Query 002776
Match_columns 882
No_of_seqs 272 out of 685
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 06:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002776.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002776hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02337 lipoxygenase 100.0 1E-265 2E-270 2298.6 76.1 866 9-882 1-866 (866)
2 PLN02305 lipoxygenase 100.0 1E-262 3E-267 2262.8 75.7 831 35-882 82-918 (918)
3 PLN02264 lipoxygenase 100.0 6E-261 1E-265 2249.3 72.5 831 35-882 85-919 (919)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 9E-203 2E-207 1767.3 36.6 665 187-861 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 3.1E-38 6.8E-43 306.2 14.5 137 35-178 1-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.2 4.2E-11 9.2E-16 111.2 10.4 84 69-165 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 99.1 5.4E-10 1.2E-14 104.3 9.4 93 68-176 17-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.9 8.6E-09 1.9E-13 97.4 10.8 95 67-176 18-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.8 1.3E-08 2.7E-13 96.4 9.1 80 68-166 19-99 (109)
10 cd01753 PLAT_LOX PLAT domain o 98.6 1.4E-07 2.9E-12 89.9 9.4 86 68-168 19-107 (113)
11 cd01756 PLAT_repeat PLAT/LH2 d 98.5 1E-06 2.2E-11 84.6 11.3 94 68-176 19-118 (120)
12 cd01752 PLAT_polycystin PLAT/L 98.3 3.8E-06 8.2E-11 80.7 10.6 94 68-175 19-117 (120)
13 cd01754 PLAT_plant_stress PLAT 98.2 6.1E-06 1.3E-10 80.5 10.0 89 68-168 19-119 (129)
14 cd01757 PLAT_RAB6IP1 PLAT/LH2 98.2 7.1E-06 1.5E-10 78.4 9.9 78 68-168 20-100 (114)
15 cd01755 PLAT_lipase PLAT/ LH2 77.9 17 0.00038 35.1 9.6 76 69-161 20-105 (120)
16 PF10474 DUF2451: Protein of u 28.2 45 0.00098 36.1 2.8 24 661-690 178-201 (234)
17 cd01758 PLAT_LPL PLAT/ LH2 dom 26.7 4.5E+02 0.0098 26.3 9.3 77 69-161 21-119 (137)
18 PF10281 Ish1: Putative stress 24.2 1.1E+02 0.0024 23.6 3.6 30 680-719 5-35 (38)
19 KOG2675 Adenylate cyclase-asso 24.0 2.2E+02 0.0048 33.7 7.3 114 547-706 91-221 (480)
20 PF12588 PSDC: Phophatidylseri 21.6 1.6E+02 0.0034 29.8 4.9 127 676-821 10-139 (141)
No 1
>PLN02337 lipoxygenase
Probab=100.00 E-value=1.1e-265 Score=2298.57 Aligned_cols=866 Identities=80% Similarity=1.321 Sum_probs=831.9
Q ss_pred hHhHHHHhhhcCccccccccccCCCcceEEEEEEEEeeccccccccccchhhhHhhhcCCcEEEEEeecccCCCCccccC
Q 002776 9 MFHKLKEKVCAWPITGTKTKGVDESKTKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRG 88 (882)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~~~~d~~~~~~g~~v~l~LVss~~~d~~~g~~g 88 (882)
|++++++.++|. +....+.++||+||+|+|+++|++++.++++|+++|++|++|+||||||+.++|+||++|
T Consensus 1 ~~~~~~~~~~~~--------~~~~~~~~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~g 72 (866)
T PLN02337 1 MLGGIIDAITGS--------NNKTKKEKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDPENGLRG 72 (866)
T ss_pred CcccccHhhhcC--------CccCccceEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEeccccccccCCcc
Confidence 455566666653 011112489999999999999999999999999999999999999999999888899899
Q ss_pred ccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCC
Q 002776 89 RLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHR 168 (882)
Q Consensus 89 k~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~~~~i~Fpc~sWV~~~~~ 168 (882)
|+++++.|++|..+...+.+++++|+|+|+||++||+||||+|+|.|++||||++|+|+++|++++|||+||||||++++
T Consensus 73 k~~k~a~l~~w~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~ 152 (866)
T PLN02337 73 KLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKR 152 (866)
T ss_pred ccCCccchhhhccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCC
Confidence 99999999999976555466777999999999999999999999999999999999999999889999999999999999
Q ss_pred CccceEeecCceeccCCCChHhHHHHHHHHHhhhcCCCCCccccCeeeeccccCCCCCCCCCCCCccccCCCCCCCCCCC
Q 002776 169 YKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPR 248 (882)
Q Consensus 169 ~~~~rvff~nk~yLP~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driY~y~~yndlG~P~~~~~~~rpvlggs~~~pypr 248 (882)
++.+||||+||+|||++||++|+++||+||++|||||+||||+||||||||+|||||+||++++++|||||||++|||||
T Consensus 153 ~~~~RiFF~nk~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPR 232 (866)
T PLN02337 153 YRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPR 232 (866)
T ss_pred CCCCceEecCCCcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHhhcc
Q 002776 249 RGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYE 328 (882)
Q Consensus 249 r~rtgr~~~~~d~~~e~~~~~~~~~~~vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~ 328 (882)
||||||+|+++||.+|||.+.....+||||||+|++.|+++|.++++|+++|.++|.++++++.+..+|++|+||++||+
T Consensus 233 R~rTgr~~t~~dp~~esr~~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~ 312 (866)
T PLN02337 233 RGRTGRKPTKTDPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYE 312 (866)
T ss_pred cccCCCCCCCCCCccccccccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhh
Confidence 99999999999999999976531157999999999999999999999999999999999999988999999999999999
Q ss_pred CCCCCCCCcchhhhhcccchHHHHHhhhccCccccccCCcccchhccccccCcHHHHHHHhcCCCcccccccccCCCCCC
Q 002776 329 GGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASN 408 (882)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~lk~p~P~v~~~~~~~W~~D~eFarQ~LaG~NP~~I~r~~~~P~~s~ 408 (882)
+|+++|.++..+.+++.+|++++|++++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++++
T Consensus 313 ~g~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ 392 (866)
T PLN02337 313 GGIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSK 392 (866)
T ss_pred cCCCCCCchHHHHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCccc
Confidence 99999987666778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCcccHHHHHhhcCCcCHHHHhhcCceeEecccccchhhhhcccCCCCccccceeEEeecCCCceeeEEEE
Q 002776 409 LDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIE 488 (882)
Q Consensus 409 ld~~~yg~~~s~it~e~i~~~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~yAp~~Lffl~~~g~L~PIAIq 488 (882)
|||++||+++|+||++||++.|+|+||+|||++|||||+||||.+|||+.++|...+++|||+||||++++|+|+|||||
T Consensus 393 ld~~~yg~~~s~iT~e~v~~~L~g~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k~yA~~tLffl~~dG~L~PlAIq 472 (866)
T PLN02337 393 LDPKKYGDQNSSITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKPLAIE 472 (866)
T ss_pred CChhhcCCccCccCHHHHHhccCCccHHHHHHcCCEEEEecchhcCcccccccCCCCccccceeEEEECCCCCEeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCeeeeCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCccCchhhccc
Q 002776 489 LSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLH 568 (882)
Q Consensus 489 L~~~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~ 568 (882)
|++|++.++++++.++||||+++++++|.|+|||+||++||++|||+|+||++||+++|||||||+||||++|||||||.
T Consensus 473 L~~p~~~~~~~g~~~~VfTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~ 552 (866)
T PLN02337 473 LSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLH 552 (866)
T ss_pred eccCCCCcccCCCCCCeECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHH
Confidence 99998877777889999999987777999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchHHHHHhcccCCccccccccchhhHHHHHHHHhhccccCCCCcchHHhhcCCCCCCCCCCcccccCCcCCc
Q 002776 569 PHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYP 648 (882)
Q Consensus 569 PHfr~Tl~IN~lAR~~LI~~gGiid~~~~~g~~~~els~~~yk~w~f~~~~lP~DL~~RG~~~~d~~~~~g~~l~l~~Yp 648 (882)
||||+||+||++||+.||++||++|+++++|+++++|++++|++|+|++++||+||++|||+++|+++|||+++.|||||
T Consensus 553 PHfr~Tl~IN~~AR~~LI~~gGiid~~~~~g~~~~els~~~yk~w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYP 632 (866)
T PLN02337 553 PHFRDTMNINALARQILINAGGILESTVFPGKYALEMSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYP 632 (866)
T ss_pred HHHHHHHHHHHHHHHheeCCCCeeeeeeccchhHHHHHHHHHhcCCcccccCHHHHHHcCCCccccccccccccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHhhhhcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhhccch
Q 002776 649 YAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASAL 728 (882)
Q Consensus 649 YrdDgL~iW~AI~~fV~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aSaq 728 (882)
||||||+||+||++||++||++||++|++|++|.|||+||+||+++|||++++++|||+|+|+++||++||+|||+||||
T Consensus 633 YrdDGL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaq 712 (866)
T PLN02337 633 YAVDGLEIWSAIETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASAL 712 (866)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCcccccccCCCccccCCCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccccCcCC
Q 002776 729 HAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDT 808 (882)
Q Consensus 729 HAAVNfgQy~y~gf~PN~P~~~r~p~P~kg~~~~~~l~~~~e~~~L~~LP~~~qa~~~m~~~~lLS~~~~de~yLG~~~~ 808 (882)
|||||||||+|+||+||+|++||+|||++++++|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||+|++
T Consensus 713 HAAVNfgQy~y~gfvPN~P~~~r~~~P~~~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~ 792 (866)
T PLN02337 713 HAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDT 792 (866)
T ss_pred hhhhhcCCcccccccCCCchhhcCCCCCCCchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCC
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCccccccccccCCCCCCCCCCCccCccCccccC
Q 002776 809 PEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI 882 (882)
Q Consensus 809 ~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~l~nr~g~~~~PY~~L~P~~~~~~~~~g~t~~gIpnSIsI 882 (882)
..|+.|+++++|+++|+++|++||++|++||+++++|||+||+++||+||+|++||+.+++|||||||||||||
T Consensus 793 ~~w~~d~~~~~a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 793 PEWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>PLN02305 lipoxygenase
Probab=100.00 E-value=1.4e-262 Score=2262.83 Aligned_cols=831 Identities=45% Similarity=0.813 Sum_probs=795.9
Q ss_pred ceEEEEEEEEeeccccccccccchhhhHhhhcCCcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEE
Q 002776 35 TKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFT 114 (882)
Q Consensus 35 ~~~~~~v~~~~k~~~~~~~~~~~~~d~~~~~~g~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~ 114 (882)
.++||+||+|+|+++|++++.++++|+++|++|++|+|||||++.++ +|| +||++ ++.|++|..+ ....+++++|+
T Consensus 82 ~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~-~~g-~gk~~-~~~l~~~~~~-~~~~~~~~~~~ 157 (918)
T PLN02305 82 IDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDP-VTG-SGKSV-ESSVRGWLPK-PSNDPHIVEYA 157 (918)
T ss_pred CeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccC-CCC-Ccccc-cchhhccccC-CCCCCCceEEE
Confidence 58999999999999999999999999999999999999999988755 787 99988 9999999976 33325677999
Q ss_pred EEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCCCccceEeecCceeccCCCChHhHHHH
Q 002776 115 ITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYR 194 (882)
Q Consensus 115 v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~~~~i~Fpc~sWV~~~~~~~~~rvff~nk~yLP~~tp~~l~~~R 194 (882)
|+|+|+++||+||||+|+|.|++||||++|+|+++|+ ++|||+||||||+.++++.+||||+||+|||++||++|+++|
T Consensus 158 ~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~-g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~R 236 (918)
T PLN02305 158 ADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDD-GPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLR 236 (918)
T ss_pred EEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCC-CeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccccCeeeeccccCCCCCCCCCCCCccccCCCCCCCCCCCcCCCCCCCCCCCCCCCcccCcCCCCc
Q 002776 195 REELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDI 274 (882)
Q Consensus 195 ~~EL~~~rg~g~g~r~~~driY~y~~yndlG~P~~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~ 274 (882)
|+||++|||||+||||+||||||||+|||||+||++++++|||||||+ |||||||||||+|+++||++|||..... .+
T Consensus 237 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~PYPRR~RTGR~~t~~Dp~~Esr~~~~~-~~ 314 (918)
T PLN02305 237 REDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEE-WPYPRRCRTGRPPTKKDPLCESRIEKPH-PV 314 (918)
T ss_pred HHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCC-CCCCCcCcCCCCCCCCCCcccccccCCC-Cc
Confidence 999999999999999999999999999999999999999999999988 9999999999999999999999975432 47
Q ss_pred ccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHhhccCCCCCCCCcchhhhhcccch--HHHH
Q 002776 275 YVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPW--EMLK 352 (882)
Q Consensus 275 ~vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~p~--~~~~ 352 (882)
||||||+|+++|+++|+++++|+++|.++|.|+++++.+..+|++|+||++||++|+++|.. ..+.+++ +|+ ++++
T Consensus 315 YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~-~~~~~~~-~p~~~~~~~ 392 (918)
T PLN02305 315 YVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE-EPKDIGL-NPFLGNFMK 392 (918)
T ss_pred CCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch-hhhhhhc-CCchHHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999973 1133444 887 8999
Q ss_pred HhhhccCccccccCCcccchhccccccCcHHHHHHHhcCCCcccccccccCCCCCCCCCcccCCCCCcccHHHHHhhcCC
Q 002776 353 ELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNE 432 (882)
Q Consensus 353 ~~~~~~~~~~lk~p~P~v~~~~~~~W~~D~eFarQ~LaG~NP~~I~r~~~~P~~s~ld~~~yg~~~s~it~e~i~~~L~G 432 (882)
++ +++++.+||||+|+||+.|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++||+..|+|
T Consensus 393 ~i-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G 471 (918)
T PLN02305 393 QV-LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG 471 (918)
T ss_pred Hh-hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC
Confidence 99 88889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhcCceeEecccccchhhhhcccCCCC-ccccceeEEeecCCCceeeEEEEecCCCCCCCCCCCCCeeeeCCCC
Q 002776 433 LTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAEN 511 (882)
Q Consensus 433 ~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~-~~yAp~~Lffl~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~ 511 (882)
+||+|||++|||||+||||++|||+.++|...+ +.|||+||||++++|+|+||||||++++..++ ...++||||+++
T Consensus 472 ~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~--p~~~~VftP~~d 549 (918)
T PLN02305 472 MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSS--PGNKFVYTHGHD 549 (918)
T ss_pred CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCC--CCcceeeCCCCC
Confidence 999999999999999999999999999998654 59999999999999999999999999865432 356789999876
Q ss_pred CCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCccCchhhcccccccccccchHHHHHhcccCCcc
Q 002776 512 GVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGV 591 (882)
Q Consensus 512 ~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGi 591 (882)
+++.|.|+||||||++||++|||+|+||++||++|||||||||||||++|||||||.||||+||+||++||++|||+||+
T Consensus 550 ~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGi 629 (918)
T PLN02305 550 ATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGI 629 (918)
T ss_pred CCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHhhc-cccCCCCcchHHhhcCCCCCCCCCCcccccCCcCCccchhhHHHHHHHHHHHHHHhhh
Q 002776 592 LENTVFPAKYAMEMSAVSYKN-WVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSF 670 (882)
Q Consensus 592 id~~~~~g~~~~els~~~yk~-w~f~~~~lP~DL~~RG~~~~d~~~~~g~~l~l~~YpYrdDgL~iW~AI~~fV~~yv~~ 670 (882)
+|++|++|+++|+|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||||||+||+||++||++||++
T Consensus 630 ie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~ 709 (918)
T PLN02305 630 IEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDH 709 (918)
T ss_pred eeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCCcccc
Q 002776 671 YYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVS 750 (882)
Q Consensus 671 YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~ 750 (882)
||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++|
T Consensus 710 YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~ 789 (918)
T PLN02305 710 FYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLM 789 (918)
T ss_pred hCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccccCcCCC--CCCCChHHHHHHHHHHHHH
Q 002776 751 RRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTP--EWTLDNEPLAAFERFGNRL 828 (882)
Q Consensus 751 r~p~P~kg~~~~~~l~~~~e~~~L~~LP~~~qa~~~m~~~~lLS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L 828 (882)
|+|||++++.+|.+|+.+||+++|++||++.||+.+|+++++||+|++||+|||++.+. .|+.|+++++|+++|+++|
T Consensus 790 Rrp~P~~~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L 869 (918)
T PLN02305 790 RKLIPQENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARL 869 (918)
T ss_pred cCCCCCCCCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHH
Confidence 99999888889999999999999999999999999999999999999999999999765 7999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccccCCccccccccccCCCCCCCCCCCccCccCccccC
Q 002776 829 LEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI 882 (882)
Q Consensus 829 ~~Ie~~I~~RN~~~~l~nr~g~~~~PY~~L~P~~~~~~~~~g~t~~gIpnSIsI 882 (882)
++||++|++||++++||||+||+++||+||+|++ ++|||||||||||||
T Consensus 870 ~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s-----~~G~T~rgIPNSISI 918 (918)
T PLN02305 870 EEIEKTINERNKDIRLKNRNGAGIPPYELLLPTS-----GPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHHhCCccccccCCCCCCCccccCCCC-----CCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999 999999999999998
No 3
>PLN02264 lipoxygenase
Probab=100.00 E-value=5.9e-261 Score=2249.27 Aligned_cols=831 Identities=45% Similarity=0.818 Sum_probs=794.9
Q ss_pred ceEEEEEEEEeeccccccccccchhhhHhhhcCCcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEE
Q 002776 35 TKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFT 114 (882)
Q Consensus 35 ~~~~~~v~~~~k~~~~~~~~~~~~~d~~~~~~g~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~ 114 (882)
+++||+|++|+|+++|++++.++++|+++|++|++|+||||||+.++ +|| +||+|+++.|++|..+ ....+++++|+
T Consensus 85 ~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~-~tg-~~~~~~~a~l~~~~~~-~~~~~~~~~y~ 161 (919)
T PLN02264 85 FKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDP-KTK-EPKKSKAAVLKDWSKK-SNIKAERVHYT 161 (919)
T ss_pred EEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccC-CCC-CccCCCcchhcccccC-CCCCCCceEEE
Confidence 68999999999999999999999999999999999999999987754 787 8999999999999976 34456777999
Q ss_pred EEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCCCccceEeecCceeccCCCChHhHHHH
Q 002776 115 ITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSNKTYLPCQTPEPLRKYR 194 (882)
Q Consensus 115 v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~~~~i~Fpc~sWV~~~~~~~~~rvff~nk~yLP~~tp~~l~~~R 194 (882)
|+|+||++||+||||+|+|.|++||||++|+|+++|+ ++|||+||||||++++++.+||||+||+|||++||++|+++|
T Consensus 162 ~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~-g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~R 240 (919)
T PLN02264 162 AEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFAC-GPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALR 240 (919)
T ss_pred EEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCC-CcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCccccCeeeeccccCCCCCCCCCCCCccccCCCCCCCCCCCcCCCCCCCCCCCCCCCcccCcCCCCc
Q 002776 195 REELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDI 274 (882)
Q Consensus 195 ~~EL~~~rg~g~g~r~~~driY~y~~yndlG~P~~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~ 274 (882)
++||++|||||+||||+||||||||+|||||+||++++++|||||||+ |||||||||||||+++||++|||..... .+
T Consensus 241 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~PYPRR~RTGR~~t~~dp~~Esr~~~~~-~i 318 (919)
T PLN02264 241 EKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKK-IPYPRRCRTGRLPTDSDMMAESRVEKPL-PM 318 (919)
T ss_pred HHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCC-CCCCCCCcCCCCCCCCCCcccccccCCC-ce
Confidence 999999999999999999999999999999999999999999999987 9999999999999999999999975432 47
Q ss_pred ccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHhhccCCCCCCCCcchhhhhcccch-HHHHH
Q 002776 275 YVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPW-EMLKE 353 (882)
Q Consensus 275 ~vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~p~-~~~~~ 353 (882)
||||||+|++.|+++|.++++|+++|.++|.++++++.+ +|++|+||++||++|+++|.....+.+++ +|+ +++++
T Consensus 319 YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~-~p~~~~~~~ 395 (919)
T PLN02264 319 YVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDIFKK-FPLPKVVTT 395 (919)
T ss_pred eCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhHhhc-CChHHHHHH
Confidence 999999999999999999999999999999999998864 99999999999999999987321123444 898 88998
Q ss_pred hhhccCccccccCCcccchhccccccCcHHHHHHHhcCCCcccccccccCCCCCCCCCcccCCCCCcccHHHHHhhcCCc
Q 002776 354 LVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNEL 433 (882)
Q Consensus 354 ~~~~~~~~~lk~p~P~v~~~~~~~W~~D~eFarQ~LaG~NP~~I~r~~~~P~~s~ld~~~yg~~~s~it~e~i~~~L~G~ 433 (882)
+ +++++.+||||+|+||+.|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+++|+||++||++.|+|+
T Consensus 396 ~-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G~ 474 (919)
T PLN02264 396 L-QESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDGL 474 (919)
T ss_pred h-hhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCCC
Confidence 8 888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCceeEecccccchhhhhcccCCCC-ccccceeEEeecCCCceeeEEEEecCCCCCCCCCCCCCeeeeCCCCC
Q 002776 434 TIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENG 512 (882)
Q Consensus 434 tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~-~~yAp~~Lffl~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~ 512 (882)
||+|||++|||||+||||++|||++++|...+ +.|||+||||++++|+|+||||||+++++.++ ...++||||++++
T Consensus 475 Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~--~~~~~VftP~~d~ 552 (919)
T PLN02264 475 SVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPN--SRSKRVVTPPVDA 552 (919)
T ss_pred cHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCC--cCcceeECCCCCC
Confidence 99999999999999999999999999998665 49999999999999999999999999864432 2578999997666
Q ss_pred CCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCccCchhhcccccccccccchHHHHHhcccCCccc
Q 002776 513 VEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVL 592 (882)
Q Consensus 513 ~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGii 592 (882)
+++|.|+||||||++||++|||+|+||++||+++|||||||+||||.+|||||||.||||+||+||++||+.|||+||++
T Consensus 553 ~~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGii 632 (919)
T PLN02264 553 TSNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVI 632 (919)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceE
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHhhc-cccCCCCcchHHhhcCCCCCCCCCCcccccCCcCCccchhhHHHHHHHHHHHHHHhhhh
Q 002776 593 ENTVFPAKYAMEMSAVSYKN-WVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFY 671 (882)
Q Consensus 593 d~~~~~g~~~~els~~~yk~-w~f~~~~lP~DL~~RG~~~~d~~~~~g~~l~l~~YpYrdDgL~iW~AI~~fV~~yv~~Y 671 (882)
|++|++|+++++|++++|++ |+|++++||+||++|||+++|+++||||++.|||||||||||+||+||++||++||++|
T Consensus 633 d~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~Y 712 (919)
T PLN02264 633 ESCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERY 712 (919)
T ss_pred EEeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCCccccC
Q 002776 672 YPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSR 751 (882)
Q Consensus 672 Y~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r 751 (882)
|++|++|++|.|||+||+||++.||+++++++|||+|+|++|||++||+|||+|||||||||||||+|+||+||+|++||
T Consensus 713 Y~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r 792 (919)
T PLN02264 713 YPDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMR 792 (919)
T ss_pred CCChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccccCcCCC-CCCCChHHHHHHHHHHHHHHH
Q 002776 752 RFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTP-EWTLDNEPLAAFERFGNRLLE 830 (882)
Q Consensus 752 ~p~P~kg~~~~~~l~~~~e~~~L~~LP~~~qa~~~m~~~~lLS~~~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~~ 830 (882)
+|||++++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+|||+|..+ .|+.|+++++||++|+++|++
T Consensus 793 rp~P~~~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~e 872 (919)
T PLN02264 793 RLIPDESDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGR 872 (919)
T ss_pred CCCCCCCChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHHH
Confidence 9999888899999999999999999999999999999999999999999999998755 899999999999999999999
Q ss_pred HHHHHHHHhCCcccccccCCccccccccccCCCCCCCCCCCccCccCccccC
Q 002776 831 IENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI 882 (882)
Q Consensus 831 Ie~~I~~RN~~~~l~nr~g~~~~PY~~L~P~~~~~~~~~g~t~~gIpnSIsI 882 (882)
||++|++||++++||||+||+++||+||+|++ ++|||||||||||||
T Consensus 873 Ie~~I~~RN~~~~~knR~G~~~~PY~lL~P~s-----~~G~T~~gIPNSISI 919 (919)
T PLN02264 873 IEKEIEKRNADPSRRNRCGAGVLPYELLAPSS-----EPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHHHHcCCccccccCCCCCCCceeeCCCC-----CCCCCcCCCCCcccC
Confidence 99999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=8.7e-203 Score=1767.31 Aligned_cols=665 Identities=60% Similarity=1.007 Sum_probs=583.5
Q ss_pred ChHhHHHHHHHHHhhhcCCCCCccccCeeeeccccCCCCCCCCCCCCccccCCCCCCCCCCCcCCCCCCCCCCCCCCCcc
Q 002776 187 PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERR 266 (882)
Q Consensus 187 p~~l~~~R~~EL~~~rg~g~g~r~~~driY~y~~yndlG~P~~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~ 266 (882)
|.+|+++|++||++|||||+||||+||||||||||||||+||++++++|||||||++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHhhccCCCCCCCCcchhhhhccc
Q 002776 267 LPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRI 346 (882)
Q Consensus 267 ~~~~~~~~~vPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~ 346 (882)
. ..+||||||+|++.|+.+|.++++|+++|.++|.|++++..+..+|+||+||++||++|+++| .+.+.+.+
T Consensus 81 ~----~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~----~~~~~~~~ 152 (667)
T PF00305_consen 81 S----GDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLP----TDLLKKLI 152 (667)
T ss_dssp -----SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE------HHHHCCHT
T ss_pred c----ccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccch----hhHhhhcC
Confidence 2 379999999999999999999999999999999999998888899999999999999999887 34566778
Q ss_pred chHHHHHhhhccCccccccCCcccchhccccccCcHHHHHHHhcCCCcccccccccCCCCCCCCCcccCCCCCcccHHHH
Q 002776 347 PWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADI 426 (882)
Q Consensus 347 p~~~~~~~~~~~~~~~lk~p~P~v~~~~~~~W~~D~eFarQ~LaG~NP~~I~r~~~~P~~s~ld~~~yg~~~s~it~e~i 426 (882)
|+++++++++++++.++|||+|+|+++++++|++|+|||||+|||+||++|+||++||++++||+++||+++|+||++||
T Consensus 153 ~~~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i 232 (667)
T PF00305_consen 153 PLELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHI 232 (667)
T ss_dssp TSTTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHH
T ss_pred cHHHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcCHHHHhhcCceeEecccccchhhhhcccCCCCccccceeEEeecCCCceeeEEEEecCCCCCCCCCCCCCeee
Q 002776 427 ERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVF 506 (882)
Q Consensus 427 ~~~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~yAp~~Lffl~~~g~L~PIAIqL~~~~~~~~~~~~~~~Vf 506 (882)
+..|+|+||++||++|||||+|||++++|++++||+.+.+.|||+||||++++|+|+||||||++|++.+. +..++||
T Consensus 233 ~~~l~g~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~--~~~~~v~ 310 (667)
T PF00305_consen 233 EPQLEGLTLEEALKDGRLFILDYHDLFGPYLNKINEKGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGP--PQFNPVF 310 (667)
T ss_dssp HHHCHCS-HHHHHHTT-EEEEEEGGGTTHHHHHHTTCCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS---EEEEEE
T ss_pred hhccCCCcHHHHHhcCCeEEEeehhhccccccccccCCcEeccceeEEEEcCCCCEeeeEEeccCCCCccc--Cccceee
Confidence 99999999999999999999999999999999999966679999999999999999999999998854322 5578999
Q ss_pred eCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCccCchhhcccccccccccchHHHHHhcc
Q 002776 507 TPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILI 586 (882)
Q Consensus 507 tP~d~~~~~~~W~LAK~~v~~aD~~~HqlvsHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI 586 (882)
||+++++.+|.|+|||+||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||
T Consensus 311 tP~~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li 390 (667)
T PF00305_consen 311 TPSDDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLI 390 (667)
T ss_dssp -TTSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTS
T ss_pred ecCCCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhh
Confidence 99955555688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccchhhHHHHHHHHhhccccCCCCcchHHhhcCCCCCCCCCCcccccCCcCCccchhhHHHHHHHHHHHHH
Q 002776 587 NAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKE 666 (882)
Q Consensus 587 ~~gGiid~~~~~g~~~~els~~~yk~w~f~~~~lP~DL~~RG~~~~d~~~~~g~~l~l~~YpYrdDgL~iW~AI~~fV~~ 666 (882)
++||+||++|++|+++++|++++|++|+|++++||+||++|||+++|++++||+++.|||||||+|||+||+||++||++
T Consensus 391 ~~gG~id~~~~~g~~~~~l~~~~y~~~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~ 470 (667)
T PF00305_consen 391 NAGGIIDKTFSPGKYGMELSSRAYKNWRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSD 470 (667)
T ss_dssp STTSHHHHHSTTTTTHHHHHHHHHTT--GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhHHHHHHHHHHhhCCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCCccccCChHHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCC
Q 002776 667 YCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNR 746 (882)
Q Consensus 667 yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~ 746 (882)
||++||++|++|++|.|||+||+||+++||+++++.+||++|+|+++||++||+|||+|||||||||||||+|+||+||+
T Consensus 471 ~v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~ 550 (667)
T PF00305_consen 471 YVNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNR 550 (667)
T ss_dssp HHHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS
T ss_pred hhhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCC
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCChh--hhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccccCcCCCCCCCChHHHHHHHHH
Q 002776 747 PTVSRRFMPEPGTPE--YAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERF 824 (882)
Q Consensus 747 P~~~r~p~P~kg~~~--~~~l~~~~e~~~L~~LP~~~qa~~~m~~~~lLS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F 824 (882)
|++||+++|.+++++ |++++.+||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|+++|
T Consensus 551 P~~~r~~~P~~~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~F 630 (667)
T PF00305_consen 551 PTALRRPMPPPTTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFERF 630 (667)
T ss_dssp -S-BSSSS--TSSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHHH
T ss_pred ChhhcccCCCCCcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHHH
Confidence 999999999877777 889999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcccccccCCccccccccccC
Q 002776 825 GNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPN 861 (882)
Q Consensus 825 ~~~L~~Ie~~I~~RN~~~~l~nr~g~~~~PY~~L~P~ 861 (882)
+++|++||++|++||+++++|||+|++++||+||+||
T Consensus 631 ~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 631 QEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 9999999999999999999999999999999999997
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=3.1e-38 Score=306.17 Aligned_cols=137 Identities=45% Similarity=0.826 Sum_probs=127.5
Q ss_pred ceEEEEEEEEeeccccccccccchhhhHhhhcCCcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEE
Q 002776 35 TKIKGTVVLMKKNVLDFNDMKASFLDRLHELLGKGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFT 114 (882)
Q Consensus 35 ~~~~~~v~~~~k~~~~~~~~~~~~~d~~~~~~g~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~ 114 (882)
.++||+|++|+|++++++++. +.+|++.|++|++|+||||||+.++ .|| +||+++++.|++|..+. +++++|+
T Consensus 1 ~~vka~V~v~~k~~~~~~~~~-~~~D~~~~llGk~v~lqLVSs~~d~-~tg-~~k~~~~~~l~~~~~~~----~~e~~y~ 73 (137)
T cd01751 1 VKVKATVTVMKKNKLDLNDDG-SGLDDLDDLLGRSLLLELVSSELDP-KTG-KGKKGKAAFLEGWGKSL----AGESAYE 73 (137)
T ss_pred CEEEEEEEEEEeecccccccc-chhhhHHHhhCCeEEEEEEEeeecC-CCC-CcccccceeeecccccC----CcceEEE
Confidence 369999999999999999977 9999999999999999999998755 687 99999999999998643 4566999
Q ss_pred EEeecCCCCCCceeEEeecCCCCceeEeEEEEeecCCCceEEEEecccccCCCCCccceEeecC
Q 002776 115 ITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFFSN 178 (882)
Q Consensus 115 v~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~~~~i~Fpc~sWV~~~~~~~~~rvff~n 178 (882)
++|+||++||+||||+|+|+|++||||++|+|+++|+.++|||+|||||||+++++.+||||+|
T Consensus 74 ~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 74 AEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 9999999999999999999999999999999999998899999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.24 E-value=4.2e-11 Score=111.23 Aligned_cols=84 Identities=43% Similarity=0.751 Sum_probs=64.3
Q ss_pred cEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEeecCC-CCceeEeEEEEe
Q 002776 69 GVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH-HSQFYLKTVTLE 147 (882)
Q Consensus 69 ~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~-~~e~fl~~i~l~ 147 (882)
+|+|+|+|+ .++ +| .+....++.|. +..+...+|.++ ++.++|++++|.|+|.+ ..+|||++|+|+
T Consensus 20 ~V~l~L~g~-~~~--s~----~~~~~~~~~~~----f~~g~~~~f~v~--~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~ 86 (105)
T smart00308 20 SVSLSLVGA-EGD--GK----ESKLDYLFKGI----FARGSTYEFTFD--VDEDFGELGAVKIKNEHRHPEWFLKSITVK 86 (105)
T ss_pred eEEEEEEeC-CCC--Cc----ceeccccCCcc----ccCCceEEEEEe--cccCCCCcEEEEEEeCCCCCCeEEEEEEEE
Confidence 699999995 433 11 23444555443 333555555544 78999999999999998 899999999998
Q ss_pred ecCCCceEEEEecccccC
Q 002776 148 DVPGHGRIHFVCNSWVYP 165 (882)
Q Consensus 148 ~~p~~~~i~Fpc~sWV~~ 165 (882)
+.+.++.++|+||+||++
T Consensus 87 ~~~~~~~~~F~c~~Wl~~ 104 (105)
T smart00308 87 DLPTGGKYHFPCNSWVYP 104 (105)
T ss_pred ECCCCCEEEEEcCceeCC
Confidence 777788999999999986
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=99.07 E-value=5.4e-10 Score=104.31 Aligned_cols=93 Identities=26% Similarity=0.363 Sum_probs=73.6
Q ss_pred CcEEEEEeecccCCCCccccCccCchhccc-cccccCCCCCCceEEEEEEeecCCCCCCceeEEeecC---CCCceeEeE
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLE-KWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKT 143 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~-~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~e~fl~~ 143 (882)
.+|+|+|++ +.+. +.+..|. .+... . +..++|.++. +.++|++.+|.|++. +...|||++
T Consensus 17 ~~V~i~l~G-~~g~---------s~~~~l~~~~~~~--~--g~~d~F~i~~--~~~lG~i~~i~i~~~~~~~~~~W~l~~ 80 (113)
T PF01477_consen 17 ANVYITLYG-SKGK---------SGEIELLDPSGFN--F--GSTDTFTIET--PEDLGEIQKIRIWHDGSGPSPSWYLDS 80 (113)
T ss_dssp SEEEEEEEE-TTEE---------EEEEEEEEEEETS--T--TEEEEEEEEE--SSCGCSEEEEEEEEESSSSSSEEEEEE
T ss_pred CeEEEEEEE-CCCC---------cceEEEeeeeecc--c--CceEEeeeee--cccCCCCcEEEEEEccCCCccceEEEE
Confidence 459999999 3322 2333333 33322 1 6777888774 789999999999987 789999999
Q ss_pred EEEeecCCCceEEEEecccccCCCCCccceEee
Q 002776 144 VTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFF 176 (882)
Q Consensus 144 i~l~~~p~~~~i~Fpc~sWV~~~~~~~~~rvff 176 (882)
|+|...+.+..+.|+||+||....+++.+|+||
T Consensus 81 V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 81 VVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred EEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 999877778899999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.90 E-value=8.6e-09 Score=97.36 Aligned_cols=95 Identities=16% Similarity=0.200 Sum_probs=72.4
Q ss_pred CCcEEEEEeecccCCCCccccCccCchhcccc-ccccCCCCCCceEEEEEEeecCCCCCCceeEEeecCCCC---ceeEe
Q 002776 67 GKGVSMQLISAVNADPANELRGRLGKVAYLEK-WITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHS---QFYLK 142 (882)
Q Consensus 67 g~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~-~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~---e~fl~ 142 (882)
..+|+|+|+++ .++ +....|.. +.. +..+...+|.|+ .+.++|++.+|.|++.+.. +|||+
T Consensus 18 ~~~v~i~l~g~-~g~---------s~~~~l~~~~~~---f~~g~~~~f~v~--~~~~lG~i~~v~l~~d~~g~~~~W~l~ 82 (116)
T cd00113 18 DSNISLALYGE-NGN---------SSDIPILDGPGS---FERGSTDTFQID--LKLDIGDITKVYLRRDGSGLSDGWYCE 82 (116)
T ss_pred cCEEEEEEEeC-CCC---------cccEEccCCCCc---ccCCCceEEEEe--ccCCCcCeEEEEEEECCCCCCCCEEEe
Confidence 35799999983 322 33344432 322 344777788776 5789999999999987654 99999
Q ss_pred EEEEeecCCCceEEEEecccccCCCCCccceEee
Q 002776 143 TVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFF 176 (882)
Q Consensus 143 ~i~l~~~p~~~~i~Fpc~sWV~~~~~~~~~rvff 176 (882)
+|+|+....+..++|+||+||.....++..|+|.
T Consensus 83 ~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 83 SITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred EEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 9999877767899999999999998888888863
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.83 E-value=1.3e-08 Score=96.36 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=63.3
Q ss_pred CcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEeecCC-CCceeEeEEEE
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH-HSQFYLKTVTL 146 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~-~~e~fl~~i~l 146 (882)
.+|+|+||+ +.++ |.+..|++ + +..|.+++|.|+ ++++|+.-.|.|.|.. .+.|||++|+|
T Consensus 19 ~~V~i~L~G-~~g~---------S~~~~L~~---~--F~~G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V 80 (109)
T cd02899 19 GTIEITLLG-SSGR---------SNPKTLSQ---G--FYPGSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRI 80 (109)
T ss_pred ceEEEEEEE-CCCC---------cCCEEccC---c--cCCCceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEE
Confidence 469999999 4444 33344543 3 445889999887 7999999999998874 77899999999
Q ss_pred eecCCCceEEEEecccccCC
Q 002776 147 EDVPGHGRIHFVCNSWVYPT 166 (882)
Q Consensus 147 ~~~p~~~~i~Fpc~sWV~~~ 166 (882)
++ |.+..++||||+|+...
T Consensus 81 ~~-~~g~~~~Fpc~rWla~~ 99 (109)
T cd02899 81 KS-EDGKVFAFNVKRWIGYP 99 (109)
T ss_pred EC-CCCCEEEEEcceeeCCc
Confidence 85 87788999999999753
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=98.63 E-value=1.4e-07 Score=89.90 Aligned_cols=86 Identities=13% Similarity=0.226 Sum_probs=66.1
Q ss_pred CcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEeecC---CCCceeEeEE
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTV 144 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~e~fl~~i 144 (882)
-+|+|+|++ +.++ |.+..|++...+ +..|.+++|.|+ .+.++|++-.|.|+.. ....|||+.|
T Consensus 19 a~V~i~l~G-~~g~---------S~~~~L~~~~~~--FerG~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V 84 (113)
T cd01753 19 DYIYLTLVG-TAGE---------SEKQLLDRPGYD--FERGAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYI 84 (113)
T ss_pred cEEEEEEEE-CCCc---------ccCEEcCCCCCc--cCCCCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEE
Confidence 359999999 3433 345556654334 445888899888 4789999999999965 4789999999
Q ss_pred EEeecCCCceEEEEecccccCCCC
Q 002776 145 TLEDVPGHGRIHFVCNSWVYPTHR 168 (882)
Q Consensus 145 ~l~~~p~~~~i~Fpc~sWV~~~~~ 168 (882)
+|++. .+...+||||+|+.....
T Consensus 85 ~V~~~-~~~~~~F~c~rWl~~~~~ 107 (113)
T cd01753 85 TVTGP-GGDEYHFPCYRWIEGYGT 107 (113)
T ss_pred EEEcC-CCCEEEEEhHHeECCCCE
Confidence 99854 467899999999987643
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.49 E-value=1e-06 Score=84.58 Aligned_cols=94 Identities=18% Similarity=0.250 Sum_probs=71.0
Q ss_pred CcEEEEEeecccCCCCccccCccCchhccccc--cccCCCCCCceEEEEEEeecCCCCCCceeEEeecCC---CCceeEe
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLEKW--ITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH---HSQFYLK 142 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~--~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~e~fl~ 142 (882)
.+|+|+|++ +.++ |....|+++ ... +..|+.++|.++. .++|++-.|.|+... ...|||+
T Consensus 19 a~V~i~L~G-~~g~---------s~~~~L~~~~~~~~--FerGs~d~F~i~~---~~lG~l~~i~i~~d~~g~~~~W~~~ 83 (120)
T cd01756 19 ANVFITLYG-ENGD---------TGKRKLKKSNNKNK--FERGQTDKFTVEA---VDLGKLKKIRIGHDNSGLGAGWFLD 83 (120)
T ss_pred cEEEEEEEe-CCCc---------cccEEccCCCcCCc--ccCCCeEEEEEEe---cCCCCeEEEEEEECCCCCCCCcEEe
Confidence 469999999 3433 456667764 334 4558888998884 799999999999753 5789999
Q ss_pred EEEEeecCCCceEEEEecccccCCCCC-ccceEee
Q 002776 143 TVTLEDVPGHGRIHFVCNSWVYPTHRY-KYDRVFF 176 (882)
Q Consensus 143 ~i~l~~~p~~~~i~Fpc~sWV~~~~~~-~~~rvff 176 (882)
.|+|.....+...+||||+|+...+.. ...|+|.
T Consensus 84 ~V~V~~~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 84 KVEIREPGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred EEEEEECCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 999987665788999999999876542 3456654
No 12
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=98.32 E-value=3.8e-06 Score=80.67 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=68.3
Q ss_pred CcEEEEEeecccCCCCccccCccCchhcccccc-ccCCCCCCceEEEEEEeecCCCCCCceeEEeecC---CCCceeEeE
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLEKWI-TTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKT 143 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~-~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~e~fl~~ 143 (882)
-+|+|+|++ +.++ |.+..|.+.. .. +..|.+.+|.|. .+.++|++-.|.|... ....|||++
T Consensus 19 a~V~i~L~G-~~g~---------s~~~~L~~~~~~~--F~rG~~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~ 84 (120)
T cd01752 19 AKVTITLYG-AEGE---------SEPHHLRDPEKPI--FERGSVDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSR 84 (120)
T ss_pred cEEEEEEEe-CCCC---------cccEEcCCCCccc--eeCCCeeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEE
Confidence 469999999 4433 3445565432 23 445888888887 4689999999999754 467999999
Q ss_pred EEEeecCCCceEEEEecccccCCCC-CccceEe
Q 002776 144 VTLEDVPGHGRIHFVCNSWVYPTHR-YKYDRVF 175 (882)
Q Consensus 144 i~l~~~p~~~~i~Fpc~sWV~~~~~-~~~~rvf 175 (882)
|+|.+...+...+||||+|+...+. -...|+|
T Consensus 85 V~V~~~~t~~~~~F~~~rWl~~~~~d~~~~r~~ 117 (120)
T cd01752 85 VIVRDLQTGKKWFFLCNDWLSVEEGDGTVERTF 117 (120)
T ss_pred EEEEECCCCcEEEEEeCcEECCcCCCCEEEEEE
Confidence 9998655567899999999987644 3345554
No 13
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.23 E-value=6.1e-06 Score=80.52 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=63.0
Q ss_pred CcEEEEEeecccCCCCccccCccCchhcc-cccc-----ccCCCCCCceEEEEEEeecCCCCCCceeEEeecC---CCCc
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYL-EKWI-----TTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQ 138 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l-~~~~-----~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~e 138 (882)
-+|+|+|++ +.++ |.+..+ ++|. ....+..|.+++|.|+ .+.++|++-.|.|+.. ....
T Consensus 19 anV~i~l~G-~~G~---------s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~--~~~~lG~l~~irI~HDn~G~~p~ 86 (129)
T cd01754 19 SRISLQIYD-ADGP---------GLRIANLEAWGGLMGAGHDYFERGNLDRFSGR--GPCLPSPPCWMNLTSDGTGNHPG 86 (129)
T ss_pred ceEEEEEEe-CCCC---------cccEEcccccccccccccccccCCCccEEEEE--eccCCCCeEEEEEEECCCCCCCC
Confidence 369999999 4444 222333 2221 1112455888999988 4788999999999854 4789
Q ss_pred eeEeEEEEeecCC---CceEEEEecccccCCCC
Q 002776 139 FYLKTVTLEDVPG---HGRIHFVCNSWVYPTHR 168 (882)
Q Consensus 139 ~fl~~i~l~~~p~---~~~i~Fpc~sWV~~~~~ 168 (882)
|||.+|+|++... +..++||||+|+...+.
T Consensus 87 W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 87 WYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 9999999986543 24799999999976654
No 14
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=98.22 E-value=7.1e-06 Score=78.44 Aligned_cols=78 Identities=10% Similarity=0.102 Sum_probs=57.5
Q ss_pred CcEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEeecC---CCCceeEeEE
Q 002776 68 KGVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTV 144 (882)
Q Consensus 68 ~~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~e~fl~~i 144 (882)
.+|+|+|++ +.++ |.+..|+.. ...|.++ +.++|..-.|.|+.. ....|||++|
T Consensus 20 anV~i~L~G-~~g~---------s~~~~L~~~----------~f~~~v~---~~~LG~L~~irIwHDnsG~~~~Wfl~~V 76 (114)
T cd01757 20 ANPWICVSG-ELGE---------TPPLQIPKN----------SLEMTFD---CQNLGKLTTVQIGHDNSGLLAKWLVEYV 76 (114)
T ss_pred ceEEEEEEE-cCCC---------cCCEEecCC----------ceEEEEe---cCCcCCcEEEEEEECCCCCCCCeeeeEE
Confidence 359999999 4544 344555421 1134443 489999999999864 3788999999
Q ss_pred EEeecCCCceEEEEecccccCCCC
Q 002776 145 TLEDVPGHGRIHFVCNSWVYPTHR 168 (882)
Q Consensus 145 ~l~~~p~~~~i~Fpc~sWV~~~~~ 168 (882)
+|++.+.+..++||||+|+...+.
T Consensus 77 ~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 77 MVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred EEEeCCCCCEEEEecCceecCCCC
Confidence 999878788999999999986543
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=77.93 E-value=17 Score=35.07 Aligned_cols=76 Identities=8% Similarity=0.053 Sum_probs=49.6
Q ss_pred cEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEee--cCC--------CCc
Q 002776 69 GVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIR--NHH--------HSQ 138 (882)
Q Consensus 69 ~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~--n~~--------~~e 138 (882)
.|.+.|.| +.++ |+...|.. .. ...+.+.+|-|. .+.++|..-.|.++ |.- ...
T Consensus 20 ~v~v~L~G-~~g~---------s~~~~l~~--~~--~~~g~~~sfli~--t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~ 83 (120)
T cd01755 20 TFTVSLYG-TKGE---------TEQLPIVL--GE--LKPNKTYSFLID--TEVDIGDLLKVKFKWENNVINSNSGETLPK 83 (120)
T ss_pred cEEEEEEc-CCCC---------cccEEEeC--Cc--ccCCCEEEEEEE--cCCCccceEEEEEEEcCCCcccccccCCCc
Confidence 58889998 4444 23344431 11 234666667666 58999998888777 221 468
Q ss_pred eeEeEEEEeecCCCceEEEEecc
Q 002776 139 FYLKTVTLEDVPGHGRIHFVCNS 161 (882)
Q Consensus 139 ~fl~~i~l~~~p~~~~i~Fpc~s 161 (882)
||++.|+|+....+. ...-|.+
T Consensus 84 ~~~~~I~Vq~get~~-~~~FC~~ 105 (120)
T cd01755 84 LGARKIRVKSGETQK-KFTFCSQ 105 (120)
T ss_pred EEEEEEEEEECCCCC-EEEEECC
Confidence 999999998776544 4445766
No 16
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=28.16 E-value=45 Score=36.10 Aligned_cols=24 Identities=29% Similarity=0.731 Sum_probs=20.2
Q ss_pred HHHHHHHhhhhcCCCccccCChHHHHHHHH
Q 002776 661 ETWVKEYCSFYYPRDHLIQGDNELQSWWEE 690 (882)
Q Consensus 661 ~~fV~~yv~~YY~~D~~V~~D~ELQaW~~E 690 (882)
.+||..||..|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 479999999999 345689999986
No 17
>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL). LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=26.66 E-value=4.5e+02 Score=26.27 Aligned_cols=77 Identities=10% Similarity=0.102 Sum_probs=45.6
Q ss_pred cEEEEEeecccCCCCccccCccCchhccccccccCCCCCCceEEEEEEeecCCCCCCceeEEe-ecCC------------
Q 002776 69 GVSMQLISAVNADPANELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFII-RNHH------------ 135 (882)
Q Consensus 69 ~v~l~LVss~~~d~~~g~~gk~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v-~n~~------------ 135 (882)
.|.+.|.+ +.++ |+...|.. ... ...+.+.+|-|+ .+.++|..-.|.+ ++..
T Consensus 21 ~v~i~L~G-~~g~---------S~~~~l~~--~~~-~~~G~t~sfLi~--t~~dlG~L~~vk~~W~~n~~~~~sW~~~~~ 85 (137)
T cd01758 21 TFTISLYG-TLGE---------SENLPLTL--PEG-ITGNKTNSFLIT--TEKDIGDLLMLKLKWEGSSLWSNSWWTVQT 85 (137)
T ss_pred eEEEEEEc-CCCc---------ccCEEEec--Ccc-cCCCCeEEEEEE--CCCCcCCEEEEEEEEeCCCCCChhhhcccc
Confidence 58888887 3433 33344431 110 123666666665 6899999988888 4321
Q ss_pred ---------CCceeEeEEEEeecCCCceEEEEecc
Q 002776 136 ---------HSQFYLKTVTLEDVPGHGRIHFVCNS 161 (882)
Q Consensus 136 ---------~~e~fl~~i~l~~~p~~~~i~Fpc~s 161 (882)
....+++.|+|+....+.++ --|.+
T Consensus 86 ~~~~~~~~~~p~l~~~~I~Vk~GEtq~~~-~FC~~ 119 (137)
T cd01758 86 IIPWSGWWRGSGLTIRKIRVKAGETQKKM-TFCAE 119 (137)
T ss_pred ccccccccCCCeEEEEEEEEEeCCCccEE-EECCC
Confidence 24556899999744443444 44765
No 18
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=24.20 E-value=1.1e+02 Score=23.58 Aligned_cols=30 Identities=33% Similarity=0.678 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCCCCC-CCCHHHHHHHHh
Q 002776 680 GDNELQSWWEELRNVGHGDKRDEPWWPE-MQTQAELVQTCT 719 (882)
Q Consensus 680 ~D~ELQaW~~Ei~~~G~gd~kd~~~~P~-l~T~~eLv~~lT 719 (882)
.|.+|++|+.+ ||-.. |+ ..|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~-----~~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPV-----PKSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCC-----CCCCCCHHHHHHHHH
Confidence 46799999987 43222 22 369999998764
No 19
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=23.99 E-value=2.2e+02 Score=33.69 Aligned_cols=114 Identities=25% Similarity=0.297 Sum_probs=73.4
Q ss_pred hHHHHHHhccCCccCchhhcccccccccccchHHHH--------------HhcccCCccccccccchhhHHHHHHH--Hh
Q 002776 547 EPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALAR--------------QILINAGGVLENTVFPAKYAMEMSAV--SY 610 (882)
Q Consensus 547 Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR--------------~~LI~~gGiid~~~~~g~~~~els~~--~y 610 (882)
+-+.+|..+|=|..-=+..||.|--..++.||+.-. ..=|.+=|++.-.-.|+.+.-||-.. -|
T Consensus 91 ~~L~~A~q~qKPds~elad~LkPI~e~i~eI~~fkE~nRkS~~FNhLsav~e~i~algWVav~~tP~p~vke~~daa~FY 170 (480)
T KOG2675|consen 91 AFLWVASQKQKPDSNELADLLKPINEEIGEINNFKEKNRKSPFFNHLSAVSESIPALGWVAVKPTPAPYVKEFKDAAQFY 170 (480)
T ss_pred HHHHHHHhccCCChHHHHHHhhhHHHhhhHHhhhhhcccCchHHHHHHHHHhhcccceeEecCCCCchHHHHHHHHHHHH
Confidence 456778888888888899999999999999987522 22334445555444566665554322 22
Q ss_pred hccccCCCCcchHHhh-cCCCCCCCCCCcccccCCcCCccchhhHHHHHHHHHHHHHHhhhhcCCCccccCChHHHHHHH
Q 002776 611 KNWVFTEQALPADLLK-RGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWE 689 (882)
Q Consensus 611 k~w~f~~~~lP~DL~~-RG~~~~d~~~~~g~~l~l~~YpYrdDgL~iW~AI~~fV~~yv~~YY~~D~~V~~D~ELQaW~~ 689 (882)
.+ .-|+. ||-+ ..-+ +||+.|+.+| .|||++++
T Consensus 171 ~N---------rvLkEyk~~D----------------------~~hv-----eWvKa~l~l~----------~eL~~YVk 204 (480)
T KOG2675|consen 171 TN---------RVLKEYKEKD----------------------PRHV-----EWVKAYLALF----------LELQAYVK 204 (480)
T ss_pred HH---------HHHHHhccCC----------------------hhHH-----HHHHHHHHHH----------HHHHHHHH
Confidence 22 11111 3321 1111 6999999999 68999999
Q ss_pred HHHhccCCCCCCCCCCC
Q 002776 690 ELRNVGHGDKRDEPWWP 706 (882)
Q Consensus 690 Ei~~~G~gd~kd~~~~P 706 (882)
|-.+-|.-..++.+-.|
T Consensus 205 ~hhtTGl~W~~~g~~~~ 221 (480)
T KOG2675|consen 205 EHHTTGLVWNKDGGAAP 221 (480)
T ss_pred HhccccceecCCCCccc
Confidence 99998876655533333
No 20
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=21.60 E-value=1.6e+02 Score=29.79 Aligned_cols=127 Identities=20% Similarity=0.202 Sum_probs=71.5
Q ss_pred ccccCChHHHHHHHHHHhccCCCCCCCCCCC-CCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCCccccCCCC
Q 002776 676 HLIQGDNELQSWWEELRNVGHGDKRDEPWWP-EMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFM 754 (882)
Q Consensus 676 ~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~P-~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~ 754 (882)
+-|.+|++|..+++++.++ .-...+..|.| .+++.++|..++-.||-+|-.... .-.+-..-|+.=|. .+-.||
T Consensus 10 ~lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~AP~~~~--~~~~~glvG~P~na--iLdwpM 84 (141)
T PF12588_consen 10 DLIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTAPEFSD--ANEPVGLVGFPMNA--ILDWPM 84 (141)
T ss_pred HHHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhCCcccc--cCCCCCccccChHH--HHHhhc
Confidence 3467899999999999987 22223334677 799999999999999965433322 00112233442222 222233
Q ss_pred CCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHH--HHHhccCCCCcccccCcCCCCCCCChHHHHHH
Q 002776 755 PEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSL--IEILSRHSTDEVYLGQRDTPEWTLDNEPLAAF 821 (882)
Q Consensus 755 P~kg~~~~~~l~~~~e~~~L~~LP~~~qa~~~m~~--~~lLS~~~~de~yLG~~~~~~~~~d~~~~~a~ 821 (882)
-+ ..+|. .|++ |...+.+..|.- ...|++..+- ..|..-+..-|++ +.+++.+
T Consensus 85 ~T--~sG~a--------~F~~--p~vN~~lK~ILn~W~~fL~sp~S~-~vL~~~~~~GWfs-~~A~~~l 139 (141)
T PF12588_consen 85 GT--PSGYA--------FFLD--PDVNAQLKKILNEWGEFLSSPASR-SVLNTDPPNGWFS-PEALKEL 139 (141)
T ss_pred cC--hHHHH--------HHcC--HHHHHHHHHHHHHHHHHcCChhhh-ccccCCCCCCccC-HHHHHHh
Confidence 32 23442 2222 344455555543 4567765443 3466653457998 5555544
Done!