Query 002782
Match_columns 882
No_of_seqs 1112 out of 4067
Neff 10.8
Searched_HMMs 29240
Date Tue Mar 26 17:43:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002782.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1497-1501//hhsearch_pdb/002782hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 561.7 63.9 572 24-650 620-1248(1249)
2 1nr0_A Actin interacting prote 1.0 1 1 560.4 77.4 584 1-650 1-610 (611)
3 2ymu_A WD-40 repeat protein; u 1.0 1 1 558.1 82.1 556 24-648 21-577 (577)
4 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 539.3 62.6 544 52-654 607-1210(1249)
5 1pgu_A Actin interacting prote 1.0 1 1 527.8 69.0 573 1-652 1-615 (615)
6 2ymu_A WD-40 repeat protein; u 1.0 1 1 525.0 78.8 532 51-650 7-538 (577)
7 1nr0_A Actin interacting prote 1.0 1 1 488.6 70.7 539 59-653 17-569 (611)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 480.0 63.2 588 24-654 22-786 (902)
9 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 459.9 58.8 552 56-654 13-735 (902)
10 1pgu_A Actin interacting prote 1.0 1 1 458.8 62.8 516 58-652 16-573 (615)
No 1
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=561.69 Aligned_cols=572 Identities=20% Similarity=0.294 Sum_probs=500.1
Q ss_pred CEEECCCCCEEEEEECC-EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCC
Q ss_conf 46994699899997389-19999968980456532898639999985899989999689829999889880678751378
Q 002782 24 PLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD 102 (882)
Q Consensus 24 ~ia~s~dg~~la~~~~~-~I~i~d~~~~~~~~~l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~ 102 (882)
+++|+|||+++++++.+ .|.+||+.+++.+..+.+|...|++++|+|++++|++++.|+.|++||+.+++.+..+.+|.
T Consensus 620 ~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 699 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS 699 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCC
T ss_conf 99987999989999488949999989997888760677778999992699989998189959998779993689995899
Q ss_pred CCEEEEEECC--CCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEE
Q ss_conf 7979999969--99899999389939999879993899864499857999991189961999995799099998898837
Q 002782 103 GPAIGMACHP--SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180 (882)
Q Consensus 103 ~~V~~i~fs~--~~~~las~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~ 180 (882)
.+|.+++|+| ++.++++|+.|+.|++||+.++.+...+.+|.+.|.+++|+|++.. +++++.||.|++||+.++..
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~--l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL--LASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE--EEEEESSSEEEEEEGGGTEE
T ss_pred CCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCE--EEEEECCCEEEEEECCCCCC
T ss_conf 7379999840899659999808970999989996342201277797889999259998--99997898599996888865
Q ss_pred EEEECCC-------------CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEEC--CCCEEEEEEECCCCCCCC
Q ss_conf 9883376-------------4266999990699999999579959997058860234313--743065789629999865
Q 002782 181 VATLDKH-------------FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP--TYEMVEAVCAIPPGSAFD 245 (882)
Q Consensus 181 ~~~l~~h-------------~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 245 (882)
...+... ...+.+++|+|++..+++++ ++.+.+|++.+........ ....+..+.+.+++.
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~--- 853 (1249)
T 3sfz_A 778 RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH--- 853 (1249)
T ss_dssp EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT---
T ss_pred CCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCC---
T ss_conf 5302023210246776445650179999978998899975-895999995689723577478777607999827888---
Q ss_pred CCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEC
Q ss_conf 32321000001002466430999973998399997888506640278512210137767651499980699817999708
Q 002782 246 SFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 325 (882)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 325 (882)
.+++++.+|.+++|+..++..... ...+...+..+.++|++..+++++.+
T Consensus 854 --------------------~l~~~~~dg~v~vwd~~~~~~~~~----------~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 854 --------------------LAVIALSQYCVELWNIDSRLKVAD----------CRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp --------------------EEEEECSSSCEEEEETTTTEEEEE----------ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred --------------------EEEEEECCCEEEEEECCCCCEEEE----------CCCCCCCEEEEEECCCCCEEEEEECC
T ss_conf --------------------899994798699998678956532----------27876656899998999989999589
Q ss_pred CEEEEEEECCCCCCCCE------------------------------EEEEEEECCCCCCEEEEEEECCCCCEEEEEECC
Q ss_conf 80899971136631010------------------------------343435235587347878847899689999738
Q 002782 326 QQLLLYTTVEVPEKKME------------------------------LILSKRLVGYNEEILDLKFLGEEEQYLAVATNI 375 (882)
Q Consensus 326 ~~i~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 375 (882)
+.+.+|+.......... .............+.++++.| ++.++++++.+
T Consensus 904 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp-~g~~l~~g~~~ 982 (1249)
T 3sfz_A 904 QTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSP-HLEYVAFGDED 982 (1249)
T ss_dssp SCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECT-TSSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEECC-CCCEEEEECCC
T ss_conf 72898874665201021133103689759986899813776248984476508972567278999958-99779998699
Q ss_pred CCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCC
Q ss_conf 83899969995023563088742489653230499789999636982999948995478654054333899998158981
Q 002782 376 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 455 (882)
Q Consensus 376 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~ 455 (882)
|.+.+|+..++.....+.+|...+.++. ++++++. +++++.||.+++|++.++.... ...|...+.++.+++++
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~--~s~dg~~-l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~-- 1056 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQ--FTADGKT-LISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS-- 1056 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEE--ECSSSSC-EEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS--
T ss_pred CCEEEEECCCCCEEEECCCCCCCEEEEE--ECCCCCE-EEEECCCCEEEEEECCCCCEEE-EECCCCCEEEEEECCCC--
T ss_conf 9889997578723443036777168999--9899998-9998699879999879996689-85278738999990899--
Q ss_pred EEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEEECC
Q ss_conf 99983089908998637999997775432100100102788049998289968999718993899958996169999654
Q 002782 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535 (882)
Q Consensus 456 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~~~~~~~~ 535 (882)
.+++++.|+.+++|++.++. ....+..|...|.+++|+|+++++++++.|+.|++||+.++.....+.+|
T Consensus 1057 ~l~~~~~dg~v~vwd~~~~~----------~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h 1126 (1249)
T 3sfz_A 1057 RLLSWSFDGTVKVWNVITGR----------IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGH 1126 (1249)
T ss_dssp EEEEEESSSEEEEEETTTTC----------CCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCC
T ss_pred CEEEEECCCCEEEEECCCCC----------EEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCC
T ss_conf 58999788968998889886----------55887466884899999899998999849994899878985001255068
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEE---------ECCCCCEEEEEEEECCCEEEEEECCCEEEEEE
Q ss_conf 576689999379989999518980999966999224674---------06767889999985899999964698099997
Q 002782 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF---------EGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606 (882)
Q Consensus 536 ~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---------~~h~~~v~~~~~s~~g~~l~s~~~dg~i~iwd 606 (882)
...|++++|+|+++++++++.||.|++||+.+++++..+ .+|.+.|++++|+|+|.++++++ |.|++||
T Consensus 1127 ~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd 1204 (1249)
T 3sfz_A 1127 NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWN 1204 (1249)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBC
T ss_pred CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECC--CEEEEEE
T ss_conf 77679999979999899982899799998899945788514444421025674289999978999899779--8599989
Q ss_pred CCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 68881677722577746899992799799997289979999879
Q 002782 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650 (882)
Q Consensus 607 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw~~~ 650 (882)
+.+++++..+..|...|++++|+|++.++++++.||.+.+|++.
T Consensus 1205 ~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1205 VATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp SSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred CCCCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEEEEEC
T ss_conf 88895004640047753279997898779996688179997643
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=560.39 Aligned_cols=584 Identities=18% Similarity=0.220 Sum_probs=482.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 99984453334353001300387469946998999973891999996898045653289863999998589998999968
Q 002782 1 MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGH 80 (882)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~y~g~~ia~s~dg~~la~~~~~~I~i~d~~~~~~~~~l~~~~~~I~~l~~spdg~~las~~~ 80 (882)
|..+.+++.|++.+..++.- ..+++|+|||++|+++.++.|.+|++.+++....+.+|...|++++|+|+|++||+|+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~-~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~ 79 (611)
T 1nr0_A 1 MSEFSQTALFPSLPRTARGT-AVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 79 (611)
T ss_dssp -CCCEEEEEECCCCCCCTTC-CCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCCCCEECCCCCCCCCC-EEEEEECCCCCEEEECCCCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 97211162798999740682-36976679999799679997999457872427376589986599999999968999948
Q ss_pred CCCEEEEECCCC--EEEEEEECCCCCEEEEEECCCCCEEEEEECC----CCEEEEECCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 982999988988--0678751378797999996999899999389----9399998799938998644998579999911
Q 002782 81 SREIRVWDLSTL--KCLRSWKGHDGPAIGMACHPSGGLLATAGAD----RKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154 (882)
Q Consensus 81 dg~i~iwd~~~~--~~~~~~~~h~~~V~~i~fs~~~~~las~~~d----g~i~vwd~~~~~~~~~~~~h~~~v~~i~f~~ 154 (882)
|+.|++||+.++ .....+.+|.++|.+++|+|++++|++++.+ +.|++|| .+.....+.+|...|.+++|+|
T Consensus 80 d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p 157 (611)
T 1nr0_A 80 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKP 157 (611)
T ss_dssp TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECS
T ss_pred CCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEE--CCCCCCEECCCCCCCEEEEECC
T ss_conf 99789948989841566762255784489998999997999989977366999963--8997632547889836999889
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEE--------
Q ss_conf 899619999957990999988988379883376426699999069999999957995999705886023431--------
Q 002782 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV-------- 226 (882)
Q Consensus 155 ~~~~~~l~sg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------- 226 (882)
++. ..+++++.|+.|++||..++++..++.+|...|.+++|+|++++|++++.|+.|++|++.+++....+
T Consensus 158 ~~~-~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 158 SRP-FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 236 (611)
T ss_dssp SSS-CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSC
T ss_pred CCC-EEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCC
T ss_conf 998-2999992898099997999757665200257169999979999899998999199988999828665136643235
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCC
Q ss_conf 37430657896299998653232100000100246643099997399839999788850664027851221013776765
Q 002782 227 PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRG 306 (882)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (882)
.+...+.++.+.|++. .+++++.|+.+++|+..++......... ......
T Consensus 237 ~h~~~V~~v~~spdg~-----------------------~l~s~s~D~~v~lWd~~~~~~~~~~~~~-------~~~~~~ 286 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGT-----------------------KIASASADKTIKIWNVATLKVEKTIPVG-------TRIEDQ 286 (611)
T ss_dssp SSSSCEEEEEECTTSS-----------------------EEEEEETTSEEEEEETTTTEEEEEEECC-------SSGGGC
T ss_pred CCCCCEEEEEECCCCC-----------------------EEEEEECCCEEEEEECCCCCEEEEECCC-------CCCCCE
T ss_conf 6678789999979999-----------------------9999908980999968887013440478-------876640
Q ss_pred EEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 14999806998179997088089997113663101034343523558734787884789968999973883899969995
Q 002782 307 FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSM 386 (882)
Q Consensus 307 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~i~d~~~~ 386 (882)
.....+ ++..++.++.++.+.+|+.... .....+.+|...+.+++|.| ++.++++++.|+.|++||+.++
T Consensus 287 ~~~~~~--~~~~l~s~s~d~~i~~~~~~~~-------~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 287 QLGIIW--TKQALVSISANGFINFVNPELG-------SIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEEEEE--CSSCEEEEETTCCEEEEETTTT-------EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEE--CCCEEEEEECCCCEEEEECCCC-------CCCEEECCCCCCEEEEEEEC-CCCEEEEEECCCCEEEEECCCC
T ss_conf 689997--3887999958996899968899-------74469837888889999918-9998999958984999978879
Q ss_pred EEEEEE-ECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEE---EECCCCCEEEEEECCCCCCEEEEEEC
Q ss_conf 023563-08874248965323049978999963698299994899547865---40543338999981589819998308
Q 002782 387 SCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV---GTGHMGAVGAVAFSKKLQNFLVSGSS 462 (882)
Q Consensus 387 ~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~i~~s~~~~~~l~s~~~ 462 (882)
.....+ .+|...+.++. +++++ . +++++.|+.+++|+......... ..........++++|++.. ++++ .
T Consensus 357 ~~~~~~~~~h~~~v~~~~--~s~~~-~-l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-~~~~-~ 430 (611)
T 1nr0_A 357 ISNRVFPDVHATMITGIK--TTSKG-D-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI-AVAA-C 430 (611)
T ss_dssp CEEECSSCSCSSCEEEEE--ECTTS-C-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC-EEEE-E
T ss_pred CEEEECCCCCCCEEEEEE--ECCCC-C-EEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCE-EEEE-E
T ss_conf 256321667765078999--87899-6-999984896689546885435652120014899707998079969-9999-6
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEE--EEEEECCCCCEE
Q ss_conf 990899863799999777543210010010278804999828996899971899389995899616--999965457668
Q 002782 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGIW 540 (882)
Q Consensus 463 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~--~~~~~~~~~~v~ 540 (882)
++.+++|+.. .... ..|...+.+++|+|+++++++|+.|++|++|++.+... ... .+|...|+
T Consensus 431 ~~~v~~~~~~-------------~~~~-~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~ 495 (611)
T 1nr0_A 431 YKHIAIYSHG-------------KLTE-VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEIT 495 (611)
T ss_dssp SSEEEEEETT-------------EEEE-EECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEE
T ss_pred CCEEEEEECC-------------CEEE-EECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEC-CCCCCCEE
T ss_conf 7639998489-------------4346-4068895499992899899996899739999945992224101-57788607
Q ss_pred EEEECCCCCEEEEEECCCCEEEEECCC-CCEEEE--EECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCCCE-EE-EE
Q ss_conf 999937998999951898099996699-922467--40676788999998589999996469809999768881-67-77
Q 002782 541 SVEFSPVDQVVITASGDKTIKIWSISD-GSCLKT--FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE-CI-AT 615 (882)
Q Consensus 541 ~i~~s~~~~~l~s~~~d~~i~iwd~~~-~~~~~~--~~~h~~~v~~~~~s~~g~~l~s~~~dg~i~iwd~~~~~-~~-~~ 615 (882)
+++|+|++++|++++.|++|++|++.+ ++++.. +.+|...|.+++|+|+|++|++++.|+.|++|++.++. +. ..
T Consensus 496 ~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~ 575 (611)
T 1nr0_A 496 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIII 575 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEE
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHH
T ss_conf 99998999989999489989998857787223210264046642589989989979999799729999788755563264
Q ss_pred ECCC-CCCEEEEEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 2257-7746899992799799997289979999879
Q 002782 616 YDKH-EDKIWALAVGKKTEMFATGGSDALVNLWHDS 650 (882)
Q Consensus 616 ~~~h-~~~v~~l~~s~~~~~l~s~~~dg~i~iw~~~ 650 (882)
+.+| ...|++++|+|++. |++++.|+.|++|++.
T Consensus 576 ~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 576 KGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred HCCCCCCCEEEEEECCCCE-EEEECCCCCEEEEECC
T ss_conf 4467656711899858997-9995288778998444
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=558.09 Aligned_cols=556 Identities=28% Similarity=0.503 Sum_probs=490.2
Q ss_pred CEEECCCCCEEEEEECC-EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCC
Q ss_conf 46994699899997389-19999968980456532898639999985899989999689829999889880678751378
Q 002782 24 PLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD 102 (882)
Q Consensus 24 ~ia~s~dg~~la~~~~~-~I~i~d~~~~~~~~~l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~ 102 (882)
+++|||||++||+++.+ .|+|||. +++.++++.+|...|++++|+||+++||+++.|+.|++||. +++++..+.+|.
T Consensus 21 ~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~ 98 (577)
T 2ymu_A 21 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 98 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCS
T ss_pred EEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCC
T ss_conf 9999899899999938998999979-99789999689899899999899999999969897999989-997899997899
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEE
Q ss_conf 79799999699989999938993999987999389986449985799999118996199999579909999889883798
Q 002782 103 GPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182 (882)
Q Consensus 103 ~~V~~i~fs~~~~~las~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~~~ 182 (882)
.+|.+++|+|++++|++++.|+.+++|+..... .....++...+..+.++|++.. +++++.++.+++|+.. .....
T Consensus 99 ~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~ 174 (577)
T 2ymu_A 99 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTLTGHSSSVWGVAFSPDGQT--IASASDDKTVKLWNRN-GQLLQ 174 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCCE-EEEECCCSSCEEEEEECTTSSC--EEEEETTSEEEEECTT-SCEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCCEEECCCCCCE-EEECCCCCCCEEEEEEECCCCC--CEECCCCCCEECCCCC-EEEEE
T ss_conf 988999998999989998079833520235520-0110477774355542037763--2002555310000000-00000
Q ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 83376426699999069999999957995999705886023431374306578962999986532321000001002466
Q 002782 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRS 262 (882)
Q Consensus 183 ~l~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (882)
....|...+.++.++|++.++++++.|+.|++|+...............+.++.+.+++.
T Consensus 175 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~-------------------- 234 (577)
T 2ymu_A 175 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQ-------------------- 234 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSS--------------------
T ss_pred ECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCC--------------------
T ss_conf 026877635665416997789998599989999499968999946889889999979999--------------------
Q ss_pred CCEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCE
Q ss_conf 43099997399839999788850664027851221013776765149998069981799970880899971136631010
Q 002782 263 LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKME 342 (882)
Q Consensus 263 ~~~~~~~~~~~g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 342 (882)
.+++++.++.+++|+.....+.. ...+...+..+.+.|++..+++++.++.+.+|+...
T Consensus 235 ---~l~~~~~d~~i~~w~~~~~~~~~-----------~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~------- 293 (577)
T 2ymu_A 235 ---TIASASDDKTVKLWNRNGQLLQT-----------LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG------- 293 (577)
T ss_dssp ---CEEEEETTSCEEEECTTSCEEEE-----------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-------
T ss_pred ---EEEEEECCCEEEEEECCCCEEEE-----------EECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-------
T ss_conf ---99999189989999599979999-----------806889879999968999999995999799994899-------
Q ss_pred EEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCE
Q ss_conf 34343523558734787884789968999973883899969995023563088742489653230499789999636982
Q 002782 343 LILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422 (882)
Q Consensus 343 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 422 (882)
.....+.+|...+.+++|.| ++..+++++.++.+++|+..... ...+.+|...+.+++ ++|++.. +++++.|+.
T Consensus 294 -~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~~~~v~~~~--~s~~g~~-l~~~~~dg~ 367 (577)
T 2ymu_A 294 -QLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQH-LQTLTGHSSSVWGVA--FSPDGQT-IASASDDKT 367 (577)
T ss_dssp -CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEE--ECTTSSE-EEEEETTSE
T ss_pred -CEEEEEECCCCCEEEEEECC-CCCEEEEEECCCEEEEEECCCCE-EEEEECCCCCEEEEE--ECCCCCE-EEEEECCCE
T ss_conf -58999706889769999999-99999999699959999699972-578747889779999--9899999-999969998
Q ss_pred EEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
Q ss_conf 99994899547865405433389999815898199983089908998637999997775432100100102788049998
Q 002782 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 502 (882)
Q Consensus 423 i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (882)
+++|+. ++..+..+..|...|.+++|+|++. ++++++.|+.|++|+.... ....+..|...|++++|
T Consensus 368 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~~-----------~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 368 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ-----------LLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEEEET-TCCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTCC-----------EEEEEECCSSCEEEEEE
T ss_pred EEEECC-CCCEEEEECCCCCCEEEEEECCCCC-EEEEEECCCEEEEEECCCC-----------EEEEECCCCCCEEEEEE
T ss_conf 999908-9978998527889748999989999-9999949998999969997-----------89896288997579999
Q ss_pred CCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 28996899971899389995899616999965457668999937998999951898099996699922467406767889
Q 002782 503 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582 (882)
Q Consensus 503 s~~~~~la~~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~ 582 (882)
+|+++++++++.|+.|++|+. +++.+..+.+|...|++++|+|++++|++++.|+.|++|+. +++++..+.+|...|+
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR 512 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred CCCCCEEEEECCCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECC-CCCEEEEEECCCCCEE
T ss_conf 899999999939998999979-99889997278997789999699999999919897999939-9978999867999989
Q ss_pred EEEEEECCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 999985899999964698099997688816777225777468999927997999972899799998
Q 002782 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648 (882)
Q Consensus 583 ~~~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw~ 648 (882)
+++|+|++++|++++.||.|++||. +++++..+.+|.+.|++++|+||+++|+|++.|+.|++|+
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 9999189999999989699999969-9978989718888878999968999999990899999969
No 4
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=539.31 Aligned_cols=544 Identities=20% Similarity=0.318 Sum_probs=472.1
Q ss_pred EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 45653289863999998589998999968982999988988067875137879799999699989999938993999987
Q 002782 52 IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131 (882)
Q Consensus 52 ~~~~l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~i~fs~~~~~las~~~dg~i~vwd~ 131 (882)
....+.+|.+.|++++|+|+++++|+|+.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
T ss_conf 22787166664899998799998999948894999998999788876067777899999269998999818995999877
Q ss_pred CCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCE
Q ss_conf 99938998644998579999911899619999957990999988988379883376426699999069999999957995
Q 002782 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211 (882)
Q Consensus 132 ~~~~~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s~~~~~l~s~~~dg~ 211 (882)
.++.++..+.+|...|.+++|+|+++..++++++.||.|++||+.+++++..+.+|.+.|++++|+|++.++++++.||.
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred CCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCE
T ss_conf 99936899958997379999840899659999808970999989996342201277797889999259998999978985
Q ss_pred EEEEECCCCEEEEEECCCC--------------EEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEE
Q ss_conf 9997058860234313743--------------06578962999986532321000001002466430999973998399
Q 002782 212 VNLWDLRDYSCKLTVPTYE--------------MVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVR 277 (882)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 277 (882)
|++|++.+......+.... .+.++.+.+++. .++++ .++.+.
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~-----------------------~l~~~-~~~~v~ 822 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD-----------------------KIIVA-AKNKVL 822 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS-----------------------EEEEE-ETTEEE
T ss_pred EEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC-----------------------EEEEE-CCCCEE
T ss_conf 999968888655302023210246776445650179999978998-----------------------89997-589599
Q ss_pred EEECCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCEE
Q ss_conf 99788850664027851221013776765149998069981799970880899971136631010343435235587347
Q 002782 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEIL 357 (882)
Q Consensus 278 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 357 (882)
+|+..++...... ...+...+..+.++|++..+++++.++.+.+|+.... .......+|...+.
T Consensus 823 ~~d~~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-------~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 823 LFDIHTSGLLAEI---------HTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-------LKVADCRGHLSWVH 886 (1249)
T ss_dssp EEETTTCCEEEEE---------ECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-------EEEEEECCCSSCEE
T ss_pred EEEECCCCCEEEE---------CCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC-------CEEEECCCCCCCEE
T ss_conf 9995689723577---------4787776079998278888999947986999986789-------56532278766568
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCEE-----------------------------EE--------EEECCCCCEE
Q ss_conf 8788478996899997388389996999502-----------------------------35--------6308874248
Q 002782 358 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSC-----------------------------SY--------VLAGHSEIVL 400 (882)
Q Consensus 358 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~-----------------------------~~--------~~~~~~~~v~ 400 (882)
++.|.+ ++..+++++.++.+++|+..+... .. ....+...+.
T Consensus 887 ~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 887 GVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEECC-CCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEE
T ss_conf 999989-9998999958972898874665201021133103689759986899813776248984476508972567278
Q ss_pred EEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 96532304997899996369829999489954786540543338999981589819998308990899863799999777
Q 002782 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480 (882)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 480 (882)
++. ++|++.. +++|+.+|.+++|+..++.....+.+|...|.+++|+|++. ++++++.|+.|++|++.+..
T Consensus 966 ~~~--~sp~g~~-l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i~vwd~~~~~----- 1036 (1249)
T 3sfz_A 966 CCC--LSPHLEY-VAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVIQVWNWQTGD----- 1036 (1249)
T ss_dssp EEE--ECTTSSE-EEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBEEEEETTTTE-----
T ss_pred EEE--ECCCCCE-EEEECCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCC-EEEEECCCCEEEEEECCCCC-----
T ss_conf 999--9589977-99986999889997578723443036777168999989999-89998699879999879996-----
Q ss_pred CCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCE
Q ss_conf 54321001001027880499982899689997189938999589961699996545766899993799899995189809
Q 002782 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 560 (882)
Q Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i 560 (882)
......|...+.++.++|++ .+++++.|+.+++||+.+++....+.+|...|++++|+|+++++++++.|+.|
T Consensus 1037 ------~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v 1109 (1249)
T 3sfz_A 1037 ------YVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA 1109 (1249)
T ss_dssp ------EECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCC
T ss_pred ------EEEEECCCCCEEEEEECCCC-CEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf ------68985278738999990899-58999788968998889886558874668848999998999989998499948
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCCCEEEEEE---------CCCCCCEEEEEECCC
Q ss_conf 99966999224674067678899999858999999646980999976888167772---------257774689999279
Q 002782 561 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---------DKHEDKIWALAVGKK 631 (882)
Q Consensus 561 ~iwd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~l~~s~~ 631 (882)
++||+.++.++..+.+|...|++++|+|+|.+|++++.||.|++||+.+++++..+ ..|.+.|++++|+|+
T Consensus 1110 ~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~d 1189 (1249)
T 3sfz_A 1110 KIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD 1189 (1249)
T ss_dssp CEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTT
T ss_pred EEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 99878985001255068776799999799998999828997999988999457885144444210256742899999789
Q ss_pred CCEEEEEECCCCEEEEECCCHHH
Q ss_conf 97999972899799998797787
Q 002782 632 TEMFATGGSDALVNLWHDSTAAE 654 (882)
Q Consensus 632 ~~~l~s~~~dg~i~iw~~~~~~~ 654 (882)
+.++++++ |.+++|+..++..
T Consensus 1190 g~~l~s~~--g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1190 SKTLVSAG--GYLKWWNVATGDS 1210 (1249)
T ss_dssp SSCEEEES--SSEEEBCSSSCBC
T ss_pred CCEEEECC--CEEEEEECCCCCE
T ss_conf 99899779--8599989888950
No 5
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=527.81 Aligned_cols=573 Identities=17% Similarity=0.216 Sum_probs=490.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCC----CEEEEECCCCCC-EEEEEECC--CCC
Q ss_conf 99984453334353001300387469946998999973891999996898----045653289863-99999858--999
Q 002782 1 MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNA----SIKSTIEGGSDT-ITALALSP--DDK 73 (882)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~y~g~~ia~s~dg~~la~~~~~~I~i~d~~~~----~~~~~l~~~~~~-I~~l~~sp--dg~ 73 (882)
|.+..+++.|++.+...+ -...+++|+|||+++++++++.|.+||+.++ +....+.+|... |++++|+| +++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~ 79 (615)
T 1pgu_A 1 MSSISLKEIIPPQPSTQR-NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ 79 (615)
T ss_dssp -CCEEEEEEECCCCCCCT-TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC
T ss_pred CCCCCHHHCCCCCCCCCC-CCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCC
T ss_conf 972235231599987765-8536899889999799935984999977788776514318805788449999979678998
Q ss_pred EEEEEECCCCEEEEECCCC--------EEEEEEECCCCCEEEEEECCCCCEEEEEECC----CCEEEEECCCCEEEEEEE
Q ss_conf 8999968982999988988--------0678751378797999996999899999389----939999879993899864
Q 002782 74 LLFSSGHSREIRVWDLSTL--------KCLRSWKGHDGPAIGMACHPSGGLLATAGAD----RKVLVWDVDGGFCTHYFK 141 (882)
Q Consensus 74 ~las~~~dg~i~iwd~~~~--------~~~~~~~~h~~~V~~i~fs~~~~~las~~~d----g~i~vwd~~~~~~~~~~~ 141 (882)
+|++++.||.|++||+.++ ..+..+..|..+|.+++|+|++++|++++.+ +.|.+|| .+.....+.
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~ 157 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS 157 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEE--CCCCCEEEE
T ss_conf 899964898799976888765544554200011125663799999079998999316877755799997--898103130
Q ss_pred CCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCC---CEEEEEECCC-CCEEEEEECCCEEEEEEC
Q ss_conf 499857999991189961999995799099998898837988337642---6699999069-999999957995999705
Q 002782 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS---RVTSMAITSD-GSTLISAGRDKVVNLWDL 217 (882)
Q Consensus 142 ~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~~~~l~~h~~---~v~~l~~s~~-~~~l~s~~~dg~i~iwd~ 217 (882)
+|...|.+++|+|++. .++++++.|+.|++||+.+++++..+.+|.. .|.+++|+|+ ++++++++.|+.|++|++
T Consensus 158 ~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 158 GHSQRINACHLKQSRP-MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp SCSSCEEEEEECSSSS-CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred CCCCCEEEEEECCCCC-CEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEC
T ss_conf 6774388999887899-689999579959999699961013202567777428999978977888999868980899989
Q ss_pred CCCEEEEEE-----CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCC
Q ss_conf 886023431-----374306578962999986532321000001002466430999973998399997888506640278
Q 002782 218 RDYSCKLTV-----PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSS 292 (882)
Q Consensus 218 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~w~~~~~~~~~~~~~ 292 (882)
.+++....+ .....+..+.+. ++. .+++++.+|.+++|+..++........
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-----------------------~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQ-----------------------KFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEES-SSS-----------------------EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCCCCCEEEEEEC-CCC-----------------------EEEEECCCCCEEEEECCCCCEEEEECC
T ss_conf 99978589525444567755899981-899-----------------------799984899489997888927878847
Q ss_pred CEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 51221013776765149998069981799970880899971136631010343435235587347878847899689999
Q 002782 293 DVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVA 372 (882)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 372 (882)
. .......+..+.+ +++..+++++.++.+.+|+... ......+.+|...+.++.| ++ ++++
T Consensus 293 ~------~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~-~~----l~~~ 353 (615)
T 1pgu_A 293 D------KQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGH-------DEVLKTISGHNKGITALTV-NP----LISG 353 (615)
T ss_dssp C------TTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTE-------EEEEEEECCCSSCEEEEET-TT----TEEE
T ss_pred C------CCCCCCCEEEEEE-CCCCEEEEEECCCCEEEEECCC-------CCEEEEEECCCCCEEEEEE-CC----CEEE
T ss_conf 8------7754571469991-8997699997899789998889-------9288999477787899995-67----4898
Q ss_pred ECCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC
Q ss_conf 73883899969995023563088742489653230499789999636982999948995478654054333899998158
Q 002782 373 TNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 452 (882)
Q Consensus 373 ~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~ 452 (882)
+.++.+++|++. ... .+|...+.++. + +++.. +++++.|+.+++|++.++.... .+.+++++|+
T Consensus 354 ~~dg~i~~w~~~---~~~--~~~~~~v~~~~--~-~~~~~-l~~~~~d~~i~~~~~~~~~~~~-------~~~~~~~s~~ 417 (615)
T 1pgu_A 354 SYDGRIMEWSSS---SMH--QDHSNLIVSLD--N-SKAQE-YSSISWDDTLKVNGITKHEFGS-------QPKVASANND 417 (615)
T ss_dssp ETTSCEEETTTT---EEE--CCCCSCEEEEE--C-CSTTC-CEEEETTTEEEETTEEEEECSS-------CEEEEEECSS
T ss_pred CCCCEEEEEECH---HHC--CCCCCCEEEEE--E-CCCCE-EEEEECCCCEEEEECCCCCCCC-------CCEEEEECCC
T ss_conf 799959998752---415--75568517999--7-89867-9999589979998866676367-------8469998289
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECC-CCCEEEEECCCCEEE-E
Q ss_conf 98199983089908998637999997775432100100102788049998289968999718-993899958996169-9
Q 002782 453 LQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ-DRTACVWRLPDLVSV-V 530 (882)
Q Consensus 453 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~-dg~i~iwd~~~~~~~-~ 530 (882)
+. +++++ .++.+.+|+..... .... ..+...+.+++++ ++++++++. |+.|++|++.++... .
T Consensus 418 ~~-~~~~~-~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~ 482 (615)
T 1pgu_A 418 GF-TAVLT-NDDDLLILQSFTGD----------IIKS-VRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFD 482 (615)
T ss_dssp SE-EEEEE-TTSEEEEEETTTCC----------EEEE-EECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEE
T ss_pred CC-EEEEE-CCCCEEEEECCCCC----------EEEE-CCCCCCCEEEEEC--CCEEEEEECCCCEEEEEECCCCCCCCC
T ss_conf 87-89996-79826999446786----------6555-1567872077883--888999656898699998888543533
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCCEEEEEEEE----------CCCEEEEEECC
Q ss_conf 9965457668999937998999951898099996699922467406-767889999985----------89999996469
Q 002782 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG-HTSSVLRASFLT----------RGAQIVSCGAD 599 (882)
Q Consensus 531 ~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~s~----------~g~~l~s~~~d 599 (882)
.+.+|...|++++|+|++++|++++.|+.|++|++.+++++..+.+ |...|++++|+| ++.+|++++.|
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred CCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf 36776575079999899998998179985998657777624676047887146999768323453324688889998179
Q ss_pred CEEEEEECCCC-EEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCH
Q ss_conf 80999976888-167772257774689999279979999728997999987977
Q 002782 600 GLVKLWTVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTA 652 (882)
Q Consensus 600 g~i~iwd~~~~-~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw~~~~~ 652 (882)
|.|++|++.++ +++..+.+|...|++++|+|++. |++++.||.|++|++.++
T Consensus 563 g~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 563 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred CCEEEEECCCCCEECHHHHCCCCCEEEEEECCCCC-EEEECCCCEEEEEEEECC
T ss_conf 71999977888540311335943058999738997-288459963999960159
No 6
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=524.98 Aligned_cols=532 Identities=28% Similarity=0.495 Sum_probs=470.6
Q ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 04565328986399999858999899996898299998898806787513787979999969998999993899399998
Q 002782 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130 (882)
Q Consensus 51 ~~~~~l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~i~fs~~~~~las~~~dg~i~vwd 130 (882)
+..+.|+||.+.|++++|||||++||+++.|+.|++||. ++++++++.+|..+|.+++|+|++++||+++.|+.|++||
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 894398789985799999899899999938998999979-9978999968989989999989999999996989799998
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 79993899864499857999991189961999995799099998898837988337642669999906999999995799
Q 002782 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210 (882)
Q Consensus 131 ~~~~~~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~~~~l~~h~~~v~~l~~s~~~~~l~s~~~dg 210 (882)
. ++.++..+.+|...|.+++|+|++.. +++++.|+.+++|+... ........+...+..+.++|++..+++++.++
T Consensus 86 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~--l~~~~~d~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 161 (577)
T 2ymu_A 86 R-NGQLLQTLTGHSSSVRGVAFSPDGQT--IASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIASASDDK 161 (577)
T ss_dssp T-TSCEEEEECCCSSCEEEEEECTTSSE--EEEEETTSCEEEEETTC-CEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred C-CCCEEEEEECCCCCEEEEEECCCCCE--EEEECCCCCEEECCCCC-CEEEECCCCCCCEEEEEEECCCCCCEECCCCC
T ss_conf 9-99789999789998899999899998--99980798335202355-20011047777435554203776320025553
Q ss_pred EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEC
Q ss_conf 59997058860234313743065789629999865323210000010024664309999739983999978885066402
Q 002782 211 VVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQK 290 (882)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~w~~~~~~~~~~~ 290 (882)
.+++|+...............+..+.+.+++. .+++++.+|.+++|+.....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------------------~l~~~~~d~~v~~w~~~~~~~~~~- 217 (577)
T 2ymu_A 162 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ-----------------------TIASASDDKTVKLWNRNGQLLQTL- 217 (577)
T ss_dssp EEEEECTTSCEEEEEECCSSCEEEEEECTTSS-----------------------CEEEEETTSEEEEECTTSCEEEEE-
T ss_pred CEECCCCCEEEEEECCCCCCCEEEEEECCCCC-----------------------EEEEECCCCEEEEEECCCCEEEEE-
T ss_conf 10000000000000268776356654169977-----------------------899985999899994999689999-
Q ss_pred CCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEE
Q ss_conf 78512210137767651499980699817999708808999711366310103434352355873478788478996899
Q 002782 291 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 370 (882)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 370 (882)
..+...+..+.+.|++..+++++.++.+.+|+... .....+.+|...+.++.|.| ++..++
T Consensus 218 ----------~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~--------~~~~~~~~~~~~v~~v~~~~-d~~~l~ 278 (577)
T 2ymu_A 218 ----------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVNGVAFRP-DGQTIA 278 (577)
T ss_dssp ----------ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS--------CEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred ----------ECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC--------CEEEEEECCCCCEEEEEECC-CCCEEE
T ss_conf ----------46889889999979999999991899899995999--------79999806889879999968-999999
Q ss_pred EEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEC
Q ss_conf 99738838999699950235630887424896532304997899996369829999489954786540543338999981
Q 002782 371 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450 (882)
Q Consensus 371 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s 450 (882)
+++.++.+++|+.. +.....+.+|...+.+++ ++|++.. +++++.|+.+++|+.... .+..+..|...+.+++|+
T Consensus 279 ~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~--~~~~~~~-l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 279 SASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVA--FSPDGQT-IASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFS 353 (577)
T ss_dssp EEETTSCEEEEETT-SCEEEEECCCSSCEEEEE--ECTTSSE-EEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEEC
T ss_pred EEECCCEEEEEECC-CCEEEEEECCCCCEEEEE--ECCCCCE-EEEEECCCEEEEEECCCC-EEEEEECCCCCEEEEEEC
T ss_conf 99599979999489-958999706889769999--9999999-999969995999969997-257874788977999998
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEE
Q ss_conf 58981999830899089986379999977754321001001027880499982899689997189938999589961699
Q 002782 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530 (882)
Q Consensus 451 ~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~~~ 530 (882)
|++. ++++++.|+.+++|+.... .......|...|++++|+|+++++++++.|+.|++|+. +++.+.
T Consensus 354 ~~g~-~l~~~~~dg~v~~~~~~~~-----------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~ 420 (577)
T 2ymu_A 354 PDGQ-TIASASDDKTVKLWNRNGQ-----------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ 420 (577)
T ss_dssp TTSS-EEEEEETTSEEEEEETTCC-----------EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEE
T ss_pred CCCC-EEEEEECCCEEEEECCCCC-----------EEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEE
T ss_conf 9999-9999969998999908997-----------89985278897489999899999999949998999969-997898
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCCC
Q ss_conf 99654576689999379989999518980999966999224674067678899999858999999646980999976888
Q 002782 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610 (882)
Q Consensus 531 ~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~dg~i~iwd~~~~ 610 (882)
.+.+|...|++++|+|++++|++++.|+.|++|+. +++++..+.+|...|.+++|+|++++|++++.|+.|++|+. ++
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~ 498 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 498 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred EECCCCCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECC-CC
T ss_conf 96288997579999899999999939998999979-99889997278997789999699999999919897999939-99
Q ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 1677722577746899992799799997289979999879
Q 002782 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650 (882)
Q Consensus 611 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw~~~ 650 (882)
+++..+.+|...|.+++|+|++++|++++.||.|++|+..
T Consensus 499 ~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 7899986799998999991899999999896999999699
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=488.60 Aligned_cols=539 Identities=17% Similarity=0.219 Sum_probs=377.5
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC--EE
Q ss_conf 9863999998589998999968982999988988067875137879799999699989999938993999987999--38
Q 002782 59 GSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--FC 136 (882)
Q Consensus 59 ~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~i~fs~~~~~las~~~dg~i~vwd~~~~--~~ 136 (882)
+.+.+.+++|+|||++||+++ ++.|++|++.++.....+.+|...|++++|+|+|++||+|+.|+.|++||+.++ ..
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~ 95 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 95 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred CCCCEEEEEECCCCCEEEECC-CCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEE
T ss_conf 068236976679999799679-9979994578724273765899865999999999689999489978994898984156
Q ss_pred EEEEECCCCCEEEEEEECCCCCCEEEEEECC----CCEEEEECCCCEEEEEECCCCCCEEEEEECCCCC-EEEEEECCCE
Q ss_conf 9986449985799999118996199999579----9099998898837988337642669999906999-9999957995
Q 002782 137 THYFKGHKGVVSSILFHPDTDKSLLFSGSDD----ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS-TLISAGRDKV 211 (882)
Q Consensus 137 ~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~d----g~I~iwd~~~~~~~~~l~~h~~~v~~l~~s~~~~-~l~s~~~dg~ 211 (882)
...+.+|.+.|.+++|+|++.. +++++.+ +.|++|| .+.+...+.+|...|.+++|+|++. .|++++.|+.
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~--l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKR--IAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCE--EEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred EEEECCCCCCEEEEEECCCCCE--EEEEECCCCCEEEEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCE
T ss_conf 6762255784489998999997--999989977366999963--899763254788983699988999829999928980
Q ss_pred EEEEECCCCEEEEEECC-CCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEC
Q ss_conf 99970588602343137-43065789629999865323210000010024664309999739983999978885066402
Q 002782 212 VNLWDLRDYSCKLTVPT-YEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQK 290 (882)
Q Consensus 212 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~w~~~~~~~~~~~ 290 (882)
|++|+....+....+.. ...+.++.+.|++. .+++++.|+.+++|+..++......
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-----------------------~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-----------------------LFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSS-----------------------EEEEEETTSCEEEEETTTCCEEEEC
T ss_pred EEEEECCCCEEEEEECCCCCCEEEEEECCCCC-----------------------EEEEEECCCCEEEEECCCCCEEEEE
T ss_conf 99997999757665200257169999979999-----------------------8999989991999889998286651
Q ss_pred CCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEE
Q ss_conf 78512210137767651499980699817999708808999711366310103434352355873478788478996899
Q 002782 291 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 370 (882)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 370 (882)
... ......+...+..+.++|++..++.++.|+.+.+|+....... ........+......+.+ ++..++
T Consensus 229 ~~~---~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~l~ 298 (611)
T 1nr0_A 229 EDD---SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE----KTIPVGTRIEDQQLGIIW---TKQALV 298 (611)
T ss_dssp BCT---TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----EEEECCSSGGGCEEEEEE---CSSCEE
T ss_pred CCC---CCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE----EEECCCCCCCCEEEEEEE---CCCEEE
T ss_conf 366---4323566787899999799999999908980999968887013----440478876640689997---388799
Q ss_pred EEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEE-ECCCCCEEEEEE
Q ss_conf 9973883899969995023563088742489653230499789999636982999948995478654-054333899998
Q 002782 371 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG-TGHMGAVGAVAF 449 (882)
Q Consensus 371 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~i~~ 449 (882)
+++.++.+++|+...+.....+.+|...+.+++ ++|+++. +++++.|+.|++||+.++.....+ ..|...+.+++|
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~--~spdg~~-l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALS--SSADGKT-LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEE--ECTTSSE-EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEECCCCEEEEECCCCCCCEEECCCCCCEEEEE--EECCCCE-EEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEE
T ss_conf 995899689996889974469837888889999--9189998-9999589849999788792563216677650789998
Q ss_pred CCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEE
Q ss_conf 15898199983089908998637999997775432100100102788049998289968999718993899958996169
Q 002782 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529 (882)
Q Consensus 450 s~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~~ 529 (882)
++++ .+++++.|+.+++|+.......... ...........+++++|++..++++ .++.+++|+. +. .
T Consensus 376 s~~~--~l~s~s~d~~v~~w~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~dg~~~~~~-~~~~v~~~~~--~~-~ 442 (611)
T 1nr0_A 376 TSKG--DLFTVSWDDHLKVVPAGGSGVDSSK-------AVANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSH--GK-L 442 (611)
T ss_dssp CTTS--CEEEEETTTEEEEECSSSSSSCTTS-------CCEEECSSCEEEEEECTTSSCEEEE-ESSEEEEEET--TE-E
T ss_pred CCCC--CEEEEECCCCEEEEECCCCCCCCCC-------EEEEECCCCCCEEEEECCCCEEEEE-ECCEEEEEEC--CC-E
T ss_conf 7899--6999984896689546885435652-------1200148997079980799699999-6763999848--94-3
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCE--EEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEEC
Q ss_conf 99965457668999937998999951898099996699922--4674067678899999858999999646980999976
Q 002782 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607 (882)
Q Consensus 530 ~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~s~~g~~l~s~~~dg~i~iwd~ 607 (882)
..+. |...+.+++|+|++++|++++.|++|++|++..+.. +.. .+|...|++++|+|+|++|++++.|+.|++|++
T Consensus 443 ~~~~-~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 443 TEVP-ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp EEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred EEEE-CCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEEC
T ss_conf 4640-68895499992899899996899739999945992224101-577886079999899998999948998999885
Q ss_pred CC-CEEEEE--ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCHH
Q ss_conf 88-816777--22577746899992799799997289979999879778
Q 002782 608 RT-GECIAT--YDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTAA 653 (882)
Q Consensus 608 ~~-~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw~~~~~~ 653 (882)
.+ +++... +..|...|++++|+||+++|++++.|+.|++|++.++.
T Consensus 521 ~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 521 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp GGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
T ss_conf 7787223210264046642589989989979999799729999788755
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=480.04 Aligned_cols=588 Identities=11% Similarity=0.095 Sum_probs=424.1
Q ss_pred CEEECCCCCEEEEEECC-EEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCC
Q ss_conf 46994699899997389-19999968980456532898639999985899989999689829999889880678751378
Q 002782 24 PLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD 102 (882)
Q Consensus 24 ~ia~s~dg~~la~~~~~-~I~i~d~~~~~~~~~l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~ 102 (882)
+++|+|||++||+++.+ .|++|+..+.+....+. |...|++++|+| +++|++++.|+.|++||+.+++++..+. |.
T Consensus 22 ~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~ 98 (902)
T 2oaj_A 22 AAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP 98 (902)
T ss_dssp EEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS
T ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCEEEEECC-CCCCEEEEEECC-CCEEEEEECCCEEEEEECCCCCEEEEEC-CC
T ss_conf 99997999989999297989999689947999868-999779999908-9889999895959999899996899974-89
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEE-----------EEEECCCCCEEEEEEECCCCCCEEEEEECCCCEE
Q ss_conf 79799999699989999938993999987999389-----------9864499857999991189961999995799099
Q 002782 103 GPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT-----------HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVR 171 (882)
Q Consensus 103 ~~V~~i~fs~~~~~las~~~dg~i~vwd~~~~~~~-----------~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~ 171 (882)
..|++++|+|+++++++|+.||.|++||+.++.+. ..+.+|.+.|.+++|+|++ ...+++|+.||.|
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~-~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD-IGTVLISYEYVTL- 176 (902)
T ss_dssp SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE-EEEEEEECSSCEE-
T ss_pred CCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCC-CCEEEEEECCCCE-
T ss_conf 98799998799998999949992999999999626503043210002544578973899976699-9989999189849-
Q ss_pred EEECCCCEEEEEECCC------------------CCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEE--EC----
Q ss_conf 9988988379883376------------------42669999906999999995799599970588602343--13----
Q 002782 172 VWDLLAKKCVATLDKH------------------FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT--VP---- 227 (882)
Q Consensus 172 iwd~~~~~~~~~l~~h------------------~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~---- 227 (882)
+||+.+++++..+..| ...|.+++|+|++.+|++++.||.|++||+.+++.+.. +.
T Consensus 177 lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~ 256 (902)
T 2oaj_A 177 TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEI 256 (902)
T ss_dssp EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCT
T ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCC
T ss_conf 99877896579983355776777654433234567776899985999999999899939999878996888885012345
Q ss_pred -------------CCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCC-----CEEEEEECCCCEEEEE
Q ss_conf -------------7430657896299998653232100000100246643099997399-----8399997888506640
Q 002782 228 -------------TYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGER-----GIVRMWNADSACLYEQ 289 (882)
Q Consensus 228 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~w~~~~~~~~~~ 289 (882)
....+..+.+.+.... .....+++++.+ ..+.+|+......+..
T Consensus 257 ~~~~~~~~~~~~~~~~~V~~v~w~~~~~p------------------d~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~ 318 (902)
T 2oaj_A 257 NVPQPDYIRDSSTNAAKISKVYWMCENNP------------------EYTSLLISHKSISRGDNQSLTMIDLGYTPRYSI 318 (902)
T ss_dssp TSCCTTCCCCCSSCCCEEEEEEEEECSST------------------TEEEEEEEEECSTTSSCCCEEEEEEEECCCGGG
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEECCCC------------------CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC
T ss_conf 78777678888555677457999734999------------------887899968877778885289995478987555
Q ss_pred ----------CCCCEEEEECCCCCCCCEEEEEECC----------CCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEE
Q ss_conf ----------2785122101377676514999806----------99817999708808999711366310103434352
Q 002782 290 ----------KSSDVTISFEMDDSKRGFTAATVLP----------SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRL 349 (882)
Q Consensus 290 ----------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 349 (882)
........... .....+..+.+.+ +...+++.+.++.+.+|+................+
T Consensus 319 ~s~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l 397 (902)
T 2oaj_A 319 TSYEGMKNYYANPKQMKIFPL-PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL 397 (902)
T ss_dssp CCHHHHHHHHHSCSEEEEECC-SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred CCHHHHHHHHCCCCCEEEEEC-CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 425565466417452278741-8999547999977889886778785069999179848999789998556555689852
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECC---CCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEE
Q ss_conf 35587347878847899689999738838999699---950235630887424896532304997899996369829999
Q 002782 350 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS---SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426 (882)
Q Consensus 350 ~~~~~~i~~~~~~~~~~~~l~~~~~~~~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 426 (882)
.++...+.++++.+.. ..+|+.. .......+.+|...+..++ ++|+++. +++|+.|++|++|
T Consensus 398 ~~~~~~v~~~~~s~~~------------~~~w~~~~~~~~~~~~~l~G~~~~v~sv~--~spdg~~-laSgs~DgtVrlW 462 (902)
T 2oaj_A 398 SWLRPLATTSMAASVP------------NKLWLGALSAAQNKDYLLKGGVRTKRQKL--PAEYGTA-FITGHSNGSVRIY 462 (902)
T ss_dssp TTBTTBEEEEEEEEEE------------HHHHHHHHHTTBCCCCSCCCSBCCCCCCC--CCSEEEE-EEEEETTSEEEEE
T ss_pred CCCCCCEEEEEEEECC------------HHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCCCE-EEEECCCCCEEEE
T ss_conf 2358972489999749------------99998888604699975457857787533--3666758-9996589838999
Q ss_pred ECCCCEEE--EEE---------ECCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCC-------C--------
Q ss_conf 48995478--654---------054333899998158981999830899089986379999977-------7--------
Q 002782 427 DSESRCCV--GVG---------TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE-------Q-------- 480 (882)
Q Consensus 427 d~~~~~~~--~~~---------~~~~~~v~~i~~s~~~~~~l~s~~~dg~i~iw~~~~~~~~~~-------~-------- 480 (882)
|+.++... ..+ .+|...|.+++|+|+++ ++++++.||+|++|++.+...... .
T Consensus 463 d~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (902)
T 2oaj_A 463 DASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRF 541 (902)
T ss_dssp ESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEECCC---------------CCSC
T ss_pred ECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEECCCCC-EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 787764567736775015413778887646999638999-6999945857999992486555754557786651134551
Q ss_pred --------------------CCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEE-----EE-C
Q ss_conf --------------------543210010010278804999828996899971899389995899616999-----96-5
Q 002782 481 --------------------PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-----FR-G 534 (882)
Q Consensus 481 --------------------~~~~~~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~~~~~~-----~~-~ 534 (882)
.....+...+..|...|++++|+|+| +||+|+.|++|++||+.+...+.. +. +
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~g 620 (902)
T 2oaj_A 542 SLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGA 620 (902)
T ss_dssp CGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCC
T ss_conf 3467965432242368988777601469998688867799964876-899995897699998889839997024672646
Q ss_pred CCCCEEEEEEC-----CCC---CEEEEEECCCCEEEEEC---CCCCEEEEEECCC-----CCEEEEE-EE----------
Q ss_conf 45766899993-----799---89999518980999966---9992246740676-----7889999-98----------
Q 002782 535 HKRGIWSVEFS-----PVD---QVVITASGDKTIKIWSI---SDGSCLKTFEGHT-----SSVLRAS-FL---------- 587 (882)
Q Consensus 535 ~~~~v~~i~~s-----~~~---~~l~s~~~d~~i~iwd~---~~~~~~~~~~~h~-----~~v~~~~-~s---------- 587 (882)
|...|++++|+ ||+ ++|++++.|++|++|++ .+|++...+.+|. ++|..+. |+
T Consensus 621 h~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~ 700 (902)
T 2oaj_A 621 QSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLAT 700 (902)
T ss_dssp CCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCB
T ss_pred CCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 66613999999984178987633899995687399999955899868999667244078896479985866879736688
Q ss_pred ------------ECCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEE---E------ECCCCCEEEEEECCCCEEE
Q ss_conf ------------589999996469809999768881677722577746899---9------9279979999728997999
Q 002782 588 ------------TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL---A------VGKKTEMFATGGSDALVNL 646 (882)
Q Consensus 588 ------------~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l---~------~s~~~~~l~s~~~dg~i~i 646 (882)
+++..|+++ +..+++|++.++++......|...+.++ . +++++..|+++..||.|++
T Consensus 701 ~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~ 778 (902)
T 2oaj_A 701 IPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRV 778 (902)
T ss_dssp HHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEE
T ss_pred HHHHHCCCCCCCCCEEEEEEE--CCCEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEE
T ss_conf 789725577887773999993--540599967533512367256201447778870135554467369999927995999
Q ss_pred EECCCHHH
Q ss_conf 98797787
Q 002782 647 WHDSTAAE 654 (882)
Q Consensus 647 w~~~~~~~ 654 (882)
|++.+.+.
T Consensus 779 ~s~p~l~~ 786 (902)
T 2oaj_A 779 FTIPDFKE 786 (902)
T ss_dssp EETTTCCE
T ss_pred EECCCHHH
T ss_conf 97856477
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=459.90 Aligned_cols=552 Identities=13% Similarity=0.097 Sum_probs=405.9
Q ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCE
Q ss_conf 32898639999985899989999689829999889880678751378797999996999899999389939999879993
Q 002782 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF 135 (882)
Q Consensus 56 l~~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~i~fs~~~~~las~~~dg~i~vwd~~~~~ 135 (882)
..+|...|++++|+|++++||+|+.||.|++|+..+.+....+. |..+|.+++|+| +++|++++.|+.|++||+.+++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECC-CCCCEEEEEECC-CCEEEEEECCCEEEEEECCCCC
T ss_conf 16889984899997999989999297989999689947999868-999779999908-9889999895959999899996
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEE-----------EEECCCCCCEEEEEECCC-CCEE
Q ss_conf 8998644998579999911899619999957990999988988379-----------883376426699999069-9999
Q 002782 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV-----------ATLDKHFSRVTSMAITSD-GSTL 203 (882)
Q Consensus 136 ~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~dg~I~iwd~~~~~~~-----------~~l~~h~~~v~~l~~s~~-~~~l 203 (882)
++..+. |.+.|++++|+|+++. +++|+.||.|++||+.++.+. ..+.+|.+.|.+++|+|+ +..+
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~--l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDW--MLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSE--EEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EEEEEC-CCCCEEEEEECCCCCE--EEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCEE
T ss_conf 899974-8998799998799998--9999499929999999996265030432100025445789738999766999989
Q ss_pred EEEECCCEEEEEECCCCEEEEEECCC-------------------CEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 99957995999705886023431374-------------------30657896299998653232100000100246643
Q 002782 204 ISAGRDKVVNLWDLRDYSCKLTVPTY-------------------EMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLE 264 (882)
Q Consensus 204 ~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (882)
++++.|+.| +||+.+.+....+... ..+.++.+.|++.
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~---------------------- 224 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL---------------------- 224 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS----------------------
T ss_pred EEEECCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC----------------------
T ss_conf 999189849-998778965799833557767776544332345677768999859999----------------------
Q ss_pred EEEEEECCCCEEEEEECCCCEEEEECCC-----CEEE---EECCCCCCCCEEEEEECCC----CCCEEEEE-EC-----C
Q ss_conf 0999973998399997888506640278-----5122---1013776765149998069----98179997-08-----8
Q 002782 265 IHFITVGERGIVRMWNADSACLYEQKSS-----DVTI---SFEMDDSKRGFTAATVLPS----NQGLLCVT-AD-----Q 326 (882)
Q Consensus 265 ~~~~~~~~~g~i~~w~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~----~~~l~~~~-~~-----~ 326 (882)
.+++++.||.+++||..++........ .... ..........+..+.|.+. +..+++.. .+ .
T Consensus 225 -~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~ 303 (902)
T 2oaj_A 225 -HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQ 303 (902)
T ss_dssp -EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCC
T ss_pred -EEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCC
T ss_conf -9999989993999987899688888501234578777678888555677457999734999887899968877778885
Q ss_pred EEEEEEECCCCCCC-----------CEEEEEEEEC-CCCCCEEEEEEEC---------CCCCEEEEEECCCCEEEEECCC
Q ss_conf 08999711366310-----------1034343523-5587347878847---------8996899997388389996999
Q 002782 327 QLLLYTTVEVPEKK-----------MELILSKRLV-GYNEEILDLKFLG---------EEEQYLAVATNIEQVQVYDLSS 385 (882)
Q Consensus 327 ~i~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~i~~~~~~~---------~~~~~l~~~~~~~~i~i~d~~~ 385 (882)
.+.+|+....+... ........+. ++...+.++.+.+ .+...+++++.++.+++|++.+
T Consensus 304 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~ 383 (902)
T 2oaj_A 304 SLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPS 383 (902)
T ss_dssp CEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTT
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCC
T ss_conf 28999547898755542556546641745227874189995479999778898867787850699991798489997899
Q ss_pred CEEEE-------EEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEECC---CCEEEEEEECCCCCEEEEEECCCCCC
Q ss_conf 50235-------630887424896532304997899996369829999489---95478654054333899998158981
Q 002782 386 MSCSY-------VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE---SRCCVGVGTGHMGAVGAVAFSKKLQN 455 (882)
Q Consensus 386 ~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~i~~s~~~~~ 455 (882)
+.... .+..|...+.+++ +.+.. ..+|+.. .......+.+|...+.+++|+|+++
T Consensus 384 g~~~~~~~~~~~~l~~~~~~v~~~~--~s~~~------------~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~- 448 (902)
T 2oaj_A 384 GIFTDKASLFPQNLSWLRPLATTSM--AASVP------------NKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT- 448 (902)
T ss_dssp CCEECCGGGSCGGGTTBTTBEEEEE--EEEEE------------HHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE-
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEE--EEECC------------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 9855655568985223589724899--99749------------99998888604699975457857787533366675-
Q ss_pred EEEEEECCCEEEEEECCCCCCCCCCCCCCC-CHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCC--------
Q ss_conf 999830899089986379999977754321-00100102788049998289968999718993899958996--------
Q 002782 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLK-AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL-------- 526 (882)
Q Consensus 456 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~s~~~~~la~~s~dg~i~iwd~~~~-------- 526 (882)
++++++.|++|++||+.............. ......+|...|.+++|+|++++||+|+.||+|++|++.++
T Consensus 449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~ 528 (902)
T 2oaj_A 449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENR 528 (902)
T ss_dssp EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC------
T ss_pred EEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCC
T ss_conf 89996589838999787764567736775015413778887646999638999699994585799999248655575455
Q ss_pred -------------------------------------EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf -------------------------------------1699996545766899993799899995189809999669992
Q 002782 527 -------------------------------------VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569 (882)
Q Consensus 527 -------------------------------------~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d~~i~iwd~~~~~ 569 (882)
.++..+.+|...|++++|+||| +|++|+.|++|++||+.++.
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 529 PESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp ---------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEECCCCEEEEECCCCE
T ss_conf 77866511345513467965432242368988777601469998688867799964876-89999589769999888983
Q ss_pred EEE-----EEE-CCCCCEEEEEEE-----ECC---CEEEEEECCCEEEEEEC---CCCEEEEEECCC-----CCCEEEEE
Q ss_conf 246-----740-676788999998-----589---99999646980999976---888167772257-----77468999
Q 002782 570 CLK-----TFE-GHTSSVLRASFL-----TRG---AQIVSCGADGLVKLWTV---RTGECIATYDKH-----EDKIWALA 627 (882)
Q Consensus 570 ~~~-----~~~-~h~~~v~~~~~s-----~~g---~~l~s~~~dg~i~iwd~---~~~~~~~~~~~h-----~~~v~~l~ 627 (882)
.+. .+. +|.+.|++++|+ ||| .+|++++.||+|++|++ .+|++..++.+| .++|.++.
T Consensus 608 ~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~ 687 (902)
T 2oaj_A 608 IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKID 687 (902)
T ss_dssp EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEE
T ss_pred EEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCEECCCCCCEEEEE
T ss_conf 99970246726466661399999998417898763389999568739999995589986899966724407889647998
Q ss_pred -EC----------------------CCCCEEEEEECCCCEEEEECCCHHH
Q ss_conf -92----------------------7997999972899799998797787
Q 002782 628 -VG----------------------KKTEMFATGGSDALVNLWHDSTAAE 654 (882)
Q Consensus 628 -~s----------------------~~~~~l~s~~~dg~i~iw~~~~~~~ 654 (882)
|+ +++..|+++ +..+++|+..+++.
T Consensus 688 ~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 688 AFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKS 735 (902)
T ss_dssp EEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCE
T ss_pred EEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEE--CCCEEEEECCCCCC
T ss_conf 5866879736688789725577887773999993--54059996753351
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=458.78 Aligned_cols=516 Identities=16% Similarity=0.191 Sum_probs=402.2
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC----EEEEEEECCCCC-EEEEEECC--CCCEEEEEECCCCEEEEE
Q ss_conf 89863999998589998999968982999988988----067875137879-79999969--998999993899399998
Q 002782 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL----KCLRSWKGHDGP-AIGMACHP--SGGLLATAGADRKVLVWD 130 (882)
Q Consensus 58 ~~~~~I~~l~~spdg~~las~~~dg~i~iwd~~~~----~~~~~~~~h~~~-V~~i~fs~--~~~~las~~~dg~i~vwd 130 (882)
.|...|++++|+|++++|++++ ++.|++||+.++ +....+.+|... |.+++|+| ++++|++++.|+.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEE
T ss_conf 7658536899889999799935-984999977788776514318805788449999979678998899964898799976
Q ss_pred CCCC--------EEEEEEECCCCCEEEEEEECCCCCCEEEEEECC----CCEEEEECCCCEEEEEECCCCCCEEEEEECC
Q ss_conf 7999--------389986449985799999118996199999579----9099998898837988337642669999906
Q 002782 131 VDGG--------FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD----ATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198 (882)
Q Consensus 131 ~~~~--------~~~~~~~~h~~~v~~i~f~~~~~~~~l~sg~~d----g~I~iwd~~~~~~~~~l~~h~~~v~~l~~s~ 198 (882)
+.++ .....+.+|...|.+++|+|++.. +++++.+ +.|.+|| .++.+..+.+|...|.+++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRR--LCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSE--EEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCE--EEEECCCCCCCCEEEEEE--CCCCCEEEECCCCCEEEEEECC
T ss_conf 888765544554200011125663799999079998--999316877755799997--8981031306774388999887
Q ss_pred CCC-EEEEEECCCEEEEEECCCCEEEEEECCCC----EEEEEEECCC-CCCCCCCCCCCHHHHHHCCCCCCCEEEEEECC
Q ss_conf 999-99999579959997058860234313743----0657896299-99865323210000010024664309999739
Q 002782 199 DGS-TLISAGRDKVVNLWDLRDYSCKLTVPTYE----MVEAVCAIPP-GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGE 272 (882)
Q Consensus 199 ~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (882)
++. .+++++.|+.|++|++.+.+....+..+. .+.++.+.++ +. .+++++.
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------------------~l~~~~~ 227 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE-----------------------FVITVGS 227 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC-----------------------EEEEEET
T ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCC-----------------------EEEEEEC
T ss_conf 89968999957995999969996101320256777742899997897788-----------------------8999868
Q ss_pred CCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECC-
Q ss_conf 9839999788850664027851221013776765149998069981799970880899971136631010343435235-
Q 002782 273 RGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVG- 351 (882)
Q Consensus 273 ~g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~- 351 (882)
+|.+++|+..++........ ....+...+..+.+. ++..+++++.++.+.+|+..... ....+..
T Consensus 228 dg~i~vwd~~~~~~~~~~~~------~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~ 293 (615)
T 1pgu_A 228 DRKISCFDGKSGEFLKYIED------DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK-------CVQKWTLD 293 (615)
T ss_dssp TCCEEEEETTTCCEEEECCB------TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE-------EEEEEECC
T ss_pred CCEEEEEECCCCCEEEEECC------CCCCCCCCEEEEEEC-CCCEEEEECCCCCEEEEECCCCC-------EEEEECCC
T ss_conf 98089998999978589525------444567755899981-89979998489948999788892-------78788478
Q ss_pred ---CCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEEEC
Q ss_conf ---58734787884789968999973883899969995023563088742489653230499789999636982999948
Q 002782 352 ---YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428 (882)
Q Consensus 352 ---~~~~i~~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 428 (882)
....+..+.+. ++..+++++.++.+++|++.++.....+.+|...+.++. + ++ +++++.||.+++|+.
T Consensus 294 ~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~--~-~~----l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 294 KQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALT--V-NP----LISGSYDGRIMEWSS 364 (615)
T ss_dssp TTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEE--T-TT----TEEEETTSCEEETTT
T ss_pred CCCCCCCEEEEEEC--CCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE--E-CC----CEEECCCCEEEEEEC
T ss_conf 77545714699918--997699997899789998889928899947778789999--5-67----489879995999875
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCE
Q ss_conf 99547865405433389999815898199983089908998637999997775432100100102788049998289968
Q 002782 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 508 (882)
Q Consensus 429 ~~~~~~~~~~~~~~~v~~i~~s~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~~~~~ 508 (882)
. .+. ..|...|.+++|.+ +. .+++++.|+.+++|++..... ...+.+++++|++.+
T Consensus 365 ~---~~~--~~~~~~v~~~~~~~-~~-~l~~~~~d~~i~~~~~~~~~~-----------------~~~~~~~~~s~~~~~ 420 (615)
T 1pgu_A 365 S---SMH--QDHSNLIVSLDNSK-AQ-EYSSISWDDTLKVNGITKHEF-----------------GSQPKVASANNDGFT 420 (615)
T ss_dssp T---EEE--CCCCSCEEEEECCS-TT-CCEEEETTTEEEETTEEEEEC-----------------SSCEEEEEECSSSEE
T ss_pred H---HHC--CCCCCCEEEEEECC-CC-EEEEEECCCCEEEEECCCCCC-----------------CCCCEEEEECCCCCE
T ss_conf 2---415--75568517999789-86-799995899799988666763-----------------678469998289878
Q ss_pred EEEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCEE-EEEECCCCCEEEEEE
Q ss_conf 999718993899958996169999654576689999379989999518-980999966999224-674067678899999
Q 002782 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKIWSISDGSCL-KTFEGHTSSVLRASF 586 (882)
Q Consensus 509 la~~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~ 586 (882)
++++ .++.+.+|+..+++.+..+. +...+.+++|+ ++++++++. |+.|++|++.++... ..+.+|...|.+++|
T Consensus 421 ~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~ 496 (615)
T 1pgu_A 421 AVLT-NDDDLLILQSFTGDIIKSVR-LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 496 (615)
T ss_dssp EEEE-TTSEEEEEETTTCCEEEEEE-CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE
T ss_pred EEEE-CCCCEEEEECCCCCEEEECC-CCCCCEEEEEC--CCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 9996-79826999446786655515-67872077883--88899965689869999888854353336776575079999
Q ss_pred EECCCEEEEEECCCEEEEEECCCCEEEEEECC-CCCCEEEEEECC----------CCCEEEEEECCCCEEEEECCCH
Q ss_conf 85899999964698099997688816777225-777468999927----------9979999728997999987977
Q 002782 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDK-HEDKIWALAVGK----------KTEMFATGGSDALVNLWHDSTA 652 (882)
Q Consensus 587 s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~s~----------~~~~l~s~~~dg~i~iw~~~~~ 652 (882)
+|++++|++++.||.|++|++.+++++..+.+ |...|++++|+| ++++|++++.||.|++|+..++
T Consensus 497 s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred CCCCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCC
T ss_conf 89999899817998599865777762467604788714699976832345332468888999817971999977888
Done!