BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002784
         (881 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B2IZP5|SYI_NOSP7 Isoleucine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 /
           PCC 73102) GN=ileS PE=3 SV=1
          Length = 959

 Score =  561 bits (1445), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 272/471 (57%), Positives = 333/471 (70%), Gaps = 54/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT+F MRANA+ REPEI K W++++++ R+ + N GE F+LHDGPPYA
Sbjct: 3   ESGSYKDTVNLPKTSFDMRANAIKREPEIQKFWEENKIYDRLFENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY++L+  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNMKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            +LR KA +F  ATV  Q  +FKRYG+W DW+NPYLTL PEYEAAQ              
Sbjct: 123 LQLRQKAKEFGLATVDNQRQNFKRYGIWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGHVSRSIYA F + S   +   LL E+  DLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVAVNA L YAVVE+       S + A  K +           ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNADLNYAVVEV-------SQSEAQSKFK-----------YLIVA 284

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           +DLV  L +  G +L +K T  G+DLE+  Y HP+ +R+ P+V+GGDYITTESGTGLVHT
Sbjct: 285 ADLVERLSSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHT 344

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLL 404

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  VKW+P Q
Sbjct: 405 KEEPYPHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAIATVKWIPAQ 455



 Score =  282 bits (722), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 216/341 (63%), Gaps = 30/341 (8%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 597
           P YGADVLRLWVSSVDY+GDV IG  +++QM+D+  K+R T R+LLG+L D+    +++ 
Sbjct: 637 PAYGADVLRLWVSSVDYSGDVRIGKNIIKQMNDVRGKIRNTARFLLGSLDDFDPEKDTVP 696

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
           +++LP +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDRLY 
Sbjct: 697 FEELPELDRYMLHRITEVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYI 756

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
               +F RRSCQTVL   L ++ R IAP+L H AED+WQ LP+       +  + VFE+ 
Sbjct: 757 SAKDAFRRRSCQTVLKIALDNLARAIAPVLSHTAEDIWQYLPYK------TPYKSVFEAG 810

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           W  ++EKWR   + E  FW ++ ++R +VNK LE+ R  K IGSSLEAKV +   D  L 
Sbjct: 811 WVQVEEKWRNPELAE--FWSELRKIRDKVNKTLEIYRLQKTIGSSLEAKVVVHVFDERLR 868

Query: 778 SRLREMCTAKHDA-------DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK- 829
            RL+ +    H +       D L+ +F+ SQVEV PS P               EG D  
Sbjct: 869 QRLQALNPNTHGSVEKSNGVDELRYLFLASQVEV-PSEP------------IFEEGDDAG 915

Query: 830 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
           ++I V +A+G KC+RCWNYST VG   EHP +C RC   LA
Sbjct: 916 IYIQVYKADGEKCDRCWNYSTHVGESAEHPLICERCVAALA 956


>sp|Q8YXY3|SYI_NOSS1 Isoleucine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
           GN=ileS PE=3 SV=1
          Length = 960

 Score =  560 bits (1444), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/471 (58%), Positives = 329/471 (69%), Gaps = 52/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W+++++F  ++  N GE F+LHDGPPYA
Sbjct: 3   ETGSYKDTVNLPKTNFDMRANAIKREPEIQKFWEENKIFESLSQNNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ+L    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            +LR KA +FA ATV  Q  +FKRYGVW DW+NPYLTL PEYEAAQ              
Sbjct: 123 LQLRQKAKEFALATVDNQRQNFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH SRSIYA F + S   +   LL E+LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTSFAEAAKPLLGEYLPDLGVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVAVN  L Y++VE+               SR G   +   K ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGDLNYSLVEV---------------SRIGAETQSNFK-YLIVA 286

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           +DLV  L A    +L +K T  G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 287 ADLVERLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHT 346

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDYV  L+YGLPIL+PVDD G FT+EAG+F+GL+VLG+GN AV+  L    SL+
Sbjct: 347 APGHGQEDYVVGLRYGLPILAPVDDNGDFTQEAGQFAGLNVLGEGNQAVIDALTAAGSLL 406

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 407 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIAAVKWIPAQ 457



 Score =  282 bits (722), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 219/337 (64%), Gaps = 17/337 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADV+RLW SSVDYTGDV +G  +++Q++D+  K+R T R+LLG+L+D+    N
Sbjct: 636 KKEPPYGADVMRLWASSVDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLYDFDPEKN 695

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           ++ ++++P +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVQFEEMPQLDKYMLHRIREVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     +F RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 756 LYISAPDAFRRRSCQTVIHIALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 809

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           E+ W  ++EKW    + E  FW ++ +LRT+VNKVLE AR  K+IGSSLEAK  ++  DA
Sbjct: 810 EAGWVQVEEKWHNPELAE--FWQQLRQLRTDVNKVLEQARVEKMIGSSLEAKALIYVKDA 867

Query: 775 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 833
           +    +  +     +  D L+ +F+ SQVE+L S     +++  Y+ +      D   IG
Sbjct: 868 NSRKAIATLNPEVGNGVDELRYLFLTSQVELLDSADK--LQDGKYTSQ-----SDSWGIG 920

Query: 834 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
           V  AEG KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 921 VVNAEGQKCDRCWNYSTHVGESAEHPLLCERCVPALA 957


>sp|B7KFT1|SYI_CYAP7 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=ileS
           PE=3 SV=1
          Length = 959

 Score =  541 bits (1394), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/471 (56%), Positives = 327/471 (69%), Gaps = 56/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+ K W ++Q++  +++ N G+ F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTKFDMRANAVKREPELQKFWAENQIYETLSENNPGDIFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKL + YK RYVPGWDCHGLPIELKVLQS+ +  ++DLTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLQRGYKARYVPGWDCHGLPIELKVLQSMKQKEREDLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            KLR KA  FA +T K Q  SF+R+GVW DW +PYLTL P+YEAAQ              
Sbjct: 123 LKLRHKARDFALSTQKEQSESFQRFGVWGDWEHPYLTLTPDYEAAQIGVFGQMALKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH SRS+YAVF +  A  +   +L  +L DLG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAVFPITKASDTAKKVLTPYLKDLGVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVA+N  L YAVVE        S  P         V K Q   + IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPDLTYAVVE--------SGKP---------VCKHQ---YFIVA 282

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           +DLV  L A + T L +K TL G DLE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHT
Sbjct: 283 ADLVDKLSATFETPLTVKATLKGEDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHT 342

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDY+   +YGLP+LSPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+
Sbjct: 343 APGHGQEDYIVGQRYGLPVLSPVDEKGNFTSEAGQFAGLNVLKDANEAIIKELEEKGALL 402

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI  V W+PPQ
Sbjct: 403 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDTALEAIKNVTWIPPQ 453



 Score =  274 bits (700), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/339 (43%), Positives = 214/339 (63%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ D+  K+R T R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADVLRLWVSSVDYSSDVPIGQNILKQLVDVRNKIRNTARFLLGNLHDFDPEKD 691

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +++Y+DLP +D+Y L ++  +   + E++E++QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 692 TVAYEDLPELDRYMLHRITEVFTEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 751

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     +  RRSCQTVL   L ++ + IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 752 LYISDPNNLRRRSCQTVLKVALENLAKSIAPVLCHLAEDIWQFLPYK------TPYKSVF 805

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           E+ W  L+ +W+   +     W K  ++R EVNKV+E+AR  K+IGSSL+AKV L+  D 
Sbjct: 806 EAGWVELESEWKRPELTPK--WSKFRQIRDEVNKVMELARKDKMIGSSLDAKVLLYVSDK 863

Query: 775 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
            L   L         + +  D L+ +F+ SQV+++ S     I    Y  E    G    
Sbjct: 864 ELREHLDSFNPSDSLSNNRVDELRYLFLASQVDLVDSPKT--IGKANYKSESETLG---- 917

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            + + +A+G KC+RCWNYST VG FV+ PTLC RC   L
Sbjct: 918 -VAIVKADGEKCDRCWNYSTHVGEFVDDPTLCERCNAAL 955


>sp|B7K5H5|SYI_CYAP8 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=ileS
           PE=3 SV=1
          Length = 959

 Score =  532 bits (1370), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/471 (55%), Positives = 322/471 (68%), Gaps = 56/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPEI + W ++ ++ +++  N  + F+LHDGPPYA
Sbjct: 3   EPKSYKDTVNLPQTDFSMRANAVQREPEIQQFWTENCIYEQLSQNNPEDLFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKLL+ +KVRYVPGWDCHGLPIELKVLQS+  + ++ LTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLLRGHKVRYVPGWDCHGLPIELKVLQSMKSEEREGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            KLR KA  FA  T + Q   FKRYGVW DW NPYLTL PEYEAAQ              
Sbjct: 123 LKLRRKARDFALKTQQEQAEGFKRYGVWGDWENPYLTLTPEYEAAQIGVFGQMALKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH S+SI+A F ++ +      +L+ FL +LG+A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVA+N +L YA+VE  S                 N+   Q   +IIVA
Sbjct: 243 WTTTPWTLPGNLAVALNPELTYAIVEQTS-----------------NLCNYQ---YIIVA 282

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           +DLV  L A + T+L +K TL G  LE+  Y HP+ +R+  +VIGGDY+TTESGTGLVHT
Sbjct: 283 ADLVERLSATFSTELTVKATLPGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHT 342

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDY+   +YGL +LSPVDD G FTEEAG+FSGL+VL D N A++  L  + SL+
Sbjct: 343 APGHGQEDYIVGQRYGLQVLSPVDDAGNFTEEAGQFSGLNVLKDANQAIINELKNKGSLL 402

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA++AI  V W+PPQ
Sbjct: 403 KEEPYLHKYPYDWRTKKPTIFRATEQWFASVEGFREAALEAIKSVNWIPPQ 453



 Score =  288 bits (738), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKD 691

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           ++SYD LP +DQY L ++  +   + +++E +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYDQLPELDQYMLHRITEVFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY   T S  RRSCQTVL   + S+ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLKVAVESLAKAIAPVLCHMAEDIWQFLPYK------TPYQSVF 805

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
            S W  + ++W    +     WGK+ ++RTEVNKVLE AR  K IGSSL+AKV L+  D 
Sbjct: 806 ASGWVEMQKQWERPEL--TASWGKLRQIRTEVNKVLEQARNEKAIGSSLDAKVLLYVSDQ 863

Query: 775 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
               +L           +  D L+ + + SQVE++ S     I+   Y  E      + V
Sbjct: 864 DFKKQLESFNPNDSLKGNQVDELRYLVLASQVELVDSLE--AIKKADYQSE-----SELV 916

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 917 SVGVVKAEGQKCDRCWNYSTKVGEFSDDPTICERCNAAL 955


>sp|B0JSP4|SYI_MICAN Isoleucine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
           GN=ileS PE=3 SV=1
          Length = 952

 Score =  528 bits (1361), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/465 (55%), Positives = 315/465 (67%), Gaps = 63/465 (13%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPVKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQ                  
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 268 ------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 309
                             YPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTT 243

Query: 310 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 369
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVETS------------------------ESNYLIVATDLV 279

Query: 370 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 429
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 430 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 489
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 490 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  286 bits (733), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 775 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
           SL   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 SLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            +G+ +AEG KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKAEGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>sp|B1WVA3|SYI_CYAA5 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142)
           GN=ileS PE=3 SV=1
          Length = 959

 Score =  524 bits (1349), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/467 (55%), Positives = 316/467 (67%), Gaps = 56/467 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LPKT F MRANA+ REPE+ K W D+Q++ +++ +N  E FVLHDGPPYANG+L
Sbjct: 7   YKDTVNLPKTNFSMRANAVKREPELQKFWADNQIYEKLSQENPEEVFVLHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK LKDIIN+YKLL+ YKVRYVPGWDCHGLPIELKVLQS+    ++ LTP KLR
Sbjct: 67  HMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSMKSKEREGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            KA  FA  T + Q   FKR+GVW DW NPYLTL PEYEAAQ                  
Sbjct: 127 HKARDFALKTQEEQAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMALKGYIYRGLK 186

Query: 268 ------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 309
                             YPEGH SRSI+A F ++ A   T  +L  FL  LG+A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTT 246

Query: 310 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 369
           PWT+P N AVA+N  L YAVVE  S                 +V   Q   ++IVA+DLV
Sbjct: 247 PWTLPGNLAVALNPDLNYAVVEQNS-----------------DVCNYQ---YLIVAADLV 286

Query: 370 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 429
             L   + T+L +K TL G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGH
Sbjct: 287 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGH 346

Query: 430 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 489
           GQEDY+   +YGL ILSPVD +G FTEEA +F+GL+VL D N  ++  L E+ SL+ EE 
Sbjct: 347 GQEDYMVGQRYGLGILSPVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEA 406

Query: 490 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
           Y+HKYPYDWRTKKPTIFRATEQWFASV+GFR AA+ AI  V+W+P Q
Sbjct: 407 YQHKYPYDWRTKKPTIFRATEQWFASVKGFRDAALTAIKTVQWIPAQ 453



 Score =  299 bits (766), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 217/339 (64%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKD 691

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 805

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
            + W    ++W    +     W KI  +R EVN  LE+AR  K IGSSL+AKV L+  + 
Sbjct: 806 TAGWVKTSKQWENSELSAS--WAKIRGIRNEVNNALELARKEKAIGSSLDAKVLLYVPEQ 863

Query: 775 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
           +L  +L +   A     +  D L+   + SQVE++ S  +  I+N  Y  E      D V
Sbjct: 864 NLRQQLEKFNPADSLTGNHVDELRYFVLASQVELVDSLDS--IKNADYHSE-----SDLV 916

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 917 SVGVIKAEGEKCDRCWNYSTKVGEFKDDPTICERCNAAL 955


>sp|B8HMX3|SYI_CYAP4 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC
           29141) GN=ileS PE=3 SV=1
          Length = 955

 Score =  520 bits (1338), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/471 (54%), Positives = 317/471 (67%), Gaps = 62/471 (13%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LP+T F MRANA+ REPE+ K W ++Q++  ++ +N G+ F+LHDGPPYA
Sbjct: 3   EPGSYKETVNLPQTAFDMRANAVKREPELQKFWAENQIYENLSQENPGDPFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIIN+Y +LQ  KVRYVPGWDCHGLPIELKVLQ +  + +  LTP
Sbjct: 63  NGDLHIGHALNKILKDIINKYWMLQGRKVRYVPGWDCHGLPIELKVLQGMKSEQRAALTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
             LR  A +FA  TV+ Q  SFKRYGVW +W+NPYLTL PEYEAAQ              
Sbjct: 123 LSLRQAAKEFALQTVERQKQSFKRYGVWGEWDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH SRSIY  F + S   +   +L ++LP+L +A+
Sbjct: 183 RGLKPVYWSPSSQTALAEAELEYPEGHTSRSIYVSFALTSLSATAEAVLKDYLPNLKVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVA+N  L YAVVE                       KD    +++VA
Sbjct: 243 WTTTPWTIPGNLAVALNPDLTYAVVE-----------------------KDGS--YLLVA 277

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           ++LV  LE   G  L IK T+AG  LE+  Y HP+ +RQ P+V+ GDY+TT+SGTGLVHT
Sbjct: 278 NELVERLETTLGVSLPIKTTIAGQALEHSTYQHPLFDRQGPLVM-GDYVTTDSGTGLVHT 336

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDYV    YGLPILSPVD  G+FTEEAG+F+GL VL +GN AV++ L +  +L+
Sbjct: 337 APGHGQEDYVVGQHYGLPILSPVDGNGRFTEEAGQFAGLKVLDEGNEAVIQALQQVGALL 396

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EE Y HKYPYDWRTKKP I RATEQWFASVEGFR+AA+ AI QV+W+P Q
Sbjct: 397 KEEAYSHKYPYDWRTKKPVILRATEQWFASVEGFREAALQAIAQVQWIPAQ 447



 Score =  287 bits (734), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 208/339 (61%), Gaps = 16/339 (4%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           +E P YGAD+LRLWVSSVDY+ DV +G  +L+QM+DIYRK+R T R+LLGNLHD+    N
Sbjct: 626 KEDPPYGADILRLWVSSVDYSSDVPLGKNILKQMADIYRKIRNTARFLLGNLHDFDPANN 685

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
            + YD LP +D+Y L ++  +   + E++ SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 KVEYDRLPQLDRYMLHRIVEVFTEVNEAFTSYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY      F RRSCQTVL   L ++ + IAP++PHLAED+WQ LP+       +  + VF
Sbjct: 746 LYISAPDDFRRRSCQTVLWIALENLAKAIAPVVPHLAEDIWQFLPYP------TPYKSVF 799

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           E+ W  LD  W       +  + ++  LR +VN+ LE  R  K+IG+SLEAKV L+  D 
Sbjct: 800 EAGWVSLDATWTNPDPQLLETFEQVRLLRFKVNECLEKLRVNKVIGASLEAKVLLYIADP 859

Query: 775 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
               + + +      A    D L+  F+ SQVE+L ++P+ L        EY  E  D  
Sbjct: 860 EKRQQWQNLNPPALAAISGVDELRYFFLTSQVELL-NSPDQLSE---LKSEYRFEFGDSS 915

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
             GV  A+G KC+RCWNYST VG   +H  LC RC  V+
Sbjct: 916 -GGVLPADGQKCDRCWNYSTYVGKDDKHLLLCERCVAVM 953


>sp|P73505|SYI_SYNY3 Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
           Kazusa) GN=ileS PE=3 SV=1
          Length = 988

 Score =  519 bits (1336), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/471 (55%), Positives = 306/471 (64%), Gaps = 56/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA  REPEI + W +  ++  +AD N  + FVLHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTRFDMRANANKREPEIQQYWQEKGIYADLADNNPKDLFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNK+LKDIIN+YKLLQ +KV YVPGWDCHGLPIELKVLQSL    + +LTP
Sbjct: 63  NGALHMGHALNKVLKDIINKYKLLQGHKVHYVPGWDCHGLPIELKVLQSLKSSERAELTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
             LR KA  FA    + Q   F+RYG+W DW  PYLTL PEYEAAQ              
Sbjct: 123 LTLRHKARDFALKAQQEQAVGFQRYGIWGDWKKPYLTLTPEYEAAQIGVFGAMALKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH SRSIY  F +  A    + +L  ++ DL +A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSRSIYVSFPITQAGEKAAEILAPYIDDLAVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVA+N +L YAVVE +S +   S                    ++IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPELTYAVVETESHIFHRS--------------------YLIVA 282

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
            DLV  L   +G KL +K TL G  LEN  Y HP+ +R  P+VIGGDY+TTESGTGLVHT
Sbjct: 283 LDLVEKLSETFGVKLTVKVTLQGESLENTCYQHPLFDRVSPIVIGGDYVTTESGTGLVHT 342

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDYV   +YGLPILSPVD  G  TEEAGKF+GL+VL D N A++  L +Q  L+
Sbjct: 343 APGHGQEDYVVGQRYGLPILSPVDAAGNLTEEAGKFAGLNVLNDANEAIINALQDQKVLL 402

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EE YEHKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI +V W+P Q
Sbjct: 403 KEEAYEHKYPYDWRTKKPTIFRATEQWFASVEGFRDQALKAIKEVTWIPTQ 453



 Score =  279 bits (714), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 216/362 (59%), Gaps = 38/362 (10%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWV+SVDY  DV IG  +L+Q+ DI  K+R T R+LLGNLHD+    +
Sbjct: 633 KQEPAYGADVLRLWVASVDYANDVPIGQGILKQLVDIRNKIRNTARFLLGNLHDFNPETD 692

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +++Y+DLP +D+Y L ++  +   + E+YES+QFFK FQ +Q F +VDLSNFY D+AKDR
Sbjct: 693 AVAYEDLPELDRYMLHRMTEVFTEVTEAYESFQFFKFFQTVQNFCVVDLSNFYLDIAKDR 752

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     +  RRSCQT+L   L ++ + IAP+L HLAED+WQ LP+          E VF
Sbjct: 753 LYISAPNAPRRRSCQTILQLALENLTKAIAPVLCHLAEDIWQFLPYE------KPTESVF 806

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF---- 770
           +S W  LD +W+   + +   W  + +LR  +N++LE AR  K+IGSSLEAK+ +     
Sbjct: 807 QSGWVNLDAQWQQPQLAQK--WVSLRQLRDGINQLLEQARRDKVIGSSLEAKLIIVDPRT 864

Query: 771 ----TDDAS-------LASRLREMCTAKHDAD----TLQRIFIISQVEVLPSTPNGLIRN 815
               TD+             L        D +    +L+ IF+ SQVE + S    +  +
Sbjct: 865 AESGTDEKQGENFVHWFYGWLENFNEPTFDPNDRKISLRNIFLTSQVEFIKSAE--IEPS 922

Query: 816 IPYSGEYLV--EGKDK------VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 867
             Y    ++  E  D       + I V++A+G KCERCWNYSTQVGSF + PT+C RC E
Sbjct: 923 FTYEETVVINLERHDNNIRTKPIKIIVTKADGHKCERCWNYSTQVGSFSDDPTICERCNE 982

Query: 868 VL 869
            L
Sbjct: 983 AL 984


>sp|B0C872|SYI_ACAM1 Isoleucine--tRNA ligase OS=Acaryochloris marina (strain MBIC 11017)
           GN=ileS PE=3 SV=1
          Length = 971

 Score =  508 bits (1309), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/471 (53%), Positives = 308/471 (65%), Gaps = 62/471 (13%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E GRYK TV+LPKT F MRANA+ REPE+ K W DHQ++  ++  N G+ FVLHDGPPYA
Sbjct: 3   EPGRYKKTVNLPKTKFDMRANAVKREPELQKFWADHQIYENLSQNNPGDVFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKD IN+++LLQ  KVRYVPGWDCHGLPIELKVLQ++  + +  LTP
Sbjct: 63  NGDLHIGHALNKILKDTINKFQLLQGRKVRYVPGWDCHGLPIELKVLQNIQPENRAKLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            KLR KA  FA  TV+ Q  SF+RYGVW +W NPYLTL PEYEAAQ              
Sbjct: 123 LKLRWKARDFALKTVEKQSKSFQRYGVWGNWENPYLTLKPEYEAAQIGVFGKMALKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGH SRSIY  F++     +   LL+E+LP L +A+
Sbjct: 183 RGFKPVYWSPSSQTALAEAELEYPEGHTSRSIYVTFKVTGLSETAQPLLDEYLPTLKVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AV++N  L YAVV+                           + ++IVA
Sbjct: 243 WTTTPWTIPGNLAVSLNPDLTYAVVKA-------------------------GEDYLIVA 277

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
            DLV TL     +   + KTL G  LEN  Y HP+  R+ P+V+ GDY+TTESGTGLVHT
Sbjct: 278 EDLVETLTETLESSFKVIKTLPGKALENSTYQHPLFEREGPLVL-GDYVTTESGTGLVHT 336

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDY    +YGL +LSPVD +G FT+EAG F+GL+VL  GN AV++ L    +L+
Sbjct: 337 APGHGQEDYQVGQQYGLAMLSPVDGDGTFTDEAGPFAGLNVLNGGNEAVIEALQSAGALL 396

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EE Y HKYPYDWRTKKP I RATEQWFASV+GFR+A +DAI  V W+P Q
Sbjct: 397 KEESYAHKYPYDWRTKKPVILRATEQWFASVDGFREAVLDAIATVNWIPAQ 447



 Score =  287 bits (735), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/339 (46%), Positives = 221/339 (65%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY  DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQDPPYGADVLRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQD 685

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +++Y+DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 AVAYEDLPQLDRYMLHRITEVFTDVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     +  RRSCQTVL+  L ++ R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 746 LYISEPNAQRRRSCQTVLAIALENLARAIAPVLSHMAEDIWQSLPYE------TEHQSVF 799

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
            S W  L+++W    +     W  + E+R EVNKVLE ART K IGSSLEAKV L+  D 
Sbjct: 800 ASGWMRLEDQWHNPDLAS--HWIVLREIRQEVNKVLEQARTEKEIGSSLEAKVLLYVSDT 857

Query: 775 SLASRLREMCTA----KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
            L  +L  M  +     ++ D L+ +F+ SQVE+L  TP  L R + Y  +    G    
Sbjct: 858 DLRQQLDAMNPSTGGGSNNVDELRYLFLASQVELL-ETPKNLDR-LMYQFQSETLG---- 911

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            +GV  A+G KC+RCWNYST VG   +HP LC RC  ++
Sbjct: 912 -VGVVTADGKKCDRCWNYSTYVGRSKQHPLLCDRCEPII 949


>sp|Q8DGI7|SYI_THEEB Isoleucine--tRNA ligase OS=Thermosynechococcus elongatus (strain
           BP-1) GN=ileS PE=3 SV=2
          Length = 953

 Score =  504 bits (1299), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 251/467 (53%), Positives = 304/467 (65%), Gaps = 57/467 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+TTF MRANA  REP++   W  H+++  +   N GE F+LHDGPPYANG L
Sbjct: 8   YKDTVNLPQTTFEMRANAATREPQLQAFWAQHKIYETLQQTNPGEVFILHDGPPYANGAL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+Y+LL+  KV Y PGWDCHGLPIELKVLQ+L  + +  LTP  LR
Sbjct: 68  HIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNLKPEQRAQLTPLTLR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            +A +FA  TV  Q  SF+RYGVW DW +PYLTL P+YEAAQ                  
Sbjct: 128 QQAKEFALKTVAEQKQSFQRYGVWGDWAHPYLTLTPDYEAAQIGVFGEMVLRGYIYRGLK 187

Query: 268 ------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 309
                             YPEGH SRS+YA F ++  P   +      L  LG+A+WTTT
Sbjct: 188 PVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTT 247

Query: 310 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 369
           PWT+PAN AV+VN  L YA+VE+Q                       ++   +IVA DLV
Sbjct: 248 PWTIPANLAVSVNPDLTYALVEVQP---------------------SERYKHLIVAKDLV 286

Query: 370 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 429
             L    G  L +  T  G+DLE+ RY HP+  R+  ++IGGDY+TTESGTGLVHTAPGH
Sbjct: 287 ERLSDTLGRTLKVVATAKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGH 346

Query: 430 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 489
           G EDY    +YGLPILSPVD+ G FT EAG F+GL+VL +GN AV+  L E  +L+ EEP
Sbjct: 347 GLEDYGVGQRYGLPILSPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEP 406

Query: 490 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
           Y HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI +VKW+P Q
Sbjct: 407 YVHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALRAIAEVKWIPAQ 453



 Score =  314 bits (805), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 163/339 (48%), Positives = 217/339 (64%), Gaps = 21/339 (6%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY  DV IG  +LRQ++D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQDPPYGADVLRLWVSSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQD 686

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
            I Y  LP +D+Y L +L  +   +  +++S+QF++ FQ IQ   +VDLSNFY D+AKDR
Sbjct: 687 MIPYAQLPALDRYMLHRLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDR 746

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY    T   RRSCQTVL+  L ++ R IAP+LPHLAED+WQ+LPF       +    VF
Sbjct: 747 LYISAATGDRRRSCQTVLAIALQNLARAIAPVLPHLAEDIWQHLPFK------TPYLSVF 800

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           +S W  L  +W+   +     W ++ +LR EVNKVLE AR  KLIGSSLEAKV+L+  D+
Sbjct: 801 QSGWVQLSAQWQDNALAA--EWQRLRQLRLEVNKVLEKARAEKLIGSSLEAKVWLYVADS 858

Query: 775 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
               RL +M      + +  D L+ +F++SQVE++P  P  +  ++PY  E   EG   +
Sbjct: 859 EWRDRLAQMNPRDALSGNGVDELRYLFLVSQVELMPQ-PQAV--DVPYVLE--AEG---L 910

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           WIGV  A+G KC RCWNYS  VG    HP LC RC   L
Sbjct: 911 WIGVGHAQGEKCVRCWNYSESVGQSALHPQLCDRCQAAL 949


>sp|Q5N1G1|SYI_SYNP6 Isoleucine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 /
           PCC 6301 / SAUG 1402/1) GN=ileS PE=3 SV=1
          Length = 954

 Score =  491 bits (1264), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/472 (52%), Positives = 306/472 (64%), Gaps = 63/472 (13%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK T++L +T F MRANA VREPEI + W D Q++  ++ +N G  FVLHDGPPYA
Sbjct: 3   EVSAYKDTLNLLQTPFNMRANAPVREPEIQQFWADRQIYETLSRQNPGAPFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNK LKDIIN+Y+LLQ  KVRYVPGWDCHGLPIELKVLQ L  + +++LTP
Sbjct: 63  NGALHMGHALNKTLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQELSSEERRNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
             LR KA  +A A V+ Q  SF+RYGVWADW+ PYLTL PEYEAAQ              
Sbjct: 123 LTLRQKAKAYALAQVEQQSQSFQRYGVWADWDAPYLTLTPEYEAAQIDVFGQMVLKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YP+GH SRSIY    +V    +   LL  +  +L LA+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNY-ANLALAI 241

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+PAN AVAVN +L YAVV+      GD                      +IVA
Sbjct: 242 WTTTPWTIPANLAVAVNGELTYAVVQA-----GD--------------------CHLIVA 276

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           ++L  +L   + T+L +  T  GS LE+ RY HP+ +R+ PVVIGGDYITTESGTGLVHT
Sbjct: 277 AELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHT 336

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSL 484
           APGHGQ+D++   +YGL +  PVDD+G FT   G +  G +VL D N AV+++L E  +L
Sbjct: 337 APGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGAL 396

Query: 485 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
           + EE Y H+YPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI +V W+P Q
Sbjct: 397 LKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQALQAIAEVDWIPAQ 448



 Score =  277 bits (709), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 216/339 (63%), Gaps = 20/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQMADVYRKIRNTARFLLGNLHDFDPAKD 686

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           ++ ++ LP +D+Y L +L  ++  I++++ES+QFF+ FQ +Q F +VDLSNFY D+ KDR
Sbjct: 687 ALPWEKLPELDRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDR 746

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     S  RRSCQTVL+  + ++   IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 747 LYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYP------ARTKSVF 800

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD- 773
           ++ W  L + W    +     W ++ +LR+EVNKVLE AR  + IGSSLEAK+ L+  D 
Sbjct: 801 QAGWVQLQDDWNQPELAAK--WQQLRDLRSEVNKVLEQARRDQAIGSSLEAKLQLWVADS 858

Query: 774 ---ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 830
              A+LA R      +    D L+ +F++SQVE L   P GL        +Y  + +D  
Sbjct: 859 DWRAALADRNPADSLSGTAVDDLRYLFLVSQVE-LRDQPTGLT-----EAKYHAQTEDWA 912

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            I V  AEG KC+RCWNYST VG   EHP LC RC   L
Sbjct: 913 -IAVVDAEGQKCDRCWNYSTTVGQSSEHPDLCDRCVSAL 950


>sp|Q7U9G9|SYI_SYNPX Isoleucine--tRNA ligase OS=Synechococcus sp. (strain WH8102)
           GN=ileS PE=3 SV=1
          Length = 974

 Score =  470 bits (1209), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/481 (49%), Positives = 304/481 (63%), Gaps = 73/481 (15%)

Query: 103 EGR--YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           EGR  YK T++L +T FGMRANA+ REPE+   W D+ +  ++  +NDG  F LHDGPPY
Sbjct: 11  EGRPSYKDTLNLLQTGFGMRANAVKREPELQAFWSDNGIDGQLGLQNDGPTFTLHDGPPY 70

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG LHMGHALNK+LKD+IN+Y++L+  +VRYVPGWDCHGLPIELKVLQS+D++ +K LT
Sbjct: 71  ANGALHMGHALNKVLKDVINKYQVLKGRRVRYVPGWDCHGLPIELKVLQSMDQEQRKALT 130

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------- 267
           P KLR KAA +A+  V  QM  F+R+G+WADW  PYLTL  EYEAAQ             
Sbjct: 131 PIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYEAAQIKVFGEMVLKGHI 190

Query: 268 -----------------------YPEGHVSRSIYAVFRMVSAP-PSTSGLLNEFLP---- 299
                                  YP+GH S S+Y  F  +  P P    L  E L     
Sbjct: 191 YRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAMEVPTPLRDALKAEGLELPTE 250

Query: 300 ------DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 353
                  L +A+WTTTPWT+PAN AV+VN +L YA+V+                      
Sbjct: 251 TDALRQALQVAIWTTTPWTLPANLAVSVNERLDYALVD---------------------- 288

Query: 354 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 413
             D     ++VA+DL+ +L       L  + T+ G+ L    Y HP+ +R  PVVIGG+Y
Sbjct: 289 --DGSGRMLVVAADLIESLSTTLERPLKHRATVKGALLAGLIYRHPLLDRTSPVVIGGEY 346

Query: 414 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 473
           ITTESGTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG F+GL+VL D N  
Sbjct: 347 ITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPG 406

Query: 474 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 533
           +++ L++  +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI QV+W 
Sbjct: 407 IIEALEQAGALLKQEAYSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWT 466

Query: 534 P 534
           P
Sbjct: 467 P 467



 Score =  269 bits (688), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 210/341 (61%), Gaps = 29/341 (8%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPASD 707

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +I+  DLP++D++ L +   ++  I E++ESY+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIAVADLPLLDRWMLQRTAEVMHEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY    T   RRSCQTV++  +  +   IAP+L H+AED+WQNLP  Y +++ S    VF
Sbjct: 768 LYVSAPTDQRRRSCQTVMALIIERLAGFIAPVLCHMAEDIWQNLP--YPVQETS----VF 821

Query: 715 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 770
           +  WP +   WR    + PV ++       +LR  VNKVLE  R  + +G+SLEA V + 
Sbjct: 822 QRGWPTIPSDWRNDTLSAPVQQLR------DLRAAVNKVLEDCRGRQELGASLEAAVRID 875

Query: 771 TDDASLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 829
                L + L  +      D D L+   ++SQ++         +   P++ E L   +D+
Sbjct: 876 ARSPELQAALSWLNDNGDPDVDGLRDWLLVSQLQ---------LGGEPWA-EVLSNHEDE 925

Query: 830 V-WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           +  I VSRA G+KCERCW+Y   VG   +H  +C RC  VL
Sbjct: 926 LALIEVSRARGTKCERCWHYEGDVGQHPDHAHICGRCVGVL 966


>sp|Q7VDV0|SYI_PROMA Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
           CCMP1375 / SS120) GN=ileS PE=3 SV=1
          Length = 969

 Score =  460 bits (1184), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/496 (47%), Positives = 300/496 (60%), Gaps = 81/496 (16%)

Query: 90  MAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG 149
           M  +K  +G  +    YK +++L KT+F MRANA+VREPE+ + W +  +   +   N G
Sbjct: 1   MNHEKTNDGNNRPS--YKESLNLLKTSFSMRANAIVREPELQQFWKEKGIDFELGLANKG 58

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
             F LHDGPPYANGNLHMGHALNKILKDIIN+Y++L+  KVR+VPGWDCHGLPIEL+VL+
Sbjct: 59  STFTLHDGPPYANGNLHMGHALNKILKDIINKYQILKGSKVRFVPGWDCHGLPIELQVLK 118

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-- 267
           +LD   ++DLTP KLR KAA +A   +  Q   F+R+G+WADW+NPYLTL  EYEAAQ  
Sbjct: 119 TLDRKEREDLTPIKLRKKAAAYAHKQIALQKDGFRRWGIWADWDNPYLTLQKEYEAAQIK 178

Query: 268 ----------------------------------YPEGHVSRSIYAVFRMVSAPPSTSGL 293
                                             YPEGH S SIY  F +V  P     L
Sbjct: 179 LFGEMAFKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSPSIYVAFSVVKLP----NL 234

Query: 294 LNEFLPDLGLA---------------VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEG 338
           L E L   GLA               +WTTTPWT+PAN AVAVN  + Y +         
Sbjct: 235 LQESLSKQGLALPVHEDGLSNKLKVAIWTTTPWTLPANMAVAVNENIDYIIA-------- 286

Query: 339 DSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH 398
                           KD  +  +I+ASDL   +  + G+ L     + G  L+   Y H
Sbjct: 287 ----------------KDNSEKLLIIASDLREIVSEEIGSPLEKVAIVKGKMLDGVLYKH 330

Query: 399 PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA 458
           P+ +   P V+GG+YITTESGTG+VHTAPGHG +D+ T +KY LPI+ PVD++G FT EA
Sbjct: 331 PLFDSLNPFVLGGNYITTESGTGIVHTAPGHGVDDFNTGMKYKLPIICPVDEKGFFTSEA 390

Query: 459 GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG 518
           G F GL+VL D N  ++  L E   L+ E+PY HKYPYDWRTKKPTIFRATEQWFASVEG
Sbjct: 391 GDFEGLNVLKDANTKIINALKESGCLLKEKPYIHKYPYDWRTKKPTIFRATEQWFASVEG 450

Query: 519 FRQAAMDAIGQVKWVP 534
           FR  A+++I +V+W+P
Sbjct: 451 FRNDALNSIEKVEWLP 466



 Score =  269 bits (687), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 201/333 (60%), Gaps = 19/333 (5%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L Q+SD+YRK+R T RYLLGNLHD+    + + 
Sbjct: 650 PAYGADVLRLWVSSVDYSVDVPIGNNILSQLSDVYRKVRNTARYLLGNLHDFDPAKDGLD 709

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
             DLP++D++ L +  ++V  I  ++E Y+F K FQ++Q F +VDLSNFY D+AKDRLY 
Sbjct: 710 IGDLPILDRWMLNRTADVVDEISIAFERYEFSKFFQLLQSFCVVDLSNFYLDIAKDRLYV 769

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
                F RRSCQ VLS  +  +  VI+P+L H AED+WQN+P+          E VF+  
Sbjct: 770 SAPNDFRRRSCQYVLSLIVERLAGVISPVLSHTAEDIWQNIPYKLN------EESVFQRY 823

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP + + WR     +     +I ELRT VN+ LE  RT + +GSSLEA V +   + SL 
Sbjct: 824 WPKVPDSWRDSSFNKPI--NQIRELRTSVNRALEDCRTRQELGSSLEASVRISPINESLQ 881

Query: 778 SRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 836
           + L  +    H++ D L    I+S+V+         I   P++     +  D   I +++
Sbjct: 882 NSLTFLQENGHNSVDNLFDWLIVSKVQ---------IGGEPWAEVLFTKEDDIGVIEIAK 932

Query: 837 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           + G+KCERCW+Y   +G +  HP LC RC +++
Sbjct: 933 SRGAKCERCWHYELDIGQYERHPLLCGRCVDII 965


>sp|Q7TUN3|SYI_PROMM Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9313) GN=ileS PE=3 SV=1
          Length = 968

 Score =  459 bits (1181), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/476 (48%), Positives = 300/476 (63%), Gaps = 71/476 (14%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T+FGMRANA  REPE+ + W    + L +   N G+NF LHDGPPYANG L
Sbjct: 15  YKDTLNLLQTSFGMRANASQREPELQEFWKQQGIDLELGLNNQGQNFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN++++L+  +VR+VPGWDCHGLPIELKVLQ+L+++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHQILRGRQVRFVPGWDCHGLPIELKVLQNLNQEQREALTPLKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            KAA FA+  V +QMA F+R+G+WADW +PYLTL  EYEAAQ                  
Sbjct: 135 KKAAAFARKQVDSQMAGFRRWGIWADWEHPYLTLQKEYEAAQIQVFGKMFQKGYIYRGLK 194

Query: 268 ------------------YPEGHVSRSIYAVFRMVSAPP---STSGLLNEFLPDLGL--- 303
                             YP+GH S S+Y  F     P    ++ G     LP+ GL   
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAAKLPEKLRTSLGNQGLELPNNGLELG 254

Query: 304 -----AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 358
                A+WTTTPWT+PAN AV+VN KL Y+                           D +
Sbjct: 255 QALQIAIWTTTPWTLPANLAVSVNEKLDYSFA------------------------VDNQ 290

Query: 359 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 418
              ++VA++L+P+L      +L  + T+ G+ L    Y HP+ +R  P+VIGG+YITTES
Sbjct: 291 GRLLLVAAELLPSLRDTLALELTARATVKGALLAGLIYKHPLLDRDSPIVIGGEYITTES 350

Query: 419 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 478
           GTGLVHTAPGHG +D+ T  K+ L +L PVD+ G  T EAG F+GL+VL D N  ++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGQKHDLGMLCPVDESGTMTSEAGPFAGLNVLKDANPTIIAAL 410

Query: 479 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           +E+ +L+  EPY H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 EERGALLKHEPYAHRYPYDWRTKKPTIFRATEQWFASVEGFRNEALTAINSVEWLP 466



 Score =  255 bits (652), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 203/339 (59%), Gaps = 19/339 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPPYGADVLRLWVSSVDYSADVPIGASILRQIADVYRKVRNTSRYLLGNLHDFDPERD 706

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +I   +LP++D++ L +   ++  I  +++ Y+F++ FQ++Q + +VDLSNFY D+AKDR
Sbjct: 707 AIPVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDR 766

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY    +   RRSCQT ++  +  +   I+P+L H+AED+WQNLP++       A + VF
Sbjct: 767 LYVSSPSERRRRSCQTAMALIIERLAGAISPVLCHMAEDIWQNLPYSV------AEDSVF 820

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
              WP + E WR   +  +    ++ ELR+ VN+VLE  R+   +G++LEA V L     
Sbjct: 821 RRGWPTVPETWRDPSM--MAPMHQLRELRSAVNRVLEDCRSQGELGAALEAAVRLEAHSE 878

Query: 775 SLASRLREM-CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 833
           +L   L  +      D D L+   ++S ++V            P++     +      I 
Sbjct: 879 ALQEALDWLRQQGDPDVDGLRDWLLVSHLQV---------GGEPWAELLASQDNALATIE 929

Query: 834 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 872
           V+RA GSKCERCW+Y T VG    HPTLC RC  VL  Q
Sbjct: 930 VARARGSKCERCWHYETDVGQHTTHPTLCGRCVGVLEHQ 968


>sp|Q0IDA5|SYI_SYNS3 Isoleucine--tRNA ligase OS=Synechococcus sp. (strain CC9311)
           GN=ileS PE=3 SV=1
          Length = 968

 Score =  455 bits (1171), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/476 (47%), Positives = 296/476 (62%), Gaps = 71/476 (14%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T FGMRANA+ REPE+   W +  + L +   N G  F LHDGPPYANG L
Sbjct: 15  YKDTLNLLETGFGMRANAIHREPELQAFWKEKGIDLDLGRNNPGPVFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+++L+Q  KVR+VPGWDCHGLPIELKVLQ+++++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHRLMQGRKVRFVPGWDCHGLPIELKVLQAMNQEQRQALTPIKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            KAA +A   V  Q A F+R+G+WADW++PYLTL  +YEAAQ                  
Sbjct: 135 KKAAAYAHKQVAGQRAGFQRWGIWADWDHPYLTLQKDYEAAQIDVFGTMALKGHIYRGLK 194

Query: 268 ------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--------- 300
                             YP+GH S S+Y  F +V  P S    LN    D         
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVGFPVVDLPESLRSKLNAQGLDVPAASDTLS 254

Query: 301 --LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 358
             L +A+WTTTPWT+PAN AV+VN +L Y + +                        D  
Sbjct: 255 QCLQVAIWTTTPWTLPANLAVSVNDRLDYCLAD------------------------DGN 290

Query: 359 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 418
              +IVA++L  ++ +K    L  K T+ G+DL    Y HP+  R+  +V+GG+YITTES
Sbjct: 291 GQLLIVAAELCDSIASKLERPLQAKATVKGADLAGITYSHPLLERRSAIVVGGEYITTES 350

Query: 419 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 478
           GTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG F GL+VL D N  ++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTAEAGPFEGLNVLKDANAKIIAAL 410

Query: 479 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           ++  SL+++E Y H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 EDSGSLLLQESYSHRYPYDWRTKKPTIFRATEQWFASVEGFRTEALTAIDGVQWLP 466



 Score =  258 bits (660), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/336 (42%), Positives = 206/336 (61%), Gaps = 19/336 (5%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 594
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ+SD+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFIPSRD 706

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           +IS  DLP++D++ L +   ++  I E++E Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AISISDLPLLDRWMLQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDR 766

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQN+P+       +  E VF
Sbjct: 767 LYVSAPNDKRRRSCQTVMALIIERLAAAIAPVLCHMAEDIWQNIPYP------TGTESVF 820

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
            S WP + E+WR   + +     ++ ELR  VNKVLE  R+ + +GSSLEA V L     
Sbjct: 821 LSGWPSVPEEWRDDSLRDPM--QELRELRAAVNKVLEECRSKRKLGSSLEAAVRLEARTP 878

Query: 775 SLASRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 833
           +L   L+ + +    + D L+   ++SQ++         I   P++     +  +   I 
Sbjct: 879 ALQDALQWLQSKGDQEVDGLRDWLLVSQLQ---------IGGEPWAELLASDDNELAVIE 929

Query: 834 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           V+ + G KCERCW+Y   +G + +HP LC RC  VL
Sbjct: 930 VALSRGQKCERCWHYEADIGQYSDHPGLCGRCVSVL 965


>sp|A9BDK6|SYI_PROM4 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9211) GN=ileS PE=3 SV=1
          Length = 969

 Score =  443 bits (1140), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/490 (46%), Positives = 291/490 (59%), Gaps = 71/490 (14%)

Query: 92  AKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN 151
            K+  +GE+     YK +++L KT+FGMRANA +REPE+   W D  + L +   N G +
Sbjct: 2   TKETRQGEQNRPS-YKESLNLLKTSFGMRANATLREPELQNFWADKGIDLELGLANKGPS 60

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG LHMGHALNK+LKDIIN++ +++ +KV +VPGWDCHGLPIELKVLQ+L
Sbjct: 61  FTLHDGPPYANGALHMGHALNKVLKDIINKFHIMRGHKVHFVPGWDCHGLPIELKVLQTL 120

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---- 267
               ++ LTP +LR KAA +A   VK QM  FKR+G+W +WN PYLTL  EYE+AQ    
Sbjct: 121 SNKERQALTPIQLRKKAAAYASKQVKGQMEGFKRWGIWGNWNKPYLTLQKEYESAQVKLF 180

Query: 268 --------------------------------YPEGHVSRSIYAVFRMVSAPPSTS---- 291
                                           YPE H S S+Y  F ++  P S S    
Sbjct: 181 GQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPEAHTSPSVYVAFSVIHLPQSLSENLI 240

Query: 292 -------GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 344
                  G   E    L + +WTTTPWT+PANAAV+VN+ L Y+ V              
Sbjct: 241 KQGLELPGDEVELSKRLKVCIWTTTPWTLPANAAVSVNSNLDYSFVR------------- 287

Query: 345 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 404
                      ++K   +I A++L+  +    G          G  L+   Y HP+  R 
Sbjct: 288 ----------HEEKGQILIFATELLEEVSEILGISFKQVANAKGESLKGILYKHPLYERT 337

Query: 405 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 464
            P+V+GG YITT+SGTGLVHTAPGHG +D+ T L+  L +  PVD++G FT EAGKF GL
Sbjct: 338 APIVLGGSYITTQSGTGLVHTAPGHGIDDFKTGLQNNLEVFCPVDEKGIFTSEAGKFEGL 397

Query: 465 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 524
           +VL D N  ++  L+   SL+ E PY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+
Sbjct: 398 NVLKDANKEIISSLEISGSLLKELPYVHKYPYDWRTKKPTIFRATEQWFASVEGFREDAL 457

Query: 525 DAIGQVKWVP 534
            AI  V+W+P
Sbjct: 458 KAIDDVEWLP 467



 Score =  270 bits (691), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 202/333 (60%), Gaps = 19/333 (5%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNLHD+    NS+ 
Sbjct: 651 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTSRYLLGNLHDFDPKKNSVD 710

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D+LP++D++ L +   ++  I  ++E Y+F + FQ++Q F  VDLSNFY D+AKDRLY 
Sbjct: 711 IDNLPILDKWMLNRTAEVIDEITLAFEKYEFSRFFQLLQSFCTVDLSNFYLDIAKDRLYV 770

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
                  RR+CQTV++  +  +  +I+P+L H+AED+WQN+P+  +       E VF+  
Sbjct: 771 SAPDDPRRRACQTVMALIIEKLAGLISPVLCHMAEDIWQNIPYQLS------EESVFKRG 824

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WPV    W+   + E      I ELRT VN+VLE  R  + +GSSLEA + L   +  L 
Sbjct: 825 WPVSPSNWKRASLTEPI--SLIRELRTSVNRVLEGCRNRQELGSSLEAGLRLEITNQGLL 882

Query: 778 SRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 836
             +  +     HD D ++  F++SQ++         I   P++   + +  +   I +S 
Sbjct: 883 DAIDFLAKNGDHDVDCIRDWFLVSQLQ---------IGGEPWAEVLISQQFELGVIEISN 933

Query: 837 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           A G KCERCW+Y   +GS  EHPTLC RC  V+
Sbjct: 934 ARGYKCERCWHYEQDIGSCSEHPTLCGRCVTVM 966


>sp|Q46HD5|SYI_PROMT Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
           GN=ileS PE=3 SV=1
          Length = 967

 Score =  442 bits (1138), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/481 (47%), Positives = 294/481 (61%), Gaps = 70/481 (14%)

Query: 100 KKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPP 159
           +K+   YK T++L +T FGMRANA +REPE+   W +  +   +   N GE F LHDGPP
Sbjct: 9   QKDRPTYKDTLNLLQTNFGMRANATLREPELQAFWREKNIDFELGLNNSGETFTLHDGPP 68

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG LHMGHALNK+LKDIIN+++ ++  KV YVPGWDCHGLPIELKVLQ++D+  + +L
Sbjct: 69  YANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQAMDKSQRAEL 128

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------ 267
           TP KLR KAA +AK  V  QM  FKR+GVW DW+ PYL+LD ++EA+Q            
Sbjct: 129 TPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVFKGY 188

Query: 268 ------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL-- 301
                                   YP GH S+SIY  F++   P   +  +++  PDL  
Sbjct: 189 IYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLIN 248

Query: 302 --------GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 353
                    L +WTTTPWT+PAN A++VN KL+Y + +                      
Sbjct: 249 SEGKLKELKLVIWTTTPWTIPANEAISVNQKLEYVIAQ---------------------- 286

Query: 354 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 413
                +  II+A+DL+  +    G     +  + GS L+   Y HP+ ++  PVV+GGDY
Sbjct: 287 --SSDRSLIIIANDLLQEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLGGDY 344

Query: 414 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 473
           ITTESGTGLVHTAPGHG +D+ T+ KY L I  PVD++G  T+EAGKF GL+VL D N  
Sbjct: 345 ITTESGTGLVHTAPGHGVDDFNTAKKYNLSISCPVDEKGFLTKEAGKFEGLNVLKDANSV 404

Query: 474 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 533
           ++  L    SL+ E PYEH+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+
Sbjct: 405 IISDLINAGSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDVIWL 464

Query: 534 P 534
           P
Sbjct: 465 P 465



 Score =  261 bits (666), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 206/333 (61%), Gaps = 19/333 (5%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP + + W+           ++ +LR  +N++LE  R  + +GSSLEA V +   D  + 
Sbjct: 823 WPNVPKSWKNSSFN--CHVTELRKLRAVINRMLESCRNNQALGSSLEASVRVDISDEKVK 880

Query: 778 SRLREMCTAK-HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 836
           + +  +  ++ ++ D L+  F++S ++         I   P++   + E  D   + +++
Sbjct: 881 AAIEWLAESESNNVDVLRDWFLVSSLQ---------IGGEPWAEVLVSEDNDYASVEIAK 931

Query: 837 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           A G KCERCW+Y  ++    +H  +C RC +V+
Sbjct: 932 ARGFKCERCWHYEIEMSKNPQHTNICKRCEKVV 964


>sp|Q7NF75|SYI_GLOVI Isoleucine--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421)
           GN=ileS PE=3 SV=1
          Length = 983

 Score =  437 bits (1123), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/505 (46%), Positives = 293/505 (58%), Gaps = 101/505 (20%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV  PKT F MRANA  RE EI + W++  ++ R+A +N GE F+LHDGPPYANG L
Sbjct: 8   YKQTVRTPKTDFPMRANASTREVEIQRFWEEQGIYGRLAQENPGEIFILHDGPPYANGEL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIINRY+LLQ  +VRYVPGWDCHGLPIELKVLQ L +  +  LTP  +R
Sbjct: 68  HVGHALNKILKDIINRYQLLQGRRVRYVPGWDCHGLPIELKVLQDLSQAERSQLTPLDVR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------ 267
            +A  FA+ TV++Q AS+KR+GVW DW++PYLTL PEYEAAQ                  
Sbjct: 128 TRARDFAQRTVQSQCASYKRFGVWGDWDHPYLTLQPEYEAAQLGVFGKMALKGYIYRGLK 187

Query: 268 ------------------YPE------GHVSRSIYAVFRMVS-APPSTS----------- 291
                             YP        H SRS+Y  F ++S A P T+           
Sbjct: 188 PVHWSPSSQTALAEAELEYPTKDDGSPAHTSRSVYVKFPLISIAAPETATVMAAELLPRL 247

Query: 292 ------------GLLNEF--LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLE 337
                        LL E   LP++ +A+WTTTPWT+P N AVA+N +L YA+V       
Sbjct: 248 SAFHDREEELIDALLGERDDLPEIAVAIWTTTPWTLPGNLAVALNGELDYALV------- 300

Query: 338 GDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYV 397
                               +   +IVA++LV  L     T+     T  G +LE     
Sbjct: 301 -----------------ASDEHGLLIVAAELVERLAGTLATRFETIATFRGRELEGSLLA 343

Query: 398 HPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEE 457
           HP+  R  P+V+ GD++TTESGTG VHTAPGHG ED+  + +Y L +LSPVDD G+FT E
Sbjct: 344 HPLFRRTSPIVL-GDHVTTESGTGAVHTAPGHGSEDFELAQRYNLGVLSPVDDYGRFTRE 402

Query: 458 AGK--------FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRAT 509
           A          F+G  VL DGN AV++ L    +L+ EE Y HKYPYDWRTKKPTIFRAT
Sbjct: 403 ADSDRRENLPVFAGKAVLSDGNQAVIEALSAAGALLKEEAYVHKYPYDWRTKKPTIFRAT 462

Query: 510 EQWFASVEGFRQAAMDAIGQVKWVP 534
            QWFASV  FR  A+ AI Q +W+P
Sbjct: 463 TQWFASVSDFRPQALSAIAQTEWIP 487



 Score =  294 bits (753), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/336 (47%), Positives = 206/336 (61%), Gaps = 27/336 (8%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 595
           ++ P YGADVLRLWV+SVDYT D ++GP VL Q++++YRK+R T RYLLG+L+D+     
Sbjct: 671 KQHPAYGADVLRLWVASVDYTSDQLVGPSVLAQIAEVYRKIRNTARYLLGSLNDFVPERD 730

Query: 596 -ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
            +++D L  +DQY L +L  +   + +++ESYQF + FQ IQ F + DLSNFY D++KDR
Sbjct: 731 LVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQNFCVADLSNFYLDISKDR 790

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY     S  RRSCQTVL   L S+ R+IAP+LPHLAED+WQ+LP  Y   D S    VF
Sbjct: 791 LYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQHLP--YPRSDAS----VF 844

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           E+ WPV   +W  F    +  W  ++ LR  VN  LE AR  K IGSSLEAK+ L  +D 
Sbjct: 845 EAGWPVDHSQW--FQPLTVDRWPGLIVLRDRVNIALEAARNAKRIGSSLEAKIRLHVEDP 902

Query: 775 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 834
           +L   L          D L+ +FI+SQVE+L   P           E  VE  +   + V
Sbjct: 903 ALTDEL------ARQKDELRYLFIVSQVELLDELP----------AEVSVE--EGAAVIV 944

Query: 835 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
             A+G KCERCWNYS  VG   EHPTLC RC   LA
Sbjct: 945 LDADGQKCERCWNYSVHVGEDAEHPTLCERCVSALA 980


>sp|A2C071|SYI_PROM1 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain NATL1A)
           GN=ileS PE=3 SV=1
          Length = 967

 Score =  436 bits (1122), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/484 (46%), Positives = 292/484 (60%), Gaps = 70/484 (14%)

Query: 97  EGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHD 156
           +  +K+   YK T++L +T FGMRANA +REPE+   W +  +   +   N GE F LHD
Sbjct: 6   KNSQKDRPTYKDTLNLLQTNFGMRANATLREPELQAFWREKNIDFELGLNNTGETFTLHD 65

Query: 157 GPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAK 216
           GPPYANG LHMGHALNK+LKDIIN+++ ++  KV YVPGWDCHGLPIELKVLQ++D+  +
Sbjct: 66  GPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQAMDKSQR 125

Query: 217 KDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ--------- 267
            +LTP KLR KAA +AK  V  QM  FKR+GVW DW+ PYL+LD ++EA+Q         
Sbjct: 126 AELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVF 185

Query: 268 ---------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD 300
                                      YP GH S+SIY  F++   P   +  +++  PD
Sbjct: 186 KGYIYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPD 245

Query: 301 L----------GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 350
           L           L +WTTTPWT+PAN A++VN KL+Y + +                   
Sbjct: 246 LINSEGKLKEVKLVIWTTTPWTIPANEAISVNQKLEYVIAQ------------------- 286

Query: 351 GNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIG 410
                   +  II+A+DL+  +    G     +  + GS L+   Y HP+ ++  PVV+G
Sbjct: 287 -----SSDRSLIIIANDLLDEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLG 341

Query: 411 GDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDG 470
           GDYITTESGTGLVHTAPGHG +D+ T  KY L I   VD +G  T+EAGK+ GL+VL D 
Sbjct: 342 GDYITTESGTGLVHTAPGHGVDDFNTGKKYNLSISCTVDAKGFLTKEAGKYEGLNVLKDA 401

Query: 471 NVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQV 530
           N  ++  L    SL+ E PYEH+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V
Sbjct: 402 NSVIISDLINSGSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDV 461

Query: 531 KWVP 534
            W+P
Sbjct: 462 IWLP 465



 Score =  262 bits (670), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 206/333 (61%), Gaps = 19/333 (5%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP + + WR           ++ +LR  +N++LE  R  + +GSSLEA V +   D  + 
Sbjct: 823 WPNVPKSWRNSSFN--CHVTELRKLRAVINRMLESCRNNQALGSSLEASVRVDISDEKVQ 880

Query: 778 SRLREMCTAK-HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 836
           + +  +  ++ ++ D L+  F++S ++         I   P++   + E  D   + +++
Sbjct: 881 AAIEWLAESESNNVDVLRDWFLVSSLQ---------IGGEPWAEVLVSEDNDYASVEIAK 931

Query: 837 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           A G KCERCW+Y  ++    +H  +C RC +V+
Sbjct: 932 ARGFKCERCWHYEIEMSKNPQHTNICKRCEKVV 964


>sp|Q7V352|SYI_PROMP Isoleucine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
           (strain CCMP1986 / MED4) GN=ileS PE=3 SV=1
          Length = 965

 Score =  433 bits (1114), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/487 (45%), Positives = 291/487 (59%), Gaps = 69/487 (14%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     EKK    YK T++L KT F MRAN+++REPEIH+ W  +++ L +   N G+NF
Sbjct: 2   KSKHNKEKKSGFSYKETLNLLKTDFSMRANSVIREPEIHEFWSRNKIDLELGSTNSGKNF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LHMGHALNK+LKDIIN+YK LQ +KV ++PGWDCHGLPIELKVLQSL 
Sbjct: 62  TLHDGPPYANGSLHMGHALNKVLKDIINKYKTLQGFKVHFIPGWDCHGLPIELKVLQSLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----- 267
            + +++L    LR KA  +AK  +  Q+  FKR+G+W DW+NPYLTL   YE+AQ     
Sbjct: 122 SNERRNLDSLGLRKKATDYAKIQINNQLEGFKRWGIWGDWDNPYLTLKKNYESAQIGVFG 181

Query: 268 -------------------------------YPEGHVSRSIYAVFRMVSAPPST------ 290
                                          YPE H S+SIY    +     +       
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPEEHFSKSIYVSLNITKLSDAVLLKLEE 241

Query: 291 SGLLNEFLPDLG---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 347
             L N+ L  L    +A+WTTTPWT+P N AVA+N ++ Y     Q+             
Sbjct: 242 KDLRNKLLSSLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFASDQN------------- 288

Query: 348 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 407
              GN+         + A DL+  +  K   +  +   + GS LE   Y HP  N+ C +
Sbjct: 289 ---GNIY--------LFARDLISEICEKLDREFNVLLDVKGSLLEGLEYKHPTKNKFCNI 337

Query: 408 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 467
           VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   + A KF GL+VL
Sbjct: 338 VIGGDYITTESGTGIVHTAPGHGMDDFNVGQKYQLPITCIVDEKGNLNKHAEKFCGLNVL 397

Query: 468 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 527
            D N  +++ L++   L+++E Y+H+YPYDWRTKKPTIFRATEQWFASVEGFR +A+ AI
Sbjct: 398 KDANDLIIEDLEKNNLLLLKENYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSALKAI 457

Query: 528 GQVKWVP 534
             V+W+P
Sbjct: 458 EDVEWMP 464



 Score =  251 bits (642), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 197/335 (58%), Gaps = 19/335 (5%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+      I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPALEEID 707

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D LP++DQ+ L +L  +   +  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLNRLVEVSDEVTIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              T F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++ T+E       VFE +
Sbjct: 768 SAKTQFRRRSCQFVMSRIVENLAVIISPVLCHMAEDIWQNIPYS-TIEKS-----VFERR 821

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP   E W    + E      +  LR E+NK +E  RT ++IG++LE +V    ++    
Sbjct: 822 WPKFPESWLNPELNEHI--SNLRTLRVEINKAIEGCRTQQMIGAALETEVNYLPENEFFK 879

Query: 778 SRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 836
           + L  +      + D  +   I+S   ++ +     +          ++  +   I + +
Sbjct: 880 NSLSWLDKFGNKEVDLYRDWLIVSDFNIVNNLSKDCLS---------IDNNELGKIQILK 930

Query: 837 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 871
           A+G KC+RCW+Y       +E+  LC RC  ++ +
Sbjct: 931 AKGLKCDRCWHYQNITVKGIENTKLCERCANIINL 965


>sp|A2BUL8|SYI_PROM5 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9515) GN=ileS PE=3 SV=1
          Length = 965

 Score =  425 bits (1093), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/481 (45%), Positives = 282/481 (58%), Gaps = 69/481 (14%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           +KK +  YK T++L KT F MRAN++ REP+I + W  +++ L +   N GE F LHDGP
Sbjct: 8   DKKSKFSYKETLNLLKTDFSMRANSVSREPQIQEFWLKNKIDLELGSSNLGEKFTLHDGP 67

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANG+LHMGHALNK+LKDIIN+YK L+ +KV +VPGWDCHGLPIELKVLQSL    +KD
Sbjct: 68  PYANGSLHMGHALNKVLKDIINKYKTLKGFKVHFVPGWDCHGLPIELKVLQSLKSHERKD 127

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----------- 267
           L    LR KA  +AK  +K Q+  FKR+G+W DW+NPYLTL   YE+AQ           
Sbjct: 128 LDSLGLRKKATDYAKIQIKNQLEGFKRWGIWGDWDNPYLTLKNNYESAQIGVFGKMFLNG 187

Query: 268 -------------------------YPEGHVSRSIYAVFRMVSAPPST------SGLLNE 296
                                    YPE H S S+Y    + +             L N+
Sbjct: 188 YIYRGLKPVHWSPSSRTALAEAELEYPEEHYSSSVYVSLNISNLSDEILLKLEEKDLKNK 247

Query: 297 FLPDLG---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 353
            L +L    +A+WTTTPWT+P N AVA+N ++ Y   E                      
Sbjct: 248 LLSNLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFAE---------------------- 285

Query: 354 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 413
             DQ     + A DL+  +  K   +      + GS L    Y HP  N+ C +VIGGDY
Sbjct: 286 --DQNGDIFLFAKDLISEISEKLEREFNTLIDVKGSMLTGIEYKHPTKNKFCNIVIGGDY 343

Query: 414 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 473
           ITTESGTG+VHTAPGHG +D+    KY LPI   VD++G     A KF GL+VL D N  
Sbjct: 344 ITTESGTGIVHTAPGHGMDDFNVGKKYHLPITCIVDEKGNLNNHAEKFCGLNVLKDANDL 403

Query: 474 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 533
           +++ L +   L+++E Y+H+YPYDWRTKKPTIFRATEQWFASVEGFR +A+ AI  V+W+
Sbjct: 404 IIEDLKKNNLLLLKEKYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSALKAIEDVEWM 463

Query: 534 P 534
           P
Sbjct: 464 P 464



 Score =  252 bits (644), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 203/335 (60%), Gaps = 21/335 (6%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+  +   I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPIDEEID 707

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D LP++DQ+ L +L ++   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPILDQWMLNRLVDVSDQITIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              +S  RR+CQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VFE  
Sbjct: 768 SAKSSIRRRTCQFVMSKIVENLAVLISPVLCHMAEDIWQNIPYS------TNEKSVFERG 821

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP L + W    + E      + +LR E+NK +E  RT ++IG++LE +V    ++  + 
Sbjct: 822 WPNLPKSWINPELNERI--SNLRKLRVEINKAIEGCRTQQIIGAALETEVNYLPENEIIK 879

Query: 778 SRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW-IGVS 835
           + L  +      + D      I+S+  V+    N L        +YL+   +++  I + 
Sbjct: 880 NSLSWLEKFGNKEVDLYSDWLIVSKFNVV----NNLFE------DYLIIDDNELGKIQIL 929

Query: 836 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
           +A+G KC+RCW+Y +     +E   LC RC  ++ 
Sbjct: 930 KAKGQKCDRCWHYQSNTVMGIEDTKLCKRCANIIT 964


>sp|A2BP36|SYI_PROMS Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain AS9601)
           GN=ileS PE=3 SV=1
          Length = 968

 Score =  415 bits (1066), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/489 (45%), Positives = 289/489 (59%), Gaps = 73/489 (14%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K +  YK T++L KT F MRAN++VREPEI   W  + +  ++   N GE F
Sbjct: 2   KSQNSKEQKSDFSYKETLNLLKTDFSMRANSVVREPEIQNFWAKNNIDFKLGSNNSGEIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----- 267
            D +K+L    LR KA  +A   +  QM  FKR+G+W DW+NPYLTL   YE+AQ     
Sbjct: 122 SDERKNLDTLNLRKKATDYAHIQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFG 181

Query: 268 -------------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNE 296
                                          YP+ H S+SIY   ++     S   LLN 
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYISLKITKI--SEEILLNF 239

Query: 297 FLPDLGL-----------AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 345
              +L +            +WTTTPWT+PAN AVAVN K++Y                  
Sbjct: 240 VQENLNIKREFFENNSFITIWTTTPWTIPANEAVAVNPKIKYVFA--------------- 284

Query: 346 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 405
                   + ++K++++  A DL   +  K+   L +   + GS LEN  Y HP  N+ C
Sbjct: 285 --------IDEEKRIYLF-AKDLSTEISNKFNKDLKVLLEVKGSQLENIEYQHPSKNKNC 335

Query: 406 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 465
            +VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +
Sbjct: 336 RIVIGGDYITTESGTGIVHTAPGHGVDDFNVGQKYDLPITCVVDEKGNLNEYSGQFQGSN 395

Query: 466 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 525
           VL D N  +++YL     L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ 
Sbjct: 396 VLKDANDLIIEYLKGNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALQ 455

Query: 526 AIGQVKWVP 534
           AI  V+W+P
Sbjct: 456 AIEDVEWMP 464



 Score =  258 bits (660), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 201/337 (59%), Gaps = 21/337 (6%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSYE 707

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVFQRG 821

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV-YLFTDDASL 776
           WP+  + W+   + E      +  LR E+NK +E  R  ++IG++LE +V YL  D    
Sbjct: 822 WPIFAQSWKNQILNEHI--ANLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPEDKVVK 879

Query: 777 ASRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 835
            S +        D D  +   I+S  +V+     N LI +    G+          I + 
Sbjct: 880 DSLIWLQEFGSQDVDLFRDWLIVSNFQVVSDLVENSLIIDNNALGK----------IQII 929

Query: 836 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 872
           +A+G KC+RCW+Y  +  + +++  LC RC  ++ ++
Sbjct: 930 KAQGQKCDRCWHYQKETFNGIQNTKLCKRCSNIINLE 966


>sp|A8G2P6|SYI_PROM2 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9215) GN=ileS PE=3 SV=1
          Length = 965

 Score =  414 bits (1063), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/489 (45%), Positives = 288/489 (58%), Gaps = 73/489 (14%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K E  YK T++L KT F MRAN+++REPEI   W  + +   +   N G+ F
Sbjct: 2   KSQNSKEQKSEFSYKETLNLLKTDFSMRANSVLREPEIQDFWAKNNIDFELGLNNSGKTF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LHMGHALNK+LKDIIN+YK L+ +KV YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----- 267
              +K+L    LR KA  +A   +  QM  FKR+G+W DW+NPYLTL   YE+AQ     
Sbjct: 122 SHERKNLNSLSLRKKATDYAHKQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFG 181

Query: 268 -------------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLN- 295
                                          YP+ H S+SIY   ++   P     LL  
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKVPDKV--LLKG 239

Query: 296 ----------EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 345
                      FL +  + +WTTTPWT+PAN AVAVN K+ Y  V               
Sbjct: 240 CQENPNIKKESFLGNSFITIWTTTPWTIPANEAVAVNPKISYVFV--------------- 284

Query: 346 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 405
                   + + K++F+  A +L   +  K+     I   + GS LEN  Y HP  N+ C
Sbjct: 285 --------IDEDKRIFLF-AKNLFSEISEKFNKIFKILFEVKGSSLENIEYQHPTKNKNC 335

Query: 406 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 465
            +VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +
Sbjct: 336 RIVIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSN 395

Query: 466 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 525
           VL D N  +++YL  +  L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV+GFR +A+ 
Sbjct: 396 VLKDSNDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVDGFRSSALK 455

Query: 526 AIGQVKWVP 534
           AI  V+W+P
Sbjct: 456 AIEDVEWMP 464



 Score =  260 bits (664), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 201/339 (59%), Gaps = 21/339 (6%)

Query: 536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 594
           +  P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +
Sbjct: 645 KSEPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNID 704

Query: 595 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 654
           S   D LP++DQ+ L +L  +   I  +YESY+F + FQI+Q F +VDLSNFY D+AKDR
Sbjct: 705 SFEIDQLPLLDQWMLGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDR 764

Query: 655 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 714
           LY    + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF
Sbjct: 765 LYVSAKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVF 818

Query: 715 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 774
           +  WP+  + W+   + +      +  LR E+NK +E  R  ++IG++LE +V     D 
Sbjct: 819 QRGWPIFSQSWKNESLNQHI--TNLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPKDK 876

Query: 775 SLASRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWI 832
            +   L  +      D D  +   I+S  +V+     N LI +    GE          I
Sbjct: 877 FVKDSLNWLRKFGNEDVDLFRDWLIVSNFQVVSYLAENSLIIDSNELGE----------I 926

Query: 833 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 871
            + +A G KC+RCW+Y  ++ S +++  LC RC +++ +
Sbjct: 927 QILKARGLKCDRCWHYQKEIVSGIQNTKLCKRCAKIINL 965


>sp|A3PAV8|SYI_PROM0 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9301) GN=ileS PE=3 SV=1
          Length = 968

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/487 (43%), Positives = 277/487 (56%), Gaps = 69/487 (14%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K +  YK T++L KT F MRAN+++REPEI   W ++ +  ++   N GE F
Sbjct: 2   KSQNSKEQKSDFSYKETLNLLKTDFSMRANSVLREPEIQNFWANNDIDFQLGSSNSGEIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V +VPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLKGFRVHFVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----- 267
            D +K+L    LR KA  +A   +  Q   FKR+G+W DWNNPYLTL   YE+AQ     
Sbjct: 122 SDERKNLDTLNLRKKATDYAHIQINNQKEGFKRWGIWGDWNNPYLTLKKSYESAQIGVFG 181

Query: 268 -------------------------------YPEGHVSRSIYAVFRMVSAPPSTS----- 291
                                          YP+ H S+SIY   ++   P         
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKIPEEIQLNFIQ 241

Query: 292 ---GLLNEFLPDLGLAVWTTTPWTVP-ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 347
               +  +F  +       TT      AN AVAVN K+ Y                    
Sbjct: 242 KNINIKKDFFQNNSFITIWTTTPWTIPANEAVAVNPKINYIFA----------------- 284

Query: 348 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 407
                 + ++K++++  A DL   +  K+     +   + GS LEN  Y HP  N+ C +
Sbjct: 285 ------IDEEKRIYLF-AKDLCSEISKKFNKDFKVLLEVKGSKLENIEYQHPSKNKNCRI 337

Query: 408 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 467
           VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +VL
Sbjct: 338 VIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSNVL 397

Query: 468 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 527
            D N  +++YL     L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ AI
Sbjct: 398 KDANDLIIEYLKVNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAI 457

Query: 528 GQVKWVP 534
             V+W+P
Sbjct: 458 EDVEWMP 464



 Score =  264 bits (674), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 203/339 (59%), Gaps = 21/339 (6%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSFE 707

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYS------TKEKSVFQRG 821

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP+  + W+   + E      +  LR E+NK +E  R  ++IG++LE +V    +D +L 
Sbjct: 822 WPIFSQSWKNKILNEHI--SNLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPEDKALK 879

Query: 778 SRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 835
             L  +      D D  +   I+S  +V+     N L  +    G+          I ++
Sbjct: 880 DSLTWLKEFGNQDVDLFRDWLIVSNFQVVSDLVDNSLATDNNALGK----------IQIN 929

Query: 836 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI 874
           +A+G KC+RCW+Y  +  + +++  LC RC  ++  + I
Sbjct: 930 KAQGQKCDRCWHYQKETFNGIQNTKLCKRCSNIINFEFI 968


>sp|Q31CU4|SYI_PROM9 Isoleucine--tRNA ligase OS=Prochlorococcus marinus (strain MIT
           9312) GN=ileS PE=3 SV=1
          Length = 968

 Score =  399 bits (1026), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/487 (41%), Positives = 273/487 (56%), Gaps = 69/487 (14%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E K E  YK T++L KT F MRAN+++REPEI   W  + +   +   N G+ F
Sbjct: 2   KSQNNKEYKSEFSYKETLNLLKTDFSMRANSVLREPEIQNFWAKNNIDFELGSNNSGKIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----- 267
              +K+L    LR KA  +A   +  QM  FKR+G+W +W+NPYLTL   YE+AQ     
Sbjct: 122 SSERKNLDTLNLRKKATDYAYVQINNQMEGFKRWGIWGNWDNPYLTLKKSYESAQIGVFG 181

Query: 268 -------------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNE 296
                                          YP+ H S+SIY   ++            +
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYVSLKITKLSDEILLKFYQ 241

Query: 297 FLPDLGLAVWTTTPWTVP---------ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 347
             P+     + +  +            AN AVAVN K+ Y                    
Sbjct: 242 ENPNFKKDFFLSNSFITIWTTTPWTIPANEAVAVNPKINYVFA----------------- 284

Query: 348 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 407
                 + ++K+++++ A +L   +  K+   L     + G  LE+  Y HP  N+ C +
Sbjct: 285 ------IDEEKRIYLL-AKELSSEISNKFNKDLTTLLEVKGVTLEDIEYQHPTKNKNCRI 337

Query: 408 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 467
           VIGGDYIT ESGTG+VHTAPGHG +D+    KY LP    VD++G   E +G+F G +VL
Sbjct: 338 VIGGDYITIESGTGIVHTAPGHGIDDFNVGRKYDLPTTCVVDEKGNLNEYSGQFQGSNVL 397

Query: 468 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 527
            D N  ++ YL+E+  L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ AI
Sbjct: 398 KDANDLIIDYLEEKDLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAI 457

Query: 528 GQVKWVP 534
             V+W+P
Sbjct: 458 EDVEWIP 464



 Score =  258 bits (660), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 200/337 (59%), Gaps = 21/337 (6%)

Query: 539 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 597
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFE 707

Query: 598 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 657
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 658 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 717
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNVPYS------TKEKSVFQRG 821

Query: 718 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 777
           WP   + W+   + E      +  LR E+NK +E  R  ++IG++LE +V     D  + 
Sbjct: 822 WPNFSQSWKNEILNEHI--ANLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPKDKVVK 879

Query: 778 SRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 835
             L  +      + D  +   I+S  +V+     N LI          ++  +   I + 
Sbjct: 880 DSLTWLKKFGNEEVDLFRDWLIVSNFQVVSELAKNSLI----------IDNNEIGKIQIL 929

Query: 836 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 872
           +A G KC+RCW+Y  ++ S +++  LC RC  ++ ++
Sbjct: 930 KAHGQKCDRCWHYQEEIFSGIQNTKLCKRCSHIINLE 966


>sp|B9K8X3|SYI_THENN Isoleucine--tRNA ligase OS=Thermotoga neapolitana (strain ATCC
           49049 / DSM 4359 / NS-E) GN=ileS PE=3 SV=1
          Length = 918

 Score =  350 bits (897), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 199/514 (38%), Positives = 293/514 (57%), Gaps = 72/514 (14%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK+T++LPKT+F MRAN + +E    K W++  ++  V ++  G+  FVLHDGPPYANG+
Sbjct: 3   YKNTLNLPKTSFPMRANLVNKEKAFLKEWEEMDLYNYVLEQRKGKPLFVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDI+ +YK ++ Y+  YVPGWD HGLPIE +V Q L  D  K+++P+++
Sbjct: 63  IHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHRVSQELG-DRIKEMSPAEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEA-------AQYPEGHVSRSI 277
           R K  +FA   V+ Q   FKR GV  DWNNPY+TL P+YE            +G+V RS+
Sbjct: 122 RKKCEEFALKFVEIQKEEFKRLGVRGDWNNPYITLKPDYEVKILDVFKTLVEQGNVYRSL 181

Query: 278 YAVF---RMVSA-------------PPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 321
             ++   R  +A             P       ++  P+L + +WTTTPWT+PAN  +A+
Sbjct: 182 KPIYWCPRCRTALAEAEIEYHDHRSPSIYVKFRSKDDPNLYIVIWTTTPWTLPANVGIAL 241

Query: 322 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL- 380
           +   +Y+VV++     GD                       ++A+DL+ T   + G    
Sbjct: 242 HPDFEYSVVKV-----GDERW--------------------VIATDLLETFSRETGVDCS 276

Query: 381 -VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS-L 438
            V++K + G DLE   + HP+   +   VI  DY++ E+GTG VH APGHG+EDYV   +
Sbjct: 277 EVVEK-IRGKDLEGKEFQHPIFEDKTSRVILADYVSLETGTGCVHIAPGHGEEDYVYGHV 335

Query: 439 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 498
           KYGLPI+SPVD+EG+FT+EAGK+ G+  + D N  +++ L E+  L+      H YP+ W
Sbjct: 336 KYGLPIVSPVDEEGRFTDEAGKYRGM-FIEDSNRVIIEDLKEKGILVHASTITHSYPHCW 394

Query: 499 RTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVL 546
           R K P IFRATEQWF SV+    RQ  ++ I +VKW+P           +E P +     
Sbjct: 395 RCKGPVIFRATEQWFISVDHNNLRQRVLEEIDRVKWIPEWGRNRIRSMVEERPDWCISRQ 454

Query: 547 RLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 575
           R+W + +        G+V + P+V+     I  K
Sbjct: 455 RVWGTPIPAVKCKECGEVTLDPKVIEHFMKIVEK 488



 Score =  199 bits (506), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 194/337 (57%), Gaps = 28/337 (8%)

Query: 534 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 593
           P +    YGA++LRLW++S DY  D+ I  +++ Q +++Y+K+R T R+LLGNL D+   
Sbjct: 604 PMEVVEKYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYKKIRNTFRFLLGNLEDFDPE 663

Query: 594 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 652
            + + Y+ L  ID++AL +L+ I+K   E Y+SY+F K++ ++ ++   +LS+ Y DV K
Sbjct: 664 LDRVPYEKLLTIDKWALGRLQEIIKRATEYYDSYEFSKVYNLVVKYCTTELSSLYLDVVK 723

Query: 653 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 712
           DRLY     S  RRS QTV+   L+++++++API+    E+V+ +L           AE+
Sbjct: 724 DRLYVEAKDSLYRRSAQTVMHEILIALMKILAPIMTFTMEEVYSHLHEKDRKYKTVQAEY 783

Query: 713 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 772
             E +  ++D+K     + E +   K+L +R +V K LE  R   +IG SL+A+V L   
Sbjct: 784 WPEYREDLIDKK-----IMEDF--EKLLSIREDVLKALEEKRQQDVIGHSLDAEVILVPR 836

Query: 773 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 832
           + S+ + L E        D L+ +FI+S+V +  S  +G ++     GE LVE      +
Sbjct: 837 NDSVKALLEEY------RDVLEELFIVSKVSL--SDGSGELK-----GE-LVE------V 876

Query: 833 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
               AEG KC+RCW Y+T++    E P +C RC  VL
Sbjct: 877 TAKHAEGEKCQRCWKYTTEISRSEEFPAVCPRCLAVL 913


>sp|Q2RK59|SYI_MOOTA Isoleucine--tRNA ligase OS=Moorella thermoacetica (strain ATCC
           39073) GN=ileS PE=3 SV=1
          Length = 930

 Score =  342 bits (876), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 186/460 (40%), Positives = 271/460 (58%), Gaps = 59/460 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   REPEI K W+++ ++ +V + N G+  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPRTDFPMRANLPQREPEILKFWEENDIYGKVQEANRGKPKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GH LNKILKDII +Y  +  Y   YVPGWD HGLPIE + +++L  + +  +   + 
Sbjct: 63  LHLGHTLNKILKDIIIKYHSMNGYDAPYVPGWDTHGLPIEQQAIKNLGLN-RHAVDVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVSRSI 277
           R +   +A   V  Q   FKR GV  DW +PYLTL+PEYEA Q         +G++ + +
Sbjct: 122 RNRCRDYALKYVNIQREEFKRLGVRGDWEHPYLTLEPEYEAIQIGIFGEMAKKGYIYKGL 181

Query: 278 YAVFRMVSAPPSTSGLLNEF----LPDL------------------GLAVWTTTPWTVPA 315
             V+       + +    E+     P +                   + +WTTTPWT+PA
Sbjct: 182 KPVYWCTDCETALAEAEVEYGEERSPSIYVKFPVADARGLFEPRGSSIVIWTTTPWTLPA 241

Query: 316 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV-PTLEA 374
           N A+A++ + +Y ++++     G+                      +++A++LV P LE 
Sbjct: 242 NVAIALHPEFKYVLIQV-----GEER--------------------LLMAAELVRPVLEL 276

Query: 375 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 434
                  +  T  GS+LE     +P+ +R   VVI G+++T E GTG VHTAPGHG EDY
Sbjct: 277 LGVKDYQVVATFTGSELEGVVCRNPLMDRDS-VVILGEHVTLEQGTGCVHTAPGHGLEDY 335

Query: 435 VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 494
              ++Y LP+LSP+DD G+FTEE G+F+GL  + + N AVVK L+ + +L+     +H+Y
Sbjct: 336 EVGMRYHLPVLSPLDDRGRFTEEGGQFAGL-FIDEANKAVVKELEARGALLHFGFIKHQY 394

Query: 495 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           P+ WR K P IFRATEQWFAS+EGFRQ A++AI +VKW+P
Sbjct: 395 PHCWRCKHPIIFRATEQWFASIEGFRQEALEAIKKVKWIP 434



 Score =  191 bits (484), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 27/332 (8%)

Query: 542 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 600
           GADVLRLWV+S DY  DV     ++RQ+++ YRK+R T R+LL NL D+  G + +  ++
Sbjct: 615 GADVLRLWVASADYRRDVAASENIMRQITEAYRKIRNTCRFLLANLADFDPGKDQVPREE 674

Query: 601 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 660
           +  +D++A+ +L+ ++  +  +Y+ Y+F  ++  I  F  VDLS  Y D+ KDRLYT   
Sbjct: 675 MLELDRWAMNRLQRLIARVTMAYDDYEFHVVYHTIHNFCAVDLSAVYLDIIKDRLYTWPA 734

Query: 661 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 720
            S  RRS QTVL   +  +VR++ PIL    E++W+ LP     ED         + WP 
Sbjct: 735 ASKGRRSAQTVLYETINVLVRLLTPILAFTTEEIWRYLPG----EDDRPISVQL-AGWPQ 789

Query: 721 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 780
           +  ++    + E   W +IL++R  V + LE AR  + +G+SL A V+L+  DA +   L
Sbjct: 790 VKTEFLDDELEEK--WKRILQVRDVVARALERARQEQDLGNSLNAAVHLYP-DADMYQFL 846

Query: 781 REMCTAKHDADTLQRIFIISQVEVL---PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 837
           + +       D L  I I+S+V++       P G +      G         + + V+ A
Sbjct: 847 KPL------GDELATIMIVSRVDLHQPGEEAPAGSLEAPELPG---------LRVYVTGA 891

Query: 838 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            G KCERCW  S  VG   +HPTLC RC  V+
Sbjct: 892 PGQKCERCWMVSETVGQDTDHPTLCRRCATVV 923


>sp|B2A2I8|SYI_NATTJ Isoleucine--tRNA ligase OS=Natranaerobius thermophilus (strain ATCC
           BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=ileS PE=3 SV=1
          Length = 926

 Score =  341 bits (875), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 190/463 (41%), Positives = 267/463 (57%), Gaps = 64/463 (13%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F M+A    REPE  + W+ + ++ RV  K  G+  ++LHDGPPYANGN
Sbjct: 3   YKDTLNLPKTDFPMKAKLPSREPEFLQEWESNNLYQRVQQKRSGKPKYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKDI+ ++K +Q Y   YVPGWD HGLPIE ++ ++   D +K ++  + 
Sbjct: 63  IHMGHALNKVLKDIVVKFKTMQGYDSPYVPGWDTHGLPIEHQITKTEKVD-RKSMSDVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYP-------EGHVSRSI 277
           R K   +A   V+ Q   FKR GV  DW+NPYLTL PE+EA Q         +G++ + +
Sbjct: 122 RKKCHDYAMKYVEIQKEEFKRLGVRGDWDNPYLTLSPEFEAEQVKLFGEMAQKGYIYKGL 181

Query: 278 YAVFRMVSAP---------------PS---------TSGLLNEFLPDLGLAVWTTTPWTV 313
             V+                     PS         + G  NE    +   +WTTTPWT+
Sbjct: 182 KPVYWCTDCETALAEAEVEYHDKRSPSIYVGFHVKDSKGEFNE--EGVEFIIWTTTPWTI 239

Query: 314 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL- 372
           PAN A+A++ + QY+++                        K  +K +I VA+DL+ T+ 
Sbjct: 240 PANMAIALHPEFQYSLI------------------------KSGEKHYI-VATDLLETVA 274

Query: 373 -EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQ 431
            EAK G   +I++   G +LE     HP+ + +  +VI GD++T E GTG VHTAPGHG 
Sbjct: 275 EEAKLGEYQIIRE-YTGRELEGIVCQHPLFDSRESLVILGDHVTLEQGTGCVHTAPGHGH 333

Query: 432 EDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 491
           EDY  + KY L +LSP++D G FTEEAG+F GL      N  + + LD++ +L+      
Sbjct: 334 EDYEVAQKYDLEVLSPLNDSGVFTEEAGQFQGL-YYDKANKEITQALDKRGALLSLSFIT 392

Query: 492 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           H+YP  WR K+  IFRATEQWFASV+GFRQ A+ AI  V W+P
Sbjct: 393 HQYPCCWRCKESVIFRATEQWFASVDGFRQDALKAIEDVDWIP 435



 Score =  218 bits (555), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 206/375 (54%), Gaps = 32/375 (8%)

Query: 500 TKKPTIFRA--TEQWFASVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYT 556
           TK  + +R   T  W    EG + +      Q   + PQ+    YGAD+LRLWV+S ++ 
Sbjct: 574 TKGESPYRECLTNGWVVDGEGKKMSK----SQGNVIAPQDITNQYGADILRLWVASSEFK 629

Query: 557 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENI 615
            DV +  ++L+Q ++ YRK+R T R++LGNL+D+    + +S+D L  ID Y L +L+ +
Sbjct: 630 QDVRVSQKILKQTAEAYRKIRNTARFILGNLYDFTPEKDYVSFDQLEEIDSYILCRLQKV 689

Query: 616 VKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAH 675
           +     +Y+ ++F + + +I  F +V+LS FY DV KDR+YT  T S  RR+ QT +   
Sbjct: 690 IDQATRAYDEFEFHEFYHLIHNFCVVELSQFYLDVIKDRIYTMPTESRERRAAQTTMYYL 749

Query: 676 LLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF 735
           L S+V+++AP+L   +E++WQ LP       G   E +  + WP ++E+     + +   
Sbjct: 750 LDSLVKMLAPVLTFTSEEIWQYLP-------GDREESIQLTDWPEVNEELVDNELEQK-- 800

Query: 736 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 795
           W   LE R EV K LE AR  K IGSSLE+K+ ++ D+  L  +L+         D L+ 
Sbjct: 801 WANFLEFRKEVAKALENARKDKKIGSSLESKILIYADE-DLFKKLQSF------EDNLEE 853

Query: 796 IFIISQVEVLPSTP-NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGS 854
           +FI+SQVE+  +      ++N   S E + +      I +  A+G KC RCWNY  +V  
Sbjct: 854 LFIVSQVELKKAEQLTETVKNQALSSEDVEQAS----IIIEAAQGEKCPRCWNYHPEVTK 909

Query: 855 FVEHPTLCSRCYEVL 869
             E   LC RC  VL
Sbjct: 910 AEE---LCPRCSHVL 921


>sp|B8CWL4|SYI_HALOH Isoleucine--tRNA ligase OS=Halothermothrix orenii (strain H 168 /
           OCM 544 / DSM 9562) GN=ileS PE=3 SV=1
          Length = 929

 Score =  341 bits (874), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 265/469 (56%), Gaps = 72/469 (15%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP+T F MRAN   REP I K W+++ V+ +     +G + F+LHDGPPYANG+
Sbjct: 3   YKETINLPRTEFPMRANLSKREPGIEKYWEENNVYEKAIKNREGNKQFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDI+ RYK L  Y   YVPGWD HGLPIE KV + + + A KDL+ S+L
Sbjct: 63  IHIGHALNKILKDIVTRYKTLSGYYSPYVPGWDTHGLPIEHKVTKEMGDKA-KDLSVSEL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----------------- 267
           R K   +A   V+ Q   FKR GVW +W+ PYLTL+PEYE  Q                 
Sbjct: 122 RDKCRDYALKYVERQKEQFKRLGVWGEWDKPYLTLNPEYEVKQIEVFGEMAKRGLFYKGK 181

Query: 268 -------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWT 307
                              Y E H S SIY  F +     +  G+  E  P D  + +WT
Sbjct: 182 KPVHWCPSCETALAEAEVEYGE-HRSPSIYVKFPL-KDKVNVGGV--ELTPGDSYVVIWT 237

Query: 308 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 367
           TTPWT+PAN A+A++ +  Y VV+          A   K               +++A +
Sbjct: 238 TTPWTIPANMAIALHPEFDYVVVK----------ASGEK---------------LVMARE 272

Query: 368 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           LV  +  EA+     V+ +   G++LEN R  HP ++R   ++I GD++T E GTG VHT
Sbjct: 273 LVDRVMEEAEVENYKVVGQAFKGTELENKRCRHPFEDRDS-ILILGDHVTLEQGTGCVHT 331

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHG +DY+  LKY L I +P+D+ G FTEEA +F+G+    D N  V K LDE+  L+
Sbjct: 332 APGHGHDDYLVGLKYDLDIYAPMDNRGVFTEEAERFAGM-YYDDVNKEVTKILDEKGLLM 390

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
                 H+YP+ WR K   IFRAT+QWFAS+E  ++ A+ AI  V W P
Sbjct: 391 NLSFISHQYPHCWRCKGALIFRATDQWFASIEAIKEEALKAIHSVDWYP 439



 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 213/350 (60%), Gaps = 29/350 (8%)

Query: 526 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 584
           +IG V  V PQ+    YGAD+LRLWV+S ++  DV +  ++L+Q S++YR++R T R++L
Sbjct: 605 SIGNV--VSPQDVIKRYGADILRLWVASSNFKDDVRVSDRILKQNSEVYRRIRNTFRFIL 662

Query: 585 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 643
           GN++D+  G   + Y+D   ID++ + +L++++K++  +Y+ Y++ +++  +  F  +++
Sbjct: 663 GNINDFNPGQHYVDYNDRAEIDRWIMIKLQDLIKDVTRAYDEYEYHRVYHDVHNFCTIEM 722

Query: 644 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 703
           S+ Y D+ KDRLYT GT S +RRS Q+ L   LL +V+++AP+L H AE+VWQ+L     
Sbjct: 723 SSLYVDIVKDRLYTDGTNSLSRRSAQSTLYDILLVLVKLVAPVLAHTAEEVWQHLD---- 778

Query: 704 LEDGSAAEFVFESKWP-VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 762
            E    AE +F + WP V++E +    + +   W K+LE+R +V K LE++R  K IG+S
Sbjct: 779 -ESSKDAESIFLTDWPEVVNEYYDDRLMSK---WDKLLEVRKDVAKALELSRENKEIGNS 834

Query: 763 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 822
           L+A+V L   D     + R++   K + D L  +FI+SQVE+   T  G  +        
Sbjct: 835 LDARVILVPVD----DKQRQLL--KDNIDILPDLFIVSQVELQGETGEGFHKG------- 881

Query: 823 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 872
               +  + + V +A G KC RCW YS  VG+  EHP LC RC EV+  +
Sbjct: 882 ---SETGISVSVVKASGEKCARCWKYSEAVGNDEEHPELCERCVEVVRTE 928


>sp|A4J2F4|SYI_DESRM Isoleucine--tRNA ligase OS=Desulfotomaculum reducens (strain MI-1)
           GN=ileS PE=3 SV=1
          Length = 931

 Score =  340 bits (872), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 180/459 (39%), Positives = 263/459 (57%), Gaps = 57/459 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LP+T F MR N   REPE  K W +  ++ +V +KN G+  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPQTQFPMRGNLPQREPETQKYWQEIDLYKKVQEKNKGKTKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKDII +Y+ +  Y   YVPGWD HGLPIE + ++ L  + +  + P + 
Sbjct: 63  IHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGWDTHGLPIEQQAIKQLGIN-RHQVNPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVSRSI 277
           RAK   +A      Q   F+R GV  DW NPY TL P+YEA Q         +G++ + +
Sbjct: 122 RAKCKDYALKWANTQSEEFQRLGVRGDWENPYYTLLPQYEATQIRVFGEMAKKGYIYKGL 181

Query: 278 YAVFRMVSAPPSTSGLLNEF--------------------LP-DLGLAVWTTTPWTVPAN 316
             V+   S   + +    E+                    LP D  + +WTTTPWT+PAN
Sbjct: 182 KPVYWCASCETALAEAEVEYADKTSPSIYVKFPVKDGKGVLPQDAAVVIWTTTPWTLPAN 241

Query: 317 AAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW 376
            A++V+ + +Y +  +Q           N+K              I+VA +L+ + +   
Sbjct: 242 VAISVHPEFEYVLAAVQ-----------NQK--------------IVVAKELLESFKQAV 276

Query: 377 GTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 435
           G +   I  T  G  LE     HP  + +  +VI G+++T ++GTG VHTAPGHG+ED++
Sbjct: 277 GAEEAEILATYQGEQLERVVCQHPFIDERESLVILGEHVTLDAGTGAVHTAPGHGEEDFM 336

Query: 436 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 495
              KY LP+L+P+D+ G+FT E GKF G  ++ D N  +++ L E+ +L+     +H+YP
Sbjct: 337 VGKKYELPVLAPIDNRGRFTSEGGKFQGQFIM-DANKTIIEELKERDALMGHVSIKHQYP 395

Query: 496 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           + WR K+P  FRATEQWFASV+GFRQ A+ AI  VKWVP
Sbjct: 396 HCWRCKQPIFFRATEQWFASVDGFRQEALQAIRNVKWVP 434



 Score =  220 bits (560), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 195/329 (59%), Gaps = 23/329 (6%)

Query: 542 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 600
           GAD+LRLWVSS DY  D+ +   +L+QM++ YRK+R T R+LLGNL+D+  V + ++YD 
Sbjct: 619 GADILRLWVSSADYRADLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPVKDKVAYDK 678

Query: 601 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 660
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  +  + +VDLS FY D+ KDRLYT   
Sbjct: 679 LPELDRVALMELHKLIKQVLAAYENYEFHIVYHAVHNYCVVDLSAFYLDIIKDRLYTAVP 738

Query: 661 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 720
            S  RR+ QTVL   L ++VR++ P+L    E++++ +P       G     V     P 
Sbjct: 739 GSLERRAAQTVLYEALDALVRLLTPVLAFTTEEIYKYMPVV-----GDRLASVQMLDMPE 793

Query: 721 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 780
           ++ ++    + +   W KI E+R EV K LEVAR  K+IG++LEAKV L+     +A  +
Sbjct: 794 VNVEYMDVELEKK--WDKIHEIRKEVLKALEVARKNKVIGNALEAKVDLY-----VAGDV 846

Query: 781 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 840
            E+   K  A  L  +FI+S+V +     +GL        + +   + ++ + V+ AEG 
Sbjct: 847 EEVL--KPMAAELTTLFIVSKVNL-----HGLAAA---PADAVKAEELELALQVATAEGG 896

Query: 841 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           KCERCW Y  +VG+  EH TLC RC  V+
Sbjct: 897 KCERCWMYHEEVGNDAEHATLCPRCATVV 925


>sp|C5CHA1|SYI_KOSOT Isoleucine--tRNA ligase OS=Kosmotoga olearia (strain TBF 19.5.1)
           GN=ileS PE=3 SV=1
          Length = 921

 Score =  340 bits (871), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 188/455 (41%), Positives = 257/455 (56%), Gaps = 53/455 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LPKT+F MRAN + +EPE  K W++  ++  V    +G   FVLHDGPPYANGN
Sbjct: 3   YKDTLNLPKTSFSMRANLVRKEPEQLKKWEEMDLYKYVQKNREGAPLFVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKD I +YK +Q Y   Y+PGWD HGLPIE +V   L E A K+L+ S +
Sbjct: 63  IHVGTALNKILKDFIIKYKTMQGYNAPYIPGWDTHGLPIEHRVASELGEKA-KELSKSTI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVSRSI 277
           R K  K+A+  VK Q   FKR GV  DW NPYLT DP+YEA+           G+V R++
Sbjct: 122 RKKCRKYAEKYVKIQREQFKRLGVRGDWENPYLTFDPKYEASVLKVLSKLVKSGNVYRTL 181

Query: 278 YAVFRMVSAPPSTSGLLNEF----------------LPDLGLAVWTTTPWTVPANAAVAV 321
             ++   S   + +    E+                 P+    +WTTTPWT+PAN A+A+
Sbjct: 182 KPIYWCTSCETALAEAEVEYHDHKSYSIYVKFQDKNKPNRFFVIWTTTPWTLPANVAIAL 241

Query: 322 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 381
           N    Y  V+++                         +++I+    L   ++A       
Sbjct: 242 NPNFDYCEVKVKD------------------------EIWILAEGLLEQAMKAMGIESYE 277

Query: 382 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 441
           I  T  GS+ E     HP  NR   V++  DY+  ++GTG VHTAPGHG+EDY T L+Y 
Sbjct: 278 IISTKKGSEFEGEVAQHPFMNRDS-VIVMADYVALDAGTGCVHTAPGHGEEDYGTGLRYR 336

Query: 442 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 501
           LP++SPV+D+G FT+EAGK++GL V  D N  +V+ L +   L+ E   EH YP+ WR K
Sbjct: 337 LPVISPVNDQGIFTKEAGKYAGLFVF-DANPIIVEDLRKSGHLVGEGKIEHSYPHCWRCK 395

Query: 502 KPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 534
            P IFRATEQWF  V+    RQ A+  I + +W P
Sbjct: 396 NPVIFRATEQWFIDVDKNDLRQKALSEIEKTEWHP 430



 Score =  238 bits (606), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 202/338 (59%), Gaps = 27/338 (7%)

Query: 533 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 591
           V PQE    YGA++LRLWV+S +Y  D+ I   +++Q  + Y+K+R TLRYLLGNL D+ 
Sbjct: 601 VDPQEINNKYGAEILRLWVASSNYQEDIRISMNIIQQQIENYKKIRNTLRYLLGNLSDYS 660

Query: 592 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 651
             +S+ Y++L  +D++A+ +L  +++++   Y+ Y+F+K+FQ I +FII D+S FY D+ 
Sbjct: 661 PQDSVPYEELLELDKWAIMKLHKLIRDVTRYYDRYEFYKVFQSILKFIITDMSAFYLDII 720

Query: 652 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 711
           KDRLY  G TS  RRS QTVL   L+++ +++APIL   +E+V+ +LP     E     +
Sbjct: 721 KDRLYVEGKTSPERRSAQTVLFEILVALNKMLAPILTFTSEEVYAHLP-----EAARNYK 775

Query: 712 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 771
            +    WP   E++    + E   W K++ LR +V K LE+AR  KLIG+SL+AKV L  
Sbjct: 776 TIQVENWPEYKEEYIDSSLEE--RWEKLINLREDVLKALEIARAEKLIGNSLDAKVTL-- 831

Query: 772 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 831
               + S+  +    ++  + +  +FI+SQVE   S          ++GEY V       
Sbjct: 832 ---QIRSKDIDEIVRQYSREFIADLFIVSQVEFAESVEG-------FNGEYAV------- 874

Query: 832 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           + V RAEG KC+RCW YS + G+  E P +C RC  VL
Sbjct: 875 VKVDRAEGEKCQRCWKYSIETGADPELPDMCPRCVAVL 912


>sp|Q3AEP2|SYI_CARHZ Isoleucine--tRNA ligase OS=Carboxydothermus hydrogenoformans
           (strain Z-2901 / DSM 6008) GN=ileS PE=3 SV=1
          Length = 925

 Score =  338 bits (867), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 193/466 (41%), Positives = 264/466 (56%), Gaps = 73/466 (15%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP T F MR N   REPEI   W    ++ +V  KN+G   F+LHDGPPYANG+
Sbjct: 3   YGKTLNLPVTDFPMRGNLPEREPEILAYWQKIDLYRKVQQKNEGRPKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK+LKD+I ++K +  Y   YVPGWD HGLPIE + ++ L  + +K+++P + 
Sbjct: 63  IHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGWDTHGLPIEQRAIKDLGIN-RKEISPLEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHV---- 273
           RAK  ++A+   + Q   FKR GV  DW NPYLTL P YEA Q         +G++    
Sbjct: 122 RAKCREYAEKYARIQKEQFKRLGVRGDWENPYLTLMPHYEAKQIEIFGEMAKKGYIYKGL 181

Query: 274 ------------------------SRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 309
                                   S SIY  F++V       G + E   D  L +WTTT
Sbjct: 182 KPVYWCPVCETALAEAEIEYAEKKSPSIYVRFKVVEG----KGKVPE---DAYLVIWTTT 234

Query: 310 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 369
           PWT+PAN A+AV+ +  YA+V+ +   +GD                       +VA  LV
Sbjct: 235 PWTLPANVAIAVHPEFTYALVKTE---KGD----------------------YVVAEGLV 269

Query: 370 PTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
               EA   T  ++ +   G +L      HP   R+ PVV+  DY+T ESGTGLVHTAPG
Sbjct: 270 QQFFEATKLTGEIVAR-FKGEELLGVVTRHPFIERESPVVLA-DYVTLESGTGLVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG ED+ T  KY LP+LSPV+ +G FTE AGK++G+ +  DGN A+ + L+    L+   
Sbjct: 328 HGTEDFETGKKYNLPVLSPVNHQGVFTEGAGKYAGMKI-DDGNKAITQDLEASGDLLAMS 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
             +H YP+ WR K P IFRATEQWFAS++GFR+ A+  I +V+W+P
Sbjct: 387 FIKHSYPHCWRCKNPVIFRATEQWFASIDGFREQALKEIEKVEWIP 432



 Score =  197 bits (502), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 181/329 (55%), Gaps = 28/329 (8%)

Query: 542 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGNSISYDD 600
           GAD+LRLWV+S DY  D+ I   +L+Q ++ YRK+R T+R+LLGNL+D+    + + Y+ 
Sbjct: 616 GADILRLWVASADYRSDLAISNNILKQTAEGYRKIRNTIRFLLGNLYDYDHEKHRVPYER 675

Query: 601 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 660
           L  ID++AL +L  ++  +  +Y  Y+F  +F  +  F  VD+S  Y D+ KDRLY    
Sbjct: 676 LLEIDRWALAKLHRLIARVVRAYRDYEFHVVFHAVHNFCTVDMSAIYLDIIKDRLYVELP 735

Query: 661 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 720
            S  RRS QTVL   L S++R++ PIL    E+ +++ P     E     +       P 
Sbjct: 736 DSEKRRSAQTVLYEILDSLLRLLTPILAFTTEEAYRHFPAKGKKESVQLLDM------PK 789

Query: 721 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 780
           ++E++    + E   W KILE+R +V K LE+AR  KLIG SL+A V L       +  L
Sbjct: 790 VEERYLDLTLEET--WDKILEVRAKVLKALEIARQEKLIGHSLDAWVTL-----KASGEL 842

Query: 781 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 840
            +    +   +    IFI+SQV+         I+N   +GE    G+  + + V++A G 
Sbjct: 843 YDFLVER--VNMWPEIFIVSQVD---------IQNEEVTGE---NGELPLEVVVNKALGE 888

Query: 841 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           KC+RCW YS +VG   E P  C RC  VL
Sbjct: 889 KCQRCWMYSPEVGLDPEFPDTCPRCAGVL 917


>sp|Q8RH47|SYI_FUSNN Isoleucine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
           (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
           GN=ileS PE=3 SV=1
          Length = 933

 Score =  337 bits (864), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 193/521 (37%), Positives = 280/521 (53%), Gaps = 78/521 (14%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + ++  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGVGKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYAVF 281
           R    K+AK  V  Q   F R GV  DW+NPYLTLDP +EA Q   + E +V+  I+   
Sbjct: 126 RKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYVNGYIFKGL 185

Query: 282 RMVSAPPSTSGLLNE----------------------------FLPDLGLAVWTTTPWTV 313
           + V   P+T   L E                            F  D+ + +WTTTPWT+
Sbjct: 186 KPVYWSPATETALAEAEIEYYDHVSPSIYVRMQANKDLLDKIGFNEDVYVLIWTTTPWTL 245

Query: 314 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 373
           PAN A+ +N    Y +                 K+  GN         +I+A DL  +  
Sbjct: 246 PANVAICLNENFDYGLY----------------KTEKGN---------LILAKDLAESAF 280

Query: 374 AKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 432
              G +   + K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQ+
Sbjct: 281 KDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQD 339

Query: 433 DYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 491
           DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   
Sbjct: 340 DYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEIS 398

Query: 492 HKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAP 539
           H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P           +  P
Sbjct: 399 HSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIGSMMETRP 458

Query: 540 GYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 575
            +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 459 DWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  249 bits (636), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/342 (41%), Positives = 211/342 (61%), Gaps = 46/342 (13%)

Query: 541 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 599
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 600 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 659
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 660 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 718
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 719 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 768
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 769 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYL-VEGK 827
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S            G Y   E  
Sbjct: 848 LYTEDNTLKEFIKE------NLELLKIVFIVSDLEVVDSA----------DGNYTDAEEI 891

Query: 828 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           +K+ I ++ A+G KCERCW Y  ++G+  EHPTLC RC  VL
Sbjct: 892 EKLKIKIAHADGEKCERCWKYD-ELGTDSEHPTLCPRCAAVL 932


>sp|Q49WX5|SYI_STAS1 Isoleucine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
           saprophyticus (strain ATCC 15305 / DSM 20229) GN=ileS
           PE=3 SV=1
          Length = 916

 Score =  335 bits (858), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/461 (41%), Positives = 256/461 (55%), Gaps = 65/461 (14%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD   ++ +V DKN+G  +F+LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPKIQEEWDAKNIYQKVLDKNEGNPSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE    Q+L +    +K+L+ +
Sbjct: 63  LHMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLPIE----QALTKKGVKRKELSIA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYA 279
           + R K   FA   +  Q   FKR GV  D+NNPY+TL PEYEAAQ   + E      IY 
Sbjct: 119 EFRKKCEAFALEQIDNQKKDFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYK 178

Query: 280 VFRMVSAPPSTSGLLNE-------------------------FLPDLGLAVWTTTPWTVP 314
             + V   PS+   L E                            D    +WTTTPWT+P
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYQDKRSPSIYVAFDVIDGKGIVDDDAQFIIWTTTPWTLP 238

Query: 315 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VASDLVPT 371
           +N A+ V+  L Y    +                          K +II   +ASD+   
Sbjct: 239 SNVAITVHPDLTYGQYNVNG------------------------KKYIIGKDLASDVAEA 274

Query: 372 LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQ 431
           L+    T L ++K   G DLE  +  HP  +R+  +VI G ++TT++GTG VHTAPGHG+
Sbjct: 275 LDWDEDT-LELEKEFKGKDLEYIKAQHPFFDRES-LVINGLHVTTDAGTGCVHTAPGHGE 332

Query: 432 EDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 491
           +DY+   KY LP++SPVDD+G FT+EAG+F G+      N  +   L E  SL+  E   
Sbjct: 333 DDYIVGQKYNLPVISPVDDKGVFTDEAGQFEGM-FYDKANKEITDLLKEDGSLLKLEFIT 391

Query: 492 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 532
           H YP+DWRTKKP IFRAT QWFAS++  R+  + AI   ++
Sbjct: 392 HSYPHDWRTKKPVIFRATPQWFASIDKVREDILSAIDDTQF 432



 Score =  228 bits (580), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 188/338 (55%), Gaps = 31/338 (9%)

Query: 533 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 591
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN+ D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNP 664

Query: 592 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 651
             ++I+  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAIAEKDLLEVDKYLLNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 652 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 711
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P           E
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIPHV-------EEE 777

Query: 712 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 771
            V  +  P   E  + F    +  W   ++LR +VN+ LEVAR  K+IG SLEAKV + +
Sbjct: 778 SVHLTNMPERVEIDQAF----VDRWNTFMKLRDDVNRALEVARNEKVIGKSLEAKVVIGS 833

Query: 772 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 831
           ++   A+   +          LQ++FI SQ EV+    +G+       G+          
Sbjct: 834 NENFDATTFLQQFK------DLQQLFITSQAEVVDKVDDGVAYQ---HGD---------- 874

Query: 832 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           I +  A G KCERCWNYS ++GS  E   LC RC  V+
Sbjct: 875 IRIEHAHGEKCERCWNYSEELGSVGELDNLCPRCQAVV 912


>sp|Q5L0V9|SYI_GEOKA Isoleucine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
           GN=ileS PE=3 SV=1
          Length = 924

 Score =  335 bits (858), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 188/459 (40%), Positives = 257/459 (55%), Gaps = 59/459 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPKTDFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYAV 280
            R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA Q   + E      IY  
Sbjct: 120 FRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 281 FRMVSAPPSTSGLLNE-------------------------FLPDLGLAVWTTTPWTVPA 315
            + V   PS+   L E                            D  + +WTTTPWT+PA
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPVKNGKGVLEGDERIVIWTTTPWTIPA 239

Query: 316 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 375
           N A+AV+  L Y VV++       +AA A   ++                       E  
Sbjct: 240 NLAIAVHPDLDYHVVDVSGKRYVVAAALAESVAK-----------------------EIG 276

Query: 376 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 435
           W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++
Sbjct: 277 WDAWSVV-KTVKGKELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFL 334

Query: 436 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 495
              KYGLP+L PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+      H YP
Sbjct: 335 VGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKLGFITHSYP 393

Query: 496 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           +DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 394 HDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  209 bits (532), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 193/341 (56%), Gaps = 29/341 (8%)

Query: 533 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 592
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 593 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 651
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 652 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 711
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E+  + +
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRRENVESVQ 780

Query: 712 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 768
                +   +D        GE   +  W   +++R ++ K LE AR  K+IG SL A V 
Sbjct: 781 LTDMPEPIAID--------GEEALLAKWDAFMDVRDDIFKALENARNEKVIGKSLTASVI 832

Query: 769 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 828
           ++  D +     R++  A  DAD L+++ I+S   +     +      P   E L    D
Sbjct: 833 VYPKDEA-----RKLL-ASLDAD-LRQLLIVSAFSIADEPYDA----APAEAERL----D 877

Query: 829 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            V + V  AEG  CERCW  + +VG+   HPTLC RC  ++
Sbjct: 878 HVAVIVRPAEGETCERCWTVTKEVGADPSHPTLCPRCAHIV 918


>sp|A4IM25|SYI_GEOTN Isoleucine--tRNA ligase OS=Geobacillus thermodenitrificans (strain
           NG80-2) GN=ileS PE=3 SV=1
          Length = 924

 Score =  334 bits (857), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/461 (40%), Positives = 260/461 (56%), Gaps = 63/461 (13%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  +   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGFCAPYVPGWDTHGLPIETALTKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYAV 280
            R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA Q   + E      IY  
Sbjct: 120 FRKLCEQYAYEQIDNQRQQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 281 FRMVSAPPSTSGLLNE-------------------------FLPDLGLAVWTTTPWTVPA 315
            + V   PS+   L E                            D  + +WTTTPWT+PA
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKRSPSIYVAFPVKDGKGVLQGDERIVIWTTTPWTIPA 239

Query: 316 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--E 373
           N A+AV+  L Y +VE            AN +               +VA+ L  ++  E
Sbjct: 240 NLAIAVHPDLDYYIVE------------ANGQK-------------YVVAAALAESVAKE 274

Query: 374 AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 433
             W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D
Sbjct: 275 VGWEAWSVV-KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDD 332

Query: 434 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 493
           ++   KYGLP+L PVD+ G  TEEA  F+G+    + N A+ + L+E  +L+      H 
Sbjct: 333 FIVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYDEANKAITQKLEEVGALLKLSFITHS 391

Query: 494 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           YP+DWRTK+PTIFRAT QWFAS++  R   +DAI + KWVP
Sbjct: 392 YPHDWRTKQPTIFRATTQWFASIDKIRDQLLDAIKETKWVP 432



 Score =  199 bits (507), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 533 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 592
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 593 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 651
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPVGELGELDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 652 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 711
           KD LY        RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E   + +
Sbjct: 723 KDILYIEAADCRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRKEQVESVQ 780

Query: 712 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 768
                +   +D        GE   +  W   +++R ++ K LE AR  K+IG SL A V 
Sbjct: 781 LTDMPEPMAID--------GEEALLAKWDAFMDVRDDILKALENARNEKVIGKSLTASVT 832

Query: 769 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 828
           ++  D      +R +  + +  + L+++ I+S   V   + +      P   E L    +
Sbjct: 833 VYPKD-----EVRALLASIN--EDLRQLLIVSAFSVADESYDA----APAEAERL----N 877

Query: 829 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
            V + V  AEG  CERCW  +  VG    HPTLC RC  ++
Sbjct: 878 HVAVIVRPAEGETCERCWTVTPDVGRDESHPTLCPRCAHIV 918


>sp|C0ZG86|SYI_BREBN Isoleucine--tRNA ligase OS=Brevibacillus brevis (strain 47 / JCM
           6285 / NBRC 100599) GN=ileS PE=3 SV=1
          Length = 925

 Score =  333 bits (854), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 183/461 (39%), Positives = 260/461 (56%), Gaps = 62/461 (13%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   REP++  +W++  ++ +V D+  D  +FVLHDGPPYANG+
Sbjct: 3   YSKTLALPKTEFPMRGNLPSREPQMQAVWEEQNIYQQVLDRTKDRPSFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL--QSLDEDAKKDLTPS 222
           +H+GHALNKILKD I RYK +  +   Y+PGWD HGLPIE  ++  Q LD   ++ +  +
Sbjct: 63  IHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAIINAQGLD---RRSIEVN 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYA 279
             R +  ++A + +  Q   FKR GV  DW NPY+TL PEYEA Q   + E      IY 
Sbjct: 120 DFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYK 179

Query: 280 VFRMVSAPPSTSGLL-------------------------NEFLPDLGLAVWTTTPWTVP 314
             R V   PS+   L                          +   + G+ +WTTTPWT+P
Sbjct: 180 GLRCVYWSPSSETALADAEIEYKDKRSPSIYVSFQVADGKGKLDIETGVVIWTTTPWTLP 239

Query: 315 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 374
           AN A++++ +L+Y VV++                       D +K   +VA+ L+     
Sbjct: 240 ANLAISLHPELEYNVVKV-----------------------DGRK--FLVANGLIEAASK 274

Query: 375 KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 433
           + G + V I  T  G +LE     HP  +R+ P+++ G+++T ++GTG VHTAPGHG++D
Sbjct: 275 EIGWEGVEILATFKGQELEGVETQHPFYDRKSPLIL-GEHVTLDAGTGCVHTAPGHGEDD 333

Query: 434 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 493
           +    KY L +L PVD EGK T EA  F GL    D N  + + L E  +L+    + H 
Sbjct: 334 FNVGQKYNLGVLCPVDHEGKMTNEAPGFEGL-FYEDANKVITEKLKENGALLKLSFFTHS 392

Query: 494 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           YP+DWRTKKP I+RATEQWFAS++GFR   ++AI  VKW+P
Sbjct: 393 YPHDWRTKKPVIYRATEQWFASIDGFRTQMLEAIKNVKWIP 433



 Score =  220 bits (561), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 188/339 (55%), Gaps = 28/339 (8%)

Query: 533 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 591
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKMGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNP 663

Query: 592 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 651
             + ++Y++L  +D+Y L +   + K  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 ATDRVAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 652 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 711
           KDRLY     S  RR+ QTV+   LLS+V+++AP+LPH A++VW  +P       G   +
Sbjct: 724 KDRLYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIP-------GVEEK 776

Query: 712 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 771
            V  +  P  DE+  +F       W   L +R EV K +E AR  K+ G+S++AK+ L+ 
Sbjct: 777 SVQLTDMPEGDEQHLSFAAEAESKWDAFLAIRDEVLKAMEEARRNKVFGNSVDAKLALYP 836

Query: 772 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLP-STPNGLIRNIPYSGEYLVEGKDKV 830
               +A  L  M       D L  +FI++ V+V   S P   ++         +EG   V
Sbjct: 837 QTEEVAKTLAAM-------DDLADLFIVAHVDVHSGSAPAEAVQ---------LEGIAAV 880

Query: 831 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
              VS A+G KCERC      VG+   H +LC RC +V+
Sbjct: 881 ---VSAADGGKCERCRVVKPDVGTRESHASLCVRCADVV 916


>sp|Q6HER9|SYI1_BACHK Isoleucine--tRNA ligase 1 OS=Bacillus thuringiensis subsp.
           konkukian (strain 97-27) GN=ileS1 PE=3 SV=1
          Length = 921

 Score =  332 bits (850), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 190/466 (40%), Positives = 265/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|C1EPQ9|SYI_BACC3 Isoleucine--tRNA ligase OS=Bacillus cereus (strain 03BB102) GN=ileS
           PE=3 SV=1
          Length = 921

 Score =  332 bits (850), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 190/466 (40%), Positives = 265/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 192/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-TAEMKTMLESI------NEDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|Q636D1|SYI1_BACCZ Isoleucine--tRNA ligase 1 OS=Bacillus cereus (strain ZK / E33L)
           GN=ileS1 PE=3 SV=1
          Length = 921

 Score =  331 bits (849), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 265/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 31/347 (8%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY-- 702
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P     
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 703 TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 762
           +++     E V       L  KW  F           + LR +V K LEVAR  K+IG S
Sbjct: 776 SVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEVARNEKVIGKS 824

Query: 763 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 822
           L A + L+       + ++ M  + +  + L+++FI+S+ ++      G++   P     
Sbjct: 825 LNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GGMMEEAPADAPK 872

Query: 823 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
                +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 873 Y----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|B7JJY2|SYI_BACC0 Isoleucine--tRNA ligase OS=Bacillus cereus (strain AH820) GN=ileS
           PE=3 SV=1
          Length = 921

 Score =  331 bits (849), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 265/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|B8FT35|SYI_DESHD Isoleucine--tRNA ligase OS=Desulfitobacterium hafniense (strain
           DCB-2 / DSM 10664) GN=ileS PE=3 SV=1
          Length = 922

 Score =  331 bits (848), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 179/459 (38%), Positives = 260/459 (56%), Gaps = 58/459 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYATVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPE-GHVSRS--IYAVF 281
           R    ++AK  +  Q   FKR GV  DW NPYLTL+ EYEAAQ    G ++R   IY   
Sbjct: 122 RRMCKEYAKKYISIQKEQFKRLGVRGDWQNPYLTLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 282 RMVSAPPSTSGLLNE------------------------FLPDLG--LAVWTTTPWTVPA 315
           + V   PS    L E                         L D    + +WTTTPWT+PA
Sbjct: 182 KPVYWCPSCETALAEAEIEYAEKTSHAIYVKFPVKEGKGVLTDENTFVIIWTTTPWTLPA 241

Query: 316 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 375
           N A+ ++ +  Y  V+++                         K   +VA  ++ +L + 
Sbjct: 242 NLAITLHEEFSYVQVQVE-------------------------KEHWLVAEGMLESLRSL 276

Query: 376 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 435
           W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG+ED+ 
Sbjct: 277 WNLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEEDFN 335

Query: 436 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 495
              KYGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y 
Sbjct: 336 VGKKYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEDKIKHSYA 394

Query: 496 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 395 HCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  221 bits (563), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 534 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 592
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 593 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 652
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 653 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 712
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVPGV------PAGSH 778

Query: 713 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 772
           V   + P    +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 VQTEEMPEALPQWLDEALEKK--WDTLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 773 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 829
           +A L   LR +         L  IFI+S V++  +    P GL          + E    
Sbjct: 836 NAELEGFLRGI-------PNLSEIFIVSAVQLHSAGEEKPEGL---------SMAEDLAG 879

Query: 830 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
             I V+ A G KCERCW Y T VG   EHPTLC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPTLCPRCASVVS 920


>sp|Q732H4|SYI1_BACC1 Isoleucine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 10987)
           GN=ileS1 PE=3 SV=1
          Length = 921

 Score =  331 bits (848), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 265/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 31/347 (8%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY-- 702
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P     
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 703 TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 762
           +++     E V       L  KW  F           + LR +V K LEVAR  K+IG S
Sbjct: 776 SVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEVARNEKVIGKS 824

Query: 763 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 822
           L A + L+       + ++ M  + +  + L+++FI+S+ ++      G++   P     
Sbjct: 825 LNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GGMMEEAPADAPK 872

Query: 823 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
                +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 873 Y----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|Q24TH1|SYI_DESHY Isoleucine--tRNA ligase OS=Desulfitobacterium hafniense (strain
           Y51) GN=ileS PE=3 SV=1
          Length = 922

 Score =  331 bits (848), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 179/459 (38%), Positives = 260/459 (56%), Gaps = 58/459 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYATVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPE-GHVSRS--IYAVF 281
           R    ++AK  +  Q   FKR GV  DW NPYLTL+ EYEAAQ    G ++R   IY   
Sbjct: 122 RRMCKEYAKKYISIQKEQFKRLGVRGDWKNPYLTLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 282 RMVSAPPSTSGLLNE------------------------FLPDLG--LAVWTTTPWTVPA 315
           + V   PS    L E                         L D    + +WTTTPWT+PA
Sbjct: 182 KPVYWCPSCETALAEAEIEYAEKTSHAIYVKFPVKEGKGVLTDENTFVIIWTTTPWTLPA 241

Query: 316 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 375
           N A+ ++ +  Y  V+++                         K   +VA  ++ +L + 
Sbjct: 242 NLAITLHEEFSYVQVQVE-------------------------KEHWLVAEGMLESLRSL 276

Query: 376 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 435
           W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG+ED+ 
Sbjct: 277 WNLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEEDFN 335

Query: 436 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 495
              KYGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y 
Sbjct: 336 VGKKYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEDKIKHSYA 394

Query: 496 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
           + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 395 HCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  221 bits (563), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 534 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 592
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 593 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 652
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 653 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 712
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVPGV------PAGSH 778

Query: 713 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 772
           V   + P    +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 VQTEEMPEALPQWLDEALEKK--WDTLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 773 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 829
           +A L   LR +         L  IFI+S V++  +    P GL          + E    
Sbjct: 836 NAELEGFLRGI-------PNLSEIFIVSAVQLHSAGEEKPEGL---------SMAEDLAG 879

Query: 830 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
             I V+ A G KCERCW Y T VG   EHPTLC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPTLCPRCASVVS 920


>sp|C3L730|SYI_BACAC Isoleucine--tRNA ligase OS=Bacillus anthracis (strain CDC 684 /
           NRRL 3495) GN=ileS PE=3 SV=1
          Length = 921

 Score =  330 bits (846), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFSVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|C3P665|SYI_BACAA Isoleucine--tRNA ligase OS=Bacillus anthracis (strain A0248)
           GN=ileS PE=3 SV=1
          Length = 921

 Score =  330 bits (846), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFSVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|Q81WE4|SYI1_BACAN Isoleucine--tRNA ligase 1 OS=Bacillus anthracis GN=ileS1 PE=3 SV=1
          Length = 921

 Score =  330 bits (846), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFSVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 53/358 (14%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 695
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 696 ----QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
                ++P A  L+D  A           L  KW  F           + LR +V K LE
Sbjct: 776 SVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MTLRDDVLKALE 813

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
           VAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+ ++      G
Sbjct: 814 VARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSEYKL-----GG 861

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
           ++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 862 MMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|B9IVX2|SYI_BACCQ Isoleucine--tRNA ligase OS=Bacillus cereus (strain Q1) GN=ileS PE=3
           SV=1
          Length = 921

 Score =  330 bits (845), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++     G+                       I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----GEK---------------------YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 31/347 (8%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY-- 702
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P     
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 703 TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 762
           +++     E V       L  KW  F           + LR +V K LEVAR  K+IG S
Sbjct: 776 SVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEVARNEKVIGKS 824

Query: 763 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 822
           L A + L+   A + + L  +       + L+++FI+S+ ++      G++   P     
Sbjct: 825 LNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGMMEEAPADAPK 872

Query: 823 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
                +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 873 Y----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|B7HLM9|SYI_BACC7 Isoleucine--tRNA ligase OS=Bacillus cereus (strain AH187) GN=ileS
           PE=3 SV=1
          Length = 921

 Score =  330 bits (845), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+YA+V++     G+                       I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYAIVKVN----GEK---------------------YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 31/347 (8%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY-- 702
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P     
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 703 TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 762
           +++     E V       L  KW  F           + LR +V K LEVAR  K+IG S
Sbjct: 776 SVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEVARNEKVIGKS 824

Query: 763 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 822
           L A + L+   A + + L  +       + L+++FI+S+ ++      G++   P     
Sbjct: 825 LNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGMMEEAPADAPK 872

Query: 823 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
                +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 873 Y----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>sp|B7IUQ5|SYI_BACC2 Isoleucine--tRNA ligase OS=Bacillus cereus (strain G9842) GN=ileS
           PE=3 SV=1
          Length = 921

 Score =  329 bits (844), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/466 (40%), Positives = 264/466 (56%), Gaps = 71/466 (15%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQY-------PEGHVS 274
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA Q         +G++ 
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 275 RSIYAVFRMVSAPPSTSGLL------------------------NEFLPDLGLAVWTTTP 310
           +    V+    +P S S L                         N    D    +WTTTP
Sbjct: 178 KGQKPVYW---SPTSESALAEAEIEYQDKKSASIYVAFPVKDGKNVLEGDEKYIIWTTTP 234

Query: 311 WTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP 370
           WT+PAN  ++V+ +L+Y++V++                       D+K    I+AS+L  
Sbjct: 235 WTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFE 269

Query: 371 TLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 428
           T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 TVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 327

Query: 429 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 488
           HG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L+   
Sbjct: 328 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 386

Query: 489 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 534
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 387 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (548), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 196/349 (56%), Gaps = 35/349 (10%)

Query: 526 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 585
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 586 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 644
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 645 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF---- 700
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P     
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 701 AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIG 760
           +  L D   A  +++++   L  KW  F           + LR +V K LEVAR  K+IG
Sbjct: 776 SVQLTDMPEAVQLYDAE--ALKTKWDAF-----------MTLRDDVLKALEVARNEKVIG 822

Query: 761 SSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSG 820
            SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G++   P   
Sbjct: 823 KSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGMMEEAPADA 870

Query: 821 EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 869
                  +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 871 PKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 333,998,157
Number of Sequences: 539616
Number of extensions: 14671127
Number of successful extensions: 46284
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2032
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 35596
Number of HSP's gapped (non-prelim): 5899
length of query: 881
length of database: 191,569,459
effective HSP length: 126
effective length of query: 755
effective length of database: 123,577,843
effective search space: 93301271465
effective search space used: 93301271465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)