Query 002787
Match_columns 881
No_of_seqs 368 out of 2895
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 17:40:03 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002787.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1502-1505//hhsearch_pdb/002787hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fhf_A Pullulanase; multiple d 1.0 1 1 1175.7 46.1 758 88-874 171-980 (1083)
2 4aio_A Limit dextrinase; hydro 1.0 1 1 1137.7 56.4 757 90-876 2-790 (884)
3 3faw_A Reticulocyte binding pr 1.0 1 1 780.3 40.1 526 194-874 119-725 (877)
4 2wan_A Pullulanase; hydrolase, 1.0 1 1 770.1 46.6 520 191-874 297-848 (921)
5 2ya1_A Putative alkaline amylo 1.0 1 1 755.1 36.6 521 199-873 311-922 (1014)
6 2ya0_A Putative alkaline amylo 1.0 1 1 726.2 38.2 521 199-873 4-615 (714)
7 2e8y_A AMYX protein, pullulana 1.0 1 1 725.6 38.1 511 197-873 93-636 (718)
8 1bf2_A Isoamylase; hydrolase, 1.0 1 1 675.3 37.0 501 206-870 3-645 (750)
9 2vr5_A Glycogen operon protein 1.0 1 1 672.0 41.5 488 206-862 16-600 (718)
10 2wsk_A Glycogen debranching en 1.0 1 1 664.0 28.5 488 206-871 8-580 (657)
No 1
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=1.00 E-value=1 Score=1175.70 Aligned_cols=758 Identities=37% Similarity=0.664 Sum_probs=671.5
Q ss_pred CCCCCCCEEEEEECCEEEEECCCCCCEEEEEEECCCCEEEECCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCEEEE
Q ss_conf 56745660498768978873689997399997078882541260205630899511589998456620885356710560
Q 002787 88 GDSLLYSRAYWVSESIIAWNVDVPDGSCYLYASRTAALSISYGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFKV 167 (881)
Q Consensus 88 ~~~~~~~~a~w~~~~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~p~l~~~~~~~~ 167 (881)
+++|.+++|||+|++||+|+......+++||+|++++|+++++++.+++ +|+|++ .+|+++++++||||++|.+|++
T Consensus 171 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~p~l~~~~~~~~ 247 (1083)
T 2fhf_A 171 AFGVALADAHWVDKTTLLWPGGENKPIVRLYYSHSSKVAADSNGEFSDK-YVKLTP--TTVNQQVSMRFPHLASYPAFKL 247 (1083)
T ss_dssp GGSBCCCCEEEEETTEEECGGGTTCSEEEEEEESSSCCCCCTTSBCCSE-EEECEE--ECCCHHHHHHCGGGTTSCEEEC
T ss_pred CCCCCCCEEEEEECCEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCC-EEEECC--CCCCHHHHHCCCCCCCCEEEEC
T ss_conf 4453343699711898998447887458988527787366135412686-798347--8889778641743025444866
Q ss_pred CCCCCHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHCCCCCCC---CCCCEEECCEEEEEEECCCCCEEEEEEEECCC
Q ss_conf 7971168888741110----2562234445444000000148999---99528949926999996999908999740899
Q 002787 168 PAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELFSYDG---PLGALYAEETVSLYLWAPTAQSVSACIYRDPL 240 (881)
Q Consensus 168 ~~~~~~~~~l~~ql~~----~~g~~~~~t~vq~~~~lD~~y~~~~---~LGa~~~~~~vtf~lWAPtA~~V~L~ly~~~~ 240 (881)
+...+++.+||+||+| ++|.+..+|+||++++||++|+|++ +|||++.+++++|+||||+|++|+|++|+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~d~~~~~~g~~~~lGa~~~~~gv~F~vwAP~A~~V~L~l~d~~~ 327 (1083)
T 2fhf_A 248 PDDVNVDELLQGETVAIAAESDGILSSATQVQTAGVLDDTYAAAAEALSYGAQLTDSGVTFRVWAPTAQQVELVIYSADK 327 (1083)
T ss_dssp CTTCCHHHHTTSEEEEEEECTTSBEEEEEEEECHHHHHHHHHHHHHTSCCEEEEETTEEEEEEECTTCSEEEEEEECTTC
T ss_pred CCHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCCC
T ss_conf 73566677630334899863788334434430353013333578875786029979928999999999989999982799
Q ss_pred CCCCCEEEECC--CCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 99972688414--6998899991899998479999996138986323024048552124458983158609999989874
Q 002787 241 GGNPLEVVQLK--ENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEG 318 (881)
Q Consensus 241 ~~~~~~~~~M~--~~~GvWsv~i~~~~~G~~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~ng~~s~vvDl~~~~~~P~~ 318 (881)
. ....++|. ...|||++.+++.+.|.+|+|+|++++|.+|+++..+++||||++++.++.+|+++|++++.++|++
T Consensus 328 ~--~~~~~~m~~~~~~GvW~~~v~~~~~G~~Y~y~v~~~~p~~g~~~~~~~~DPYa~~~~~~~~~s~v~d~~~~~~~p~~ 405 (1083)
T 2fhf_A 328 K--VIASHPMTRDSASGAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYSQVVDLNDSALKPEG 405 (1083)
T ss_dssp C--EEEEEECEECTTTCEEEEEECGGGTTCEEEEEEEEEETTTTEEEEEEECCTTCSCBCGGGSSEECBCTTCGGGSCTT
T ss_pred C--CCCEEECEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCEECCCCCCCEEECCCCCCCCCCC
T ss_conf 8--65138782879998899997889999989999986337788425615338741102568776457446324468700
Q ss_pred CCCCCCCCCC-CCCCCCC---EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 3322358998-9999986---39999804410269999999775522100121013455889998798579937423468
Q 002787 319 WDKLVYEKPD-ILSFSDI---SIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFA 394 (881)
Q Consensus 319 W~~~~~~~P~-~~~~~d~---vIYElHVRdFs~~d~s~~~~~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ 394 (881)
|... ++|. ..++++. ||||+|||+|+..++++++.+||||+||+++.+.+|+||+||++||||||||||||+++
T Consensus 406 W~~~--~~p~~~~~~~~~~~~vIYE~hvr~ft~~~~~~~~~~~Gt~~g~~e~~~~~i~~L~~L~~lGvt~i~LlPv~~~~ 483 (1083)
T 2fhf_A 406 WDGL--TMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQHLKQLSASGVTHIELLPVFDLA 483 (1083)
T ss_dssp GGGC--CCSSCCSSHHHHHTCEEEEECHHHHHTTCTTSCGGGTTSGGGGGCTTSHHHHHHHHHHHHTCCEEEESCCEEES
T ss_pred CCCC--CCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 1025--67644565101456579998102320889998857897865532210436788999986698879989854145
Q ss_pred CCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCC----CCCCCC
Q ss_conf 77853333333588----9873113667786420000037666302565402999986799998741389----999988
Q 002787 395 GVDDRKENWKSVGS----LPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQND----DGYNWG 466 (881)
Q Consensus 395 ti~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~----d~~nWG 466 (881)
+|+|.+..+.++++ +|++.....| +.++.+|. .+.++..+|..+++++.+||+++..+++. |+||||
T Consensus 484 ~v~e~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~l~~y~~~~d~~nwG 558 (1083)
T 2fhf_A 484 TVNEFSDKVADIQQPFSRLCEVNSAVKS--SEFAGYCD---SGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWG 558 (1083)
T ss_dssp SSCCCGGGCCCTTSBHHHHHHHCHHHHT--STTGGGTT---SSCBHHHHHHHHSTTCBTTBCHHHHHHHHHTTSSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC---CCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 5455532222335642100123421112--22222233---322100111013655410001122221011356777778
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCC-CCCC
Q ss_conf 875868886899999999982179999999999651-98999985013457999998888657778987132399-9950
Q 002787 467 YNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHI-GLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNS-DGFI 544 (881)
Q Consensus 467 Ydp~~y~apegsYgt~~~g~~ri~Efr~mV~alH~~-GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~-~G~~ 544 (881)
|||.+||+|+++||++|++..|++|||+||++||++ ||+||||||||||+..+++...+.+++.+|+||++.++ +|.+
T Consensus 559 Yd~~~y~a~~~~yGt~p~~~~r~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~ 638 (1083)
T 2fhf_A 559 YDPFHYTVPEGSYATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSV 638 (1083)
T ss_dssp CCEEEEEEECSTTSSCCSTTHHHHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCB
T ss_pred CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCE
T ss_conf 88676777684223798766539999999999876239789998424557677763200024678887236358778954
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 14778788877896899999999999999478009998477844188999999999810101467789720899602787
Q 002787 545 EHSTCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDF 624 (881)
Q Consensus 545 ~~stc~~d~a~e~~mv~kliiDsl~~W~~eygIDGFRfDlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~ 624 (881)
.+++||.|++++|++|+++|+|++++|+++|||||||||+|+++++++|.+++.++++++| +++++||+|+.
T Consensus 639 ~~~tg~~dln~~~p~Vr~~i~d~l~~W~~e~gVDGfR~D~a~~~~~~~~~~~~~~l~~~~p--------~~~ligE~w~~ 710 (1083)
T 2fhf_A 639 ESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKALNP--------DIYFFGEGWDS 710 (1083)
T ss_dssp CCTTSSEEBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHTTCT--------TCEEEECCCCC
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCC--------CEEEEEEECCC
T ss_conf 0577657767599999999999999999972975899967023899999999999997688--------84999710357
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 521236677765344678884020256889976279999997----5323201234589999999767999999998877
Q 002787 625 GEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPP----LQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDH 700 (881)
Q Consensus 625 gev~~~~~~~~a~q~nl~gtgig~fnDr~Rdavrgg~~F~~~----~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~ 700 (881)
++ ..++.++.|.++.+++|+.|||++|++++++.+|... ..+||..|++.+|++... .+..++....|+
T Consensus 711 ~~---~~~~~~a~q~~~~g~~ig~fnd~~Rd~vr~~~~F~~g~~l~~~~gf~~G~~~~p~~~~~----~~a~rl~~~~d~ 783 (1083)
T 2fhf_A 711 NQ---SDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQGVGSGAGVLPNELTT----LSDDQARHLADL 783 (1083)
T ss_dssp SC---TTTSCBCCTTTTTTSSCEEECHHHHHHHHCSCTTCCTTHHHHCCCGGGTTTTSCCSSCC----CCHHHHHHHHHH
T ss_pred CC---CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHH----HHHHHHHCHHHH
T ss_conf 65---43123444540368734556499999974667654555422233311112135553107----888875120455
Q ss_pred HHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCC-----------------
Q ss_conf 886310110010002467862126743325999854358988517862115651055441178-----------------
Q 002787 701 IQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSLK----------------- 763 (881)
Q Consensus 701 i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~g~p~~ya~~P~~~INYVs~HDn~tL~D~l~~k----------------- 763 (881)
++.+|+|+|.+|.+.+.+|..++|+.. .|++++.+|+..|..++||++|||++||+|.++++
T Consensus 784 ~~~~~~g~l~~f~~~~~~g~~l~gs~~-~y~~~~~~~~~~p~~~infl~nHD~~rL~D~vs~~~~~~~~~~~r~r~~kla 862 (1083)
T 2fhf_A 784 TRLGMAGNLADFVLIDKDGAVKRGSEI-DYNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVS 862 (1083)
T ss_dssp HHHHHTTCBTTCEEECTTSCEEEGGGS-EETTEESCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHH-HHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 554200012221100233200124133-3133421113681121464316786616455443067753368999999999
Q ss_pred --------CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf --------901585384222468999999999998643137778899888999876678886444676799999851233
Q 002787 764 --------GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSH 835 (881)
Q Consensus 764 --------GiPfiy~GdE~lrSks~drdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~ 835 (881)
||||||||+|+||++.+++|+||++||+|+++|+.++|+|+.|+|++.+|+..|..+.+. .+++++++..+
T Consensus 863 ~alLlts~GiP~IY~GdEiG~t~~gn~n~Y~~~d~~n~~dW~~~dN~ws~g~p~~~~~~~~W~~~~~~-~~~nv~~q~~d 941 (1083)
T 2fhf_A 863 LATVMLGQGIAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARV-KDAVATPGETE 941 (1083)
T ss_dssp HHHHHTSSSEEEEETTGGGTCCCTTCSCCTTSHHHHHCCCTTCSCCSCSSSCCCHHHHGGGHHHHHHH-TTSSCCCCHHH
T ss_pred HHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC-CCCCCCCCCCC
T ss_conf 99998778972998303207767866685246432355666656765544566444555781111543-34431112038
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 999999999999978139433368878886023222468
Q 002787 836 ILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSCL 874 (881)
Q Consensus 836 ~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~~ 874 (881)
..++++++|+||+|||++|+||.|+.++|.+++.|++..
T Consensus 942 ~~sl~~f~r~LI~LRk~~paLr~g~~~~i~~~v~~~~~~ 980 (1083)
T 2fhf_A 942 LKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTG 980 (1083)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGGCCCHHHHHHHEEEESCS
T ss_pred HHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEEECCC
T ss_conf 999999999999998629775078643236338995689
No 2
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=1.00 E-value=1 Score=1137.73 Aligned_cols=757 Identities=65% Similarity=1.125 Sum_probs=697.9
Q ss_pred CCCCCEEEEEECCEEEEECC-CCCCEEEEEEECCCCEEEE--CCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCEEE
Q ss_conf 74566049876897887368-9997399997078882541--26020563089951158999845662088535671056
Q 002787 90 SLLYSRAYWVSESIIAWNVD-VPDGSCYLYASRTAALSIS--YGGIQGADVEIELQEDKGGLPANVIEKFPHIRDYKAFK 166 (881)
Q Consensus 90 ~~~~~~a~w~~~~~~~w~~~-~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~l~~~~~~~~p~l~~~~~~~ 166 (881)
.|++|+|||||++||+|+++ .++.+++||+|++|+|+++ +++|+|++..|+|++.+++|+++|+++||||++|+||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (884)
T 4aio_A 2 FMPDARAYWVTSDLIAWNVGELEAQSVCLYASRAAAMSLSPSNGGIQGYDSKVELQPESAGLPETVTQKFPFISSYRAFR 81 (884)
T ss_dssp CCCCCCEEEEETTEEEECCCTTTCSEEEEEEETTCCCBCCTTTCSCBSCSEEEEEEEETTCCCHHHHHHCGGGTTSEEEE
T ss_pred CCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEECCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEE
T ss_conf 75666679971880786278888866999975888824515788330577505864278888987885197635784023
Q ss_pred ECCCCCHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEEECCCCC
Q ss_conf 07971168888741110----25622344454440000001489999952894992699999699990899974089999
Q 002787 167 VPAGSDAKLLLKCQLAV----ADRKCSDATGLQLPGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGG 242 (881)
Q Consensus 167 ~~~~~~~~~~l~~ql~~----~~g~~~~~t~vq~~~~lD~~y~~~~~LGa~~~~~~vtf~lWAPtA~~V~L~ly~~~~~~ 242 (881)
++...+++++||+||+| ++|.++++|+||++||||++|+|++||||++.+++|+|+||||+|++|+|++|+...+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~d~~~~y~~plGa~~~~~g~~F~vwAp~A~~V~l~l~~~~~~- 160 (884)
T 4aio_A 82 VPSSVDVASLVKCQLVVASFGADGKHVDVTGLQLPGVLDDMFAYTGPLGAVFSEDSVSLHLWAPTAQGVSVCFFDGPAG- 160 (884)
T ss_dssp CCTTSCHHHHTTSEEEEEEECTTSSEEEEEEEECHHHHHHHHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEESTTTS-
T ss_pred CCCCCCHHHHHHCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEEECCCC-
T ss_conf 6774328888531668999879997762034665762213203599966779899999999999999899998958999-
Q ss_pred CCCEEEECCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 97268841469988999918999984799999961389863230240485521244589831586099999898743322
Q 002787 243 NPLEVVQLKENDGVWSIKGPKSWEGCYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKL 322 (881)
Q Consensus 243 ~~~~~~~M~~~~GvWsv~i~~~~~G~~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~ng~~s~vvDl~~~~~~P~~W~~~ 322 (881)
...+.++|++.+|+|++++++...|.+|+|+|++++|..+++...+++||||++++.++.+|+++|++...++|.+|+..
T Consensus 161 ~~~~~~~~~~~~g~W~~~~~~~~~g~~Y~y~v~~~~~~~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (884)
T 4aio_A 161 PALETVQLKESNGVWSVTGPREWENRYYLYEVDVYHPTKAQVLKCLAGDPYARSLSANGARTWLVDINNETLKPASWDEL 240 (884)
T ss_dssp CEEEEEECEEETTEEEEEEEGGGTTCEEEEEEEEEETTTTEEEEEEECCTTCSEESGGGSSEECCCTTCGGGSCTTGGGG
T ss_pred CEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 74441005387998999989888998899999477887353257621478864664689871676686675486100302
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 35899899999863999980441026999999977552210012101345588999879857993742346877853333
Q 002787 323 VYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKEN 402 (881)
Q Consensus 323 ~~~~P~~~~~~d~vIYElHVRdFs~~d~s~~~~~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~ 402 (881)
...+|...+++++||||+|||+||+.++++++..||||+|++++.+..++||+|||+||||||||||||+++++++....
T Consensus 241 ~~~~p~~~~~~~~vIYE~HVr~ft~~~~~~~~~~~Gtf~g~~~~~~~~ie~L~yLk~LGVtaveLmPv~e~~~~~~~~~~ 320 (884)
T 4aio_A 241 ADEKPKLDSFSDITIYELHIRDFSAHDGTVDSDSRGGFRAFAYQASAGMEHLRKLSDAGLTHVHLLPSFHFAGVDDIKSN 320 (884)
T ss_dssp GGTSCCCSCGGGCCEEEECHHHHHTTCTTSCTTTTTSGGGGSCTTSHHHHHHHHHHHHTCCEEEECCCEEESSSCSCGGG
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 23467899931288999975711357888774556763553441045777767999709877996666656765544456
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33358898731136677864200000376663025654029999867999987413899999888758688868999999
Q 002787 403 WKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASN 482 (881)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~ 482 (881)
.... +...+..+.++++++|+++.+++..+.+||||||.+||+|+++|||+
T Consensus 321 ~~~~-----------------------------d~~~l~~~~~~~~~~~~l~~~~~~~~~~~WGYd~~~y~a~~~~ygt~ 371 (884)
T 4aio_A 321 WKFV-----------------------------DECELATFPPGSDMQQAAVVAIQEEDPYNWGYNPVLWGVPKGSYASD 371 (884)
T ss_dssp CCCC-----------------------------CHHHHTTSCTTCSHHHHHHHHHTTTSSCCCCCCEEEEEEECGGGSSC
T ss_pred CCCC-----------------------------CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4322-----------------------------22223455775677776666654223455076756135787654568
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99982179999999999651989999850134579999988886577789871323999950147787888778968999
Q 002787 483 PNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVER 562 (881)
Q Consensus 483 ~~g~~ri~Efr~mV~alH~~GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~stc~~d~a~e~~mv~k 562 (881)
++++.|+.|||+||++||++||+||||||||||+..++|+..+..++..|.||++...+|.+.+.+||++++++|+++++
T Consensus 372 ~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts~~h~wf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 451 (884)
T 4aio_A 372 PDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMNNTASEHFMVDR 451 (884)
T ss_dssp SSTTHHHHHHHHHHHHHHHTTCEEEEEECCSBCSCCSSSSTTCCHHHHSTTTSBCBCTTSCBCCTTSSSBBCTTSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 65541579999999998746770024302555667785442326555676400114789885676775555889950444
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999478009998477844188999999999810101467789720899602787521236677765344678
Q 002787 563 LIIDDLLCWAVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLS 642 (881)
Q Consensus 563 liiDsl~~W~~eygIDGFRfDlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~ 642 (881)
+++|++++|+++|++||||||++..+.+..+......+..+..+...++...+++++|+|+.++......+....|.++.
T Consensus 452 ~~~d~~~~w~~~~~vDg~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~ 531 (884)
T 4aio_A 452 LIVDDLLNWAVNYKVDGFRFDLMGHIMKRTMMRAKSALQSLTTDAHGVDGSKIYLYGEGWDFAEVARNQRGINGSQLNMS 531 (884)
T ss_dssp HHHHHHHHHHHHSCCCEEEETTGGGSBHHHHHHHHHHHHTCCHHHHSSCGGGCEEEECCCCCGGGGGGTTSSBCCTTTTT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHCCCC
T ss_conf 44540133555405656774320045667777655531111310012222331000357765322333233320001577
Q ss_pred CCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
Q ss_conf 88402025688997627999999753232012345899999997679999999988778863101100100024678621
Q 002787 643 GTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKV 722 (881)
Q Consensus 643 gtgig~fnDr~Rdavrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~ 722 (881)
+..|+.|||++|+++++...+......+|..++...++++..+........+....+.+..++.+++.++.+....+...
T Consensus 532 ~~~i~e~nd~~r~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~ 611 (884)
T 4aio_A 532 GTGIGSFNDRIRDAINGGNPFGNPLQQGFNTGLFLEPNGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAK 611 (884)
T ss_dssp TSSCEEEEHHHHHHHHCSCTTSCTTCCCTTTTTTTSCCSSCCCCHHHHHHHHHHHHHHHHHHHBTCBSSCEEECTTSCEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHC
T ss_conf 64105442567765430255542010001013321101120366303232023211123303576645521025200000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCC-------------------------CCEEEEECCCCCCCC
Q ss_conf 2674332599985435898851786211565105544117-------------------------890158538422246
Q 002787 723 KGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSL-------------------------KGIPFFHCGDEILRS 777 (881)
Q Consensus 723 ~G~~~~~y~g~p~~ya~~P~~~INYVs~HDn~tL~D~l~~-------------------------kGiPfiy~GdE~lrS 777 (881)
.......+++.+.+++..|.+.+||++|||++|+++.+.. .|+||||||+|+||+
T Consensus 612 ~~~~~~~~~~~~~~~~~~p~~~~nfl~NHD~~r~~~~~~~~~~~~~~~~~r~~r~kla~alllt~pG~P~IY~GdEiG~t 691 (884)
T 4aio_A 612 KGSEIHTFDGLPVGYTASPIETINYVSAHDNETLFDVISVKTPMILSVDERCRINHLASSMMALSQGIPFFHAGDEILRS 691 (884)
T ss_dssp ETTTSBCTTSCBSCCBSSGGGEEECSCCSSSSCHHHHHHHHSCTTSCHHHHHHHHHHHHHHHHTSBSEEEEETTGGGTCC
T ss_pred CCHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf 11034541243101014750211333578887400223534565402999999999999999983898198736324766
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 89999999999986431377788998889998766788864446767999998512339999999999999781394333
Q 002787 778 KSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFR 857 (881)
Q Consensus 778 ks~drdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~~~~~~~~~k~Ll~lRksspalr 857 (881)
+.+++|+|++++|+|.+||.+..++|+.+.++...+...|..+.+....++++++..+..+++++||+||+|||++|+||
T Consensus 692 ~~~~~n~y~~~~~~~~~D~~R~p~~W~~~~~~g~~~~~~w~~~~~~~~~~~v~~q~~d~~sl~~~yr~Li~LRk~~paL~ 771 (884)
T 4aio_A 692 KSIDRDSYNSGDWFNKLDFTYETNNWGVGLPPSEKNEDNWPLMKPRLENPSFKPAKGHILAALDSFVDILKIRYSSPLFR 771 (884)
T ss_dssp CTTCSCGGGSHHHHHCCCTTCSCCSCSSCCCCHHHHGGGHHHHHHHHTCGGGSCCHHHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 88986543584110034646686776766676666776422355011341444311265789999999999986192531
Q ss_pred CCCHHHHHCCCCCCCCCCC
Q ss_conf 6887888602322246888
Q 002787 858 LRTANAIQVRRRHMSCLDC 876 (881)
Q Consensus 858 lgt~~~I~~~v~f~n~~~~ 876 (881)
+|++++|.++++|+++.+.
T Consensus 772 ~g~~~~i~~~~~~~~~~~~ 790 (884)
T 4aio_A 772 LSTANDIKQRVRFHNTGPS 790 (884)
T ss_dssp CCSHHHHHHHEEECSCSTT
T ss_pred CCCHHHHHHCCEEECCCCC
T ss_conf 6987787305254026865
No 3
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=1.00 E-value=1 Score=780.28 Aligned_cols=526 Identities=29% Similarity=0.508 Sum_probs=412.1
Q ss_pred CCCCHHHHCCCCCCCCCCCEEECCE--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECC-----CCC
Q ss_conf 4440000001489999952894992--69999969999089997408999997268841-469988999918-----999
Q 002787 194 LQLPGILDELFSYDGPLGALYAEET--VSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGP-----KSW 265 (881)
Q Consensus 194 vq~~~~lD~~y~~~~~LGa~~~~~~--vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~-----~~~ 265 (881)
.+..-++|++|+|+++|||++.+++ ++|+||||+|++|+|++|+......+...++| +..+|||++.++ +++
T Consensus 119 ~~~~~~~d~~~~y~g~lGa~~~~~g~~v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~G~~~~ 198 (877)
T 3faw_A 119 RQSWEFKDQLYAYSGNLGAVLNQDGSKVEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVWQTILDTKLGIKNY 198 (877)
T ss_dssp EECHHHHHHHHCCCSCCEEEECTTSSCEEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECTTSEEEEEECGGGTCSCC
T ss_pred ECCCEEEHHHCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCC
T ss_conf 10406502222778999777958998899999999999889999858987663036625568799899997877887667
Q ss_pred CCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCC----------CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9847999999613898632302404855212445----------898315860999998987433223589989999986
Q 002787 266 EGCYYVYEVSVYHPSALQIEKCYANDPYARGLSS----------DGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDI 335 (881)
Q Consensus 266 ~G~~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~----------ng~~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~ 335 (881)
.|.+|+|+|+... +..+++||||++++. .+.+|+|+|+.. +.|.+|... ..|...+++++
T Consensus 199 ~g~~Y~yrv~~~~------~~~~~~DPYA~~~~~~~~~~~~~~~~~~~s~vvd~~~--~~~~~~~~~--~~p~~~~~~~~ 268 (877)
T 3faw_A 199 TGYYYLYEIKRGK------DKVKILDPYAKSLAEWDSNTVNDDIKTAKAAFVNPSQ--LGPQNLSFA--KIANFKGRQDA 268 (877)
T ss_dssp TTCEEEEEEEETT------EEEEECCTTCSCBCCCBGGGCCSSCCSCCEECCCGGG--SSCTTCCCC--CCTTCCSGGGC
T ss_pred CCEEEEEEEEECC------CEEEECCCCCEECCCCCCCCCCCCCCCCCEEEECCCC--CCCCCCCCC--CCCCCCCCCCC
T ss_conf 8808999996689------6157238563112556843345544578659964301--587766545--67777886665
Q ss_pred EEEEEECCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39999804410269999999---775522100121013455889998798579937423468778533333335889873
Q 002787 336 SIYELHVRDFSVSDHTVHPD---FRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGL 412 (881)
Q Consensus 336 vIYElHVRdFs~~d~s~~~~---~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~ 412 (881)
||||+|||+|+. +++.+.. .+|+|.+++++ |+||++||||+||||||++++.++|.....
T Consensus 269 vIYElhvr~ft~-~~~~~~~~~~~~Gt~~gl~~~-------L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~--------- 331 (877)
T 3faw_A 269 VIYEAHVRDFTS-DQSLDGKLKNQLGTFAAFSEK-------LDYLQKLGVTHIQLLPVLSYFYVNEMDKSR--------- 331 (877)
T ss_dssp EEEEECTTGGGC-CGGGTTTCSSCTTSHHHHGGG-------HHHHHHHTCSEEEESCCBCBSSCBTTCCCC---------
T ss_pred EEEEEECHHHCC-CCCCCCCCCCCCCCHHHHHHH-------HHHHHHCCCCEEEECCHHCCCCCCCCCCCC---------
T ss_conf 899997647548-998775454788799999998-------999997499989985510034436222345---------
Q ss_pred CCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHH
Q ss_conf 11366778642000003766630256540299998679999874138999998887586888689999999998-21799
Q 002787 413 VFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGS-CRTIE 491 (881)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~-~ri~E 491 (881)
+..+.+ ....+||||+|.+|++|+++||++|..+ .|+.|
T Consensus 332 ---------------------------~~~~~~-------------~~~~ynwGY~~~~~~a~~~~yGt~p~~~~~~~~e 371 (877)
T 3faw_A 332 ---------------------------STAYTS-------------SDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAE 371 (877)
T ss_dssp ---------------------------CCSCCS-------------SSCSCCCSCSBSCSSSBCSTTCSCTTSTTHHHHH
T ss_pred ---------------------------CCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf ---------------------------455567-------------8887765767676656465446787776217899
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999651989999850134579999988886577789871323999950147787888778968999999999999
Q 002787 492 FRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCW 571 (881)
Q Consensus 492 fr~mV~alH~~GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~stc~~d~a~e~~mv~kliiDsl~~W 571 (881)
||+||++||++||+||||||||||+.. +.+.++.|+||++.+.+|.+....|+++++++|+||+++|+|++++|
T Consensus 372 fk~lV~~~H~~GI~VILDvV~NH~a~~------~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~W 445 (877)
T 3faw_A 372 LKQLIHDIHKRGMGVILDVVYNHTAKT------YLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYL 445 (877)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCCSCT------HHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999998759989999961354576------55356787302442799975215777655657989999999999999
Q ss_pred HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCEECC
Q ss_conf 994780099984778441889999999998101014677897208996027875212366777653446788-8402025
Q 002787 572 AVNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSG-TGIGSFN 650 (881)
Q Consensus 572 ~~eygIDGFRfDlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~g-tgig~fn 650 (881)
+++|||||||||+|+|++..+|..++.++++++| +++++||+|+.+..........+.|.++.. ..++.|+
T Consensus 446 v~e~gVDGFRfD~a~~~~~~~~~~~~~~~~~~~P--------~~~ligE~Wd~~~g~~~~~~~~~~~~~~~~~~~i~~f~ 517 (877)
T 3faw_A 446 TSEFKVDGFRFDMMGDHDAAAIELAYKEAKAINP--------NMIMIGEGWRTFQGDQGKPVKPADQDWMKSTDTVGVFS 517 (877)
T ss_dssp HHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHCT--------TCEEEECCCSCCCCBTTBCCCBSSGGGGGGCSSEEEEC
T ss_pred HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC--------CCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHH
T ss_conf 9970876899956776998999999998884488--------81899744455666443212366433442377520456
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 68899762799999975323201234589999999767999999998877886310110010002467862126743325
Q 002787 651 DRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTY 730 (881)
Q Consensus 651 Dr~Rdavrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y 730 (881)
|.+|++++|+..+. ...||++|.. +..... + .. +
T Consensus 518 d~iR~~~rg~~~~~--~~~gf~~g~~--------~~l~~~---~--------~~-----------------l-------- 551 (877)
T 3faw_A 518 DDIRNSLKSGFPNE--GTPAFITGGP--------QSLQGI---F--------KN-----------------I-------- 551 (877)
T ss_dssp HHHHHHHHCCTTCT--TCCCGGGTCC--------EEHHHH---H--------HH-----------------H--------
T ss_pred HHHHHHHCCCCCCC--CCHHHHCCCC--------HHHHHH---H--------HH-----------------H--------
T ss_conf 77999871665433--5302320770--------789999---9--------98-----------------6--------
Q ss_pred CCCCCCC-CCCCCCCEEEEECCCCCHHHHHHCCC---------------------------CEEEEECCCCCCCCCCCC-
Q ss_conf 9998543-58988517862115651055441178---------------------------901585384222468999-
Q 002787 731 DGTPVAY-ALCPTETISYVSAHDNETLFDVVSLK---------------------------GIPFFHCGDEILRSKSLD- 781 (881)
Q Consensus 731 ~g~p~~y-a~~P~~~INYVs~HDn~tL~D~l~~k---------------------------GiPfiy~GdE~lrSks~d- 781 (881)
.+++..| +..|..+||||+|||++||+|++.++ |+||||+|+|++||+.++
T Consensus 552 ~~~~~~~~~~~P~~sVnFV~nHD~~tl~Dlls~~~k~n~~~~~~~~~~r~~lA~alllls~GiP~i~~GdE~grs~~gnn 631 (877)
T 3faw_A 552 KAQPGNFEADSPGDVVQYIAAHDNLTLHDVIAKSINKDPKVAEEDIHRRLRLGNVMILTSQGTAFIHSGQEYGRTKRLLN 631 (877)
T ss_dssp TTCCSSSCCSSGGGEEECSCCSSSSCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTSSSEEEEETTTTTTCCCBCCC
T ss_pred HCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC
T ss_conf 44831124578642023421246414776622331478666779999999999999985688031446344406667875
Q ss_pred -----------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----------------------------999999998643137778899888999876678886444676799999851
Q 002787 782 -----------------------------RDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQ 832 (881)
Q Consensus 782 -----------------------------rdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~ 832 (881)
+|||+++||+|++||+...+++ .|+
T Consensus 632 n~Ycq~~~~D~~p~k~~~~d~p~~~~~f~~nsy~s~d~in~~DW~~~~~~~------------~~~-------------- 685 (877)
T 3faw_A 632 PDYMTKVSDDKLPNKATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNN------------KHP-------------- 685 (877)
T ss_dssp GGGSSCCCGGGCCTTEEECTTCSSSCEEESCCTTCCHHHHSCCHHHHHCTT------------TCH--------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------CCC--------------
T ss_conf 322344433344432111244333343345665776643223554222333------------444--------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 233999999999999978139433368878886023222468
Q 002787 833 KSHILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSCL 874 (881)
Q Consensus 833 ~~~~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~~ 874 (881)
....+++++++||+||+++|+||+++.++|.++|.|+++.
T Consensus 686 --~~~~l~~~~k~Li~lRk~~palr~~~~~~i~~~v~~~~~~ 725 (877)
T 3faw_A 686 --ISTKTQAYTAGLITLRRSTDAFRKLSKAEIDREVSLITEV 725 (877)
T ss_dssp --HHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHCEESSCT
T ss_pred --CCHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCEEEECCC
T ss_conf --3078999999999998659564277657626735997589
No 4
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=1.00 E-value=1 Score=770.14 Aligned_cols=520 Identities=35% Similarity=0.654 Sum_probs=421.6
Q ss_pred CCCCCCCHHHHC-CCCCCC-CCCCEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCCCCCC
Q ss_conf 445444000000-148999-995289499269999969999089997408999997268841-46998899991899998
Q 002787 191 ATGLQLPGILDE-LFSYDG-PLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPKSWEG 267 (881)
Q Consensus 191 ~t~vq~~~~lD~-~y~~~~-~LGa~~~~~~vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~~~~G 267 (881)
...|+..++||+ +|+|.+ +|||++.+++++|+||||+|++|+|++|+.+.+ .+...++| +...|+|++.+++...|
T Consensus 297 ~~~~~~~~~~d~~~~~y~g~~lGa~~~~~gv~F~vwaP~A~~V~l~lf~~~~~-~~~~~~~m~~~~~gvW~~~v~~~~~g 375 (921)
T 2wan_A 297 AHNILPRNVLNLPRYDYSGNDLGNVYSKDATSFRVWAPTASNVQLLLYNSEKG-SITKQLEMQKSDNGTWKLQVSGNLEN 375 (921)
T ss_dssp EEECEECGGGGSGGGCCCCSCCEEEECSSEEEEEEECTTCSEEEEEEESSSSS-CCSEEEECEECGGGEEEEEEESCCTT
T ss_pred CCCEEEHHHCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCC-CCCEEEECEECCCCEEEEEECCCCCC
T ss_conf 55146310125443566488850499799699999999998889999828988-75768958628998899998268899
Q ss_pred CEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 47999999613898632302404855212445898315860999998987433223589989999986399998044102
Q 002787 268 CYYVYEVSVYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSV 347 (881)
Q Consensus 268 ~~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~ng~~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~vIYElHVRdFs~ 347 (881)
.+|+|+|... + +...++||||+++..++.+|+++|+.. +.|.+|... ..|.+.+++++||||+|||+|+.
T Consensus 376 ~~Y~y~v~~~----g--~~~~~~DPya~~~~~~~~~s~v~d~~~--~~~~~W~~~--~~p~~~~~~~~vIYEihv~~F~~ 445 (921)
T 2wan_A 376 WYYLYQVTVN----G--TTQTAVDPYARAISVNATRGMIVDLKA--TDPAGWQGD--HEQTPANPVDEVIYEAHVRDFSI 445 (921)
T ss_dssp CEEEEEEECS----S--CEEEECCTTCSSBSGGGSSEECCCGGG--GSCTTGGGC--CCCCCSSGGGCCEEEECHHHHHC
T ss_pred CEEEEEEEEC----C--EEEEECCCCCEEECCCCCCEEEECCCC--CCCCCCCCC--CCCCCCCCHHCEEEEEECCCCCC
T ss_conf 8899999949----9--679955875201025898569975632--685323224--58888981134899997381007
Q ss_pred CCCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69999999775522100121----01345588999879857993742346877853333333588987311366778642
Q 002787 348 SDHTVHPDFRGGYLAFTLQN----SAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSW 423 (881)
Q Consensus 348 ~d~s~~~~~rG~y~gftek~----s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (881)
.+.+. ...+|+|+|++++. .+++++|+||++||||||||||||++++++|..
T Consensus 446 ~~~~g-~~~~Gt~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~e~~~~de~~----------------------- 501 (921)
T 2wan_A 446 DANSG-MKNKGKYLAFTEHGTKGPDHVKTGIDSLKELGITTVQLQPVEEFNSIDETQ----------------------- 501 (921)
T ss_dssp STTSC-CSSTTSGGGGGCCSCBCGGGCBCHHHHHHHHTCCEEEESCCEEESSSCTTS-----------------------
T ss_pred CCCCC-CCCCCCEEHEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCC-----------------------
T ss_conf 99999-788887101113465553231013379997699889969852067655346-----------------------
Q ss_pred CEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 00000376663025654029999867999987413899999888758688868999999999821799999999996519
Q 002787 424 WIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIG 503 (881)
Q Consensus 424 ~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~~ri~Efr~mV~alH~~G 503 (881)
.+.+||||||.+|++|+++|+++|.|..|+.|||+||++||++|
T Consensus 502 ------------------------------------~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~G 545 (921)
T 2wan_A 502 ------------------------------------PDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQR 545 (921)
T ss_dssp ------------------------------------TTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTT
T ss_pred ------------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf ------------------------------------67677689876778877322448888854999999999998769
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 89999850134579999988886577789871323999950147-78788877896899999999999999478009998
Q 002787 504 LHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHS-TCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRF 582 (881)
Q Consensus 504 irVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~s-tc~~d~a~e~~mv~kliiDsl~~W~~eygIDGFRf 582 (881)
|+||||||||||+..+. +.|++.+|.||++.+++|.+.+. .|++++|++|+||+++|+|++++|+++||||||||
T Consensus 546 I~VILDvV~NHt~~~~~----~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVDGfR~ 621 (921)
T 2wan_A 546 IGVNMDVVYNHTFDVMV----SDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRF 621 (921)
T ss_dssp CEEEEEECTTCCSCSSS----SHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEEECCCCCCCCCC----CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98999985665566443----11027788737875899863478875662143899999999999999999829887995
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHCCCCC
Q ss_conf 47784418899999999981010146778972089960278752123667776534467888402025688997627999
Q 002787 583 DLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSP 662 (881)
Q Consensus 583 Dlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~gtgig~fnDr~Rdavrgg~~ 662 (881)
|+|+++++++|.++++++++++ |+++++||.|+.+...- .....+.+.+..+.+++.|||++|+++++ ..
T Consensus 622 Da~~~~~~~~~~~~~~~l~~~~--------p~~~ligE~w~~~~~~~-~~~~~~~~~~~~gf~~~~~nd~~rd~~~~-~~ 691 (921)
T 2wan_A 622 DLMALLGKDTMAKISNELHAIN--------PGIVLYGEPWTGGTSGL-SSDQLVTKGQQKGLGIGVFNDNIRNGLDG-NV 691 (921)
T ss_dssp TTGGGGCHHHHHHHHHHHHHHC--------TTCEEEECSSCSSCCSS-CTTTSCCTTTTTTTTCEEECHHHHHHHHC-CT
T ss_pred CCCCCCCHHHHHHHHHHHHHHC--------CCEEEEEECCCCCCCCC-CCCHHCCCCCCCCCCEEEECHHHHHHHHC-CC
T ss_conf 0544368999999999999769--------96389984236777543-21000022556799838856089998742-03
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99975323201234589999999767999999998877886310110010002467862126743325999854358988
Q 002787 663 FGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPT 742 (881)
Q Consensus 663 F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~g~p~~ya~~P~ 742 (881)
|.. ..+||..|.. +.. +.++.++.+. ...|...|.
T Consensus 692 f~~-~~~~f~~g~~--------~~~-----------~~l~~~l~~~-------------------------~~~~~~~p~ 726 (921)
T 2wan_A 692 FDK-TAQGFATGDP--------NQV-----------DVIKNGVIGS-------------------------IQDFTSAPS 726 (921)
T ss_dssp TCT-TCCCTTTTCS--------SCH-----------HHHHHHHBTT-------------------------TTTTCSSGG
T ss_pred CCC-CCHHHHCCCH--------HHH-----------HHHHHHHHCC-------------------------HHHCCCCCC
T ss_conf 444-4404450783--------279-----------9999988506-------------------------112055844
Q ss_pred CCEEEEECCCCCHHHHHHCC--------------C----------CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 51786211565105544117--------------8----------90158538422246899999999999864313777
Q 002787 743 ETISYVSAHDNETLFDVVSL--------------K----------GIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSY 798 (881)
Q Consensus 743 ~~INYVs~HDn~tL~D~l~~--------------k----------GiPfiy~GdE~lrSks~drdsY~sgDw~N~~dw~~ 798 (881)
.++||++|||+.||++.+.+ + |+||||||+|+++++.+++|+|+++|++|+++|..
T Consensus 727 ~~vnfv~nHD~~rl~d~l~~~~~~~~~~~~~~~~rla~a~llt~pG~P~iy~GdE~g~~~~g~~n~y~~~d~~~~~~W~~ 806 (921)
T 2wan_A 727 ETINYVTSHDNMTLWDKILASNPSDTEADRIKMDELAHAVVFTSQGVPFMQGGEEMLRTKGGNDNSYNAGDSVNQFDWSR 806 (921)
T ss_dssp GEEECSCCSSSCCHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHSBSEEEEETTGGGTCCCTTCSCCTTCCHHHHSCCTHH
T ss_pred EEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 06886303677527777664378988999999999999999877998589855200456789876657865444357765
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 8899888999876678886444676799999851233999999999999978139433368878886023222468
Q 002787 799 NSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSCL 874 (881)
Q Consensus 799 ~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~~ 874 (881)
. .+...+++++|+||+||+++|+|+.++..+|..++.|++..
T Consensus 807 ~----------------------------------~~~~~l~~~~~~Li~lRk~~paL~~g~~~~i~~~~~~~~~~ 848 (921)
T 2wan_A 807 K----------------------------------AQFKDVFDYFSSMIHLRNQHPAFRMTTADQIKQNLTFLESP 848 (921)
T ss_dssp H----------------------------------HHTHHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEECCCC
T ss_pred C----------------------------------CCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCEEEECCC
T ss_conf 3----------------------------------22259999999999998639665078544415616996289
No 5
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=1.00 E-value=1 Score=755.10 Aligned_cols=521 Identities=31% Similarity=0.534 Sum_probs=393.7
Q ss_pred HHHCCCCCCCCCCCEEECC--EEEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCC-------CCCCC
Q ss_conf 0000148999995289499--269999969999089997408999997268841-4699889999189-------99984
Q 002787 199 ILDELFSYDGPLGALYAEE--TVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPK-------SWEGC 268 (881)
Q Consensus 199 ~lD~~y~~~~~LGa~~~~~--~vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~-------~~~G~ 268 (881)
++|++|+|+++|||++.++ +++|+||||+|++|+|++|+......+...++| +..+|+|++.+++ ++.|.
T Consensus 311 ~~d~~~~y~~~lGa~~~~~g~gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~G~ 390 (1014)
T 2ya1_A 311 LKDETYSYDGKLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGY 390 (1014)
T ss_dssp HHHHHHCCCSCCEEEEEGGGTEEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSCCSCCTTC
T ss_pred ECCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 03211367898555796899789999999999989999987898776524773624889889999756456885445786
Q ss_pred EEEEEEEEECCCCCCCCEEEECCCCCCCCCCC-C-----------CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 79999996138986323024048552124458-9-----------83158609999989874332235899899999863
Q 002787 269 YYVYEVSVYHPSALQIEKCYANDPYARGLSSD-G-----------RRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDIS 336 (881)
Q Consensus 269 ~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~n-g-----------~~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~v 336 (881)
+|+|+|+.. .+..+++||||++++.. + .++.++|+....+....|. ..|...+++++|
T Consensus 391 ~Y~y~i~~~------~~~~~~~DPYa~~~~~~~~~~~~~~~~~~~~~s~vvd~~~~~~~~~~~~----~~~~~~~~~~~v 460 (1014)
T 2ya1_A 391 YYQYQIERQ------GKTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYG----KIHNFKTREDAV 460 (1014)
T ss_dssp EEEEEEEET------TEEEEECCTTCSSBCCCBGGGTTSCGGGSSCCEECCCGGGSSCTTCCCC----CCTTCSSGGGCC
T ss_pred EEEEEEEEC------CEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCC----CCCCCCCCCCCE
T ss_conf 789999809------8079963855042145553223566667764289977221387654223----476666755557
Q ss_pred EEEEECCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999804410269999999---7755221001210134558899987985799374234687785333333358898731
Q 002787 337 IYELHVRDFSVSDHTVHPD---FRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLV 413 (881)
Q Consensus 337 IYElHVRdFs~~d~s~~~~---~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~~ 413 (881)
|||+|||+|+. +++++.. .+|+|.|++++ |+||++|||||||||||+++++++|......
T Consensus 461 IYE~hv~~ft~-~~~~~~~~~~~~Gt~~gl~~~-------LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~--------- 523 (1014)
T 2ya1_A 461 IYEAHVRDFTS-DPAIAKDLTKPFGTFEAFIEK-------LDYLKDLGVTHIQLLPVLSYYFVNELKNHER--------- 523 (1014)
T ss_dssp EEEECHHHHHC-CGGGTTTCSSCTTSHHHHHTT-------HHHHHHHTCSEEEESCCBCBSSCBGGGTTSC---------
T ss_pred EEEEECCCCCC-CCCCCCCCCCCCCCHHHHHHH-------HHHHHHCCCCEEEECCCCCCCCCCCCCCCCC---------
T ss_conf 99995687778-987663234778599999987-------6899976998499437220455562112222---------
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHH
Q ss_conf 1366778642000003766630256540299998679999874138999998887586888689999999998-217999
Q 002787 414 FFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGS-CRTIEF 492 (881)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~-~ri~Ef 492 (881)
+..+.. ....+||||+|.+||+|+++||++|..+ .++.||
T Consensus 524 --------------------------~~~y~~-------------~~~~ynwGY~~~~y~a~~~~ygt~p~~~~~~~~ef 564 (1014)
T 2ya1_A 524 --------------------------LSDYAS-------------SNSNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEF 564 (1014)
T ss_dssp --------------------------CCSCCS-------------SSCSCCCSCSBSCSSSBCSTTCSCTTCTTHHHHHH
T ss_pred --------------------------CCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf --------------------------232345-------------76776667776767566621047876666549999
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999996519899998501345799999888865777898713239999501477878887789689999999999999
Q 002787 493 RRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWA 572 (881)
Q Consensus 493 r~mV~alH~~GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~stc~~d~a~e~~mv~kliiDsl~~W~ 572 (881)
|+||++||++||+||||||||||+.. +.++++.|.||++.+.+|......|+++++++|+||+++|+|++++|+
T Consensus 565 k~lV~~~H~~GI~VIlDvV~NHt~~~------~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~ 638 (1014)
T 2ya1_A 565 KNLINEIHKRGMGAILDVVYNHTAKV------DLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLV 638 (1014)
T ss_dssp HHHHHHHHTTTCEEEEEECTTCCSCH------HHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCC------CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999998769999999712545663------012568887158707999865577888767689999999999999999
Q ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCEECCH
Q ss_conf 94780099984778441889999999998101014677897208996027875212366777653446788-84020256
Q 002787 573 VNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSG-TGIGSFND 651 (881)
Q Consensus 573 ~eygIDGFRfDlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~g-tgig~fnD 651 (881)
++|||||||||+|++++.++|.+++.++++++| +++++||+|+............+.+..|.. ..++.|+|
T Consensus 639 ~e~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p--------~~~ligE~W~~~~g~~~~~~~~~~~~w~~~~~~~~~f~d 710 (1014)
T 2ya1_A 639 DTYKVDGFRFDMMGDHDAASIEEAYKAARALNP--------NLIMLGEGWRTYAGDENMPTKAADQDWMKHTDTVAVFSD 710 (1014)
T ss_dssp HHHCCCEEEETTGGGSBHHHHHHHHHHHHHHCT--------TCEEEECCCSCCCCSTTCCCCBSSGGGGGGCSSSEEECH
T ss_pred HHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--------CEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHH
T ss_conf 853940999968788798999999999997499--------769998542555676543124454004544995241317
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 88997627999999753232012345899999997679999999988778863101100100024678621267433259
Q 002787 652 RIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYD 731 (881)
Q Consensus 652 r~Rdavrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~ 731 (881)
.+|++++++..+. ...+|.+|.. ..... + .. .+.
T Consensus 711 ~~r~~l~~~~~~~--~~~~~~~g~~--------~~~~~-----------l----~~---------------------~l~ 744 (1014)
T 2ya1_A 711 DIRNNLKSGYPNE--GQPAFITGGK--------RDVNT-----------I----FK---------------------NLI 744 (1014)
T ss_dssp HHHHHHSCCTTST--TCCCTTTTCC--------EEHHH-----------H----HH---------------------HHT
T ss_pred HHHHHHHCCCCCC--CCHHHHCCCC--------CCHHH-----------H----HH---------------------HHH
T ss_conf 9999986026644--5312221675--------32999-----------9----99---------------------875
Q ss_pred CCCCCC-CCCCCCCEEEEECCCCCHHHHHHCC-----------------------------CCEEEEECCCCCCCCCCCC
Q ss_conf 998543-5898851786211565105544117-----------------------------8901585384222468999
Q 002787 732 GTPVAY-ALCPTETISYVSAHDNETLFDVVSL-----------------------------KGIPFFHCGDEILRSKSLD 781 (881)
Q Consensus 732 g~p~~y-a~~P~~~INYVs~HDn~tL~D~l~~-----------------------------kGiPfiy~GdE~lrSks~d 781 (881)
+++..| +..|.++||||+|||++||+|.+.+ .|+||||||+|++|++.++
T Consensus 745 ~~~~~~~~~~p~~~vnfv~nHD~~~l~d~v~~~~~~~~~~~~~~~~~~~~~rla~~lll~spGiP~i~~GdE~g~t~~~~ 824 (1014)
T 2ya1_A 745 AQPTNFEADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENYAEIHRRLRLGNLMVLTAQGTPFIHSGQEYGRTKQFR 824 (1014)
T ss_dssp TCCSSSCCSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHTSSSEEEEETTTTTTCCCBCC
T ss_pred CCCCCCCCCCHHHHEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCC
T ss_conf 28433356780350574203788764100032035784320004789999999999998689984898235434667888
Q ss_pred ----------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ----------------------------------9999999986431377788998889998766788864446767999
Q 002787 782 ----------------------------------RDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADP 827 (881)
Q Consensus 782 ----------------------------------rdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~ 827 (881)
+|+|+++|++|+++|+...+ +..+
T Consensus 825 d~~~r~~~~~g~~~e~~~~~~~~~g~~f~~~~~~~dsy~~~~~~n~ldW~~~~~------------~~~~---------- 882 (1014)
T 2ya1_A 825 NPAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATD------------GKAY---------- 882 (1014)
T ss_dssp CGGGSSCCCTTTCCTTEEEEECTTSCEEEEEEEESCCTTCCHHHHCCCHHHHHC------------TTTC----------
T ss_pred CHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------CCCC----------
T ss_conf 725654221133310111101023553234333456789976512357863334------------3345----------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 9985123399999999999997813943336887888602322246
Q 002787 828 SFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSC 873 (881)
Q Consensus 828 ~~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~ 873 (881)
....++++++|+||+|||++|+||+++...|..++.|++.
T Consensus 883 ------~~~~~l~~f~r~Li~LRk~~pal~~g~~~~~~~~~~~~~~ 922 (1014)
T 2ya1_A 883 ------PENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVHLITV 922 (1014)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHEEESSC
T ss_pred ------CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECC
T ss_conf ------0149999999999999851931248862331574599757
No 6
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=1.00 E-value=1 Score=726.20 Aligned_cols=521 Identities=31% Similarity=0.537 Sum_probs=391.8
Q ss_pred HHHCCCCCCCCCCCEEECCE--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCC-------CCCCC
Q ss_conf 00001489999952894992--69999969999089997408999997268841-4699889999189-------99984
Q 002787 199 ILDELFSYDGPLGALYAEET--VSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPK-------SWEGC 268 (881)
Q Consensus 199 ~lD~~y~~~~~LGa~~~~~~--vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~-------~~~G~ 268 (881)
.||++|+|+++|||++.+++ ++|+||||+|++|+|++|+......+...++| +..+|+|++.+++ ++.|.
T Consensus 4 ~~d~~~~y~~~lGa~~~~~g~gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~g~ 83 (714)
T 2ya0_A 4 LKDETYSYDGKLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGY 83 (714)
T ss_dssp HHHHHHCCCSCCEEEEETTTTEEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSSCSCCTTC
T ss_pred CCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 13421247999887796899879999989989989999874798776515885704879889999777567885446883
Q ss_pred EEEEEEEEECCCCCCCCEEEECCCCCCCCCCC-C-----------CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 79999996138986323024048552124458-9-----------83158609999989874332235899899999863
Q 002787 269 YYVYEVSVYHPSALQIEKCYANDPYARGLSSD-G-----------RRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDIS 336 (881)
Q Consensus 269 ~Y~y~V~v~~p~~g~~e~~~vtDPYA~~ls~n-g-----------~~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~v 336 (881)
+|+|+|+... +..+++||||++++.. + .+++|+|+....+....|. ..|...+++++|
T Consensus 84 ~Y~y~v~~~~------~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~vvd~~~~~~~~~~~~----~~~~~~~~~~~v 153 (714)
T 2ya0_A 84 YYQYQIERQG------KTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYG----KIHNFKTREDAV 153 (714)
T ss_dssp EEEEEEEETT------EEEEECCTTCSEECCCBGGGTTSCGGGSSCCEECCCGGGSSCTTCCCC----CCTTCSSGGGCC
T ss_pred EEEEEEEECC------CEEEECCCCEEEECCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC----CCCCCCCCCCCE
T ss_conf 8999997089------438854876133236760002567656677679976511486543101----367777855568
Q ss_pred EEEEECCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999804410269999999---7755221001210134558899987985799374234687785333333358898731
Q 002787 337 IYELHVRDFSVSDHTVHPD---FRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLV 413 (881)
Q Consensus 337 IYElHVRdFs~~d~s~~~~---~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~~ 413 (881)
|||+|||+|+. +++.+.. .+|+|+|++++ |+||++|||||||||||+++++++|......
T Consensus 154 iYE~hv~~f~~-~~~~~~~~~~~~Gt~~gi~~~-------L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~--------- 216 (714)
T 2ya0_A 154 IYEAHVRDFTS-DPAIAKDLTKPFGTFEAFIEK-------LDYLKDLGVTHIQLLPVLSYYFVNELKNHER--------- 216 (714)
T ss_dssp EEEECHHHHHC-CGGGTTTCSSCTTSHHHHHTT-------HHHHHHHTCSEEEESCCBCBSSCBGGGTTSC---------
T ss_pred EEEEEEHHHCC-CCCCCCCCCCCCCCHHHHHHH-------HHHHHHCCCCEEEECCCCCCCCCCCCCCCCC---------
T ss_conf 99997055236-988753234677689999987-------6899976998799788401555672101111---------
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHH
Q ss_conf 1366778642000003766630256540299998679999874138999998887586888689999999998-217999
Q 002787 414 FFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGS-CRTIEF 492 (881)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~-~ri~Ef 492 (881)
+..+.. ....+||||+|.+|++|+++||++|..+ .++.||
T Consensus 217 --------------------------~~~~~~-------------~~~~~~wGY~~~~~~a~~~~yg~~~~~~~~~~~ef 257 (714)
T 2ya0_A 217 --------------------------LSDYAS-------------SNSNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEF 257 (714)
T ss_dssp --------------------------CCSCCS-------------SSCSCCCSCSBSCSSSBCSTTSSCTTSTTHHHHHH
T ss_pred --------------------------CCCCCC-------------CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH
T ss_conf --------------------------222356-------------76767667777667566732236887765569999
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999996519899998501345799999888865777898713239999501477878887789689999999999999
Q 002787 493 RRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHSTCMNNTASEHYMVERLIIDDLLCWA 572 (881)
Q Consensus 493 r~mV~alH~~GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~stc~~d~a~e~~mv~kliiDsl~~W~ 572 (881)
|+||++||++||+||||||||||+.. +.+.++.|.||++.+.+|......|+++++++|++|+++|+|++++|+
T Consensus 258 k~lV~~~H~~Gi~VilDvV~NH~~~~------~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~ 331 (714)
T 2ya0_A 258 KNLINEIHKRGMGAILDVVYNHTAKV------DLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLV 331 (714)
T ss_dssp HHHHHHHHHTTCEEEEEECTTBCSCH------HHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCC------CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999879999999625744576------432246887147858999870466888756589999999999999999
Q ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCEECCH
Q ss_conf 94780099984778441889999999998101014677897208996027875212366777653446788-84020256
Q 002787 573 VNYKVDGFRFDLMGHIMKSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSG-TGIGSFND 651 (881)
Q Consensus 573 ~eygIDGFRfDlm~h~~~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~g-tgig~fnD 651 (881)
++|||||||||+|++++.++|.+++.++++++ |+++++||+|+............+.+..+.+ ..++.|+|
T Consensus 332 ~e~~vDGfR~D~~~~~~~~~~~~~~~~~~~~~--------p~~~ligE~w~~~~g~~~~~~~~~~~~~~~~~~~~~~f~d 403 (714)
T 2ya0_A 332 DTYKVDGFRFDMMGDHDAASIEEAYKAARALN--------PNLIMLGEGWRTYAGDENMPTKAADQDWMKHTDTVAVFSD 403 (714)
T ss_dssp HHHCCCEEEETTGGGSBHHHHHHHHHHHHHHC--------TTCEEEECCCSCCCCSTTCCCCBSSGGGGGGCSSSEEECH
T ss_pred HHHCCEEEEEECCCCCCHHHHHHHHHHHHHHC--------CCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf 86193199996878878899999999999869--------9849993254344675422245540548865997553065
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 88997627999999753232012345899999997679999999988778863101100100024678621267433259
Q 002787 652 RIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYD 731 (881)
Q Consensus 652 r~Rdavrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~ 731 (881)
.+|++++++..+. ...+|.+|.. +.... +...+ .
T Consensus 404 ~~r~~~~~~~~~~--~~~~~~~g~~--------~~~~~-----------l~~~l-------------------------~ 437 (714)
T 2ya0_A 404 DIRNNLKSGYPNE--GQPAFITGGK--------RDVNT-----------IFKNL-------------------------I 437 (714)
T ss_dssp HHHHHHHCCSSST--TCCCTTTTCC--------EEHHH-----------HHHHH-------------------------T
T ss_pred HHHHHHHCCCCCC--CCHHHHCCCC--------CCHHH-----------HHHHH-------------------------H
T ss_conf 8999984657754--5411211776--------52999-----------99877-------------------------4
Q ss_pred CCCCCC-CCCCCCCEEEEECCCCCHHHHHHCC-----------------------------CCEEEEECCCCCCCCCCCC
Q ss_conf 998543-5898851786211565105544117-----------------------------8901585384222468999
Q 002787 732 GTPVAY-ALCPTETISYVSAHDNETLFDVVSL-----------------------------KGIPFFHCGDEILRSKSLD 781 (881)
Q Consensus 732 g~p~~y-a~~P~~~INYVs~HDn~tL~D~l~~-----------------------------kGiPfiy~GdE~lrSks~d 781 (881)
+++..| ...|.++||||+|||+.||+|.+.+ .|+||||||+|+++++.++
T Consensus 438 ~~~~~~~~~~p~~~vnfv~nHD~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~la~~lll~~~G~P~i~~GdE~g~~~~~~ 517 (714)
T 2ya0_A 438 AQPTNFEADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENYAEIHRRLRLGNLMVLTAQGTPFIHSGQEYGRTKQFR 517 (714)
T ss_dssp TCCTTSCCSSGGGEEECSCCSSSSCHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHSSSEEEEETTTTTTCCCBCC
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCC
T ss_conf 48655677898897549874798614444444314685431013999999999999999779984798044432457888
Q ss_pred ----------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ----------------------------------9999999986431377788998889998766788864446767999
Q 002787 782 ----------------------------------RDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADP 827 (881)
Q Consensus 782 ----------------------------------rdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~ 827 (881)
+|+|++++++|.++|+...+ +..+
T Consensus 518 d~~~~~~~~~gr~~e~~~~~~~~~g~~f~~p~~~~d~~~~~~~~~~ldW~~~~~------------~~~~---------- 575 (714)
T 2ya0_A 518 NPAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATD------------GKAY---------- 575 (714)
T ss_dssp CGGGSSCCCGGGCCTTEEEEECTTCCEEEEEEEESCCTTCCHHHHCCCHHHHHC------------TTTC----------
T ss_pred CCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC------------CCCC----------
T ss_conf 701320122234421112222113554334332346667887520103774223------------3434----------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 9985123399999999999997813943336887888602322246
Q 002787 828 SFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSC 873 (881)
Q Consensus 828 ~~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~ 873 (881)
.+...++++||+||+|||++|+||.|+...|..+|.|++.
T Consensus 576 ------~~~~~l~~~~~~Li~lRk~~p~l~~g~~~~~~~~~~~~~~ 615 (714)
T 2ya0_A 576 ------PENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVHLITV 615 (714)
T ss_dssp ------HHHHHHHHHHHHHHHHHHTCGGGGCSSHHHHHHHEEESSC
T ss_pred ------CCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCEEEECC
T ss_conf ------1148999999999999851902137752441675699788
No 7
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=1.00 E-value=1 Score=725.59 Aligned_cols=511 Identities=33% Similarity=0.587 Sum_probs=406.2
Q ss_pred CHHHHCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCCCCCCCEEEEEEE
Q ss_conf 000000148999995289499269999969999089997408999997268841-4699889999189999847999999
Q 002787 197 PGILDELFSYDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPKSWEGCYYVYEVS 275 (881)
Q Consensus 197 ~~~lD~~y~~~~~LGa~~~~~~vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~~~~G~~Y~y~V~ 275 (881)
..+||++|+|+++|||++.+++++|+||||+|++|.|++|... .+...++| +..+|+|++.+++...|.+|+|+|.
T Consensus 93 ~~~~d~~~~y~~~lGa~~~~~~~~f~vwap~a~~V~l~~~~~~---~~~~~~~m~~~~~g~w~~~v~~~~~g~~Y~f~v~ 169 (718)
T 2e8y_A 93 TAAFDDEFYYDGELGAVYTADHTVFKVWAPAATSAAVKLSHPN---KSGRTFQMTRLEKGVYAVTVTGDLHGYEYLFCIC 169 (718)
T ss_dssp SHHHHHHHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEECTT---SCCEEEECEECGGGEEEEEEESCCTTCEEEEEEE
T ss_pred CCCCHHHCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEECCC---CCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEE
T ss_conf 4100222155789997886894899999999989999999089---8555885834999989999788999971899999
Q ss_pred EECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 61389863230240485521244589831586099999898743322358998999998639999804410269999999
Q 002787 276 VYHPSALQIEKCYANDPYARGLSSDGRRTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPD 355 (881)
Q Consensus 276 v~~p~~g~~e~~~vtDPYA~~ls~ng~~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~vIYElHVRdFs~~d~s~~~~ 355 (881)
.. + +..+++||||+++..++.+|+++|++. ..|.+| . |...+++++||||+|||+|+.++.+. ..
T Consensus 170 ~~----g--~~~~~~DPya~~~~~~~~~s~v~d~~~--~~~~~w-~-----~~~~~~~~~viYei~v~~F~~~~~~g-~~ 234 (718)
T 2e8y_A 170 NN----S--EWMETVDQYAKAVTVNGEKGVVLRPDQ--MKWTAP-L-----KPFSHPVDAVIYETHLRDFSIHENSG-MI 234 (718)
T ss_dssp ET----T--EEEEECCTTCSSBCGGGCSEECCCCCC--CCCCCC-C-----CCCSCGGGCCEEEECHHHHHHSTTSC-CS
T ss_pred EC----C--EEEEECCCCCCCCCCCCCCCEEECCCC--CCCCCC-C-----CCCCCHHHCEEEEEEHHHHCCCCCCC-CC
T ss_conf 69----9--578854876251145898446976311--587566-7-----77788035689998557854799889-78
Q ss_pred CCCCCCCCCCCC----HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 775522100121----0134558899987985799374234687785333333358898731136677864200000376
Q 002787 356 FRGGYLAFTLQN----SAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGI 431 (881)
Q Consensus 356 ~rG~y~gftek~----s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (881)
.+|+|.|++++. .+++++|+||++||||||||||||++++++|...
T Consensus 235 ~~G~~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~------------------------------ 284 (718)
T 2e8y_A 235 NKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKP------------------------------ 284 (718)
T ss_dssp STTSGGGGGCTTCBCTTSCBCHHHHHHHHTCSEEEESCCEEESSSCTTSG------------------------------
T ss_pred CCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC------------------------------
T ss_conf 89871000003656543402354899976988899787222676444566------------------------------
Q ss_pred CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 6630256540299998679999874138999998887586888689999999998-217999999999965198999985
Q 002787 432 KSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGS-CRTIEFRRMVQALNHIGLHVVLDV 510 (881)
Q Consensus 432 ~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~-~ri~Efr~mV~alH~~GirVIlDV 510 (881)
...+||||||.+|++|+++||++|..+ .+++|||+||++||++||+|||||
T Consensus 285 ----------------------------~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIlDv 336 (718)
T 2e8y_A 285 ----------------------------LDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDV 336 (718)
T ss_dssp ----------------------------GGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf ----------------------------5667678786678774842356877765449999999999998799999999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 0134579999988886577789871323999950147-787888778968999999999999994780099984778441
Q 002787 511 VYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHS-TCMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIM 589 (881)
Q Consensus 511 VyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~s-tc~~d~a~e~~mv~kliiDsl~~W~~eygIDGFRfDlm~h~~ 589 (881)
|||||+..+. +.+++..|.||++.+++|.+.+. .|++++|++|++|+++|+|++++|+++|||||||||+|++++
T Consensus 337 V~NHt~~~~~----~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVDGfR~D~~~~~~ 412 (718)
T 2e8y_A 337 VFNHVYKREN----SPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGILD 412 (718)
T ss_dssp CTTCCSSGGG----SHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSB
T ss_pred ECCCCCCCCC----CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 5266567664----320155887078618998634788756643659999999999999999998199999995634389
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCCCCCC-CCCEECCHHHHHHHCCCCCCCCCC
Q ss_conf 88999999999810101467789720899602787521-2366777653446788-840202568899762799999975
Q 002787 590 KSTMMKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEV-AKNGRGVNASQFNLSG-TGIGSFNDRIRDAMLGGSPFGPPL 667 (881)
Q Consensus 590 ~~~~~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev-~~~~~~~~a~q~nl~g-tgig~fnDr~Rdavrgg~~F~~~~ 667 (881)
+++|++++++++++. ++++++||.|+.+.. ....+. .+.+..+ ..++.||+.+|+++++ ..|.. .
T Consensus 413 ~~~~~~~~~~~~~~~--------p~~~ligE~w~~~~~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~~~~-~~f~~-~ 479 (718)
T 2e8y_A 413 IDTVLYMKEKATKAK--------PGILLFGEGWDLATPLPHEQKA---ALANAPRMPGIGFFNDMFRDAVKG-NTFHL-K 479 (718)
T ss_dssp HHHHHHHHHHHHHHS--------TTCEEEECCCCCCCSSCGGGBC---CGGGGGGCTTCEEECHHHHHHHHC-CSSST-T
T ss_pred HHHHHHHHHHHHHHC--------CCEEEEEEECCCCCCCCCCCCC---CCCCCCCCCCEEEECHHHHHHHHC-CCCCC-C
T ss_conf 999999999998758--------9849998644777765432101---324556898258977088887633-23554-5
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 32320123458999999976799999999887788631011001000246786212674332599985435898851786
Q 002787 668 QQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISY 747 (881)
Q Consensus 668 ~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~g~p~~ya~~P~~~INY 747 (881)
.+||..|. .. ....++..+.+.+ +|.+. .++...|...+||
T Consensus 480 ~~~f~~g~-----------~~--------~~~~l~~~l~~~~-------------------~~~~~-~~~~~~~~~~vnf 520 (718)
T 2e8y_A 480 ATGFALGN-----------GE--------SAQAVMHGIAGSS-------------------GWKAL-APIVPEPSQSINY 520 (718)
T ss_dssp CCCGGGTC-----------GG--------GHHHHHHHHBTTS-------------------CBTTB-CCSSSSGGGEEEC
T ss_pred CCCEECCC-----------HH--------HHHHHHHHHHCCC-------------------CCCCC-CCCCCCCCCEEEE
T ss_conf 56302587-----------31--------6999999975573-------------------32445-5345894047898
Q ss_pred EECCCCCHHHHHHCC------------------------CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 211565105544117------------------------89015853842224689999999999986431377788998
Q 002787 748 VSAHDNETLFDVVSL------------------------KGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNW 803 (881)
Q Consensus 748 Vs~HDn~tL~D~l~~------------------------kGiPfiy~GdE~lrSks~drdsY~sgDw~N~~dw~~~~nn~ 803 (881)
++|||+.|+++.+.+ .|+||||||+|+|+++.++.++|+.+|.+|+++|+..
T Consensus 521 v~nHD~~rl~~~~~~~~~~~~~~~~~~~~kla~a~ll~~~G~P~iy~GdE~g~~~~g~~~~y~~~d~~~~~~W~~~---- 596 (718)
T 2e8y_A 521 VESHDNHTFWDKMSFALPQENDSRKRSRQRLAVAIILLAQGVPFIHSGQEFFRTKQGVENSYQSSDSINQLDWDRR---- 596 (718)
T ss_dssp SCCSSSSCHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTSBSEEEEETTGGGTCCCTTCSCCTTCCHHHHSCCHHHH----
T ss_pred EECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCC----
T ss_conf 8448886077663015888788999999999999998778972776013117567898766589765464683313----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 8899987667888644467679999985123399999999999997813943336887888602322246
Q 002787 804 GVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANAIQVRRRHMSC 873 (881)
Q Consensus 804 ~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~~I~~~v~f~n~ 873 (881)
.+..++++++|+||+|||++|+|+.|+.+.|..++.|.+.
T Consensus 597 ------------------------------~~~~~l~~~~~~Li~lRk~~pal~~g~~~~i~~~~~~~~~ 636 (718)
T 2e8y_A 597 ------------------------------ETFKEDVHYIRRLISLRKAHPAFRLRSAADIQRHLECLTL 636 (718)
T ss_dssp ------------------------------HHTHHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEEEEE
T ss_pred ------------------------------CCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCEEEECC
T ss_conf ------------------------------1357899999999999851955316862221261699328
No 8
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=675.30 Aligned_cols=501 Identities=24% Similarity=0.381 Sum_probs=368.8
Q ss_pred CCCCCCCEEECCE--EEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCCCC------CCC-EEEEEEE
Q ss_conf 9999952894992--69999969999089997408999997268841-469988999918999------984-7999999
Q 002787 206 YDGPLGALYAEET--VSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPKSW------EGC-YYVYEVS 275 (881)
Q Consensus 206 ~~~~LGa~~~~~~--vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~~~------~G~-~Y~y~V~ 275 (881)
...+|||++.+++ ++|+||||+|++|+|++|+.+.+..+...++| +..+|+|++.+++.. .|. +|+|+|.
T Consensus 3 ~~~~lGa~~~~~g~~~~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~ 82 (750)
T 1bf2_A 3 NSMSLGASYDAQQANITFRVYSSQATRIVLYLYSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYRAW 82 (750)
T ss_dssp STTCCEEEECTTSSEEEEEEECSSCSEEEEEEESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEEEE
T ss_pred CCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf 77689727958988799999999999899998726888865158845348899899997774444556899779999997
Q ss_pred E-ECC------------------CCCCC--CEEEECCCCCCCCCCCCC--------------------------CCEEEE
Q ss_conf 6-138------------------98632--302404855212445898--------------------------315860
Q 002787 276 V-YHP------------------SALQI--EKCYANDPYARGLSSDGR--------------------------RTLLVN 308 (881)
Q Consensus 276 v-~~p------------------~~g~~--e~~~vtDPYA~~ls~ng~--------------------------~s~vvD 308 (881)
. +.| ..|.. ...+++||||++++.+.. +|+|+|
T Consensus 83 g~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~s~v~~ 162 (750)
T 1bf2_A 83 GPNWPYASNWGKGSQAGFVSDVDANGDRFNPNKLLLDPYAQEVSQDPLNPSNQNGNVFASGASYRTTDSGIYAPKGVVLV 162 (750)
T ss_dssp BTTBCCCTTCCTTCCTTCCCSSCTTCCCCCTTSCBCCTTCSCBSCCSSCSSCCCGGGGBCSTTTTTCCCTTTSCCEECCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 66256554334466543111223457423777545686760443577775344431113443334566522366549968
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 99999898743322358998999998639999804410269999999775522100121013455889998798579937
Q 002787 309 LDSDTLKPEGWDKLVYEKPDILSFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLL 388 (881)
Q Consensus 309 l~~~~~~P~~W~~~~~~~P~~~~~~d~vIYElHVRdFs~~d~s~~~~~rG~y~gftek~s~~i~hL~~L~~lGvT~I~Ll 388 (881)
. .++|.. ..|. .+++++||||+|||+|+..+++++...+|+|++++++ |+||++||||+||||
T Consensus 163 ~------~~~W~d---~~~~-~~~~~~vIYe~hv~~f~~~~~~~~~~~~Gt~~gl~~~-------l~yLk~LGvt~V~L~ 225 (750)
T 1bf2_A 163 P------STQSTG---TKPT-RAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLK-------ASYLASLGVTAVEFL 225 (750)
T ss_dssp C------CCCCCC---CCCC-CCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHT-------HHHHHHHTCCEEEES
T ss_pred C------CCCCCC---CCCC-CCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHH-------HHHHHHCCCCEEEEC
T ss_conf 9------888776---7888-9965467999984185276999875678599999987-------899987698879988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 42346877853333333588987311366778642000003766630256540299998679999874138999998887
Q 002787 389 PTFQFAGVDDRKENWKSVGSLPGLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYN 468 (881)
Q Consensus 389 Pvfd~~ti~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYd 468 (881)
||+++.+.+.... .+ ......+|||+
T Consensus 226 Pi~~~~~~~~~~~-----------------------------------------~~-------------~~g~~~~wGY~ 251 (750)
T 1bf2_A 226 PVQETQNDANDVV-----------------------------------------PN-------------SDANQNYWGYM 251 (750)
T ss_dssp CCBCBSCTTTTSS-----------------------------------------TT-------------CCTTCCCSCCC
T ss_pred CCCCCCCCCCCCC-----------------------------------------CC-------------CCCCCCCCCCC
T ss_conf 8645765443323-----------------------------------------23-------------44666655757
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC-------CCCCCCC-CCCCEECCC
Q ss_conf 58688868999999999821799999999996519899998501345799999888-------8657778-987132399
Q 002787 469 PVLWGVPKGSYASNPNGSCRTIEFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDN-------SVLDKVV-PGYYLRRNS 540 (881)
Q Consensus 469 p~~y~apegsYgt~~~g~~ri~Efr~mV~alH~~GirVIlDVVyNHt~~~g~~~~~-------svlDk~v-P~YY~r~~~ 540 (881)
|.+|++|+++||+++++..|+.|||+||++||++||+||||||||||+..+++... ..+..+. +.||+....
T Consensus 252 ~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~~~d~~~~y~~~~~ 331 (750)
T 1bf2_A 252 TENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSG 331 (750)
T ss_dssp BSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBCTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 34056637011688887517999999999999889989999851665576533345555688744346789763478799
Q ss_pred CCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH------------------------HH
Q ss_conf 99501477-878887789689999999999999947800999847784418899------------------------99
Q 002787 541 DGFIEHST-CMNNTASEHYMVERLIIDDLLCWAVNYKVDGFRFDLMGHIMKSTM------------------------MK 595 (881)
Q Consensus 541 ~G~~~~st-c~~d~a~e~~mv~kliiDsl~~W~~eygIDGFRfDlm~h~~~~~~------------------------~~ 595 (881)
.+.+.+.+ |+++++++|++|+++|++++++|+++|||||||||+|+++++++| ..
T Consensus 332 ~~~~~~~~g~~~~ln~~~p~V~~~i~d~l~~W~~e~gvDGfR~D~a~~l~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~ 411 (750)
T 1bf2_A 332 NQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSNVA 411 (750)
T ss_dssp SSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCCSSSSCCTTSTTCTTCSCCBCTTCTTSH
T ss_pred CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97241577867720559989999999999999998397689996646537001101122234444455433000230489
Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99999810101467789720899602787521236677765344678884020256889976279999997532320123
Q 002787 596 AKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGL 675 (881)
Q Consensus 596 ~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~gtgig~fnDr~Rdavrgg~~F~~~~~qGf~~g~ 675 (881)
+.+++++ ++.+....+++++++||.|+.+.. .+|...++.+++.||+++|++++. |.+|+
T Consensus 412 ~~~~i~~-~~~~~~~~g~~~~liaE~w~~~~~--------~~~~~~F~~~~~~wn~~~rd~l~~-----------f~~g~ 471 (750)
T 1bf2_A 412 INRILRE-FTVRPAAGGSGLDLFAEPWAIGGN--------SYQLGGFPQGWSEWNGLFRDSLRQ-----------AQNEL 471 (750)
T ss_dssp HHHHHHH-SCBCCTTCCSSBEEEECCCCSSTT--------CCCTTCSCTTCEEECHHHHHHHHH-----------HHHCB
T ss_pred HHHHHHH-CCCHHHCCCCCCEEEECCCCCCCC--------CHHHCCCCCCHHHHHHHHHHHHHH-----------HHCCC
T ss_conf 9999996-840122157881699354557866--------013316780078874899999999-----------96477
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH
Q ss_conf 45899999997679999999988778863101100100024678621267433259998543589885178621156510
Q 002787 676 LLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTPVAYALCPTETISYVSAHDNET 755 (881)
Q Consensus 676 ~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~g~p~~ya~~P~~~INYVs~HDn~t 755 (881)
..+ .+........| .+... .|.. ....|..+||||+|||+.|
T Consensus 472 ~~~-----~~~~~~l~~~l-----------~~~~~------------------~y~~----~~~~p~~~vnfv~nHD~~~ 513 (750)
T 1bf2_A 472 GSM-----TIYVTQDANDF-----------SGSSN------------------LFQS----SGRSPWNSINFIDVHDGMT 513 (750)
T ss_dssp TTB-----CCCHHHHHHHH-----------TTCHH------------------HHGG----GTCCGGGEEECSCCSSSCC
T ss_pred CCC-----CCCHHHHHHHH-----------HCCHH------------------HHCC----CCCCCCEEEEEEECCCCCC
T ss_conf 778-----87899999875-----------46654------------------5335----7888210788744689986
Q ss_pred HHHHHCC-------------------------------------C---------------CEEEEECCCCCCCCCCCCCC
Q ss_conf 5544117-------------------------------------8---------------90158538422246899999
Q 002787 756 LFDVVSL-------------------------------------K---------------GIPFFHCGDEILRSKSLDRD 783 (881)
Q Consensus 756 L~D~l~~-------------------------------------k---------------GiPfiy~GdE~lrSks~drd 783 (881)
|+|++++ + |+||||||+|+++++.|++|
T Consensus 514 l~dl~s~~~~~n~~~~~~G~n~dG~~~n~s~n~g~~g~t~~~~~r~~~~r~a~a~ll~~~G~P~i~~GdE~g~t~~G~~n 593 (750)
T 1bf2_A 514 LKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTGAAVDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNN 593 (750)
T ss_dssp HHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSCCHHHHHHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSC
T ss_pred HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCC
T ss_conf 89887653021113321267778764433313445577405678999999999999974896013542623657788888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 99999986431377788998889998766788864446767999998512339999999999999781394333688788
Q 002787 784 SYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALENFSDVLRIRYSSPLFRLRTANA 863 (881)
Q Consensus 784 sY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~~ 863 (881)
+|++.+.+|+++|+.. .....+++++++||+|||++|+||.++...
T Consensus 594 ~y~~~~~i~~~dW~~~----------------------------------~~~~~l~~~~~~Li~lRk~~pal~~~~~~~ 639 (750)
T 1bf2_A 594 AYNLDSSANWLTYSWT----------------------------------TDQSNFYTFAQRLIAFRKAHPALRPSSWYS 639 (750)
T ss_dssp CTTCCSTTTSCCCCCC----------------------------------HHHHHHHHHHHHHHHHHHHCGGGSCSSCCC
T ss_pred CCCCCCCCCCCCCCCC----------------------------------CCCHHHHHHHHHHHHHHHHCHHHCCCCCCC
T ss_conf 6558886653577866----------------------------------443599999999999986491106775356
Q ss_pred HHCCCCC
Q ss_conf 8602322
Q 002787 864 IQVRRRH 870 (881)
Q Consensus 864 I~~~v~f 870 (881)
+. .+.+
T Consensus 640 ~~-~~~~ 645 (750)
T 1bf2_A 640 GS-QLTW 645 (750)
T ss_dssp TT-TEEE
T ss_pred CC-CEEE
T ss_conf 67-5799
No 9
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=1.00 E-value=1 Score=672.03 Aligned_cols=488 Identities=24% Similarity=0.407 Sum_probs=363.4
Q ss_pred CCCCCCCEE--ECCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCCCCCCCEEEEEEE-EECCCC
Q ss_conf 999995289--499269999969999089997408999997268841-4699889999189999847999999-613898
Q 002787 206 YDGPLGALY--AEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPKSWEGCYYVYEVS-VYHPSA 281 (881)
Q Consensus 206 ~~~~LGa~~--~~~~vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~~~~G~~Y~y~V~-v~~p~~ 281 (881)
...+|||++ .+++++|+||||+|++|+|++|+......+...++| +..+|+|++.+++...|.+|.|+|. .++|..
T Consensus 16 ~~~~lGa~~~~~~~g~~F~vwap~A~~V~l~lf~~~~~~~~~~~~~m~~~~~gvw~~~v~~~~~g~~Y~y~v~g~~~p~~ 95 (718)
T 2vr5_A 16 DPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVKNKTGDIWHVFVPGLRPGQLYAYRVYGPYKPEL 95 (718)
T ss_dssp CSCSSEEEEEGGGTEEEEEEECSSCSEEEEEECCSSCCSSCSEEEEECEESSSEEEEEEETCCTTCEEEEEEECCEETTT
T ss_pred CCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCC
T ss_conf 88799556961799699999999999889999838998774368858368799899996889999989999933237665
Q ss_pred CCC--CEEEECCCCCCCCCCCCC-----------------------------CCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 632--302404855212445898-----------------------------3158609999989874332235899899
Q 002787 282 LQI--EKCYANDPYARGLSSDGR-----------------------------RTLLVNLDSDTLKPEGWDKLVYEKPDIL 330 (881)
Q Consensus 282 g~~--e~~~vtDPYA~~ls~ng~-----------------------------~s~vvDl~~~~~~P~~W~~~~~~~P~~~ 330 (881)
|.. ...+++||||+++..+.. .|+|+|. .+.|+...|. ++...
T Consensus 96 g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d~-~~~W~~~~~~-----~~~~~ 169 (718)
T 2vr5_A 96 GLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVINP-YFEWDDEDFI-----KGKKV 169 (718)
T ss_dssp TEECCTTSCBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCCC-CCCCTTGGGG-----SSSCC
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CCCCCCCCCC-----CCCCC
T ss_conf 74147771675837400346766661002333577543233456665333541178557-7687765333-----57888
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99986399998044102699999997755221001210134558899987985799374234687785333333358898
Q 002787 331 SFSDISIYELHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLP 410 (881)
Q Consensus 331 ~~~d~vIYElHVRdFs~~d~s~~~~~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~ 410 (881)
+++++||||+|||+|+..+++.+...+|+|+|++++ . -|+||++||||+||||||+++...+.
T Consensus 170 ~~~~~vIYeihv~~f~~~~~~~~~~~~Gt~~gi~~~--~---~l~yLk~LGvt~I~L~Pi~~~~~~~~------------ 232 (718)
T 2vr5_A 170 PLKDTVIYEVHVKGFTKLRLDLPENIRGTYEGLASE--Q---MISYLKDLGITTVELMPVFHFIDQRF------------ 232 (718)
T ss_dssp CTTSCCEEEECTTTTTTTCTTSCTTSTTSHHHHTSH--H---HHHHHHHHTCCEEEECCCBCBCCCHH------------
T ss_pred CHHHCEEEEEECCHHHCCCCCCCCCCCCCHHHHHCC--H---HHHHHHHCCCCEEEEECCEECCCCCC------------
T ss_conf 825788999870322167999874667499998421--1---34999975998299737770676554------------
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 73113667786420000037666302565402999986799998741389999988875868886899999999982179
Q 002787 411 GLVFFGQNTFSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTI 490 (881)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~~ri~ 490 (881)
+.. .....+|||+|.+|++|+++|||+++++.|+.
T Consensus 233 -----------------------------~~~----------------~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~ 267 (718)
T 2vr5_A 233 -----------------------------LTD----------------KGLTNYWGYDPINFFSPECRYSSTGCLGGQVL 267 (718)
T ss_dssp -----------------------------HHT----------------TTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHH
T ss_pred -----------------------------CCC----------------CCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHH
T ss_conf -----------------------------323----------------57767667475447561764468977774299
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCCEECCCCC--CCCCC-CCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999965198999985013457999998888657778-98713239999--50147-7878887789689999999
Q 002787 491 EFRRMVQALNHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVV-PGYYLRRNSDG--FIEHS-TCMNNTASEHYMVERLIID 566 (881)
Q Consensus 491 Efr~mV~alH~~GirVIlDVVyNHt~~~g~~~~~svlDk~v-P~YY~r~~~~G--~~~~s-tc~~d~a~e~~mv~kliiD 566 (881)
|||+||++||++||+||||||||||+..+++.....+..+. +.||+ .++++ .+.+. .|++++|++|++|+++|+|
T Consensus 268 dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~-~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d 346 (718)
T 2vr5_A 268 SFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYM-LQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLD 346 (718)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBC-BCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE-ECCCCCCEEECCCCCCCEECCCCHHHHHHHHH
T ss_conf 99999999998799899995047555766668630115788876538-67999853415778667036799999999999
Q ss_pred HHHHHHHHCCCEEEEECCCCCCCHHHH-----HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999947800999847784418899-----999999981010146778972089960278752123667776534467
Q 002787 567 DLLCWAVNYKVDGFRFDLMGHIMKSTM-----MKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNL 641 (881)
Q Consensus 567 sl~~W~~eygIDGFRfDlm~h~~~~~~-----~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl 641 (881)
++++|+++|||||||||+|++++++++ ..+.+++++. .+ .++++++||.|+.++. .+|...
T Consensus 347 ~l~~W~~e~gvDGfR~D~~~~l~~~~~~~~~~~~~~~~i~~~-----~~-~~~~~liaE~w~~~~~--------~~~~~~ 412 (718)
T 2vr5_A 347 SLRYWVTEMHVDGFRFDLAAALARELYSVNMLNTFFIALQQD-----PI-LSQVKLIAEPWDVGQG--------GYQVGN 412 (718)
T ss_dssp HHHHHHHTTCCCEEEETTGGGGGBSSSSBCTTCHHHHHHHHC-----TT-GGGSEEEECCBCSSTT--------CBCTTC
T ss_pred HHHHHHHHCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHHC-----CC-CCCCEEEECCCCCCCC--------CCCCCC
T ss_conf 999999985988899751233100247742028999999858-----45-6783899445346777--------321367
Q ss_pred CCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf 88840202568899762799999975323201234589999999767999999998877886310110010002467862
Q 002787 642 SGTGIGSFNDRIRDAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNK 721 (881)
Q Consensus 642 ~gtgig~fnDr~Rdavrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~ 721 (881)
+...++.||+++|+++++ |.+|. .+....... .+.+...
T Consensus 413 f~~~~~~wn~~~r~~~~~-----------f~~g~--------~~~~~~~~~-----------~l~~~~~----------- 451 (718)
T 2vr5_A 413 FPYQWAEWNGKYRDSIRR-----------FWRGE--------ALPYSEIAN-----------RLLGSPD----------- 451 (718)
T ss_dssp SCTTEEEECHHHHHHHHH-----------HHHTC--------CEEHHHHHH-----------HHTTCHH-----------
T ss_pred CCHHHHHHHHHHHHHHHH-----------HHCCC--------CCHHHHHHH-----------HHHCCHH-----------
T ss_conf 761688871799999999-----------97379--------612999999-----------8754355-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCC---------------------------------------
Q ss_conf 12674332599985435898851786211565105544117---------------------------------------
Q 002787 722 VKGSEVKTYDGTPVAYALCPTETISYVSAHDNETLFDVVSL--------------------------------------- 762 (881)
Q Consensus 722 ~~G~~~~~y~g~p~~ya~~P~~~INYVs~HDn~tL~D~l~~--------------------------------------- 762 (881)
.|.. ....|..++||+++||+.||+|++++
T Consensus 452 -------~y~~----~~~~p~~~vnf~~~HD~~~l~dl~~~~~k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~ 520 (718)
T 2vr5_A 452 -------IYLG----NNKTPFASINYVTSHDGFTLEDLVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICR 520 (718)
T ss_dssp -------HHGG----GTCCGGGEEECSCCSSSCCHHHHSSCSSCCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHH
T ss_pred -------HHCC----CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf -------5324----57885605664412788889999887651023304433455445554322332677777788889
Q ss_pred --------------CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --------------890158538422246899999999999864313777889988899987667888644467679999
Q 002787 763 --------------KGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPS 828 (881)
Q Consensus 763 --------------kGiPfiy~GdE~lrSks~drdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~ 828 (881)
.|+||||||+|+|+++.|++|+|++.+.+|+++|+..
T Consensus 521 ~~~~r~a~a~ll~~~G~P~iy~GdE~G~~~~G~~~~y~~~~~~~~~~W~~~----------------------------- 571 (718)
T 2vr5_A 521 EKQKRNFMITLLVSQGTPMILGGDELSRTQRGNNNAFCQDNEITWFDWNLD----------------------------- 571 (718)
T ss_dssp HHHHHHHHHHHTTSSSEEEEETTTTTTCCCTTCSCCTTCCSTTTSCCCCCC-----------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCC-----------------------------
T ss_conf 999999999999748984898241430567898875457763445675545-----------------------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 9851233999999999999978139433368878
Q 002787 829 FKPQKSHILAALENFSDVLRIRYSSPLFRLRTAN 862 (881)
Q Consensus 829 ~~~~~~~~~~~~~~~k~Ll~lRksspalrlgt~~ 862 (881)
....+++++||+||+|||++|+|+.++..
T Consensus 572 -----~~~~~l~~~~~~Li~lRk~~pal~~~~~~ 600 (718)
T 2vr5_A 572 -----ERKSKFLEFVKKMIQFYRAHPAFRRERYF 600 (718)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHCGGGSCSSCC
T ss_pred -----CCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf -----33369999999999998649110367534
No 10
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=1.00 E-value=1 Score=663.98 Aligned_cols=488 Identities=25% Similarity=0.348 Sum_probs=361.6
Q ss_pred CCCCCCCEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEC-CCCCCEEEEECCCCCCCCEEEEEEEE-ECCCCCC
Q ss_conf 999995289499269999969999089997408999997268841-46998899991899998479999996-1389863
Q 002787 206 YDGPLGALYAEETVSLYLWAPTAQSVSACIYRDPLGGNPLEVVQL-KENDGVWSIKGPKSWEGCYYVYEVSV-YHPSALQ 283 (881)
Q Consensus 206 ~~~~LGa~~~~~~vtf~lWAPtA~~V~L~ly~~~~~~~~~~~~~M-~~~~GvWsv~i~~~~~G~~Y~y~V~v-~~p~~g~ 283 (881)
...+|||++.+++++|+||||+|++|+|++|+... ....++| +..+|+|++.+++...|.+|+|+|.. ++|..|.
T Consensus 8 ~~~~lGa~~~~~g~~F~vwap~A~~V~l~~f~~~~---~~~~~~m~~~~~g~w~~~v~~~~~g~~Y~y~v~~~~~p~~g~ 84 (657)
T 2wsk_A 8 KPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANG---QEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGH 84 (657)
T ss_dssp CSCSSSEEECSSEEEEEEECSSCSEEEEEEECTTC---CEEEEECCEEETTEEEEEEETCCTTCEEEEEEECCCCGGGTC
T ss_pred CCCCCCCEEECCEEEEEEECCCCCEEEEEEECCCC---CEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCC
T ss_conf 88898727969938999999999998999987999---778896867979989999798999998999992440676674
Q ss_pred C--CEEEECCCCCCCCCCCCC----------------------CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 2--302404855212445898----------------------3158609999989874332235899899999863999
Q 002787 284 I--EKCYANDPYARGLSSDGR----------------------RTLLVNLDSDTLKPEGWDKLVYEKPDILSFSDISIYE 339 (881)
Q Consensus 284 ~--e~~~vtDPYA~~ls~ng~----------------------~s~vvDl~~~~~~P~~W~~~~~~~P~~~~~~d~vIYE 339 (881)
. ...+++||||+++..+.. .|+|+|. +++|... ..|. .+++++||||
T Consensus 85 ~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d~------~~~W~~~--~~~~-~~~~~~vIYe 155 (657)
T 2wsk_A 85 RFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVD------HYDWEDD--APPR-TPWGSTIIYE 155 (657)
T ss_dssp CCCTTSCBCCTTCSCEESCCCCCGGGBCCSSSCCCCCCGGGSCEEECCCC------CCCCTTC--CCCC-CCGGGCCEEE
T ss_pred CCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC------CCCCCCC--CCCC-CCCHHCEEEE
T ss_conf 22662298286842035776566222454223455665334654289678------7787777--7888-9803557999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98044102699999997755221001210134558899987985799374234687785333333358898731136677
Q 002787 340 LHVRDFSVSDHTVHPDFRGGYLAFTLQNSAGVSHLKKLSNAGLTHVHLLPTFQFAGVDDRKENWKSVGSLPGLVFFGQNT 419 (881)
Q Consensus 340 lHVRdFs~~d~s~~~~~rG~y~gftek~s~~i~hL~~L~~lGvT~I~LlPvfd~~ti~e~~~~~~~~~~~~~~~~~~~~~ 419 (881)
+|||+|+..+++.+...+|+|.|++++ + -|+||++||||+||||||++++..+.
T Consensus 156 i~v~~F~~~~~~~~~~~~G~~~gi~~~--~---~l~yL~~LGvt~i~L~Pi~~~~~~~~--------------------- 209 (657)
T 2wsk_A 156 AHVKGLTYLHPEIPVEIRGTYKALGHP--V---MINYLKQLGITALELLPVAQFASEPR--------------------- 209 (657)
T ss_dssp ECHHHHHTTCTTSCGGGTTSHHHHTSH--H---HHHHHHHHTCCEEEESCCEEECCCHH---------------------
T ss_pred EECCEEECCCCCCCCCCCCCHHHHHCC--C---CHHHHHHCCCCEEEECCCCCCCCCCC---------------------
T ss_conf 974233124899874678699997463--0---01899973988799878540676544---------------------
Q ss_pred CCCCCEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 86420000037666302565402999986799998741389999988875868886899999999982179999999999
Q 002787 420 FSSWWIVCACGIKSFADAEVLEKLPPDSTEQQAQITAIQNDDGYNWGYNPVLWGVPKGSYASNPNGSCRTIEFRRMVQAL 499 (881)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~q~~~~~~~~~d~~nWGYdp~~y~apegsYgt~~~g~~ri~Efr~mV~al 499 (881)
+. ......+|||+|.+|++|+++||++|+ .++.|||+||++|
T Consensus 210 --------------------~~----------------~~g~~~~wGY~~~~y~~~~~~~G~~p~--~~~~d~~~lv~~~ 251 (657)
T 2wsk_A 210 --------------------LQ----------------RMGLSNYWGYNPVAMFALHPAYACSPE--TALDEFRDAIKAL 251 (657)
T ss_dssp --------------------HH----------------TTTCCCSSCCCEEEEEEECGGGCSSGG--GHHHHHHHHHHHH
T ss_pred --------------------CC----------------CCCCCCCCCCCCCCCCCCCHHHCCCCC--CCHHHHHHHHHHH
T ss_conf --------------------33----------------346656558674448788877768987--6799999999999
Q ss_pred HHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 6519899998501345799999888865777898713239999501477-878887789689999999999999947800
Q 002787 500 NHIGLHVVLDVVYNHLQGSGPFDDNSVLDKVVPGYYLRRNSDGFIEHST-CMNNTASEHYMVERLIIDDLLCWAVNYKVD 578 (881)
Q Consensus 500 H~~GirVIlDVVyNHt~~~g~~~~~svlDk~vP~YY~r~~~~G~~~~st-c~~d~a~e~~mv~kliiDsl~~W~~eygID 578 (881)
|++||+||||||||||+..+++.....+....+.+|++.+.+|.+.+.+ |++++|++|++|+++|+|++++|+++||||
T Consensus 252 H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e~gvD 331 (657)
T 2wsk_A 252 HKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVD 331 (657)
T ss_dssp HHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 98799899998515523566667522126899865257789998237888677536799999999999999999970984
Q ss_pred EEEECCCCCCCHHH-H---HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHH
Q ss_conf 99984778441889-9---9999999810101467789720899602787521236677765344678884020256889
Q 002787 579 GFRFDLMGHIMKST-M---MKAKHALHSLTKEIHGVDGSSIYIYGEGWDFGEVAKNGRGVNASQFNLSGTGIGSFNDRIR 654 (881)
Q Consensus 579 GFRfDlm~h~~~~~-~---~~~~~al~~i~pe~~~~~~~~iylyGEgWd~gev~~~~~~~~a~q~nl~gtgig~fnDr~R 654 (881)
|||||+|+++++++ + ..+.+++++. + + .++++++||.|+.++. .+|...++.+++.||+++|
T Consensus 332 GfR~D~~~~l~~~~~~~~~~~~~~~i~~~-~----~-~~~~~liaE~w~~~~~--------~~~~~~f~~~~~~~n~~~~ 397 (657)
T 2wsk_A 332 GFRFDLAAVMGRTPEFRQDAPLFTAIQNC-P----V-LSQVKLIAEPWDIAPG--------GYQVGNFPPLFAEWNDHFR 397 (657)
T ss_dssp EEEETTTHHHHBSSSBCTTCHHHHHHHHC-T----T-GGGSEEEECCBCSSTT--------CBCTTCSCTTEEEEEHHHH
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHC-C----C-CCCCEEEECCCCCCCC--------CCCCCCCCCCHHHHHHHHH
T ss_conf 89992534246544531148999999848-4----4-6894899732347887--------3203677731898718999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97627999999753232012345899999997679999999988778863101100100024678621267433259998
Q 002787 655 DAMLGGSPFGPPLQQGFVTGLLLQPNGHDHGTKAVEEQMLAAAKDHIQVGLAANLRDFQLTNSEGNKVKGSEVKTYDGTP 734 (881)
Q Consensus 655 davrgg~~F~~~~~qGf~~g~~~~~n~~~~g~~~~~~~~l~~~~d~i~~glaGnL~d~~~~~~~g~~~~G~~~~~y~g~p 734 (881)
+++++ |..|. .+........ +.+... .|...
T Consensus 398 ~~~~~-----------~~~g~--------~~~~~~~~~~-----------l~~~~~------------------~y~~~- 428 (657)
T 2wsk_A 398 DAARR-----------FWLHY--------DLPLGAFAGR-----------FAASSD------------------VFKRN- 428 (657)
T ss_dssp HHHHH-----------HHHTS--------CSCHHHHHHH-----------HBTTHH------------------HHSST-
T ss_pred HHHHH-----------HHCCC--------CCHHHHHHHH-----------HHCCHH------------------HHCCC-
T ss_conf 99999-----------96469--------8609999998-----------756554------------------53357-
Q ss_pred CCCCCCCCCCEEEEECCCCCHHHHHHCC----------------------------------------------------
Q ss_conf 5435898851786211565105544117----------------------------------------------------
Q 002787 735 VAYALCPTETISYVSAHDNETLFDVVSL---------------------------------------------------- 762 (881)
Q Consensus 735 ~~ya~~P~~~INYVs~HDn~tL~D~l~~---------------------------------------------------- 762 (881)
...|..++||+++||+.||+|++.+
T Consensus 429 ---~~~~~~~~nf~~~HD~~~l~dl~~~~~~~~~~~g~~~~~g~~~~~s~n~~~~g~~~~~~~~~~~~~~~r~~~a~ll~ 505 (657)
T 2wsk_A 429 ---GRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLL 505 (657)
T ss_dssp ---TCCGGGEEECSCCSSSCCHHHHTTCSSCCCGGGSSTTCSSCSCCCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf ---77823022253428987689999877322344254456775444320146546777666788999999999999987
Q ss_pred -CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf -8901585384222468999999999998643137778899888999876678886444676799999851233999999
Q 002787 763 -KGIPFFHCGDEILRSKSLDRDSYNSGDWLNRIDFSYNSNNWGVGLPPKEKNEKNWPLIRPRLADPSFKPQKSHILAALE 841 (881)
Q Consensus 763 -kGiPfiy~GdE~lrSks~drdsY~sgDw~N~~dw~~~~nn~~~Glp~~~~n~~~w~~i~~~~~~~~~~~~~~~~~~~~~ 841 (881)
.|+||||||+|+|+++.+++|+|++.+.+++++|+.. ..++++
T Consensus 506 ~~G~P~iy~GdE~G~~~~g~~~~y~~d~~~~~~~W~~~------------------------------------~~~l~~ 549 (657)
T 2wsk_A 506 SQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQA------------------------------------SSGLTA 549 (657)
T ss_dssp SBSEEEEETTTTTTCCCTTCSCCTTCCSTTTSCCGGGC------------------------------------CHHHHH
T ss_pred CCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCC------------------------------------CHHHHH
T ss_conf 15487787211222456898884236886674585512------------------------------------089999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHH-HCCCCCC
Q ss_conf 99999997813943336887888-6023222
Q 002787 842 NFSDVLRIRYSSPLFRLRTANAI-QVRRRHM 871 (881)
Q Consensus 842 ~~k~Ll~lRksspalrlgt~~~I-~~~v~f~ 871 (881)
+||+||+|||++|+|+.|+...+ ..++.+.
T Consensus 550 ~~~~Li~lRk~~pal~~g~~~~~~~~~v~~~ 580 (657)
T 2wsk_A 550 FTAALIHLRKRIPALVENRWWEEGDGNVRWL 580 (657)
T ss_dssp HHHHHHHHHTTCHHHHSCCCCCTTSSSEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
T ss_conf 9999999986490003675333677756998
Done!