VG+AL+ MY KCG
Sbjct: 411 -----------SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
+ A +F M +++++WN +I Y HG G+ L ++M EG +KP++ T +
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-----LKPDDATMV 514
Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
A+ +ACSH+G+V +G FY M DYG+ P+ HYAC+VDLLGRAG +EDA+ L+ MP
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 675 EFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMD 734
E D A W +LLGA R+H N E+ E AA +F +EP+ + YVLLSN+Y+S+ W
Sbjct: 575 EPD-AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 633
Query: 735 VRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPD 794
+R +M++ GV+K PG SWIE ++ H F GD H + +++ FLE L RM+K GYV
Sbjct: 634 LRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSK 693
Query: 795 TSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISK 854
TS VLH+V EEEKE ++ HSE+LA+A+GI+ G IRV KNLRVC DCH A K++++
Sbjct: 694 TSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAR 753
Query: 855 IESREIILRDVRRFHHFKNGTCSCGDYW 882
I R IILRD RFHHFK+G+CSCGDYW
Sbjct: 754 ITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 213/517 (41%), Gaps = 70/517 (13%)
Query: 212 VGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFL 271
+ EWN I + Y + GR ++A +FK VS+N ++S +N +F A
Sbjct: 64 IKEWNVAI-----SSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCN 331
+M R D VS ++ L +E+ D+ N+ + Y
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQ 169
Query: 332 CREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSS 391
V+ R VFD + +K WNA+++ Y QN EEA MLF E A + N
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 392 V-VPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR 450
V V + F D + RD N ++ Y++ G+I+ ++ +FD+ V+
Sbjct: 230 VKKKKIVEARQFFDSMNV----------RDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 451 DTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTV 510
D +W M++GY +QN E+ R ++D P+ N ++ +
Sbjct: 280 DVFTWTAMVSGY---------------IQNRMVEEAR-ELFD-----KMPERNEVSWNAM 318
Query: 511 LPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNV 570
L G + KE+ M +V + ++ YA+CG ++ A+ +FD MP R+
Sbjct: 319 LAGYVQGERMEMAKELFDV----MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 571 ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGM 630
++W +I Y G E L L M EG R N +F + + C+ + G
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGR-----LNRSSFSSALSTCADVVALELGK 429
Query: 631 DLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACR 690
L ++ G E ++ + + G +E+A L M + +W++++
Sbjct: 430 QLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK--DIVSWNTMIAGYS 486
Query: 691 IHQNVEIGEIAAQNLFL-------LEPDVASHYVLLS 720
H GE+A + F L+PD A+ +LS
Sbjct: 487 RHG---FGEVALR--FFESMKREGLKPDDATMVAVLS 518
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + ++S EA+ +++M R + + +F + L A + L LGKQ+H +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
VK GY + V N L+ MY KCGS + + +F + KD VSWN+MIA R G ++
Sbjct: 436 VKGGYE-TGCFVGNALLLMYCKCGS-IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQ-VHGNSLRVGEW-NTFIMN 221
AL F M ++P T+V+V ACS+ D GRQ + + G N+
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK---GRQYFYTMTQDYGVMPNSQHYA 550
Query: 222 ALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIVSS 257
++ + + G ++DA L K+ + D W T++ +
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 428/755 (56%), Gaps = 34/755 (4%)
Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHG 207
+NS+I G + A+ F M+ S + P +T AC+ SR G G Q+HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGN--GIQIHG 158
Query: 208 NSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLE 266
+++G + F+ N+L+ YA+ G +D A+ +F +R++VSW +++ ++ D +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 267 AV-MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSAL 325
AV +F R + + P+ V++ V+ AC+ LE L+TG++++A+ +RN + N + SAL
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSAL 277
Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
VDMY C ++ +R+FD + L NAM + Y + EAL +F M + +G+ P+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPD 336
Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
+M S + +C + + HG+ ++ G + NAL+DMY + R + + IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 446 DMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK--NRNNVYD------LDETV 497
M + V+WN+++ GY ++G+ + M E+ + N + L E
Sbjct: 397 RMSNKTVVTWNSIVAGYV---ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 498 LRP----------KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
+ + +T+M++ CG L AL K I+ Y +N + DV +G+ LVD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
M+++CG A +F+ + R+V W I A M G + +EL +M+ +G +K
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG-----LK 568
Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
P+ V F+ ACSH G+V +G ++FY M +G+ P HY C+VDLLGRAG +E+A Q
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
LI MP E + W+SLL ACR+ NVE+ AA+ + +L P+ YVLLSN+Y+SA
Sbjct: 629 LIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
W+ VR MKE G+RK PG S I+ + H+F +GD SH + + L+ +S+R
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747
Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQ 847
G+VPD S VL +V+E+EK +L HSEKLA+A+G++++ GTTIR+ KNLRVC+DCH
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807
Query: 848 ATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
KF SK+ +REIILRD RFH+ + G CSCGD+W
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 272/576 (47%), Gaps = 68/576 (11%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
+R A S EAIL ++ M S I PD + FP L A A + G QIH +VK GY
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEA- 167
+ V N+LV+ Y +CG ++ KVFD ++E++ VSW SMI C + + D A +A
Sbjct: 166 A-KDLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMI---CGYARRDFAKDAV 220
Query: 168 ---FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
FRM+ V P+S T+V V AC+ L + L G +V+ G E N +++AL
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKL---EDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
+ MY K +D AK LF + +L N + S+ + EA+ M G++PD
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRNDI-LIDNSFVGSALVDMYCNCREVECGRRVF 342
+S+ S + +CS L + GK H Y LRN DN + +AL+DMY C + R+F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIF 395
Query: 343 DFISDKKIALWNAMITGYGQN-EYD------------------------------EEALM 371
D +S+K + WN+++ GY +N E D EEA+
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
+F M+ G+ + TM S+ AC A + I+ + K G+ D + L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
SR G E + +IF+ + RD +W I + G A+ L +M
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM------------- 562
Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIR--NMLATDVVVGSALVDMY 549
+++ + KP+ + + L C + +GKEI ++ + DV G +VD+
Sbjct: 563 -IEQGL---KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLL 617
Query: 550 AKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHG 584
+ G L A ++ + MP+ N + WN ++ A + G
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 229/525 (43%), Gaps = 82/525 (15%)
Query: 186 VALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
VA +C L R+ L ++V NS G F+ N+L+ YA G ++A
Sbjct: 71 VARSCE-LGTRESLSFAKEVFENSESYG--TCFMYNSLIRGYASSGLCNEA--------- 118
Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
++FLR M GI PD + L AC+ G +I
Sbjct: 119 ---------------------ILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 306 HAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEY 365
H ++ D FV ++LV Y C E++ R+VFD +S++ + W +MI GY + ++
Sbjct: 157 HGLIVKMGYAKD-LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 366 DEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQN 425
++A+ LF +M + PN+ TM V+ AC + E E ++ G+ + + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 426 ALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEK 485
AL+DMY + I+++K +FD+ + N M + Y G +AL + M
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM------- 328
Query: 486 NRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSAL 545
+D V +P+ I++++ + C L + GK H Y +RN + + +AL
Sbjct: 329 -------MDSGV---RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 546 VDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM--------- 596
+DMY KC + A R+FD M + V+TWN I+ Y +GE E + M
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 597 -----VAEGSRGGE-------------VKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
+ +GS E V + VT +++ +AC H G + ++Y ++
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWS 683
+ GI+ +VD+ R G E A + N + AW+
Sbjct: 499 N-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWT 540
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
+W ++ + A + AI + +M ++PD AF L A + + GK+I +
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 104 VKYGYGLSSVTV-ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
+K +G+S V +V++ G+ G V + D E + V WNS++A CR
Sbjct: 598 LKL-HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA-CR 650
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/704 (36%), Positives = 390/704 (55%), Gaps = 33/704 (4%)
Query: 185 SVALACSNLSRRDGLRLGRQVHGNSLRV--GEWNTFIMNALMAMYAKLGRVDDAKTLFKS 242
++ L N +RLGR VH ++ F+ N L+ MY+KL + A+ + +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 243 FEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTG 302
R++VSW +++S L+QN F A++ +M G+ P+ + A + L + TG
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
K+IHA A++ ++D FVG + DMYC R + R++FD I ++ + WNA I+
Sbjct: 128 KQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
+ EA+ FI+ + G PN+ T + + AC +HG ++ G D
Sbjct: 187 DGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
V N L+D Y + +I S+ IF +M ++ VSW +++ Y +QN E
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY---------------VQNHE 290
Query: 483 EEKNR----NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
+EK + D+ ET + + +VL C ++ L G+ IHA+A++ +
Sbjct: 291 DEKASVLYLRSRKDIVET------SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
+ VGSALVDMY KCGC+ + + FD MP +N++T N +I Y G+ L L + M
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM-- 402
Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
RG PN +TF++L +ACS +G V GM +F M+ YGIEP +HY+C+VD+LGR
Sbjct: 403 -APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
AG VE AY+ I MP + W +L ACR+H ++G +AA+NLF L+P + ++VL
Sbjct: 462 AGMVERAYEFIKKMPIQ-PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520
Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
LSN +++A W +A VR+++K +G++K G SWI +++H F A D SH ++++
Sbjct: 521 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTT 580
Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
L L M GY PD L+++ EEEK + HSEKLA+AFG+L+ P IR+ KN
Sbjct: 581 LAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKN 640
Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
LR+C DCH KF+S REII+RD RFH FK+G CSC DYW
Sbjct: 641 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 247/526 (46%), Gaps = 34/526 (6%)
Query: 79 AFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFD 138
A +LK + LG+ +HA +VK +AN L+NMY K D + ++
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL--DHPESARLVL 65
Query: 139 RIT-EKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRD 197
R+T ++ VSW S+I+ L + G + AL F M V P+ FT A ++
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS----- 120
Query: 198 GLRL---GRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
LRL G+Q+H +++ G + F+ + MY K DDA+ LF +R+L +WN
Sbjct: 121 -LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
+S+ + + EA+ + P+ ++ + L ACS L+ G ++H LR+
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 314 ILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLF 373
D S V + L+D Y C+++ +F + K W +++ Y QN DE+A +L+
Sbjct: 240 FDTDVS-VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 374 IKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSR 433
++ + + + +SSV+ AC IH HA+K + R +V +AL+DMY +
Sbjct: 299 LRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK 357
Query: 434 MGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDL 493
G IE S+ FD+M ++ V+ N++I GY GQ AL L EM
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA-------------- 403
Query: 494 DETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG--SALVDMYAK 551
P PN +T +++L C A+ G +I ++R+ + S +VDM +
Sbjct: 404 -PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 552 CGCLNFARRVFDLMPVRNVIT-WNVIIMAYGMHGEGQEVLELLKNM 596
G + A MP++ I+ W + A MHG+ Q L +N+
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 21/446 (4%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + A++ F A++ + EM R + P++F FP KAVA ++ GKQIHA
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMW-DVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
VK G L V V + +MY C + + D K+FD I E++ +WN+ I+ G+
Sbjct: 135 VKCGRIL-DVFVGCSAFDMY--CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
A+EAF + P+S T + ACS+ L LG Q+HG LR G + + + N
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH---LNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEA-VMFLRQMALRGIK 280
L+ Y K ++ ++ +F ++ VSW ++V++ QN + +A V++LR ++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVE 307
Query: 281 PDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRR 340
I+SVL AC+ + L+ G+ IHA+A++ + FVGSALVDMY C +E +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 341 VFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA-GLWPNATTMSSVVPACVRS 399
FD + +K + N++I GY + AL LF +M G PN T S++ AC R+
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 400 EAFPDKEGIHG---HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-W 455
A + I + G + Y + ++DM R G +E + M ++ T+S W
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHY--SCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 456 NTMITGYTICGQHGDALMLLREMQNM 481
+ C HG + L +N+
Sbjct: 485 GAL---QNACRMHGKPQLGLLAAENL 507
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 43 ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
E+W + + + REAI ++IE R D P++ F A L A + L+LG Q+H
Sbjct: 175 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 234
Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
V++ G+ + V+V N L++ YGKC + +F + K+ VSW S++A + + +
Sbjct: 235 VLRSGFD-TDVSVCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
A + VE S F + SV AC+ ++ GL LGR +H ++++ E F+ +
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMA---GLELGRSIHAHAVKACVERTIFVGS 349
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI-- 279
AL+ MY K G ++D++ F +++LV+ N+++ + + A+ +MA RG
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID-NSFVGSALVDMYCNCREVECG 338
P+ ++ S+L ACS ++ G +I ++R+ I+ + S +VDM VE
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVE-- 466
Query: 339 RRVFDFIS----DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWP----NATTMS 390
R ++FI I++W A+ + + L+ E + L P N +S
Sbjct: 467 -RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL---AAENLFKLDPKDSGNHVLLS 522
Query: 391 SVVPACVR-SEAFPDKEGIHGHAIKLGLG 418
+ A R +EA +E + G IK G G
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAG 551
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 39 TRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
T+ SW + + ++++ +A + Y+ + ++ +F +VL A AG+ L LG+
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 99 IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
IHAH VK ++ V + LV+MYGKCG + D + FD + EK+ V+ NS+I
Sbjct: 332 IHAHAVKACVE-RTIFVGSALVDMYGKCGC-IEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 159 GKWDLALEAFRMMLYSNVEPSS--FTLVSVALACS 191
G+ D+AL F M P+ T VS+ ACS
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 273/782 (34%), Positives = 432/782 (55%), Gaps = 39/782 (4%)
Query: 106 YGYGLSS-----VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGK 160
Y LSS V + N + M+ + G ++ D + VF +++E++ SWN ++ + G
Sbjct: 117 YSIALSSMSSLGVELGNAFLAMFVRFG-NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY 175
Query: 161 WDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
+D A+ + RM+ V+P +T V C + L G++VH + +R G E +
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP---DLARGKEVHVHVVRYGYELDID 232
Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
++NAL+ MY K G V A+ LF RD++SWN ++S +N E + M
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292
Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
+ PD +++ SV+ AC L G++IHAY + +D S V ++L MY N
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS-VCNSLTQMYLNAGSWREA 351
Query: 339 RRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR 398
++F + K I W MI+GY N ++A+ + +M + + P+ T+++V+ AC
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACAT 410
Query: 399 SEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTM 458
+H AIK L V N L++MYS+ I+ + IF ++ ++ +SW ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 459 ITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALS 518
I G + + +AL+ LR+M+ + +PN+ITL L C +
Sbjct: 471 IAGLRLNNRCFEALIFLRQMK------------------MTLQPNAITLTAALAACARIG 512
Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
AL GKEIHA+ +R + D + +AL+DMY +CG +N A F+ ++V +WN+++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571
Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
Y G+G V+EL MV V+P+E+TFI+L CS S MV +G+ F KM +
Sbjct: 572 GYSERGQGSMVVELFDRMVKS-----RVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-E 625
Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
DYG+ P+ HYACVVDLLGRAG++++A++ I MP D A W +LL ACRIH +++G
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA-VWGALLNACRIHHKIDLG 684
Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
E++AQ++F L+ +Y+LL N+Y+ W + VR+ MKE G+ + GCSW+E +
Sbjct: 685 ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Query: 759 IHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKL 818
+H FL+ D H Q+++++ LE E+M + G + + E ++ + CGHSE+
Sbjct: 745 VHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERK 804
Query: 819 AIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSC 878
AIAFG++NT PG I V KNL +C +CH KFISK REI +RD FHHFK+G CSC
Sbjct: 805 AIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSC 864
Query: 879 GD 880
GD
Sbjct: 865 GD 866
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 281/565 (49%), Gaps = 36/565 (6%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMT-RSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
SW + A+ F EA+ Y M ++PD + FP VL+ GI DL+ GK++H H
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
VV+YGY L + V N L+ MY KCG D+ +FDR+ +D +SWN+MI+ G
Sbjct: 222 VVRYGYEL-DIDVVNALITMYVKCG-DVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
LE F M +V+P TL SV AC L R RLGR +H + G + + N
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCN 336
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+L MY G +A+ LF E +D+VSW T++S N +A+ R M +KP
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D +++A+VL AC+ L LDTG E+H A++ LI V + L++MY C+ ++ +
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKAR-LISYVIVANNLINMYSKCKCIDKALDI 455
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
F I K + W ++I G N EAL+ +M+ L PNA T+++ + AC R A
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGA 513
Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
+ IH H ++ G+G D ++ NAL+DMY R GR+ + + F+ + +D SWN ++TG
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTG 572
Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
Y+ GQ + L M R +P+ IT +++L GC +
Sbjct: 573 YSERGQGSMVVELFDRMVKS-----------------RVRPDEITFISLLCGCSKSQMVR 615
Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAY 580
+G + + ++ + +VD+ + G L A + MPV + W ++ A
Sbjct: 616 QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Query: 581 GMH-----GE--GQEVLELLKNMVA 598
+H GE Q + EL K V
Sbjct: 676 RIHHKIDLGELSAQHIFELDKKSVG 700
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 498 LRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNF 557
LR + + ++ C A +G ++++ A+ +M + V +G+A + M+ + G L
Sbjct: 88 LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVD 147
Query: 558 ARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALF 617
A VF M RN+ +WNV++ Y G E + L M+ G VKP+ TF +
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG----VKPDVYTFPCVL 203
Query: 618 AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFD 677
C ++ G ++ + YG E D ++ + + G V+ A L + MP
Sbjct: 204 RTCGGIPDLARGKEVHVHVV-RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR-- 260
Query: 678 KAGAWSSLL------GACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
+W++++ G C H+ +E+ A ++PD+ + L+++ S+ +L
Sbjct: 261 DIISWNAMISGYFENGMC--HEGLEL--FFAMRGLSVDPDLMT----LTSVISACEL 309
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/846 (33%), Positives = 452/846 (53%), Gaps = 45/846 (5%)
Query: 47 ESLRSEARSNQFREAILSY----IEMTRSD-IQP--DNFAFPAVLKAVAGIQDLSLGKQI 99
++ R R N+ R+ S +++ SD I P D+ A+ A+L+ D K I
Sbjct: 12 QTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAI 71
Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
H ++K G L + N L+N Y K G D D +FD + E++ VS+ ++
Sbjct: 72 HCDILKKGSCLD-LFATNILLNAYVKAGFDK-DALNLFDEMPERNNVSFVTLAQGYACQD 129
Query: 160 KWDLALEAFRMMLYSNVEP-SSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
L R N +SF + V+L D + +H +++G + N
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSL--------DKAEICPWLHSPIVKLGYDSNA 181
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
F+ AL+ Y+ G VD A+T+F+ +D+V W IVS +N F +++ L M +
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
G P+ + + L A L D K +H L+ ++D VG L+ +Y ++
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR-VGVGLLQLYTQLGDMSD 300
Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
+VF+ + + W+ MI + QN + EA+ LFI+M E A + PN T+SS++ C
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AFVVPNEFTLSSILNGCA 359
Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNT 457
+ E +HG +K+G D YV NAL+D+Y++ +++ + +F ++ ++ VSWNT
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNT 419
Query: 458 MITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGAL 517
+I GY G+ G A + RE RN V +T + L C +L
Sbjct: 420 VIVGYENLGEGGKAFSMFREAL-------RNQV----------SVTEVTFSSALGACASL 462
Query: 518 SALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVII 577
+++ G ++H AI+ A V V ++L+DMYAKCG + FA+ VF+ M +V +WN +I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 578 MAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
Y HG G++ L +L M + + KPN +TF+ + + CS++G++ +G + F M
Sbjct: 523 SGYSTHGLGRQALRILDIM-----KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMI 577
Query: 638 DDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEI 697
D+GIEP +HY C+V LLGR+G+++ A +LI +P E W ++L A N E
Sbjct: 578 RDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE-PSVMIWRAMLSASMNQNNEEF 636
Query: 698 GEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGD 757
+A+ + + P + YVL+SN+Y+ A+ W +RK MKEMGV+KEPG SWIE
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 758 EIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
++H F G H + ++G LE L+ + + GYVPD + VL ++++EEK+ L HSE+
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSER 756
Query: 818 LAIAFGILNTPPG-TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
LA+A+G++ P I + KNLR+C+DCH A K IS I R++++RD+ RFHHF G C
Sbjct: 757 LALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVC 816
Query: 877 SCGDYW 882
SCGD+W
Sbjct: 817 SCGDHW 822
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 10/359 (2%)
Query: 41 CKE--SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQ 98
CK+ W + + F +++ M + P+N+ F LKA G+ K
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 99 IHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRF 158
+H ++K Y L V L+ +Y + G DM D +KVF+ + + D V W+ MIA C+
Sbjct: 269 VHGQILKTCYVLDP-RVGVGLLQLYTQLG-DMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNT 217
G + A++ F M + V P+ FTL S+ C+ + + G LG Q+HG ++VG + +
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSG--LGEQLHGLVVKVGFDLDI 383
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
++ NAL+ +YAK ++D A LF ++ VSWNT++ + +A R+
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
+ V+ +S L AC+ L +D G ++H A++ + V ++L+DMY C +++
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKF 502
Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
+ VF+ + +A WNA+I+GY + +AL + M++ PN T V+ C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD-RDCKPNGLTFLGVLSGC 560
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 275/805 (34%), Positives = 440/805 (54%), Gaps = 46/805 (5%)
Query: 90 IQDLSLGKQIHAHVVKYGYGLSSVTVA-NTLVNMYGKCGSDMWDVYKVFDRITEKDQVSW 148
++DL Q+ A Y TV+ NT+++ + K G D+ +FD + ++ V+W
Sbjct: 55 VEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG-DVSSARDLFDAMPDRTVVTW 113
Query: 149 NSMIATLCRFGKWDLALEAFRMMLYSN--VEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206
++ R +D A + FR M S+ P T ++ C++ ++ + QVH
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG---QVH 170
Query: 207 GNSLRVG-EWNTF--IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
++++G + N F + N L+ Y ++ R+D A LF+ ++D V++NT+++ ++
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGL 230
Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
+ E++ +M G +P + + VL A L G+++HA ++ D S VG+
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS-VGN 289
Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL- 382
++D Y V R +FD + + +N +I+ Y Q + E +L F +M+ G
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ-CMGFD 348
Query: 383 ---WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEI 439
+P AT +S + A + S + +H A+ +V N+L+DMY++ E
Sbjct: 349 RRNFPFATMLS--IAANLSSLQMGRQ--LHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 440 SKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLR 499
++ IF + R TVSW +I+GY G HG L L +M+ +N+
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG-------SNL--------- 448
Query: 500 PKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFAR 559
+ + T TVL + ++L GK++HA+ IR+ +V GS LVDMYAKCG + A
Sbjct: 449 -RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 560 RVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAA 619
+VF+ MP RN ++WN +I A+ +G+G+ + M+ G ++P+ V+ + + A
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG-----LQPDSVSILGVLTA 562
Query: 620 CSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKA 679
CSH G V +G + F M YGI P HYAC++DLLGR G+ +A +L++ MP E D+
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 680 GAWSSLLGACRIHQNVEIGEIAAQNLFLLEP--DVASHYVLLSNIYSSAQLWDKAMDVRK 737
WSS+L ACRIH+N + E AA+ LF +E D A+ YV +SNIY++A W+K DV+K
Sbjct: 623 -MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA-YVSMSNIYAAAGEWEKVRDVKK 680
Query: 738 KMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSC 797
M+E G++K P SW+E +IH F + D +H +++ + L+ + +EGY PDTS
Sbjct: 681 AMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSS 740
Query: 798 VLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIES 857
V+ +V+E+ K L HSE+LA+AF +++TP G I V KNLR C DCH A K ISKI
Sbjct: 741 VVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVK 800
Query: 858 REIILRDVRRFHHFKNGTCSCGDYW 882
REI +RD RFHHF G CSCGDYW
Sbjct: 801 REITVRDTSRFHHFSEGVCSCGDYW 825
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 223/438 (50%), Gaps = 22/438 (5%)
Query: 58 FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
+ E+I +++M +S QP +F F VLKAV G+ D +LG+Q+HA V G+ +V N
Sbjct: 231 YTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDASVGN 289
Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
+++ Y K + + +FD + E D VS+N +I++ + +++ +L FR M +
Sbjct: 290 QILDFYSK-HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNS-LRVGEWNTFIMNALMAMYAKLGRVDDA 236
+F ++ +NLS L++GRQ+H + L + + N+L+ MYAK ++A
Sbjct: 349 RRNFPFATMLSIAANLS---SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEA 405
Query: 237 KTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHL 296
+ +FKS R VSW ++S Q + +M ++ D + A+VL A +
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 297 EMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAM 356
L GK++HA+ +R+ L +N F GS LVDMY C ++ +VF+ + D+ WNA+
Sbjct: 466 ASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVR-------SEAFPDKEGIH 409
I+ + N E A+ F KM E +GL P++ ++ V+ AC +E F I+
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIE-SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 410 GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQH 468
G K + Y ++D+ R GR ++ + D+M D + W++++ I
Sbjct: 584 GITPK----KKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 469 GDALMLLREMQNMEEEKN 486
A ++ +ME+ ++
Sbjct: 638 SLAERAAEKLFSMEKLRD 655
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 8/258 (3%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
+ S ++++Q+ ++ + EM NF F +L A + L +G+Q+H +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LAT 381
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYK-VFDRITEKDQVSWNSMIATLCRFGKWDLALEA 167
S + V N+LV+MY KC +M++ + +F + ++ VSW ++I+ + G L+
Sbjct: 382 ADSILHVGNSLVDMYAKC--EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 168 FRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAM 226
F M SN+ T +V A ++ + L LG+Q+H +R G N F + L+ M
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFA---SLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 227 YAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSI 286
YAK G + DA +F+ DR+ VSWN ++S+ + N A+ +M G++PD VSI
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 287 ASVLPACSHLEMLDTGKE 304
VL ACSH ++ G E
Sbjct: 557 LGVLTACSHCGFVEQGTE 574
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 382 LWPNATTMSSVVPACVRS------EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMG 435
L+ N+ + S A +R F D + IK G D N +++ R G
Sbjct: 3 LYCNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRG 62
Query: 436 RIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN--------MEEEKNR 487
++ ++ ++D+M ++TVS NTMI+G+ G A L M + + R
Sbjct: 63 QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 488 NNVYDLDETVLRPK--------PNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD- 538
N+ +D + R P+ +T T+LPGC ++HA+A++ T+
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 539 -VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
+ V + L+ Y + L+ A +F+ +P ++ +T+N +I Y G E + L M
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 598 AEGSRGGEVKPNEVTFIALFAA 619
G +P++ TF + A
Sbjct: 243 QSGH-----QPSDFTFSGVLKA 259
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/645 (38%), Positives = 377/645 (58%), Gaps = 36/645 (5%)
Query: 246 RDLVSWNTIVSSLSQND--KFLEAVMFLRQMA--LRG--IKPDGVSIASVLPACSHLEML 299
R L S VS S+++ KF + LR + L G I D ++L C+ ++L
Sbjct: 17 RRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLL 76
Query: 300 DTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITG 359
G+ +HA+ L++ I + +G+ L++MY C +E R+VF+ + + W +I+G
Sbjct: 77 IQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 360 YGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGR 419
Y Q++ +AL+ F +M G PN T+SSV+ A +HG +K G
Sbjct: 136 YSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 420 DRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQ 479
+ +V +AL+D+Y+R G ++ ++ +FD +E R+ VSWN +I G+ AL L + M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM- 253
Query: 480 NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLAT 537
LR +P+ + ++ C + L +GK +HAY I++
Sbjct: 254 ------------------LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 538 DVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMV 597
G+ L+DMYAK G ++ AR++FD + R+V++WN ++ AY HG G+E + + M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 598 AEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLG 657
G ++PNE++F+++ ACSHSG++ EG + MK D GI P HY VVDLLG
Sbjct: 356 RVG-----IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 658 RAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYV 717
RAG + A + I MP E A W +LL ACR+H+N E+G AA+++F L+PD +V
Sbjct: 410 RAGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 718 LLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHG 777
+L NIY+S W+ A VRKKMKE GV+KEP CSW+E + IH F+A D H Q E++
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 778 FLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAK 837
E + ++++ GYVPDTS V+ +V+++E+E L HSEK+A+AF +LNTPPG+TI + K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 838 NLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
N+RVC DCH A K SK+ REII+RD RFHHFK+G CSC DYW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 229/437 (52%), Gaps = 22/437 (5%)
Query: 30 TSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAG 89
SLP P S+ +S ESL+ + R S ++ S I D + +LK
Sbjct: 20 NSLPAPVSE----DSEDESLKFPSNDLLLRT---SSNDLEGSYIPADRRFYNTLLKKCTV 72
Query: 90 IQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWN 149
+ L G+ +HAH+++ + + + NTL+NMY KCGS + + KVF+++ ++D V+W
Sbjct: 73 FKLLIQGRIVHAHILQSIF-RHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWT 130
Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
++I+ + + AL F ML P+ FTL SV A + + R G G Q+HG
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGC-CGHQLHGFC 187
Query: 210 LRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAV 268
++ G + N + +AL+ +Y + G +DDA+ +F + E R+ VSWN +++ ++ +A+
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 269 MFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN-DILIDNSFVGSALVD 327
+ M G +P S AS+ ACS L+ GK +HAY +++ + L+ +F G+ L+D
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLD 305
Query: 328 MYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNAT 387
MY + R++FD ++ + + WN+++T Y Q+ + +EA+ F +M V G+ PN
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEI 364
Query: 388 TMSSVVPACVRSEAFPDKEGIHGHAI--KLGLGRDRYVQNALMDMYSRMGRIEISKTIFD 445
+ SV+ AC S EG H + + K G+ + + ++D+ R G + + +
Sbjct: 365 SFLSVLTACSHSGLL--DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 446 DMEVRDTVS-WNTMITG 461
+M + T + W ++
Sbjct: 423 EMPIEPTAAIWKALLNA 439
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 21/384 (5%)
Query: 202 GRQVHGNSLRVGEWNTFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQ 260
GR VH + L+ + +M N L+ MYAK G +++A+ +F+ RD V+W T++S SQ
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 261 NDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF 320
+D+ +A++F QM G P+ +++SV+ A + G ++H + ++ N
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDSNVH 197
Query: 321 VGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVA 380
VGSAL+D+Y ++ + VFD + + WNA+I G+ + E+AL LF M
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR-D 256
Query: 381 GLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
G P+ + +S+ AC + + +H + IK G + N L+DMY++ G I +
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 441 KTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRP 500
+ IFD + RD VSWN+++T Y G +A+ EM+ +
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-----------------I 359
Query: 501 KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARR 560
+PN I+ ++VL C L +G + ++ + + +VD+ + G LN A R
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 561 VFDLMPVR-NVITWNVIIMAYGMH 583
+ MP+ W ++ A MH
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 396/712 (55%), Gaps = 28/712 (3%)
Query: 191 SNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYA--KLGRVDDAKTLFKSFEDRD 247
S + R LR +Q HG+ +R G + + + + L AM A ++ A+ +F +
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 248 LVSWNTIVSSLSQN-DKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIH 306
+WNT++ + + D L FL ++ P+ + ++ A + + L G+ +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 307 AYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYD 366
A+++ + D FV ++L+ Y +C +++ +VF I +K + WN+MI G+ Q
Sbjct: 155 GMAVKSAVGSD-VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 367 EEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNA 426
++AL LF KME + + TM V+ AC + + + + + + + NA
Sbjct: 214 DKALELFKKMES-EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 427 LMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME---- 482
++DMY++ G IE +K +FD ME +D V+W TM+ GY I + A +L M +
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 483 -------EEKNRNN----VYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
E+ + N V+ + K N ITL++ L C + AL G+ IH+Y
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLE 591
++ + + V SAL+ MY+KCG L +R VF+ + R+V W+ +I MHG G E ++
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYAC 651
+ M + VKPN VTF +F ACSH+G+V E LF++M+ +YGI P HYAC
Sbjct: 453 MFYKM-----QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 652 VVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPD 711
+VD+LGR+G +E A + I MP W +LLGAC+IH N+ + E+A L LEP
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIP-PSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Query: 712 VASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQ 771
+VLLSNIY+ W+ ++RK M+ G++KEPGCS IE IH+FL+GD +H
Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 626
Query: 772 SEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEE-KETLLCGHSEKLAIAFGILNTPPG 830
SE+++G L + E+++ GY P+ S VL + EEE KE L HSEKLAI +G+++T
Sbjct: 627 SEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 686
Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
IRV KNLRVC DCH K IS++ REII+RD RFHHF+NG CSC D+W
Sbjct: 687 KVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 241/494 (48%), Gaps = 54/494 (10%)
Query: 10 LLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIEM- 68
L LSS + + +P P S +W +R+ A +I ++++M
Sbjct: 68 LFAMAALSSFASLEYARKVFDEIPKPNSF-----AWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 69 TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGS 128
+ S P+ + FP ++KA A + LSLG+ +H VK G S V VAN+L++ Y CG
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCG- 180
Query: 129 DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL 188
D+ KVF I EKD VSWNSMI + G D ALE F+ M +V+ S T+V V
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 189 ACSNLSRRDGLRLGRQV----HGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE 244
AC+ + L GRQV N + V N + NA++ MY K G ++DAK LF + E
Sbjct: 241 ACAKIR---NLEFGRQVCSYIEENRVNV---NLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 245 D-------------------------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
+ +D+V+WN ++S+ QN K EA++ +
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 274 MAL-RGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNC 332
+ L + +K + +++ S L AC+ + L+ G+ IH+Y ++ I + N V SAL+ MY C
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSALIHMYSKC 413
Query: 333 REVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSV 392
++E R VF+ + + + +W+AMI G + EA+ +F KM+E A + PN T ++V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE-ANVKPNGVTFTNV 472
Query: 393 VPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
AC + + E + H G+ + ++D+ R G +E + + M +
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532
Query: 452 TVS-WNTMITGYTI 464
+ S W ++ I
Sbjct: 533 STSVWGALLGACKI 546
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/672 (38%), Positives = 376/672 (55%), Gaps = 63/672 (9%)
Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
N+ + LM YA L V A+ +F +R+++ N ++ S N + E V M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
++PD + VL ACS + G++IH A + L FVG+ LV MY C +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFL 191
Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
R V D +S + + WN+++ GY QN+ ++AL + +ME V + +A TM+S++PA
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK-ISHDAGTMASLLPA 250
Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
+ E + YV+ DM+ +MG+ + VSW
Sbjct: 251 VSNTTT----ENV------------MYVK----DMFFKMGK-------------KSLVSW 277
Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
N MI Y +A+ L M+ E P+++++ +VLP CG
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFE-----------------PDAVSITSVLPACG 320
Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
SAL+ GK+IH Y R L ++++ +AL+DMYAKCGCL AR VF+ M R+V++W
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
+I AYG G G + + L + G + P+ + F+ AACSH+G++ EG F
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSG-----LVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
M D Y I P +H AC+VDLLGRAGKV++AY+ I M E ++ W +LLGACR+H +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER-VWGALLGACRVHSDT 494
Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
+IG +AA LF L P+ + +YVLLSNIY+ A W++ ++R MK G++K PG S +E
Sbjct: 495 DIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHS 815
IH FL GD SH QS++++ L+ L ++M++ GYVPD+ LH+V EE+KET L HS
Sbjct: 555 NRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHS 614
Query: 816 EKLAIAFGILNTP-----PGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHH 870
EKLAI F ++NT TIR+ KNLR+C DCH A K IS+I SREII+RD RFH
Sbjct: 615 EKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 674
Query: 871 FKNGTCSCGDYW 882
F+ G CSCGDYW
Sbjct: 675 FRFGVCSCGDYW 686
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 171/348 (49%), Gaps = 39/348 (11%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
+RS + + E + + M +++PD++ FP VLKA + + +G++IH K G
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
S++ V N LV+MYGKCG + + V D ++ +D VSWNS++ + ++D ALE
Sbjct: 172 S-STLFVGNGLVSMYGKCGF-LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYA 228
R M + + T+ S+ A SN + + MY
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNTTTEN---------------------------VMY- 261
Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
K +F + LVSWN ++ +N +EAV +M G +PD VSI S
Sbjct: 262 -------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITS 314
Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
VLPAC L GK+IH Y R LI N + +AL+DMY C +E R VF+ + +
Sbjct: 315 VLPACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC 396
+ W AMI+ YG + +A+ LF K+++ +GL P++ + + AC
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAAC 420
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 60 EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
EA L EM+R D+ N + L + +++ + + + G T+A+ L
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG----TMASLL 248
Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
+ ++ V +F ++ +K VSWN MI + A+E + M EP
Sbjct: 249 PAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKT 238
+ ++ SV AC + S L LG+++HG R N + NAL+ MYAK G ++ A+
Sbjct: 309 AVSITSVLPACGDTS---ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 239 LFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEM 298
+F++ + RD+VSW ++S+ + + +AV ++ G+ PD ++ + L ACSH +
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 299 LDTGK 303
L+ G+
Sbjct: 426 LEEGR 430
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/762 (33%), Positives = 425/762 (55%), Gaps = 46/762 (6%)
Query: 130 MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALA 189
M D ++FD + + D WN MI G + A++ + M+++ V+ +FT V +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 190 CSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDL 248
+ +S L G+++H +++G + ++ N+L+++Y KLG DA+ +F+ +RD+
Sbjct: 140 VAGIS---SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 249 VSWNTIVSS-LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHA 307
VSWN+++S L+ D F ++M ++M G KPD S S L ACSH+ GKEIH
Sbjct: 197 VSWNSMISGYLALGDGF-SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 308 YALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDE 367
+A+R+ I + V ++++DMY EV R+F+ + + I WN MI Y +N
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 368 EALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL 427
+A + F KM E GL P+ T +++PA A + IHG+A++ G ++ AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 428 MDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNR 487
+DMY G+++ ++ IFD M ++ +SWN++I Y G++ AL L +E+
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL--------- 422
Query: 488 NNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
D +++ P+S T+ ++LP +L++G+EIHAY +++ ++ ++ ++LV
Sbjct: 423 -----WDSSLV---PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
MYA CG L AR+ F+ + +++V++WN IIMAY +HG G+ + L M+A V
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-----SRVN 529
Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
PN+ TF +L AACS SGMV EG + F MK +YGI+P +HY C++DL+GR G A +
Sbjct: 530 PNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589
Query: 668 LINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQ 727
+ MP A W SLL A R H+++ I E AA+ +F +E D YVLL N+Y+ A
Sbjct: 590 FLEEMPF-VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 728 LWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
W+ ++ M+ G+ + S +E + H F GD SH + +++ L+ +S RM
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS-RM- 706
Query: 788 KEGYVPDTSCVLHNVNEEEKETLLCG-------HSEKLAIAFGILNTPPGTTIRVAKNLR 840
V + +H V+ ETL+ HS +LA FG+++T G + V N R
Sbjct: 707 ----VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTR 762
Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
+C CH+ + S++ REI++ D + FHHF NG CSCG+YW
Sbjct: 763 ICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 323/645 (50%), Gaps = 59/645 (9%)
Query: 58 FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
+ EA+ Y M + ++ D F +P V+K+VAGI L GK+IHA V+K G+ +S V V N
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCN 169
Query: 118 TLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
+L+++Y K G WD KVF+ + E+D VSWNSMI+ G +L F+ ML +
Sbjct: 170 SLISLYMKLGC-AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSL--RVGEWNTFIMNALMAMYAKLGRVDD 235
P F+ +S ACS++ ++G+++H +++ R+ + +M +++ MY+K G V
Sbjct: 229 PDRFSTMSALGACSHVY---SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPACS 294
A+ +F R++V+WN ++ ++N + +A + ++M+ + G++PD ++ ++LPA +
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
LE G+ IH YA+R L + + +AL+DMY C +++ +FD +++K + WN
Sbjct: 346 ILE----GRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIK 414
++I Y QN + AL LF ++ + + L P++TT++S++PA S + + IH + +K
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWD-SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 415 LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALML 474
+ + N+L+ MY+ G +E ++ F+ + ++D VSWN++I Y + G ++ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 475 LREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
EM R PN T ++L C + +G E R
Sbjct: 520 FSEM-----------------IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 535 -LATDVVVGSALVDMYAKCGCLNFARRVFDLMP-VRNVITWNVIIMA------------- 579
+ + ++D+ + G + A+R + MP V W ++ A
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 580 ----YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI----ALFAACSHSGMVSEGMD 631
+ M + LL NM AE R +V N + + + S S + ++G
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDV--NRIKLLMESKGISRTSSRSTVEAKGKS 680
Query: 632 LFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAY-QLINMMPPE 675
+ D + + + V+D++ R ED Y ++ + PE
Sbjct: 681 HVFTNGDRSHVATNKIYE--VLDVVSRMVGEEDIYVHCVSRLRPE 723
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 181/362 (50%), Gaps = 32/362 (8%)
Query: 329 YCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATT 388
+ + R +E ++FD ++ LWN MI G+ EA+ + +M AG+ + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFT 132
Query: 389 MSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
V+ + + + + IH IKLG D YV N+L+ +Y ++G ++ +F++M
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 449 VRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLM 508
RD VSWN+MI+GY G +LML +EM KP+ + M
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-----------------FKPDRFSTM 235
Query: 509 TVLPGCGALSALAKGKEIHAYAIRNMLAT-DVVVGSALVDMYAKCGCLNFARRVFDLMPV 567
+ L C + + GKEIH +A+R+ + T DV+V ++++DMY+K G +++A R+F+ M
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 568 RNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVS 627
RN++ WNV+I Y +G + + M S ++P+ +T I L A + +
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKM----SEQNGLQPDVITSINLLPASA----IL 347
Query: 628 EGMDLF-YKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLL 686
EG + Y M+ G P ++D+ G G+++ A + + M + +W+S++
Sbjct: 348 EGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK--NVISWNSII 403
Query: 687 GA 688
A
Sbjct: 404 AA 405
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + + ++ + A+ + E+ S + PD+ ++L A A LS G++IHA++
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
VK Y S+ + N+LV+MY CG D+ D K F+ I KD VSWNS+I G +
Sbjct: 458 VKSRY-WSNTIILNSLVHMYAMCG-DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACS 191
++ F M+ S V P+ T S+ ACS
Sbjct: 516 SVWLFSEMIASRVNPNKSTFASLLAACS 543
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/629 (38%), Positives = 370/629 (58%), Gaps = 28/629 (4%)
Query: 255 VSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
+S L N + EA++ +MA+ G + ++L AC L G+ +HA+ ++
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFI 374
L +++ + L+ Y C +E R+V D + +K + W AMI+ Y Q + EAL +F
Sbjct: 84 L-PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 375 KMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRM 434
+M G PN T ++V+ +C+R+ + IHG +K +V ++L+DMY++
Sbjct: 143 EMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 435 GRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLD 494
G+I+ ++ IF+ + RD VS +I GY G +AL + + +
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS-------------- 247
Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
E + PN +T ++L L+ L GK+ H + +R L V+ ++L+DMY+KCG
Sbjct: 248 EGM---SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
L++ARR+FD MP R I+WN +++ Y HG G+EVLEL + M E VKP+ VT +
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK----RVKPDAVTLL 360
Query: 615 ALFAACSHSGMVSEGMDLFYKM-KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMP 673
A+ + CSH M G+++F M +YG +P +HY C+VD+LGRAG++++A++ I MP
Sbjct: 361 AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 674 PEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAM 733
+ AG SLLGACR+H +V+IGE + L +EP+ A +YV+LSN+Y+SA W
Sbjct: 421 SK-PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVN 479
Query: 734 DVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVP 793
+VR M + V KEPG SWI+ +H F A D +H + E++ ++ +S +M++ GYVP
Sbjct: 480 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVP 539
Query: 794 DTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFIS 853
D SCVL++V+EE+KE +L GHSEKLA+ FG++ T G IRV KNLR+C DCH K S
Sbjct: 540 DLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFS 599
Query: 854 KIESREIILRDVRRFHHFKNGTCSCGDYW 882
K+ RE+ LRD RFH +G CSCGDYW
Sbjct: 600 KVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 209/406 (51%), Gaps = 22/406 (5%)
Query: 55 SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
+ + +EA+L EM + + A+L A + L G+++HAH++K Y L +
Sbjct: 33 NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY-LPATY 88
Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
+ L+ YGKC + D KV D + EK+ VSW +MI+ + G AL F M+ S
Sbjct: 89 LRTRLLIFYGKCDC-LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN----TFIMNALMAMYAKL 230
+ +P+ FT +V +C R GL LG+Q+HG + +WN F+ ++L+ MYAK
Sbjct: 148 DGKPNEFTFATVLTSCI---RASGLGLGKQIHG---LIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 231 GRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVL 290
G++ +A+ +F+ +RD+VS I++ +Q EA+ ++ G+ P+ V+ AS+L
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 291 PACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
A S L +LD GK+ H + LR ++ + + ++L+DMY C + RR+FD + ++
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPF-YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPAC----VRSEAFPDKE 406
WNAM+ GY ++ E L LF M + + P+A T+ +V+ C + +
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380
Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT 452
G+ G + Y ++DM R GRI+ + M + T
Sbjct: 381 GMVAGEYGTKPGTEHY--GCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 7/264 (2%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + +++ EA+ + EM RSD +P+ F F VL + L LGKQIH +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
VK+ Y S + V ++L++MY K G + + ++F+ + E+D VS ++IA + G +
Sbjct: 180 VKWNYD-SHIFVGSSLLDMYAKAG-QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
ALE F + + P+ T S+ A S L+ D G+Q H + LR + + N+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH---GKQAHCHVLRRELPFYAVLQNS 294
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA-LRGIKP 281
L+ MY+K G + A+ LF + +R +SWN ++ S++ E + R M + +KP
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 282 DGVSIASVLPACSHLEMLDTGKEI 305
D V++ +VL CSH M DTG I
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNI 378
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/758 (34%), Positives = 412/758 (54%), Gaps = 32/758 (4%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W + S R+ +A+ Y +M + PD FP ++KA +++ + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDV-YKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
G + VA++L+ Y + G DV K+FDR+ +KD V WN M+ + G D
Sbjct: 166 SLGMDCNEF-VASSLIKAYLEYGK--IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
++ F +M + P++ T V C++ D LG Q+HG + G ++ I N+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID---LGVQLHGLVVVSGVDFEGSIKNS 279
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
L++MY+K GR DDA LF+ D V+WN ++S Q+ E++ F +M G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
++ +S+LP+ S E L+ K+IH Y +R+ I +D F+ SAL+D Y CR V + +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD-IFLTSALIDAYFKCRGVSMAQNIF 398
Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
+ + ++ AMI+GY N ++L +F + +V + PN T+ S++P A
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLAL 457
Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
+HG IK G + A++DMY++ GR+ ++ IF+ + RD VSWN+MIT
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
A+ + R+M YD +++ L C L + +
Sbjct: 518 AQSDNPSAAIDIFRQM------GVSGICYD-----------CVSISAALSACANLPSESF 560
Query: 523 GKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
GK IH + I++ LA+DV S L+DMYAKCG L A VF M +N+++WN II A G
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
HG+ ++ L L MV + ++P+++TF+ + ++C H G V EG+ F M +DYGI
Sbjct: 621 HGKLKDSLCLFHEMVEKSG----IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAA 702
+P +HYACVVDL GRAG++ +AY+ + MP D AG W +LLGACR+H+NVE+ E+A+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD-AGVWGTLLGACRLHKNVELAEVAS 735
Query: 703 QNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKF 762
L L+P + +YVL+SN +++A+ W+ VR MKE V+K PG SWIE H F
Sbjct: 736 SKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLF 795
Query: 763 LAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH 800
++GD +H +S ++ L +L +R EGY+P LH
Sbjct: 796 VSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 15/422 (3%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
+W + +S E++ + EM S + PD F ++L +V+ ++L KQIH ++
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 104 VKYGYGLSSVTVANTLVNMYGKC-GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
+++ L + + + L++ Y KC G M +F + D V + +MI+ G +
Sbjct: 367 MRHSISL-DIFLTSALIDAYFKCRGVSM--AQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF-IMN 221
+LE FR ++ + P+ TLVS+ L L+LGR++HG ++ G N I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILL---ALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
A++ MYAK GR++ A +F+ RD+VSWN++++ +Q+D A+ RQM + GI
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D VSI++ L AC++L GK IH + +++ L + + S L+DMY C ++ V
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHS-LASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
F + +K I WN++I G + +++L LF +M E +G+ P+ T ++ +C
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659
Query: 402 FPDKEGI---HGHAIKLGLGRDRYVQNALMDMYSRMGRI-EISKTIFDDMEVRDTVSWNT 457
EG+ G+ + ++D++ R GR+ E +T+ D W T
Sbjct: 660 V--DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 458 MI 459
++
Sbjct: 718 LL 719
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 26/335 (7%)
Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV-ECGRRVFDF-IS 346
+L ACS+ +L GK++HA+ + N I D S+ ++ MY C +CG+ + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGD-SYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 347 DKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE 406
I WN++I+ + +N +AL + KM G+ P+ +T +V ACV + F +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKM-LCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICG 466
+ LG+ + +V ++L+ Y G+I++ +FD + +D V WN M+ GY CG
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 467 QHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEI 526
+ M+ +D+ PN++T VL C + + G ++
Sbjct: 219 ALDSVIKGFSVMR-------------MDQI----SPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 527 HAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
H + + + + + ++L+ MY+KCG + A ++F +M + +TWN +I Y G
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
+E L M++ G V P+ +TF +L + S
Sbjct: 322 EESLTFFYEMISSG-----VLPDAITFSSLLPSVS 351
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 487 RNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALV 546
RN+ L+ET+ P ++L+ L C + L +GK++HA+ I N ++ D ++
Sbjct: 24 RNSSRFLEETI----PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERIL 77
Query: 547 DMYAKCGCLNFARRVFDLMPVR--NVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGG 604
MYA CG + ++F + +R ++ WN II ++ +G + L M+ G
Sbjct: 78 GMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG---- 133
Query: 605 EVKPNEVTFIALFAAC 620
V P+ TF L AC
Sbjct: 134 -VSPDVSTFPCLVKAC 148
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/634 (37%), Positives = 365/634 (57%), Gaps = 33/634 (5%)
Query: 251 WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYAL 310
WN + L+ F E++ R M G PD S +L +C+ L + +G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDF--ISDKKIALWNAMITGYGQNEYDEE 368
+ + FV +AL+ MYC C V R+VF+ S + +NA+I+GY N +
Sbjct: 81 KGGCETE-PFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
A +F +M+E G+ ++ TM +VP C E +HG +K GL + V N+ +
Sbjct: 140 AAYMFRRMKE-TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRN 488
MY + G +E + +FD+M V+ ++WN +I+GY+ G D L L +M++
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-------- 250
Query: 489 NVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDM 548
+ + P P TL++VL C L A G E+ N +V V +A + M
Sbjct: 251 -------SGVCPDP--FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 549 YAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKP 608
YA+CG L AR VFD+MPV+++++W +I YGMHG G+ L L +M+ G ++P
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-----IRP 356
Query: 609 NEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
+ F+ + +ACSHSG+ +G++LF MK +Y +EP P+HY+C+VDLLGRAG++++A +
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 669 INMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQL 728
I MP E D A W +LLGAC+IH+NV++ E+A + EP+ +YVL+SNIYS ++
Sbjct: 417 IESMPVEPDGA-VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475
Query: 729 WDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRK 788
+ +R M+E RK+PG S++E +H FLAGD SH+Q+E++H L+ L
Sbjct: 476 QEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL------ 529
Query: 789 EGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQA 848
E V + + + EE + HSE+LAIAFGILN+ PGT I V KNLRVC DCH
Sbjct: 530 ETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVF 589
Query: 849 TKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
K +SKI R+ ++RD RFH+FK+G CSC DYW
Sbjct: 590 LKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 215/469 (45%), Gaps = 24/469 (5%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W LR A + F E+I Y M RS PD F+FP +LK+ A + G+Q+H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVS--WNSMIATLCRFGKWD 162
K G V L++MY KCG + D KVF+ + Q+S +N++I+ K
Sbjct: 81 KGGCETEPF-VLTALISMYCKCGL-VADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
A FR M + V S T++ + C+ + L LGR +HG ++ G + ++N
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCT---VPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+ + MY K G V+ + LF + L++WN ++S SQN + + QM G+ P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D ++ SVL +C+HL G E+ N + N FV +A + MY C + R V
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAV 314
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
FD + K + W AMI YG + E LMLF M + G+ P+ V+ AC S
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHS-G 372
Query: 402 FPDKEGIH-----GHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSW 455
DK G+ KL G + Y + L+D+ R GR++ + + M V D W
Sbjct: 373 LTDK-GLELFRAMKREYKLEPGPEHY--SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 456 NTMITGYTICGQHGDALML-LREMQNMEEEKNRNNVYDLDETVLRPKPN 503
++ C H + M L + +E E N Y L + N
Sbjct: 430 GALLGA---CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/716 (35%), Positives = 400/716 (55%), Gaps = 60/716 (8%)
Query: 203 RQVHGNSLRVGEWNT-FIMNALMA---MYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSL 258
R +H +++G NT + ++ L+ + + A ++FK+ ++ +L+ WNT+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 259 SQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN----DI 314
+ + + A+ M G+ P+ + VL +C+ + G++IH + L+ D+
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 315 LIDNSFVG--------------------------SALVDMYCNCREVECGRRVFDFISDK 348
+ S + +AL+ Y + +E +++FD I K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
+ WNAMI+GY + +EAL LF M + + P+ +TM +VV AC +S + +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
H G G + + NAL+D+YS+ G +E + +F+ + +D +SWNT+I GYT +
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
+AL+L +EM E PN +T++++LP C L A+ G+ IH
Sbjct: 349 KEALLLFQEMLRSGE-----------------TPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 529 YAIRNM--LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEG 586
Y + + + + ++L+DMYAKCG + A +VF+ + +++ +WN +I + MHG
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 587 QEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSP 646
+L M G ++P+++TF+ L +ACSHSGM+ G +F M DY + P
Sbjct: 452 DASFDLFSRMRKIG-----IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 647 DHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLF 706
+HY C++DLLG +G ++A ++INMM E D W SLL AC++H NVE+GE A+NL
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV-IWCSLLKACKMHGNVELGESFAENLI 565
Query: 707 LLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD 766
+EP+ YVLLSNIY+SA W++ R + + G++K PGCS IE +H+F+ GD
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625
Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
H ++ +++G LE + + K G+VPDTS VL + EE KE L HSEKLAIAFG+++
Sbjct: 626 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 685
Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
T PGT + + KNLRVC +CH+ATK ISKI REII RD RFHHF++G CSC DYW
Sbjct: 686 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 199 bits (507), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 206/395 (52%), Gaps = 53/395 (13%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W R A S+ A+ Y+ M + P+++ FP VLK+ A + G+QIH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR------------------------- 139
K G L + V +L++MY + G + D +KVFD+
Sbjct: 162 KLGCDLD-LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 140 ------ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNL 193
I KD VSWN+MI+ G + ALE F+ M+ +NV P T+V+V AC
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC--- 276
Query: 194 SRRDGLRLGRQVH--------GNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
++ + LGRQVH G++L+ I+NAL+ +Y+K G ++ A LF+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLK-------IVNALIDLYSKCGELETACGLFERLPY 329
Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEI 305
+D++SWNT++ + + + EA++ ++M G P+ V++ S+LPAC+HL +D G+ I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 306 HAYALRNDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNE 364
H Y + + N S + ++L+DMY C ++E +VF+ I K ++ WNAMI G+ +
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 365 YDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399
+ + LF +M ++ G+ P+ T ++ AC S
Sbjct: 450 RADASFDLFSRMRKI-GIQPDDITFVGLLSACSHS 483
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 226/503 (44%), Gaps = 77/503 (15%)
Query: 69 TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYG-----YGLSSVTVANTLVNMY 123
+ SD D+ L + + L + IHA ++K G Y LS + L +
Sbjct: 22 SSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF 81
Query: 124 GKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTL 183
+ VF I E + + WN+M AL+ + M+ + P+S+T
Sbjct: 82 ----EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 184 VSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLF-- 240
V +C+ + + G+Q+HG+ L++G + + ++ +L++MY + GR++DA +F
Sbjct: 138 PFVLKSCA---KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK 194
Query: 241 --------------------------KSFED---RDLVSWNTIVSSLSQNDKFLEAVMFL 271
K F++ +D+VSWN ++S ++ + EA+
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELF 254
Query: 272 RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS------AL 325
+ M ++PD ++ +V+ AC+ ++ G+++H + ID+ GS AL
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW-------IDDHGFGSNLKIVNAL 307
Query: 326 VDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPN 385
+D+Y C E+E +F+ + K + WN +I GY +EAL+LF +M +G PN
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPN 366
Query: 386 ATTMSSVVPACVRSEAFPDKEGIHGHAIKL--GLGRDRYVQNALMDMYSRMGRIEISKTI 443
TM S++PAC A IH + K G+ ++ +L+DMY++ G IE + +
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 444 FDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPN 503
F+ + + SWN MI G+ + G+ + L M+ + +P+
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK-----------------IGIQPD 469
Query: 504 SITLMTVLPGCGALSALAKGKEI 526
IT + +L C L G+ I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHI 492
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 141/265 (53%), Gaps = 8/265 (3%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW + A + ++EA+ + +M +++++PD V+ A A + LG+Q+H +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+G+G S++ + N L+++Y KCG ++ +F+R+ KD +SWN++I +
Sbjct: 293 DDHGFG-SNLKIVNALIDLYSKCG-ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH---GNSLRVGEWNTFIM 220
AL F+ ML S P+ T++S+ AC++L D +GR +H L+ + +
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAID---IGRWIHVYIDKRLKGVTNASSLR 407
Query: 221 NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
+L+ MYAK G ++ A +F S + L SWN ++ + + + + +M GI+
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 281 PDGVSIASVLPACSHLEMLDTGKEI 305
PD ++ +L ACSH MLD G+ I
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/632 (36%), Positives = 373/632 (59%), Gaps = 33/632 (5%)
Query: 258 LSQNDKFLEAVMFLRQMALRGI---KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDI 314
LS++ K EAV + + P+ + +L AC + L G +I + L N
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYT--DLLHACISAKSLHHGIKICSLILNNPS 162
Query: 315 LIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI---ALWNAMITGYGQNEYDEEALM 371
L N + S L+ ++ CR ++ R++FD ++D + +W AM GY +N +AL+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 372 LFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMY 431
+++ M + + P ++S + ACV + GIH +K D+ V N L+ +Y
Sbjct: 223 VYVDML-CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 432 SRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVY 491
G + ++ +FD M R+ V+WN++I+ + + + L R+MQ
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ------------ 329
Query: 492 DLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAK 551
+E + + TL T+LP C ++AL GKEIHA +++ DV + ++L+DMY K
Sbjct: 330 --EEMI---GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGK 384
Query: 552 CGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEV 611
CG + ++RRVFD+M +++ +WN+++ Y ++G +EV+ L + M+ G V P+ +
Sbjct: 385 CGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG-----VAPDGI 439
Query: 612 TFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINM 671
TF+AL + CS +G+ G+ LF +MK ++ + P+ +HYAC+VD+LGRAGK+++A ++I
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 672 MPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDK 731
MP + A W SLL +CR+H NV +GEIAA+ LF+LEP +YV++SNIY+ A++WD
Sbjct: 500 MPFK-PSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDN 558
Query: 732 AMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDG-SHQQSEQLHGFLENLSERMRKEG 790
+R+ MK+ GV+KE GCSW++ D+I F+AG G + S++ L E + K G
Sbjct: 559 VDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSG 618
Query: 791 YVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATK 850
Y P+TS VLH+V+EE K +CGHSE+LA + +++T G IR+ KNLRVC DCH K
Sbjct: 619 YSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMK 678
Query: 851 FISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
+S++ R I+LRD +RFHHF +G CSC DYW
Sbjct: 679 IVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 24/348 (6%)
Query: 135 KVFDRITEKDQVS---WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVAL-AC 190
K+FD +T+ ++ W +M R G AL + ML S +EP +F+ +SVAL AC
Sbjct: 188 KIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFS-ISVALKAC 246
Query: 191 SNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLV 249
+L LR+GR +H ++ E + + N L+ +Y + G DDA+ +F +R++V
Sbjct: 247 VDLK---DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303
Query: 250 SWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309
+WN+++S LS+ + E R+M I ++ ++LPACS + L TGKEIHA
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 310 LRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEA 369
L++ D + S L+DMY C EVE RRVFD + K +A WN M+ Y N EE
Sbjct: 364 LKSKEKPDVPLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 370 LMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIH-----GHAIKLGLGRDRYVQ 424
+ LF M E +G+ P+ T +++ C S+ + G+ ++ + Y
Sbjct: 423 INLFEWMIE-SGVAPDGITFVALLSGC--SDTGLTEYGLSLFERMKTEFRVSPALEHYA- 478
Query: 425 NALMDMYSRMGRIEISKTIFDDMEVRDTVS-WNTMITGYTICGQHGDA 471
L+D+ R G+I+ + + + M + + S W +++ C HG+
Sbjct: 479 -CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS---CRLHGNV 522
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 135/251 (53%), Gaps = 6/251 (2%)
Query: 53 ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSS 112
+R+ R+A++ Y++M S I+P NF+ LKA ++DL +G+ IHA +VK +
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQ 271
Query: 113 VTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
V V N L+ +Y + G D KVFD ++E++ V+WNS+I+ L + + FR M
Sbjct: 272 V-VYNVLLKLYMESGL-FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLG 231
+ S TL ++ ACS ++ L G+++H L+ E + ++N+LM MY K G
Sbjct: 330 EEMIGFSWATLTTILPACSRVA---ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
V+ ++ +F +DL SWN +++ + N E + M G+ PDG++ ++L
Sbjct: 387 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLS 446
Query: 292 ACSHLEMLDTG 302
CS + + G
Sbjct: 447 GCSDTGLTEYG 457
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 272/791 (34%), Positives = 425/791 (53%), Gaps = 56/791 (7%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW L ++ + ++I +++M R I+ D F +LK + ++D SLG QIH V
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
V+ G + V A+ L++MY K G + +VF I EK+ VSW+++IA + L
Sbjct: 207 VRVGCD-TDVVAASALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNA 222
AL+ F+ M N S SV +C+ LS LRLG Q+H ++L+ + + A
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCAALSE---LRLGGQLHAHALKSDFAADGIVRTA 321
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
+ MYAK + DA+ LF + E+ + S+N +++ SQ + +A++ ++ G+ D
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381
Query: 283 GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVF 342
+S++ V AC+ ++ L G +I+ A+++ + +D V +A +DMY C+ + RVF
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC-VANAAIDMYGKCQALAEAFRVF 440
Query: 343 DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
D + + WNA+I + QN E L LF+ M + + P+ T S++ AC
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTGGSLG 499
Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE----ISKTIFDDMEVRDT------ 452
E IH +K G+ + V +L+DMYS+ G IE I F V T
Sbjct: 500 YGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 453 ----------VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKP 502
VSWN++I+GY + Q DA ML M M P
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----------------ITP 601
Query: 503 NSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVF 562
+ T TVL C L++ GK+IHA I+ L +DV + S LVDMY+KCG L+ +R +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 563 DLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSH 622
+ R+ +TWN +I Y HG+G+E ++L + M+ E +KPN VTFI++ AC+H
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-----IKPNHVTFISILRACAH 716
Query: 623 SGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAW 682
G++ +G++ FY MK DYG++P HY+ +VD+LG++GKV+ A +LI MP E D W
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IW 775
Query: 683 SSLLGACRIHQN-VEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKE 741
+LLG C IH+N VE+ E A L L+P +S Y LLSN+Y+ A +W+K D+R+ M+
Sbjct: 776 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 835
Query: 742 MGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHN 801
++KEPGCSW+E DE+H FL GD +H + E+++ L + M+ D+S V
Sbjct: 836 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFVRGV 892
Query: 802 VNEEEKETLLC 812
EEE + C
Sbjct: 893 EVEEEDQWCYC 903
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 178/646 (27%), Positives = 295/646 (45%), Gaps = 87/646 (13%)
Query: 73 IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG----------------------- 109
+ NF+F V K A L LGKQ HAH++ G+
Sbjct: 46 VSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 110 -------LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
L V N ++N Y K +DM+ F+ + +D VSWNSM++ + G+
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSK-SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
++E F M +E T + CS L + LG Q+HG +RVG + + +
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFL---EDTSLGMQIHGIVVRVGCDTDVVAAS 219
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
AL+ MYAK R ++ +F+ +++ VSW+ I++ QN+ A+ F ++M
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
ASVL +C+ L L G ++HA+AL++D D V +A +DMY C ++ + +
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG-IVRTATLDMYAKCDNMQDAQIL 338
Query: 342 FDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEA 401
FD + +NAMITGY Q E+ +AL+LF ++ +GL + ++S V AC +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKG 397
Query: 402 FPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITG 461
+ I+G AIK L D V NA +DMY + + + +FD+M RD VSWN +I
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 462 YTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALA 521
+ G+ + L L M R +P+ T ++L C +L
Sbjct: 458 HEQNGKGYETLFLFVSMLRS-----------------RIEPDEFTFGSILKACTG-GSLG 499
Query: 522 KGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NV---------- 570
G EIH+ +++ +A++ VG +L+DMY+KCG + A ++ R NV
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 571 ---------ITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACS 621
++WN II Y M + ++ L M+ G + P++ T+ + C+
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-----ITPDKFTYATVLDTCA 614
Query: 622 HSGMVSEGMDLFYKMKDDYGIEPSPDHYAC--VVDLLGRAGKVEDA 665
+ G + ++ E D Y C +VD+ + G + D+
Sbjct: 615 NLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS 657
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 252/514 (49%), Gaps = 40/514 (7%)
Query: 159 GKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLR-VGEWNT 217
G +L +A M+ S P++F L + +N RD + LR V WN
Sbjct: 62 GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN--SRDFVSASMVFDKMPLRDVVSWNK 119
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
I Y+K + A + F RD+VSWN+++S QN + L+++ M
Sbjct: 120 MING-----YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFV-GSALVDMYCNCREVE 336
GI+ DG + A +L CS LE G +IH +R + D V SAL+DMY +
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR--VGCDTDVVAASALLDMYAKGKRFV 232
Query: 337 CGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEV-AGLWPNATTMSSVVPA 395
RVF I +K W+A+I G QN AL F +M++V AG+ + + +SV+ +
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--SQSIYASVLRS 290
Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
C +H HA+K D V+ A +DMY++ ++ ++ +FD+ E + S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 456 NTMITGYTICGQHG-DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGC 514
N MITGY+ +HG AL+L + ++ DE I+L V C
Sbjct: 351 NAMITGYSQ-EEHGFKALLLFHRLM--------SSGLGFDE---------ISLSGVFRAC 392
Query: 515 GALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWN 574
+ L++G +I+ AI++ L+ DV V +A +DMY KC L A RVFD M R+ ++WN
Sbjct: 393 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 452
Query: 575 VIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFY 634
II A+ +G+G E L L +M+ ++P+E TF ++ AC+ G + GM++
Sbjct: 453 AIIAAHEQNGKGYETLFLFVSMLR-----SRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506
Query: 635 KMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQL 668
+ G+ + ++D+ + G +E+A ++
Sbjct: 507 SIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/779 (33%), Positives = 406/779 (52%), Gaps = 105/779 (13%)
Query: 195 RRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED-------- 245
RR L+L R VHGN + G + I+N L+ +Y K ++ A+ LF +
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 246 -------------------------RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIK 280
RD V +N +++ S N+ A+ +M G K
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 281 PDGVSIASVLPACSHLEMLDTGKE---IHAYALRNDILIDNSFVGSALVDMYCNCRE--- 334
PD + ASVL + + D K+ HA AL++ S V +ALV +Y C
Sbjct: 146 PDNFTFASVLAGLALVA--DDEKQCVQFHAAALKSGAGYITS-VSNALVSVYSKCASSPS 202
Query: 335 -VECGRRVFDFISDK--------------------------------KIALWNAMITGYG 361
+ R+VFD I +K K+ +NAMI+GY
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 362 QNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDR 421
+ +EAL + +M +G+ + T SV+ AC + + +H + ++ R+
Sbjct: 263 NRGFYQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR----RED 317
Query: 422 Y---VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
+ N+L+ +Y + G+ + ++ IF+ M +D VSWN +++GY G G+A ++ +EM
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 479 Q------------NMEEEKNRNNVYDLDETVLRP--KPNSITLMTVLPGCGALSALAKGK 524
+ + E L + R +P + C L A G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
+ HA ++ + + G+AL+ MYAKCG + AR+VF MP + ++WN +I A G HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
G E +++ + M+ +G ++P+ +T + + ACSH+G+V +G F M+ Y I P
Sbjct: 498 HGAEAVDVYEEMLKKG-----IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
DHYA ++DLL R+GK DA +I +P + A W +LL CR+H N+E+G IAA
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFK-PTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
LF L P+ Y+LLSN++++ W++ VRK M++ GV+KE CSWIE ++H FL
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE-EKETLLCGHSEKLAIAFG 823
D SH ++E ++ +L++L + MR+ GYVPDTS VLH+V + KE +L HSEK+A+AFG
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731
Query: 824 ILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
++ PPGTTIR+ KNLR C DCH +F+S + R+IILRD +RFHHF+NG CSCG++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 225/494 (45%), Gaps = 92/494 (18%)
Query: 53 ARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGI-QDLSLGKQIHAHVVKYGYGLS 111
+ +N AI + +M +PDNF F +VL +A + D Q HA +K G G
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183
Query: 112 SVTVANTLVNMYGKCGSD---MWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL----- 163
+ +V+N LV++Y KC S + KVFD I EKD+ SW +M+ + G +DL
Sbjct: 184 T-SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242
Query: 164 ---------------------------ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
ALE R M+ S +E FT SV AC+
Sbjct: 243 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL- 301
Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
L+LG+QVH LR +++ N+L+++Y K G+ D+A+ +F+ +DLVSWN ++S
Sbjct: 302 --LQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 257 SLSQNDKFLEAVMFLRQMALR-------------------------------GIKPDGVS 285
+ EA + ++M + G +P +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-VGSALVDMYCNCREVECGRRVFDF 344
+ + +C+ L G++ HA L+ I D+S G+AL+ MY C VE R+VF
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 345 ISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS----- 399
+ WNA+I GQ+ + EA+ ++ +M + G+ P+ T+ +V+ AC +
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQ 536
Query: 400 --EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVS-WN 456
+ F E ++ ++ G D Y + L+D+ R G+ ++++ + + + T W
Sbjct: 537 GRKYFDSMETVY----RIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 457 TMITGYTICGQHGD 470
+++G C HG+
Sbjct: 591 ALLSG---CRVHGN 601
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/596 (22%), Positives = 247/596 (41%), Gaps = 129/596 (21%)
Query: 93 LSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMI 152
L L + +H +++ +G+ + N L+++Y K S++ ++FD I+E D+++ +M+
Sbjct: 30 LQLARAVHGNIITFGFQ-PRAHILNRLIDVYCK-SSELNYARQLFDEISEPDKIARTTMV 87
Query: 153 ATLCRFGKWDLA---------------------------------LEAFRMMLYSNVEPS 179
+ C G LA + F M + +P
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE-WNTFIMNALMAMYAKLGR----VD 234
+FT SV + ++ D + Q H +L+ G + T + NAL+++Y+K +
Sbjct: 148 NFTFASVLAGLALVA--DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKF------------------------------ 264
A+ +F ++D SW T+++ +N F
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 265 --LEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF-V 321
EA+ +R+M GI+ D + SV+ AC+ +L GK++HAY LR + D SF
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE---DFSFHF 322
Query: 322 GSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGY--------------------- 360
++LV +Y C + + R +F+ + K + WNA+++GY
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 361 ----------GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
+N + EE L LF M+ G P S + +C A+ + + H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
+K+G NAL+ MY++ G +E ++ +F M D+VSWN +I GQHG
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL---GQHGH 498
Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-IHAY 529
E ++ EE + + +P+ ITL+TVL C + +G++ +
Sbjct: 499 GA----EAVDVYEEMLKKGI----------RPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 530 AIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVI-TWNVIIMAYGMHG 584
+ + L+D+ + G + A V + +P + W ++ +HG
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW+ + A + E + + M R +P ++AF +K+ A + G+Q HA +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
+K G+ SS++ N L+ MY KCG + + +VF + D VSWN++IA L + G
Sbjct: 444 LKIGFD-SSLSAGNALITMYAKCGV-VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSN 192
A++ + ML + P TL++V ACS+
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSH 530
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/656 (37%), Positives = 374/656 (57%), Gaps = 30/656 (4%)
Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
K G +D A+ +F +R +V+WN++++ L ++ + EAV R M + PD +++S
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 289 VLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDK 348
V A S L + + H A+ + + N FVGSALVDMY + + V D + +K
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 349 KIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGI 408
+ L A+I GY Q D EA+ F M V + PN T +SV+ +C + + + I
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 409 HGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQH 468
HG +K G Q +L+ MY R ++ S +F +E + VSW ++I+G G+
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 469 GDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHA 528
AL+ R+M R+++ KPNS TL + L GC L+ +G++IH
Sbjct: 350 EMALIEFRKMM-------RDSI----------KPNSFTLSSALRGCSNLAMFEEGRQIHG 392
Query: 529 YAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQE 588
+ D GS L+D+Y KCGC + AR VFD + +VI+ N +I +Y +G G+E
Sbjct: 393 IVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 452
Query: 589 VLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDH 648
L+L + M+ G ++PN+VT +++ AC++S +V EG +LF + D I + DH
Sbjct: 453 ALDLFERMINLG-----LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDH 506
Query: 649 YACVVDLLGRAGKVEDAYQLIN-MMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFL 707
YAC+VDLLGRAG++E+A L ++ P+ W +LL AC++H+ VE+ E + +
Sbjct: 507 YACMVDLLGRAGRLEEAEMLTTEVINPDL---VLWRTLLSACKVHRKVEMAERITRKILE 563
Query: 708 LEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGD- 766
+EP +L+SN+Y+S W++ ++++ KMK+M ++K P SW+E E H F+AGD
Sbjct: 564 IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDL 623
Query: 767 GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILN 826
SH SEQ+ LE L ++ + GYV D SCV ++ E KE L HSEKLAIAF +
Sbjct: 624 FSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR 683
Query: 827 TPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
G +IR+ KNLRVC DCH K +S++ REII RD +RFHHF++G+CSCGDYW
Sbjct: 684 NVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 291/590 (49%), Gaps = 47/590 (7%)
Query: 55 SNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVT 114
+NQFR ++ D F +L+ + +S K I AH++K G+ +
Sbjct: 49 NNQFRLLCIT------CDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGF--PAEI 100
Query: 115 VANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYS 174
+ LV+ KCG D+ +VFD ++E+ V+WNS+IA L + + A+E +R+M+ +
Sbjct: 101 SGSKLVDASLKCG-DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 175 NVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG--EWNTFIMNALMAMYAKLGR 232
NV P +TL SV A S+LS + ++ HG ++ +G N F+ +AL+ MY K G+
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLE---KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 233 VDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPA 292
+AK + E++D+V ++ SQ + EAV + M + ++P+ + ASVL +
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 293 CSHLEMLDTGKEIHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFISDKKIA 351
C +L+ + GK IH +++ +++ ++L+ MY C V+ RVF I
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSG--FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
W ++I+G QN +E AL+ F KM + PN+ T+SS + C F + IHG
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
K G RD+Y + L+D+Y + G ++++ +FD + D +S NTMI Y G +A
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
L L M N L +PN +T+++VL C + +G E+
Sbjct: 454 LDLFERMIN-----------------LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496
Query: 532 RN--MLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEV 589
++ ML D + +VD+ + G L A + + +++ W ++ A +H + +
Sbjct: 497 KDKIMLTNDHY--ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
Query: 590 LELLKNMVAEGSRGGEVKP-NEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
+ + ++ E++P +E T I + + +G + +++ KMKD
Sbjct: 555 ERITRKIL-------EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKD 597
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 11/222 (4%)
Query: 510 VLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRN 569
+L C +++ K I A+ +++ ++ GS LVD KCG +++AR+VFD M R+
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 570 VITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEG 629
++TWN +I H +E +E+ + M+ V P+E T ++F A S + E
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMIT-----NNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 630 MDLFYKMKDDYGIEPSPDHY-ACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGA 688
+ + G+E S + +VD+ + GK +A +++ + E D + ++G
Sbjct: 185 QR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV-EEKDVVLITALIVGY 242
Query: 689 CRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWD 730
+ ++ E + A L+E + Y S + S L D
Sbjct: 243 SQKGEDTE--AVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/592 (39%), Positives = 350/592 (59%), Gaps = 25/592 (4%)
Query: 293 CSHLEMLDT--GKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKI 350
C+HL + + G A A+ + N + L++ Y ++ R+VFD + D+K+
Sbjct: 82 CNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL 141
Query: 351 ALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHG 410
WNAMI G Q E++EE L LF +M + G P+ T+ SV + + IHG
Sbjct: 142 TTWNAMIAGLIQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHG 200
Query: 411 HAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGD 470
+ IK GL D V ++L MY R G+++ + + M VR+ V+WNT+I G G
Sbjct: 201 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 260
Query: 471 ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYA 530
L L + M+ + +PN IT +TVL C L+ +G++IHA A
Sbjct: 261 VLYLYKMMK-----------------ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEA 303
Query: 531 IRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVL 590
I+ ++ V V S+L+ MY+KCGCL A + F + + W+ +I AYG HG+G E +
Sbjct: 304 IKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAI 363
Query: 591 ELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYA 650
EL M + + ++ NEV F+ L ACSHSG+ +G++LF M + YG +P HY
Sbjct: 364 ELFNTMAEQTN----MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYT 419
Query: 651 CVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEP 710
CVVDLLGRAG ++ A +I MP + D W +LL AC IH+N E+ + + + ++P
Sbjct: 420 CVVDLLGRAGCLDQAEAIIRSMPIKTDIV-IWKTLLSACNIHKNAEMAQRVFKEILQIDP 478
Query: 711 DVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQ 770
+ ++ YVLL+N+++SA+ W +VRK M++ V+KE G SW E E+H+F GD S
Sbjct: 479 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 538
Query: 771 QSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPG 830
+S++++ +L+ L+ M+ +GY PDT+ VLH+++EEEKE+ L HSEKLA+AF ++ P G
Sbjct: 539 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 598
Query: 831 TTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
IR+ KNLRVC+DCH A K+IS I++REI LRD RFHHF NG CSCGDYW
Sbjct: 599 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 219/507 (43%), Gaps = 74/507 (14%)
Query: 150 SMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNS 209
+ IATLC G A + FR+ +++N S FT +C+ R L G+Q+H
Sbjct: 18 TAIATLCSKGNLREAFQRFRLNIFTNT--SLFT--PFIQSCTT---RQSLPSGKQLHCLL 70
Query: 210 LRVG-EWNTFIMNALMAMYAKLG----------------------------RVDD---AK 237
+ G + FI N LM+MY+KLG R D A+
Sbjct: 71 VVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNAR 130
Query: 238 TLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLE 297
+F DR L +WN +++ L Q + E + R+M G PD ++ SV + L
Sbjct: 131 KVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLR 190
Query: 298 MLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMI 357
+ G++IH Y ++ + +D V S+L MY +++ G V + + + WN +I
Sbjct: 191 SVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 249
Query: 358 TGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGL 417
G QN E L L+ KM +++G PN T +V+ +C + IH AIK+G
Sbjct: 250 MGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308
Query: 418 GRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLRE 477
V ++L+ MYS+ G + + F + E D V W++MI+ Y GQ +A+ L
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELF-- 366
Query: 478 MQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKE-----IHAYAIR 532
M E+ N + N + + +L C KG E + Y +
Sbjct: 367 -NTMAEQTNM-------------EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 412
Query: 533 NMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGMHGEGQEVLE 591
L V VD+ + GCL+ A + MP++ +++ W ++ A +H +
Sbjct: 413 PGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 468
Query: 592 LLKNMVAEGSRGGEVKPNEVTFIALFA 618
+ K ++ ++ PN+ L A
Sbjct: 469 VFKEIL-------QIDPNDSACYVLLA 488
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 212/457 (46%), Gaps = 55/457 (12%)
Query: 58 FREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVAN 117
REA + R +I + F +++ Q L GKQ+H +V G+ S + N
Sbjct: 29 LREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFS-SDKFICN 83
Query: 118 TLVNMYGKCG------------------------------SDMWDVYKVFDRITEKDQVS 147
L++MY K G D+ + KVFD + ++ +
Sbjct: 84 HLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT 143
Query: 148 WNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLR---LGRQ 204
WN+MIA L +F + L FR M P +TL SV S GLR +G+Q
Sbjct: 144 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV------FSGSAGLRSVSIGQQ 197
Query: 205 VHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
+HG +++ G E + + ++L MY + G++ D + + +S R+LV+WNT++ +QN
Sbjct: 198 IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG- 256
Query: 264 FLEAVMFL-RQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVG 322
E V++L + M + G +P+ ++ +VL +CS L + G++IHA A++ + V
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA-VV 315
Query: 323 SALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGL 382
S+L+ MY C + + F D+ +W++MI+ YG + +EA+ LF M E +
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 375
Query: 383 WPNATTMSSVVPACVRSEAFPDK--EGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEIS 440
N +++ AC S DK E K G ++D+ R G ++ +
Sbjct: 376 EINEVAFLNLLYACSHS-GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 434
Query: 441 KTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLR 476
+ I M ++ D V W T+++ C H +A M R
Sbjct: 435 EAIIRSMPIKTDIVIWKTLLSA---CNIHKNAEMAQR 468
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 38/355 (10%)
Query: 382 LWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISK 441
++ N + + + +C ++ P + +H + G D+++ N LM MYS++G +
Sbjct: 40 IFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAV 99
Query: 442 TIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------------MEEEKNRN 488
++ M ++ +S N +I GY G +A + EM + ++ E N
Sbjct: 100 AVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEE 159
Query: 489 NVYDLDET-VLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVD 547
+ E L P+ TL +V G L +++ G++IH Y I+ L D+VV S+L
Sbjct: 160 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 219
Query: 548 MYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVK 607
MY + G L V MPVRN++ WN +IM +G + VL L K M G R
Sbjct: 220 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR----- 274
Query: 608 PNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQ 667
PN++TF+ + ++CS + +G + + G + ++ + + G + DA +
Sbjct: 275 PNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 333
Query: 668 LINMMPPEFDKAGAWSSLLGACRIH----------------QNVEIGEIAAQNLF 706
+ E + WSS++ A H N+EI E+A NL
Sbjct: 334 AFS--EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 386
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 8/252 (3%)
Query: 57 QFREAILS-YIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTV 115
+F E LS + EM PD + +V AG++ +S+G+QIH + +KYG L V V
Sbjct: 155 EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV-V 213
Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
++L +MY + G + D V + ++ V+WN++I + G + L ++MM S
Sbjct: 214 NSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 272
Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD 234
P+ T V+V +CS+L+ R G+Q+H ++++G ++++L++MY+K G +
Sbjct: 273 CRPNKITFVTVLSSCSDLAIRGQ---GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329
Query: 235 DAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR-GIKPDGVSIASVLPAC 293
DA F ED D V W++++S+ + + EA+ MA + ++ + V+ ++L AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389
Query: 294 SHLEMLDTGKEI 305
SH + D G E+
Sbjct: 390 SHSGLKDKGLEL 401
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/718 (34%), Positives = 380/718 (52%), Gaps = 70/718 (9%)
Query: 206 HGNSLRVGEWNTFIMNA-LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKF 264
H N+ ++ + FI+ L + +A L R D K + ED +V V L + ++F
Sbjct: 3 HSNARKLTTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVV-----VERLCRANRF 57
Query: 265 LEAV------MFLR---QMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
EA+ LR Q+ R KP + +++ CS L+ GK++H + +R
Sbjct: 58 GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH-IRTSGF 116
Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN--------------------- 354
+ + + L+ MY C + R+VFD + ++ + WN
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 355 ----------AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD 404
AM+TGY + + EEAL+L+ M+ V PN T+S V A +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 405 KEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
+ IHGH ++ GL D + ++LMDMY + G I+ ++ IFD + +D VSW +MI Y
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
+ + L E+ E +PN T VL C L+ GK
Sbjct: 297 SSRWREGFSLFSELVGSCE-----------------RPNEYTFAGVLNACADLTTEELGK 339
Query: 525 EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHG 584
++H Y R S+LVDMY KCG + A+ V D P ++++W +I +G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 585 EGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEP 644
+ E L+ ++ G+ KP+ VTF+ + +AC+H+G+V +G++ FY + + + +
Sbjct: 400 QPDEALKYFDLLLKSGT-----KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 645 SPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQN 704
+ DHY C+VDLL R+G+ E +I+ MP + K W+S+LG C + N+++ E AAQ
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF-LWASVLGGCSTYGNIDLAEEAAQE 513
Query: 705 LFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLA 764
LF +EP+ YV ++NIY++A W++ +RK+M+E+GV K PG SW E + H F+A
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIA 573
Query: 765 GDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGI 824
D SH Q+ FL L ++M++EGYVP TS VLH+V +E+KE L HSEKLA+AF I
Sbjct: 574 ADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAI 633
Query: 825 LNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
L+T GT I+V KNLR C DCH A KFIS I R+I +RD RFH F+NG CSCGDYW
Sbjct: 634 LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 224/482 (46%), Gaps = 65/482 (13%)
Query: 54 RSNQFREAI--LSYIEMTRSDIQ-------PDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
R+N+F EAI L ++ R +Q P + +++ + + L GK++H H+
Sbjct: 53 RANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
G+ + + + N L+ MY KCGS + D KVFD + +D SWN M+ G + A
Sbjct: 113 TSGF-VPGIVIWNRLLRMYAKCGS-LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170
Query: 165 LEAFRMM--------------------------LYS------NVEPSSFTLVSVALACSN 192
+ F M LYS N P+ FT V++A +
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT---VSIAVAA 227
Query: 193 LSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSW 251
+ +R G+++HG+ +R G + + + ++LM MY K G +D+A+ +F ++D+VSW
Sbjct: 228 AAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSW 287
Query: 252 NTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALR 311
+++ ++ ++ E ++ +P+ + A VL AC+ L + GK++H Y R
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347
Query: 312 NDILIDN-SFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
+ D SF S+LVDMY C +E + V D + W ++I G QN +EAL
Sbjct: 348 --VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRS-------EAFPDKEGIHGHAIKLGLGRDRYV 423
F + + +G P+ T +V+ AC + E F H +L D Y
Sbjct: 406 KYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH----RLSHTSDHYT 460
Query: 424 QNALMDMYSRMGRIEISKTIFDDMEVRDT-VSWNTMITGYTICGQHGDALMLLREMQNME 482
L+D+ +R GR E K++ +M ++ + W +++ G + G A +E+ +E
Sbjct: 461 --CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 483 EE 484
E
Sbjct: 519 PE 520
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 170/340 (50%), Gaps = 11/340 (3%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTR-SDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
SW + + +Q EA++ Y M R + +P+ F + A A ++ + GK+IH H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 103 VVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWD 162
+V+ G V + ++L++MYGKCG + + +FD+I EKD VSW SMI + +W
Sbjct: 244 IVRAGLDSDEV-LWSSLMDMYGKCGC-IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 163 LALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMN 221
F ++ S P+ +T V AC++L+ + LG+QVHG RVG + +F +
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE---LGKQVHGYMTRVGFDPYSFASS 358
Query: 222 ALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKP 281
+L+ MY K G ++ AK + DLVSW +++ +QN + EA+ + + G KP
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP 418
Query: 282 DGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRV 341
D V+ +VL AC+H +++ G E L S + LVD+ E + V
Sbjct: 419 DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSV 478
Query: 342 FDFISDKKIA-LWNAMITG---YGQNEYDEEALMLFIKME 377
+ K LW +++ G YG + EEA K+E
Sbjct: 479 ISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 268/785 (34%), Positives = 399/785 (50%), Gaps = 117/785 (14%)
Query: 116 ANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSN 175
AN + + G + + K+FD K SWNSM+A ++N
Sbjct: 20 ANVRITHLSRIGK-IHEARKLFDSCDSKSISSWNSMVAGY-----------------FAN 61
Query: 176 VEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDD 235
+ P RD +L ++ N N L++ Y K G +D+
Sbjct: 62 LMP-----------------RDARKLFDEMPDR-------NIISWNGLVSGYMKNGEIDE 97
Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSH 295
A+ +F +R++VSW +V N K A +M + + VS +L
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVML----- 148
Query: 296 LEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNA 355
+ L G+ A L I ++ ++++ C V+ R +FD +S++ + W
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 356 MITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKL 415
M+TGYGQN ++A +F + P+K + ++ +
Sbjct: 209 MVTGYGQNNRVDDARKIF--------------------------DVMPEKTEVSWTSMLM 242
Query: 416 GLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLL 475
G YVQN GRIE ++ +F+ M V+ ++ N MI+G GQ G+
Sbjct: 243 G-----YVQN---------GRIEDAEELFEVMPVKPVIACNAMISGL---GQKGEIAKAR 285
Query: 476 REMQNMEE-------------EKNRNNVYDLDETVLRPK----PNSITLMTVLPGCGALS 518
R +M+E E+N + LD +L K P TL+++L C +L+
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 519 ALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIM 578
+L GK++HA +R DV V S L+ MY KCG L ++ +FD P +++I WN II
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405
Query: 579 AYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKD 638
Y HG G+E L++ M GS KPNEVTF+A +ACS++GMV EG+ ++ M+
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGS----TKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 639 DYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIG 698
+G++P HYAC+VD+LGRAG+ +A ++I+ M E D A W SLLGACR H +++
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD-AAVWGSLLGACRTHSQLDVA 520
Query: 699 EIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDE 758
E A+ L +EP+ + Y+LLSN+Y+S W ++RK MK VRK PGCSW E ++
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Query: 759 IHKFLAGD-GSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEK 817
+H F G SH + E + L+ L +R+ GY PD S LH+V+EEEK L HSE+
Sbjct: 581 VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSER 640
Query: 818 LAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCS 877
LA+A+ +L G IRV KNLRVC+DCH A K ISK++ REIILRD RFHHF+NG CS
Sbjct: 641 LAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECS 700
Query: 878 CGDYW 882
C DYW
Sbjct: 701 CKDYW 705
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 49/379 (12%)
Query: 112 SVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMM 171
SV T+V YG+ + + D K+FD + EK +VSW SM+ + G+ + A E F +M
Sbjct: 202 SVITWTTMVTGYGQ-NNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 172 LYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLG 231
V+P +AC NA+++ + G
Sbjct: 261 ---PVKP--------VIAC------------------------------NAMISGLGQKG 279
Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
+ A+ +F S ++R+ SW T++ +N LEA+ M +G++P ++ S+L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
C+ L L GK++HA +R +D +V S L+ MY C E+ + +FD K I
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGH 411
+WN++I+GY + EEAL +F +M PN T + + AC S A +EG+ +
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC--SYAGMVEEGLKIY 456
Query: 412 AIK---LGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQ 467
G+ ++DM R GR + + D M V D W +++ Q
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Query: 468 HGDALMLLREMQNMEEEKN 486
A +++ +E E +
Sbjct: 517 LDVAEFCAKKLIEIEPENS 535
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 6/199 (3%)
Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
+ V N +++ G+ G ++ +VFD + E++ SW ++I R G AL+ F
Sbjct: 262 VKPVIACNAMISGLGQKG-EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYA 228
+M V P+ TL+S+ C++L+ L G+QVH +R + + ++ + LM MY
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLA---SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG-IKPDGVSIA 287
K G + +K +F F +D++ WN+I+S + + EA+ +M L G KP+ V+
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 288 SVLPACSHLEMLDTGKEIH 306
+ L ACS+ M++ G +I+
Sbjct: 438 ATLSACSYAGMVEEGLKIY 456
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 38 QTRCKESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGK 97
+ R SW ++ R+ EA+ +I M + ++P ++L A + L GK
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 98 QIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCR 157
Q+HA +V+ + + V VA+ L+ MY KCG ++ +FDR KD + WNS+I+
Sbjct: 352 QVHAQLVRCQFDV-DVYVASVLMTMYIKCG-ELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 158 FGKWDLALEAF-RMMLYSNVEPSSFTLVSVALACSNLSR-RDGLRLGRQVHGNSLRVGEW 215
G + AL+ F M L + +P+ T V+ ACS +GL++ +
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME--------- 460
Query: 216 NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
+ F + + A YA +V L + +F EA+ + M
Sbjct: 461 SVFGVKPITAHYA------------------------CMVDMLGRAGRFNEAMEMIDSMT 496
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGK 303
++PD S+L AC LD +
Sbjct: 497 ---VEPDAAVWGSLLGACRTHSQLDVAE 521
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/706 (35%), Positives = 381/706 (53%), Gaps = 62/706 (8%)
Query: 211 RVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMF 270
R+ + N F N L+ Y+K G + + ++ F+ DRD V+WN ++ S + AV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 271 LRQMALRGIKPD--GVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSF--VGSALV 326
M +R + V++ ++L S + GK+IH ++ L S+ VGS L+
Sbjct: 126 YNTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK---LGFESYLLVGSPLL 181
Query: 327 DMYCNCREVECGRRVFDFISDKKIAL------------------------------WNAM 356
MY N + ++VF + D+ + W AM
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAM 241
Query: 357 ITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLG 416
I G QN +EA+ F +M+ V GL + SV+PAC A + + IH I+
Sbjct: 242 IKGLAQNGLAKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 417 LGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLR 476
YV +AL+DMY + + +KT+FD M+ ++ VSW M+ GY G+ +A+ +
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 477 EMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLA 536
+MQ R+ + P+ TL + C +S+L +G + H AI + L
Sbjct: 361 DMQ-------RSGI----------DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403
Query: 537 TDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNM 596
V V ++LV +Y KCG ++ + R+F+ M VR+ ++W ++ AY G E ++L M
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Query: 597 VAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLL 656
V G +KP+ VT + +ACS +G+V +G F M +YGI PS HY+C++DL
Sbjct: 464 VQHG-----LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 657 GRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHY 716
R+G++E+A + IN MP D G W++LL ACR N+EIG+ AA++L L+P + Y
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIG-WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 717 VLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLH 776
LLS+IY+S WD +R+ M+E V+KEPG SWI++ ++H F A D S +Q++
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 777 GFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVA 836
LE L+ ++ GY PDTS V H+V E K +L HSE+LAIAFG++ P G IRV
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVG 697
Query: 837 KNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
KNLRVC DCH ATK IS + REI++RD RFH FK+GTCSCGD+W
Sbjct: 698 KNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 193/434 (44%), Gaps = 61/434 (14%)
Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
K IH +R + +F+ + +V Y + RRVFD I + WN ++ Y +
Sbjct: 26 KMIHGNIIRA-LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 363 NEYDEEALMLFIKMEEVAGLWPN----ATTMSSVVPACVRSE------------------ 400
E F K+ + G+ N ++S +V A V++
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 401 --AFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRD 451
G IHG IKLG V + L+ MY+ +G I +K +F ++ R+
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 452 TVSWNTMITGYTICGQHGDALMLLREMQN-------MEEEKNRNNVYDLDETVLRP---- 500
TV +N+++ G CG DAL L R M+ M + +N + R
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 501 --KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFA 558
K + +VLP CG L A+ +GK+IHA IR + VGSAL+DMY KC CL++A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 559 RRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFA 618
+ VFD M +NV++W +++ YG G +E +++ +M G + P+ T +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-----IDPDHYTLGQAIS 379
Query: 619 ACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACV----VDLLGRAGKVEDAYQLINMMPP 674
AC++ + EG K I HY V V L G+ G ++D+ +L N M
Sbjct: 380 ACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-- 432
Query: 675 EFDKAGAWSSLLGA 688
A +W++++ A
Sbjct: 433 NVRDAVSWTAMVSA 446
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 194/415 (46%), Gaps = 48/415 (11%)
Query: 83 VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVF----D 138
+LK + +SLGKQIH V+K G+ S + V + L+ MY G + D KVF D
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVGSPLLYMYANVGC-ISDAKKVFYGLDD 202
Query: 139 RIT--------------------------EKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
R T EKD VSW +MI L + G A+E FR M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLG 231
++ + SV AC L + G+Q+H +R + + ++ +AL+ MY K
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLG---AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 232 RVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLP 291
+ AKT+F + +++VSW +V Q + EAV M GI PD ++ +
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 292 ACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIA 351
AC+++ L+ G + H A+ + LI V ++LV +Y C +++ R+F+ ++ +
Sbjct: 380 ACANVSSLEEGSQFHGKAITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 352 LWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPD-----KE 406
W AM++ Y Q E + LF KM + GL P+ T++ V+ AC R+ K
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 407 GIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWNTMIT 460
+ I +G + ++D++SR GR+E + + M D + W T+++
Sbjct: 498 MTSEYGIVPSIGH----YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 144/262 (54%), Gaps = 6/262 (2%)
Query: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103
SW ++ A++ +EAI + EM ++ D + F +VL A G+ ++ GKQIHA +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 104 VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163
++ + + V + L++MY KC + VFDR+ +K+ VSW +M+ + G+ +
Sbjct: 297 IRTNFQ-DHIYVGSALIDMYCKCKCLHY-AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 164 ALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN-TFIMNA 222
A++ F M S ++P +TL AC+N+S L G Q HG ++ G + + N+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVS---SLEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 223 LMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPD 282
L+ +Y K G +DD+ LF RD VSW +VS+ +Q + +E + +M G+KPD
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Query: 283 GVSIASVLPACSHLEMLDTGKE 304
GV++ V+ ACS +++ G+
Sbjct: 472 GVTLTGVISACSRAGLVEKGQR 493
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 513 GCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVIT 572
G GA + K IH IR + + + + +V YA +ARRVFD +P N+ +
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFS 74
Query: 573 WNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNE--VTFIALFAACSHSGMVSEGM 630
WN +++AY G +++E E P+ VT+ L S SG+V +
Sbjct: 75 WNNLLLAYSKAG-----------LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 631 DLFYKMKDDY 640
+ M D+
Sbjct: 124 KAYNTMMRDF 133
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/608 (38%), Positives = 351/608 (57%), Gaps = 32/608 (5%)
Query: 280 KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC-- 337
K D V+ + + S L +I AYA+++ I D SFV + +C E
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLI--NFCTESPTESSM 79
Query: 338 --GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
R +F+ +S+ I ++N+M GY + E LF+++ E G+ P+ T S++ A
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKA 138
Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
C ++A + +H ++KLGL + YV L++MY+ ++ ++ +FD + V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
N MITGY + +AL L REMQ KPN ITL++VL C
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGK-----------------YLKPNEITLLSVLSSCA 241
Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
L +L GK IH YA ++ V V +AL+DM+AKCG L+ A +F+ M ++ W+
Sbjct: 242 LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSA 301
Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
+I+AY HG+ ++ + + + M R V+P+E+TF+ L ACSH+G V EG F +
Sbjct: 302 MIVAYANHGKAEKSMLMFERM-----RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 356
Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
M +GI PS HY +VDLL RAG +EDAY+ I+ +P W LL AC H N+
Sbjct: 357 MVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS-PTPMLWRILLAACSSHNNL 415
Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
++ E ++ +F L+ YV+LSN+Y+ + W+ +RK MK+ K PGCS IE
Sbjct: 416 DLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEV 475
Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLH-NVNEEEKETLLCGH 814
+ +H+F +GDG + +LH L+ + + ++ GYVPDTS V+H N+N++EKE L H
Sbjct: 476 NNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYH 535
Query: 815 SEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNG 874
SEKLAI FG+LNTPPGTTIRV KNLRVC DCH A K IS I R+++LRDV+RFHHF++G
Sbjct: 536 SEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDG 595
Query: 875 TCSCGDYW 882
CSCGD+W
Sbjct: 596 KCSCGDFW 603
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 137/256 (53%), Gaps = 6/256 (2%)
Query: 50 RSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYG 109
R +R E ++E+ I PDN+ FP++LKA A + L G+Q+H +K G
Sbjct: 102 RGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD 161
Query: 110 LSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFR 169
+V V TL+NMY +C D+ VFDRI E V +N+MI R + + AL FR
Sbjct: 162 -DNVYVCPTLINMYTEC-EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 170 MMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMN-ALMAMYA 228
M ++P+ TL+SV +C+ L D LG+ +H + + +N AL+ M+A
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLD---LGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 229 KLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIAS 288
K G +DDA ++F+ +D +W+ ++ + + + K ++++ +M ++PD ++
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 289 VLPACSHLEMLDTGKE 304
+L ACSH ++ G++
Sbjct: 337 LLNACSHTGRVEEGRK 352
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 189/404 (46%), Gaps = 24/404 (5%)
Query: 98 QIHAHVVKYGYGLSSVTVANTLVNMYGKCG--SDMWDVYKVFDRITEKDQVSWNSMIATL 155
QI A+ +K + V+ L+N + S M +F+ ++E D V +NSM
Sbjct: 47 QIQAYAIKSH--IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGY 104
Query: 156 CRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-E 214
RF F +L + P ++T S+ AC+ L GRQ+H S+++G +
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA---VAKALEEGRQLHCLSMKLGLD 161
Query: 215 WNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQM 274
N ++ L+ MY + VD A+ +F + +V +N +++ ++ ++ EA+ R+M
Sbjct: 162 DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221
Query: 275 ALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCRE 334
+ +KP+ +++ SVL +C+ L LD GK IH YA ++ V +AL+DM+ C
Sbjct: 222 QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGS 280
Query: 335 VECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVP 394
++ +F+ + K W+AMI Y + E+++++F +M + P+ T ++
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENVQPDEITFLGLLN 339
Query: 395 ACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDT- 452
AC + + + K G+ +++D+ SR G +E + D + + T
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 453 VSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDET 496
+ W ++ C H + + EK +++LD++
Sbjct: 400 MLWRILLAA---CSSHNNLDL---------AEKVSERIFELDDS 431
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 43 ESWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAH 102
++W + + A + +++L + M ++QPD F +L A + + G++ +
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 356
Query: 103 VV-KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRI-TEKDQVSWNSMIATLCRFGK 160
+V K+G + S+ ++V++ + G ++ D Y+ D++ + W ++A
Sbjct: 357 MVSKFGI-VPSIKHYGSMVDLLSRAG-NLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 161 WDLA 164
DLA
Sbjct: 415 LDLA 418
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/666 (36%), Positives = 363/666 (54%), Gaps = 72/666 (10%)
Query: 218 FIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR 277
F +N ++A + G +D A +F ++ ++WN+++ +S+
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK----------------- 104
Query: 278 GIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC 337
D + + A+ L ++I ++F + ++ Y E
Sbjct: 105 ----------------------DPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 338 GRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACV 397
+ FD + K A WN MITGY + E+A LF M E N + ++++ +
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME-----KNEVSWNAMISGYI 197
Query: 398 RSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEV-RDTVSWN 456
H K+ R A++ Y + ++E+++ +F DM V ++ V+WN
Sbjct: 198 ECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 457 TMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGA 516
MI+GY + D L L R M L+E + +PNS L + L GC
Sbjct: 254 AMISGYVENSRPEDGLKLFRAM--------------LEEGI---RPNSSGLSSALLGCSE 296
Query: 517 LSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVI 576
LSAL G++IH ++ L DV ++L+ MY KCG L A ++F++M ++V+ WN +
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM 356
Query: 577 IMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM 636
I Y HG + L L + M+ +++P+ +TF+A+ AC+H+G+V+ GM F M
Sbjct: 357 ISGYAQHGNADKALCLFREMI-----DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 637 KDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVE 696
DY +EP PDHY C+VDLLGRAGK+E+A +LI MP A + +LLGACR+H+NVE
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR-PHAAVFGTLLGACRVHKNVE 470
Query: 697 IGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFG 756
+ E AA+ L L A+ YV L+NIY+S W+ VRK+MKE V K PG SWIE
Sbjct: 471 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIR 530
Query: 757 DEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSE 816
+++H F + D H + + +H L+ L ++M+ GY P+ LHNV EE+KE LL HSE
Sbjct: 531 NKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSE 590
Query: 817 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTC 876
KLA+AFG + P G+ I+V KNLR+C DCH+A KFIS+IE REII+RD RFHHFK+G+C
Sbjct: 591 KLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSC 650
Query: 877 SCGDYW 882
SCGDYW
Sbjct: 651 SCGDYW 656
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 36/327 (11%)
Query: 137 FDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRR 196
FDR+ KD SWN+MI R G+ + A E F M+ N E S ++S + C +L +
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN-EVSWNAMISGYIECGDLEKA 205
Query: 197 DGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFE-DRDLVSWNTIV 255
V G V W A++ Y K +V+ A+ +FK +++LV+WN ++
Sbjct: 206 SHFFKVAPVRG----VVAWT-----AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
Query: 256 SSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDIL 315
S +N + + + R M GI+P+ ++S L CS L L G++IH ++ +
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316
Query: 316 IDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIK 375
D + + S L+ MYC C E+ ++F+ + K + WNAMI+GY Q+ ++AL LF +
Sbjct: 317 NDVTALTS-LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 376 MEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG------RDRYVQ----- 424
M + + P+ T +V+ AC H + +G+ RD V+
Sbjct: 376 MID-NKIRPDWITFVAVLLACN-----------HAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 425 -NALMDMYSRMGRIEISKTIFDDMEVR 450
++D+ R G++E + + M R
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 192/431 (44%), Gaps = 39/431 (9%)
Query: 141 TEKDQV-SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGL 199
+++DQ+ N +IA R G D AL F M N + L+ ++ +D
Sbjct: 56 SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGIS--------KDPS 107
Query: 200 RLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLS 259
R+ + H + E +TF N +++ Y + + A++ F +D SWNT+++ +
Sbjct: 108 RM-MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 260 QNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNS 319
+ + +A R++ ++ + VS +++ ++E D K H + + +
Sbjct: 167 RRGEMEKA----RELFYSMMEKNEVSWNAMISG--YIECGDLEKASHFFKVAP---VRGV 217
Query: 320 FVGSALVDMYCNCREVECGRRVF-DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEE 378
+A++ Y ++VE +F D +K + WNAMI+GY +N E+ L LF M E
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE 438
G+ PN++ +SS + C A IH K L D +L+ MY + G +
Sbjct: 278 -EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 439 ISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVL 498
+ +F+ M+ +D V+WN MI+GY G AL L REM +D +
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM--------------IDNKI- 381
Query: 499 RPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNF 557
+P+ IT + VL C + G +R+ + + +VD+ + G L
Sbjct: 382 --RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 558 ARRVFDLMPVR 568
A ++ MP R
Sbjct: 440 ALKLIRSMPFR 450
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
++E+ R E FR M I+P++ + L + + L LG+QIH +V
Sbjct: 259 YVENSRPEDGLKLFRA-------MLEEGIRPNSSGLSSALLGCSELSALQLGRQIH-QIV 310
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
+ VT +L++MY KCG ++ D +K+F+ + +KD V+WN+MI+ + G D A
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCG-ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN 192
L FR M+ + + P T V+V LAC++
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNH 397
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/582 (39%), Positives = 347/582 (59%), Gaps = 27/582 (4%)
Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQ 362
K+IHA LR NS + + L++ ++ R+VFD + +I LWN + GY +
Sbjct: 28 KKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 363 NEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRY 422
N+ E+L+L+ KM ++ G+ P+ T VV A + F +H H +K G G
Sbjct: 87 NQLPFESLLLYKKMRDL-GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 423 VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNME 482
V L+ MY + G + ++ +F+ M+V+D V+WN + +C Q G++ + L M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA---VCVQTGNSAIALEYFNKMC 202
Query: 483 EEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVG 542
+ + +S T++++L CG L +L G+EI+ A + + +++V
Sbjct: 203 ADA--------------VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 543 SALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSR 602
+A +DM+ KCG AR +F+ M RNV++W+ +I+ Y M+G+ +E L L M EG R
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 603 GGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKM--KDDYGIEPSPDHYACVVDLLGRAG 660
PN VTF+ + +ACSH+G+V+EG F M +D +EP +HYAC+VDLLGR+G
Sbjct: 309 -----PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 661 KVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLS 720
+E+AY+ I MP E D G W +LLGAC +H+++ +G+ A L PD+ S++VLLS
Sbjct: 364 LLEEAYEFIKKMPVEPD-TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLS 422
Query: 721 NIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLE 780
NIY++A WD VR KM+++G +K S +EF +IH F GD SH QS+ ++ L+
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 781 NLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 840
+ +++RK GYVPDT V H+V EEKE L HSEKLAIAFG++ PG IRV KNLR
Sbjct: 483 EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542
Query: 841 VCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
C+DCH +KF+S + S EII+RD RFHHF+NG CSC ++W
Sbjct: 543 TCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 6/270 (2%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W + R+ E++L Y +M ++PD F +P V+KA++ + D S G +HAHVV
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
KYG+G + VA LV MY K G ++ +F+ + KD V+WN+ +A + G +A
Sbjct: 137 KYGFGCLGI-VATELVMMYMKFG-ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNAL 223
LE F M V+ SFT+VS+ AC L L +G +++ + + + N + NA
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLG---SLEIGEEIYDRARKEEIDCNIIVENAR 251
Query: 224 MAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDG 283
+ M+ K G + A+ LF+ + R++VSW+T++ + N EA+ M G++P+
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311
Query: 284 VSIASVLPACSHLEMLDTGKEIHAYALRND 313
V+ VL ACSH +++ GK + ++++
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)
Query: 97 KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156
K+IHA V++ G+ + + L N+ DM +VFD + + WN++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLV--VIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 157 RFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWN 216
R +L ++ M V P FT V A S L G +H + ++ G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG---DFSCGFALHAHVVKYGFGC 142
Query: 217 TFIM-NALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMA 275
I+ L+ MY K G + A+ LF+S + +DLV+WN ++ Q A+ + +M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 276 LRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREV 335
++ D ++ S+L AC L L+ G+EI+ A + +I N V +A +DM+ C
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC-NIIVENARLDMHLKCGNT 261
Query: 336 ECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
E R +F+ + + + W+ MI GY N EAL LF M+ GL PN T V+ A
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN-EGLRPNYVTFLGVLSA 320
Query: 396 CVRSEAFPDKEG-------IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDME 448
C S A EG + + L ++ Y ++D+ R G +E + M
Sbjct: 321 C--SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMP 376
Query: 449 VR-DTVSWNTMITGYTICGQHGDALM 473
V DT W ++ C H D ++
Sbjct: 377 VEPDTGIWGALLGA---CAVHRDMIL 399
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/752 (33%), Positives = 417/752 (55%), Gaps = 40/752 (5%)
Query: 44 SWIESLRSEARSNQFREAILSYIEM--TRSDIQPDNFAFPAVLKAVAGIQDLS--LGKQI 99
SW + + + E+++ ++E TR D P+ + + ++A +G+ + Q+
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKD-SPNEYILSSFIQACSGLDGRGRWMVFQL 170
Query: 100 HAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFG 159
+ +VK G+ V V L++ Y K G+ + VFD + EK V+W +MI+ + G
Sbjct: 171 QSFLVKSGFD-RDVYVGTLLIDFYLKDGNIDY-ARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 160 KWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTF 218
+ ++L+ F ++ NV P + L +V ACS L +G G+Q+H + LR G E +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG---GKQIHAHILRYGLEMDAS 285
Query: 219 IMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRG 278
+MN L+ Y K GRV A LF +++++SW T++S QN EA+ M+ G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 279 IKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECG 338
+KPD + +S+L +C+ L L G ++HAY ++ + L ++S+V ++L+DMY C +
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 339 RRVFDFISDKKIALWNAMITGY---GQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPA 395
R+VFD + + L+NAMI GY G EAL +F M + P+ T S++ A
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRA 463
Query: 396 CVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSW 455
+ + IHG K GL D + +AL+D+YS ++ S+ +FD+M+V+D V W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 456 NTMITGYTICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCG 515
N+M GY ++ +AL L E+Q + R +P+ T ++ G
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQ-----------------LSRERPDEFTFANMVTAAG 566
Query: 516 ALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNV 575
L+++ G+E H ++ L + + +AL+DMYAKCG A + FD R+V+ WN
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 576 IIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYK 635
+I +Y HGEG++ L++L+ M++EG ++PN +TF+ + +ACSH+G+V +G+ F
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEG-----IEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 636 MKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNV 695
M +GIEP +HY C+V LLGRAG++ A +LI MP + A W SLL C NV
Sbjct: 682 MLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK-PAAIVWRSLLSGCAKAGNV 739
Query: 696 EIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEF 755
E+ E AA+ L +P + + +LSNIY+S +W +A VR++MK GV KEPG SWI
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGI 799
Query: 756 GDEIHKFLAGDGSHQQSEQLHGFLENLSERMR 787
E+H FL+ D SH ++ Q++ L++L ++R
Sbjct: 800 NKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/623 (27%), Positives = 309/623 (49%), Gaps = 45/623 (7%)
Query: 80 FPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDR 139
F +L+ A L +H ++ +G L + ++N L+N+Y + G ++ KVF++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTY-LSNILINLYSRAGGMVY-ARKVFEK 104
Query: 140 ITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE-PSSFTLVSVALACSNLSRRDG 198
+ E++ VSW++M++ G ++ +L F + + P+ + L S ACS L R G
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR-G 163
Query: 199 LRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSS 257
+ Q+ ++ G + + ++ L+ Y K G +D A+ +F + ++ V+W T++S
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 258 LSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILID 317
+ + ++ Q+ + PDG +++VL ACS L L+ GK+IHA+ LR + +D
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 318 NSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKME 377
S + + L+D Y C V ++F+ + +K I W +++GY QN +EA+ LF M
Sbjct: 284 ASLM-NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 378 EVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRI 437
+ GL P+ SS++ +C A +H + IK LG D YV N+L+DMY++ +
Sbjct: 343 KF-GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 438 EISKTIFDDMEVRDTVSWNTMITGYTICGQH---GDALMLLREMQNMEEEKNRNNVYDLD 494
++ +FD D V +N MI GY+ G +AL + R+M+
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR--------------- 446
Query: 495 ETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGC 554
+P+ +T +++L +L++L K+IH + L D+ GSAL+D+Y+ C C
Sbjct: 447 --FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 555 LNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFI 614
L +R VFD M V++++ WN + Y E +E L L + R P+E TF
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER-----PDEFTFA 559
Query: 615 ALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPP 674
+ A + V G + F+ G+E +P ++D+ + G EDA++
Sbjct: 560 NMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK------- 611
Query: 675 EFDKAGA-----WSSLLGACRIH 692
FD A + W+S++ + H
Sbjct: 612 AFDSAASRDVVCWNSVISSYANH 634
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 258/524 (49%), Gaps = 50/524 (9%)
Query: 197 DGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIV 255
D L VHG + G E +T++ N L+ +Y++ G + A+ +F+ +R+LVSW+T+V
Sbjct: 58 DLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV 117
Query: 256 SSLSQNDKFLEA-VMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGK----EIHAYAL 310
S+ + + + E+ V+FL R P+ ++S + ACS L+ G+ ++ ++ +
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLV 175
Query: 311 RNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEAL 370
++ D +VG+ L+D Y ++ R VFD + +K W MI+G + +L
Sbjct: 176 KSGFDRD-VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 371 MLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDM 430
LF ++ E + P+ +S+V+ AC + IH H ++ GL D + N L+D
Sbjct: 235 QLFYQLME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 431 YSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQNMEEEKNRNNV 490
Y + GR+ + +F+ M ++ +SW T+++GY H +A+ L M
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK---------- 343
Query: 491 YDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATDVVVGSALVDMYA 550
KP+ ++L C +L AL G ++HAY I+ L D V ++L+DMYA
Sbjct: 344 -------FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 551 KCGCLNFARRVFDLMPVRNVITWNVIIMAY---GMHGEGQEVLELLKNMVAEGSRGGEVK 607
KC CL AR+VFD+ +V+ +N +I Y G E E L + ++M R ++
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-----RFRLIR 451
Query: 608 PNEVTFIALF---AACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVED 664
P+ +TF++L A+ + G+ + L +K YG+ + ++D+ ++D
Sbjct: 452 PSLLTFVSLLRASASLTSLGLSKQIHGLMFK----YGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 665 AYQLINMMPPEFDKAGAWSSLL-GACRIHQNVEIGEIAAQNLFL 707
+ + + M + W+S+ G + +N E A NLFL
Sbjct: 508 SRLVFDEM--KVKDLVIWNSMFAGYVQQSENEE-----ALNLFL 544
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 38/314 (12%)
Query: 408 IHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQ 467
+HG I GL D Y+ N L+++YSR G + ++ +F+ M R+ VSW+TM++ C
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA---CNH 122
Query: 468 HG---DALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
HG ++L++ E ++ PN L + + C L +
Sbjct: 123 HGIYEESLVVFLEFWRTRKD----------------SPNEYILSSFIQACSGLDGRGRWM 166
Query: 525 --EIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGM 582
++ ++ +++ DV VG+ L+D Y K G +++AR VFD +P ++ +TW +I
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 583 HGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGI 642
G L+L ++ + V P+ + +ACS + EG + YG+
Sbjct: 227 MGRSYVSLQLFYQLMED-----NVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGL 280
Query: 643 EPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE--- 699
E ++D + G+V A++L N MP + +W++LL + QN E
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYK--QNALHKEAME 336
Query: 700 -IAAQNLFLLEPDV 712
+ + F L+PD+
Sbjct: 337 LFTSMSKFGLKPDM 350
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/654 (35%), Positives = 364/654 (55%), Gaps = 28/654 (4%)
Query: 249 VSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAY 308
+ +N + LS++ + ++F +++ G + D S +L A S + L G E+H
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 309 ALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEE 368
A + L D FV + +DMY +C + R VFD +S + + WN MI Y + +E
Sbjct: 137 AFKIATLCD-PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 369 ALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALM 428
A LF +M++ + + P+ + ++V AC R+ I+ I+ + D ++ AL+
Sbjct: 196 AFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 429 DMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREMQN-------- 480
MY+ G +++++ F M VR+ M++GY+ CG+ DA ++ + +
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 481 -----MEEEKNRNNVYDLDETVLRP-KPNSITLMTVLPGCGALSALAKGKEIHAYAIRNM 534
+E + + + +E KP+ +++ +V+ C L L K K +H+ N
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 535 LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLK 594
L +++ + +AL++MYAKCG L+ R VF+ MP RNV++W+ +I A MHGE + L L
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 595 NMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVD 654
M E V+PNEVTF+ + CSHSG+V EG +F M D+Y I P +HY C+VD
Sbjct: 435 RMKQEN-----VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489
Query: 655 LLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVAS 714
L GRA + +A ++I MP W SL+ ACRIH +E+G+ AA+ + LEPD
Sbjct: 490 LFGRANLLREALEVIESMPVA-SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548
Query: 715 HYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQ 774
VL+SNIY+ Q W+ ++R+ M+E V KE G S I+ + H+FL GD H+QS +
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE 608
Query: 775 LHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGT--- 831
++ L+ + +++ GYVPD VL +V EEEK+ L+ HSEKLA+ FG++N
Sbjct: 609 IYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKD 668
Query: 832 ---TIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
IR+ KNLRVC DCH K +SK+ REII+RD RFH +KNG CSC DYW
Sbjct: 669 SCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 44/456 (9%)
Query: 49 LRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGY 108
LR +RS++ R IL Y + + D F+F +LKAV+ + L G ++H K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIA- 141
Query: 109 GLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAF 168
L V ++MY CG + VFD ++ +D V+WN+MI CRFG D A + F
Sbjct: 142 TLCDPFVETGFMDMYASCGRINY-ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 169 RMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH----GNSLRVGEW--------- 215
M SNV P L ++ AC R +R R ++ N +R+
Sbjct: 201 EEMKDSNVMPDEMILCNIVSAC---GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 216 -------------------NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVS 256
N F+ A+++ Y+K GR+DDA+ +F E +DLV W T++S
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 257 SLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILI 316
+ ++D EA+ +M GIKPD VS+ SV+ AC++L +LD K +H+ N +
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES 377
Query: 317 DNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM 376
+ S + +AL++MY C ++ R VF+ + + + W++MI + +AL LF +M
Sbjct: 378 ELS-INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 377 EEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAI-KLGLGRDRYVQNALMDMYSRMG 435
++ + PN T V+ C S + + I + + ++D++ R
Sbjct: 437 KQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 436 RIEISKTIFDDMEV-RDTVSWNTMITGYTICGQHGD 470
+ + + + M V + V W ++++ C HG+
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSA---CRIHGE 528
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 246/544 (45%), Gaps = 69/544 (12%)
Query: 82 AVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMY------GKCGSDMWDVYK 135
+L+ ++ + L+ KQ+HAH+++ TV N +N + ++
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILR--------TVINHKLNSFLFNLSVSSSSINLSYALN 65
Query: 136 VFDRI-TEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLS 194
VF I + + + +N + L R + + ++ + + F+ + + A S +S
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 195 RRDGLRLGRQVHGNSLRVGEW-NTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNT 253
L G ++HG + ++ + F+ M MYA GR++ A+ +F RD+V+WNT
Sbjct: 126 ---ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 254 IVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRND 313
++ + EA +M + PD + + +++ AC + + I+ + + ND
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 314 ILID------------------------------NSFVGSALVDMYCNCREVECGRRVFD 343
+ +D N FV +A+V Y C ++ + +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 344 FISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFP 403
K + W MI+ Y +++Y +EAL +F +M +G+ P+ +M SV+ AC
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSVISACANLGILD 361
Query: 404 DKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYT 463
+ +H GL + + NAL++MY++ G ++ ++ +F+ M R+ VSW++MI +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 464 ICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKG 523
+ G+ DAL L M+ + NV +PN +T + VL GC + +G
Sbjct: 422 MHGEASDALSLFARMK-------QENV----------EPNEVTFVGVLYGCSHSGLVEEG 464
Query: 524 KEIHAYAIRNMLATDVVVG-SALVDMYAKCGCLNFARRVFDLMPV-RNVITWNVIIMAYG 581
K+I A T + +VD++ + L A V + MPV NV+ W ++ A
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 582 MHGE 585
+HGE
Sbjct: 525 IHGE 528
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVV 104
W + + S+ +EA+ + EM S I+PD + +V+ A A + L K +H+ +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 105 KYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLA 164
G S +++ N L+NMY KCG + VF+++ ++ VSW+SMI L G+ A
Sbjct: 372 VNGLE-SELSINNALINMYAKCGG-LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDA 429
Query: 165 LEAFRMMLYSNVEPSSFTLVSVALACSN 192
L F M NVEP+ T V V CS+
Sbjct: 430 LSLFARMKQENVEPNEVTFVGVLYGCSH 457
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/680 (35%), Positives = 388/680 (57%), Gaps = 40/680 (5%)
Query: 214 EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQ 273
E N F N ++ YAK ++ A+ LF D VS+NT++S + + A++ ++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 274 MALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCR 333
M G + DG +++ ++ AC + +D K++H +++ S V +A V Y
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGG-FDSYSSVNNAFVTYYSKGG 187
Query: 334 EVECGRRVF---DFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMS 390
+ VF D + D+ WN+MI YGQ++ +AL L+ +M G + T++
Sbjct: 188 LLREAVSVFYGMDELRDE--VSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLA 244
Query: 391 SVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIE---ISKTIFDDM 447
SV+ A + HG IK G ++ +V + L+D YS+ G + S+ +F ++
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 448 EVRDTVSWNTMITGYTICGQHGD-ALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSIT 506
D V WNTMI+GY++ + + A+ R+MQ + +P+ +
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-----------------RPDDCS 347
Query: 507 LMTVLPGCGALSALAKGKEIHAYAIRNMLATD-VVVGSALVDMYAKCGCLNFARRVFDLM 565
+ V C LS+ ++ K+IH AI++ + ++ + V +AL+ +Y K G L AR VFD M
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407
Query: 566 PVRNVITWNVIIMAYGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGM 625
P N +++N +I Y HG G E L L + M+ G + PN++TF+A+ +AC+H G
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-----IAPNKITFVAVLSACAHCGK 462
Query: 626 VSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSL 685
V EG + F MK+ + IEP +HY+C++DLLGRAGK+E+A + I+ MP + + AW++L
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK-PGSVAWAAL 521
Query: 686 LGACRIHQNVEIGEIAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVR 745
LGACR H+N+ + E AA L +++P A+ YV+L+N+Y+ A+ W++ VRK M+ +R
Sbjct: 522 LGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581
Query: 746 KEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEE 805
K+PGCSWIE + H F+A D SH +++ +LE + ++M+K GYV D + +E
Sbjct: 582 KKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEA 641
Query: 806 EKETL---LCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIIL 862
+ L HSEKLA+AFG+++T G + V KNLR+C DCH A KF+S + REII+
Sbjct: 642 GEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIV 701
Query: 863 RDVRRFHHFKNGTCSCGDYW 882
RD RFH FK+G CSCGDYW
Sbjct: 702 RDNLRFHCFKDGKCSCGDYW 721
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 253/541 (46%), Gaps = 67/541 (12%)
Query: 83 VLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCG--------------- 127
+LK+VA +DL GK +HA VK SS ++N VN+Y KCG
Sbjct: 15 LLKSVAE-RDLFTGKSLHALYVK-SIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 128 ---------------SDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMML 172
S + ++FD I + D VS+N++I+ + A+ F+ M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 173 YSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTF--IMNALMAMYAKL 230
E FTL + AC D + L +Q+H S+ G ++++ + NA + Y+K
Sbjct: 133 KLGFEVDGFTLSGLIAACC-----DRVDLIKQLHCFSVS-GGFDSYSSVNNAFVTYYSKG 186
Query: 231 GRVDDAKTLFKSFED-RDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASV 289
G + +A ++F ++ RD VSWN+++ + Q+ + +A+ ++M +G K D ++ASV
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 290 LPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVEC---GRRVFDFIS 346
L A + L+ L G++ H ++ NS VGS L+D Y C + +VF I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 347 DKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDK 405
+ +WN MI+GY N E EEA+ F +M+ + G P+ + V AC +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 406 EGIHGHAIKLGLGRDRY-VQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTI 464
+ IHG AIK + +R V NAL+ +Y + G ++ ++ +FD M + VS+N MI GY
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 465 CGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGK 524
G +AL+L + M LD + PN IT + VL C + +G+
Sbjct: 425 HGHGTEALLLYQRM--------------LDSGI---APNKITFVAVLSACAHCGKVDEGQ 467
Query: 525 EIHAYAIRNM-LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVR-NVITWNVIIMAYGM 582
E + + S ++D+ + G L A R D MP + + W ++ A
Sbjct: 468 EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527
Query: 583 H 583
H
Sbjct: 528 H 528
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 208/426 (48%), Gaps = 23/426 (5%)
Query: 61 AILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLV 120
A++ + M + + D F ++ A DL KQ+H V G+ S +V N V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFD-SYSSVNNAFV 180
Query: 121 NMYGKCGSDMWDVYKVFDRITE-KDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
Y K G + + VF + E +D+VSWNSMI + + AL ++ M++ +
Sbjct: 181 TYYSK-GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239
Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVD---D 235
FTL SV A ++L D L GRQ HG ++ G N+ + + L+ Y+K G D D
Sbjct: 240 MFTLASVLNALTSL---DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Query: 236 AKTLFKSFEDRDLVSWNTIVSSLSQNDKFL-EAVMFLRQMALRGIKPDGVSIASVLPACS 294
++ +F+ DLV WNT++S S N++ EAV RQM G +PD S V ACS
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 295 HLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGRRVFDFISDKKIALWN 354
+L K+IH A+++ I + V +AL+ +Y ++ R VFD + + +N
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416
Query: 355 AMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKE---GIHGH 411
MI GY Q+ + EAL+L+ +M + +G+ PN T +V+ AC + +
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLD-SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 412 AIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGD 470
K+ + Y + ++D+ R G++E ++ D M + +V+W ++ C +H +
Sbjct: 476 TFKIEPEAEHY--SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA---CRKHKN 530
Query: 471 ALMLLR 476
+ R
Sbjct: 531 MALAER 536
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 52/252 (20%)
Query: 383 WPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGR------ 436
W T ++ + + F K +H +K + Y+ N +++YS+ GR
Sbjct: 6 WKFKTFRDLLLKSVAERDLFTGKS-LHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64
Query: 437 -------------------------IEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDA 471
I I++ +FD++ DTVS+NT+I+GY + A
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 472 LMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAI 531
++L + M+ + E + TL ++ C L K++H +++
Sbjct: 125 MVLFKRMRKLGFE-----------------VDGFTLSGLIAACCDRVDLI--KQLHCFSV 165
Query: 532 RNMLATDVVVGSALVDMYAKCGCLNFARRVFDLM-PVRNVITWNVIIMAYGMHGEGQEVL 590
+ V +A V Y+K G L A VF M +R+ ++WN +I+AYG H EG + L
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 591 ELLKNMVAEGSR 602
L K M+ +G +
Sbjct: 226 ALYKEMIFKGFK 237
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 46/239 (19%)
Query: 60 EAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTL 119
EA+ S+ +M R +PD+ +F V A + + S KQIH +K + ++V N L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 120 VNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPS 179
+++Y K G ++ D VFDR+ E + VS+N MI + G AL ++ ML S + P+
Sbjct: 388 ISLYYKSG-NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 180 SFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGEWNTFIMNALMAMYAKLGRVDDAKTL 239
T V+V AC A G+VD+ +
Sbjct: 447 KITFVAVLSAC-------------------------------------AHCGKVDEGQEY 469
Query: 240 FKSFEDRDLVS-----WNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPAC 293
F + ++ + ++ ++ L + K EA F+ M KP V+ A++L AC
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVAWAALLGAC 525
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 520 LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
L GK +HA +++++A+ + + V++Y+KCG L++AR F NV ++NVI+ A
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMK 637
Y + +L + +P+ V++ L + + + M LF +M+
Sbjct: 84 YAKDSKIHIARQLFDEI---------PQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 341/584 (58%), Gaps = 26/584 (4%)
Query: 303 KEIHAYALRNDILIDNSFVGSALVDMYCNCRE---VECGRRVFDFISDK-KIALWNAMIT 358
++IHA+++R+ + I ++ +G L+ + + +VF I + +WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 359 GYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLG 418
GY + A L+ +M + P+ T ++ A E IH I+ G G
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 419 RDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGYTICGQHGDALMLLREM 478
YVQN+L+ +Y+ G + + +FD M +D V+WN++I G+ G+ +AL L EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 479 QNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAKGKEIHAYAIRNMLATD 538
N + KP+ T++++L C + AL GK +H Y I+ L +
Sbjct: 214 -------NSKGI----------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 539 VVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMAYGMHGEGQEVLELLKNMVA 598
+ + L+D+YA+CG + A+ +FD M +N ++W +I+ ++G G+E +EL K M
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM-- 314
Query: 599 EGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDDYGIEPSPDHYACVVDLLGR 658
E + G + P E+TF+ + ACSH GMV EG + F +M+++Y IEP +H+ C+VDLL R
Sbjct: 315 ESTEG--LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 659 AGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGEIAAQNLFLLEPDVASHYVL 718
AG+V+ AY+ I MP + W +LLGAC +H + ++ E A + LEP+ + YVL
Sbjct: 373 AGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 719 LSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEIHKFLAGDGSHQQSEQLHGF 778
LSN+Y+S Q W +RK+M GV+K PG S +E G+ +H+FL GD SH QS+ ++
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 779 LENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKN 838
L+ ++ R+R EGYVP S V +V EEEKE + HSEK+AIAF +++TP + I V KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 839 LRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCGDYW 882
LRVC DCH A K +SK+ +REI++RD RFHHFKNG+CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 205/415 (49%), Gaps = 19/415 (4%)
Query: 89 GIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSD--MWDVYKVFDRITEKDQV 146
G+ ++ +QIHA +++G +S + L+ S M +KVF +I + V
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 147 S-WNSMIATLCRFGKWDLALEAFRMMLYSN-VEPSSFTLVSVALACSNLSRRDGLRLGRQ 204
WN++I G A +R M S VEP + T + A + ++ +RLG
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA---DVRLGET 142
Query: 205 VHGNSLRVGEWN-TFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDK 263
+H +R G + ++ N+L+ +YA G V A +F ++DLV+WN++++ ++N K
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 264 FLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGS 323
EA+ +M +GIKPDG +I S+L AC+ + L GK +H Y ++ L N +
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLHSSN 261
Query: 324 ALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLW 383
L+D+Y C VE + +FD + DK W ++I G N + +EA+ LF ME GL
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 384 PNATTMSSVVPACVRSEAFPDKEGI-HGHAIKLGLGRDRYVQN--ALMDMYSRMGRIEIS 440
P T ++ AC S KEG + ++ + +++ ++D+ +R G+++ +
Sbjct: 322 PCEITFVGILYAC--SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 441 KTIFDDMEVR-DTVSWNTMITGYTICGQHGDA-LMLLREMQNMEEEKNRNNVYDL 493
M ++ + V W T++ C HGD+ L +Q ++ E N + Y L
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGA---CTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 29/381 (7%)
Query: 8 LTLLPSPPLSSLQTHQPPATTATSLPLPGSQTRCKESWIESLRSEARSNQFREAILSYIE 67
L LPSPP P + A + + W +R A A Y E
Sbjct: 60 LVSLPSPP---------PMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYRE 110
Query: 68 MTRSD-IQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKC 126
M S ++PD +P ++KAV + D+ LG+ IH+ V++ G+G S + V N+L+++Y C
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG-SLIYVQNSLLHLYANC 169
Query: 127 GSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSV 186
G D+ YKVFD++ EKD V+WNS+I GK + AL + M ++P FT+VS+
Sbjct: 170 G-DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 187 ALACSNLSRRDGLRLGRQVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFED 245
AC+ + L LG++VH ++VG N N L+ +YA+ GRV++AKTLF D
Sbjct: 229 LSACAKIG---ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 246 RDLVSWNTIVSSLSQNDKFLEAVMFLRQM-ALRGIKPDGVSIASVLPACSHLEMLDTGKE 304
++ VSW +++ L+ N EA+ + M + G+ P ++ +L ACSH M+ G E
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 305 IHAYALRNDILIDNSFVG-SALVDMYCNCREVECGRRVFDFIS----DKKIALWNAMI-- 357
+ +R + I+ +VD+ +V ++ +++I + +W ++
Sbjct: 346 -YFRRMREEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGA 401
Query: 358 -TGYGQNEYDEEALMLFIKME 377
T +G ++ E A + +++E
Sbjct: 402 CTVHGDSDLAEFARIQILQLE 422
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/613 (38%), Positives = 345/613 (56%), Gaps = 41/613 (6%)
Query: 286 IASVLPACSHLEMLDTGKEIHAYALRNDILIDNS--FVGSALVDMYCNCREVECGRRVFD 343
I S+ CS + L K++HA+ LR + + F+ ++ + + +V RVFD
Sbjct: 51 IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 344 FISDKKIALWNAMITGYGQN-EYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRSEAF 402
I + +WN +I + EEA ML+ KM E P+ T V+ AC F
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 403 PDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMITGY 462
+ + +H +K G G D YV N L+ +Y G +++++ +FD+M R VSWN+MI
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 463 TICGQHGDALMLLREMQNMEEEKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSALAK 522
G++ AL L REMQ E P+ T+ +VL C L +L+
Sbjct: 228 VRFGEYDSALQLFREMQRSFE------------------PDGYTMQSVLSACAGLGSLSL 269
Query: 523 GKEIHAYAIRNM---LATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579
G HA+ +R +A DV+V ++L++MY KCG L A +VF M R++ +WN +I+
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 580 YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639
+ HG +E + MV + V+PN VTF+ L AC+H G V++G F M D
Sbjct: 330 FATHGRAEEAMNFFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 640 YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGAC-RIHQNVEIG 698
Y IEP+ +HY C+VDL+ RAG + +A ++ MP + D A W SLL AC + +VE+
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD-AVIWRSLLDACCKKGASVELS 445
Query: 699 EIAAQNLFLLEPDVASH-------YVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCS 751
E A+N+ + D S YVLLS +Y+SA W+ VRK M E G+RKEPGCS
Sbjct: 446 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Query: 752 WIEFGDEIHKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTS--CVLHNVNEEEKET 809
IE H+F AGD SH Q++Q++ L+ + +R+R GY+PD S ++ N+ KE
Sbjct: 506 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 565
Query: 810 LLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFH 869
L HSE+LAIAFG++N PP T IR+ KNLRVCNDCH+ TK ISK+ + EII+RD RFH
Sbjct: 566 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 625
Query: 870 HFKNGTCSCGDYW 882
HFK+G+CSC DYW
Sbjct: 626 HFKDGSCSCLDYW 638
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 15/261 (5%)
Query: 60 EAILSYIEM-TRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANT 118
EA + Y +M R + PD FP VLKA A I S GKQ+H +VK+G+G V V N
Sbjct: 133 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNG 191
Query: 119 LVNMYGKCGS-DMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDLALEAFRMMLYSNVE 177
L+++YG CG D+ KVFD + E+ VSWNSMI L RFG++D AL+ FR M S E
Sbjct: 192 LIHLYGSCGCLDL--ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FE 248
Query: 178 PSSFTLVSVALACSNLSRRDGLRLGRQVHGNSLRVGE----WNTFIMNALMAMYAKLGRV 233
P +T+ SV AC+ L L LG H LR + + + N+L+ MY K G +
Sbjct: 249 PDGYTMQSVLSACAGLG---SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 234 DDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALR--GIKPDGVSIASVLP 291
A+ +F+ + RDL SWN ++ + + + EA+ F +M + ++P+ V+ +L
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 292 ACSHLEMLDTGKEIHAYALRN 312
AC+H ++ G++ +R+
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRD 386
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 38/407 (9%)
Query: 92 DLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGK------CGSDMWDVYKVFDRITEKDQ 145
D+S KQ+HA ++ Y T+ +YGK SD+ ++VFD I
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLF-----LYGKILQLSSSFSDVNYAFRVFDSIENHSS 114
Query: 146 VSWNSMI-ATLCRFGKWDLALEAFRMML-YSNVEPSSFTLVSVALACSNLSRRDGLRLGR 203
WN++I A + + A +R ML P T V AC+ + G G+
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF---GFSEGK 171
Query: 204 QVHGNSLRVG-EWNTFIMNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQND 262
QVH ++ G + ++ N L+ +Y G +D A+ +F +R LVSWN+++ +L +
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 263 KFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYALRN---DILIDNS 319
++ A+ R+M R +PDG ++ SVL AC+ L L G HA+ LR D+ +D
Sbjct: 232 EYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD-V 289
Query: 320 FVGSALVDMYCNCREVECGRRVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKM-EE 378
V ++L++MYC C + +VF + + +A WNAMI G+ + EEA+ F +M ++
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 379 VAGLWPNATTMSSVVPACVRSEAFPDKEGIHGHAIKLGLGRDRYVQNAL------MDMYS 432
+ PN+ T ++ AC F +K G + RD ++ AL +D+ +
Sbjct: 350 RENVRPNSVTFVGLLIAC-NHRGFVNK----GRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 433 RMGRIEISKTIFDDMEVR-DTVSWNTMITGYTICGQHGDALMLLREM 478
R G I + + M ++ D V W +++ C + G ++ L E+
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEI 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 321,137,863
Number of Sequences: 539616
Number of extensions: 13175006
Number of successful extensions: 42839
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 33012
Number of HSP's gapped (non-prelim): 2327
length of query: 882
length of database: 191,569,459
effective HSP length: 126
effective length of query: 756
effective length of database: 123,577,843
effective search space: 93424849308
effective search space used: 93424849308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)